{"meta":{"query_hash":"3ef81ca11908","filters":{"topic":"Microbial bioremediation and biosurfactants"},"cohort_total":1255,"direct_labels_cover":2,"predictions_cover":1255,"exported":1255,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/3ef81ca11908","api":"https://metacan.xera.ac/api/v1/cohort?topic=Microbial+bioremediation+and+biosurfactants"},"results":[{"id":"W102333662","doi":"10.1023/a:1015517308905","title":"Evaluation of a mixed bacterial culture for de-emulsification of water-in-petroleum oil emulsions","year":2002,"lang":"en","type":"article","venue":"World Journal of Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Acinetobacter calcoaceticus; Emulsion; Kerosene; Acinetobacter; Microbiology; Alcaligenes; Chemistry; Chromatography; Pseudomonas aeruginosa; Food science; Pseudomonas; Bacteria; Biology; Biochemistry; Organic chemistry; Antibiotics","score_opus":0.01713771500036444,"score_gpt":0.2344377482087956,"score_spread":0.21730003320843116,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W102333662","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975825,0.00026472314,0.000066922694,0.001715773,0.00018011252,0.000079298174,0.000032459462,0.0000037400937,0.000074480304],"genre_scores_gemma":[0.99820095,0.00037445512,0.0012480918,0.000032320415,0.000019980196,0.0000015270516,0.000011298166,0.0000033811605,0.00010798994],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99907005,0.00013883364,0.00044618748,0.00012185657,0.00006238499,0.00016070335],"domain_scores_gemma":[0.9994607,0.000029859342,0.00033352702,0.00008822841,0.00006287232,0.000024826224],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009801959,0.00008271934,0.00022854694,0.00017908614,0.00003127133,0.00000227956,0.00015224761,0.00025664966,0.00054979353],"category_scores_gemma":[0.00010156188,0.000056167322,0.000057109923,0.00013772148,0.0002935325,0.000044190365,0.00004481223,0.00014203957,0.000005790504],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007261828,0.00011051509,0.0017297191,0.000007861627,0.00001788884,4.6346713e-7,0.0001618208,0.000020396275,0.9808298,0.000031418655,0.0007415283,0.016275987],"study_design_scores_gemma":[0.0014845784,0.00025060712,0.00218953,0.000022120254,0.000059671944,0.00006735514,0.000061251005,0.00020966596,0.9850261,0.00017524925,0.01038371,0.00007012246],"about_ca_topic_score_codex":0.0000071791906,"about_ca_topic_score_gemma":0.00022350588,"teacher_disagreement_score":0.016205864,"about_ca_system_score_codex":0.00007198851,"about_ca_system_score_gemma":0.00000993283,"threshold_uncertainty_score":0.60198534},"labels":[],"label_agreement":null},{"id":"W10901261","doi":"10.1016/s0045-6535(99)00527-5","title":"槲皮素-H2O2-硼砂荧光光度法测定方法的研究","year":2009,"lang":"en","type":"article","venue":"食品研究与开发","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine","score_opus":0.004096853957844574,"score_gpt":0.1923836261880648,"score_spread":0.18828677223022022,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W10901261","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86923224,0.000020405905,0.000047768684,0.003362435,0.00022932964,0.00012587466,0.0000069314347,0.00009357373,0.12688145],"genre_scores_gemma":[0.9913073,0.000016142805,0.00057000783,0.0047705458,0.000058554015,4.822358e-7,0.000006504203,0.0000038238604,0.0032666267],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99934536,0.000015166663,0.00011172302,0.00017535494,0.0001612668,0.00019110502],"domain_scores_gemma":[0.99971235,0.0000071843915,0.000033703567,0.00015337257,0.0000045338184,0.0000888806],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000092254224,0.00008045321,0.00006919718,0.000013604669,0.00005936992,0.0000222217,0.00014788563,0.000051194398,0.009197637],"category_scores_gemma":[0.000026763664,0.00006693659,0.00003522075,0.00014372735,0.00004729444,0.00009338427,0.000032621043,0.00006059546,0.007780627],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015649759,0.00012595899,0.018129228,0.0000012983115,0.0000030748715,0.000010438294,0.00026189836,0.000017382257,0.7057512,0.00017716357,0.21417181,0.061334897],"study_design_scores_gemma":[0.00043810406,0.000117242416,0.42790818,0.0000053056815,0.0000067268925,0.0000072461057,0.00003077161,0.000111859874,0.06751948,0.0008098327,0.5027426,0.00030266508],"about_ca_topic_score_codex":0.000025655045,"about_ca_topic_score_gemma":0.000025540536,"teacher_disagreement_score":0.6382317,"about_ca_system_score_codex":0.000049484886,"about_ca_system_score_gemma":0.0000043459095,"threshold_uncertainty_score":0.9929919},"labels":[],"label_agreement":null},{"id":"W117768929","doi":"10.1007/978-3-662-06066-7_1","title":"Biotechnology and Bioremediation — An Overview","year":2004,"lang":"en","type":"book-chapter","venue":"Soil biology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo; Petro-Canada","funders":"","keywords":"Environmental chemistry; Hazardous waste; Bioremediation; Biodegradation; Environmental science; Contamination; Organic chemicals; Bioaccumulation; Chemistry; Waste management; Chemical industry; Environmental engineering; Organic chemistry; Ecology","score_opus":0.025867238046869818,"score_gpt":0.24832637218008277,"score_spread":0.22245913413321294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W117768929","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.25696787,0.008825961,0.000079970145,0.0086961305,0.0027520694,0.001988312,0.0010429432,0.0009997603,0.718647],"genre_scores_gemma":[0.8000673,0.07180756,0.0022050643,0.008015627,0.0009024873,0.00001906882,0.0027569386,0.00022900598,0.113996945],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99885345,0.00002297401,0.00025830112,0.000541701,0.00008605307,0.00023753352],"domain_scores_gemma":[0.99940133,0.000015124446,0.00018546244,0.00028727463,0.000007784568,0.00010302152],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00014230875,0.0002614446,0.00029144407,0.00007845997,0.000064569744,0.000011290017,0.0002029547,0.0010351136,0.005940446],"category_scores_gemma":[0.000019122113,0.00022445172,0.000052400785,0.00003787524,0.00061707443,0.00005884976,0.0002071913,0.00023687366,0.0015803052],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053674616,0.00009791095,0.0046582287,0.00006989618,0.00008825083,0.000026570595,0.00018595762,0.000008135278,0.3793613,0.38285208,0.0034304918,0.22916752],"study_design_scores_gemma":[0.00092422904,0.00074803206,0.004108,0.00006168313,0.00007557838,0.000040431318,0.00001068325,0.000022968068,0.012617455,0.15250845,0.82776207,0.0011204346],"about_ca_topic_score_codex":0.00014390887,"about_ca_topic_score_gemma":0.0005979996,"teacher_disagreement_score":0.8243316,"about_ca_system_score_codex":0.0001425899,"about_ca_system_score_gemma":0.000026493131,"threshold_uncertainty_score":0.99919707},"labels":[],"label_agreement":null},{"id":"W1210029886","doi":"10.1007/s00300-002-0400-0","title":"Natural attenuation of diesel-oil contamination in a subantarctic soil (Crozet Island)","year":2002,"lang":"en","type":"article","venue":"Polar Biology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":49,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Rimouski","funders":"","keywords":"Contamination; Diesel fuel; Environmental chemistry; Soil contamination; Hydrocarbon; Bioremediation; Environmental science; Biology; Ecology; Waste management; Chemistry","score_opus":0.010048395030814571,"score_gpt":0.2149480668288697,"score_spread":0.20489967179805513,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1210029886","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976944,0.00011520812,0.000013548822,0.00055126694,0.00015574401,0.000050811967,0.000024978694,0.000008728231,0.0013853611],"genre_scores_gemma":[0.99915254,0.0001320715,0.00005364115,0.0002104831,0.000018522454,0.0000015991247,0.000047595808,0.0000033458834,0.00038022106],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99936324,0.0000825632,0.00018394965,0.00015039979,0.000067359135,0.00015247353],"domain_scores_gemma":[0.99976754,0.000034800498,0.00008511062,0.00008196237,0.000008600074,0.000022013863],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015359833,0.000069580055,0.000107086584,0.00004425874,0.000024360901,0.0000036930974,0.00008990588,0.00007722989,0.0018389393],"category_scores_gemma":[0.00008027584,0.000057836416,0.000025266749,0.00015228229,0.00011420046,0.00006823475,0.000040289644,0.00007769431,0.00029170973],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011802353,0.00005157401,0.45232162,0.0000046633268,0.0000031883596,7.441511e-7,0.000403913,0.0000027626065,0.5381954,0.000032265652,0.00046209228,0.00850998],"study_design_scores_gemma":[0.0012712018,0.00016262039,0.94073194,0.000015056177,0.000009886895,0.000008859468,0.00007919405,0.002931176,0.047179956,0.00014827013,0.0072203446,0.00024150623],"about_ca_topic_score_codex":0.00089322415,"about_ca_topic_score_gemma":0.0064487304,"teacher_disagreement_score":0.49101543,"about_ca_system_score_codex":0.00007319226,"about_ca_system_score_gemma":0.000002520608,"threshold_uncertainty_score":0.9990735},"labels":[],"label_agreement":null},{"id":"W14145386","doi":"","title":"Remediation of a heavy metal and PAH-contaminated sediment by a rhamnolipid foam","year":2011,"lang":"en","type":"dissertation","venue":"Bulletin of the New York Academy of Medicine","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Environmental remediation; Contamination; Sediment; Rhamnolipid; Environmental chemistry; Environmental science; Aquatic ecosystem; Human decontamination; Waste management; Water column; Environmental engineering; Chemistry; Ecology; Geology; Engineering; Biology","score_opus":0.012905448764839582,"score_gpt":0.22852456448528385,"score_spread":0.21561911572044426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W14145386","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9710153,0.0040087663,0.0000043887103,0.014603497,0.00085032295,0.0012543593,0.00010981838,0.0000247717,0.008128797],"genre_scores_gemma":[0.9733165,0.001255803,0.0002867845,0.00088542956,0.00016263458,0.000006077264,0.00018288496,0.00003268736,0.023871182],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978432,0.00011671357,0.00083495793,0.00031680093,0.0006945195,0.0001938068],"domain_scores_gemma":[0.9982954,0.00008115535,0.0013144112,0.00016681847,0.000018950532,0.00012326121],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006274163,0.0002619726,0.0006038118,0.00006563927,0.000038154747,0.0000016483141,0.00043402825,0.00041177846,0.0052410658],"category_scores_gemma":[0.0002015783,0.00017331346,0.00009865437,0.00019807991,0.00040469025,0.000016779228,0.000088114226,0.00031392626,0.000024630785],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034558613,0.00008977511,0.001065152,0.00016273758,0.000069267946,1.2326409e-7,0.0014894278,6.2043733e-7,0.49676877,0.000024190473,0.49190742,0.008076936],"study_design_scores_gemma":[0.0023880035,0.0003663755,0.04388916,0.0007507665,0.0003545473,0.000003333993,0.00046060258,0.000005105879,0.75496584,0.00015500559,0.1964145,0.0002467607],"about_ca_topic_score_codex":0.0015660947,"about_ca_topic_score_gemma":0.000049928254,"teacher_disagreement_score":0.29549292,"about_ca_system_score_codex":0.000042170304,"about_ca_system_score_gemma":0.000022937125,"threshold_uncertainty_score":0.9956683},"labels":[],"label_agreement":null},{"id":"W1484213299","doi":"10.51847/nvpxyne","title":"10.51847/NVpxynE","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Diesel fuel; Bioremediation; Pollutant; Pollution; Environmental science; Environmental chemistry; Biodegradation; Soil contamination; Contamination; Petroleum; Bacteria; Pulp and paper industry; Chemistry; Waste management; Environmental engineering; Biology; Ecology; Engineering; Organic chemistry","score_opus":0.004159473885905426,"score_gpt":0.1602281775293729,"score_spread":0.15606870364346748,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1484213299","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.036685843,0.0000028011775,1.391006e-7,0.00034662415,0.0000021252843,0.00009277339,0.000010426377,0.000048899205,0.9628104],"genre_scores_gemma":[0.0048552635,3.4005825e-7,0.00011482821,0.0002868503,0.000027924492,0.0000012984528,0.0000075200583,0.0000062142517,0.9946998],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99945027,0.000015025592,0.00009124163,0.00015302579,0.00012968532,0.0001607502],"domain_scores_gemma":[0.99973637,0.0000072176304,0.000012934902,0.0001289979,0.0000022308413,0.000112226975],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00007511737,0.00006902137,0.000060724207,0.000011167264,0.000041397692,0.000015865255,0.0001359827,0.00003443797,0.99959993],"category_scores_gemma":[0.000008771199,0.000060365193,0.000022957893,0.00014602217,0.000033282486,0.000058737995,0.000038165326,0.000034015706,0.99839735],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020474054,0.000028124417,0.000007881858,4.350131e-7,0.0000016513707,0.0000014961159,0.000011852744,0.000033908873,0.022857057,7.1150595e-8,0.1282877,0.84874934],"study_design_scores_gemma":[0.0000947785,0.000037807145,0.0012215965,0.000001616315,0.0000022254142,0.0000016847544,2.118003e-7,0.0000390169,0.0010784955,4.80232e-7,0.99742854,0.00009354268],"about_ca_topic_score_codex":0.00002968788,"about_ca_topic_score_gemma":7.588917e-7,"teacher_disagreement_score":0.86914086,"about_ca_system_score_codex":0.00003935275,"about_ca_system_score_gemma":0.0000028620489,"threshold_uncertainty_score":0.24616212},"labels":[],"label_agreement":null},{"id":"W1497309636","doi":"10.1016/j.biotechadv.2006.08.001","title":"Physiological aspects","year":2006,"lang":"en","type":"review","venue":"Biotechnology Advances","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":467,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo; Thompson Rivers University","funders":"","keywords":"Biofilm; Swarming motility; Biodegradation; Chemistry; Antimicrobial; Amphiphile; Bacteria; Environmental chemistry; Biology; Quorum sensing; Organic chemistry","score_opus":0.024820140188615746,"score_gpt":0.2915120582084948,"score_spread":0.26669191801987907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1497309636","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000016344684,0.9947347,0.000023823408,0.000081974424,0.0002668497,0.00030641118,0.000038023172,0.00026487125,0.004266979],"genre_scores_gemma":[0.000027817088,0.99840045,0.0008705519,0.000054947686,0.00006961308,0.000013889047,0.00006758213,0.000015966663,0.00047919535],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985849,0.000055667486,0.00033837903,0.00056637847,0.00012545362,0.00032920507],"domain_scores_gemma":[0.99931973,0.000040208368,0.00027361192,0.00032472357,0.0000024274786,0.000039307375],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00007344025,0.0003261745,0.00076728157,0.00006491663,0.000079867445,0.000010325569,0.00053121394,0.0010015097,0.0013853525],"category_scores_gemma":[0.000057130615,0.0002184508,0.00019466743,0.0004328072,0.00055992906,0.00007420471,0.00028252386,0.0003863619,0.00473262],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[6.4450364e-7,0.000038843584,0.0000033545693,0.00022714102,0.0000071439085,0.000011622469,5.356617e-7,8.0301487e-7,0.00029265456,0.00019241247,0.0062805978,0.99294424],"study_design_scores_gemma":[0.000043907807,0.00003942414,0.000009558953,0.00019890335,0.0000394983,0.00001761506,0.0000010513693,4.241076e-7,0.00024899893,0.00030835252,0.99881685,0.00027540294],"about_ca_topic_score_codex":0.000010297143,"about_ca_topic_score_gemma":0.000045149183,"teacher_disagreement_score":0.99266887,"about_ca_system_score_codex":0.0001270994,"about_ca_system_score_gemma":0.00001547996,"threshold_uncertainty_score":0.9995275},"labels":[],"label_agreement":null},{"id":"W1504513023","doi":"10.1002/rem.21385","title":"Aerobic Biodegradation of Hydrocarbons in High Temperature and Saline Groundwater","year":2014,"lang":"en","type":"article","venue":"Remediation Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Waterloo","funders":"","keywords":"Microcosm; Biodegradation; Environmental chemistry; BTEX; Chemistry; Gasoline; Hydrocarbon; Contamination; Environmental science; Benzene; Ecology; Ethylbenzene; Organic chemistry; Biology","score_opus":0.0041104850548359636,"score_gpt":0.18594582378456428,"score_spread":0.18183533872972832,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1504513023","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99847585,0.000022564136,0.000088582616,0.0009998278,0.00018603797,0.000058662547,0.0000012426958,0.0000060127977,0.00016120396],"genre_scores_gemma":[0.9987306,0.0002062889,0.00068140985,0.00020282672,0.00009266755,4.4809397e-7,0.00001787491,0.000004725815,0.00006318075],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99921554,0.00008494593,0.0002746484,0.000107980915,0.00020384947,0.00011302079],"domain_scores_gemma":[0.9996803,0.000024836289,0.00015440979,0.00006356959,0.000007065624,0.00006981665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004864393,0.00007168978,0.00010231503,0.00007126382,0.000042481348,0.000026373376,0.00006515029,0.00006980064,0.0002561989],"category_scores_gemma":[0.00007466952,0.00005584359,0.00001921558,0.0001713961,0.00005131404,0.00019151162,0.00002146639,0.00012998407,0.000027732172],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019694835,0.00005645213,0.16770084,0.0000034688312,0.0000036803895,9.895772e-7,0.00023460774,0.000037748152,0.82514465,0.00005531634,0.001348479,0.0053940727],"study_design_scores_gemma":[0.00179506,0.00018484815,0.89311635,0.00003305752,0.000014633638,0.00004737361,0.00006283845,0.0010149865,0.09877393,0.0013946794,0.003329008,0.00023323866],"about_ca_topic_score_codex":0.000040821407,"about_ca_topic_score_gemma":0.00015497598,"teacher_disagreement_score":0.72637075,"about_ca_system_score_codex":0.000057769856,"about_ca_system_score_gemma":0.000008275861,"threshold_uncertainty_score":0.28051984},"labels":[],"label_agreement":null},{"id":"W1507694619","doi":"10.1002/047147844x.gw1526","title":"Phytoremediation Enhancement of Natural Attenuation Processes","year":2004,"lang":"en","type":"other","venue":"Water Encyclopedia","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Phytoremediation; Bioremediation; Rhizosphere; Environmental remediation; Environmental science; Phytoextraction process; Agronomy; Contamination; Biology; Hyperaccumulator; Soil water; Ecology; Soil science","score_opus":0.005182568126000497,"score_gpt":0.20424811190198885,"score_spread":0.19906554377598837,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1507694619","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04121249,0.00035492133,0.00017712793,0.0002674789,0.0023060024,0.0011270202,0.000095995245,0.00017229488,0.9542867],"genre_scores_gemma":[0.28486896,0.001512457,0.001186859,0.00019850137,0.0005749469,0.000025718315,0.00088399556,0.00020214038,0.71054643],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988094,0.000020092117,0.0002663954,0.00030026716,0.000381492,0.00022236956],"domain_scores_gemma":[0.9995476,0.0000056937124,0.00020548198,0.00017803514,0.000015432548,0.0000477735],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000084426676,0.00020654137,0.00019311633,0.00006663468,0.000020802281,0.000009796083,0.00018140748,0.0001607597,0.018875001],"category_scores_gemma":[0.000023803614,0.0001421118,0.000040709925,0.00013310132,0.000086642314,0.000076213146,0.00007880839,0.00009061182,0.0026682094],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028611865,0.00027393043,0.008475278,0.0004981694,0.000051944033,0.000004500891,0.0017108879,0.00001195894,0.29760858,0.0000052918817,0.6834358,0.00789505],"study_design_scores_gemma":[0.00040738774,0.00004431969,0.0014239972,0.000111534144,0.00003104887,7.374188e-7,0.000010534095,0.0000023660239,0.2433387,0.000052811105,0.7542365,0.0003400559],"about_ca_topic_score_codex":0.00025685926,"about_ca_topic_score_gemma":0.0007008882,"teacher_disagreement_score":0.24374025,"about_ca_system_score_codex":0.000121342644,"about_ca_system_score_gemma":0.000030486812,"threshold_uncertainty_score":0.9981083},"labels":[],"label_agreement":null},{"id":"W1511525882","doi":"10.1002/9781118989982.ch15","title":"Bioremediation of Oil Spills on Land","year":2014,"lang":"en","type":"other","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Bioremediation; Biostimulation; Environmental remediation; Bioaugmentation; Environmental science; Biodegradation; Contamination; Waste management; Environmental chemistry; Microorganism; Soil contamination; Petroleum; Environmental engineering; Soil water; Chemistry; Ecology; Soil science; Geology; Engineering","score_opus":0.005033278927345117,"score_gpt":0.19331084984103847,"score_spread":0.18827757091369335,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1511525882","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0033327446,0.0000073834985,0.000014774725,0.000086873144,0.00025258033,0.00005484717,0.000038624705,0.0000498939,0.9961623],"genre_scores_gemma":[0.028186131,0.00015813833,0.0003848941,0.0005011953,0.00015130694,0.0000010105124,0.00006498165,0.000083602594,0.97046876],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993527,0.000019948018,0.00013360973,0.00017796607,0.0002159372,0.000099843055],"domain_scores_gemma":[0.99960446,0.000011949729,0.00016358786,0.00017286463,0.0000020730226,0.000045073793],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000084538864,0.000115723364,0.0001421345,0.000050070357,0.000007904269,0.0000044699973,0.000117085496,0.00016530308,0.08430357],"category_scores_gemma":[0.000019221026,0.0000831289,0.0000366256,0.000076583055,0.00006409346,0.000009941701,0.000033856573,0.000047350077,0.008455452],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000408279,0.00003514787,0.0062541603,0.000014680733,0.0000054377124,2.45991e-7,0.000008379164,0.0000021240483,0.016202925,0.000019405617,0.96975636,0.0076970244],"study_design_scores_gemma":[0.00021583607,0.00004668163,0.0035450591,0.00003534818,0.000006553725,1.7745509e-7,0.0000012266437,0.000012677241,0.01001244,0.000004870495,0.9859726,0.00014655074],"about_ca_topic_score_codex":0.00034494183,"about_ca_topic_score_gemma":0.0007272307,"teacher_disagreement_score":0.07584812,"about_ca_system_score_codex":0.000025645346,"about_ca_system_score_gemma":0.0000038501685,"threshold_uncertainty_score":0.9923166},"labels":[],"label_agreement":null},{"id":"W1514600804","doi":"10.5772/35028","title":"Crude Oil Metagenomics for Better Bioremediation of Contaminated Environments","year":2012,"lang":"en","type":"book-chapter","venue":"InTech eBooks","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Environmental science; Seawater; Pollutant; Marine ecosystem; Marine life; Pollution; Petroleum; Bioremediation; Ecosystem; Biodiversity; Environmental chemistry; Microplastics; Contamination; Oceanography; Ecology; Geology; Chemistry; Biology","score_opus":0.018186743988098997,"score_gpt":0.2130174730501452,"score_spread":0.1948307290620462,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1514600804","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09665882,0.0004234238,0.0037331528,0.00030111943,0.0020844003,0.002413785,0.0022606952,0.00016715947,0.89195746],"genre_scores_gemma":[0.47547135,0.00016302233,0.0021016318,0.0007005139,0.00021615525,0.000030320301,0.0003462874,0.000112232476,0.52085847],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985344,0.000014735913,0.00052918185,0.00034413493,0.00029927804,0.00027827706],"domain_scores_gemma":[0.99899477,0.00005181869,0.0005143363,0.00031769607,0.0000130572635,0.000108350614],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00025526475,0.00031945857,0.00036389445,0.00007829337,0.000047065085,0.000012183945,0.00029292674,0.00044130412,0.002959426],"category_scores_gemma":[0.000019735411,0.00029480917,0.00019463387,0.0000102023205,0.00029007546,0.000053674765,0.00016535401,0.00018738794,0.00077805435],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033306256,0.000020404686,0.00012082598,0.000023184384,0.00006028159,8.632185e-7,0.00012364815,1.4332177e-7,0.9312271,0.00013256587,0.00068502885,0.067572676],"study_design_scores_gemma":[0.00031083106,0.000053625517,0.00013648551,0.000028180102,0.0000912533,0.0000012924767,0.0000042138213,0.0000029734024,0.5694174,0.0003839121,0.42931837,0.00025141644],"about_ca_topic_score_codex":0.000019714847,"about_ca_topic_score_gemma":0.0000437673,"teacher_disagreement_score":0.42863333,"about_ca_system_score_codex":0.00026167685,"about_ca_system_score_gemma":0.000013590012,"threshold_uncertainty_score":0.99999994},"labels":[],"label_agreement":null},{"id":"W1515780418","doi":"10.1111/j.1751-7915.2010.00203.x","title":"Hydrophobic substances induce water stress in microbial cells","year":2010,"lang":"en","type":"article","venue":"Microbial Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":137,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; Queen's University; Queen's University Belfast","keywords":"Chaotropic agent; Chemistry; Mechanism (biology); Hydrophobic effect; Macromolecule; Biophysics; Environmental chemistry; Biochemistry; Biology","score_opus":0.004491161146405652,"score_gpt":0.18853594590501455,"score_spread":0.1840447847586089,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1515780418","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99519116,0.000011505045,0.000007618039,0.002300309,0.0013127367,0.00032118498,0.00006734421,0.00014555157,0.0006425842],"genre_scores_gemma":[0.9981153,0.00004307599,0.00079105044,0.00046582075,0.00007917252,0.0000044388858,0.000039521237,0.00002454183,0.00043708866],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99799293,0.000049023503,0.00041969708,0.0006563592,0.00013189449,0.0007500809],"domain_scores_gemma":[0.99934465,0.000015778842,0.00009149789,0.00044990183,0.000009312282,0.000088834],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002422313,0.00028727326,0.00028239243,0.00018485973,0.00010929691,0.000042847787,0.00070640666,0.00087512314,0.0053902566],"category_scores_gemma":[0.000015900932,0.0002297472,0.00007437066,0.0004355327,0.0006902035,0.00014048743,0.00038322227,0.00085558166,0.0042417343],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029170995,0.00014644657,0.0033997982,0.0000050324397,0.000004156179,0.00002606719,0.00017934667,0.0000072330895,0.99202347,0.00002327549,0.0024261184,0.0017299075],"study_design_scores_gemma":[0.00057528465,0.000041781037,0.00094505225,0.0000072258485,0.000004542094,0.000022906543,0.000029922863,0.000008463771,0.9315957,0.000044340006,0.06640779,0.0003170039],"about_ca_topic_score_codex":0.0006097651,"about_ca_topic_score_gemma":0.013210059,"teacher_disagreement_score":0.063981675,"about_ca_system_score_codex":0.00011342888,"about_ca_system_score_gemma":0.000017442373,"threshold_uncertainty_score":0.9965336},"labels":[],"label_agreement":null},{"id":"W1520117469","doi":"10.1080/09593330801984480","title":"TRAITEMENT DE DECHETS D’ALUMINERIE CONTAMINES EN HAP PAR FLOTTATION EN PRESENCE DE SURFACTANTS AMPHOTERES","year":2008,"lang":"fr","type":"article","venue":"Environmental Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Chemistry; Forestry; Physics; Nuclear chemistry","score_opus":0.008361018012864185,"score_gpt":0.2134882091773688,"score_spread":0.20512719116450462,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1520117469","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99169546,0.0011523856,0.00064320484,0.0045840316,0.00050614023,0.00061225926,0.00028719864,0.00015434419,0.00036497932],"genre_scores_gemma":[0.9831339,0.0052942894,0.006610832,0.00047248707,0.000103938044,0.00003326233,0.00006723118,0.000049544327,0.004234483],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968284,0.00032122288,0.0005944815,0.00076735736,0.00043067435,0.0010578794],"domain_scores_gemma":[0.99885625,0.00015396281,0.00025036882,0.0004624693,0.000003881516,0.00027308424],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0004342114,0.00047616212,0.00038483914,0.00014741834,0.0003089762,0.00002948742,0.000673082,0.0008460824,0.008177946],"category_scores_gemma":[0.00014063413,0.00051446795,0.000118825126,0.0002969663,0.001816949,0.0003863856,0.0004169156,0.0004767661,0.0018117633],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035235138,0.00041345909,0.26083887,0.000015843847,0.0000367949,0.00015130197,0.0015590511,0.000114919785,0.7179744,0.00003941238,0.002369424,0.016451264],"study_design_scores_gemma":[0.0009431969,0.00030007522,0.37406906,0.000044378972,0.000041811145,0.00045966404,0.0008313654,0.0006663442,0.5779789,0.0002122507,0.04393994,0.0005130164],"about_ca_topic_score_codex":0.00045736122,"about_ca_topic_score_gemma":0.00041187057,"teacher_disagreement_score":0.13999555,"about_ca_system_score_codex":0.001627466,"about_ca_system_score_gemma":0.00006097866,"threshold_uncertainty_score":0.9997307},"labels":[],"label_agreement":null},{"id":"W1521580480","doi":"10.1007/978-3-540-89621-0_4","title":"Biosurfactants in Bioremediation","year":2009,"lang":"en","type":"book-chapter","venue":"Soil biology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Thompson Rivers University","funders":"","keywords":"Chemistry; Multicellular organism; Amphiphile; Biodegradation; Bioremediation; Aqueous solution; Nanotechnology; Amphiphilic molecule; Biochemical engineering; Organic chemistry; Materials science; Biochemistry; Bacteria; Biology; Cell","score_opus":0.011738303088615116,"score_gpt":0.22013752545496926,"score_spread":0.20839922236635414,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1521580480","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.050973233,0.0001780355,0.0000035546316,0.0007507407,0.00069867325,0.0003826807,0.00014964676,0.00008647493,0.946777],"genre_scores_gemma":[0.67940086,0.0020173078,0.00031906573,0.0025369353,0.00032917876,0.0000042301986,0.0008447343,0.000069328606,0.31447837],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.998481,0.000034994235,0.000437411,0.0005440212,0.00015303912,0.00034958805],"domain_scores_gemma":[0.99935055,0.000032898766,0.00023838821,0.00027219093,0.000009576467,0.000096383206],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00023744203,0.000316276,0.00036450065,0.00012681309,0.00003727972,0.0000113964,0.00027104636,0.00077037996,0.0082504675],"category_scores_gemma":[0.000034309774,0.00027988816,0.00009566538,0.00007399338,0.00023283766,0.000056428744,0.00011253438,0.00030587014,0.006213545],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017908764,0.00022083796,0.0676822,0.000029283792,0.00006942739,0.000097385615,0.00039535033,0.000048374408,0.39186525,0.009931555,0.03741998,0.49206126],"study_design_scores_gemma":[0.0011211941,0.00035994322,0.03648343,0.0000719718,0.00003140801,0.000011585445,0.0000074659515,0.0000563429,0.0064703743,0.027647616,0.9264474,0.001291251],"about_ca_topic_score_codex":0.00010888566,"about_ca_topic_score_gemma":0.0015584214,"teacher_disagreement_score":0.8890274,"about_ca_system_score_codex":0.0002658755,"about_ca_system_score_gemma":0.000028846604,"threshold_uncertainty_score":0.9999653},"labels":[],"label_agreement":null},{"id":"W1537423632","doi":"10.1159/000121326","title":"Diversity of the C-Terminal Portion of the Biphenyl Dioxygenase Large Subunit","year":2008,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Phylogenetic tree; Biphenyl; Bacteria; Enzyme; Context (archaeology); Stereospecificity; Stereochemistry; Chemistry; Dioxygenase; Biology; Biochemistry; Catalysis; Genetics; Gene; Organic chemistry","score_opus":0.01097868716413607,"score_gpt":0.18645941903857005,"score_spread":0.17548073187443397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1537423632","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991993,0.0000041920966,0.0000047210783,0.00011406693,0.00025061323,0.00013203332,0.00007246701,0.0000053406875,0.00021730637],"genre_scores_gemma":[0.9992862,0.000010545678,0.000015322015,0.00032350072,0.0000260748,3.0006268e-7,0.0000058159703,0.000003323369,0.00032894622],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993005,0.00010401275,0.0001817138,0.00014440012,0.000109666886,0.00015974554],"domain_scores_gemma":[0.99949974,0.000012097479,0.00020070125,0.00025020633,0.000013870657,0.000023415047],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000086702465,0.00008058989,0.00012857895,0.000010423778,0.0003591114,7.7975534e-7,0.0003905,0.000067606685,0.001079204],"category_scores_gemma":[0.00002007451,0.000046463934,0.00012043394,0.00018688789,0.00052495825,0.000041252642,0.0011210883,0.000086551736,0.000049487095],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030027199,0.0000944759,0.04885019,0.000004463675,0.0000048963293,6.218052e-7,0.00041114664,0.000012509185,0.94752455,0.000006900581,0.0030063628,0.000053839063],"study_design_scores_gemma":[0.0002131125,0.000018414952,0.62104315,0.0000035426704,0.000006008809,0.000008233442,0.000012419299,0.0000040472814,0.37681055,0.000023464529,0.0018122769,0.00004474753],"about_ca_topic_score_codex":0.0003527337,"about_ca_topic_score_gemma":0.00023556002,"teacher_disagreement_score":0.57219297,"about_ca_system_score_codex":0.00003378231,"about_ca_system_score_gemma":0.000016133341,"threshold_uncertainty_score":0.99983394},"labels":[],"label_agreement":null},{"id":"W1539314079","doi":"10.2166/wst.2002.0283","title":"Strategies for augmenting the pentachlorophenol degradation potential of UASB anaerobic granules","year":2002,"lang":"en","type":"article","venue":"Water Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; Biotechnology Research Institute","funders":"Michigan State University","keywords":"Pentachlorophenol; Bioaugmentation; Anaerobic exercise; Chemistry; Bioreactor; Biofilm; Granule (geology); Degradation (telecommunications); Anaerobic respiration; Pulp and paper industry; Biodegradation; Methanogenesis; Environmental chemistry; Biostimulation; Enrichment culture; Microbiology; Methane; Bacteria; Microorganism; Bioremediation; Biology","score_opus":0.011855707815484768,"score_gpt":0.2098970606889343,"score_spread":0.19804135287344954,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1539314079","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99407387,0.000017132406,0.002852989,0.0019855173,0.00017066246,0.0002741747,0.0000048334837,0.000056117955,0.00056473],"genre_scores_gemma":[0.99801755,0.000012149037,0.0016830132,0.00007788487,0.0000105560575,0.000009598496,0.000002929241,0.0000042072866,0.00018211543],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989433,0.000011707081,0.00020044958,0.00027306032,0.00022757007,0.00034386612],"domain_scores_gemma":[0.99962765,0.0000063554053,0.00008280579,0.00023373132,0.000023264149,0.000026209795],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032965184,0.00008984307,0.00008958663,0.00013102179,0.00035412677,0.0000579045,0.00065049215,0.00006328809,0.00066556333],"category_scores_gemma":[0.000017497354,0.00005098486,0.00003395287,0.00056680146,0.001433228,0.00033880555,0.00021061911,0.000065244734,0.0001215112],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000002768703,0.000028222366,0.0011304094,0.0000023441846,0.0000014099903,4.0416833e-7,0.0002717922,0.0000790955,0.992097,0.0005628901,0.0002058709,0.005617778],"study_design_scores_gemma":[0.00022588036,0.000098962075,0.0011621714,0.0000036442868,0.000009756219,0.000008210305,0.0010525965,0.0025404338,0.99053115,0.0019206135,0.0023352227,0.00011138497],"about_ca_topic_score_codex":0.000045009117,"about_ca_topic_score_gemma":0.000058638307,"teacher_disagreement_score":0.005506393,"about_ca_system_score_codex":0.00005269043,"about_ca_system_score_gemma":0.000007997924,"threshold_uncertainty_score":0.7287452},"labels":[],"label_agreement":null},{"id":"W1548594904","doi":"10.1002/rcm.6578","title":"Online methodology for determining compound‐specific hydrogen stable isotope ratios of trichloroethene and 1,2‐ <i>cis</i> ‐dichloroethene by continuous‐flow isotope ratio mass spectrometry","year":2013,"lang":"en","type":"article","venue":"Rapid Communications in Mass Spectrometry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada; Strategic Environmental Research and Development Program","keywords":"Chemistry; Isotope-ratio mass spectrometry; Mass spectrometry; Environmental chemistry; Isotope analysis; Volatile organic compound; Hydrogen; Analytical Chemistry (journal); Gas chromatography; Isotope; Detection limit; Gas chromatography–mass spectrometry; Chromatography; Organic chemistry","score_opus":0.036926934884292585,"score_gpt":0.275775935236296,"score_spread":0.23884900035200343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1548594904","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91124874,0.004004258,0.07453719,0.0035789912,0.00020767159,0.0028674398,0.00055066997,0.00012590046,0.002879107],"genre_scores_gemma":[0.6376556,0.0035109674,0.35780516,0.000304955,0.00003583173,0.00010500324,0.00026777294,0.00003987332,0.0002747939],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99658036,0.0006702858,0.0011384557,0.00062704936,0.00034636838,0.0006375],"domain_scores_gemma":[0.99626225,0.0013658958,0.0005723462,0.0015511143,0.000076625,0.00017175474],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001522678,0.00038459557,0.00079002255,0.0004045089,0.00027190018,0.00009991873,0.0013868485,0.00024089041,0.0029139132],"category_scores_gemma":[0.0002672,0.00038277838,0.00013643022,0.0014088951,0.0006203974,0.00044904804,0.00044355597,0.00045856583,0.00007633086],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005471472,0.0004404406,0.01595724,0.000021272897,0.000052058374,7.1623197e-7,0.00029833714,0.000046629862,0.97458285,0.00021697457,0.002767514,0.0055612307],"study_design_scores_gemma":[0.007058123,0.001528519,0.030975617,0.00010065167,0.00014799289,0.000050459457,0.0025779326,0.027331099,0.8816304,0.0079904795,0.03876952,0.0018391891],"about_ca_topic_score_codex":0.00021387124,"about_ca_topic_score_gemma":0.00014989027,"teacher_disagreement_score":0.28326797,"about_ca_system_score_codex":0.00032328046,"about_ca_system_score_gemma":0.000038735456,"threshold_uncertainty_score":0.99986243},"labels":[],"label_agreement":null},{"id":"W1553336161","doi":"10.1023/a:1025007729355","title":"Microbial degradation of high and low molecular weight polyaromatic hydrocarbons in a two-phase partitioning bioreactor by two strains of Sphingomonas sp.","year":2003,"lang":"en","type":"article","venue":"Biotechnology Letters","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":96,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Fluoranthene; Phenanthrene; Pyrene; Naphthalene; Sphingomonas; Chemistry; Bioreactor; Degradation (telecommunications); Biodegradation; Environmental chemistry; Microbial biodegradation; Benzopyrene; Chromatography; Organic chemistry; Benzo(a)pyrene; Microorganism; Bacteria; Biochemistry; Biology","score_opus":0.004441352824122526,"score_gpt":0.21412263501022724,"score_spread":0.2096812821861047,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1553336161","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969048,0.000027034383,0.00060891005,0.0021316577,0.000049849838,0.00017950413,0.000038288923,0.00002566947,0.00003428523],"genre_scores_gemma":[0.997422,0.000017243134,0.002155356,0.000358311,0.0000030033661,0.0000025068882,0.000028652017,0.0000089455525,0.0000040193067],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990562,0.000055976507,0.00031755847,0.00024910574,0.000111276946,0.0002098682],"domain_scores_gemma":[0.999587,0.000015694406,0.00018617601,0.00016979278,0.0000019707977,0.000039338713],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013626169,0.00013065625,0.00019097034,0.00011992882,0.000027291275,0.0000066235325,0.00012297482,0.0001182026,0.00009130082],"category_scores_gemma":[0.000043646047,0.00012879857,0.000031860953,0.0003180516,0.00045064648,0.000075645345,0.000039608305,0.00012310829,0.000010679136],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000784993,0.0001282243,0.0065270257,0.000006656719,0.0000094178,0.0000064068586,0.00004694578,0.00000642258,0.99220234,0.00024401523,0.00014661452,0.00066808565],"study_design_scores_gemma":[0.0014793451,0.000047120488,0.0024494831,0.000024398343,0.000012310161,0.0000089104315,0.000023274095,0.00008752797,0.9955547,0.00008966093,0.00009432891,0.00012893413],"about_ca_topic_score_codex":0.00058044156,"about_ca_topic_score_gemma":0.00020921286,"teacher_disagreement_score":0.004077542,"about_ca_system_score_codex":0.00006277537,"about_ca_system_score_gemma":0.000008489675,"threshold_uncertainty_score":0.5252253},"labels":[],"label_agreement":null},{"id":"W1557960902","doi":"10.1002/9780470686607.ch9","title":"Surfactants from Waste Biomass","year":2010,"lang":"en","type":"other","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biomass (ecology); Environmental science; Waste management; Biomass burning; Geography; Engineering; Ecology; Biology; Meteorology","score_opus":0.006437337849998352,"score_gpt":0.19815114277481605,"score_spread":0.19171380492481768,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1557960902","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.013619459,0.000025782192,0.000018087409,0.0001032401,0.0009844592,0.00017563553,0.00039778493,0.00019950222,0.98447603],"genre_scores_gemma":[0.012927053,0.000052882653,0.0018347763,0.00034137873,0.00023039443,0.0000010618621,0.00015097958,0.00019918654,0.9842623],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99895203,0.000020128698,0.00015169861,0.00039274356,0.00025738115,0.0002260425],"domain_scores_gemma":[0.99937516,0.000012464749,0.0001279904,0.00035398462,0.0000017394902,0.0001286372],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000054516546,0.0002273669,0.00018886244,0.000037672464,0.00002434197,0.000028508148,0.00031286123,0.00047723588,0.5706106],"category_scores_gemma":[0.000010783096,0.00017308963,0.000058181286,0.000109904955,0.000117981894,0.000030984535,0.00015847707,0.0001722171,0.032010995],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000016492696,0.000018764125,0.0028433776,0.000001453658,0.000008996144,0.00000293545,0.0000076240435,2.2180917e-8,0.27572605,0.0000012593022,0.71960866,0.0017792372],"study_design_scores_gemma":[0.00016384978,0.0000064934266,0.0011678685,0.000010524963,0.00000896464,4.4511367e-7,0.0000064180044,0.0000063970233,0.03407792,0.000014932209,0.96426475,0.00027144043],"about_ca_topic_score_codex":0.0072693992,"about_ca_topic_score_gemma":0.017407553,"teacher_disagreement_score":0.5385996,"about_ca_system_score_codex":0.00003291553,"about_ca_system_score_gemma":0.000008332646,"threshold_uncertainty_score":0.9993413},"labels":[],"label_agreement":null},{"id":"W1559832400","doi":"10.3389/fmicb.2015.00393","title":"Growth of Rhodococcus sp. strain BCP1 on gaseous n-alkanes: new metabolic insights and transcriptional analysis of two soluble di-iron monooxygenase genes","year":2015,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1780,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Monooxygenase; Biochemistry; Chemistry; Gene; Metabolism; Operon; Rhodococcus; Biology; Enzyme; Mutant; Cytochrome P450","score_opus":0.015059549048103053,"score_gpt":0.22641823110603965,"score_spread":0.2113586820579366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1559832400","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967526,0.001437998,0.0007062605,0.00009291025,0.00035805968,0.00022912449,0.00022964359,0.000007939408,0.00018546809],"genre_scores_gemma":[0.9950644,0.0003369075,0.0040211217,0.00015229141,0.00002225727,0.000002524,0.0002107926,0.000008775727,0.00018093857],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99873,0.00015579414,0.00042059497,0.00035819793,0.000090719484,0.00024468204],"domain_scores_gemma":[0.99947464,0.00002600111,0.00017746772,0.00016983668,0.000017947905,0.00013408806],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021861636,0.00018013178,0.0005077786,0.00029702057,0.0000243524,0.0000061491046,0.00020671173,0.00013471647,0.00031191797],"category_scores_gemma":[0.000027190876,0.00015310534,0.000102995175,0.00054721785,0.0003408642,0.00007659301,0.000051903728,0.00009284034,0.000015069502],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001267481,0.00011869982,0.11731175,0.0000057802795,0.000119311764,0.0000022109932,0.0008892672,0.0007089396,0.8763251,0.00009309323,0.002891668,0.0014074701],"study_design_scores_gemma":[0.0076647545,0.00080057496,0.3497281,0.00003524103,0.0009679501,0.000019309544,0.0010459571,0.0019181246,0.6148342,0.0014562212,0.020460065,0.0010694948],"about_ca_topic_score_codex":0.0009570582,"about_ca_topic_score_gemma":0.0011487253,"teacher_disagreement_score":0.26149085,"about_ca_system_score_codex":0.00007401853,"about_ca_system_score_gemma":0.00004352182,"threshold_uncertainty_score":0.6243454},"labels":[],"label_agreement":null},{"id":"W1564732284","doi":"10.1080/20015891109428","title":"Biodegradation of Diesel Fuel in Soil Under Various Nitrogen Addition Regimes","year":2001,"lang":"en","type":"article","venue":"Soil and Sediment Contamination An International Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Chemistry; Environmental chemistry; Nitrogen; Nitrate; Urea; Bioremediation; Ammonium sulfate; Diesel fuel; Biodegradation; Ammonium; Ammonium nitrate; Nutrient; Potassium sulfate; Potassium nitrate; Sulfate; Contamination; Potassium; Ecology; Organic chemistry","score_opus":0.011354797451642102,"score_gpt":0.23749380047030175,"score_spread":0.22613900301865963,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1564732284","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99457514,0.000033959208,0.0006498242,0.0012693361,0.0003689999,0.00008157279,0.000019790277,0.00001128687,0.0029900968],"genre_scores_gemma":[0.9981546,0.0006395565,0.00016872353,0.00041481375,0.000092971604,0.0000024860567,0.00010812106,0.0000058132764,0.0004129109],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998809,0.000079896054,0.000350193,0.00016760052,0.00046471038,0.0001286252],"domain_scores_gemma":[0.99950504,0.000026828577,0.00023666397,0.00006473122,0.00008289396,0.00008381862],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00037036662,0.00010292289,0.00010394677,0.00015420698,0.000060670365,0.0000673666,0.00015910433,0.00006529268,0.0016029978],"category_scores_gemma":[0.00003212182,0.00009241209,0.000037322327,0.00012029719,0.0000837009,0.0006382148,0.0000460106,0.00011401388,0.00003091588],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047250337,0.0011498615,0.7527805,0.0000112461385,0.00012874858,0.00006148495,0.0035087145,0.0010009111,0.09341301,0.00280492,0.0023513744,0.1423167],"study_design_scores_gemma":[0.003786156,0.00032084927,0.958571,0.000070711845,0.00002728856,0.00022915137,0.0013312763,0.0070663644,0.012627748,0.0074600377,0.00814556,0.00036382716],"about_ca_topic_score_codex":0.0002507443,"about_ca_topic_score_gemma":0.0007492222,"teacher_disagreement_score":0.20579052,"about_ca_system_score_codex":0.00021704256,"about_ca_system_score_gemma":0.000023258232,"threshold_uncertainty_score":0.99930966},"labels":[],"label_agreement":null},{"id":"W1565480507","doi":"10.1023/a:1011160004678","title":"Surfactant inhibition of bacterial growth on solid anthracene","year":2000,"lang":"en","type":"article","venue":"Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Anthracene; Pulmonary surfactant; Bioremediation; Chemistry; Bacterial growth; Biodegradation; Pseudomonas; Growth inhibition; Nuclear chemistry; Dilution; Environmental chemistry; Bacteria; Organic chemistry; Chromatography; Biochemistry; Cell growth; Biology","score_opus":0.009561871624866285,"score_gpt":0.21584930119572934,"score_spread":0.20628742957086305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1565480507","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942505,0.0000028772017,0.000016422619,0.000265394,0.00013084417,0.00013086697,0.00006902383,0.000028406095,0.0051056975],"genre_scores_gemma":[0.99899274,0.00008206447,0.0002782118,0.00011840407,0.000040809762,0.0000011395872,0.00020303708,0.000006134069,0.00027743916],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992003,0.00004162487,0.00022310582,0.00018663648,0.00021999079,0.00012836982],"domain_scores_gemma":[0.99972343,0.000013213147,0.00009176964,0.00011448474,0.000010391687,0.0000467232],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00012686999,0.00009480015,0.000098026365,0.000026058868,0.000051916257,0.000014528675,0.000060617767,0.000067791625,0.021157213],"category_scores_gemma":[0.000018582426,0.00008056115,0.000035707293,0.00016407801,0.00007436704,0.00016668299,0.000013876976,0.00004141839,0.0012056564],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010482567,0.00011810988,0.0025051353,0.0000031662116,0.0000026277671,6.716251e-7,0.00007138846,0.000014996095,0.97879416,0.000031771408,0.002973572,0.015379585],"study_design_scores_gemma":[0.00041724468,0.00013151907,0.0688794,0.0000134625725,0.0000055179744,0.0000011899393,0.000009769756,0.0001599805,0.92586696,0.000058631944,0.0043300116,0.0001262877],"about_ca_topic_score_codex":0.00011679485,"about_ca_topic_score_gemma":0.00004816746,"teacher_disagreement_score":0.06637427,"about_ca_system_score_codex":0.00006468833,"about_ca_system_score_gemma":0.0000072163466,"threshold_uncertainty_score":0.99957204},"labels":[],"label_agreement":null},{"id":"W1569777245","doi":"10.1002/9781118523063.ch18","title":"Surfactant Proteins and Natural Biofoams","year":2013,"lang":"en","type":"other","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Pulmonary surfactant; Biocompatibility; Chemistry; Biodegradation; Wetting; Nanotechnology; Chemical engineering; Materials science; Biophysics; Biochemistry; Organic chemistry; Biology","score_opus":0.004296177594023859,"score_gpt":0.18359299808339088,"score_spread":0.17929682048936701,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1569777245","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0068026246,0.00016309695,0.000008142792,0.00024713046,0.00027771515,0.0006192754,0.000028861306,0.00016107496,0.99169207],"genre_scores_gemma":[0.014339962,0.00015362613,0.001433443,0.00033244368,0.00005070844,0.000003612199,0.00001921406,0.00009183831,0.98357517],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992544,0.000016513723,0.00010503815,0.00028104646,0.0001576948,0.0001852987],"domain_scores_gemma":[0.9996752,0.0000045772636,0.00007777322,0.00015276572,0.0000016119008,0.00008805933],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000043472548,0.00017775827,0.00013962251,0.000029078494,0.00002356797,0.00003526866,0.000119112236,0.00017429741,0.14526133],"category_scores_gemma":[0.000007188966,0.00011924137,0.00002570325,0.000070041366,0.00013388677,0.000040482337,0.0001322323,0.0001047059,0.008653133],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000001195437,0.000015020353,0.0018765195,0.000008235071,0.0000074247882,0.0000014376967,0.0000125552215,1.8884572e-8,0.05037751,0.000024894425,0.9435666,0.004108551],"study_design_scores_gemma":[0.0001374638,0.00001604337,0.003561328,0.000016590164,0.0000047765534,0.0000030200406,0.0000070769493,0.00002634008,0.0025155486,0.0000067462033,0.993453,0.00025205343],"about_ca_topic_score_codex":0.0022983323,"about_ca_topic_score_gemma":0.0011484073,"teacher_disagreement_score":0.1366082,"about_ca_system_score_codex":0.000031066884,"about_ca_system_score_gemma":0.0000043243363,"threshold_uncertainty_score":0.9921187},"labels":[],"label_agreement":null},{"id":"W1580322818","doi":"10.1016/s0168-1656(02)00229-8","title":"The use of ATCC 43560 in the development of a two-phase partitioning bioreactor for the destruction of hexahydro-1,3,5-trinitro-1,3,5-s-triazine (RDX)","year":2002,"lang":"en","type":"article","venue":"Journal of Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada; U.S. Department of Defense","keywords":"Bioreactor; Biodegradation; Chemistry; Dissolution; Solvent; Aqueous two-phase system; Substrate (aquarium); Batch reactor; Chemical engineering; Aqueous solution; Enterobacter cloacae; Degradation (telecommunications); Pulp and paper industry; Chromatography; Organic chemistry; Catalysis","score_opus":0.06283751260107279,"score_gpt":0.278251847946367,"score_spread":0.2154143353452942,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1580322818","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960986,0.00011910888,0.0009898378,0.0023752516,0.00013975242,0.0002474528,0.000014090174,0.00000405558,0.000011900184],"genre_scores_gemma":[0.99491674,0.0002946314,0.0047006346,0.000044416665,0.000023283212,0.0000030478761,0.0000010672472,0.0000049633263,0.000011241626],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99858516,0.00007360569,0.00083250116,0.00009311513,0.00024729394,0.00016834408],"domain_scores_gemma":[0.99840236,0.00037469316,0.0009599134,0.00020381235,0.000037400743,0.00002183245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008222467,0.00009318901,0.00020468899,0.00009861275,0.000102128586,0.000010970477,0.000400552,0.00012748531,0.000095133204],"category_scores_gemma":[0.00033066762,0.000045909117,0.000093925424,0.00041974246,0.000444018,0.00010201219,0.000060919967,0.00020503862,0.0000035051908],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013979171,0.00021705632,0.0035115243,0.0000075675725,0.000035210818,0.0000011725023,0.00059321424,0.00009274066,0.962855,0.0001288781,0.0005062946,0.031911593],"study_design_scores_gemma":[0.0022431365,0.00045721963,0.01023255,0.000044230357,0.00004372353,0.000055181186,0.0006580444,0.00088812126,0.9700975,0.00020031157,0.014986626,0.00009338306],"about_ca_topic_score_codex":0.000022133176,"about_ca_topic_score_gemma":0.00021418958,"teacher_disagreement_score":0.031818207,"about_ca_system_score_codex":0.00006436622,"about_ca_system_score_gemma":0.000022006054,"threshold_uncertainty_score":0.18721195},"labels":[],"label_agreement":null},{"id":"W1582060442","doi":"10.1111/j.1462-2920.2011.02521.x","title":"Massive dominance of <i>Epsilonproteobacteria</i> in formation waters from a Canadian oil sands reservoir containing severely biodegraded oil","year":2011,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":134,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Nexen (Canada); University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Natural Environment Research Council; Sight Research UK","keywords":"Biology; 16S ribosomal RNA; Dominance (genetics); Temperature gradient gel electrophoresis; Phylotype; Library; Environmental DNA; Oil sands; Metagenomics; Microbiology; Ribosomal RNA; Bacteria; Ecology; Genetics; Gene; Biodiversity","score_opus":0.011581298625377599,"score_gpt":0.17332707571934913,"score_spread":0.16174577709397153,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1582060442","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967307,0.00003798307,0.0000046958344,0.00014681023,0.00016863745,0.000098130025,0.0007708171,0.000010694702,0.0020315251],"genre_scores_gemma":[0.99752516,0.00012829009,0.0010867711,0.0004166877,0.000012179551,0.000011778052,0.00054517336,0.000014457988,0.00025952558],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985107,0.00013105327,0.00045623872,0.00038267404,0.00006580008,0.00045349819],"domain_scores_gemma":[0.9993914,0.00002181449,0.00022063043,0.00023065244,0.0000020006962,0.00013349576],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016729196,0.00021920759,0.00027454147,0.00008127198,0.00006997411,0.000007497154,0.0002994841,0.0002187767,0.004500115],"category_scores_gemma":[0.000011233122,0.00019949295,0.00006161801,0.000111889836,0.00037190365,0.00022751077,0.00014818342,0.00015498298,0.00061421184],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001983902,0.00006389409,0.07972638,0.0000045746665,0.00000910666,0.0000131652905,0.0019233556,0.0000057954458,0.9160579,0.0000017265899,0.00026190252,0.0017338509],"study_design_scores_gemma":[0.0016051066,0.0001725706,0.20023514,0.000043484128,0.000012523175,0.000017898097,0.0005360903,0.000023215547,0.7889951,0.00002902678,0.007948274,0.00038154874],"about_ca_topic_score_codex":0.058095902,"about_ca_topic_score_gemma":0.05241488,"teacher_disagreement_score":0.12706274,"about_ca_system_score_codex":0.0005435999,"about_ca_system_score_gemma":0.000019165962,"threshold_uncertainty_score":0.9964099},"labels":[],"label_agreement":null},{"id":"W1586993494","doi":"10.1111/j.1472-765x.2010.02897.x","title":"Microaerophilic degradation of hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) by three Rhodococcus strains","year":2010,"lang":"en","type":"article","venue":"Letters in Applied Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Biotechnology Research Institute","funders":"","keywords":"Library science; Research council; Philosophy; Government (linguistics); Computer science","score_opus":0.005411548401968357,"score_gpt":0.19343204747295617,"score_spread":0.1880204990709878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1586993494","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99632007,0.000012750677,0.00029034322,0.0011984555,0.00034469174,0.00049714994,0.00016522637,0.000038807095,0.0011325122],"genre_scores_gemma":[0.9940405,0.000013788555,0.0033655574,0.0021378454,0.000051619987,0.000013106944,0.00029963572,0.000022122891,0.00005581956],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982928,0.000051933854,0.0005548183,0.0005328798,0.00009097278,0.00047658102],"domain_scores_gemma":[0.999224,0.000063880514,0.00025504647,0.000371663,0.000006677979,0.000078746714],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00034098,0.0002640348,0.0003488341,0.00010587852,0.000053566157,0.000012906883,0.00046763103,0.0002943942,0.0017813898],"category_scores_gemma":[0.000026319729,0.0002452207,0.00007198525,0.0003552636,0.000561416,0.000053715386,0.00016950748,0.00045487657,0.0004512751],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004435636,0.000115258576,0.012035523,0.00000721531,0.000010355362,0.0000023548655,0.000059062422,0.000013096081,0.9774007,0.00006877141,0.007658554,0.0025847508],"study_design_scores_gemma":[0.0014443392,0.00003800405,0.012252836,0.000004873492,0.000011066518,0.000017124004,0.000013618754,0.0000132457335,0.97115874,0.000079044636,0.014630483,0.0003366463],"about_ca_topic_score_codex":0.00014194837,"about_ca_topic_score_gemma":0.0010862481,"teacher_disagreement_score":0.0069719297,"about_ca_system_score_codex":0.000086185304,"about_ca_system_score_gemma":0.000013266215,"threshold_uncertainty_score":0.9999809},"labels":[],"label_agreement":null},{"id":"W1587590605","doi":"10.1111/j.1574-6941.2006.00077.x","title":"Microbial oxidation of 1,2-dichloroethane under anoxic conditions with nitrate as electron acceptor in mixed and pure cultures","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; University of Toronto","keywords":"Anoxic waters; Nitrate; Microcosm; Electron acceptor; Environmental chemistry; Biology; Nitrite; Enrichment culture; Denitrification; Biodegradation; Electron donor; Mineralization (soil science); Denitrifying bacteria; Betaproteobacteria; Microbiology; Bacteria; Chemistry; Nitrogen; Ecology; Biochemistry; Organic chemistry","score_opus":0.0035016242222027545,"score_gpt":0.21118305354946668,"score_spread":0.2076814293272639,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1587590605","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981401,0.00003534217,0.000008437308,0.00066239556,0.00013004527,0.0003298859,0.000075461954,0.00002184523,0.0005964925],"genre_scores_gemma":[0.9982561,0.000028276909,0.0001814539,0.00048885035,0.000028288821,0.000009507859,0.00054524286,0.000010597005,0.00045166907],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99879295,0.00014460823,0.0003059519,0.00036229216,0.000034353223,0.00035987044],"domain_scores_gemma":[0.9995841,0.00005368755,0.00018850222,0.00011471683,0.000018186236,0.000040825744],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001448369,0.00017732197,0.0002595377,0.00008804996,0.00007137563,0.000009871407,0.00013517858,0.0003010313,0.0020974353],"category_scores_gemma":[0.000014566492,0.00014535847,0.00002930273,0.00021709953,0.0005920852,0.00010246358,0.00006618179,0.00015974668,0.00017014527],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011895256,0.00012714925,0.059867617,0.000003910279,0.000012795901,0.0000040399727,0.000058829657,0.000052264957,0.93560016,0.00011977423,0.0040151887,0.000019290179],"study_design_scores_gemma":[0.0010628666,0.00027431775,0.33401507,0.0000042312467,0.000014333182,0.00010186226,0.000061135994,0.0000017173734,0.66309845,0.00035262314,0.0008551626,0.0001582143],"about_ca_topic_score_codex":0.00040411475,"about_ca_topic_score_gemma":0.020802826,"teacher_disagreement_score":0.27414745,"about_ca_system_score_codex":0.000111545116,"about_ca_system_score_gemma":0.000035527675,"threshold_uncertainty_score":0.99881476},"labels":[],"label_agreement":null},{"id":"W1593893579","doi":"10.1080/15320380590911823","title":"Modeling the Kinetics of Contaminant Biodegradation by a Mixed Microbial Consortium Based on Carbon Mass Balance","year":2005,"lang":"en","type":"article","venue":"Soil and Sediment Contamination An International Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Polytechnique Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; University of Aberdeen","keywords":"Microcosm; Biodegradation; Chemistry; Environmental chemistry; Hexadecane; Population; Bacterial growth; Biomass (ecology); Microbial consortium; Carbon dioxide; Mineralization (soil science); Microbial population biology; Microorganism; Bacteria; Ecology; Biology; Organic chemistry","score_opus":0.008204895528381013,"score_gpt":0.22038448505650915,"score_spread":0.21217958952812813,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1593893579","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9874569,0.000021880796,0.006984873,0.0035775804,0.0005321052,0.00013507676,0.000046989167,0.000011184935,0.0012333823],"genre_scores_gemma":[0.9979957,0.00007940895,0.0004602504,0.0011029474,0.000125696,0.00000245315,0.00006361644,0.000007318975,0.00016263413],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9986471,0.00010367477,0.00038477028,0.00018095822,0.00054318365,0.00014032196],"domain_scores_gemma":[0.99945366,0.000038823913,0.00023064921,0.000094715135,0.00010004789,0.00008212775],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003941706,0.0001277205,0.00011069144,0.00006351716,0.00008039304,0.000080006015,0.00023585677,0.000061586834,0.0002596761],"category_scores_gemma":[0.00003973403,0.000093127,0.000043546876,0.00006298764,0.000104328756,0.00019281068,0.000028174723,0.00014038112,0.000009368757],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021894513,0.00039071665,0.012618958,0.0000030868932,0.000034320397,0.00000305518,0.00040481152,0.007906609,0.94048923,0.00014774673,0.0009952079,0.036787286],"study_design_scores_gemma":[0.0021218963,0.0002954985,0.009753333,0.00003688423,0.000023456343,0.000017471746,0.0001770534,0.7785137,0.20427111,0.000031167077,0.0045640687,0.00019432748],"about_ca_topic_score_codex":0.00007706509,"about_ca_topic_score_gemma":0.000119049204,"teacher_disagreement_score":0.7706071,"about_ca_system_score_codex":0.00019545585,"about_ca_system_score_gemma":0.000018375511,"threshold_uncertainty_score":0.37976086},"labels":[],"label_agreement":null},{"id":"W1595408397","doi":"","title":"Simultaneous Biosurfactant Production and Hydrocarbon Biodegradation by the Resident Aerobic Bacterial Flora of Oil Production Skimmer Pit at Elevated Temperature and Saline Conditions","year":2012,"lang":"en","type":"article","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Pseudomonas stutzeri; Bioremediation; Food science; Halotolerance; Pseudomonas; Microbiology; Biodegradation; Chemistry; Aerobic denitrification; Biology; Environmental chemistry; Salinity; Bacteria; Contamination; Ecology","score_opus":0.005963834858663106,"score_gpt":0.20307823369108993,"score_spread":0.19711439883242682,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1595408397","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966938,0.00011311037,9.748286e-7,0.0022293953,0.00051594153,0.0002753734,0.00005248652,0.00003535068,0.00008358309],"genre_scores_gemma":[0.996654,0.00037471874,0.00008664865,0.0000880558,0.00012538467,0.0000051663396,0.00022720074,0.000011261032,0.002427613],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99885035,0.00009916278,0.00028993137,0.00031793021,0.00022822531,0.00021442525],"domain_scores_gemma":[0.99949485,0.000034207736,0.00016336539,0.00019428857,0.000025681855,0.00008758258],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002699286,0.00016532902,0.00013587868,0.000030584535,0.00021716223,0.000030927997,0.00006217017,0.00010702735,0.0007303189],"category_scores_gemma":[0.00016450533,0.0001080464,0.000021146256,0.00023176917,0.00027240044,0.00030592203,0.000077352495,0.00009173117,0.000036371333],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007554652,0.000070771726,0.0071113794,0.000010597909,0.000011571508,1.3764085e-7,0.0003240344,0.000020594822,0.9847982,0.0000034630564,0.0071431766,0.00043051108],"study_design_scores_gemma":[0.00023159594,0.000058403773,0.019633051,0.00001546512,0.000036738562,0.000030555962,0.0001264145,0.0000800812,0.97694415,0.000004729733,0.0026660461,0.00017277972],"about_ca_topic_score_codex":0.00021634113,"about_ca_topic_score_gemma":0.0003313927,"teacher_disagreement_score":0.012521671,"about_ca_system_score_codex":0.00009936638,"about_ca_system_score_gemma":0.0000070001465,"threshold_uncertainty_score":0.799648},"labels":[],"label_agreement":null},{"id":"W1598195467","doi":"10.1111/j.1462-2920.2009.02150.x","title":"Chloroform respiration to dichloromethane by a <i>Dehalobacter</i> population","year":2010,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":107,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Strategic Environmental Research and Development Program; Natural Sciences and Engineering Research Council of Canada; U.S. Department of Defense","keywords":"Dehalogenase; Reductive dechlorination; Dehalococcoides; Dichloromethane; Biology; Electron acceptor; Chloroform; Population; Environmental chemistry; Biodegradation; Organic chemistry; Ecology; Bacteria; Chemistry; Biochemistry","score_opus":0.0024884292830628877,"score_gpt":0.1858518981987017,"score_spread":0.18336346891563882,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1598195467","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973848,0.000007797188,0.00004482339,0.0005424358,0.00051106344,0.0003715588,0.0002600132,0.000047137302,0.00083041046],"genre_scores_gemma":[0.99484277,0.000009194068,0.0008391856,0.0022967232,0.00006581211,0.000011407689,0.0008971726,0.00001919469,0.0010185507],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987194,0.00004502902,0.00029616855,0.0004731196,0.00009445632,0.0003718587],"domain_scores_gemma":[0.9994262,0.000021815698,0.00010284253,0.00027042133,0.0000012747519,0.00017747591],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002095501,0.00020398689,0.00016389361,0.000040548024,0.000116626565,0.000020975229,0.00023927908,0.00020752648,0.011539988],"category_scores_gemma":[0.000024581215,0.00018752177,0.000054375974,0.00012857394,0.00014730412,0.00015975678,0.00020338061,0.00021216378,0.006546963],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003138563,0.000086822125,0.06872473,8.1288255e-7,0.000003832916,8.8563024e-7,0.00006865881,0.0000030695082,0.9182046,0.000004372238,0.008888709,0.0039821174],"study_design_scores_gemma":[0.00044972586,0.00016621014,0.17464024,0.000002105531,0.000008425061,0.0000338133,0.000017243787,0.00000590883,0.5472655,0.000021580727,0.2770497,0.00033955532],"about_ca_topic_score_codex":0.00017333419,"about_ca_topic_score_gemma":0.0003708536,"teacher_disagreement_score":0.3709391,"about_ca_system_score_codex":0.00016172079,"about_ca_system_score_gemma":0.0000025127536,"threshold_uncertainty_score":0.9942266},"labels":[],"label_agreement":null},{"id":"W1603368733","doi":"10.51847/ci2ncl9","title":"10.51847/Ci2ncl9","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Carbazole; Magnetite; Nanoparticle; Degradation (telecommunications); Bacteria; Biodegradation; Pseudomonas; Scanning electron microscope; Chemistry; Magnetite Nanoparticles; Nuclear chemistry; Bacterial cell structure; Chemical engineering; Materials science; Microbiology; Nanotechnology; Magnetic nanoparticles; Organic chemistry; Metallurgy; Biology; Composite material","score_opus":0.004207468535777256,"score_gpt":0.16086310518928773,"score_spread":0.15665563665351048,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1603368733","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03157733,0.0000026391606,1.4197063e-7,0.0003088748,0.000002259684,0.00009164371,0.000010028934,0.000049596412,0.9679575],"genre_scores_gemma":[0.0048982156,3.0504955e-7,0.00011805709,0.00028603736,0.000028078024,0.0000013356482,0.0000072816183,0.0000062905233,0.9946544],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99944526,0.000015331727,0.000091423324,0.00015490271,0.00013095478,0.00016210748],"domain_scores_gemma":[0.99973255,0.000007160255,0.0000129807695,0.0001326342,0.0000022760628,0.00011242165],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00007382201,0.00006982815,0.000060254697,0.000011222222,0.000044203967,0.000017009652,0.00014015858,0.000034115124,0.99959207],"category_scores_gemma":[0.000008494308,0.00006109042,0.000023886672,0.00014238637,0.000033160777,0.000059736554,0.00004012026,0.000033096123,0.9984179],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020397638,0.000028115532,0.0000084291105,4.35477e-7,0.0000016808805,0.0000015458064,0.000012995127,0.000038011825,0.01829755,8.0715616e-8,0.1466498,0.83494097],"study_design_scores_gemma":[0.00009069185,0.00003665803,0.0011630469,0.0000015876311,0.0000021738983,0.0000016766403,2.285047e-7,0.000042774092,0.0009036693,5.285707e-7,0.99766195,0.00009500916],"about_ca_topic_score_codex":0.000031558273,"about_ca_topic_score_gemma":8.172823e-7,"teacher_disagreement_score":0.8510122,"about_ca_system_score_codex":0.000040536674,"about_ca_system_score_gemma":0.0000030548833,"threshold_uncertainty_score":0.24911948},"labels":[],"label_agreement":null},{"id":"W1606539915","doi":"","title":"Biosurfactant Production by Rhodococcus Erythropolis Sp. SB-1A Isolated from North Atlantic Ocean: Study on the Influence of Environmental Conditions","year":2014,"lang":"en","type":"article","venue":"The Journal of Macrodynamic Analysis (Memorial University of Newfoundland)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Salinity; Seawater; Rhodococcus; Environmental science; Nitrogen; Chemistry; Environmental chemistry; Agar plate; Strain (injury); Contamination; Food science; Bacteria; Biology; Ecology; Organic chemistry; Enzyme","score_opus":0.005060449258505813,"score_gpt":0.18874039785341318,"score_spread":0.18367994859490736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1606539915","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986695,0.0000056930717,0.0001686839,0.0004962848,0.00018228458,0.00022727242,0.00019371776,0.0000062406634,0.000050323477],"genre_scores_gemma":[0.999619,0.00012281755,0.000019149473,0.00003688266,0.00006454982,2.3933579e-8,0.00004301519,0.000006440777,0.00008808733],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998095,0.0004925116,0.00045778847,0.00020309172,0.00057984225,0.00017180636],"domain_scores_gemma":[0.99823684,0.0002287451,0.0010431564,0.0003701584,0.000040570605,0.0000805479],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007038408,0.00017496497,0.00041548253,0.00011227849,0.00029469433,0.00001529409,0.00063584145,0.000059930408,0.0011004944],"category_scores_gemma":[0.00006179442,0.0001130145,0.00022251162,0.0006091101,0.0005756774,0.00018533575,0.00012562485,0.00023016396,0.000043144224],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009083271,0.00066449423,0.78063303,0.0000028215811,0.0011725908,0.0000053848894,0.0020720195,0.03076595,0.18225893,0.0000036200267,0.0014337265,0.000079127974],"study_design_scores_gemma":[0.0010195642,0.00059222966,0.9920463,0.000013224206,0.0017723988,0.000005277874,0.0021148918,0.0017378527,0.00023116844,0.00003994689,0.00026648337,0.00016067388],"about_ca_topic_score_codex":0.0060390374,"about_ca_topic_score_gemma":0.007734232,"teacher_disagreement_score":0.21141328,"about_ca_system_score_codex":0.00023161041,"about_ca_system_score_gemma":0.000020418294,"threshold_uncertainty_score":0.99981266},"labels":[],"label_agreement":null},{"id":"W1610677667","doi":"10.1002/047147844x.aw2210","title":"Plant and Microorganism Selection for Phytoremediation of Hydrocarbons and Metals","year":2004,"lang":"en","type":"other","venue":"Water Encyclopedia","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Phytoremediation; Environmental science; Heavy metals; Contamination; Protocol (science); Metalloid; Waste management; Environmental protection; Environmental chemistry; Engineering; Chemistry; Biology; Ecology; Metal","score_opus":0.005280453812913966,"score_gpt":0.19114632417654437,"score_spread":0.1858658703636304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1610677667","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5100383,0.0013634402,0.0012597251,0.00079074525,0.0025230856,0.0055533256,0.0018469242,0.0004453907,0.47617906],"genre_scores_gemma":[0.6754768,0.0046336334,0.0077882125,0.0003617404,0.0008245519,0.00005658793,0.001011066,0.00049834343,0.30934906],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992645,0.000015370138,0.00017349911,0.0002691751,0.00011123763,0.0001662334],"domain_scores_gemma":[0.9997457,0.000009473968,0.00010872706,0.00007399363,0.0000027835342,0.00005931307],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000932725,0.00016455886,0.0001985785,0.00006034428,0.000027739941,0.000010865524,0.00005706244,0.00018515579,0.00079439726],"category_scores_gemma":[0.000009248013,0.00011893888,0.000026859117,0.000044041662,0.000091040725,0.000040162427,0.000050528903,0.00005296268,0.00004765688],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025418005,0.0000702371,0.010321291,0.00015586727,0.000063749656,9.316756e-7,0.0009048381,0.000001158059,0.8681533,0.000029956773,0.11849705,0.0017762006],"study_design_scores_gemma":[0.0010018992,0.00013060817,0.004590266,0.000060236427,0.00013060687,0.000011184612,0.00001590666,0.000026502126,0.2028149,0.00042780876,0.7903248,0.000465236],"about_ca_topic_score_codex":0.00031397326,"about_ca_topic_score_gemma":0.000799878,"teacher_disagreement_score":0.6718278,"about_ca_system_score_codex":0.000036705056,"about_ca_system_score_gemma":0.000008761691,"threshold_uncertainty_score":0.8698093},"labels":[],"label_agreement":null},{"id":"W1617586584","doi":"10.1016/s0065-2164(00)47007-3","title":"Microbial degradation of the pesticide lindane (γ-hexachlorocyclohexane)","year":2000,"lang":"en","type":"review","venue":"Advances in applied microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Biodegradation; Environmental chemistry; Hexachlorocyclohexane; Lindane; Pesticide; Microbial biodegradation; Chemistry; Microorganism; Hazardous waste; Degradation (telecommunications); Xenobiotic; Environmental pollution; Environmental science; Bacteria; Biology; Organic chemistry; Ecology; Environmental protection","score_opus":0.011364458241540384,"score_gpt":0.25825959299975304,"score_spread":0.24689513475821265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1617586584","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000883347,0.9884729,0.000019236006,0.000020267347,0.0005966554,0.0013408056,0.00023430168,0.000027227283,0.008405268],"genre_scores_gemma":[0.0005922316,0.9977681,0.00065091456,0.0001527425,0.000052107072,0.000016721018,0.00027940495,0.000030723328,0.0004570359],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978157,0.00016337332,0.0009260364,0.00060168776,0.0000825892,0.00041057417],"domain_scores_gemma":[0.9987191,0.00014218217,0.00063877215,0.00045217742,0.0000049433243,0.000042813066],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021323621,0.00042043932,0.0010582946,0.00008583641,0.00006391287,0.000008526456,0.00085628766,0.00047670107,0.0019989333],"category_scores_gemma":[0.000024516914,0.00027955527,0.00023040557,0.0005618867,0.00059247995,0.000059015518,0.00028417603,0.000447031,0.00060136925],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021538393,0.000081419304,0.000068934925,0.00059066626,0.000012679842,0.000001559067,0.000032436845,0.00004047646,0.02463032,0.000034663128,0.0005274343,0.9739579],"study_design_scores_gemma":[0.00023938497,0.000016621532,0.000014045017,0.0005300193,0.00007766983,0.000045041557,0.0000047865005,4.9612186e-7,0.0020433106,0.00003797456,0.9966935,0.00029715322],"about_ca_topic_score_codex":0.000025562744,"about_ca_topic_score_gemma":0.0004110141,"teacher_disagreement_score":0.99616605,"about_ca_system_score_codex":0.00024448652,"about_ca_system_score_gemma":0.00006436118,"threshold_uncertainty_score":0.99996567},"labels":[],"label_agreement":null},{"id":"W1627818346","doi":"10.1016/s0167-2991(04)80146-0","title":"Chapter 5 Whole-cell bio-processing of aromatic compounds in crude oil and fuels","year":2004,"lang":"en","type":"book-chapter","venue":"Studies in surface science and catalysis","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Heteroatom; Bioprocess; Refining (metallurgy); Aromaticity; Chemistry; Crude oil; Biochemical engineering; Organic chemistry; Ring (chemistry); Pulp and paper industry; Petroleum engineering; Chemical engineering; Engineering; Molecule","score_opus":0.023100339448645466,"score_gpt":0.2534904435139284,"score_spread":0.23039010406528293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1627818346","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9122153,0.0045328722,6.2596615e-7,0.0003514219,0.00009745525,0.00009972068,0.00003846895,0.000011590295,0.082652576],"genre_scores_gemma":[0.98342115,0.0055138594,0.00029161302,0.00011045831,0.000007120395,0.0000012367518,0.000005422587,0.000011680634,0.010637476],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979692,0.00001021371,0.00047635043,0.0006330793,0.0006073977,0.00030376966],"domain_scores_gemma":[0.99935246,0.000032573163,0.0002652986,0.00023120792,0.000035057816,0.00008340172],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.000822689,0.00028029308,0.000528239,0.00019401986,0.00016636754,0.000034716202,0.00029016274,0.00010829108,0.00009569073],"category_scores_gemma":[0.00004205316,0.00023413966,0.00004236081,0.00038102438,0.003788336,0.00028838424,0.00050732726,0.0001647225,0.00003933281],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005503919,0.00025292303,0.04670324,0.0010807057,0.00007263149,0.000068169684,0.026667818,0.00030625224,0.83856064,0.0003920791,0.00027886397,0.085561655],"study_design_scores_gemma":[0.02675418,0.0029018004,0.21002209,0.027329974,0.0028043187,0.0002428102,0.078842625,0.0022037649,0.45676854,0.067569144,0.09993915,0.024621584],"about_ca_topic_score_codex":0.00017685581,"about_ca_topic_score_gemma":0.0009320893,"teacher_disagreement_score":0.38179207,"about_ca_system_score_codex":0.00021934255,"about_ca_system_score_gemma":0.00005029903,"threshold_uncertainty_score":0.99892277},"labels":[],"label_agreement":null},{"id":"W1628915373","doi":"10.1016/s0166-2481(02)80015-0","title":"Phytoremediation of oil-contaminated soils","year":2002,"lang":"en","type":"book-chapter","venue":"Developments in psychiatry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":71,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Phytoremediation; Rhizosphere; Environmental remediation; Bioremediation; Environmental science; Soil contamination; Soil water; Contamination; Ecology; Biology; Soil science","score_opus":0.009615713710917453,"score_gpt":0.19960465628101065,"score_spread":0.1899889425700932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1628915373","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.026765479,0.00012823663,0.0000034449379,0.00013025948,0.0028091338,0.00019458824,0.000059484606,0.0000365322,0.96987283],"genre_scores_gemma":[0.16204792,0.0018934216,0.00933762,0.0011638325,0.00023570012,0.0000134590155,0.000442346,0.00013391103,0.82473177],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99817157,0.000016259686,0.0006881368,0.000416632,0.00045753925,0.00024987385],"domain_scores_gemma":[0.99922156,0.000014290376,0.00043699818,0.00023480973,0.000016030861,0.00007633682],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00018526055,0.00030294785,0.0003262277,0.0001550216,0.000034094217,0.000009584124,0.00028615576,0.0003966938,0.009148745],"category_scores_gemma":[0.0000140785305,0.00030282515,0.000073662275,0.00011225746,0.000107986816,0.000090333255,0.00011352674,0.00025048788,0.001794524],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018834925,0.00092448964,0.40490103,0.0005500095,0.00033234202,0.000041255782,0.0029799417,0.000037226404,0.009542443,0.007342966,0.23735142,0.33580852],"study_design_scores_gemma":[0.0038095945,0.00013577317,0.35587987,0.0012601205,0.000082222825,0.000012650941,0.00006294708,0.00005690336,0.0030830738,0.0040032337,0.629079,0.0025346226],"about_ca_topic_score_codex":0.000018491563,"about_ca_topic_score_gemma":0.0002671126,"teacher_disagreement_score":0.39172757,"about_ca_system_score_codex":0.00027302894,"about_ca_system_score_gemma":0.000058110545,"threshold_uncertainty_score":0.99994236},"labels":[],"label_agreement":null},{"id":"W1629379067","doi":"10.1007/978-1-60761-439-5_12","title":"Plasmid-Mediated Bioaugmentation of Wastewater Microbial Communities in a Laboratory-Scale Bioreactor","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"","keywords":"Bioaugmentation; Plasmid; Bioreactor; Xenobiotic; Biodegradation; Microbiology; Wastewater; Biology; Microbial population biology; Degradation (telecommunications); Bacteria; Microorganism; Catabolism; Biotechnology; Gene; Environmental engineering; Genetics; Environmental science; Ecology; Biochemistry; Engineering; Botany","score_opus":0.012634796554051891,"score_gpt":0.31586798888324813,"score_spread":0.3032331923291962,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1629379067","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99489707,0.000027419199,0.0041713417,0.0002846866,0.000106625645,0.00018522122,0.000046689198,0.000012745067,0.00026819058],"genre_scores_gemma":[0.8295289,0.00003185252,0.16950762,0.00076995813,0.000006215668,0.0000038435383,0.00013404123,0.0000073057067,0.000010214582],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99818027,0.00093929213,0.00037427392,0.00018282894,0.000063553925,0.00025978213],"domain_scores_gemma":[0.9996102,0.00007126999,0.00008325409,0.00018749684,0.000009728482,0.000038075694],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008469135,0.00012841403,0.00022414952,0.0001420244,0.000017679838,0.000006114702,0.00020450368,0.00017532939,0.0006087671],"category_scores_gemma":[0.00005498178,0.000102084814,0.000036289555,0.00033081448,0.00023585767,0.00004525318,0.00007847552,0.00014026905,0.000038932943],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003834364,0.00010522352,0.027601503,0.0000030214155,0.0000026812068,0.0000037905922,0.00072884304,0.000021120759,0.9699877,0.000013705692,0.000033546632,0.0014605253],"study_design_scores_gemma":[0.0006121482,0.00011589242,0.010759733,0.0000091291395,0.0000030284662,0.00000137086,0.00017335394,0.00007367058,0.98667663,0.00021286368,0.0012347176,0.0001274318],"about_ca_topic_score_codex":0.00032728727,"about_ca_topic_score_gemma":0.0005175078,"teacher_disagreement_score":0.16536812,"about_ca_system_score_codex":0.00008775202,"about_ca_system_score_gemma":0.000010315097,"threshold_uncertainty_score":0.66655725},"labels":[],"label_agreement":null},{"id":"W163857136","doi":"10.1007/978-3-662-05794-0_6","title":"Phytoremediation of Persistent Organic Contaminants in the Environment","year":2004,"lang":"en","type":"book-chapter","venue":"Soil biology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Phytoremediation; Environmental remediation; Environmental science; Pollutant; Contamination; Environmental chemistry; Environmentally friendly; Waste management; Environmental engineering; Soil contamination; Soil water; Chemistry; Biology; Ecology; Engineering; Soil science","score_opus":0.01205599513527704,"score_gpt":0.19535738123815943,"score_spread":0.18330138610288238,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W163857136","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.57200336,0.0008219335,0.00001686415,0.0014647022,0.00095812534,0.0014457225,0.00029243884,0.000031247764,0.42296562],"genre_scores_gemma":[0.9894542,0.0005860714,0.000020112435,0.00032677883,0.000044549848,0.0000031344878,0.000125074,0.000013006534,0.00942708],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989896,0.000043064265,0.000324614,0.00029027803,0.00016985112,0.00018263161],"domain_scores_gemma":[0.99943966,0.000035092595,0.00024721475,0.00024291554,0.000004143453,0.000030973155],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00025534705,0.00018548095,0.00024521927,0.000039820767,0.000029581168,0.0000034779198,0.000281834,0.00031011945,0.0076269903],"category_scores_gemma":[0.000014262671,0.00012658795,0.00014369936,0.000027577602,0.00032950044,0.000021406506,0.000097243705,0.00017963175,0.0010938629],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017478946,0.00071054115,0.0835023,0.00013164313,0.00031894664,0.000053545613,0.0072251274,0.00038028817,0.84389657,0.016418956,0.0047743903,0.042412877],"study_design_scores_gemma":[0.008724365,0.004184598,0.21875238,0.00045387977,0.00067657715,0.00006255556,0.0010186638,0.00010799315,0.053425465,0.0336582,0.67500496,0.0039303442],"about_ca_topic_score_codex":0.00008945631,"about_ca_topic_score_gemma":0.00038624357,"teacher_disagreement_score":0.79047114,"about_ca_system_score_codex":0.00028796506,"about_ca_system_score_gemma":0.00002415131,"threshold_uncertainty_score":0.9996839},"labels":[],"label_agreement":null},{"id":"W1653408305","doi":"10.3389/fmicb.2015.00827","title":"Metabolomics reveals differences of metal toxicity in cultures of Pseudomonas pseudoalcaligenes KF707 grown on different carbon sources","year":2015,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Innovates - Health Solutions","keywords":"Metal toxicity; Environmental chemistry; Pollutant; Fumarase; Biphenyl; Metabolomics; Bacteria; Metabolism; Toxicity; Chemistry; Carbon fibers; Catabolism; Microbial metabolism; Metal; Biochemistry; Biology; Enzyme; Organic chemistry; Heavy metals; Materials science; Chromatography","score_opus":0.015483468513464136,"score_gpt":0.2289507527861841,"score_spread":0.21346728427271996,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1653408305","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982364,0.00038320746,0.000025736086,0.00012407814,0.00056443666,0.00023412415,0.000082391416,0.0000085113,0.00034111843],"genre_scores_gemma":[0.9984619,0.00016750387,0.0010927408,0.0001170682,0.000018174298,0.000004220765,0.000025010768,0.000007891462,0.00010546482],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99833316,0.00030898504,0.00057979464,0.00035789417,0.000114376926,0.0003057759],"domain_scores_gemma":[0.999394,0.000042196174,0.00028337838,0.0001944957,0.0000150176365,0.0000709171],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038762743,0.00021901623,0.000657448,0.00014960741,0.000015330577,0.0000045009538,0.00036768249,0.00023183327,0.000075724034],"category_scores_gemma":[0.00009598392,0.0001572059,0.00008554738,0.00025246214,0.00047215397,0.000042347696,0.00014501829,0.00015113364,0.0000056710446],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009558702,0.00016684555,0.44142252,0.000006583346,0.0000142685685,0.0000011361973,0.00050630054,0.00004084195,0.556604,0.000012055373,0.00097438844,0.00015546201],"study_design_scores_gemma":[0.00094883854,0.00024504788,0.19592623,0.000026976993,0.00002016038,0.000004007929,0.0005922393,0.000055658358,0.80108386,0.00048777062,0.0003760734,0.00023312816],"about_ca_topic_score_codex":0.00045861024,"about_ca_topic_score_gemma":0.000658663,"teacher_disagreement_score":0.24549627,"about_ca_system_score_codex":0.00012444095,"about_ca_system_score_gemma":0.000015766547,"threshold_uncertainty_score":0.641067},"labels":[],"label_agreement":null},{"id":"W1711443380","doi":"10.1007/978-1-4614-6922-3_12","title":"IN SITU Bioremediation Of Chlorinated Ethene Source Zones","year":2014,"lang":"en","type":"book-chapter","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University; Golder Associates (Canada)","funders":"","keywords":"Bioremediation; Environmental science; Biochemical engineering; Waste management; Chlorinated solvents; Contamination; Environmental engineering; Groundwater; Petroleum engineering; Engineering; Ecology","score_opus":0.009940583371889156,"score_gpt":0.1999679434447656,"score_spread":0.19002736007287643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1711443380","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.050528526,0.000025228775,0.00027096918,0.0005794986,0.00038204028,0.00037907244,0.000019867726,0.000053128715,0.94776165],"genre_scores_gemma":[0.5018949,0.00012301072,0.00021724988,0.0003575389,0.00006948238,0.000001061511,0.000052463427,0.000024386272,0.49725994],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988822,0.000014392862,0.00038064807,0.0002801482,0.0002913807,0.00015125533],"domain_scores_gemma":[0.99944305,0.000028920875,0.00025195844,0.00020506272,0.0000122076735,0.000058790847],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00021781112,0.00019573464,0.00026025964,0.00009152493,0.000016021577,0.0000066174816,0.00017743895,0.00030578097,0.013241334],"category_scores_gemma":[0.000022050797,0.00016559026,0.00006653202,0.000054709624,0.00017404956,0.000053404034,0.00010759004,0.0001420758,0.0019480222],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010443167,0.000115652205,0.0035857477,0.00009430761,0.00004119241,0.000008564367,0.0006575705,0.00011227882,0.9138507,0.014269104,0.027416978,0.039743457],"study_design_scores_gemma":[0.001096388,0.00017922648,0.009011839,0.00011259752,0.000038684608,0.000003925401,0.000017842309,0.00021538504,0.17727438,0.002828826,0.8082787,0.0009422374],"about_ca_topic_score_codex":0.00016278296,"about_ca_topic_score_gemma":0.0008880145,"teacher_disagreement_score":0.7808617,"about_ca_system_score_codex":0.000100917496,"about_ca_system_score_gemma":0.000009208575,"threshold_uncertainty_score":0.99882907},"labels":[],"label_agreement":null},{"id":"W1717016355","doi":"10.1002/0470028637.met146","title":"2,3‐Dihydroxybiphenyl 1,2‐Dioxygenase","year":2004,"lang":"en","type":"other","venue":"Handbook of Metalloproteins","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Dioxygenase; Pseudomonas putida; Chemistry; Stereochemistry; Active site; Biphenyl; Enzyme; Pseudomonas; Burkholderia; Bacteria; Biochemistry; Biology; Organic chemistry","score_opus":0.005892672514594958,"score_gpt":0.19453769096459153,"score_spread":0.18864501844999657,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1717016355","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0009018493,0.0022121496,0.0007556688,0.000089005705,0.00036980925,0.0012797774,0.00020970205,0.00022142672,0.9939606],"genre_scores_gemma":[0.005890052,0.0010010916,0.015993556,0.0002585526,0.00019701984,0.000024078961,0.000082693565,0.0004222366,0.9761307],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984305,0.000040053852,0.00033083043,0.0004239058,0.0004858119,0.0002888859],"domain_scores_gemma":[0.9989963,0.0000065073204,0.00037121828,0.00047605482,0.000006178524,0.00014370943],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00014954661,0.00032605042,0.0004388407,0.00010322763,0.000030249275,0.000012705384,0.00038798756,0.00033315714,0.11918417],"category_scores_gemma":[0.000028702505,0.00027555425,0.00019003598,0.0001777913,0.00027642667,0.000042765663,0.00017550106,0.00015517278,0.005437029],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020672474,0.00023340779,0.00009971598,0.00011727863,0.00012392768,0.000026533899,0.00009636476,0.000016642023,0.58118,0.00007669863,0.4134844,0.004524415],"study_design_scores_gemma":[0.00059344515,0.00006556177,0.00006432184,0.00036080086,0.000040100043,0.000003918044,0.000004051662,0.0000022432573,0.21501376,0.00014640186,0.78334266,0.00036271036],"about_ca_topic_score_codex":0.0012084346,"about_ca_topic_score_gemma":0.0013465149,"teacher_disagreement_score":0.3698583,"about_ca_system_score_codex":0.0001052225,"about_ca_system_score_gemma":0.00006030364,"threshold_uncertainty_score":0.99996966},"labels":[],"label_agreement":null},{"id":"W1753595346","doi":"10.1007/s10973-007-8526-5","title":"A potential bacterial carrier for bioremediation","year":2007,"lang":"en","type":"article","venue":"Journal of Thermal Analysis and Calorimetry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of New Brunswick; University of Toronto; University of Waterloo; Laurentian University","funders":"","keywords":"Pseudomonas putida; Bacteria; Burkholderia; Ipomoea; Chemistry; Starch; Food science; Bioremediation; Pseudomonas; Potato starch; Inoculation; Microbacterium; Microorganism; Botany; Horticulture; Biology","score_opus":0.005028091659657881,"score_gpt":0.2211807682128162,"score_spread":0.21615267655315834,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1753595346","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912353,0.000034941626,0.008139124,0.00009586356,0.00031672904,0.00004567849,0.00001595928,0.0000026101159,0.00011380385],"genre_scores_gemma":[0.9981856,0.000017665092,0.0012017451,0.00010929736,0.0003941508,1.214844e-7,0.000007141676,0.0000039436763,0.00008034392],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999177,0.000021228692,0.00034557722,0.00009540875,0.00022099359,0.00013978673],"domain_scores_gemma":[0.9994698,0.000029187544,0.00028826017,0.000056754998,0.000034556528,0.00012144636],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00079674914,0.00007484986,0.00018728319,0.00012827151,0.00005823674,0.000028436463,0.000088673325,0.000065387074,0.0010372532],"category_scores_gemma":[0.000041608888,0.000052416297,0.0002193348,0.00035590527,0.000049368628,0.0001256917,0.000027153343,0.000062307976,0.0000062283993],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002372672,0.000041139636,0.08292889,0.0000021644512,0.0002200738,0.000004276143,0.00007701038,0.00006070264,0.9044355,0.000003187815,0.000417418,0.011572345],"study_design_scores_gemma":[0.0009909504,0.00019912286,0.8520088,0.0000029207683,0.0010209478,0.0000096201375,0.000104051825,0.00040149371,0.1387521,0.000033282544,0.0063089435,0.00016776101],"about_ca_topic_score_codex":0.000040555693,"about_ca_topic_score_gemma":0.000051281277,"teacher_disagreement_score":0.7690799,"about_ca_system_score_codex":0.0000440324,"about_ca_system_score_gemma":0.000007711037,"threshold_uncertainty_score":0.99987596},"labels":[],"label_agreement":null},{"id":"W1759034059","doi":"10.1111/j.1462-2920.2007.01282.x","title":"Isotope analysis as a natural reaction probe to determine mechanisms of biodegradation of 1,2‐dichloroethane","year":2007,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; U.S. Environmental Protection Agency","keywords":"Biodegradation; Isotope analysis; Fractionation; Environmental chemistry; Degradation (telecommunications); Isotope fractionation; Electron acceptor; Kinetic isotope effect; Isotopes of carbon; Isotope; Stable isotope ratio; Chemistry; Chromatography; Total organic carbon; Biology; Organic chemistry; Deuterium; Ecology","score_opus":0.0057104106065859386,"score_gpt":0.21122917075797187,"score_spread":0.20551876015138593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1759034059","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966203,0.00001824398,0.002449399,0.00007906353,0.00014920525,0.00032742182,0.00011107648,0.000012554788,0.00023272124],"genre_scores_gemma":[0.9952172,0.000013827323,0.0038425254,0.00026947891,0.000011544979,0.0000023490834,0.0002664645,0.000008977081,0.00036763452],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99876785,0.00005118175,0.00046604653,0.0003429948,0.00011487452,0.00025703904],"domain_scores_gemma":[0.999377,0.000034650657,0.0002793299,0.00022267309,0.0000035101664,0.000082836246],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00035388797,0.00016012903,0.00028040545,0.00016862722,0.00003543773,0.0000027170106,0.00018716563,0.00012909103,0.0017568722],"category_scores_gemma":[0.000020990887,0.00014224782,0.00012265565,0.00042127992,0.00019884834,0.00008020744,0.00015657167,0.00008695382,0.00028661857],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013323965,0.00013659682,0.012931619,0.000003257052,0.000057287216,0.0000019399774,0.00013501047,0.000014579215,0.98358655,0.000013046747,0.000056644327,0.0029302386],"study_design_scores_gemma":[0.00027703782,0.00023470812,0.08876522,0.0000035705466,0.00007851253,0.00001733544,0.000090678805,0.000012026384,0.9092968,0.00003612808,0.0010500492,0.00013792126],"about_ca_topic_score_codex":0.0002366375,"about_ca_topic_score_gemma":0.0003231555,"teacher_disagreement_score":0.0758336,"about_ca_system_score_codex":0.00016791331,"about_ca_system_score_gemma":0.000004305413,"threshold_uncertainty_score":0.99915564},"labels":[],"label_agreement":null},{"id":"W1767958103","doi":"10.1128/aem.00786-15","title":"Metabolism of Doubly <i>para</i> -Substituted Hydroxychlorobiphenyls by Bacterial Biphenyl Dioxygenases","year":2015,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Biphenyl; Hydroxylation; Dioxygenase; Chemistry; Metabolite; Stereochemistry; Metabolism; Ring (chemistry); Burkholderia; Bacteria; Biochemistry; Enzyme; Organic chemistry; Biology","score_opus":0.009151299514097625,"score_gpt":0.1819999500841767,"score_spread":0.17284865057007906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1767958103","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972122,0.00021604783,0.00004023662,0.00006491835,0.0002286946,0.00027307397,0.0005411231,0.000028747965,0.0013950057],"genre_scores_gemma":[0.9979403,0.0001690241,0.00051524985,0.0003757165,0.000050944916,0.00000888143,0.0007680221,0.000018133205,0.00015371056],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986843,0.000045742447,0.00036951387,0.0004564443,0.000096564734,0.0003474661],"domain_scores_gemma":[0.9993803,0.000022927818,0.00016906731,0.00021793004,0.0000018375935,0.00020792807],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016049779,0.00026318256,0.00034524343,0.000028588174,0.00006291345,0.000012941731,0.00021296856,0.0001864801,0.001495101],"category_scores_gemma":[0.0000054223374,0.0002252091,0.00005236089,0.00009191509,0.0007623709,0.00009563713,0.0002695884,0.00010059712,0.00044492813],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010701927,0.00014568407,0.0023389754,0.0000030834583,0.000022795735,0.0000010970278,0.00017030658,0.000011559133,0.9895019,0.000025319794,0.0068096416,0.0008625959],"study_design_scores_gemma":[0.0020436528,0.00007147885,0.004936981,0.0000029123712,0.000036874964,0.000032058764,0.00011387744,0.000005128755,0.83767426,0.00007518033,0.15463722,0.00037040707],"about_ca_topic_score_codex":0.00018970281,"about_ca_topic_score_gemma":0.000034422024,"teacher_disagreement_score":0.1518277,"about_ca_system_score_codex":0.00007138828,"about_ca_system_score_gemma":0.0000090755,"threshold_uncertainty_score":0.99941766},"labels":[],"label_agreement":null},{"id":"W1779622554","doi":"10.3934/bioeng.2015.4.387","title":"A novel approach for harnessing biofilm communities in moving bed biofilm reactors for industrial wastewater treatment","year":2015,"lang":"en","type":"article","venue":"AIMS bioengineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Biofilm; Wastewater; Moving bed biofilm reactor; Environmental science; Sewage treatment; Waste management; Environmental engineering; Biochemical engineering; Engineering; Geology; Bacteria","score_opus":0.07607487592794143,"score_gpt":0.24465078655423664,"score_spread":0.1685759106262952,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1779622554","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942287,0.00002460553,0.004175795,0.00011773261,0.0003219086,0.0007810189,0.000109675944,0.00007004329,0.00017052787],"genre_scores_gemma":[0.9767299,0.0000060106545,0.022701459,0.000038438662,0.00010319025,0.000076216515,0.00021118988,0.000027946155,0.00010564141],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99900126,0.00001566096,0.0002702357,0.00021108368,0.00011720955,0.00038452173],"domain_scores_gemma":[0.9995481,0.000056979676,0.00008372562,0.00018286498,0.000009401031,0.00011897629],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003139358,0.0002055423,0.0002097189,0.00009563228,0.00006781062,0.0000619624,0.00017041652,0.00014373726,0.000030219106],"category_scores_gemma":[0.000053959342,0.00017004315,0.00006880587,0.00018390885,0.000057839618,0.00019186117,0.000072538816,0.00008128454,0.0000074848303],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011957928,0.00022814375,0.0127342455,0.000025891439,0.000026857879,6.5523056e-7,0.0026852184,0.007374621,0.9707272,0.000019042905,0.00045883804,0.005599707],"study_design_scores_gemma":[0.01156443,0.000760665,0.0021973066,0.00011679975,0.000063778025,0.000014417231,0.0055327234,0.26204807,0.6857739,0.000019115809,0.03066511,0.001243704],"about_ca_topic_score_codex":0.0009988922,"about_ca_topic_score_gemma":0.00012918678,"teacher_disagreement_score":0.2849533,"about_ca_system_score_codex":0.00040660155,"about_ca_system_score_gemma":0.000022252481,"threshold_uncertainty_score":0.6934158},"labels":[],"label_agreement":null},{"id":"W1872419947","doi":"10.1002/0471263397.env255","title":"Explosives, Microbial Degradation of","year":2003,"lang":"en","type":"other","venue":"Encyclopedia of Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Explosive material; Biodegradation; Environmental remediation; Degradation (telecommunications); Environmental science; Environmental safety; Environmental chemistry; Waste management; Biochemical engineering; Contamination; Ecology; Computer science; Chemistry; Engineering; Biology; Environmental health; Human health; Medicine","score_opus":0.004893586989490286,"score_gpt":0.18547219092016076,"score_spread":0.1805786039306705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1872419947","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11313296,0.00094905845,0.000045835535,0.000042847136,0.0012491929,0.0009859243,0.0028154054,0.000056146957,0.88072264],"genre_scores_gemma":[0.022056827,0.0067502754,0.0049680783,0.00025376995,0.00012736625,0.000011930128,0.0014899933,0.00039857606,0.9639432],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983547,0.00014140333,0.0005744529,0.00050312123,0.00011320521,0.00031312302],"domain_scores_gemma":[0.998761,0.00002874895,0.0007527175,0.00037828766,0.0000018229498,0.00007745366],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00010703594,0.00037012072,0.00054085936,0.00012280673,0.000022692522,0.0000023153207,0.0003599726,0.00051794125,0.08535137],"category_scores_gemma":[0.000017683438,0.0003507133,0.00015778166,0.00011571656,0.00075810624,0.0000431159,0.00021006665,0.00016611222,0.0015399815],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012257777,0.00018370236,0.003465414,0.000020518568,0.00003151947,0.0000014540768,0.000036946778,9.060173e-7,0.6735388,0.0000049649957,0.32185936,0.00084415],"study_design_scores_gemma":[0.0005119267,0.00011841626,0.0009908745,0.00003917808,0.000050747072,0.0000140075745,0.000032734464,1.912841e-7,0.09228577,0.000006973033,0.90559137,0.0003578228],"about_ca_topic_score_codex":0.00011791898,"about_ca_topic_score_gemma":0.00010670893,"teacher_disagreement_score":0.583732,"about_ca_system_score_codex":0.000113589114,"about_ca_system_score_gemma":0.000017149934,"threshold_uncertainty_score":0.9998945},"labels":[],"label_agreement":null},{"id":"W1874571310","doi":"10.1139/l09-174","title":"Enrichment and characterization of MTBE-degrading cultures under iron and sulfate reducing conditions","year":2010,"lang":"en","type":"article","venue":"Canadian Journal of Civil Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Suncor Energy Incorporated","keywords":"Biodegradation; Electron acceptor; Chemistry; Environmental chemistry; Enrichment culture; 16S ribosomal RNA; Sulfate-reducing bacteria; Sulfate; Organic chemistry; Bacteria; Biology; Biochemistry; Gene","score_opus":0.004123385611251151,"score_gpt":0.18125852058758402,"score_spread":0.17713513497633288,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1874571310","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991793,0.000029935305,0.00019021568,0.00018651487,0.0002107962,0.000034827794,0.000013100022,0.000002555901,0.00015272826],"genre_scores_gemma":[0.9997137,0.00003214613,0.0001523122,0.000029364688,0.00003679228,1.8504741e-7,0.0000036312963,0.000004994157,0.000026845895],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99960446,0.000005409779,0.0001529824,0.00005887742,0.00006275542,0.000115494244],"domain_scores_gemma":[0.99963915,0.000009268356,0.000086085085,0.000037415582,0.000011232996,0.00021686606],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012080958,0.000058322996,0.00007921609,0.0000720307,0.000049505936,0.00002438544,0.00004444493,0.000038064296,0.0003746295],"category_scores_gemma":[0.000025728561,0.00005276248,0.000014531614,0.00007076946,0.000047974412,0.00014182444,0.00000859243,0.00010732427,0.0000011804236],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[7.17049e-7,0.0000020166428,0.007625156,0.000007091335,0.000004100217,0.0000024306164,0.0003336226,0.00048099822,0.9911733,0.00006356522,0.00008242852,0.00022452441],"study_design_scores_gemma":[0.0003633016,0.000046512836,0.9225811,0.00008673206,0.000026260872,0.0001447998,0.00008831597,0.0013191358,0.071120724,0.000039799237,0.0039892644,0.00019404765],"about_ca_topic_score_codex":0.00034925313,"about_ca_topic_score_gemma":0.013405149,"teacher_disagreement_score":0.92005265,"about_ca_system_score_codex":0.000038960046,"about_ca_system_score_gemma":0.000024266952,"threshold_uncertainty_score":0.74803877},"labels":[],"label_agreement":null},{"id":"W1880329623","doi":"10.1111/1462-2920.12007","title":"Prospects for using combined engineered bacterial enzymes and plant systems to rhizoremediate polychlorinated biphenyls","year":2012,"lang":"en","type":"review","venue":"Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Rhizosphere; Biology; Bioremediation; Rhizobacteria; Oxidative enzyme; Biochemical engineering; Enzyme; Environmental chemistry; Biotechnology; Contamination; Bacteria; Ecology; Biochemistry; Chemistry; Engineering","score_opus":0.030489153210540517,"score_gpt":0.24135907784352695,"score_spread":0.21086992463298643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1880329623","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.046700522,0.9337775,0.000057857487,0.000024464918,0.0041073556,0.006102685,0.009094483,0.00009789052,0.000037251873],"genre_scores_gemma":[0.026896501,0.9604255,0.0020607803,0.00016325826,0.00092545064,0.0003030027,0.008205548,0.00024905376,0.0007709167],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.997431,0.00015099903,0.00073625584,0.0007871058,0.00009206611,0.00080260873],"domain_scores_gemma":[0.998891,0.00010080529,0.0003725683,0.00031021071,0.0000020743407,0.0003233618],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002790457,0.0006797316,0.0012812563,0.00012104113,0.00014949865,0.000046491994,0.0003361403,0.0005704823,0.00090314],"category_scores_gemma":[0.000017537875,0.0005607076,0.00018656159,0.00013767445,0.00024524963,0.00009889196,0.00044577126,0.00020748217,0.0006704949],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032595935,0.00056533376,0.0006793166,0.0032970342,0.00046254223,0.000017743158,0.00036718725,0.000012329727,0.92845494,0.00011619362,0.0033082343,0.062393196],"study_design_scores_gemma":[0.0006836484,0.0002370126,0.00007196161,0.00035978315,0.00033051678,0.00016495043,0.000014578719,0.000011256858,0.0027520931,0.0000014221825,0.9946045,0.0007682347],"about_ca_topic_score_codex":0.000037848036,"about_ca_topic_score_gemma":0.000013299287,"teacher_disagreement_score":0.9912963,"about_ca_system_score_codex":0.0005885637,"about_ca_system_score_gemma":0.000021967722,"threshold_uncertainty_score":0.99968445},"labels":[],"label_agreement":null},{"id":"W188233893","doi":"10.1023/a:1025620710581","title":"Naphthalene and Anthracene Mineralization Linked to Oxygen, Nitrate, Fe(III) and Sulphate Reduction in a Mixed Microbial Population","year":2003,"lang":"en","type":"article","venue":"Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Anthracene; Naphthalene; Chemistry; Mineralization (soil science); Environmental chemistry; Hydrocarbon; Phenanthrene; Microcosm; Polycyclic aromatic hydrocarbon; Oxygen; Nitrate; Bioremediation; Aromatic hydrocarbon; Nitrogen; Organic chemistry; Contamination; Ecology","score_opus":0.011628732666952456,"score_gpt":0.22109555346893756,"score_spread":0.2094668208019851,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W188233893","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99864703,0.00005021233,0.00017674013,0.0003318349,0.00023824467,0.0003906807,0.000012645944,0.000026637932,0.0001259873],"genre_scores_gemma":[0.997315,0.000109559485,0.0019798246,0.000094968535,0.000024927424,0.000005802855,0.00018686219,0.000009525515,0.00027352845],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989792,0.00010249111,0.000272535,0.00034312913,0.00013078038,0.00017186673],"domain_scores_gemma":[0.9996992,0.000007983477,0.000094749965,0.00009665811,0.000015076043,0.00008634652],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002820231,0.00013533857,0.000119078184,0.000108954504,0.00009211497,0.00005698327,0.00003858597,0.00010609509,0.00012961068],"category_scores_gemma":[0.000051498624,0.00013327798,0.000014112353,0.0004189667,0.000044640554,0.00032639244,0.000024977846,0.000051181963,0.00003005832],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004159708,0.000044221542,0.0680096,0.0000064604146,0.000002159353,5.2362117e-7,0.00021146657,0.000034565626,0.9267549,0.000059819995,0.0004550381,0.0043796273],"study_design_scores_gemma":[0.0009770597,0.000062271516,0.91144675,0.000022695845,0.000009388915,0.000024188288,0.000102506965,0.00034747185,0.08523458,0.000086629196,0.0014317351,0.00025471853],"about_ca_topic_score_codex":0.0011230701,"about_ca_topic_score_gemma":0.0016354792,"teacher_disagreement_score":0.84343714,"about_ca_system_score_codex":0.00011121113,"about_ca_system_score_gemma":0.000007272939,"threshold_uncertainty_score":0.54349184},"labels":[],"label_agreement":null},{"id":"W1883822615","doi":"10.1002/0471263397.env090","title":"Bioremediation of Soils","year":2003,"lang":"en","type":"other","venue":"Encyclopedia of Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Bioremediation; Phytoremediation; Biodegradation; Environmental science; Environmental chemistry; Soil contamination; Soil water; Contamination; Chemistry; Soil science; Biology; Ecology","score_opus":0.003614648390764997,"score_gpt":0.18428731257287595,"score_spread":0.18067266418211095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1883822615","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06976056,0.00073446624,0.000022642158,0.00003321885,0.0010461756,0.0006616145,0.001980993,0.000044484415,0.92571586],"genre_scores_gemma":[0.12139908,0.012406289,0.004803985,0.00037775768,0.0002506686,0.000016905948,0.0015966394,0.00058632146,0.85856235],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984777,0.00011399171,0.0005429027,0.00044232784,0.00012898122,0.0002940884],"domain_scores_gemma":[0.99878097,0.000029906834,0.0007487769,0.00036154976,0.0000015573439,0.00007722044],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00013221973,0.00032581942,0.00050141744,0.00012196653,0.00001722606,0.0000016358938,0.00030609945,0.0005285866,0.0831539],"category_scores_gemma":[0.00002213142,0.00030019102,0.00014067703,0.00011974897,0.0007230644,0.00003156199,0.00016880507,0.00014587592,0.0016841142],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009742051,0.00018942989,0.008501399,0.000025334972,0.00003417461,0.0000014161551,0.000056182762,0.0000020910545,0.6459002,0.0000058938735,0.34392157,0.0013526144],"study_design_scores_gemma":[0.00046375123,0.0001210243,0.0031887388,0.000029632778,0.00004624302,0.000008494157,0.00002407485,5.584899e-7,0.04109261,0.0000141791625,0.9546673,0.00034336685],"about_ca_topic_score_codex":0.000099206176,"about_ca_topic_score_gemma":0.00009609309,"teacher_disagreement_score":0.6107458,"about_ca_system_score_codex":0.000097090866,"about_ca_system_score_gemma":0.000015022495,"threshold_uncertainty_score":0.99994504},"labels":[],"label_agreement":null},{"id":"W1916179868","doi":"10.1139/s04-073","title":"Screening of biosurfactants for crude oil contaminated soil washing","year":2005,"lang":"en","type":"article","venue":"Journal of Environmental Engineering and Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Rhamnolipid; Pulmonary surfactant; Chemistry; Contamination; Distilled water; Tannin; Soil contamination; Residual oil; Pulp and paper industry; Chromatography; Soil water; Environmental chemistry; Environmental science; Food science; Organic chemistry; Bacteria; Geology","score_opus":0.0059056484333285305,"score_gpt":0.19161204234447998,"score_spread":0.18570639391115146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1916179868","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985751,0.00010073572,0.00093525206,0.000082056846,0.00010604507,0.000035751997,0.000015589887,0.0000054669513,0.00014399843],"genre_scores_gemma":[0.9883605,0.00011875558,0.01135003,0.00004425835,0.000033739103,3.2612303e-7,5.288228e-7,0.000006888662,0.00008493237],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989407,0.000007080182,0.00034207208,0.00014381841,0.00034888304,0.00021745934],"domain_scores_gemma":[0.9995162,0.00004414086,0.00021391436,0.000075659285,0.0000061671863,0.00014394122],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006636008,0.0001042576,0.000159995,0.00007937535,0.00008369138,0.000025329868,0.00022058873,0.000038114747,0.00012063689],"category_scores_gemma":[0.00007290691,0.00008703407,0.000052148796,0.00014151976,0.00026704988,0.00044796665,0.00008195997,0.000092130096,0.000004323146],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015616042,0.000035553578,0.0037280861,0.0000061485066,0.0000049258224,8.4440774e-7,0.00020484385,0.007207842,0.9668091,0.0000027952144,0.00004016614,0.021944106],"study_design_scores_gemma":[0.0013024351,0.00028064643,0.11460788,0.00009650138,0.000027105612,0.000093516166,0.0002498991,0.038360458,0.8385915,0.0000037500997,0.0060946583,0.0002916603],"about_ca_topic_score_codex":0.0000047145054,"about_ca_topic_score_gemma":0.0000021789135,"teacher_disagreement_score":0.12821758,"about_ca_system_score_codex":0.000106649575,"about_ca_system_score_gemma":0.000010298276,"threshold_uncertainty_score":0.3549146},"labels":[],"label_agreement":null},{"id":"W1939231954","doi":"10.21083/surg.v5i1.1257","title":"Determining a Bioventing Scale-Up Factor","year":2011,"lang":"en","type":"article","venue":"SURG Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Gasoline; Environmental science; Soil water; Groundwater remediation; Bioremediation; Environmental remediation; Environmental engineering; Contamination; Soil science; Environmental chemistry; Waste management; Chemistry; Engineering; Ecology","score_opus":0.03828483120229896,"score_gpt":0.22086732278024027,"score_spread":0.18258249157794132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1939231954","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9896283,0.000009290942,0.00011346979,0.000023476592,0.0006012724,0.000030446014,0.000003330299,0.00001655134,0.009573842],"genre_scores_gemma":[0.99810475,0.000019541072,0.0011910433,0.00013903066,0.00008804427,1.8456095e-7,4.550211e-7,0.0000067178494,0.0004502115],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99925524,0.000035297413,0.0001975309,0.00010904216,0.00017606122,0.00022684612],"domain_scores_gemma":[0.9996468,0.000010793668,0.00012707195,0.00007116431,0.000006652199,0.00013753709],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002407611,0.00007686935,0.00007802009,0.000027451097,0.00013577002,0.000040324725,0.00014585012,0.000040160478,0.019664368],"category_scores_gemma":[0.000022344513,0.000060228384,0.000066560206,0.00009080456,0.000053565152,0.00019021632,0.00006621044,0.00013614612,0.00097047386],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011109672,0.000026907546,0.75464505,0.0000012383034,0.0000057842003,0.000024318819,0.0012879118,3.4594984e-7,0.17955656,7.164607e-7,0.0014994656,0.0629406],"study_design_scores_gemma":[0.0006581301,0.00007809282,0.82658195,0.000034364777,0.000012438413,0.00031215366,0.00034575595,0.000077467834,0.15195309,0.00009175886,0.019519106,0.0003356999],"about_ca_topic_score_codex":0.000019466845,"about_ca_topic_score_gemma":0.000039755963,"teacher_disagreement_score":0.071936905,"about_ca_system_score_codex":0.00005272349,"about_ca_system_score_gemma":0.000011423513,"threshold_uncertainty_score":0.99980736},"labels":[],"label_agreement":null},{"id":"W1944473324","doi":"10.1111/j.1574-6941.2006.00191.x","title":"Microbial composition of chlorinated ethene-degrading cultures dominated by Dehalococcoides","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":217,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; University of Toronto","keywords":"Phylotype; Biology; Methanosaeta; Microbiology; Euryarchaeota; Temperature gradient gel electrophoresis; Dehalococcoides; 16S ribosomal RNA; Enrichment culture; Methanomicrobiales; Vinyl chloride; Gene; Bacteria; Genetics; Archaea; Methanosarcina; Chemistry","score_opus":0.0039033167579865967,"score_gpt":0.20318169217132032,"score_spread":0.1992783754133337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1944473324","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99712676,0.00006376073,0.000033272314,0.0005310069,0.00043983813,0.00030358278,0.0002229759,0.000065905944,0.0012128884],"genre_scores_gemma":[0.9975238,0.000017695316,0.0004818229,0.0004221153,0.000038402315,0.000006632265,0.0008396694,0.000015620877,0.0006542359],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984256,0.0001796091,0.00048276686,0.00042006723,0.000043535118,0.0004484044],"domain_scores_gemma":[0.9993847,0.000069745256,0.0003002386,0.000164353,0.000030045974,0.000050930572],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021698009,0.0002319098,0.00035656776,0.000070060436,0.00013798842,0.000011026374,0.00028565162,0.00042068865,0.0022311343],"category_scores_gemma":[0.00001796803,0.00020401752,0.00009211647,0.00024044482,0.00083422614,0.00007601126,0.0001359981,0.0001783307,0.00047590857],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000068517016,0.00018028474,0.030786777,0.0000041570456,0.000018276802,0.0000041869257,0.000059896942,0.000032180822,0.89809054,0.00004184946,0.0705655,0.000147847],"study_design_scores_gemma":[0.0009955988,0.00013854014,0.03339041,0.000006588276,0.000020687768,0.00007227398,0.000020895997,0.000014821185,0.9436068,0.00008913075,0.021397244,0.0002470225],"about_ca_topic_score_codex":0.0006923876,"about_ca_topic_score_gemma":0.00096216495,"teacher_disagreement_score":0.04916826,"about_ca_system_score_codex":0.00017263569,"about_ca_system_score_gemma":0.000014005115,"threshold_uncertainty_score":0.99868095},"labels":[],"label_agreement":null},{"id":"W195452540","doi":"","title":"Screening and characterization of biosurfactant producers from petroleum hydrocarbon contaminated marine sources in North Atlantic Canada for oil spill responses","year":2014,"lang":"en","type":"dissertation","venue":"Memorial University Research Repository (Memorial University)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Dispersant; Petroleum; Oil spill; Environmentally friendly; Environmental science; Waste management; Biology; Environmental engineering; Engineering; Dispersion (optics); Ecology","score_opus":0.010980269952636207,"score_gpt":0.20310855650228868,"score_spread":0.19212828654965247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W195452540","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99470484,0.0000048130214,0.0000042936977,0.000051534967,0.0019369203,0.0004999677,0.00026934312,0.000027359476,0.0025009443],"genre_scores_gemma":[0.9843413,0.00011768703,0.000058523223,0.000004743815,0.00046375347,2.1790258e-7,0.0017088688,0.000026183578,0.013278712],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99676394,0.0006872755,0.00036565034,0.00084987236,0.0008289928,0.0005042606],"domain_scores_gemma":[0.99846995,0.000340346,0.00045769586,0.00032639867,0.00016972922,0.00023588323],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005310068,0.00032831755,0.00056620094,0.0005602784,0.00045491735,0.000055907745,0.000627527,0.00034800117,0.000084811516],"category_scores_gemma":[0.00019618923,0.00038302483,0.00010075288,0.00089221355,0.0002705334,0.00024967286,0.00031178026,0.00045953618,0.000002883613],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.020361839,0.00014025367,0.1659921,0.00025002242,0.00016104146,0.00040677728,0.0011253539,0.00004936773,0.8094433,0.000026746558,0.00037559355,0.001667603],"study_design_scores_gemma":[0.011543142,0.0010546442,0.7091689,0.00047599906,0.00042414645,0.0000062335434,0.006630298,0.0011669919,0.19328572,0.00000945141,0.07454468,0.0016897902],"about_ca_topic_score_codex":0.5360323,"about_ca_topic_score_gemma":0.77220064,"teacher_disagreement_score":0.6161576,"about_ca_system_score_codex":0.0011317771,"about_ca_system_score_gemma":0.00065294426,"threshold_uncertainty_score":0.9998622},"labels":[],"label_agreement":null},{"id":"W1956417297","doi":"10.1111/j.1472-765x.2011.03154.x","title":"Characterization of rhamnolipid production by Burkholderia glumae","year":2011,"lang":"en","type":"article","venue":"Letters in Applied Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada; University of Michigan","keywords":"Rhamnolipid; Burkholderia; Pseudomonas aeruginosa; Critical micelle concentration; Carbon fibers; Nitrogen; Food science; Chemistry; Microbiology; Micelle; Bacteria; Biology; Materials science; Organic chemistry","score_opus":0.008056061923973304,"score_gpt":0.16587474722568976,"score_spread":0.15781868530171644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1956417297","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976219,0.0000020467276,0.00015597817,0.0003123962,0.00028857728,0.0002586696,0.00002626115,0.000020565494,0.0013136002],"genre_scores_gemma":[0.99764836,0.0000136125645,0.00065377855,0.0014124428,0.000025865105,0.0000078637295,0.0001632369,0.000008655508,0.00006619454],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991884,0.00003373345,0.00026063938,0.0002861941,0.00003280536,0.00019818645],"domain_scores_gemma":[0.9996753,0.0000043104965,0.0001428102,0.00015237319,0.0000027560754,0.000022484262],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013001355,0.00010814354,0.00014430881,0.000041960764,0.000021050144,0.0000025883085,0.00014855729,0.00010274802,0.0015275365],"category_scores_gemma":[0.000005220253,0.00010216425,0.000020473153,0.00016896952,0.00020584019,0.00004113274,0.00006344547,0.00008320766,0.00023603346],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038360296,0.00007049443,0.006285337,0.000004826696,0.0000034280513,3.7070313e-7,0.0004090874,8.2988777e-7,0.9892083,0.000012521334,0.003102016,0.0008644481],"study_design_scores_gemma":[0.00022524389,0.000015221982,0.013062978,0.0000033781005,0.000002871526,0.000004220042,0.0000119084525,8.5092836e-7,0.9797363,0.000009511349,0.006814974,0.00011250994],"about_ca_topic_score_codex":0.000053026215,"about_ca_topic_score_gemma":0.000031074553,"teacher_disagreement_score":0.009471949,"about_ca_system_score_codex":0.000056848567,"about_ca_system_score_gemma":0.0000028198917,"threshold_uncertainty_score":0.9993852},"labels":[],"label_agreement":null},{"id":"W1964267459","doi":"10.1016/s0167-7012(01)00299-8","title":"Colorimetric assay for Lindane dechlorination by bacteria","year":2001,"lang":"en","type":"article","venue":"Journal of Microbiological Methods","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":58,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biorem Technologies (Canada); University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Lindane; Bacteria; Chemistry; Microbiology; Environmental chemistry; Colorimetry; Biology; Chromatography; Ecology; Pesticide","score_opus":0.034572873343297075,"score_gpt":0.3407463509440156,"score_spread":0.30617347760071856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964267459","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8925231,0.00015103129,0.1050365,0.0006517357,0.0008013688,0.00022784581,0.000029468607,0.000014388583,0.00056452595],"genre_scores_gemma":[0.41085696,0.00045163743,0.5866679,0.00082634605,0.00021030717,0.0000027059205,0.000020699965,0.000011894087,0.0009515273],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986393,0.00039098746,0.0004894507,0.00016499264,0.00009285457,0.0002224355],"domain_scores_gemma":[0.99878854,0.00052796013,0.00043610172,0.0000787006,0.000055497723,0.000113222886],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0030990236,0.00012347777,0.00026272153,0.00006074635,0.00006515232,0.000027177184,0.00026215642,0.00018475438,0.0021586188],"category_scores_gemma":[0.0010879086,0.00008066045,0.00014498379,0.00035032607,0.000086771586,0.00011463898,0.00006117277,0.00016068252,0.000057416473],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013666516,0.00010836365,0.0034573446,0.0000014481133,0.000011147908,0.0000020553869,0.000012086075,0.000003346787,0.91998756,0.0000050383196,0.015782218,0.06049275],"study_design_scores_gemma":[0.00067053497,0.00056950416,0.012608162,0.000005232581,0.000020662317,0.00010316175,0.000012436733,0.000021413623,0.4186693,0.00017578865,0.5670092,0.00013457067],"about_ca_topic_score_codex":0.0000035293306,"about_ca_topic_score_gemma":0.0000013421018,"teacher_disagreement_score":0.551227,"about_ca_system_score_codex":0.00015409997,"about_ca_system_score_gemma":0.0000112444795,"threshold_uncertainty_score":0.99875355},"labels":[],"label_agreement":null},{"id":"W1964622919","doi":"10.1016/j.bej.2005.06.007","title":"Degradation of trichloroethylene in a coupled anaerobic–aerobic bioreactor: Modeling and experiment","year":2005,"lang":"en","type":"article","venue":"Biochemical Engineering Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Anaerobic exercise; Trichloroethylene; Degradation (telecommunications); Bioreactor; Chemistry; Cometabolism; Biodegradation; Biofilm; Mineralization (soil science); Environmental chemistry; Environmental science; Bacteria; Bioremediation; Biology; Organic chemistry; Nitrogen; Computer science","score_opus":0.008769207696152283,"score_gpt":0.20617045087806138,"score_spread":0.1974012431819091,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964622919","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967277,0.00025515878,0.0027891702,0.00009816199,0.00004688926,0.000055217835,0.0000012047769,0.0000110532765,0.000015468047],"genre_scores_gemma":[0.9908948,0.0001382506,0.008887663,0.000021091542,0.000037422924,9.4695463e-7,0.0000033457097,0.000007310143,0.000009193583],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99927455,0.0000079548145,0.00028617188,0.0001214223,0.0001513411,0.0001585364],"domain_scores_gemma":[0.9997556,0.000013525953,0.000060241146,0.000060605573,0.000007407161,0.000102591985],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018375868,0.00009667592,0.00011983809,0.000062574465,0.00001616464,0.00001415208,0.00008168722,0.00006777741,0.00016488782],"category_scores_gemma":[0.00005857233,0.00008563381,0.000030049545,0.0001442335,0.000025913694,0.000104703686,0.00003981688,0.00013084976,0.0000056916497],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000123022055,0.00005256063,0.00051061244,0.0000027711226,0.0000033886954,8.7099664e-7,0.00007932033,0.0103558935,0.98816615,0.0000039473985,0.000056449127,0.00075571344],"study_design_scores_gemma":[0.00072585966,0.000035564834,0.0018946244,0.000041495277,0.0000054213115,0.000020912408,0.000020847678,0.35217592,0.6447721,0.0000027961771,0.00015624602,0.00014821696],"about_ca_topic_score_codex":0.00002211667,"about_ca_topic_score_gemma":0.000004975784,"teacher_disagreement_score":0.34339407,"about_ca_system_score_codex":0.00015165383,"about_ca_system_score_gemma":0.0000075722915,"threshold_uncertainty_score":0.34920454},"labels":[],"label_agreement":null},{"id":"W1965644452","doi":"10.1007/s11270-008-9819-4","title":"Amphoteric Surfactants for PAH and Lead Polluted-Soil Treatment Using Flotation","year":2008,"lang":"en","type":"article","venue":"Water Air & Soil Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec; Institut National de la Recherche Scientifique","funders":"Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Environmental chemistry; Pollutant; Chemistry; Contamination; Soil water; Soil contamination; Pulmonary surfactant; Human decontamination; Pollution; Aqueous solution; Solubilization; Froth flotation; Soil Pollutants; Environmental science; Waste management; Organic chemistry","score_opus":0.026729106628812633,"score_gpt":0.22746564810941947,"score_spread":0.20073654148060682,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1965644452","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99819577,0.00002265171,0.00049775204,0.000416849,0.00022983461,0.00032947544,0.000092759816,0.00005244948,0.00016245921],"genre_scores_gemma":[0.9978991,0.00007990198,0.00067519624,0.00031694,0.00006550779,0.0000069507255,0.000068319496,0.000017400102,0.0008706967],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988689,0.00004573584,0.00023317973,0.00032867826,0.00016740264,0.0003561084],"domain_scores_gemma":[0.9996912,0.000008188552,0.00006790896,0.0001260699,0.000011689823,0.00009495592],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010939215,0.0001911788,0.00016019435,0.00004502193,0.00032354088,0.00002019077,0.00006290315,0.00009685458,0.00017205198],"category_scores_gemma":[0.0000069611365,0.00013702166,0.00006271517,0.00010760662,0.00014244879,0.00026198986,0.00004114979,0.000036209756,0.00022280724],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000068964575,0.00007831367,0.0071690953,0.0000051711477,0.000012051962,0.0000031281877,0.0011481132,0.00084901706,0.9844725,9.2441957e-7,0.00038974383,0.0058029843],"study_design_scores_gemma":[0.0017409656,0.00026485833,0.13203034,0.000012622093,0.000039147886,0.00005923664,0.0000665766,0.01062992,0.8508487,0.000047158213,0.0038935093,0.00036701153],"about_ca_topic_score_codex":0.0011071723,"about_ca_topic_score_gemma":0.0006255772,"teacher_disagreement_score":0.13362384,"about_ca_system_score_codex":0.0004551833,"about_ca_system_score_gemma":0.000016672102,"threshold_uncertainty_score":0.55875814},"labels":[],"label_agreement":null},{"id":"W1966064585","doi":"10.1002/bit.1082","title":"Enhanced selection of an anaerobic pentachlorophenol‐degrading consortium","year":2001,"lang":"en","type":"article","venue":"Biotechnology and Bioengineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BioPhage Pharma (Canada); Biotechnology Research Institute","funders":"","keywords":"Pentachlorophenol; Temperature gradient gel electrophoresis; Effluent; Chemistry; Anaerobic exercise; Population; Microbial consortium; Chlorophenol; Biodegradation; Phenol; 16S ribosomal RNA; Microbiology; Chromatography; Environmental chemistry; Food science; Bacteria; Biology; Microorganism; Environmental science; Biochemistry; Environmental engineering; Organic chemistry","score_opus":0.006720720720119882,"score_gpt":0.20201988180977384,"score_spread":0.19529916108965395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1966064585","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99744976,0.000033182638,0.00194759,0.0001328272,0.0000804791,0.000076317374,0.0000021152723,0.00011496262,0.000162741],"genre_scores_gemma":[0.9974657,0.00015671302,0.0022885206,0.00002805121,0.00001269678,0.0000012424396,0.0000034747945,0.0000057899074,0.00003777848],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999451,0.000007929315,0.00013664966,0.00018676228,0.00005522923,0.00016242664],"domain_scores_gemma":[0.99979657,0.000005636463,0.00006288135,0.0000889246,0.0000038747703,0.000042084914],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000072171635,0.000090235815,0.000101845595,0.000066586304,0.000048875765,0.0000061221426,0.000086843655,0.00016794477,0.00042365352],"category_scores_gemma":[0.000013185449,0.00008272049,0.000016026412,0.00027495183,0.00012829607,0.00009533504,0.00004728215,0.000092448856,0.000020067959],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010438078,0.000021196116,0.004995794,0.0000035543433,0.000005730199,0.0000014393453,0.000023591678,0.00005723791,0.9855926,0.00009870109,0.000008530205,0.009181172],"study_design_scores_gemma":[0.00017468851,0.00011231512,0.02470628,0.000005986812,0.0000072412813,0.000029235374,0.00004162227,0.0018877289,0.9722499,0.000011993853,0.0006615065,0.000111494875],"about_ca_topic_score_codex":0.000043345724,"about_ca_topic_score_gemma":0.000066523804,"teacher_disagreement_score":0.019710487,"about_ca_system_score_codex":0.000030252166,"about_ca_system_score_gemma":0.0000025302274,"threshold_uncertainty_score":0.4638709},"labels":[],"label_agreement":null},{"id":"W1966351373","doi":"10.2118/134961-ms","title":"Estimation of the Potential of an Oil-Viscosity-Reducing Bacterium <i>Petrotoga</i> sp. Isolated from an Oil Field for MEOR","year":2010,"lang":"en","type":"article","venue":"SPE Annual Technical Conference and Exhibition","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Brine; Bacteria; Enhanced oil recovery; Microbial enhanced oil recovery; Chemistry; Oil field; Viscosity; Salinity; Light crude oil; Nitrogen; Food science; Yeast extract; Biology; Microorganism; Fermentation; Petroleum engineering; Materials science; Ecology; Geology; Organic chemistry","score_opus":0.007777034963703311,"score_gpt":0.23952502377971466,"score_spread":0.23174798881601136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1966351373","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99680734,0.0000013335844,0.0018063182,0.00054061867,0.00012495021,0.00010512785,0.00024472945,0.000024190838,0.0003453655],"genre_scores_gemma":[0.9969569,0.00001250492,0.0026713393,0.00016074718,0.000042782794,0.000004453283,0.00011152621,0.0000052673004,0.000034493256],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99920213,0.000036127763,0.00025290952,0.00023097733,0.00015135013,0.00012652406],"domain_scores_gemma":[0.99950963,0.00002758771,0.0001478168,0.00020715986,0.000039591363,0.000068224785],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017254322,0.00009756806,0.0001364034,0.000018888799,0.00007989108,0.000026022477,0.00016661988,0.00016362798,0.00053790363],"category_scores_gemma":[0.000064206964,0.000073290605,0.000047614594,0.000089179885,0.00016690552,0.00037562157,0.00008085404,0.000148377,0.000005279808],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000092625225,0.00008831683,0.00027128754,0.00001015532,0.0000021161318,1.9048464e-7,0.00009285088,0.000017368697,0.96231306,0.00006645487,0.00014444112,0.036901165],"study_design_scores_gemma":[0.00052281644,0.00051700143,0.02553071,0.000057457062,0.000035139095,0.0000046054993,0.00012924355,0.00916049,0.9625736,0.0010688426,0.00021999728,0.0001800848],"about_ca_topic_score_codex":0.00059193576,"about_ca_topic_score_gemma":0.0006531092,"teacher_disagreement_score":0.036721077,"about_ca_system_score_codex":0.000010266069,"about_ca_system_score_gemma":0.000017034508,"threshold_uncertainty_score":0.5889668},"labels":[],"label_agreement":null},{"id":"W1967123560","doi":"10.1021/bi200960j","title":"Investigating the Molecular Determinants for Substrate Channeling in BphI–BphJ, an Aldolase–Dehydrogenase Complex from the Polychlorinated Biphenyls Degradation Pathway","year":2011,"lang":"en","type":"article","venue":"Biochemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Isobutyraldehyde; Propionaldehyde; Acetaldehyde; Chemistry; Aldolase A; Aldehyde; Aldehyde dehydrogenase; Cofactor; Stereochemistry; Glyceraldehyde; Aldehyde Reductase; Alcohol dehydrogenase; Dehydrogenase; Substrate (aquarium); Butyraldehyde; Enzyme; Biochemistry; Reductase; Catalysis; Ethanol; Biology","score_opus":0.05278180212795593,"score_gpt":0.2414509318874074,"score_spread":0.18866912975945146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967123560","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99914515,0.000037638478,0.000052091655,0.00013717114,0.000068292014,0.00028540168,0.00012438503,0.000026681173,0.00012317434],"genre_scores_gemma":[0.9983909,0.0000052587898,0.0008461931,0.00049310667,0.000050008195,0.000019474626,0.00015654168,0.000014061515,0.000024440908],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989256,0.000054507174,0.0002694204,0.00032745788,0.00015846452,0.00026454584],"domain_scores_gemma":[0.9993815,0.000048654652,0.00015256391,0.00031034078,0.000012455157,0.00009452136],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031779095,0.00016095376,0.000102269805,0.000009104203,0.00017307236,0.00003932579,0.0003975537,0.00009914351,0.0002668436],"category_scores_gemma":[0.00009113621,0.00010606083,0.00004712666,0.0001600904,0.0001853868,0.00009324911,0.00007732237,0.000104776096,0.000032836313],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014503293,0.00004055742,0.019687189,0.000004336192,0.000004076419,0.000003104194,0.0004529165,0.0000073378424,0.9786937,0.000004106016,0.000059391296,0.0010287409],"study_design_scores_gemma":[0.0002973527,0.000019087538,0.024545198,0.000017854949,0.000007535428,0.0000022320678,0.00032492823,0.0033050193,0.97106165,0.00016539077,0.000095253214,0.00015849105],"about_ca_topic_score_codex":0.0008729984,"about_ca_topic_score_gemma":0.00038893597,"teacher_disagreement_score":0.0076320837,"about_ca_system_score_codex":0.00005816497,"about_ca_system_score_gemma":0.00002459749,"threshold_uncertainty_score":0.4325035},"labels":[],"label_agreement":null},{"id":"W1967515710","doi":"10.1016/j.chembiol.2005.08.010","title":"Generation of D Amino Acid Residues in Assembly of Arthrofactin by Dual Condensation/Epimerization Domains","year":2005,"lang":"en","type":"article","venue":"Chemistry & Biology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":161,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"Epimer; Condensation; Dual (grammatical number); Dual purpose; Stereochemistry; Biology; Amino acid; Chemistry; Biochemistry; Physics; Thermodynamics","score_opus":0.01704299700025207,"score_gpt":0.24588640126561906,"score_spread":0.22884340426536698,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967515710","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984495,0.00004184662,0.00009003248,0.00021604844,0.00002619868,0.00006308953,0.000052182007,0.0000073839105,0.0010537291],"genre_scores_gemma":[0.9989164,0.00004828967,0.0004018879,0.00007399642,0.000038732604,0.0000016391168,0.0003461817,0.0000035065962,0.0001693587],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99933517,0.000032352767,0.0002859109,0.00016918518,0.00006945683,0.000107937376],"domain_scores_gemma":[0.99966455,0.0000148143135,0.00017993232,0.00010212522,0.000012211136,0.000026398144],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00011453409,0.00007441063,0.00012066973,0.000011553844,0.000017871313,0.000002529822,0.00006732148,0.00013236405,0.0014959513],"category_scores_gemma":[0.00005561872,0.00007080443,0.000020969155,0.00010354531,0.00015660003,0.00005714121,0.000030875333,0.00004660081,0.000027001186],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009422436,0.000048328326,0.039671343,0.0000049454547,0.000002978489,1.2809494e-7,0.000076407756,0.000024286337,0.9579504,0.000005407326,0.0010296159,0.0011767325],"study_design_scores_gemma":[0.00026753065,0.00001952386,0.014415664,0.0000019816769,0.0000029534333,0.0000013069517,0.000024198187,0.00012824227,0.98360306,0.000008194985,0.0014602587,0.00006707136],"about_ca_topic_score_codex":0.0000464782,"about_ca_topic_score_gemma":0.00010275495,"teacher_disagreement_score":0.02565267,"about_ca_system_score_codex":0.000054721728,"about_ca_system_score_gemma":0.0000120863215,"threshold_uncertainty_score":0.9994168},"labels":[],"label_agreement":null},{"id":"W1967607672","doi":"10.1016/j.ibiod.2014.01.010","title":"Optimization of field scale biopiles for bioremediation of petroleum hydrocarbon contaminated soil at low temperature conditions by response surface methodology (RSM)","year":2014,"lang":"en","type":"article","venue":"International Biodeterioration & Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":145,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Mitacs","keywords":"Bioremediation; Compost; Environmental remediation; Response surface methodology; Factorial experiment; Amendment; Environmental science; Microbial consortium; Total petroleum hydrocarbon; Coefficient of determination; Polycyclic aromatic hydrocarbon; Contamination; Microcosm; Soil water; Environmental chemistry; Soil contamination; Environmental engineering; Chemistry; Soil science; Microorganism; Waste management; Mathematics; Ecology; Biology; Chromatography; Statistics; Engineering","score_opus":0.010751741586760536,"score_gpt":0.2472882430032599,"score_spread":0.23653650141649937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967607672","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9716242,0.000013771364,0.024563637,0.0017879625,0.00054932054,0.00042554058,0.00089568656,0.000043402102,0.000096479875],"genre_scores_gemma":[0.98682696,0.00004671943,0.008781794,0.00030469932,0.000040298328,0.00001991781,0.0036313846,0.00001697824,0.00033125334],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99789435,0.00036001226,0.0007479579,0.00040440873,0.00040879953,0.00018447102],"domain_scores_gemma":[0.9982865,0.00044195505,0.00076862576,0.00022115208,0.00021160497,0.00007018912],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009005986,0.00021278183,0.0002811068,0.00014740917,0.00011694,0.0000347921,0.00025159956,0.0002748363,0.00061812386],"category_scores_gemma":[0.00055185764,0.00020571324,0.000112741676,0.00026815178,0.00018596345,0.00036061523,0.000071060145,0.00007944476,0.000026064841],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008442498,0.000108784654,0.005071109,0.000015915968,0.000021907714,6.873744e-8,0.00017026217,0.0056837834,0.98457444,0.00002706837,0.002997983,0.0004844339],"study_design_scores_gemma":[0.0010886505,0.0003808779,0.004357244,0.000030170342,0.00002684385,0.000002103588,0.00006277944,0.043144714,0.9491495,0.00004240763,0.0015115705,0.00020314055],"about_ca_topic_score_codex":0.00013918299,"about_ca_topic_score_gemma":0.0001843691,"teacher_disagreement_score":0.03746093,"about_ca_system_score_codex":0.0002198618,"about_ca_system_score_gemma":0.000029587036,"threshold_uncertainty_score":0.8388742},"labels":[],"label_agreement":null},{"id":"W1968839547","doi":"10.1007/s00284-009-9377-z","title":"Cloning, Overexpression, Purification, and Characterization of the Maleylacetate Reductase from Sphingobium chlorophenolicum Strain ATCC 53874","year":2009,"lang":"en","type":"article","venue":"Current Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Environment and Climate Change Canada; University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Saskatchewan Health Research Foundation","keywords":"Escherichia coli; Recombinant DNA; Pentachlorophenol; Enzyme; Strain (injury); Cloning (programming); Reductase; Biochemistry; Biology; Affinity chromatography; Gene; Chemistry","score_opus":0.008827338419746639,"score_gpt":0.21692160770291002,"score_spread":0.20809426928316338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968839547","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99765116,0.000090517686,0.000027912598,0.00096807076,0.0003839695,0.00023559624,0.0005552701,0.000018044806,0.00006943063],"genre_scores_gemma":[0.99883896,0.00010437985,0.00010022104,0.00026701798,0.00006578681,0.0000016334787,0.00048996776,0.0000056480617,0.00012636452],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990455,0.00009719924,0.0002957351,0.00031622156,0.000056625217,0.00018874061],"domain_scores_gemma":[0.99938905,0.000012778721,0.00027663956,0.00025176068,0.000015642232,0.000054110897],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010938384,0.0001391156,0.00014851616,0.000020373149,0.00009589125,0.000015522886,0.00023534318,0.000090476235,0.00084133924],"category_scores_gemma":[0.000027874612,0.00009762781,0.00004086315,0.00011034363,0.00023083601,0.00009234033,0.00010453132,0.000121540106,0.000067195826],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017150714,0.00006347571,0.005010563,0.000003555862,0.0000031617242,1.0858317e-7,0.00042342077,0.0000013002535,0.98964435,0.00002929361,0.0012156442,0.0035879803],"study_design_scores_gemma":[0.00032342362,0.00003014077,0.20853154,0.00003740186,0.000011012061,0.0000055723394,0.000014014423,0.00001431669,0.76968205,0.00011061406,0.021099461,0.00014045546],"about_ca_topic_score_codex":0.000027015078,"about_ca_topic_score_gemma":0.0000094931,"teacher_disagreement_score":0.2199623,"about_ca_system_score_codex":0.000038736114,"about_ca_system_score_gemma":0.000013503839,"threshold_uncertainty_score":0.9212075},"labels":[],"label_agreement":null},{"id":"W1969311201","doi":"10.1021/es001930l","title":"Sequential Anaerobic−Aerobic Treatment of Soil Contaminated with Weathered Aroclor 1260","year":2001,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":105,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Anaerobic exercise; Reductive dechlorination; Environmental chemistry; Chemistry; Soil contamination; Biodegradation; Contamination; Bioaugmentation; Soil water; Bioremediation; Environmental science; Biology; Ecology; Soil science; Organic chemistry; Physiology","score_opus":0.006838276439539735,"score_gpt":0.20183359437420723,"score_spread":0.19499531793466748,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969311201","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99637276,0.00004032865,0.00009157306,0.00035789213,0.00008823312,0.0003676489,0.000016837797,0.000092902264,0.002571836],"genre_scores_gemma":[0.9976994,0.00029417578,0.0008222199,0.000062674306,0.000012447487,0.0000143519355,0.000012403485,0.000014687719,0.0010676855],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99803734,0.000025150342,0.00029451452,0.00062977715,0.00044466084,0.0005685477],"domain_scores_gemma":[0.9992144,0.0000098630235,0.0001913967,0.00043781567,0.000004493538,0.00014204452],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014935352,0.00025513137,0.00025976877,0.00021706919,0.00023172588,0.000018124074,0.0005216573,0.00014950449,0.0038918944],"category_scores_gemma":[0.000006296416,0.00019062131,0.0000531697,0.0012095196,0.0037713228,0.00025111725,0.00019280838,0.00008884314,0.0006048773],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051134877,0.000365694,0.07981906,6.871358e-7,0.000009720482,0.00002835893,0.00015593847,0.00011973388,0.9000877,0.000023267494,0.000027833143,0.01931087],"study_design_scores_gemma":[0.0013640648,0.0015590788,0.055476356,0.000009298714,0.000027488088,0.00013367814,0.000507248,0.0001628985,0.9182576,0.000051137682,0.022107922,0.00034320605],"about_ca_topic_score_codex":0.00021289065,"about_ca_topic_score_gemma":0.00035661578,"teacher_disagreement_score":0.0243427,"about_ca_system_score_codex":0.00079965487,"about_ca_system_score_gemma":0.000030653388,"threshold_uncertainty_score":0.9989398},"labels":[],"label_agreement":null},{"id":"W1969643994","doi":"10.1016/j.biortech.2013.08.068","title":"Effect of biodiesel addition on microbial community structure in a simulated fuel storage system","year":2013,"lang":"en","type":"article","venue":"Bioresource Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Western University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biodiesel; Diesel fuel; Food science; Pulp and paper industry; Environmental science; Microbial population biology; Population; Biodiesel production; Biofuel; Waste management; Biology; Chemistry; Biotechnology; Bacteria; Engineering; Biochemistry","score_opus":0.003935407036965273,"score_gpt":0.1962343248380961,"score_spread":0.19229891780113084,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969643994","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99846697,0.000013510906,0.0000024358433,0.00014631926,0.00006707896,0.0005372827,0.00011835981,0.00015790851,0.00049010775],"genre_scores_gemma":[0.99978906,0.0000018173932,0.000055941284,0.000057859717,0.000009009351,0.0000051465613,0.0000456837,0.000011022059,0.000024485591],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988564,0.0002838777,0.00027110806,0.00020652609,0.00013015824,0.0002519155],"domain_scores_gemma":[0.9993162,0.0000926633,0.00015476663,0.00038183984,0.000011573268,0.000042914096],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00023176028,0.00017727815,0.00025781733,0.00022206777,0.00007395472,0.000010380488,0.0003635812,0.0003911343,0.001094388],"category_scores_gemma":[0.00009876022,0.00013927538,0.000041927153,0.00059215876,0.000365341,0.000046393987,0.0001832061,0.0003937229,0.0004912704],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007026846,0.00007225809,0.01972531,0.00006230751,0.000006924998,0.0000032608211,0.00017257931,0.0001436457,0.9755767,0.00001931066,0.0012661219,0.0028813197],"study_design_scores_gemma":[0.0030387442,0.002047937,0.09592596,0.00019434895,0.000024060928,0.000023448127,0.00062040845,0.0012951939,0.8909606,0.00007653191,0.005270426,0.00052237936],"about_ca_topic_score_codex":0.0008253027,"about_ca_topic_score_gemma":0.00024623435,"teacher_disagreement_score":0.08461613,"about_ca_system_score_codex":0.00021754068,"about_ca_system_score_gemma":0.000004276903,"threshold_uncertainty_score":0.99981874},"labels":[],"label_agreement":null},{"id":"W1970115761","doi":"10.4141/s00-051","title":"Carbon transformations by indigenous microbes in four hydrocarbon-contaminated soils under static remediation conditions","year":2001,"lang":"en","type":"article","venue":"Canadian Journal of Soil Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Soil water; Bioremediation; Environmental chemistry; Environmental remediation; Bioaugmentation; Chemistry; Bioavailability; Soil contamination; Contamination; Total petroleum hydrocarbon; Hydrocarbon; Environmental science; Total organic carbon; Soil science; Ecology; Biology","score_opus":0.008208407493440416,"score_gpt":0.20583566477912607,"score_spread":0.19762725728568564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970115761","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960332,0.000049173992,0.00007365981,0.0010072147,0.00022892635,0.0001432366,0.000033016575,0.0000053107456,0.0024262785],"genre_scores_gemma":[0.9992583,0.000072310984,0.000058499147,0.00047755314,0.000017447783,0.0000013455882,0.000007816663,0.000006105111,0.000100642595],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985215,0.00004708498,0.00043881292,0.00015900107,0.00035823352,0.00047536296],"domain_scores_gemma":[0.9990585,0.000029503823,0.0002029535,0.00010364434,0.000053502263,0.00055188895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071505015,0.00011286564,0.00013972893,0.00035459295,0.00024922285,0.000086081316,0.000377266,0.00006375698,0.00036469306],"category_scores_gemma":[0.00008352848,0.00010576614,0.000036083675,0.0012207199,0.0005074938,0.0006260444,0.000009598859,0.0001842982,0.000041574855],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013568869,0.00008319906,0.3405971,0.000007938959,0.0000119033975,0.00013306977,0.008965407,0.005875858,0.6379055,0.000030913172,0.0024320895,0.0039435104],"study_design_scores_gemma":[0.0016667921,0.00025083317,0.9392863,0.00010548355,0.0000341523,0.00042308588,0.0018597286,0.004793956,0.04712752,0.0010201068,0.0028307387,0.00060128805],"about_ca_topic_score_codex":0.028729187,"about_ca_topic_score_gemma":0.30693895,"teacher_disagreement_score":0.5986892,"about_ca_system_score_codex":0.0009966866,"about_ca_system_score_gemma":0.00088260934,"threshold_uncertainty_score":0.97773856},"labels":[],"label_agreement":null},{"id":"W1970193910","doi":"10.1023/b:bile.0000009457.42943.90","title":"Rhamnolipid production by Pseudomonas aeruginosa immobilised in polyvinyl alcohol beads","year":2003,"lang":"en","type":"article","venue":"Biotechnology Letters","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":48,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Rhamnolipid; Polyvinyl alcohol; Bioreactor; Aeration; Pseudomonas aeruginosa; Chemistry; Dilution; Chromatography; Pseudomonadaceae; Airlift; Biodegradation; Microbiology; Food science; Bacteria; Biology; Organic chemistry","score_opus":0.005909025890407899,"score_gpt":0.19816441836274215,"score_spread":0.19225539247233425,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970193910","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9713928,0.00003915755,0.000074611686,0.027021201,0.0004284857,0.00033447484,0.000008328065,0.0001446901,0.0005562538],"genre_scores_gemma":[0.996159,0.00006526744,0.00093389157,0.0025932896,0.000020320773,0.000012781691,0.000012724043,0.000013719812,0.00018898993],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985684,0.00007492359,0.00025557872,0.00052068906,0.00016439232,0.00041600564],"domain_scores_gemma":[0.9994934,0.000011853418,0.00008961589,0.00034813504,0.0000030870374,0.00005391374],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002554163,0.00018153992,0.00015853002,0.0001185488,0.000067957924,0.000012932899,0.00024229908,0.0003234372,0.0007011356],"category_scores_gemma":[0.00011049255,0.00017231422,0.000042660038,0.0005615719,0.00042129657,0.00011909653,0.00006460115,0.00027097357,0.00066637667],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008961658,0.00007438866,0.019957522,0.0000017288164,0.000004058273,0.0000051119655,0.000033297638,0.000007746084,0.93961984,0.000043289438,0.037810177,0.0024338546],"study_design_scores_gemma":[0.00045895923,0.00002841592,0.0063197175,0.0000055702053,0.000004332717,0.000020446729,0.000044162225,0.0000059519034,0.94753474,0.000019445248,0.045327462,0.00023079925],"about_ca_topic_score_codex":0.00017052024,"about_ca_topic_score_gemma":0.00012958018,"teacher_disagreement_score":0.02476622,"about_ca_system_score_codex":0.00031904338,"about_ca_system_score_gemma":0.0000072220155,"threshold_uncertainty_score":0.85651463},"labels":[],"label_agreement":null},{"id":"W1970252785","doi":"10.2134/jeq2000.00472425002900010039x","title":"Plant‐Bacterial Combinations to Phytoremediate Soil Contaminated with High Concentrations of 2,4,6‐Trinitrotoluene","year":2000,"lang":"en","type":"article","venue":"Journal of Environmental Quality","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Phytoremediation; Rhizosphere; Lolium perenne; Biology; Population; Agronomy; Perennial plant; Bioremediation; Trinitrotoluene; Soil water; Botany; Contamination; Bacteria; Chemistry; Ecology","score_opus":0.009863610618633473,"score_gpt":0.22300376297278035,"score_spread":0.21314015235414688,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970252785","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983767,0.0000072580024,0.000028353415,0.00026138153,0.00013792886,0.00024527393,0.00045195853,0.000006636756,0.00048449892],"genre_scores_gemma":[0.9989376,0.000056059722,0.00047416656,0.00021314852,0.00005244615,0.0000021428148,0.00004909347,0.00000962388,0.0002057129],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982472,0.00015648924,0.0007146751,0.00016243657,0.00051775627,0.00020141045],"domain_scores_gemma":[0.99910295,0.000062745275,0.00045918082,0.000157875,0.000010581228,0.00020667516],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00039526334,0.0001488858,0.00029916092,0.000038553535,0.0000769914,0.00001699144,0.00021249459,0.000065120854,0.013569097],"category_scores_gemma":[0.00002346313,0.00011812901,0.00007567182,0.00014775104,0.00024638596,0.00023878741,0.000036540325,0.00013167788,0.00019173184],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006649494,0.00093774596,0.065409675,0.0000060134516,0.00004773198,0.00001104681,0.00045959,0.00027436166,0.9286136,0.000031444313,0.0008219615,0.0027218584],"study_design_scores_gemma":[0.0025882798,0.00059776334,0.75608885,0.00002305175,0.000035808578,0.000024240275,0.00013130896,0.00000806061,0.23526967,0.000030577005,0.005011219,0.00019118928],"about_ca_topic_score_codex":0.00010788085,"about_ca_topic_score_gemma":0.00010887395,"teacher_disagreement_score":0.69334394,"about_ca_system_score_codex":0.00020866541,"about_ca_system_score_gemma":0.00002245876,"threshold_uncertainty_score":0.98733264},"labels":[],"label_agreement":null},{"id":"W1970364364","doi":"10.1021/bp0700962","title":"Polymer Selection for Biphenyl Degradation in a Solid-Liquid Two-Phase Partitioning Bioreactor","year":2007,"lang":"en","type":"article","venue":"Biotechnology Progress","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biphenyl; Biodegradation; Bioreactor; Polymer; Chemical engineering; Chemistry; Phase (matter); Degradation (telecommunications); Chromatography; Organic chemistry; Materials science","score_opus":0.014373477185168166,"score_gpt":0.30726006924752747,"score_spread":0.2928865920623593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970364364","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947625,0.00006421968,0.002955848,0.0013199262,0.00015544971,0.00048589756,0.000014129344,0.00017734345,0.00006469037],"genre_scores_gemma":[0.99662817,0.000011542904,0.0030357938,0.00012957957,0.00004151636,0.000028710907,0.00004509999,0.000012283217,0.00006729017],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988578,0.000019102645,0.00028416063,0.0003260693,0.00011479029,0.00039810766],"domain_scores_gemma":[0.9996519,0.000022594564,0.00013258323,0.00012529652,0.000012205698,0.00005540561],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039157475,0.00012868525,0.00012327151,0.00016494778,0.00010353679,0.000018003071,0.00014238223,0.00030027278,0.00021904008],"category_scores_gemma":[0.000047689155,0.000120817,0.0000378459,0.0005625315,0.0002548617,0.00013811578,0.000055891556,0.00012567206,0.000082786944],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022330687,0.00022877575,0.028404951,0.000004366174,0.0000057241064,0.000002308274,0.00005119765,0.0000017604167,0.9331169,0.00028511434,0.0002054903,0.037470117],"study_design_scores_gemma":[0.00132272,0.0003325408,0.0031463604,0.000011872325,0.000007193235,0.000008546673,0.00005114414,0.00030178818,0.9893163,0.000037194997,0.005302569,0.00016177492],"about_ca_topic_score_codex":0.00009413727,"about_ca_topic_score_gemma":0.0012637454,"teacher_disagreement_score":0.05619941,"about_ca_system_score_codex":0.00017266753,"about_ca_system_score_gemma":0.0000130328335,"threshold_uncertainty_score":0.49267742},"labels":[],"label_agreement":null},{"id":"W1970916547","doi":"10.1021/es049017y","title":"Laboratory Study of Treatment of Trichloroethene by Chemical Oxidation Followed by Bioremediation","year":2005,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Environmental Security Technology Certification Program","keywords":"Chemistry; Bioaugmentation; Biostimulation; Bioremediation; Permanganate; Reductive dechlorination; Environmental chemistry; Environmental remediation; Biodegradation; Manganese; Groundwater; Contamination; Organic chemistry","score_opus":0.0038961215986876236,"score_gpt":0.2082955506513126,"score_spread":0.20439942905262498,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970916547","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989983,0.00006723665,0.000022473516,0.00024385662,0.000047409936,0.00041104204,0.00006110137,0.000034668712,0.00011390012],"genre_scores_gemma":[0.9994061,0.00008783527,0.00034988162,0.000028709237,0.00000890853,0.000013661767,0.000023659786,0.0000073868155,0.00007385136],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984872,0.00002615478,0.00037072133,0.00041942275,0.0004355443,0.0002609941],"domain_scores_gemma":[0.9993586,0.000014223081,0.00025847054,0.00028594275,0.00000478621,0.000077961144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020871907,0.00015263115,0.00019907633,0.00014883743,0.00008032957,0.00000592361,0.00036692107,0.000120055236,0.00071351056],"category_scores_gemma":[0.000025547579,0.00013107367,0.000030035659,0.0009822337,0.0011793376,0.00023545983,0.0001258514,0.000053761596,0.00011012324],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013921906,0.0013821643,0.075186566,5.159625e-7,0.0000044234916,1.9581941e-7,0.0003010935,0.000013735925,0.9137836,0.0000018695886,0.0004698006,0.008842102],"study_design_scores_gemma":[0.0009224181,0.00082563853,0.0062863817,0.0000011773685,0.0000134321845,7.211385e-7,0.0004883464,0.00007166669,0.98622656,0.0000049993905,0.005036768,0.00012189159],"about_ca_topic_score_codex":0.000050675328,"about_ca_topic_score_gemma":0.00001721883,"teacher_disagreement_score":0.07244295,"about_ca_system_score_codex":0.00081457203,"about_ca_system_score_gemma":0.000016698945,"threshold_uncertainty_score":0.78124404},"labels":[],"label_agreement":null},{"id":"W1971703363","doi":"10.1007/s13273-012-0046-0","title":"Expression and characterization of a recombinant 2,3-dihydroxybiphenyl-1,2-dioxygenase from Pseudomonas","year":2012,"lang":"en","type":"article","venue":"Molecular & Cellular Toxicology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Innovates","funders":"","keywords":"Dioxygenase; Pseudomonas putida; Escherichia coli; Strain (injury); Biodegradation; Recombinant DNA; Biphenyl; Chemistry; Molecular mass; Biochemistry; Enzyme; Bacteria; Gene; Pseudomonas; Chromatography; Biology; Organic chemistry","score_opus":0.006864294106913282,"score_gpt":0.19663153559860447,"score_spread":0.1897672414916912,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971703363","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975672,0.00010543381,0.0013506471,0.00014072386,0.00033680824,0.00020444041,0.000016424241,0.000019550047,0.00025880424],"genre_scores_gemma":[0.9982254,0.000041470026,0.0011281191,0.0003061608,0.00002879262,0.0000054236175,0.00011159332,0.00001474863,0.00013831565],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989207,0.00015073695,0.00025303682,0.00024704542,0.00015360485,0.0002748996],"domain_scores_gemma":[0.9994579,0.000018183966,0.00015596727,0.00020969618,0.000007367062,0.00015087835],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017941452,0.00013973804,0.00018947716,0.000033369266,0.000048618764,0.000008584266,0.00011987453,0.00016675035,0.00208147],"category_scores_gemma":[0.000024189183,0.00012630172,0.00004684028,0.000111013906,0.0001245205,0.00012505443,0.00017509336,0.00008336333,0.00015618192],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021951437,0.00016680463,0.009929191,0.0000045848333,0.0000071915797,0.000007973679,0.00024937463,0.0000013583583,0.9885229,0.000028939883,0.00009867525,0.0009610921],"study_design_scores_gemma":[0.00038357105,0.000057315538,0.032845847,0.000007810811,0.000012777991,0.0000039455617,0.000013010032,0.00007612722,0.96239555,0.000068807705,0.0039952984,0.00013996143],"about_ca_topic_score_codex":0.000042815107,"about_ca_topic_score_gemma":0.000006055162,"teacher_disagreement_score":0.026127337,"about_ca_system_score_codex":0.000041636245,"about_ca_system_score_gemma":0.000007939804,"threshold_uncertainty_score":0.99883074},"labels":[],"label_agreement":null},{"id":"W1972367279","doi":"","title":"[Degradation of hydrocarbons and their derivatives by a microbial association based on Canadian pondweed].","year":2008,"lang":"en","type":"article","venue":"PubMed","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Naphthalene; Chemistry; Microbial biodegradation; Pollutant; Pseudomonas fluorescens; Biodegradation; Pseudomonas; Environmental chemistry; Microorganism; Phenol; Elodea canadensis; Toluene; Botany; Food science; Biology; Aquatic plant; Organic chemistry; Bacteria; Ecology","score_opus":0.008815397361847143,"score_gpt":0.15735360812101967,"score_spread":0.14853821075917253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972367279","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944116,0.0000074088243,0.000016375927,0.0011451916,0.000052367584,0.0002558964,0.00009862676,0.000011250161,0.00400131],"genre_scores_gemma":[0.9985314,0.000011630364,0.000040562933,0.0006710646,0.000009462718,0.000016909855,0.000042570267,0.0000050519097,0.00067136367],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993873,0.000040351977,0.0001183304,0.00014385617,0.000111528774,0.00019859872],"domain_scores_gemma":[0.99967456,0.000036966583,0.000092211456,0.00006949989,0.00000482982,0.00012192559],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015763531,0.00007842267,0.000084039944,0.00004386343,0.000079357305,0.000008383909,0.000062861305,0.0000642054,0.00009587678],"category_scores_gemma":[0.00008912209,0.000066552355,0.000021817494,0.00015065855,0.00006525639,0.00007001347,0.000011834581,0.000048378144,0.000013454147],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036825077,0.00013047935,0.54180443,0.0000040627588,0.000018898461,0.0000012606146,0.00055298925,0.00001684643,0.4012756,0.0000065898503,0.0379116,0.018240409],"study_design_scores_gemma":[0.0003457697,0.000018251449,0.870304,0.0000018574062,0.0000032859707,8.2415517e-7,0.000016884516,0.00020530006,0.12118485,0.000008048869,0.007803514,0.00010740572],"about_ca_topic_score_codex":0.0101714125,"about_ca_topic_score_gemma":0.010791742,"teacher_disagreement_score":0.3284996,"about_ca_system_score_codex":0.00027286043,"about_ca_system_score_gemma":0.000019282461,"threshold_uncertainty_score":0.99641997},"labels":[],"label_agreement":null},{"id":"W1972504566","doi":"10.1016/s0304-3894(01)00224-2","title":"Heavy metal removal from sediments by biosurfactants","year":2001,"lang":"en","type":"article","venue":"Journal of Hazardous Materials","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":411,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Zinc; Surfactin; Copper; Chemistry; Rhamnolipid; Extraction (chemistry); Metal; Pulmonary surfactant; Environmental chemistry; Sorption; Carbonate; Micelle; Inorganic chemistry; Chromatography; Adsorption; Organic chemistry; Aqueous solution; Geology; Bacillus subtilis; Bacteria","score_opus":0.009718192691089299,"score_gpt":0.2215437217738911,"score_spread":0.21182552908280178,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972504566","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963908,0.000078498735,0.00002271178,0.00074432656,0.0015153749,0.000099196135,0.00019644745,0.000016299611,0.0009363168],"genre_scores_gemma":[0.9969423,0.00022936038,0.0010899457,0.0008499068,0.00022638345,3.2779232e-7,0.000019799183,0.00001782884,0.000624151],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981395,0.00012840345,0.0007191762,0.0001893047,0.0005384755,0.0002851685],"domain_scores_gemma":[0.9990123,0.000026073665,0.0005899076,0.00016234076,0.000025628215,0.00018377372],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00056195946,0.00018382505,0.0003795153,0.00003951848,0.00007098215,0.000091581154,0.00031923054,0.00010706684,0.02163428],"category_scores_gemma":[0.00005644544,0.00013820158,0.000096218064,0.00012856883,0.00008159641,0.0003278394,0.00009566836,0.00009107647,0.0011219191],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022623899,0.00011932845,0.0035541018,0.0000014099558,0.000042587362,0.00014085881,0.000064070206,0.0000032266037,0.95341533,4.4278383e-7,0.041599143,0.0008332348],"study_design_scores_gemma":[0.0008704286,0.00014568905,0.007824096,0.000018738452,0.0000404877,0.00028147805,0.000023505108,0.0000022634135,0.88207674,0.000069420224,0.10846453,0.00018264866],"about_ca_topic_score_codex":0.00015203077,"about_ca_topic_score_gemma":0.000014510933,"teacher_disagreement_score":0.071338646,"about_ca_system_score_codex":0.00013774537,"about_ca_system_score_gemma":0.000020671952,"threshold_uncertainty_score":0.99965584},"labels":[],"label_agreement":null},{"id":"W1972788193","doi":"10.1016/s0043-1354(02)00151-3","title":"Comparison of anaerobic dechlorinating enrichment cultures maintained on tetrachloroethene, trichloroethene, cis-dichloroethene and vinyl chloride","year":2002,"lang":"en","type":"article","venue":"Water Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":282,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Dehalococcoides; Vinyl chloride; Enrichment culture; Chemistry; Reductive dechlorination; Electron donor; Environmental chemistry; Temperature gradient gel electrophoresis; Trichloroethylene; Biodegradation; Microbial consortium; Chloroform; Chloride; Microbiology; Bacteria; Microorganism; Organic chemistry; 16S ribosomal RNA; Biochemistry; Biology; Catalysis; Gene","score_opus":0.07478214817111738,"score_gpt":0.3568619555112789,"score_spread":0.2820798073401615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972788193","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9900153,0.00010438252,0.000025259009,0.001190004,0.00012802093,0.0005380791,0.000014053573,0.000055249573,0.007929641],"genre_scores_gemma":[0.9965402,0.00020012047,0.0004910186,0.00013666808,0.000085798565,0.00002408327,0.000016357699,0.00002980816,0.002475942],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962746,0.00028206024,0.0005978979,0.00065266644,0.0012845428,0.0009082505],"domain_scores_gemma":[0.99896085,0.00013980088,0.00011314533,0.00043010985,0.00007318336,0.0002829051],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.001736379,0.0002852663,0.00039533703,0.0002477754,0.000375834,0.00008769895,0.00051644765,0.00017260082,0.0042514554],"category_scores_gemma":[0.00019929747,0.00019067239,0.00008202694,0.0005786861,0.00052990305,0.00018377921,0.0004747874,0.0005538869,0.000873179],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030327524,0.0008155196,0.027245011,0.000046022866,0.000037406637,0.000017521086,0.0061758948,0.0001808103,0.946376,0.00025415097,0.0048641292,0.013684235],"study_design_scores_gemma":[0.0009452699,0.0008653236,0.010921934,0.000038655457,0.000011361349,0.0000059551776,0.00075264624,0.0012984888,0.97364837,0.00032368157,0.010883111,0.00030519976],"about_ca_topic_score_codex":0.00043235222,"about_ca_topic_score_gemma":0.00016928487,"teacher_disagreement_score":0.02727235,"about_ca_system_score_codex":0.00027485556,"about_ca_system_score_gemma":0.000006583034,"threshold_uncertainty_score":0.99990475},"labels":[],"label_agreement":null},{"id":"W1972823904","doi":"10.7901/2169-3358-2001-1-303","title":"Restoration of an Oil-Contaminated St. Lawrence River Shoreline: Bioremediation and Phytoremediation","year":2001,"lang":"en","type":"article","venue":"International Oil Spill Conference Proceedings","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Fisheries and Oceans Canada","funders":"","keywords":"Bioremediation; Phytoremediation; Environmental chemistry; Biodegradation; Scirpus; Phragmites; Nitrate; Hopanoids; Nutrient; Environmental science; Chemistry; Biostimulation; Contamination; Wetland; Ecology; Geology; Heavy metals; Biology","score_opus":0.014989923836052094,"score_gpt":0.23934783181707184,"score_spread":0.22435790798101973,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972823904","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920977,0.000011291704,0.000095556294,0.000821849,0.000339057,0.00006335792,0.00004143355,0.000055908342,0.0064738854],"genre_scores_gemma":[0.99726504,0.0004855824,0.0012263263,0.00019565345,0.00013879633,0.000009550173,0.00018654064,0.0000117406125,0.0004807653],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99838257,0.000015962876,0.00041509024,0.00040053553,0.0005938273,0.0001920232],"domain_scores_gemma":[0.9991047,0.000021307986,0.00035292347,0.000085302345,0.00030935832,0.00012641889],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00033270317,0.00018032291,0.00015906448,0.00011386848,0.00006832781,0.00008182268,0.00029289006,0.00013197077,0.0011495332],"category_scores_gemma":[0.0002071734,0.00017010444,0.00003126329,0.00026657546,0.00024799685,0.000962911,0.00009845233,0.00012224732,0.00005468398],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001978589,0.00017211279,0.19956236,0.00002522095,0.000021563867,0.0000039107526,0.0025134217,0.000016490736,0.67500687,0.0010748911,0.00080788333,0.12059745],"study_design_scores_gemma":[0.0033280763,0.00070791814,0.75772727,0.00022724994,0.00007912881,0.000058315156,0.0013128383,0.06347636,0.13107018,0.0019416554,0.03882487,0.0012461399],"about_ca_topic_score_codex":0.00024779755,"about_ca_topic_score_gemma":0.00031020452,"teacher_disagreement_score":0.5581649,"about_ca_system_score_codex":0.00014527344,"about_ca_system_score_gemma":0.000026379521,"threshold_uncertainty_score":0.99976355},"labels":[],"label_agreement":null},{"id":"W1973247410","doi":"10.1007/s00253-006-0786-7","title":"The Pseudozyma flocculosa actin promoter allows the strong expression of a recombinant protein in the Pseudozyma species","year":2007,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Recombinant DNA; Protein expression; Chemistry; Biology; Cell biology; Biochemistry; Gene","score_opus":0.007434361777932809,"score_gpt":0.20248246435997216,"score_spread":0.19504810258203936,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973247410","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9907316,0.00006793343,0.00006222364,0.007094952,0.00012019743,0.0010054674,0.000008401557,0.000025897874,0.00088335504],"genre_scores_gemma":[0.99892575,0.00010279237,0.00034289408,0.0003353339,0.000018623286,0.000024598032,0.000009486186,0.0000071178033,0.00023339527],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986176,0.00011764238,0.00038617227,0.00035330036,0.00006979356,0.00045549328],"domain_scores_gemma":[0.999183,0.00016533978,0.00021049731,0.00041200433,0.000006701396,0.000022435192],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013833736,0.0001891139,0.00019589419,0.000046821853,0.00030740423,0.00001789556,0.0006880512,0.0004715058,0.00012707734],"category_scores_gemma":[0.000041398896,0.00008311367,0.000043377233,0.00029102067,0.0015812907,0.000031769323,0.00036681397,0.00047761606,0.00005351057],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000118657845,0.00007119475,0.00097261433,0.0000039482798,0.000006759889,0.0000030617746,0.00030651453,2.8082064e-7,0.9886598,0.0016556456,0.0012336874,0.006967817],"study_design_scores_gemma":[0.00043893317,0.00011537247,0.007367298,0.0000115621815,0.000006876795,0.00005310281,0.0011690079,0.000002168641,0.9361861,0.00035941118,0.054158818,0.00013139863],"about_ca_topic_score_codex":0.000044918514,"about_ca_topic_score_gemma":0.0009156329,"teacher_disagreement_score":0.05292513,"about_ca_system_score_codex":0.00003821816,"about_ca_system_score_gemma":0.00001090786,"threshold_uncertainty_score":0.58263314},"labels":[],"label_agreement":null},{"id":"W1973629032","doi":"10.1002/cssc.200800125","title":"Phytoremediation of Organic Contaminants in Soil and Groundwater","year":2008,"lang":"en","type":"review","venue":"ChemSusChem","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":162,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Phytoremediation; Groundwater; Environmental science; Environmental chemistry; Contamination; Soil contamination; Environmental remediation; Groundwater contamination; Environmental engineering; Chemistry; Soil water; Soil science; Aquifer; Geology; Ecology; Biology","score_opus":0.021197399917715,"score_gpt":0.24545334651599937,"score_spread":0.22425594659828438,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973629032","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.051910084,0.9463196,0.0000019887534,0.000009723731,0.00016724732,0.0004087998,0.000012963545,0.00001643025,0.001153192],"genre_scores_gemma":[0.009403382,0.99009913,0.00004487388,0.00001888965,0.000040451887,0.0000063671782,0.000056548262,0.000019720015,0.0003106272],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99884516,0.000036326463,0.00044698283,0.0003043889,0.00017570362,0.00019145606],"domain_scores_gemma":[0.99946094,0.000037507794,0.00026449902,0.00016855483,0.0000065538156,0.000061974155],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011251565,0.00022476715,0.00066352554,0.000052646694,0.000021256456,0.0000074991876,0.00015150357,0.0002529169,0.0006851932],"category_scores_gemma":[0.000040833806,0.0001777329,0.00008279042,0.00026305334,0.00014439464,0.00008241857,0.00012633915,0.00015602857,0.0002544415],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009026409,0.00024350917,0.007991058,0.0035400237,0.00003551103,0.000021622885,0.00054434076,9.5218624e-8,0.017657047,0.0000022260379,0.0040861736,0.96586937],"study_design_scores_gemma":[0.00040566456,0.000032331714,0.0017612267,0.0009554919,0.000043404,0.0000311765,0.000013391871,0.0000024318772,0.009904768,0.0000044400244,0.9864781,0.00036757666],"about_ca_topic_score_codex":0.000038119804,"about_ca_topic_score_gemma":0.0001723149,"teacher_disagreement_score":0.9823919,"about_ca_system_score_codex":0.00016130068,"about_ca_system_score_gemma":0.00003368631,"threshold_uncertainty_score":0.75023854},"labels":[],"label_agreement":null},{"id":"W1974852420","doi":"10.1007/s11274-007-9503-7","title":"Phenanthrene stimulates the degradation of pyrene and fluoranthene by Burkholderia sp. VUN10013","year":2007,"lang":"en","type":"article","venue":"World Journal of Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Royal Golden Jubilee (RGJ) Ph.D. Programme; Thailand Research Fund","keywords":"Fluoranthene; Phenanthrene; Pyrene; Anthracene; Chemistry; Environmental chemistry; Degradation (telecommunications); Biodegradation; Organic chemistry","score_opus":0.005886419388120294,"score_gpt":0.2089207872870491,"score_spread":0.2030343678989288,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974852420","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99355936,0.0018390358,0.00030268845,0.0039924006,0.00015883951,0.00008272124,0.000017295073,0.000008423393,0.0000392193],"genre_scores_gemma":[0.99745536,0.001254652,0.00088799,0.00022726881,0.000022852477,1.3302517e-7,0.000005855139,0.000004784197,0.00014111206],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99914354,0.000047323538,0.00041897126,0.00014601706,0.000043894048,0.00020024889],"domain_scores_gemma":[0.9993591,0.0000988917,0.00037793795,0.0001032099,0.000018930892,0.00004194816],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006753631,0.00011776164,0.00022880021,0.000110234156,0.000088182904,0.0000064308742,0.00019016619,0.00021488978,0.00022781608],"category_scores_gemma":[0.000038718696,0.00006999521,0.0000343651,0.00023357292,0.0011106378,0.000054980774,0.00011236706,0.00022421454,0.0000062468584],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009020634,0.000040837404,0.0085064825,0.0000030224778,0.000023383363,0.0000031739853,0.00003563516,0.000001636512,0.9730086,0.000059168022,0.0022096783,0.016018212],"study_design_scores_gemma":[0.00058101036,0.00018914985,0.0058593457,0.000015079053,0.000026075277,0.00025068584,0.00007800746,0.0000068702197,0.972283,0.00015540014,0.020464903,0.00009045295],"about_ca_topic_score_codex":0.00003568313,"about_ca_topic_score_gemma":0.00028248018,"teacher_disagreement_score":0.018255224,"about_ca_system_score_codex":0.000021060623,"about_ca_system_score_gemma":0.000007555549,"threshold_uncertainty_score":0.40921912},"labels":[],"label_agreement":null},{"id":"W1974941009","doi":"10.1023/b:wate.0000049178.93865.d4","title":"Biodegradation of Monoethanolamine, Ethylene Glycol and Triethylene Glycol in Laboratory Bioreactors","year":2004,"lang":"en","type":"article","venue":"Water Air & Soil Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":47,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Imperial Oil (Canada); University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biodegradation; Ethylene glycol; Triethylene glycol; Chemistry; Bioreactor; Anaerobic exercise; Ammonium; Environmental chemistry; Aeration; Nuclear chemistry; Organic chemistry","score_opus":0.004842610147954932,"score_gpt":0.19184817867450057,"score_spread":0.18700556852654565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974941009","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982157,0.000037567588,0.000051432326,0.0010220153,0.00012048281,0.00026746443,0.000052651478,0.000027510292,0.00020517352],"genre_scores_gemma":[0.99939203,0.000070853624,0.00018901241,0.00019972584,0.000023444865,0.000006575095,0.00003996682,0.000010162838,0.00006819774],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989082,0.0000550524,0.00031352328,0.0002702203,0.00020826826,0.00024474127],"domain_scores_gemma":[0.9996681,0.0000061805536,0.000089506924,0.00014826193,0.000014056473,0.00007388273],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026182973,0.00014826652,0.00015720131,0.000096708776,0.00004775788,0.000010793776,0.00009254235,0.0001479376,0.00014393961],"category_scores_gemma":[0.000018435427,0.000113296286,0.00003193137,0.0003084983,0.00017268516,0.00028288222,0.00006735923,0.0000959047,0.00012649172],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055914472,0.00010031626,0.01991148,0.000009486703,0.000003845115,0.0000018566026,0.0007144988,0.00021962196,0.9769782,0.000008898457,0.000080787104,0.0019151038],"study_design_scores_gemma":[0.0009995239,0.00007685782,0.2027121,0.000016286402,0.000006216528,0.0000012827741,0.00005203489,0.000031680258,0.79509956,0.00010084661,0.00077176717,0.00013182974],"about_ca_topic_score_codex":0.0015698562,"about_ca_topic_score_gemma":0.0011677372,"teacher_disagreement_score":0.18280062,"about_ca_system_score_codex":0.00022995913,"about_ca_system_score_gemma":0.000022495564,"threshold_uncertainty_score":0.46200886},"labels":[],"label_agreement":null},{"id":"W1975127267","doi":"10.1016/j.marpolbul.2014.07.037","title":"Assessing weathered Endicott oil biodegradation in brackish water","year":2014,"lang":"en","type":"article","venue":"Marine Pollution Bulletin","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Bedford Institute of Oceanography; Fisheries and Oceans Canada","funders":"","keywords":"Biodegradation; Salinity; Brackish water; Nutrient; Environmental chemistry; Chemistry; Biomass (ecology); Heterotroph; Hydrocarbon; Dispersant; Environmental science; Bacteria; Ecology; Biology; Organic chemistry","score_opus":0.007970854641852375,"score_gpt":0.20977389368422364,"score_spread":0.20180303904237126,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975127267","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9467022,0.0000026515706,0.00023547503,0.009080923,0.000182776,0.00006162827,0.0000044288204,0.000055985518,0.043673962],"genre_scores_gemma":[0.9925226,0.000011928243,0.001005885,0.0010956718,0.00005445151,0.0000029525766,0.00006335658,0.000009724824,0.005233439],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99893,0.00012112592,0.00024267426,0.00025240466,0.0001911826,0.00026262802],"domain_scores_gemma":[0.9997124,0.00001336035,0.000060043294,0.00014606671,0.0000056509084,0.00006244682],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0004901823,0.00011647402,0.000107720705,0.000055621425,0.000079532685,0.00007886172,0.000117784206,0.00007918702,0.025908403],"category_scores_gemma":[0.000055547356,0.00009018064,0.000033772467,0.00012721434,0.00006655637,0.000116959585,0.0001595558,0.0001010855,0.004530952],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003839355,0.00021128483,0.12098002,0.000012814455,0.0000048706875,0.000004287276,0.00022566918,0.00012961701,0.56506526,0.000108419845,0.01679232,0.29642704],"study_design_scores_gemma":[0.0009206899,0.000031327178,0.3310469,0.0000142382005,0.000005495666,0.000007835731,0.000040478782,0.00073799427,0.061857734,0.00013252844,0.60492253,0.0002822502],"about_ca_topic_score_codex":0.0008963725,"about_ca_topic_score_gemma":0.0004648134,"teacher_disagreement_score":0.5881302,"about_ca_system_score_codex":0.00014302079,"about_ca_system_score_gemma":0.0000037793407,"threshold_uncertainty_score":0.99624413},"labels":[],"label_agreement":null},{"id":"W1975261957","doi":"10.1021/es404122y","title":"Bioremediation of Chlorinated Ethenes in Fractured Bedrock and Associated Changes in Dechlorinating and Nondechlorinating Microbial Populations","year":2014,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph; University of Toronto","funders":"","keywords":"Dehalococcoides; Bioaugmentation; Bioremediation; Biostimulation; Vinyl chloride; Environmental chemistry; Chemistry; Reductive dechlorination; Groundwater; Population; DPSIR; Contamination; Ecology; Geology; Biodegradation; Biology","score_opus":0.007867166923082843,"score_gpt":0.22103318556726745,"score_spread":0.2131660186441846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975261957","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99899554,0.000031397845,0.000021732354,0.00051591545,0.0000744515,0.00021837269,0.00000782319,0.000030056426,0.000104715196],"genre_scores_gemma":[0.99892676,0.00006363654,0.00091512233,0.000052017214,0.0000072610555,0.000007664765,0.00000769044,0.000007559567,0.000012291106],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986418,0.00003781672,0.00029666506,0.00043539304,0.0002466922,0.00034162423],"domain_scores_gemma":[0.9995615,0.000041460895,0.00020039018,0.00013511241,0.00000381795,0.000057720164],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00073233125,0.00014506764,0.00019276781,0.000498669,0.00012872493,0.000014961011,0.00021168703,0.00017746662,0.00008091168],"category_scores_gemma":[0.00031254956,0.00014253838,0.000011348642,0.0011665975,0.0009874454,0.00023406434,0.00035796806,0.00018227367,0.000007013353],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000032403602,0.000042516644,0.47345,0.0000020871166,4.953678e-7,5.388563e-7,0.00025830703,0.000038284204,0.5188979,0.000040660398,7.456571e-7,0.0072652525],"study_design_scores_gemma":[0.0004716046,0.00008556702,0.77517533,0.000020081507,0.0000027099725,0.000003393076,0.00023572864,0.0017383024,0.2216057,0.0004359445,0.00008555516,0.00014006649],"about_ca_topic_score_codex":0.0002660808,"about_ca_topic_score_gemma":0.002405537,"teacher_disagreement_score":0.30172533,"about_ca_system_score_codex":0.0002920777,"about_ca_system_score_gemma":0.0000070422307,"threshold_uncertainty_score":0.58125466},"labels":[],"label_agreement":null},{"id":"W1975331137","doi":"10.1016/s0022-0981(00)00317-8","title":"Alteration and release of aliphatic compounds by the polychaete Nereis virens (Sars) experimentally fed with hydrocarbons","year":2001,"lang":"en","type":"article","venue":"Journal of Experimental Marine Biology and Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Rimouski","funders":"","keywords":"Biology; Polychaete; Feces; Algae; Hydrocarbon; Environmental chemistry; Ingestion; Ecology; Biochemistry","score_opus":0.006455489414946004,"score_gpt":0.23332283365448395,"score_spread":0.22686734423953794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975331137","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978905,0.00024677507,0.000016871702,0.0006857156,0.00012138759,0.00011028982,0.0000037021618,0.0000033709903,0.00092144386],"genre_scores_gemma":[0.99886143,0.00022941247,0.00023217544,0.000536997,0.00003120115,0.0000023507732,0.000009971166,0.0000055261685,0.00009092342],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992193,0.00010473942,0.00031170616,0.00014005316,0.00006930498,0.0001548912],"domain_scores_gemma":[0.9995024,0.00005262144,0.00028543052,0.00007586981,0.0000066272623,0.00007703766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015339715,0.00012100932,0.00021407989,0.00003252325,0.00010740633,0.000011048663,0.00010242883,0.0000790038,0.00044958308],"category_scores_gemma":[0.000009448024,0.00007411015,0.000029340217,0.000059074937,0.00054219546,0.00010048497,0.00013147414,0.00009374549,0.000003892763],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043022615,0.00014387992,0.18120204,8.967057e-7,0.000034062065,0.000008542677,0.00024287317,7.683169e-7,0.8168809,0.000050572933,0.00048615047,0.0005191121],"study_design_scores_gemma":[0.004849257,0.0066799535,0.18381485,0.000015144892,0.00007244657,0.0023730712,0.0013449758,0.00039398312,0.79559064,0.0003115021,0.0041784015,0.00037574134],"about_ca_topic_score_codex":0.00017205952,"about_ca_topic_score_gemma":0.00012584253,"teacher_disagreement_score":0.021290211,"about_ca_system_score_codex":0.00004915384,"about_ca_system_score_gemma":0.000011338521,"threshold_uncertainty_score":0.49226195},"labels":[],"label_agreement":null},{"id":"W1975385732","doi":"10.1080/10889860091114239","title":"Controlled Field Study on the Use of Nitrate and Oxygen for Bioremediation of a Gasoline Source Zone","year":2000,"lang":"en","type":"article","venue":"Bioremediation Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"McMaster University","keywords":"Environmental chemistry; Chemistry; Bioremediation; Nitrate; Gasoline; Hydrocarbon; Biotransformation; Electron acceptor; Denitrifying bacteria; BTEX; Benzene; Ethylbenzene; Phenanthrene; Anoxic waters; Toluene; Denitrification; Contamination; Organic chemistry; Nitrogen; Ecology","score_opus":0.035172480393561134,"score_gpt":0.23822446541297557,"score_spread":0.20305198501941443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975385732","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99633205,0.000015607267,0.0012361101,0.0013557537,0.000118128504,0.0008642495,0.000023909182,0.000007939369,0.000046267036],"genre_scores_gemma":[0.9984629,0.00012419865,0.00045442348,0.0004694934,0.00012421185,0.000009914931,0.0000069953708,0.000008872524,0.00033896771],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99857605,0.00014991434,0.0005801074,0.00015239952,0.00038110837,0.00016040061],"domain_scores_gemma":[0.9987899,0.00045930617,0.00046022248,0.00013991342,0.00006299467,0.00008765734],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008024218,0.00012652297,0.00024137009,0.000065086606,0.000119975775,0.000038554754,0.00013362824,0.00006961847,0.0014781826],"category_scores_gemma":[0.00045747345,0.00007880954,0.00008759055,0.00017952551,0.00009008646,0.00015177354,0.000019115067,0.00011166597,0.000021169793],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0049121534,0.0014321097,0.1667769,0.000020265019,0.00020055262,0.0000024662183,0.0044855215,0.0014905703,0.72830826,0.00003211759,0.019904565,0.0724345],"study_design_scores_gemma":[0.038121775,0.0078754015,0.6516504,0.00012361862,0.00048903306,0.000030976888,0.0019698222,0.019870361,0.23864359,0.00019313404,0.04007718,0.00095467037],"about_ca_topic_score_codex":0.000026938182,"about_ca_topic_score_gemma":0.000036076926,"teacher_disagreement_score":0.4896647,"about_ca_system_score_codex":0.000030563322,"about_ca_system_score_gemma":0.00002133964,"threshold_uncertainty_score":0.9994346},"labels":[],"label_agreement":null},{"id":"W1975418002","doi":"10.1016/s0304-3894(03)00062-1","title":"Landfarming operation of oily sludge in arid region—human health risk assessment","year":2003,"lang":"en","type":"article","venue":"Journal of Hazardous Materials","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":84,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Arid; Human health; Environmental science; Environmentally friendly; Waste management; Environmental engineering; Environmental protection; Engineering; Risk analysis (engineering); Environmental health; Business","score_opus":0.014608103361342434,"score_gpt":0.2754560619879583,"score_spread":0.26084795862661586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975418002","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984163,0.000022003562,0.00013074018,0.0002994819,0.00035943824,0.00012873925,0.000012283505,0.000003232461,0.0006278024],"genre_scores_gemma":[0.9982561,0.00016170162,0.0013111738,0.00016801717,0.00004066746,6.4077165e-7,0.000002872474,0.0000065159284,0.00005232857],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998423,0.00033331005,0.00075326336,0.00009881229,0.00024137803,0.0001502736],"domain_scores_gemma":[0.99894226,0.000016249473,0.0008593902,0.00009527989,0.000019869614,0.00006697223],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0016175942,0.00008649109,0.0002879117,0.000063390675,0.00006091978,0.000037872782,0.00010882158,0.00004616062,0.0011410948],"category_scores_gemma":[0.00005772981,0.00006654398,0.000040621522,0.000081374834,0.000036253885,0.00016766797,0.000022798651,0.00008454947,0.000019665726],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026273085,0.00012040103,0.06729891,0.000015617765,0.000007724958,0.000013024201,0.00028606426,0.00018274743,0.9298109,0.0000622308,0.0016646086,0.000511492],"study_design_scores_gemma":[0.0020126116,0.0005636915,0.3407242,0.00010870262,0.000017316144,0.00012802612,0.00018249899,0.000009487793,0.6495292,0.00033507257,0.0061867135,0.00020246809],"about_ca_topic_score_codex":0.0001938916,"about_ca_topic_score_gemma":0.00020168151,"teacher_disagreement_score":0.2802817,"about_ca_system_score_codex":0.00020370631,"about_ca_system_score_gemma":0.000061159,"threshold_uncertainty_score":0.999772},"labels":[],"label_agreement":null},{"id":"W1975439729","doi":"10.1109/oceans.2014.7003019","title":"Production of biodispersants for oil spill remediation in Harsh environment using glycerol from the conversion of fish oil to biodiesel","year":2014,"lang":"en","type":"article","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Dispersant; Petroleum; Environmental science; Biodiesel; Biodiesel production; Waste management; Diesel fuel; Chemistry; Engineering","score_opus":0.018371682204457895,"score_gpt":0.21538924266733744,"score_spread":0.19701756046287955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975439729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99774766,0.0000037738157,0.00010602302,0.0015138027,0.00022939162,0.00014291343,0.00007029768,0.000006225294,0.00017988517],"genre_scores_gemma":[0.9971643,0.00006686325,0.0020842683,0.00046211405,0.00004177897,0.00000342995,0.000032542524,0.0000052381865,0.00013945076],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990822,0.000049595015,0.00028573582,0.000246218,0.00020001229,0.00013624685],"domain_scores_gemma":[0.9995448,0.00005431156,0.00015688987,0.0001931689,0.000009791108,0.000041049436],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036871093,0.000090891255,0.00013140198,0.000031149793,0.00004374854,0.000005977322,0.00013763853,0.000058150163,0.00068421115],"category_scores_gemma":[0.00013372452,0.00006477248,0.000039248902,0.00012857538,0.00010674804,0.000082758,0.00007391726,0.00003402785,0.000056912293],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008930279,0.00006191476,0.04548102,0.000014169686,0.000004344788,2.9091124e-8,0.0005080541,0.00037141427,0.94253206,0.0000018107107,0.0022619453,0.008673959],"study_design_scores_gemma":[0.00072397344,0.00009190107,0.07908654,0.000033155597,0.000016512684,1.9258124e-7,0.00025485718,0.0025871722,0.90773904,0.000015117792,0.009314599,0.0001369621],"about_ca_topic_score_codex":0.001221637,"about_ca_topic_score_gemma":0.0005106996,"teacher_disagreement_score":0.034793023,"about_ca_system_score_codex":0.00011701129,"about_ca_system_score_gemma":0.0000060202547,"threshold_uncertainty_score":0.74916327},"labels":[],"label_agreement":null},{"id":"W1975541796","doi":"10.1139/w01-108","title":"Characterization of hybrid biphenyl dioxygenases obtained by recombining<i>Burkholderia</i>sp. strain LB400<i>bphA</i>with the homologous gene of<i>Comamonas testosteroni</i>B-356","year":2001,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Comamonas testosteroni; Protein subunit; Biphenyl; Enzyme; Strain (injury); Biology; Dioxygenase; Stereochemistry; Gene; Chemistry; Biochemistry; Organic chemistry","score_opus":0.007256932912898423,"score_gpt":0.17508640302608505,"score_spread":0.16782947011318664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975541796","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972465,0.00016924374,0.00015605536,0.0010605343,0.00026025652,0.00019380418,0.0007826981,0.000004957083,0.00012593609],"genre_scores_gemma":[0.99830306,0.00012547283,0.00024823693,0.00088013144,0.00004759732,0.0000012509144,0.00016456046,0.00001803857,0.00021165183],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985081,0.00019453792,0.00059962046,0.00020582456,0.000088954934,0.0004029546],"domain_scores_gemma":[0.9985811,0.00006635852,0.00080168183,0.00022020393,0.00007746727,0.00025317553],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00041716234,0.00020282042,0.00038092458,0.0001100236,0.00010843067,0.000017955534,0.00049207977,0.00009732758,0.0010958984],"category_scores_gemma":[0.0000491533,0.00013770243,0.00009424888,0.00027450954,0.0006474421,0.00011678545,0.00003462551,0.00018501857,0.000019719002],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006115265,0.00004192376,0.0213781,0.0000047907424,0.00004151127,0.00005904253,0.00020048839,0.000012589498,0.9717977,0.0000016599594,0.004653488,0.001747545],"study_design_scores_gemma":[0.0010907789,0.00081679935,0.025027791,0.000037913193,0.000052207684,0.0020229286,0.00010888288,0.000004169973,0.9209893,0.000014929523,0.049575012,0.00025933978],"about_ca_topic_score_codex":0.0019360493,"about_ca_topic_score_gemma":0.009724269,"teacher_disagreement_score":0.05080846,"about_ca_system_score_codex":0.00013578153,"about_ca_system_score_gemma":0.00026120187,"threshold_uncertainty_score":0.99981725},"labels":[],"label_agreement":null},{"id":"W1975609262","doi":"10.1016/j.chemosphere.2010.10.072","title":"Comparison of the effects of variable site temperatures and constant incubation temperatures on the biodegradation of petroleum hydrocarbons in pilot-scale experiments with field-aged contaminated soils from a cold regions site","year":2010,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Biodegradation; Environmental science; Contamination; Petroleum; Environmental chemistry; Soil contamination; Soil water; Environmental engineering; Waste management; Chemistry; Ecology; Soil science; Biology; Engineering","score_opus":0.005467001497419544,"score_gpt":0.2102841028611538,"score_spread":0.20481710136373424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975609262","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989105,0.000047873542,0.000009506821,0.0001585826,0.000069881775,0.0003666539,0.000030701918,0.0000066471457,0.0003996677],"genre_scores_gemma":[0.99956024,0.000008050437,0.00019905053,0.00013077942,0.000005307295,0.000007723423,0.000018015362,0.0000058983987,0.00006495452],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992121,0.00007961101,0.00023437075,0.0001766102,0.00019702801,0.00010027037],"domain_scores_gemma":[0.9992471,0.00024087368,0.00022941071,0.00024222498,0.0000113356955,0.0000290764],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011210526,0.00011692534,0.00020038825,0.000009350236,0.000066911816,0.0000138150035,0.00012950377,0.000079691185,0.00009406611],"category_scores_gemma":[0.00008233388,0.00006608504,0.000022027596,0.000212905,0.00023831995,0.000056552206,0.000050246614,0.00020723192,0.0000012976994],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011610726,0.00014810429,0.2497652,0.000011726154,0.000008262294,2.301823e-7,0.000726558,0.0000070766373,0.7487604,0.000047103036,0.0003952775,0.00001396277],"study_design_scores_gemma":[0.00073981046,0.0001958956,0.13135107,0.000100976235,0.000015026108,3.7744775e-7,0.00021875289,0.00026577053,0.8669893,0.000027805123,0.000026386564,0.00006884127],"about_ca_topic_score_codex":0.000894906,"about_ca_topic_score_gemma":0.002562153,"teacher_disagreement_score":0.11841414,"about_ca_system_score_codex":0.00002283396,"about_ca_system_score_gemma":0.000017934006,"threshold_uncertainty_score":0.26948696},"labels":[],"label_agreement":null},{"id":"W1975782626","doi":"10.1139/w08-053","title":"Biological treatment and toxicity of low concentrations of oily wastewater (bilgewater)","year":2008,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Office of Naval Research","keywords":"Wastewater; Biodegradation; Pulp and paper industry; Chemistry; Environmental science; Environmental chemistry; Waste management; Kerosene; Sewage treatment; Phenanthrene; Environmental engineering; Organic chemistry","score_opus":0.018563395420003473,"score_gpt":0.19431411397237908,"score_spread":0.17575071855237562,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975782626","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99922216,0.000106389954,0.0000045526212,0.00021671131,0.000106997686,0.00006779136,0.00011688585,9.566894e-7,0.00015757371],"genre_scores_gemma":[0.99941707,0.00014018083,0.00025387647,0.0000972525,0.000016347587,2.048601e-7,0.000008839518,0.0000024272172,0.000063782776],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993259,0.00006672472,0.0003295042,0.000089778936,0.000020232761,0.0001678704],"domain_scores_gemma":[0.99951285,0.000023656643,0.00019109836,0.00006490192,0.000024400975,0.00018308533],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009430564,0.000079376616,0.00021460606,0.00004797623,0.00004738515,0.000002267447,0.000100918216,0.0000919392,0.0012118341],"category_scores_gemma":[0.000022830238,0.000052259224,0.000054759712,0.000059154747,0.0006776504,0.000036863054,0.000012481841,0.0000479706,0.0000137212555],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001535847,0.000024851295,0.10264579,0.0000018244357,0.000013668219,0.000013322146,0.00041969237,0.000008336718,0.896001,0.000004608275,0.0006874653,0.0001640865],"study_design_scores_gemma":[0.0005194887,0.00051557436,0.029585622,0.00000989564,0.000007973514,0.0004375375,0.000045848632,0.0000012629014,0.96366966,0.0000118398275,0.0051269745,0.00006832761],"about_ca_topic_score_codex":0.00086823315,"about_ca_topic_score_gemma":0.0045782784,"teacher_disagreement_score":0.07306017,"about_ca_system_score_codex":0.00009349452,"about_ca_system_score_gemma":0.00012641426,"threshold_uncertainty_score":0.9997012},"labels":[],"label_agreement":null},{"id":"W1976028525","doi":"10.1016/j.jconhyd.2005.08.002","title":"Analysis of anaerobic BTX biodegradation in a subarctic aquifer using isotopes and benzylsuccinates","year":2005,"lang":"en","type":"article","venue":"Journal of Contaminant Hydrology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; New York State Department of Environmental Conservation","keywords":"Toluene; Biodegradation; Environmental chemistry; Benzene; Chemistry; Isotope analysis; Isotopes of carbon; Metabolite; Geology; Total organic carbon; Organic chemistry","score_opus":0.009342487640417412,"score_gpt":0.23760107464216768,"score_spread":0.22825858700175025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976028525","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99909395,0.00017676108,0.00013451476,0.00045457899,0.000043284024,0.000055131837,0.0000031710083,0.000001435285,0.000037148333],"genre_scores_gemma":[0.9988613,0.00014876331,0.0007897486,0.00016066789,0.000016623551,1.6151881e-7,0.0000016254028,0.0000031380018,0.000017962653],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990404,0.00008904179,0.000491907,0.00010922073,0.00012731824,0.00014206815],"domain_scores_gemma":[0.99939865,0.00005315172,0.00041020368,0.00006874493,0.000020342482,0.000048913425],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046167398,0.00008129894,0.00032947926,0.00031397142,0.00002281743,0.000007150027,0.00009725152,0.00007526117,0.0004390556],"category_scores_gemma":[0.00004249996,0.000063218235,0.00006857932,0.00044809523,0.00010217281,0.00019840016,0.000036543523,0.00009498198,0.0000044722165],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005730372,0.000070082664,0.64054084,0.0000028006968,0.00006437909,0.0000081935605,0.00030349262,0.0014146212,0.353334,0.000008315963,0.000012060094,0.0041838866],"study_design_scores_gemma":[0.0007934975,0.00024540257,0.9516072,0.000012492198,0.0003009309,0.000035728386,0.000065891865,0.022778783,0.023273498,0.000019779249,0.0007653764,0.00010140613],"about_ca_topic_score_codex":0.00026273166,"about_ca_topic_score_gemma":0.002433983,"teacher_disagreement_score":0.3300605,"about_ca_system_score_codex":0.000089708614,"about_ca_system_score_gemma":0.000013980544,"threshold_uncertainty_score":0.4807351},"labels":[],"label_agreement":null},{"id":"W1976105734","doi":"10.1007/s00253-011-3125-6","title":"Effect of monorhamnolipid on the degradation of n-hexadecane by Candida tropicalis and the association with cell surface properties","year":2011,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":64,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Northern British Columbia","funders":"","keywords":"Hexadecane; Candida tropicalis; Biodegradation; Bioavailability; Chemistry; Degradation (telecommunications); Yeast; Zeta potential; Micelle; Cell envelope; Bioremediation; Chromatography; Biochemistry; Organic chemistry; Biology; Materials science; Bacteria; Aqueous solution; Nanotechnology; Escherichia coli","score_opus":0.004024673108269114,"score_gpt":0.1488592577009773,"score_spread":0.14483458459270818,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976105734","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99799275,0.00008223077,0.000014773654,0.00097627594,0.000019002566,0.00036913538,0.000023177527,0.000012584373,0.0005100409],"genre_scores_gemma":[0.9994691,0.00018709702,0.00006634448,0.00015378317,0.0000020574619,0.0000056025615,0.000007765945,0.0000038105725,0.00010445205],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993908,0.00011391304,0.00015300329,0.00017380889,0.000036252542,0.00013225347],"domain_scores_gemma":[0.99951637,0.00013727442,0.00019905556,0.00012888573,0.0000057956177,0.000012597177],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035624998,0.00010585533,0.00019158359,0.00001555266,0.00007025373,0.0000027294927,0.0001281425,0.0002626764,0.000055430315],"category_scores_gemma":[0.000021790382,0.000045137076,0.000015112028,0.00010202614,0.0010957032,0.000013104233,0.00007199051,0.00014303341,0.000007756564],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050833833,0.000024902707,0.009900526,0.000008781971,0.000018770861,6.7471206e-8,0.00013531795,4.4470033e-7,0.9878181,0.00046535544,0.000431318,0.00068807235],"study_design_scores_gemma":[0.0008948308,0.00038923335,0.00074240105,0.0000039463293,0.000027056925,0.0000031754548,0.0000597508,0.0000036868046,0.99714506,0.000016661563,0.00065538485,0.000058836722],"about_ca_topic_score_codex":0.0002695671,"about_ca_topic_score_gemma":0.00010282428,"teacher_disagreement_score":0.009326931,"about_ca_system_score_codex":0.000021898462,"about_ca_system_score_gemma":0.0000043657806,"threshold_uncertainty_score":0.40371642},"labels":[],"label_agreement":null},{"id":"W1976970420","doi":"10.1021/es026043s","title":"Landfarm Performance under Arid Conditions. 1. Conceptual Framework","year":2004,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Biodegradation; Weathering; Environmental science; Arid; Grease; Degradation (telecommunications); Plucking; Environmental engineering; Waste management; Chemistry; Geology; Engineering; Ecology; Biology; Geochemistry","score_opus":0.006234391855577873,"score_gpt":0.21279267051642617,"score_spread":0.2065582786608483,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976970420","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943276,0.000023583094,0.00046831585,0.0015525054,0.00022929987,0.00020399864,0.000020470747,0.00014733167,0.003026911],"genre_scores_gemma":[0.9967899,0.000074675096,0.00190386,0.0009898227,0.000024479976,0.000010533137,0.000010322489,0.000010486491,0.00018595163],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981812,0.000010512299,0.00021899278,0.0005541002,0.0004775544,0.00055759697],"domain_scores_gemma":[0.9993768,0.000012345653,0.00009497109,0.0003642175,0.000002396155,0.00014927104],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000206576,0.000183158,0.00013651766,0.00015536563,0.0004987468,0.00003015827,0.00067984016,0.00019350587,0.005798485],"category_scores_gemma":[0.00002878493,0.00016318691,0.000036077072,0.0009651425,0.0065475176,0.0003809937,0.0004395204,0.00028970046,0.005542577],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000082720135,0.00019488922,0.10313163,9.4734787e-7,0.0000041083927,0.00000706269,0.00026805635,0.0015757774,0.88771015,0.0043772873,0.00015379765,0.0025679932],"study_design_scores_gemma":[0.0009056042,0.0003406618,0.30541208,0.000021550408,0.000012410125,0.00009412818,0.0012937655,0.00006972159,0.66728705,0.008687951,0.01527268,0.00060239516],"about_ca_topic_score_codex":0.000020523048,"about_ca_topic_score_gemma":0.000012269071,"teacher_disagreement_score":0.22042312,"about_ca_system_score_codex":0.0007665053,"about_ca_system_score_gemma":0.000032703872,"threshold_uncertainty_score":0.9961561},"labels":[],"label_agreement":null},{"id":"W1977321319","doi":"10.1007/s10295-004-0139-4","title":"Mineralization of hexachlorocyclohexane in soil during solid-phase bioremediation","year":2004,"lang":"en","type":"article","venue":"Journal of Industrial Microbiology & Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Mineralization (soil science); Microcosm; Bioremediation; Anoxic waters; Environmental chemistry; Amendment; Chemistry; Hexachlorocyclohexane; Bioaugmentation; Biostimulation; Biodegradation; Microbial consortium; Pesticide; Nitrogen; Contamination; Ecology; Microorganism; Geology; Biology; Bacteria","score_opus":0.013919943068624065,"score_gpt":0.258226405586534,"score_spread":0.2443064625179099,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977321319","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970581,0.00004850544,0.00012737812,0.0019579253,0.0005635507,0.00017712059,0.000024710724,0.000016562732,0.000026172203],"genre_scores_gemma":[0.9991899,0.00017991787,0.00038004247,0.0000852866,0.00012089724,7.9217193e-7,0.000019212492,0.000009912616,0.000013999685],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99826634,0.00008737702,0.0010361769,0.00021337262,0.00009635846,0.00030039978],"domain_scores_gemma":[0.9987456,0.000025787009,0.0009702339,0.0001594625,0.00003907802,0.000059842034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044974178,0.00017093672,0.00042531468,0.0004274873,0.000038880124,0.000006188589,0.00034006033,0.00093739736,0.00027749286],"category_scores_gemma":[0.0003062196,0.00014610306,0.0000977325,0.00065201684,0.00040973673,0.00014881417,0.00011629659,0.00049009756,0.000032027678],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031181466,0.0002964408,0.0111494465,0.0000035938126,0.000018531542,0.00002546595,0.000094459305,0.0009391443,0.98554647,0.000026839314,0.0002098222,0.0013779554],"study_design_scores_gemma":[0.0075252843,0.00055663096,0.0016299041,0.0000504557,0.000017807315,0.0002473628,0.00007526798,0.0000051558445,0.9887801,0.00009680231,0.0008745784,0.00014066124],"about_ca_topic_score_codex":0.00014556933,"about_ca_topic_score_gemma":0.0003484487,"teacher_disagreement_score":0.009519543,"about_ca_system_score_codex":0.0003573724,"about_ca_system_score_gemma":0.000080138125,"threshold_uncertainty_score":0.72300667},"labels":[],"label_agreement":null},{"id":"W1977708461","doi":"10.2307/3434723","title":"Chemical Characterization and Bioactivity of Polycyclic Aromatic Hydrocarbons from Non-Oxidative Thermal Treatment of Pyrene-Contaminated Soil at 250-1,000 degrees C","year":2000,"lang":"en","type":"article","venue":"Environmental Health Perspectives","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pyrene; Environmental chemistry; Chemistry; Polycyclic aromatic hydrocarbon; Contamination; Soil contamination; Oxidative phosphorylation; Organic chemistry; Biochemistry; Biology","score_opus":0.006928877597278902,"score_gpt":0.21669959726670585,"score_spread":0.20977071966942695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977708461","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986671,0.00016329021,0.000015158839,0.0001730749,0.00002345977,0.00038500517,0.00030626,0.000015122069,0.00025152636],"genre_scores_gemma":[0.99831194,0.0010137544,0.00016413175,0.000036772683,0.000021734715,0.000008728507,0.00017473992,0.000015229863,0.00025298534],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998686,0.000109627596,0.00033899792,0.00040170396,0.00022009487,0.0002435647],"domain_scores_gemma":[0.9993667,0.0000498023,0.00025298612,0.0001854137,4.2756577e-7,0.00014464537],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00006491062,0.0002187019,0.0003427364,0.00003391572,0.00009948474,0.00000547158,0.00008738361,0.00008776037,0.0018937386],"category_scores_gemma":[0.0000035184205,0.00018926073,0.00006423885,0.000090549984,0.00055540446,0.00015035126,0.000049455957,0.000055651388,0.000063649255],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014025395,0.0008219022,0.06895216,0.0000037102986,0.000031418236,8.705914e-7,0.010527354,0.0000021606907,0.9053531,3.0194786e-7,0.0000025400934,0.014164202],"study_design_scores_gemma":[0.0007202337,0.00031973026,0.6144473,0.000014476579,0.000014261916,0.0000017937817,0.00077581836,0.00030043817,0.3832321,0.0000053525628,0.000046506484,0.00012199032],"about_ca_topic_score_codex":0.0019645914,"about_ca_topic_score_gemma":0.00015797566,"teacher_disagreement_score":0.54549515,"about_ca_system_score_codex":0.0007230589,"about_ca_system_score_gemma":0.000011831171,"threshold_uncertainty_score":0.99901867},"labels":[],"label_agreement":null},{"id":"W1978363261","doi":"10.1021/es801107g","title":"Isotopic Evidence Suggests Different Initial Reaction Mechanisms for Anaerobic Benzene Biodegradation","year":2008,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biodegradation; Chemistry; Sulfate; Benzene; Sulfate-reducing bacteria; Nitrate; Anaerobic exercise; Reaction mechanism; Methanogenesis; Environmental chemistry; Kinetic isotope effect; Isotope fractionation; Fractionation; Methane; Organic chemistry; Catalysis; Biology; Deuterium","score_opus":0.019950663409644822,"score_gpt":0.24347218910064378,"score_spread":0.22352152569099895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978363261","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956982,0.00003185879,0.002107562,0.0009504821,0.0003356272,0.00058707834,0.00001978808,0.00013002705,0.00013936414],"genre_scores_gemma":[0.99659926,0.00019436794,0.002634297,0.00021653129,0.000029389726,0.000044596058,0.000020999652,0.000012219992,0.00024831653],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979646,0.000024027704,0.00029380457,0.0007040706,0.000495051,0.0005184467],"domain_scores_gemma":[0.99930245,0.000031779182,0.00016460643,0.00036595343,0.0000052395803,0.00012995616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026968375,0.00021533296,0.00017587509,0.00024090483,0.0006341159,0.0000217759,0.0005779325,0.000182595,0.00080966286],"category_scores_gemma":[0.00008534606,0.00018872069,0.000059289086,0.0006909402,0.0016082505,0.00059029384,0.00032124246,0.00015200216,0.0004617929],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016429656,0.00010786119,0.009742402,0.0000014997405,0.0000020750606,0.000004017918,0.00006990646,0.000009813368,0.9815684,0.00015631267,0.00015959634,0.008161694],"study_design_scores_gemma":[0.00037291736,0.00036436366,0.123736784,0.000011181687,0.000010193667,0.0000683203,0.00010267712,0.00025687332,0.8718643,0.0007924777,0.0021417972,0.00027808122],"about_ca_topic_score_codex":0.00004242903,"about_ca_topic_score_gemma":0.000058599446,"teacher_disagreement_score":0.11399438,"about_ca_system_score_codex":0.0007598179,"about_ca_system_score_gemma":0.000022280901,"threshold_uncertainty_score":0.886524},"labels":[],"label_agreement":null},{"id":"W1978615222","doi":"10.1111/j.1462-2920.2008.01843.x","title":"New <i>alk</i> genes detected in Antarctic marine sediments","year":2009,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Tellabs (Canada)","funders":"Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"AlkB; Biology; Gene; Phylotype; Rhodococcus; Microbiology; Genetics; Bacteria; 16S ribosomal RNA; Escherichia coli","score_opus":0.0037603985933815733,"score_gpt":0.18023050518866862,"score_spread":0.17647010659528706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978615222","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99733275,0.0000713006,0.000024018284,0.0004947429,0.0001857776,0.0002615738,0.00003274399,0.000036702713,0.0015603658],"genre_scores_gemma":[0.9946249,0.00012977283,0.0020494296,0.0017810115,0.000058490077,0.0000015996803,0.00017330529,0.000012006109,0.0011694666],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986446,0.00007306852,0.00030886751,0.00045543793,0.00007665381,0.00044140933],"domain_scores_gemma":[0.9995507,0.000016372558,0.00008537536,0.00021352505,5.8280426e-7,0.00013342885],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000097907236,0.00023380357,0.00020256781,0.000052000054,0.000053943262,0.000010915406,0.00025105537,0.00015581574,0.015673129],"category_scores_gemma":[0.000005916812,0.00021024059,0.000051187428,0.00016376903,0.00012215292,0.00010830951,0.00021002741,0.00015852957,0.0027835937],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003920704,0.00011357273,0.11760829,6.3224815e-7,0.000004319811,0.000012724021,0.00005627902,0.000015637877,0.8527795,8.8378255e-7,0.0027869688,0.026581965],"study_design_scores_gemma":[0.0014996041,0.00027140402,0.58858234,0.0000051149386,0.000010357174,0.00008985129,0.00002626938,0.000014878485,0.33519164,0.00010041175,0.07381958,0.0003885474],"about_ca_topic_score_codex":0.0002162783,"about_ca_topic_score_gemma":0.00019248572,"teacher_disagreement_score":0.5175879,"about_ca_system_score_codex":0.0003130905,"about_ca_system_score_gemma":0.000009094277,"threshold_uncertainty_score":0.9979929},"labels":[],"label_agreement":null},{"id":"W1978668366","doi":"10.1111/j.1462-2920.2005.00865.x","title":"Distribution and phylogeny of hexachlorocyclohexane‐degrading bacteria in soils from Spain","year":2005,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Hexachlorocyclohexane; Biology; Bacteria; Sphingomonas; Bioremediation; Temperature gradient gel electrophoresis; Pseudomonas; Microbiology; Contamination; Soil microbiology; Microorganism; Soil contamination; Bacilli; Environmental chemistry; 16S ribosomal RNA; Pesticide; Ecology; Chemistry; Genetics","score_opus":0.004509149470612415,"score_gpt":0.17891768261374508,"score_spread":0.17440853314313265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978668366","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988176,0.000109262015,0.000029052388,0.000117483316,0.00006670709,0.00014146062,0.0005940286,0.000009257828,0.00011513776],"genre_scores_gemma":[0.99833894,0.00013527488,0.0006489574,0.0001793756,0.00003331347,0.0000021885196,0.0005884403,0.000007951829,0.00006553473],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990031,0.00008649973,0.00029475844,0.0003287878,0.000043902197,0.00024293675],"domain_scores_gemma":[0.9996614,0.0000373188,0.00010889723,0.0001329106,4.7374897e-7,0.000059019425],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014092757,0.00014988557,0.0001942415,0.000022599193,0.000035317284,0.0000058491983,0.00012229312,0.0001343309,0.0038154153],"category_scores_gemma":[0.0000087435255,0.00014151755,0.000034855977,0.000056098834,0.00032295956,0.000092332084,0.00016724602,0.00009832429,0.00030030153],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002514816,0.00008218436,0.1298437,0.0000012148997,0.000004861343,0.0000013235453,0.00012907121,0.000013171924,0.863462,0.0000025051172,0.00017143654,0.0062634223],"study_design_scores_gemma":[0.000561788,0.000043597876,0.59595424,0.0000066131906,0.0000061116443,0.000011859701,0.000056159675,0.00004744355,0.38877717,0.000016146612,0.01435458,0.00016426409],"about_ca_topic_score_codex":0.00018043749,"about_ca_topic_score_gemma":0.00026013708,"teacher_disagreement_score":0.4746848,"about_ca_system_score_codex":0.00021697574,"about_ca_system_score_gemma":0.0000024795377,"threshold_uncertainty_score":0.9970952},"labels":[],"label_agreement":null},{"id":"W1979549097","doi":"10.1016/s0043-1354(02)00311-1","title":"Anaerobic microbial and photochemical degradation of 4,4′-dibromodiphenyl ether","year":2002,"lang":"en","type":"article","venue":"Water Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":111,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Fisheries and Oceans Canada; University of Victoria","funders":"Fisheries and Oceans Canada","keywords":"Chemistry; Heterolysis; Bond cleavage; Ether; Hydroxylation; Photochemistry; Degradation (telecommunications); Homolysis; Aqueous solution; Solvent; Reductive dechlorination; Organic chemistry; Biodegradation; Radical; Catalysis","score_opus":0.0574132453533463,"score_gpt":0.28800745400987765,"score_spread":0.23059420865653135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979549097","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99656963,0.000015194923,0.0000062939034,0.00045383628,0.000021176535,0.00017723617,0.000006193861,0.00000911159,0.002741295],"genre_scores_gemma":[0.9960959,0.000024583427,0.00065073103,0.00004301138,0.000015719226,0.000002772764,0.000009578051,0.000006674158,0.003151024],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99902374,0.00008887772,0.00013525669,0.00019863859,0.0002892521,0.00026426284],"domain_scores_gemma":[0.99975085,0.0000104170595,0.000015341997,0.00013321509,0.000015795698,0.0000744059],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003904501,0.000062289226,0.00007715969,0.00004243206,0.00006202078,0.000021764907,0.0001322435,0.00006897227,0.01241859],"category_scores_gemma":[0.000020672971,0.000042392054,0.00001968017,0.00013279535,0.0003075665,0.00008090722,0.00017255603,0.00013089129,0.0009792221],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012083833,0.000048604663,0.004061388,0.000006107913,0.0000024853516,0.0000011377468,0.0004120723,6.224451e-7,0.98666036,0.0000053067806,0.00757669,0.0012131499],"study_design_scores_gemma":[0.00025317387,0.00004528954,0.0019936785,0.0000056315453,0.0000014903238,0.0000033362462,0.000020473783,0.00015014634,0.9893132,0.000061301296,0.008085928,0.000066388086],"about_ca_topic_score_codex":0.0002167659,"about_ca_topic_score_gemma":0.00004187022,"teacher_disagreement_score":0.011439367,"about_ca_system_score_codex":0.00004405806,"about_ca_system_score_gemma":0.0000017665427,"threshold_uncertainty_score":0.99979866},"labels":[],"label_agreement":null},{"id":"W1979825982","doi":"10.1016/j.chemosphere.2010.03.001","title":"Scale up of diesel oil biodegradation in a baffled roller bioreactor","year":2010,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biodegradation; Bioreactor; Diesel fuel; Volume (thermodynamics); Pulp and paper industry; Petroleum; Bioremediation; SCALE-UP; Environmental science; Waste management; Chemistry; Contamination; Ecology; Organic chemistry; Engineering; Biology","score_opus":0.005421550276388838,"score_gpt":0.20338613343987724,"score_spread":0.19796458316348842,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979825982","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9895259,0.00000663272,0.0000023388397,0.00031621286,0.00022121021,0.00005485458,0.000011988314,0.000016774573,0.009844084],"genre_scores_gemma":[0.99596626,0.000015831183,0.0009965813,0.0000790175,0.000016889526,0.000002275245,0.00001634303,0.0000065536774,0.0029002465],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993301,0.00001077302,0.00019052697,0.00018150428,0.0001443455,0.00014274546],"domain_scores_gemma":[0.99966556,0.000013902351,0.000079460995,0.00017555423,0.000010259601,0.00005524617],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012268676,0.0000883608,0.00011920168,0.0000075074977,0.000020737456,0.000009475208,0.00014408534,0.00010371598,0.009637309],"category_scores_gemma":[0.000045092922,0.000064452484,0.000032067855,0.00025804972,0.0001183685,0.00010083259,0.000059027676,0.00011280397,0.0004038107],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017508693,0.00006347443,0.11580796,0.000005647623,0.0000014178561,3.2118112e-7,0.00019502302,7.129608e-7,0.84426725,0.0000012563511,0.0021059946,0.037533436],"study_design_scores_gemma":[0.000710537,0.00001308895,0.23970513,0.000008493443,0.0000032746937,8.792483e-7,0.00007195429,0.00017738434,0.7462785,0.000016335076,0.012884266,0.0001301316],"about_ca_topic_score_codex":0.0005254323,"about_ca_topic_score_gemma":0.0038203183,"teacher_disagreement_score":0.123897165,"about_ca_system_score_codex":0.000036935468,"about_ca_system_score_gemma":0.00001223604,"threshold_uncertainty_score":0.99126804},"labels":[],"label_agreement":null},{"id":"W1980289974","doi":"10.1016/j.envpol.2013.11.013","title":"The impact of bioaugmentation on dechlorination kinetics and on microbial dechlorinating communities in subsurface clay till","year":2013,"lang":"en","type":"article","venue":"Environmental Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Novo Nordisk Fonden; Strategiske Forskningsråd","keywords":"Dehalococcoides; Bioaugmentation; Reductive dechlorination; Microcosm; Dehalogenase; Bioremediation; Abundance (ecology); Vinyl chloride; Environmental chemistry; Enrichment culture; Chemistry; Biodegradation; Biology; Gene; Microbiology; Ecology; Bacteria; Contamination; Biochemistry; Genetics; Organic chemistry","score_opus":0.010444586935380945,"score_gpt":0.22865578440070608,"score_spread":0.21821119746532514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980289974","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99880904,0.00001810172,0.000007756459,0.00019379609,0.000066463894,0.00036640844,0.000037384492,0.00000961499,0.0004914174],"genre_scores_gemma":[0.99954337,0.00016201891,0.00007637096,0.00007803512,0.000014287998,0.000007840068,0.000047936428,0.000006745957,0.00006341097],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991117,0.00010113485,0.00025102895,0.00014155674,0.00020216602,0.00019241062],"domain_scores_gemma":[0.9995902,0.00008749244,0.00014473019,0.0001292502,0.0000020897498,0.00004623505],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019783636,0.00013935677,0.00009388222,0.00003823691,0.00013070977,0.00003086128,0.00010705012,0.00006714379,0.0005682054],"category_scores_gemma":[0.000013959951,0.00009308378,0.000039506693,0.00010303438,0.00022074758,0.00016266601,0.00007285742,0.000113853916,0.00015701787],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046995083,0.00017444795,0.054023236,0.0000015792782,0.000005438765,2.0365904e-7,0.00037165525,0.0014622036,0.9212995,0.000012311327,0.00021895421,0.022383438],"study_design_scores_gemma":[0.00041282116,0.00032367275,0.8039807,0.000014429668,0.0000028049649,0.0000014940745,0.0003895275,0.0010493697,0.19353116,0.000062335166,0.00012265335,0.00010906163],"about_ca_topic_score_codex":0.0010212092,"about_ca_topic_score_gemma":0.00029370884,"teacher_disagreement_score":0.74995744,"about_ca_system_score_codex":0.0005385291,"about_ca_system_score_gemma":0.0000024192886,"threshold_uncertainty_score":0.622145},"labels":[],"label_agreement":null},{"id":"W1980446608","doi":"10.1007/s00253-012-3932-4","title":"The EmhABC efflux pump decreases the efficiency of phenanthrene biodegradation by Pseudomonas fluorescens strain LP6a","year":2012,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Phenanthrene; Efflux; Metabolite; Pseudomonas fluorescens; Chemistry; Biodegradation; Strain (injury); Biotransformation; Cometabolism; Biochemistry; Sphingomonas paucimobilis; Pseudomonadales; Pseudomonadaceae; Chromatography; Pseudomonas; Environmental chemistry; Bacteria; Organic chemistry; Biology; Bioremediation; Enzyme","score_opus":0.004893394955850013,"score_gpt":0.19207264930893655,"score_spread":0.18717925435308655,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980446608","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957365,0.00061334897,0.00019024809,0.0024814398,0.00014506788,0.00034599443,0.00016613242,0.000050932034,0.00027036906],"genre_scores_gemma":[0.9986231,0.00067497086,0.00018093658,0.00033295527,0.000022093676,0.000007592687,0.00010123673,0.000007511444,0.000049657097],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988623,0.0000683955,0.00028541705,0.00026838292,0.00005531125,0.00046014646],"domain_scores_gemma":[0.9993174,0.00015378794,0.00017873693,0.00029043865,0.0000070720466,0.00005254156],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047625627,0.0001785875,0.00017573734,0.000030717874,0.00036337742,0.000010654186,0.00038176205,0.00040514336,0.00015797222],"category_scores_gemma":[0.000048945814,0.00009355271,0.000039691335,0.00024344125,0.0023472777,0.000035841826,0.00023513706,0.00020700431,0.00011174303],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028649127,0.00008840973,0.0020788591,0.0000023885602,0.000015210632,8.8367464e-8,0.00010737696,2.1342017e-7,0.9841035,0.0013637815,0.0022633532,0.009948195],"study_design_scores_gemma":[0.00030940233,0.00006165553,0.0016076722,0.0000027643732,0.000023279299,0.000023898212,0.00035373078,0.000003237655,0.97373563,0.00010908935,0.023635296,0.00013434819],"about_ca_topic_score_codex":0.000058223693,"about_ca_topic_score_gemma":0.00008694448,"teacher_disagreement_score":0.021371944,"about_ca_system_score_codex":0.00002969186,"about_ca_system_score_gemma":0.000010324015,"threshold_uncertainty_score":0.8648643},"labels":[],"label_agreement":null},{"id":"W1981200876","doi":"10.1139/w04-008","title":"A survey of indigenous microbial hydrocarbon degradation genes in soils from Antarctica and Brazil","year":2004,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":109,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"AlkB; Pseudomonas putida; Dioxygenase; Biology; Rhodococcus; Soil microbiology; Monooxygenase; Microbiology; Gene; Biochemistry; Chemistry; Bacteria; Genetics; Enzyme; Escherichia coli","score_opus":0.01066066944094524,"score_gpt":0.20509278873261136,"score_spread":0.19443211929166612,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981200876","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99877435,0.00047418408,0.000016440019,0.00022500553,0.00019098396,0.00008081965,0.00020843542,0.0000012013653,0.000028590004],"genre_scores_gemma":[0.9991162,0.000104144594,0.0004298299,0.00026474774,0.000019318748,1.3654048e-7,0.00005141692,0.0000061955157,0.000008027191],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990768,0.00011439285,0.00039552862,0.00014068863,0.000034451754,0.00023814067],"domain_scores_gemma":[0.9994365,0.000040690324,0.00023551827,0.00007753516,0.000025122044,0.00018464819],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035443038,0.00010014136,0.00022774129,0.00013749313,0.000040220373,0.000011513106,0.00017043002,0.00013414775,0.00027887907],"category_scores_gemma":[0.000067297406,0.00009129834,0.000030709292,0.00017603305,0.00026329173,0.00007619769,0.00002107695,0.00013307469,0.000018066321],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022803732,0.000015551854,0.29856586,0.000001657896,0.000009531817,0.000020494519,0.0005482612,0.000049781363,0.69925797,6.6234827e-7,0.000111891655,0.0013955521],"study_design_scores_gemma":[0.001091528,0.00015371239,0.861661,0.00002980545,0.000011504817,0.00016322016,0.000046529505,0.0000021048302,0.13572255,0.00006533009,0.00091002136,0.00014268243],"about_ca_topic_score_codex":0.20385261,"about_ca_topic_score_gemma":0.7354353,"teacher_disagreement_score":0.5635354,"about_ca_system_score_codex":0.00025622992,"about_ca_system_score_gemma":0.00038652387,"threshold_uncertainty_score":0.801449},"labels":[],"label_agreement":null},{"id":"W1981598894","doi":"10.1139/w06-115","title":"Insight into heterogeneity in cell-surface hydrophobicity and ability to degrade hydrocarbons among cells of two hydrocarbon-degrading bacterial populations","year":2007,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Kuwait University","keywords":"Hexadecane; Hydrocarbon; Phenanthrene; Population; Burkholderia; Chemistry; Lysis; Pseudomonas; Biofilm; Polycyclic aromatic hydrocarbon; Bacteria; Biology; Microbiology; Biochemistry; Organic chemistry; Genetics","score_opus":0.011750589694969858,"score_gpt":0.2263763792592778,"score_spread":0.21462578956430794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981598894","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987459,0.00007981491,0.00007694046,0.00011580266,0.0005283591,0.00018496462,0.000031696374,0.0000031786267,0.00023334465],"genre_scores_gemma":[0.99741066,0.0000066559264,0.0023712586,0.00014678642,0.0000363454,2.2725983e-7,0.000007445974,0.0000107554115,0.000009862164],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984177,0.00012556845,0.00070850604,0.00025887665,0.000065859866,0.0004235115],"domain_scores_gemma":[0.9988686,0.000052880256,0.0003017774,0.00016452458,0.000017643977,0.00059460924],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007650772,0.00017757624,0.00034357086,0.00020678132,0.00008713,0.00001594118,0.00025993944,0.00016547042,0.00016841812],"category_scores_gemma":[0.000047586378,0.0001671759,0.00007759497,0.0003548793,0.00037494648,0.00010745587,0.000054964894,0.00023579797,0.000012657387],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000171889,0.00001882081,0.36317855,0.0000032204105,0.0000032748262,0.0000142627505,0.0005949693,0.00017326475,0.63584316,0.0000016628754,0.00008096529,0.000070654365],"study_design_scores_gemma":[0.0006531889,0.00014214427,0.31379145,0.000022600858,0.00001560599,0.00004954885,0.00004995667,0.000030719828,0.6841732,0.000069959126,0.00078993745,0.0002116297],"about_ca_topic_score_codex":0.028774345,"about_ca_topic_score_gemma":0.4748311,"teacher_disagreement_score":0.44605675,"about_ca_system_score_codex":0.00046009017,"about_ca_system_score_gemma":0.0001272581,"threshold_uncertainty_score":0.97769314},"labels":[],"label_agreement":null},{"id":"W1981976044","doi":"10.1897/03-221","title":"Anaerobic transformation of compounds of technical toxaphene. 2. Fate of compounds lacking geminal chlorine atoms","year":2004,"lang":"en","type":"article","venue":"Environmental Toxicology and Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Fisheries and Oceans Canada","funders":"","keywords":"Toxaphene; Biotransformation; Chemistry; Metabolite; Geminal; Environmental chemistry; Stereochemistry; Transformation (genetics); Chlorine; Organic chemistry; Biology; Biochemistry; Pesticide; Ecology","score_opus":0.006807345101237732,"score_gpt":0.20538369812455765,"score_spread":0.1985763530233199,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981976044","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970203,0.00004752164,0.00003831447,0.000065760985,0.000025885944,0.00009137929,0.000049992643,0.000008033831,0.002652829],"genre_scores_gemma":[0.9992594,0.0001408963,0.00045493356,0.0000346013,0.00001006892,0.0000019427441,0.000050668463,0.000005712938,0.00004177945],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999127,0.000012843798,0.00037870766,0.00017494848,0.00016083929,0.00014566559],"domain_scores_gemma":[0.9995997,0.000017980463,0.00019891828,0.00012258292,0.0000018928138,0.000058933263],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011890185,0.0001222842,0.0002231854,0.00001432633,0.000040231804,0.000002124774,0.00013135393,0.00015912543,0.00089943456],"category_scores_gemma":[0.000004198283,0.000118264405,0.000056208486,0.00007176049,0.00079656835,0.00007849234,0.000088480585,0.00010994314,0.0000071426966],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000061223494,0.0002651215,0.022781337,0.000045307883,0.00001142039,0.0000011114557,0.00018376719,0.00006367931,0.9761942,0.000018096554,0.0000238471,0.00035085954],"study_design_scores_gemma":[0.0008080985,0.00011480138,0.07359592,0.000019170791,0.000017941034,0.00002461991,0.00012905666,0.000010000197,0.92484593,0.00007725044,0.0002562061,0.000100990874],"about_ca_topic_score_codex":0.00001576567,"about_ca_topic_score_gemma":0.000011199635,"teacher_disagreement_score":0.051348284,"about_ca_system_score_codex":0.00011596814,"about_ca_system_score_gemma":0.000007618587,"threshold_uncertainty_score":0.9848178},"labels":[],"label_agreement":null},{"id":"W1982512865","doi":"10.1139/s04-038","title":"Long-term tetrachlorethene degradation sustained by endogenous cell decay","year":2005,"lang":"en","type":"article","venue":"Journal of Environmental Engineering and Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Reductive dechlorination; Microcosm; Vinyl chloride; Chemistry; Biodegradation; Chloride; Degradation (telecommunications); Dehalococcoides; Ethanol; Endogeny; Trichloroethylene; Bioremediation; Environmental chemistry; Contamination; Biochemistry; Organic chemistry; Biology; Ecology","score_opus":0.005201067770428681,"score_gpt":0.17557738399761424,"score_spread":0.17037631622718558,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982512865","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99861443,0.00025083756,0.00058021216,0.00008757669,0.00011040262,0.00005320943,0.0000068108457,0.00000748329,0.00028900924],"genre_scores_gemma":[0.9981505,0.0002448997,0.0013260104,0.000050009803,0.000041078012,2.8157334e-7,0.0000015713423,0.0000069043454,0.00017869435],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989529,0.000008672163,0.0002466086,0.00015663428,0.00040270344,0.00023242817],"domain_scores_gemma":[0.9995595,0.000024892404,0.00013033664,0.00008423366,0.000003546528,0.00019747407],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039293713,0.00011139246,0.00010352661,0.00006248227,0.00010038308,0.000045578785,0.00021922216,0.000036246398,0.00043649087],"category_scores_gemma":[0.000019218569,0.00009162033,0.000033690143,0.00013995486,0.000217932,0.000471963,0.000073923686,0.00012019169,0.000033797656],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000064502215,0.0000695197,0.015315696,0.000002618006,0.00000180781,0.0000058751516,0.00012526083,0.0010687675,0.9768383,0.0000013575188,0.00008348819,0.0064808745],"study_design_scores_gemma":[0.0006050267,0.00018052674,0.122756235,0.000010742541,0.000015132657,0.00022394191,0.00007133552,0.0017870037,0.8720356,0.000001200512,0.0020825327,0.00023068847],"about_ca_topic_score_codex":0.000002264746,"about_ca_topic_score_gemma":9.4960825e-7,"teacher_disagreement_score":0.107440546,"about_ca_system_score_codex":0.00026355608,"about_ca_system_score_gemma":0.000010926118,"threshold_uncertainty_score":0.47792688},"labels":[],"label_agreement":null},{"id":"W1982769644","doi":"10.1021/es026045c","title":"Landfarm Performance under Arid Conditions. 2. Evaluation of Parameters","year":2004,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"TILLING; Biodegradation; Nutrient; Water content; Moisture; Volatilisation; Environmental science; Chemistry; Fertilizer; Weathering; Soil water; Environmental engineering; Soil science; Agronomy; Geology; Geotechnical engineering","score_opus":0.012647017945463456,"score_gpt":0.23691921912243288,"score_spread":0.22427220117696942,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982769644","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969769,0.00001653296,0.00006926216,0.0004854678,0.00011134149,0.00025753284,0.000013327071,0.00004038309,0.0020292127],"genre_scores_gemma":[0.99891466,0.000034783967,0.0008397407,0.0001497113,0.000004229901,0.000010678244,0.000009398823,0.0000052530786,0.000031564632],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983836,0.000017136634,0.00021191475,0.0003531224,0.0007389294,0.00029528938],"domain_scores_gemma":[0.999522,0.000006489459,0.00012467583,0.00027284154,0.000005766681,0.00006826349],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00061947276,0.00011308029,0.00010621132,0.00017628519,0.00019213687,0.0000106508805,0.00040105564,0.000092886636,0.0019121728],"category_scores_gemma":[0.00002935605,0.00010046505,0.000028251316,0.00077740685,0.0028058935,0.00028928384,0.00020668308,0.000105986415,0.0007390009],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004300787,0.00013484946,0.055665392,9.458914e-7,0.0000027893489,4.5105364e-7,0.00007590354,0.008912693,0.9287131,0.00014949444,0.00002351711,0.006316562],"study_design_scores_gemma":[0.00065282127,0.00014302474,0.25069848,0.0000072000134,0.000016844799,0.000016314345,0.00023540595,0.0004735895,0.7454172,0.0018730363,0.00031076788,0.00015535469],"about_ca_topic_score_codex":0.000031783136,"about_ca_topic_score_gemma":0.000019042662,"teacher_disagreement_score":0.19503307,"about_ca_system_score_codex":0.0007665223,"about_ca_system_score_gemma":0.000041832893,"threshold_uncertainty_score":0.9999079},"labels":[],"label_agreement":null},{"id":"W1983092611","doi":"10.1139/w03-053","title":"Mechanisms of cadmium resistance in anaerobic bacterial enrichments degrading pentachlorophenol","year":2003,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Pentachlorophenol; Exopolymer; Cadmium; Enrichment culture; Extracellular; Chemistry; Extracellular polymeric substance; Environmental chemistry; Bacteria; Microbiology; Biofilm; Nuclear chemistry; Biology; Biochemistry","score_opus":0.008716412737001671,"score_gpt":0.19478992170851742,"score_spread":0.18607350897151576,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983092611","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997662,0.00011657942,0.000069556074,0.000113569,0.0008029646,0.00009352675,0.00003954959,0.000001358556,0.0011009106],"genre_scores_gemma":[0.99717826,0.000015626352,0.0024070605,0.0001887795,0.000013982845,3.3408128e-7,0.000006629569,0.000007637883,0.00018167694],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988441,0.00015057488,0.00048224605,0.0001438487,0.000049108967,0.0003301492],"domain_scores_gemma":[0.99930006,0.000021468944,0.000316257,0.000104435865,0.000021994552,0.00023576898],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00042403507,0.00011425676,0.0002438178,0.00015625735,0.000045851884,0.00000972566,0.00024529645,0.00011556721,0.0040428755],"category_scores_gemma":[0.00009332342,0.00010417616,0.000059989856,0.00022245817,0.00014253473,0.00008345712,0.000013149478,0.00014501227,0.000049347444],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022554825,0.000016042608,0.01380616,0.0000034143927,0.00000876592,0.00004370365,0.00021755413,0.00000628821,0.9834183,0.0002595797,0.0021413665,0.000056309014],"study_design_scores_gemma":[0.0027085429,0.00034213322,0.046876848,0.00009506054,0.000032664888,0.00038492816,0.00038148582,8.879074e-7,0.8554039,0.001485681,0.09180928,0.0004786169],"about_ca_topic_score_codex":0.0014180813,"about_ca_topic_score_gemma":0.105923906,"teacher_disagreement_score":0.12801439,"about_ca_system_score_codex":0.00039224033,"about_ca_system_score_gemma":0.00024858027,"threshold_uncertainty_score":0.99686754},"labels":[],"label_agreement":null},{"id":"W1983099741","doi":"10.1074/jbc.m406808200","title":"Revisiting the Regiospecificity of Burkholderia xenovorans LB400 Biphenyl Dioxygenase toward 2,2′-Dichlorobiphenyl and 2,3,2′,3′-Tetrachlorobiphenyl","year":2004,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Metabolite; Chemistry; Dioxygenase; Biphenyl; Stereochemistry; Oxygenase; Burkholderia; Biochemistry; Enzyme; Organic chemistry; Bacteria; Biology","score_opus":0.025365157022148872,"score_gpt":0.22659319479466525,"score_spread":0.20122803777251638,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983099741","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99633294,0.0004314242,0.0001935926,0.00168711,0.00010781295,0.00009396694,0.000018520548,0.000012859681,0.0011217716],"genre_scores_gemma":[0.9977365,0.0006125327,0.0009785764,0.00022069883,0.00040053108,5.9867256e-7,0.0000037744628,0.000008235658,0.00003851765],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983981,0.000051805506,0.0007207121,0.00024780605,0.00031011814,0.00027144342],"domain_scores_gemma":[0.99879724,0.000097719436,0.00066357106,0.00020540565,0.000053194573,0.0001828565],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007274569,0.00020512647,0.00036877813,0.00001419488,0.0001050369,0.000033060824,0.00043072278,0.00019869,0.0011827692],"category_scores_gemma":[0.00026665576,0.00011580508,0.0001760535,0.00023836012,0.00059946335,0.000116763564,0.0001614357,0.00037476636,0.000013381881],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008711133,0.00006960637,0.006885533,0.000027365526,0.000021391828,0.000020340283,0.00016582613,0.000062257546,0.9906816,0.00001733892,0.0001798169,0.0017818332],"study_design_scores_gemma":[0.000968254,0.00012506476,0.03972846,0.00009698954,0.00002891799,0.00026784747,0.00043897913,0.000007203106,0.95256984,0.00046510305,0.0050592367,0.00024412529],"about_ca_topic_score_codex":0.000025925734,"about_ca_topic_score_gemma":0.000001669746,"teacher_disagreement_score":0.038111757,"about_ca_system_score_codex":0.000117201125,"about_ca_system_score_gemma":0.000029159559,"threshold_uncertainty_score":0.9997303},"labels":[],"label_agreement":null},{"id":"W1983134234","doi":"10.1016/j.jconhyd.2007.05.008","title":"Quantifying MTBE biodegradation in the Vandenberg Air Force Base ethanol release study using stable carbon isotopes","year":2007,"lang":"en","type":"article","venue":"Journal of Contaminant Hydrology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":49,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biodegradation; Environmental chemistry; Chemistry; Stable isotope ratio; Carbon fibers; Isotope analysis; Ethanol; Environmental science; Base (topology); Organic chemistry; Materials science; Geology; Oceanography","score_opus":0.030026480597694357,"score_gpt":0.2780762528792689,"score_spread":0.24804977228157454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983134234","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980877,0.00006966772,0.00052004703,0.0004959306,0.00024776388,0.00029403146,0.0000013407357,0.000004477747,0.0002790583],"genre_scores_gemma":[0.9991075,0.000024396699,0.00015813079,0.00058362744,0.00005823527,6.1810806e-7,0.0000010526805,0.0000075690623,0.00005887823],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982743,0.0002948305,0.00062281394,0.00016306087,0.00033465357,0.00031030682],"domain_scores_gemma":[0.9991166,0.0001627483,0.00047499055,0.00015293078,0.000026069314,0.00006663635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027920126,0.00013049388,0.0002444969,0.00013327265,0.00008730522,0.000016624143,0.00026983765,0.000096021875,0.00010696132],"category_scores_gemma":[0.00010391078,0.00008489753,0.000058838956,0.0002956083,0.00007906794,0.00020184438,0.000050137893,0.00028050365,0.0000099423205],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034686137,0.00045985667,0.58087,0.0000050530157,0.000018268314,0.0003673476,0.0027302734,0.00091092027,0.41274303,0.000007022063,0.00010783874,0.0014335555],"study_design_scores_gemma":[0.0063463296,0.002697555,0.8515468,0.00007648741,0.00019420561,0.00080719934,0.0071415547,0.011349482,0.11335098,0.00008915212,0.0058246185,0.00057558366],"about_ca_topic_score_codex":0.0011110993,"about_ca_topic_score_gemma":0.005931484,"teacher_disagreement_score":0.29939207,"about_ca_system_score_codex":0.00016282783,"about_ca_system_score_gemma":0.000031997322,"threshold_uncertainty_score":0.34620208},"labels":[],"label_agreement":null},{"id":"W1983695346","doi":"10.1007/s10295-011-1024-6","title":"Microbial processes in the Athabasca Oil Sands and their potential applications in microbial enhanced oil recovery","year":2011,"lang":"en","type":"review","venue":"Journal of Industrial Microbiology & Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Oil sands; Microbial enhanced oil recovery; Petroleum engineering; Environmental science; Hydrocarbon; Crude oil; Microbial consortium; Petroleum; Geology; Microorganism; Bacteria; Asphalt; Chemistry; Paleontology","score_opus":0.025728444722616393,"score_gpt":0.2422729757413924,"score_spread":0.216544531018776,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983695346","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1563727,0.8389097,0.000044852335,0.0010309087,0.001665559,0.000939524,0.00065252156,0.000048553982,0.00033572013],"genre_scores_gemma":[0.00559199,0.9934103,0.00016953652,0.00017068519,0.00037814904,0.000027065173,0.00011527941,0.000038611375,0.00009840567],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99612635,0.00059412164,0.0018741814,0.00067115785,0.00007687744,0.000657323],"domain_scores_gemma":[0.99740946,0.00025941577,0.0017920013,0.0004161179,0.00004466691,0.00007833767],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0011818497,0.0006654763,0.0018415082,0.0007074746,0.00012432649,0.000049541697,0.001565279,0.0032387644,0.0002974732],"category_scores_gemma":[0.0002238553,0.00040939302,0.0003666973,0.0013921676,0.0010424057,0.00015640755,0.00044705108,0.0025185323,0.000070933434],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016531107,0.00038087214,0.000069799724,0.0003637691,0.00009946773,0.000029568231,0.00032353852,8.2366995e-7,0.16006956,0.0000067868546,0.0020203823,0.8364701],"study_design_scores_gemma":[0.0014724155,0.0003458807,0.000009323017,0.001533643,0.00016957431,0.0016569669,0.00019484838,7.334664e-8,0.012084553,0.000026794489,0.9820004,0.0005055074],"about_ca_topic_score_codex":0.00015222991,"about_ca_topic_score_gemma":0.0010777118,"teacher_disagreement_score":0.97998005,"about_ca_system_score_codex":0.00035752423,"about_ca_system_score_gemma":0.0004461999,"threshold_uncertainty_score":0.9998358},"labels":[],"label_agreement":null},{"id":"W1984023263","doi":"10.1016/s0025-326x(03)00215-7","title":"Development of oil hydrocarbon fingerprinting and identification techniques","year":2003,"lang":"en","type":"article","venue":"Marine Pollution Bulletin","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":518,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Environment and Climate Change Canada","funders":"","keywords":"Oil spill; Petroleum; Environmental science; Petroleum product; Identification (biology); Hydrocarbon; Environmental chemistry; Petroleum industry; Contamination; Biochemical engineering; Petroleum engineering; Chemistry; Geology; Environmental engineering; Engineering; Organic chemistry","score_opus":0.006655699275653027,"score_gpt":0.19662893947292148,"score_spread":0.18997324019726847,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984023263","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9700745,0.000007749277,0.0002992294,0.00047198235,0.000042208852,0.000058063633,0.0000011239108,0.00003934625,0.02900585],"genre_scores_gemma":[0.9777207,0.000020749902,0.020715384,0.00009932719,0.000005826467,0.0000033489887,0.000004193013,0.000004586353,0.001425929],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99933666,0.000030804596,0.00024768175,0.0001575066,0.00012356942,0.000103796774],"domain_scores_gemma":[0.9997505,0.0000064328783,0.0001163023,0.00008627406,0.0000063811513,0.000034107587],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00040201005,0.00006872986,0.0000696197,0.000029789933,0.00006681903,0.000011345082,0.000051181727,0.00004039817,0.0020618055],"category_scores_gemma":[0.000070349124,0.000066136,0.000014208839,0.0000955422,0.000057070134,0.000021908998,0.00009163685,0.000040446124,0.00014409226],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005994557,0.00004505596,0.014953336,0.000012942748,0.0000033355655,2.9716432e-7,0.00019024173,0.0000014298798,0.7780344,0.00021756606,0.0005649975,0.20597044],"study_design_scores_gemma":[0.00011400218,0.0000070189826,0.09347037,0.000009009625,0.0000035189362,0.0000036163324,0.000029910438,0.000015107068,0.6374554,0.000044318145,0.26873964,0.000108048414],"about_ca_topic_score_codex":0.000051372277,"about_ca_topic_score_gemma":0.0000355388,"teacher_disagreement_score":0.26817465,"about_ca_system_score_codex":0.00005477584,"about_ca_system_score_gemma":0.0000073764195,"threshold_uncertainty_score":0.99885046},"labels":[],"label_agreement":null},{"id":"W1984241709","doi":"10.1007/s11743-013-1462-4","title":"Comparative Analysis of Rhamnolipids from Novel Environmental Isolates of <i>Pseudomonas aeruginosa</i>","year":2013,"lang":"en","type":"article","venue":"Journal of Surfactants and Detergents","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Armand Frappier Museum; Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Rhamnolipid; Chemistry; Sunflower oil; Sunflower; Food science; Pseudomonas aeruginosa; Chromatography; Strain (injury); Pseudomonadaceae; Microbiology; Environmental chemistry; Bacteria; Horticulture; Biology","score_opus":0.013628303322421362,"score_gpt":0.22075994308573216,"score_spread":0.20713163976331078,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984241709","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99909323,0.00011905384,0.00007382956,0.000028459499,0.00014838597,0.00009715763,0.00023703296,0.00000212824,0.00020074325],"genre_scores_gemma":[0.99835026,0.00029629742,0.0012285805,0.00006159085,0.000015338099,2.8623242e-7,0.000009240818,0.0000050657254,0.000033347635],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99849194,0.00004117694,0.0007738636,0.0001630118,0.00036250032,0.00016752105],"domain_scores_gemma":[0.99878156,0.000071045746,0.00083167,0.00013089103,0.00002526508,0.00015955133],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015486698,0.00015874699,0.0005794331,0.000113744085,0.000035795914,0.00001659044,0.00019366002,0.00007472881,0.0049540233],"category_scores_gemma":[0.000011755527,0.00011761816,0.0001845166,0.00026515836,0.00019054825,0.00032866816,0.00010252592,0.00009728982,0.00003290613],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037964543,0.00015938518,0.3815878,0.000001831791,0.00029202204,5.6188077e-7,0.00040585618,0.00007415581,0.6167986,2.8879896e-7,0.00017698116,0.00046458247],"study_design_scores_gemma":[0.0006323147,0.0001367282,0.82315964,0.00001527846,0.00026447693,0.0000030008189,0.0002446075,0.0009391268,0.17424744,0.000017897855,0.0002172448,0.00012222688],"about_ca_topic_score_codex":0.0003504495,"about_ca_topic_score_gemma":0.000046426107,"teacher_disagreement_score":0.4425511,"about_ca_system_score_codex":0.00004143568,"about_ca_system_score_gemma":0.000008771328,"threshold_uncertainty_score":0.9959556},"labels":[],"label_agreement":null},{"id":"W1984623258","doi":"10.1021/bi9006644","title":"Characterization of an Aldolase−Dehydrogenase Complex That Exhibits Substrate Channeling in the Polychlorinated Biphenyls Degradation Pathway","year":2009,"lang":"en","type":"article","venue":"Biochemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"University of Guelph","keywords":"Aldolase A; Degradation (telecommunications); Substrate (aquarium); Chemistry; Substrate specificity; Dehydrogenase; Characterization (materials science); Biochemistry; Enzyme; Materials science; Biology; Nanotechnology; Computer science","score_opus":0.02363903059497649,"score_gpt":0.22473683315490717,"score_spread":0.20109780255993068,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984623258","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99919677,0.0000065057225,0.000017692868,0.00022402174,0.000031844942,0.00014395114,0.000051946095,0.000019900464,0.0003073406],"genre_scores_gemma":[0.99897355,0.00001222063,0.00007079243,0.0002907813,0.00003162741,0.000001815159,0.00056776096,0.0000046338787,0.000046815494],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991603,0.000039917286,0.00021094095,0.00021507041,0.00020953716,0.00016422699],"domain_scores_gemma":[0.99959207,0.00000822795,0.00014387358,0.00019471793,0.000009084713,0.000052046955],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022392227,0.00011424773,0.000092475144,0.000020106389,0.000052537114,0.00002468892,0.00020657237,0.00008338481,0.0002625822],"category_scores_gemma":[0.000014889158,0.00008945903,0.00002879209,0.00025784358,0.000052730546,0.00014238646,0.000016829326,0.000068032605,0.000021210744],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002095855,0.000120441146,0.0022101563,0.0000050257545,0.0000010904146,0.0000028786399,0.00016423543,0.0000059442905,0.99601203,0.0000023619982,0.000016404674,0.0014384765],"study_design_scores_gemma":[0.00021565743,0.000029064558,0.08702031,0.000011228554,0.0000023879604,0.0000042633824,0.000082799204,0.0005667679,0.91187793,0.00001033137,0.00007814981,0.00010112033],"about_ca_topic_score_codex":0.000036531826,"about_ca_topic_score_gemma":0.00002094859,"teacher_disagreement_score":0.08481015,"about_ca_system_score_codex":0.00004435775,"about_ca_system_score_gemma":0.000011700863,"threshold_uncertainty_score":0.3648033},"labels":[],"label_agreement":null},{"id":"W1984908836","doi":"10.1002/(sici)1097-0290(20000120)67:2<224::aid-bit12>3.0.co;2-n","title":"Dynamic modeling and optimal fed-batch feeding strategies for a two-phase partitioning bioreactor","year":2000,"lang":"en","type":"article","venue":"Biotechnology and Bioengineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Bioreactor; Phenol; Biological system; Substrate (aquarium); Chemistry; Computer science; Chemical engineering; Process engineering; Engineering; Organic chemistry; Biology","score_opus":0.008849721728323665,"score_gpt":0.235151528351506,"score_spread":0.22630180662318233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984908836","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9837989,0.00014294578,0.015093903,0.00052654324,0.00004760722,0.00015098198,0.000021429209,0.00015923199,0.000058424],"genre_scores_gemma":[0.9914247,0.00019593193,0.008274053,0.000036368263,0.000014675347,0.0000074497725,0.000011331136,0.0000099151275,0.00002560877],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99929583,0.0000040538625,0.00014464265,0.00025898253,0.000048196835,0.00024830905],"domain_scores_gemma":[0.99982345,0.000012174054,0.000029944851,0.000076261385,0.0000035111532,0.000054683765],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009561206,0.0001321761,0.00011607768,0.000050515082,0.00013759297,0.00005280348,0.0000702514,0.00017436103,0.00017040195],"category_scores_gemma":[0.000009434946,0.00012116414,0.000021385535,0.00011560016,0.00012471457,0.00016685581,0.000043482716,0.000106326974,0.000011875895],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037858383,0.000024211493,0.00018664147,0.00001550751,0.00001263321,0.0000022256186,0.00010693226,0.004771778,0.9705052,0.00023034285,0.000013965154,0.024092698],"study_design_scores_gemma":[0.0011557108,0.00020292256,0.00027668607,0.000032119508,0.000023294873,0.000036304722,0.00032121182,0.95178246,0.044664755,0.00011317174,0.0010806021,0.00031075635],"about_ca_topic_score_codex":0.000036238976,"about_ca_topic_score_gemma":0.000033663862,"teacher_disagreement_score":0.9470107,"about_ca_system_score_codex":0.000030165174,"about_ca_system_score_gemma":0.0000048853153,"threshold_uncertainty_score":0.49409303},"labels":[],"label_agreement":null},{"id":"W1985219299","doi":"10.1016/j.chemosphere.2009.09.006","title":"Bioremediation of weathered petroleum hydrocarbon soil contamination in the Canadian High Arctic: Laboratory and field studies","year":2009,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":69,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Royal Military College of Canada","funders":"Natural Sciences and Engineering Research Council of Canada; Parks Canada","keywords":"Bioremediation; Environmental chemistry; Environmental remediation; Environmental science; Contamination; Biodegradation; Petroleum; Volatilisation; Soil contamination; Total petroleum hydrocarbon; Arctic; Soil water; Environmental engineering; Chemistry; Ecology; Soil science; Biology","score_opus":0.007448024708349559,"score_gpt":0.21360395799445514,"score_spread":0.20615593328610557,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985219299","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950574,0.00014537317,0.0000010904978,0.0032152224,0.000049781014,0.000103985854,0.0000065443073,0.0000049515556,0.0014156656],"genre_scores_gemma":[0.99853826,0.00009279696,0.000057788508,0.0012158398,0.00001844928,0.0000017491857,0.000008439183,0.000002418491,0.00006428282],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99944884,0.000034238084,0.00013585368,0.00012379177,0.0001384209,0.00011887085],"domain_scores_gemma":[0.99974525,0.000038796927,0.00006391001,0.00009855044,0.000014492659,0.000039018156],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022136021,0.000072045805,0.0000927162,0.000010562709,0.000047994377,0.000012316145,0.00008760659,0.000066047105,0.00022145412],"category_scores_gemma":[0.0000919599,0.000052507687,0.000012156217,0.00016007015,0.000066111264,0.00007201814,0.000010879434,0.0000705,0.000012511618],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006015241,0.00018119176,0.5958924,0.00004938332,0.000025766258,0.000015175837,0.008423904,0.00009771265,0.35553974,0.00030194878,0.009040955,0.030371653],"study_design_scores_gemma":[0.00084075436,0.00019865595,0.821186,0.00003624718,0.000017670287,0.0000017305954,0.0018198767,0.00031663035,0.17201562,0.0006150291,0.0027469038,0.000204904],"about_ca_topic_score_codex":0.019223513,"about_ca_topic_score_gemma":0.31494212,"teacher_disagreement_score":0.2957186,"about_ca_system_score_codex":0.00014171709,"about_ca_system_score_gemma":0.000022195138,"threshold_uncertainty_score":0.98730755},"labels":[],"label_agreement":null},{"id":"W1985782157","doi":"10.1002/jctb.1247","title":"Improved mass transfer and biodegradation rates of naphthalene particles using a novel bead mill bioreactor","year":2005,"lang":"en","type":"article","venue":"Journal of Chemical Technology & Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Environment and Climate Change Canada; University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bioreactor; Naphthalene; Biodegradation; Mass transfer; Volume (thermodynamics); Bead; Chromatography; Chemistry; Inert; Mass transfer coefficient; Chemical engineering; Particle (ecology); Materials science; Organic chemistry; Composite material; Thermodynamics","score_opus":0.01577504251067222,"score_gpt":0.24182681067701486,"score_spread":0.22605176816634265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985782157","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908971,0.00030727134,0.0019695119,0.0065996074,0.000049205977,0.00010705616,0.000018301153,0.00004397051,0.000007983204],"genre_scores_gemma":[0.9656402,0.00020610057,0.03403386,0.000079967,0.000024032302,7.6853814e-7,0.0000014819724,0.000010483229,0.0000031219201],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998746,0.00001351366,0.0006101166,0.00022258988,0.00014095369,0.00026684802],"domain_scores_gemma":[0.9993823,0.000031256342,0.00029893225,0.00017944719,0.000041273794,0.000066781446],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021026481,0.0001659007,0.00034809587,0.00025510957,0.000029532319,0.00000708211,0.00031581562,0.0007534975,0.000118224496],"category_scores_gemma":[0.0001446244,0.00013207189,0.000076964374,0.00052309356,0.0010193007,0.00014875896,0.00009622413,0.00037288386,0.000005604378],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053578726,0.00013637987,0.0037127538,0.000006224641,0.000028396013,0.0000019079287,0.000020326293,0.0000017591875,0.97758335,0.00012458871,0.000022620328,0.018308116],"study_design_scores_gemma":[0.0008281484,0.00016868347,0.0002960985,0.000021371352,0.000037765734,0.00020176805,0.00005418224,0.00056992,0.9959609,0.00032856883,0.0013985416,0.00013406812],"about_ca_topic_score_codex":0.000010193757,"about_ca_topic_score_gemma":0.0000063487114,"teacher_disagreement_score":0.03206435,"about_ca_system_score_codex":0.000097102435,"about_ca_system_score_gemma":0.000019753112,"threshold_uncertainty_score":0.58116627},"labels":[],"label_agreement":null},{"id":"W1985867465","doi":"10.1111/lam.12211","title":"The involvement of rhamnolipids in microbial cell adhesion and biofilm development - an approach for control?","year":2013,"lang":"en","type":"review","venue":"Letters in Applied Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":127,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biofilm; Adhesion; Microbiology; Bacteria; Cell adhesion; Biology; Cell; Chemistry; Biochemistry; Genetics","score_opus":0.019918806410950042,"score_gpt":0.23229603387046596,"score_spread":0.21237722745951593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985867465","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07850556,0.89438325,0.001221479,0.00042613354,0.0011330205,0.022748262,0.0006199889,0.00007452136,0.00088777696],"genre_scores_gemma":[0.0072575654,0.96492606,0.02315532,0.002162253,0.000106666426,0.00083066913,0.0013895481,0.00008320607,0.00008869966],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977218,0.00016810338,0.000922186,0.0006346653,0.00005543181,0.000497829],"domain_scores_gemma":[0.99909675,0.00013826939,0.00043037735,0.0002745174,0.000004643447,0.00005542911],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00062349887,0.00038921123,0.00092118484,0.00012109287,0.000078411664,0.000023094015,0.0004852192,0.00041107342,0.00004892048],"category_scores_gemma":[0.000005960611,0.0002592742,0.00008803505,0.00018464727,0.00039000233,0.000027269576,0.00021372698,0.0002692217,0.000037330803],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041271694,0.00015902621,0.00013114083,0.0010977541,0.000019544026,4.668009e-7,0.00017953308,0.0000059980016,0.81538,0.000011534485,0.0023172698,0.18065646],"study_design_scores_gemma":[0.001582399,0.0000528227,0.000052148745,0.00019331761,0.000042726417,0.0000055659325,0.000045824105,0.00001012946,0.013036199,0.000004396789,0.984493,0.00048142858],"about_ca_topic_score_codex":0.000050564737,"about_ca_topic_score_gemma":0.00013573865,"teacher_disagreement_score":0.98217577,"about_ca_system_score_codex":0.00027201633,"about_ca_system_score_gemma":0.000035633166,"threshold_uncertainty_score":0.99998593},"labels":[],"label_agreement":null},{"id":"W1986971241","doi":"10.1007/s10529-006-9189-1","title":"Ex situ bioremediation of phenol contaminated soil using polymer beads","year":2006,"lang":"en","type":"article","venue":"Biotechnology Letters","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Phenol; Bioremediation; Polymer; Biodegradation; Bioreactor; Chemistry; Microbial consortium; Desorption; Bead; Environmental chemistry; Contamination; Chromatography; Materials science; Organic chemistry; Microorganism; Adsorption; Composite material; Bacteria; Biology","score_opus":0.005822942754900367,"score_gpt":0.18801432957670502,"score_spread":0.18219138682180466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986971241","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99502534,0.000035146266,0.0006902029,0.003465332,0.00016545868,0.00013354892,0.000014752939,0.00010012069,0.0003701068],"genre_scores_gemma":[0.9984283,0.000009680718,0.0006846928,0.00075304846,0.00003339457,9.3782427e-7,0.00002458068,0.000010804264,0.000054557848],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99903464,0.000029157598,0.0002678065,0.00025227902,0.0001623969,0.00025369413],"domain_scores_gemma":[0.9995675,0.000012998556,0.00018230881,0.00020410489,0.0000064116834,0.0000266589],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009715361,0.00013258703,0.00015020225,0.00011126432,0.00005125715,0.000007013641,0.00019522304,0.00027833873,0.00035476085],"category_scores_gemma":[0.000014453443,0.00012421707,0.000045660123,0.00036807288,0.00046808034,0.00008058834,0.000087972876,0.00011160454,0.00017828982],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008115101,0.00004294703,0.01376271,0.000002524547,0.00000604666,0.000003860955,0.00001800524,0.000024804394,0.98197037,0.00005703857,0.0015798701,0.0025237128],"study_design_scores_gemma":[0.0003447016,0.000023084554,0.01907144,0.0000056669696,0.000013644173,0.0000048440875,0.000023062543,0.00024101863,0.97940916,0.000007738235,0.00071215985,0.00014346396],"about_ca_topic_score_codex":0.0011782148,"about_ca_topic_score_gemma":0.00025751156,"teacher_disagreement_score":0.005308728,"about_ca_system_score_codex":0.00016940437,"about_ca_system_score_gemma":0.0000062309286,"threshold_uncertainty_score":0.5065425},"labels":[],"label_agreement":null},{"id":"W1987086744","doi":"10.1016/j.chemosphere.2008.06.006","title":"Remediation of PAH contaminated soils: Application of a solid–liquid two-phase partitioning bioreactor","year":2008,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":81,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Phenanthrene; Fluoranthene; Pyrene; Biodegradation; Chemistry; Bioreactor; Environmental chemistry; Environmental remediation; Isopropyl alcohol; Pellets; Contamination; Organic chemistry; Materials science","score_opus":0.012815416883133306,"score_gpt":0.2558609206626669,"score_spread":0.2430455037795336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987086744","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99736625,0.00002059928,0.0008736922,0.00006810879,0.000047336212,0.00021062979,0.000052708245,0.000029176219,0.0013314832],"genre_scores_gemma":[0.9989888,0.000035576206,0.00066786306,0.000063511565,0.000025529804,0.000007159164,0.00010293803,0.000008558701,0.00010002825],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99907976,0.000024005749,0.00035341852,0.00019230264,0.00020936497,0.00014115416],"domain_scores_gemma":[0.9993689,0.000023877683,0.00031402172,0.0001904578,0.00003847499,0.00006428036],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013242934,0.00009938995,0.00016930191,0.000008724689,0.000048575926,0.0000023398168,0.0001174912,0.000076352524,0.0013715192],"category_scores_gemma":[0.000058043825,0.00009266798,0.000049292543,0.0002478705,0.00020257142,0.00012403072,0.000039564635,0.00005623296,0.0001285662],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007682135,0.00020814089,0.011533455,0.000013367429,0.0000066818493,9.624629e-7,0.00038515206,0.00003856982,0.9834078,0.000009361758,0.0011778617,0.003141813],"study_design_scores_gemma":[0.0011459055,0.0001191022,0.01195224,0.000012460988,0.000010916446,0.0000032665284,0.00008261895,0.0012499641,0.9839029,0.000015046602,0.0013975169,0.000108079585],"about_ca_topic_score_codex":0.0001819361,"about_ca_topic_score_gemma":0.00008949384,"teacher_disagreement_score":0.0030337332,"about_ca_system_score_codex":0.00006729259,"about_ca_system_score_gemma":0.000020380574,"threshold_uncertainty_score":0.99954134},"labels":[],"label_agreement":null},{"id":"W1987238223","doi":"10.1021/es3011964","title":"Biodegradation of RDX Nitroso Products MNX and TNX by Cytochrome P450 XplA","year":2012,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Biotechnology Research Institute","funders":"Strategic Environmental Research and Development Program; U.S. Department of Defense","keywords":"Biodegradation; Chemistry; Nitroso; Rhodococcus rhodochrous; Anaerobic exercise; Cometabolism; Cytochrome; Degradation (telecommunications); Environmental chemistry; Organic chemistry; Bacteria; Rhodococcus; Bioremediation; Biology","score_opus":0.004031669327882553,"score_gpt":0.18888423128470144,"score_spread":0.1848525619568189,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987238223","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979818,0.00017473096,0.000034529112,0.0007009981,0.00007878134,0.00024614876,0.000040635194,0.000046811067,0.000695558],"genre_scores_gemma":[0.9983601,0.00011069903,0.0011892655,0.0000914823,0.000014611247,0.000005782647,0.000014301414,0.0000076060205,0.00020616001],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984774,0.000018876639,0.00022549898,0.00041580055,0.0003858341,0.000476591],"domain_scores_gemma":[0.9994328,0.000009238477,0.00014442216,0.00028145628,0.0000025523834,0.0001295026],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0003935253,0.00015126837,0.00014286417,0.0001421162,0.0001887289,0.000014127044,0.00036525776,0.00012219472,0.00087815063],"category_scores_gemma":[0.000046912854,0.00013138916,0.000017205788,0.0007986687,0.0033018389,0.0005492298,0.00043355237,0.00011723772,0.000388133],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000035835706,0.00011378653,0.13714871,0.0000018410053,0.0000014515512,2.4249468e-7,0.00008737794,6.238636e-7,0.85732555,0.000042092463,0.000443914,0.004830842],"study_design_scores_gemma":[0.00015995823,0.000082440536,0.19833745,0.0000029094556,0.000005494493,0.000018281933,0.00013814497,0.000013229885,0.792312,0.000051718103,0.008732319,0.00014600724],"about_ca_topic_score_codex":0.00003645871,"about_ca_topic_score_gemma":0.0000038952894,"teacher_disagreement_score":0.06501349,"about_ca_system_score_codex":0.00022585281,"about_ca_system_score_gemma":0.0000094466195,"threshold_uncertainty_score":0.9994106},"labels":[],"label_agreement":null},{"id":"W1988420859","doi":"10.1007/s10532-006-9056-8","title":"Enhanced Degradation of a Mixture of Polycyclic Aromatic Hydrocarbons by a Defined Microbial Consortium in a Two-Phase Partitioning Bioreactor","year":2006,"lang":"en","type":"article","venue":"Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":59,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biodegradation; Bioreactor; Degradation (telecommunications); Microbial consortium; Microbial biodegradation; Chemistry; Environmental chemistry; Polycyclic aromatic hydrocarbon; Organic chemistry; Microorganism; Bacteria; Biology; Engineering","score_opus":0.007836708582734365,"score_gpt":0.23493798993867215,"score_spread":0.2271012813559378,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988420859","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99743664,0.00003874786,0.0014579328,0.00014113908,0.00007054287,0.00029507943,0.00007421969,0.000023238159,0.00046242806],"genre_scores_gemma":[0.9977623,0.000009434609,0.0013967826,0.00003859273,0.000013683399,0.000008158803,0.00065813423,0.0000091299935,0.000103774284],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986662,0.00008026992,0.00059941446,0.00024326582,0.00021946554,0.0001913835],"domain_scores_gemma":[0.99931926,0.000046300185,0.00043257553,0.00015696025,0.0000041857124,0.00004073235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018068301,0.00014538958,0.00021122576,0.00010097843,0.00003487991,0.000013507182,0.00010823323,0.00007983451,0.00011486313],"category_scores_gemma":[0.0000603679,0.0001382602,0.00005827763,0.00048632902,0.00013952349,0.00017611017,0.000022404269,0.0000651912,0.000029458584],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058935133,0.00037859715,0.013659896,0.000006695746,0.0000043621067,3.5285808e-7,0.00009545517,0.000005498969,0.9836577,0.000014951501,0.0008894536,0.0012280679],"study_design_scores_gemma":[0.0018490781,0.00006837907,0.018691853,0.000038898546,0.000018713103,0.0000014864773,0.000035254627,0.00056580146,0.9782678,0.0001251042,0.00018493534,0.00015270044],"about_ca_topic_score_codex":0.0027961596,"about_ca_topic_score_gemma":0.0020359838,"teacher_disagreement_score":0.005389937,"about_ca_system_score_codex":0.00010221886,"about_ca_system_score_gemma":0.000023693228,"threshold_uncertainty_score":0.5638088},"labels":[],"label_agreement":null},{"id":"W1988473886","doi":"10.5539/jsd.v2n2p90","title":"The Effect of BACILLUS SUBTILIS SY1 and PSEUDOMONAS FLURESCENS W1 in the Ecological Remediation of the Soil","year":2009,"lang":"en","type":"article","venue":"Journal of Sustainable Development","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Science and Technology Planning Project","keywords":"Environmental remediation; Agriculture; Bacillus subtilis; Ecosystem; Environmental science; Soil quality; Pseudomonas; Environmental protection; Agroforestry; Ecology; Biology; Contamination; Bacteria","score_opus":0.0038099050642183365,"score_gpt":0.1960281004694666,"score_spread":0.19221819540524826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988473886","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99708915,0.0000782406,0.0000035636199,0.0021500404,0.00006278242,0.00026156474,4.7441858e-7,0.0000011821654,0.00035300833],"genre_scores_gemma":[0.99948037,0.00011805483,0.00007984048,0.00013427479,0.000014170679,0.0000011931186,3.6107195e-7,0.0000019209008,0.00016984704],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986203,0.00021764736,0.00045720456,0.00007786004,0.00042857256,0.00019846632],"domain_scores_gemma":[0.99924266,0.00019822789,0.0003749156,0.00010253156,0.000046212706,0.000035444864],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024058837,0.000087058186,0.00015450185,0.00003323609,0.00014145352,0.000020975764,0.000308122,0.00005550842,0.000041257557],"category_scores_gemma":[0.0003808488,0.000035245022,0.0000492151,0.0002703356,0.00014015383,0.00008552859,0.0000773549,0.00015639927,0.0000017761624],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011426522,0.0005976721,0.7234763,0.0001533219,0.000077906865,0.00017957031,0.016784929,0.0009881762,0.18367553,0.0003852611,0.014842259,0.05769644],"study_design_scores_gemma":[0.0005725988,0.00028354634,0.9459502,0.000017152568,0.000009982153,0.00002135293,0.0015678178,0.00001858978,0.04620501,0.00011491164,0.0051843715,0.00005442948],"about_ca_topic_score_codex":0.000014835465,"about_ca_topic_score_gemma":0.000058280064,"teacher_disagreement_score":0.22247395,"about_ca_system_score_codex":0.00021170115,"about_ca_system_score_gemma":0.000073696145,"threshold_uncertainty_score":0.14372504},"labels":[],"label_agreement":null},{"id":"W1988904675","doi":"10.1107/s1744309110043393","title":"Anaerobic crystallization and initial X-ray diffraction data of biphenyl 2,3-dioxygenase from<i>Burkholderia xenovorans</i>LB400: addition of agarose improved the quality of the crystals","year":2010,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; University of British Columbia","funders":"National Center for Research Resources","keywords":"Biphenyl; Dioxygenase; Crystallization; Agarose; Materials science; Diffraction; Chemistry; Crystallography; Chromatography; Organic chemistry; Enzyme; Optics","score_opus":0.027689478829044684,"score_gpt":0.2921002949455059,"score_spread":0.2644108161164612,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988904675","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951242,0.00009666638,0.0013992689,0.0008191994,0.00029335974,0.000633108,0.0014956756,0.00003242444,0.000106082014],"genre_scores_gemma":[0.9958289,0.0007418065,0.0014496604,0.00011221722,0.000045827477,0.000012392236,0.0017846376,0.000015125089,0.000009417009],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9975532,0.0006455629,0.00095484406,0.0004345237,0.00022316887,0.00018868572],"domain_scores_gemma":[0.99657035,0.00042713282,0.0012375584,0.0015157708,0.00017347149,0.00007570077],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006503042,0.00023966694,0.00033783936,0.00010644539,0.0005535989,0.00003606668,0.0009322024,0.00033708222,0.0004634066],"category_scores_gemma":[0.0003947641,0.00016474538,0.000093541625,0.0007965748,0.0022994722,0.00049681304,0.00079942826,0.00038861597,1.2684171e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007867632,0.000069053014,0.017156687,0.000024106072,0.000061280116,2.3495076e-8,0.000311437,0.000016643102,0.98095816,0.00042175315,0.0000771447,0.0008250167],"study_design_scores_gemma":[0.0014351786,0.00017528988,0.9562268,0.000045160206,0.00017379796,0.000010403072,0.0007062531,0.004002334,0.022604534,0.0036569613,0.010531794,0.00043147526],"about_ca_topic_score_codex":0.0014243833,"about_ca_topic_score_gemma":0.0064561907,"teacher_disagreement_score":0.95835364,"about_ca_system_score_codex":0.000019964687,"about_ca_system_score_gemma":0.000040608025,"threshold_uncertainty_score":0.8472501},"labels":[],"label_agreement":null},{"id":"W1989020414","doi":"10.1002/btpr.14","title":"On the use, and reuse, of polymers for the treatment of hydrocarbon contaminated water via a solid–liquid partitioning bioreactor","year":2008,"lang":"en","type":"article","venue":"Biotechnology Progress","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Diesel fuel; Reuse; Contamination; Bioreactor; Environmental remediation; Aqueous solution; Environmental science; Waste management; Human decontamination; Aqueous two-phase system; Pulp and paper industry; Chemistry; Organic chemistry","score_opus":0.02725163816733403,"score_gpt":0.22976292940538035,"score_spread":0.20251129123804631,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989020414","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99591255,0.000105856,0.000029554665,0.003321979,0.000045097288,0.0005239538,0.000023200864,0.000027353204,0.000010474202],"genre_scores_gemma":[0.999425,0.0002905109,0.00011992341,0.000072665345,0.0000053299204,0.000032705713,0.000006852119,0.0000065534646,0.000040484218],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993848,0.000025897702,0.00017103697,0.0001630165,0.000082327024,0.00017290316],"domain_scores_gemma":[0.99949485,0.00009256378,0.000103591236,0.0002804064,0.0000090647,0.00001951206],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007285363,0.00010087258,0.00013071814,0.00003082476,0.00012179598,0.000004486419,0.00017149416,0.00015675879,0.000072015304],"category_scores_gemma":[0.000030394725,0.00004517315,0.00004035842,0.00009641946,0.0011716222,0.000032613487,0.000057875957,0.000043006858,0.000006080136],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022025709,0.00021368968,0.00716597,0.0000037295001,0.00004834753,0.0000020292846,0.00057392294,0.000002227042,0.9878661,0.00011448272,0.00015446925,0.0036348],"study_design_scores_gemma":[0.00040461074,0.0011105991,0.004473255,0.000007725145,0.000019478868,0.000006576375,0.000036562426,0.00019800101,0.9896006,0.000020902111,0.004059355,0.0000623245],"about_ca_topic_score_codex":0.000095273404,"about_ca_topic_score_gemma":0.000040130326,"teacher_disagreement_score":0.0039048856,"about_ca_system_score_codex":0.000032821587,"about_ca_system_score_gemma":0.0000044859535,"threshold_uncertainty_score":0.43168908},"labels":[],"label_agreement":null},{"id":"W1989097861","doi":"10.1128/aem.00172-11","title":"Identification of Nitrogen-Incorporating Bacteria in Petroleum-Contaminated Arctic Soils by Using [ <sup>15</sup> N]DNA-Based Stable Isotope Probing and Pyrosequencing","year":2011,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":127,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University; National Research Council Canada; Biotechnology Research Institute","funders":"Natural Resources Canada","keywords":"Stable-isotope probing; AlkB; Actinobacteria; Bioremediation; Environmental chemistry; Pyrosequencing; Proteobacteria; Soil water; Soil microbiology; Soil contamination; Microorganism; Biology; Chemistry; Bacteria; Contamination; 16S ribosomal RNA; Ecology; DNA; Biochemistry; Gene; DNA repair; Genetics","score_opus":0.008934903968721136,"score_gpt":0.1749514861597026,"score_spread":0.16601658219098148,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989097861","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99928087,0.000055753582,0.00012567415,0.000010007468,0.000021821916,0.00033153314,0.00009962033,0.000013069905,0.00006165255],"genre_scores_gemma":[0.9989015,0.000023245202,0.0007416134,0.00012509346,0.0000057582233,0.000009735506,0.00016011421,0.000017655791,0.000015308873],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99864644,0.00006738005,0.00047826933,0.0004523528,0.000053882213,0.00030168807],"domain_scores_gemma":[0.99949193,0.000022753384,0.0002793272,0.00014322404,0.0000018723349,0.000060898987],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002909751,0.00020669123,0.00025299238,0.00005954902,0.00009984097,0.000016456515,0.000111274894,0.00014329159,0.00038121353],"category_scores_gemma":[0.000005222443,0.00020312161,0.000024566603,0.00009204423,0.00044373138,0.00012419683,0.00013605377,0.000115124145,0.000024576286],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038510072,0.00008553265,0.10085914,0.000020551242,0.000007879186,0.0000014621866,0.00043660743,0.00012595946,0.8980308,0.000004578375,0.000008049942,0.00038091672],"study_design_scores_gemma":[0.00097149424,0.00006997794,0.021951674,0.00002307703,0.000022084401,0.000019539419,0.0006228333,0.002438492,0.9734856,0.00007060144,0.000045970737,0.00027868326],"about_ca_topic_score_codex":0.00032624276,"about_ca_topic_score_gemma":0.00004746433,"teacher_disagreement_score":0.078907475,"about_ca_system_score_codex":0.00019152493,"about_ca_system_score_gemma":0.000009602616,"threshold_uncertainty_score":0.8283059},"labels":[],"label_agreement":null},{"id":"W1989277372","doi":"10.1128/aem.00384-12","title":"Discovery of a <i>trans</i> -Dichloroethene-Respiring Dehalogenimonas Species in the 1,1,2,2-Tetrachloroethane-Dechlorinating WBC-2 Consortium","year":2012,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Dehalococcoides; Enrichment culture; Biology; Reductive dechlorination; 16S ribosomal RNA; Microbiology; Library; Thermus; Vinyl chloride; Phylotype; Ribosomal RNA; Bacteria; Chemistry; Gene; Thermophile; Biochemistry; Genetics; Ecology; Organic chemistry; Biodegradation","score_opus":0.010353829339867887,"score_gpt":0.1931877493712734,"score_spread":0.1828339200314055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989277372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99673027,0.0002361485,0.00004154005,0.000108255175,0.00010349424,0.00028411453,0.000087286,0.0000103957045,0.0023984837],"genre_scores_gemma":[0.99881166,0.00019976159,0.00016659866,0.00060517824,0.00004869712,0.000013022304,0.00005942723,0.00001283788,0.00008282574],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99873006,0.000076961354,0.0003660358,0.0002806293,0.000096407726,0.00044992732],"domain_scores_gemma":[0.9994972,0.00013363523,0.00013123707,0.00018664123,6.816236e-7,0.000050602914],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004561456,0.00020725229,0.00023586386,0.000038043494,0.000086137596,0.000013788758,0.00023416815,0.00012785588,0.0003486218],"category_scores_gemma":[0.0000082696815,0.00015027076,0.000054858818,0.00011098803,0.0007671867,0.00015753582,0.00018251906,0.00018690557,0.000061989864],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028697541,0.00013666188,0.1441444,0.00000731326,0.000007741681,0.0000013099293,0.0013683741,0.0000062151157,0.8533041,0.00011931411,0.00006902798,0.0008068569],"study_design_scores_gemma":[0.0008404923,0.00007169289,0.3235502,0.000009181846,0.000026366599,0.00007614664,0.0025265785,0.000003609563,0.66185284,0.00007703988,0.010641422,0.00032440372],"about_ca_topic_score_codex":0.000069702335,"about_ca_topic_score_gemma":0.000060532537,"teacher_disagreement_score":0.19145124,"about_ca_system_score_codex":0.00006826199,"about_ca_system_score_gemma":0.0000032634898,"threshold_uncertainty_score":0.61278635},"labels":[],"label_agreement":null},{"id":"W1989376264","doi":"10.1007/s00248-008-9417-4","title":"Bacterial Diversity of a Consortium Degrading High-Molecular-Weight Polycyclic Aromatic Hydrocarbons in a Two-Liquid Phase Biosystem","year":2008,"lang":"en","type":"article","venue":"Microbial Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":93,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Armand Frappier Museum; Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds Québécois de la Recherche sur la Nature et les Technologies; Génome Québec","keywords":"Chrysene; Pyrene; Phenanthrene; Temperature gradient gel electrophoresis; Biodegradation; Environmental chemistry; Microbial consortium; Biology; Microorganism; Population; Microbiology; Bacteria; Food science; 16S ribosomal RNA; Chemistry; Ecology; Genetics","score_opus":0.010081494145462824,"score_gpt":0.22109219417221054,"score_spread":0.2110107000267477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989376264","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99832845,0.000007534502,0.000021089008,0.00019500828,0.0005603215,0.00033411453,0.0000313456,0.000030606865,0.00049152935],"genre_scores_gemma":[0.9992905,0.00001107679,0.00028791756,0.00027938842,0.000035827903,0.000003241995,0.000034030345,0.000011910839,0.000046050543],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998393,0.00020471457,0.0004919357,0.00036620555,0.00013057778,0.00041357038],"domain_scores_gemma":[0.9993875,0.00005362886,0.0002390905,0.00020568325,0.0000017635448,0.00011233023],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020196289,0.0001927944,0.00039852972,0.00012383674,0.00015134261,0.0000063144334,0.0003005896,0.00014173998,0.00065710454],"category_scores_gemma":[0.000048318856,0.00019258613,0.00009378931,0.0003255734,0.00040366038,0.00009358865,0.00047030582,0.00013180546,0.00025960116],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024751268,0.00034354682,0.032295223,0.000004524048,0.000017089656,0.000108391694,0.00043918475,0.0000030417214,0.96605474,0.0000049143664,0.00041462824,0.000067177294],"study_design_scores_gemma":[0.0076286667,0.00050537195,0.044397023,0.000025816213,0.000043519765,0.00018418985,0.000040905044,0.000057220812,0.9460783,0.0000549997,0.0005584404,0.0004255755],"about_ca_topic_score_codex":0.001437799,"about_ca_topic_score_gemma":0.003633647,"teacher_disagreement_score":0.019976491,"about_ca_system_score_codex":0.0002548602,"about_ca_system_score_gemma":0.00004589345,"threshold_uncertainty_score":0.78534347},"labels":[],"label_agreement":null},{"id":"W1989967905","doi":"10.1007/s11746-002-0507-5","title":"Enhanced biosurfactant production by <i>Corynebacterium alkanolyticum</i> ATCC 21511 using self‐cycling fermentation","year":2002,"lang":"en","type":"article","venue":"Journal of the American Oil Chemists Society","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Industrial fermentation; Hexadecane; Fermentation; Chemistry; Corynebacterium glutamicum; Food science; Microorganism; Phospholipid; Substrate (aquarium); Bacteria; Residue (chemistry); Biochemistry; Chromatography; Biology; Organic chemistry","score_opus":0.00874147844042103,"score_gpt":0.21352304738551656,"score_spread":0.20478156894509553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989967905","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980759,0.00003941169,0.00003987175,0.0011277866,0.00033116637,0.000052185675,0.0000070522565,0.0000206127,0.00030602404],"genre_scores_gemma":[0.99509597,0.00061678444,0.002422725,0.00092856,0.00015779887,5.6613953e-7,0.0000014574324,0.000017069795,0.0007590574],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99851805,0.000060384064,0.00045338305,0.00022457242,0.00048247064,0.0002611569],"domain_scores_gemma":[0.99839216,0.000019539935,0.0012305334,0.00020605174,0.000045963792,0.00010577541],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031785277,0.00017405444,0.0002344652,0.000008965223,0.00018656788,0.00004518705,0.00030946513,0.000054309756,0.0002931087],"category_scores_gemma":[0.00005818587,0.00012467659,0.0002683295,0.00040227547,0.00028773936,0.00025271572,0.00008975463,0.00025538998,0.000026983646],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014189315,0.00012026248,0.0028086684,0.000010159708,0.000037354315,4.445356e-7,0.0011777658,0.00009058322,0.9842251,2.8833028e-8,0.009764927,0.0017505443],"study_design_scores_gemma":[0.00029995645,0.00004113599,0.0029293739,0.000030249119,0.000055452736,0.00004624652,0.0004464766,0.0004703224,0.9940989,0.0000019374775,0.0013969464,0.00018299292],"about_ca_topic_score_codex":0.00003754383,"about_ca_topic_score_gemma":0.000002054761,"teacher_disagreement_score":0.009873837,"about_ca_system_score_codex":0.0006570124,"about_ca_system_score_gemma":0.000018920045,"threshold_uncertainty_score":0.50841635},"labels":[],"label_agreement":null},{"id":"W1990003259","doi":"10.1128/aem.00947-06","title":"Transcriptomic Assessment of Isozymes in the Biphenyl Pathway of <i>Rhodococcus</i> sp. Strain RHA1","year":2006,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Transcriptome; Gene; Isozyme; Microarray; Gene expression; Biology; DNA microarray; Microarray analysis techniques; Chemistry; Biochemistry; Enzyme","score_opus":0.004100941636286531,"score_gpt":0.18326953276922803,"score_spread":0.1791685911329415,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990003259","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954223,0.00006567942,0.00003760548,0.00010596566,0.000034782253,0.00030315446,0.0003917565,0.0000049611494,0.003633778],"genre_scores_gemma":[0.99897474,0.00007107883,0.00043172648,0.00027891534,0.000011711328,0.000006941499,0.00018358158,0.0000073454903,0.000033963337],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990094,0.00006982603,0.00037290034,0.00025840814,0.000072710376,0.00021679887],"domain_scores_gemma":[0.9996441,0.000044183864,0.00013404815,0.00015472193,5.647193e-7,0.000022399327],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002659182,0.00015241193,0.00022785628,0.000030380887,0.0000359529,0.0000045455977,0.00019381147,0.000104326034,0.0007201253],"category_scores_gemma":[7.996157e-7,0.000108319706,0.000048984115,0.000085027146,0.000574347,0.00003203094,0.00006689912,0.00010547514,0.00001777896],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001156763,0.00020021627,0.055951983,0.0000075796715,0.00000483222,9.1667823e-7,0.00018069586,0.000034295612,0.9419395,0.0003003466,0.00024984957,0.0011182468],"study_design_scores_gemma":[0.0012578499,0.00013074963,0.62004185,0.0000070209967,0.000017025135,0.000017951174,0.00077288755,0.000020834295,0.36765772,0.0003455314,0.009491939,0.00023864166],"about_ca_topic_score_codex":0.00017521545,"about_ca_topic_score_gemma":0.00019211763,"teacher_disagreement_score":0.57428175,"about_ca_system_score_codex":0.000045647022,"about_ca_system_score_gemma":0.000006097819,"threshold_uncertainty_score":0.78848666},"labels":[],"label_agreement":null},{"id":"W1990040476","doi":"10.1002/(sici)1097-0290(20000220)67:4<417::aid-bit5>3.0.co;2-#","title":"Effects of bioaugmentation strategies in UASB reactors with a methanogenic consortium for removal of phenolic compounds","year":2000,"lang":"en","type":"article","venue":"Biotechnology and Bioengineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; Institut National de la Recherche Scientifique","funders":"","keywords":"Bioaugmentation; Microbial consortium; Chemistry; Bioreactor; Food science; Methanogenesis; Pulp and paper industry; Biotechnology; Environmental chemistry; Methane; Biology; Bioremediation; Bacteria; Organic chemistry; Microorganism; Engineering","score_opus":0.0042453388459000535,"score_gpt":0.19693575937499247,"score_spread":0.1926904205290924,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990040476","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990298,0.00014479448,0.00039392526,0.00008064038,0.00002070302,0.0002145657,0.000007136255,0.000025804751,0.00008261585],"genre_scores_gemma":[0.99641913,0.00016048235,0.0033824155,0.000009206812,0.000003018725,0.000004016253,0.000004092809,0.0000046449595,0.000012994898],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99954456,0.00000791571,0.00015247337,0.00013002781,0.000048329835,0.00011666806],"domain_scores_gemma":[0.9998197,0.000030786014,0.000065723805,0.000064393476,0.0000032783546,0.000016142205],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006571919,0.00008030703,0.00013590866,0.00007329501,0.00001263829,0.0000030839335,0.00006243907,0.00016860635,0.000039379647],"category_scores_gemma":[0.000008016605,0.00006491819,0.00001659789,0.00021312719,0.00019753807,0.000057441735,0.000014752489,0.000063701,0.0000014809918],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056353478,0.000031774543,0.001945411,0.00005625834,0.00001326849,0.0000022330833,0.000083672814,0.00007791816,0.9924109,0.000119473116,0.0000033553893,0.005199377],"study_design_scores_gemma":[0.0006112837,0.00018925752,0.019353367,0.000029627054,0.000014859963,0.000014225334,0.00007775546,0.00033678667,0.9789383,0.000029933159,0.00032080855,0.000083819694],"about_ca_topic_score_codex":0.000060455266,"about_ca_topic_score_gemma":0.00005454589,"teacher_disagreement_score":0.017407957,"about_ca_system_score_codex":0.000018938556,"about_ca_system_score_gemma":0.0000061043443,"threshold_uncertainty_score":0.2647287},"labels":[],"label_agreement":null},{"id":"W1990115632","doi":"10.1002/(sici)1097-0290(19960705)51:1<112::aid-bit13>3.0.co;2-s","title":"Biodegradation of phenol using the self-cycling fermentation (SCF) process","year":2000,"lang":"en","type":"article","venue":"Biotechnology and Bioengineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Fermentation; Biodegradation; Pseudomonas putida; Phenol; Chemistry; Substrate (aquarium); Bioreactor; Volume (thermodynamics); Continuous stirred-tank reactor; Chromatography; Microorganism; Pulp and paper industry; Chemical engineering; Biochemistry; Bacteria; Organic chemistry; Biology; Thermodynamics; Ecology","score_opus":0.007585358243666591,"score_gpt":0.217303766167206,"score_spread":0.2097184079235394,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990115632","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988554,0.000048604794,0.00040338005,0.00037325983,0.00003858845,0.00011341153,0.0000033983338,0.0000778125,0.00008611193],"genre_scores_gemma":[0.9979811,0.00014051676,0.0018104194,0.000031751486,0.000010308588,0.0000011740041,0.0000030468336,0.000004339267,0.000017361443],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995519,0.000007828999,0.00013189015,0.00012848388,0.0000672962,0.00011259375],"domain_scores_gemma":[0.999834,0.0000060948164,0.00005632157,0.00008423575,0.000003291581,0.000016060032],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008225808,0.00007347758,0.00006601219,0.000031348824,0.000073821946,0.000007815111,0.00009037988,0.00011704548,0.00028131605],"category_scores_gemma":[0.000006185912,0.000052359974,0.000013715551,0.00022506223,0.00010258791,0.0000753988,0.000023359495,0.00007158761,0.000013465363],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000054976904,0.000017349812,0.0037746185,0.000010230601,0.000008317243,3.1198243e-7,0.00014316643,0.0006695051,0.9764974,0.000029871353,0.0000053629274,0.01883833],"study_design_scores_gemma":[0.000185575,0.000033847722,0.010931152,0.0000139795975,0.000019672914,0.000012932524,0.00013272485,0.021717088,0.9663734,0.000031979984,0.00043263906,0.000115026625],"about_ca_topic_score_codex":0.00002565959,"about_ca_topic_score_gemma":0.0000059677154,"teacher_disagreement_score":0.021047583,"about_ca_system_score_codex":0.000023950082,"about_ca_system_score_gemma":0.0000036594824,"threshold_uncertainty_score":0.30802137},"labels":[],"label_agreement":null},{"id":"W1990241282","doi":"10.1016/j.marpolbul.2014.06.039","title":"Screening of biosurfactant producers from petroleum hydrocarbon contaminated sources in cold marine environments","year":2014,"lang":"en","type":"article","venue":"Marine Pollution Bulletin","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":118,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada; Research and Development Corporation of Newfoundland and Labrador; Canada Foundation for Innovation","keywords":"Halomonas; Petroleum; Diesel fuel; Hydrocarbon; Environmental science; Bioremediation; Contamination; Hexadecane; Rhodococcus; Environmental chemistry; Chemistry; Biology; Halophile; Bacteria; Ecology; Organic chemistry","score_opus":0.0048880937104432455,"score_gpt":0.1733204664573964,"score_spread":0.16843237274695316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990241282","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992379,0.00000783895,0.00014811693,0.0016325968,0.000097090204,0.00023552433,0.00003035989,0.00003293718,0.005436516],"genre_scores_gemma":[0.9967728,0.00002668192,0.0011279116,0.0003669109,0.000034510107,0.0000050929652,0.00008057068,0.00001821341,0.0015673114],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99821717,0.0001569996,0.0004818579,0.0004483998,0.00036571274,0.00032989145],"domain_scores_gemma":[0.9993171,0.00004039624,0.00025889598,0.0002749935,0.000003769985,0.00010484487],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00046617747,0.00021518106,0.00027906956,0.000084168365,0.000056769026,0.000016576905,0.00022878022,0.0001100823,0.00974457],"category_scores_gemma":[0.00008769655,0.00020428165,0.00006011215,0.00019747291,0.00018222006,0.00004852105,0.00045025337,0.00015471307,0.00042393812],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011426147,0.00015560658,0.4903558,0.000005225945,0.000013118858,0.0000029118328,0.00007507312,0.00056302105,0.5017162,0.000016943548,0.0006823103,0.006299572],"study_design_scores_gemma":[0.0014417836,0.00011423577,0.74978065,0.000020001287,0.000015385966,0.0000013696442,0.000040765357,0.001999003,0.1566303,0.000028017748,0.089660265,0.00026821942],"about_ca_topic_score_codex":0.0068816864,"about_ca_topic_score_gemma":0.00077560043,"teacher_disagreement_score":0.34508586,"about_ca_system_score_codex":0.00016204781,"about_ca_system_score_gemma":0.0000057361617,"threshold_uncertainty_score":0.9997316},"labels":[],"label_agreement":null},{"id":"W1990282383","doi":"10.1007/s10532-012-9577-2","title":"Potential applications of bioprocess technology in petroleum industry","year":2012,"lang":"en","type":"review","venue":"Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Biorefining; Bioprocess; Oil refinery; Bioremediation; Petroleum; Petroleum industry; Waste management; Environmental science; Microbial enhanced oil recovery; Environmental remediation; Chemical industry; Biochemical engineering; Engineering; Environmental engineering; Biofuel; Biorefinery; Chemistry; Contamination; Ecology","score_opus":0.021358016562074197,"score_gpt":0.27740645447118123,"score_spread":0.25604843790910703,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990282383","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006473605,0.99711627,0.0002535373,0.000109913366,0.00015053443,0.0008037445,0.00015363064,0.000049486505,0.0007155008],"genre_scores_gemma":[0.010744385,0.98796016,0.00040046507,0.000013053282,0.00006116169,0.00007605806,0.0003810896,0.000017417802,0.00034619204],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99886703,0.00003761151,0.0004722368,0.00026031796,0.0001707164,0.00019209806],"domain_scores_gemma":[0.99928904,0.000008535315,0.00041332684,0.00023448492,0.000008809514,0.000045820583],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016812643,0.00018027873,0.00041303114,0.00026662936,0.000028676113,0.000008590533,0.00029427302,0.0008047236,0.0007796031],"category_scores_gemma":[0.000008611909,0.00015158745,0.000077780714,0.001003377,0.00012635501,0.00010109873,0.000109248045,0.0003255646,0.00050927885],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000011376452,0.000104607796,0.0012790696,0.0006190958,0.0000067020087,3.1288585e-7,0.000006634375,8.6771934e-7,0.00039800163,0.000038865255,0.00012095009,0.99742377],"study_design_scores_gemma":[0.00008730202,0.000010247462,0.00026699735,0.0002700476,0.00008977745,0.0000069691005,0.000011605557,0.000005891447,0.00029021225,0.000030949966,0.9987434,0.00018659802],"about_ca_topic_score_codex":0.000047108413,"about_ca_topic_score_gemma":0.000035196867,"teacher_disagreement_score":0.9986225,"about_ca_system_score_codex":0.0001607682,"about_ca_system_score_gemma":0.00003795383,"threshold_uncertainty_score":0.8536107},"labels":[],"label_agreement":null},{"id":"W1991128697","doi":"10.1107/s1744309110036894","title":"Expression, purification, crystallization and preliminary crystallographic studies of<i>cis</i>-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase from<i>Pandoraea pnomenusa</i>B-356","year":2010,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Indian Institute of Technology Roorkee; Ministry of Education, India; Council of Scientific and Industrial Research, India","keywords":"Biphenyl; Crystallization; Sodium formate; Escherichia coli; Solvent; Chemistry; Dehydrogenase; Crystallography; Polyethylene glycol; Strain (injury); Stereochemistry; Enzyme; Organic chemistry; Biochemistry; Biology","score_opus":0.015084050790862419,"score_gpt":0.2614641367857759,"score_spread":0.24638008599491348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991128697","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940745,0.0011586916,0.0018447366,0.001043114,0.00036988384,0.0007669085,0.0002615599,0.0001857228,0.00029487908],"genre_scores_gemma":[0.987177,0.005877458,0.0053783394,0.00024082435,0.00008727263,0.00006950376,0.0010914024,0.000036867918,0.00004132586],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9970608,0.00044055562,0.0009957959,0.00083624077,0.00027221828,0.00039438493],"domain_scores_gemma":[0.9970917,0.0004234701,0.0007749871,0.0012130847,0.00024175558,0.00025497033],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00048634445,0.00047048557,0.0005176911,0.00033329177,0.0010340799,0.00008613767,0.00068594475,0.000539037,0.0005511189],"category_scores_gemma":[0.00031223043,0.0004215736,0.0001311158,0.0010851633,0.0026747892,0.0006720239,0.00070322433,0.0005488891,0.000001350085],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011256692,0.00008233607,0.051878512,0.000030411524,0.00011034067,4.962819e-7,0.00080627674,0.000021681732,0.94522595,0.00073640456,0.00028473447,0.0007102671],"study_design_scores_gemma":[0.00936423,0.0023633568,0.55016464,0.00041947182,0.0012779534,0.0003662293,0.0065739127,0.008342325,0.09301757,0.07320275,0.2494042,0.0055033793],"about_ca_topic_score_codex":0.00016301403,"about_ca_topic_score_gemma":0.0009167911,"teacher_disagreement_score":0.8522084,"about_ca_system_score_codex":0.000038205435,"about_ca_system_score_gemma":0.000034873116,"threshold_uncertainty_score":0.99982363},"labels":[],"label_agreement":null},{"id":"W1991187282","doi":"10.1016/j.jconhyd.2007.09.006","title":"A strategy for aromatic hydrocarbon bioremediation under anaerobic conditions and the impacts of ethanol: A microcosm study","year":2007,"lang":"en","type":"article","venue":"Journal of Contaminant Hydrology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":69,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"BTEX; Ethylbenzene; Biodegradation; Microcosm; Environmental chemistry; Bioremediation; Chemistry; Xylene; Benzene; Denitrifying bacteria; Sulfate; Denitrification; Toluene; Aromatic hydrocarbon; Gasoline; Hydrocarbon; Organic chemistry; Contamination; Ecology; Nitrogen","score_opus":0.012337377493412375,"score_gpt":0.26784388668006853,"score_spread":0.2555065091866562,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991187282","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979292,0.00009067134,0.0006157271,0.00054256874,0.00014550211,0.00059544214,0.0000063778875,0.0000035152702,0.0000710029],"genre_scores_gemma":[0.9994948,0.000051334948,0.00012998411,0.00025128984,0.00004233174,0.0000025702386,0.000002576595,0.000007024117,0.000018090033],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99868196,0.00013278404,0.00066759426,0.000115337294,0.00018449206,0.00021781478],"domain_scores_gemma":[0.99862385,0.0003867562,0.0007702624,0.00010450507,0.00003074313,0.000083859486],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017772518,0.00011601241,0.0003291866,0.000101406564,0.000070990405,0.000011702617,0.00015257286,0.00009147414,0.000044272718],"category_scores_gemma":[0.00010746391,0.00007087514,0.00008398803,0.00015146533,0.0003354611,0.000110721536,0.0000344798,0.00012812942,0.00000440288],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007999054,0.0003759499,0.039375704,0.000012476944,0.000113340924,0.000013994831,0.0021532353,0.000095858006,0.95577794,0.000120440935,0.000227789,0.0009333341],"study_design_scores_gemma":[0.015160657,0.0046480317,0.9021142,0.000040103743,0.00039629522,0.00032412808,0.002259419,0.0009071471,0.06970095,0.0038754889,0.00031199123,0.00026157725],"about_ca_topic_score_codex":0.00009930363,"about_ca_topic_score_gemma":0.0010406661,"teacher_disagreement_score":0.88607705,"about_ca_system_score_codex":0.000059435406,"about_ca_system_score_gemma":0.000033364842,"threshold_uncertainty_score":0.28902045},"labels":[],"label_agreement":null},{"id":"W1991481634","doi":"10.1007/s10532-005-9029-3","title":"Biostimulation for the Treatment of an oil-contaminated Coastal Salt Marsh","year":2006,"lang":"en","type":"article","venue":"Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":61,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Bedford Institute of Oceanography; Fisheries and Oceans Canada","funders":"U.S. Environmental Protection Agency","keywords":"Biostimulation; Salt marsh; Spartina alterniflora; Environmental science; Environmental chemistry; Nutrient; Contamination; Environmental remediation; Biodegradation; Marsh; Wetland; Chemistry; Bioremediation; Ecology; Biology","score_opus":0.012923849811753447,"score_gpt":0.2315610332412255,"score_spread":0.21863718342947205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991481634","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99762565,0.000019426683,0.001352893,0.00023487418,0.000111948604,0.00023136227,0.00014368589,0.000022418237,0.00025775973],"genre_scores_gemma":[0.9970508,0.000027559568,0.0014970485,0.000026810794,0.000043355245,0.000008077151,0.0006510057,0.000005154392,0.00069017493],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994792,0.000022055567,0.00016250972,0.00013229979,0.000110150206,0.00009382923],"domain_scores_gemma":[0.99970794,0.00004314171,0.00010069449,0.000114695016,0.000014115489,0.000019418598],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008303928,0.00007453672,0.00006387107,0.000017660046,0.00007941431,0.000015182242,0.000059689977,0.000043501197,0.00020956712],"category_scores_gemma":[0.0000071812024,0.000048167716,0.00003606546,0.000108616834,0.00005646147,0.000111635374,0.0000063635034,0.000009895195,0.00003127352],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000113921655,0.00045598508,0.022024069,0.0000047432613,0.0000087491635,2.3763636e-7,0.00015011796,0.00058415707,0.7429942,0.00008082019,0.0008922045,0.2326908],"study_design_scores_gemma":[0.0017010884,0.0006442561,0.4476911,0.00000481108,0.00004996219,0.0000013282588,0.00006947541,0.040351734,0.47286624,0.00009687974,0.036336273,0.00018683492],"about_ca_topic_score_codex":0.0012962904,"about_ca_topic_score_gemma":0.002510382,"teacher_disagreement_score":0.42566705,"about_ca_system_score_codex":0.00007041934,"about_ca_system_score_gemma":0.000005837847,"threshold_uncertainty_score":0.2294613},"labels":[],"label_agreement":null},{"id":"W1991997301","doi":"10.1046/j.1365-2672.2003.01835.x","title":"Initial characterization of new bacteria degrading high-molecular weight polycyclic aromatic hydrocarbons isolated from a 2-year enrichment in a two-liquid-phase culture system","year":2003,"lang":"en","type":"article","venue":"Journal of Applied Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Armand Frappier Museum; Institut National de la Recherche Scientifique","funders":"","keywords":"Pyrene; Chrysene; Vapours; Chemistry; Naphthalene; Phenanthrene; Enrichment culture; Microorganism; Chromatography; Environmental chemistry; Organic chemistry; Microbiology; Bacteria; Biology","score_opus":0.005458398540935209,"score_gpt":0.22490742992084914,"score_spread":0.21944903137991392,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991997301","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981595,0.000022785083,0.00084269606,0.000052041698,0.00032872387,0.0002307965,0.00002820063,0.000010189083,0.00032506333],"genre_scores_gemma":[0.9976612,0.000022722461,0.001979759,0.00016129359,0.000054056556,0.0000015018444,0.00009326194,0.000014005472,0.00001221535],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984884,0.00012836368,0.0008200811,0.00021753454,0.00009509707,0.0002504685],"domain_scores_gemma":[0.9989484,0.000021218862,0.0007691592,0.0001379009,0.0000044873873,0.000118849275],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000230318,0.00019653204,0.00044413336,0.000121232035,0.000031242387,0.000015166559,0.00020311856,0.00016757289,0.00023029791],"category_scores_gemma":[0.000014763147,0.00015999934,0.000081192986,0.0002900014,0.00007099042,0.00008002614,0.000038481143,0.00020661652,0.00005381724],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046974665,0.00015462171,0.0003150477,0.0000050876265,0.00004679968,0.000022491315,0.0006151532,0.000003929275,0.9980894,0.00005922199,0.00007025282,0.00014827205],"study_design_scores_gemma":[0.0044000447,0.0003132338,0.0007639833,0.0000747028,0.000057964447,0.000091124006,0.00013581356,0.000016137867,0.99264437,0.00008124613,0.0012243828,0.00019701521],"about_ca_topic_score_codex":0.00006554431,"about_ca_topic_score_gemma":0.00002368019,"teacher_disagreement_score":0.0054450245,"about_ca_system_score_codex":0.00023240497,"about_ca_system_score_gemma":0.000056030924,"threshold_uncertainty_score":0.6524584},"labels":[],"label_agreement":null},{"id":"W1992652510","doi":"10.1080/09593330.2013.822005","title":"Decontamination of metals, pentachlorophenol, and polychlorined dibenzo-<i>p</i>-dioxins and dibenzofurans polluted soil in alkaline conditions using an amphoteric biosurfactant","year":2013,"lang":"en","type":"article","venue":"Environmental Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hydro-Québec; Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Pentachlorophenol; Chemistry; Leaching (pedology); Soil water; Environmental chemistry; Soil contamination; Human decontamination; Nuclear chemistry; Waste management","score_opus":0.007864963962115775,"score_gpt":0.21126614430064616,"score_spread":0.20340118033853039,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992652510","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988512,0.000105080646,0.00009453152,0.00027101734,0.00005759774,0.00040568956,0.00011850876,0.000042088046,0.0000542783],"genre_scores_gemma":[0.9982339,0.00020841481,0.0013064501,0.000108654545,0.000007486336,0.000011660529,0.0000559646,0.000018616294,0.00004885204],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99869597,0.000049855757,0.00039067457,0.00041566786,0.0001552301,0.0002925831],"domain_scores_gemma":[0.9994813,0.000018541756,0.00016777111,0.00022695318,0.0000024518001,0.00010295726],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010735566,0.00021331522,0.0002670654,0.0001998792,0.00009152129,0.000018269404,0.00015625406,0.00018704915,0.0018103183],"category_scores_gemma":[0.000012098602,0.00020474049,0.000026826463,0.0002832413,0.0006571245,0.0004395013,0.00022007746,0.00013217905,0.000056291494],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009955629,0.00021726161,0.08039836,0.0000042959878,0.000010160318,0.0000027422343,0.00015224516,0.00003445166,0.9173659,0.000022434593,0.000009356489,0.0017728613],"study_design_scores_gemma":[0.001194607,0.00025480438,0.6642998,0.000012790718,0.000028035038,0.00005672244,0.0009330767,0.0022293492,0.3301135,0.00040780078,0.00014907405,0.00032043038],"about_ca_topic_score_codex":0.0007813908,"about_ca_topic_score_gemma":0.00046961993,"teacher_disagreement_score":0.5872524,"about_ca_system_score_codex":0.00015508414,"about_ca_system_score_gemma":0.0000049619557,"threshold_uncertainty_score":0.9991022},"labels":[],"label_agreement":null},{"id":"W1992683368","doi":"10.1080/10889860902902057","title":"An Investigation of the Ability of a<sup>14</sup>C-Labeled Hydrocarbon Mineralization Test to Predict Bioremediation of Soils Contaminated with Petroleum Hydrocarbons","year":2009,"lang":"en","type":"article","venue":"Bioremediation Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Military College of Canada","funders":"Natural Sciences and Engineering Research Council of Canada; Ministère de la Défense Nationale; Parks Canada","keywords":"Microcosm; Bioremediation; Mineralization (soil science); Environmental chemistry; Soil contamination; Hydrocarbon; Environmental remediation; Total petroleum hydrocarbon; Soil water; Contamination; Biodegradation; Chemistry; Petroleum; Environmental science; Amendment; Soil test; Soil science; Ecology","score_opus":0.006037908848114215,"score_gpt":0.20043954273986572,"score_spread":0.1944016338917515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992683368","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99792,0.000010314479,0.000570602,0.0006928142,0.00012483819,0.0005042973,0.000053475942,0.000023824186,0.00009985299],"genre_scores_gemma":[0.99869645,0.000021796133,0.00088978803,0.00019687333,0.00009676294,0.0000035414348,0.000066991466,0.000013989684,0.000013838692],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9971228,0.00026648073,0.0010333998,0.0002971735,0.0010188798,0.00026122073],"domain_scores_gemma":[0.9978943,0.00008549489,0.001241009,0.00036796933,0.00016143823,0.0002497965],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009651559,0.00022868844,0.0003332617,0.00019294044,0.00010595434,0.000024641284,0.0003908319,0.00016440926,0.00010167709],"category_scores_gemma":[0.00043452377,0.00016043863,0.00009255729,0.0010258101,0.00029064788,0.00041748336,0.000033843666,0.0001830706,0.000004756647],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000067920024,0.00015677004,0.3396564,0.000008478821,0.000009245444,2.8213827e-7,0.000992291,0.003595147,0.65481615,0.000007922683,0.00017477854,0.0005146284],"study_design_scores_gemma":[0.0010586294,0.0009521089,0.6321415,0.00006094913,0.000054701657,0.000006004915,0.0001282387,0.014634548,0.35070807,0.00008871819,0.000015485763,0.00015104003],"about_ca_topic_score_codex":0.0000657624,"about_ca_topic_score_gemma":0.00011125748,"teacher_disagreement_score":0.30410805,"about_ca_system_score_codex":0.00020233009,"about_ca_system_score_gemma":0.0001374402,"threshold_uncertainty_score":0.6542497},"labels":[],"label_agreement":null},{"id":"W1993193151","doi":"10.1016/s0045-6535(02)00010-3","title":"A microcosm test for potential mineralization of chlorinated compounds under coupled aerobic/anaerobic conditions","year":2002,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Microcosm; Anaerobic exercise; Mineralization (soil science); Environmental chemistry; Chemistry; Oxygen; Bottle; Pulp and paper industry; Nitrogen; Organic chemistry; Biology; Materials science","score_opus":0.012844656067470804,"score_gpt":0.21482738323635317,"score_spread":0.20198272716888235,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993193151","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956882,0.000031923286,0.0008563533,0.0004654118,0.00014292749,0.00044352227,0.000080987076,0.0000518945,0.0022387856],"genre_scores_gemma":[0.9928107,0.000029608524,0.0018255055,0.00029647973,0.000032358446,0.000011456109,0.00020192262,0.000015566757,0.0047763553],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999164,0.000009668654,0.00026059596,0.00022846535,0.00013488896,0.00020239374],"domain_scores_gemma":[0.9995608,0.000034235465,0.00013968456,0.00015703398,0.00003739235,0.000070903785],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000058024416,0.00013335112,0.00015501691,0.000009097876,0.000098856486,0.00002042617,0.00014212973,0.00009843915,0.011422099],"category_scores_gemma":[0.000023011204,0.00012744554,0.0000757548,0.00025071806,0.00015245072,0.000106953215,0.000041323336,0.000049991042,0.00024819237],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009523744,0.0002123962,0.0028651396,0.000014818544,0.000010311566,5.548362e-7,0.00005067092,0.00035640347,0.9490841,0.00003082322,0.047279432,0.00008584797],"study_design_scores_gemma":[0.005418302,0.00030376448,0.04422965,0.000055514065,0.000116069816,0.00002419823,0.00022789769,0.045117028,0.88015044,0.0003349203,0.023219872,0.00080233783],"about_ca_topic_score_codex":0.00008736637,"about_ca_topic_score_gemma":0.00012171921,"teacher_disagreement_score":0.06893363,"about_ca_system_score_codex":0.0000920751,"about_ca_system_score_gemma":0.000006069299,"threshold_uncertainty_score":0.98948157},"labels":[],"label_agreement":null},{"id":"W1993392711","doi":"10.1016/j.watres.2004.01.035","title":"Mass transfer and bioremediation of naphthalene particles in a roller bioreactor","year":2004,"lang":"en","type":"article","venue":"Water Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Environment and Climate Change Canada; University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bioreactor; Bioremediation; Naphthalene; Aeration; Dissolution; Slurry; Mass transfer; Chemistry; Mass transfer coefficient; Chemical engineering; Chromatography; Environmental engineering; Contamination; Environmental science; Organic chemistry","score_opus":0.04445760191203847,"score_gpt":0.2923690228706033,"score_spread":0.24791142095856483,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993392711","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983063,0.000013320111,0.000013625653,0.0010967206,0.000019083169,0.00019013709,0.0000071645354,0.000006175046,0.00034750704],"genre_scores_gemma":[0.9996806,0.000055123197,0.00016056224,0.000022229611,0.000011236434,0.000005066605,0.0000055312407,0.000005331343,0.00005434987],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99897337,0.000070231465,0.00016518646,0.00017608053,0.0003365845,0.0002785534],"domain_scores_gemma":[0.9998023,0.000009493517,0.0000072953912,0.0000970083,0.000012522477,0.000071366674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006711125,0.00005806823,0.00008219182,0.000087471606,0.00003185044,0.000014979526,0.00009284216,0.00005607311,0.0007277225],"category_scores_gemma":[0.000020990085,0.000037856764,0.000016187549,0.00022088399,0.00021602416,0.00010852354,0.000049660724,0.000097291246,0.00022751237],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036507026,0.000059975813,0.06735311,0.0000069309745,0.0000017436008,0.0000039975816,0.001152785,0.000017680692,0.9305026,0.000017768647,0.000021155663,0.000825744],"study_design_scores_gemma":[0.0006829421,0.00006390357,0.089591816,0.000008914561,8.9769793e-7,8.826751e-7,0.00006904878,0.000025247748,0.9086242,0.00056258106,0.00031466002,0.000054950582],"about_ca_topic_score_codex":0.0005882211,"about_ca_topic_score_gemma":0.0003910176,"teacher_disagreement_score":0.022238707,"about_ca_system_score_codex":0.00007713798,"about_ca_system_score_gemma":0.000008955702,"threshold_uncertainty_score":0.7968051},"labels":[],"label_agreement":null},{"id":"W1993449311","doi":"10.1139/w01-048","title":"Purification, cloning, and sequencing of an enzyme mediating the reductive dechlorination of tetrachloroethylene (PCE) from<i>Clostridium bifermentans</i>DPH-1","year":2001,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Chemistry; Tetrachloroethylene; Corrinoid; Molecular mass; Gel electrophoresis; Biochemistry; Enzyme; DNA; Trichloroethylene; Organic chemistry","score_opus":0.013100287396520994,"score_gpt":0.21257335296870036,"score_spread":0.19947306557217936,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993449311","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99840796,0.00023582,0.000042224336,0.0006965635,0.00026966407,0.00010803689,0.0001099825,0.0000020980879,0.00012766081],"genre_scores_gemma":[0.99864864,0.00012760708,0.0009297836,0.0001481294,0.000084603525,4.7230444e-7,0.000030292893,0.000007049617,0.000023415681],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99892074,0.00014171294,0.00051014335,0.00015205459,0.00007330004,0.00020205657],"domain_scores_gemma":[0.9988976,0.00007623729,0.0006229684,0.00013520088,0.000085096355,0.00018289984],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058438693,0.000104704515,0.00020069694,0.00010173103,0.000099173805,0.000011087276,0.00026707645,0.00010861609,0.00054839946],"category_scores_gemma":[0.0001700961,0.00007971223,0.000041742744,0.00019440403,0.00044351182,0.0001671348,0.000020679172,0.00016542347,0.000004757394],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018024575,0.000011537855,0.035076167,0.0000022137276,0.000016097752,0.0000066400903,0.0012896322,0.000037296835,0.96184355,0.00001055584,0.00023519911,0.001453088],"study_design_scores_gemma":[0.00037075608,0.00016810915,0.03792823,0.0000211453,0.000028829894,0.00021498986,0.0011857537,0.00002319366,0.9573406,0.0001230367,0.002497355,0.000097985365],"about_ca_topic_score_codex":0.007657265,"about_ca_topic_score_gemma":0.0142304115,"teacher_disagreement_score":0.006573146,"about_ca_system_score_codex":0.000252754,"about_ca_system_score_gemma":0.00022636382,"threshold_uncertainty_score":0.99895084},"labels":[],"label_agreement":null},{"id":"W1994535332","doi":"10.1016/j.envpol.2010.01.016","title":"Hydroxypropyl-β-cyclodextrin as non-exhaustive extractant for organochlorine pesticides and polychlorinated biphenyls in muck soil","year":2010,"lang":"en","type":"article","venue":"Environmental Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Scarborough Hospital; University of Toronto; Environment and Climate Change Canada","funders":"Health Canada; University of Toronto","keywords":"Muck; Chemistry; Pesticide; Environmental chemistry; Endrin; Organochlorine pesticide; Environmental science; Ecology; Biology; Soil science","score_opus":0.0037224849985006726,"score_gpt":0.20533246070205202,"score_spread":0.20160997570355135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994535332","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99773175,0.00001851982,0.000070808754,0.0003983162,0.0003161662,0.00062767416,0.00007316763,0.00003274059,0.000730874],"genre_scores_gemma":[0.9981307,0.00007150686,0.0005110899,0.0002242585,0.000082139275,0.000023388036,0.000056638848,0.000024911342,0.0008753837],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985478,0.000015651201,0.0003129823,0.0004889274,0.00023673663,0.00039789625],"domain_scores_gemma":[0.9994888,0.000024953728,0.00012352107,0.00018459164,0.0000019055344,0.00017626799],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00025342865,0.00024352943,0.00018462866,0.00007554842,0.00015364196,0.000029863219,0.00014358133,0.00016531529,0.002341363],"category_scores_gemma":[0.000040529096,0.0002291658,0.00004795132,0.00015941577,0.00034835143,0.00028536742,0.00014643812,0.00022787412,0.0004863347],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011534944,0.00018275337,0.07679513,0.0000046836694,0.0000052384153,0.00000608122,0.00025566877,0.000024839748,0.9187406,0.000021250815,0.00012044579,0.0037279748],"study_design_scores_gemma":[0.001159442,0.00014937912,0.6629118,0.0000079744605,0.000014361046,0.000021967615,0.00010248231,0.00079887675,0.33200338,0.00029253826,0.0022527599,0.00028503995],"about_ca_topic_score_codex":0.00040195056,"about_ca_topic_score_gemma":0.0004428688,"teacher_disagreement_score":0.5867372,"about_ca_system_score_codex":0.00022765208,"about_ca_system_score_gemma":0.000011655442,"threshold_uncertainty_score":0.9985706},"labels":[],"label_agreement":null},{"id":"W1994682835","doi":"10.1016/j.jmb.2010.11.009","title":"Structural Insight into the Expanded PCB-Degrading Abilities of a Biphenyl Dioxygenase Obtained by Directed Evolution","year":2010,"lang":"en","type":"article","venue":"Journal of Molecular Biology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Institut National de la Recherche Scientifique","funders":"National Center for Research Resources; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"Biphenyl; Dioxygenase; Chemistry; Directed evolution; Stereochemistry; Computational biology; Biology; Biochemistry; Enzyme; Organic chemistry; Gene","score_opus":0.004168491159819803,"score_gpt":0.22179899269849448,"score_spread":0.2176305015386747,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994682835","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99842834,0.00018870262,0.00032807552,0.00046064612,0.000332027,0.0000829834,0.000007247738,0.000007642003,0.00016433121],"genre_scores_gemma":[0.99876845,0.000020663974,0.0010106723,0.00012389245,0.0000385267,5.943193e-7,0.000005486424,0.000005462449,0.000026278503],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99907476,0.00015884661,0.00036111867,0.00011353597,0.000144142,0.00014760559],"domain_scores_gemma":[0.99936086,0.000052875515,0.00033796093,0.00013690206,0.00004450132,0.00006688765],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003118266,0.000101807535,0.00017517018,0.00004471227,0.00006570358,0.000009615572,0.00025186792,0.000111217356,0.00039959906],"category_scores_gemma":[0.00026279344,0.000058766505,0.00009755751,0.00016459792,0.00034986905,0.00006578956,0.00006356281,0.00021633349,0.0000059161757],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044919976,0.000018376812,0.012436621,0.000002236951,0.000019085246,0.000002147065,0.0005490154,0.0000062677937,0.98499775,0.00010070227,0.00026949946,0.0015533972],"study_design_scores_gemma":[0.0006893855,0.00026735666,0.037052087,0.000007763647,0.000022601454,0.000057372017,0.00017850414,0.00018122706,0.95615196,0.0017971047,0.0034483415,0.00014631421],"about_ca_topic_score_codex":0.00015719314,"about_ca_topic_score_gemma":0.00011825196,"teacher_disagreement_score":0.02884579,"about_ca_system_score_codex":0.00006310248,"about_ca_system_score_gemma":0.000026032394,"threshold_uncertainty_score":0.43753293},"labels":[],"label_agreement":null},{"id":"W1994834317","doi":"10.1016/j.jbiotec.2014.05.028","title":"Distinctive protein expression patterns of the strain Brevundimonas sp. ZF12 isolated from the aqueous zone containing high levels of radiation to cadmium-induced stress","year":2014,"lang":"en","type":"article","venue":"Journal of Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Cadmium; Strain (injury); Chemistry; Biochemistry; Metabolism; Heat shock protein; Oxidative stress; Biophysics; Homeostasis; Cell biology; Biology; Gene","score_opus":0.00981332993350773,"score_gpt":0.21331467926664724,"score_spread":0.20350134933313951,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994834317","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922279,0.0000138583655,0.0037082976,0.003359366,0.0001714899,0.00028261956,0.00021759151,0.000008510239,0.000010337079],"genre_scores_gemma":[0.9995176,0.0000061963133,0.00027990784,0.00012429505,0.000046022273,0.000001168043,0.0000031170616,0.000007548973,0.000014145561],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99875,0.0001816851,0.00050579524,0.00014557739,0.00026174175,0.00015521601],"domain_scores_gemma":[0.9986468,0.000094822404,0.0009369904,0.0002454542,0.000028090764,0.000047855254],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036411887,0.00011430409,0.0002444118,0.00004817657,0.00006655142,0.00000889286,0.0004914184,0.00023751904,0.00025862677],"category_scores_gemma":[0.00026223256,0.00006430687,0.000069104964,0.00020020256,0.00011805294,0.000067413726,0.00017322385,0.00030954304,0.000005981959],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008623912,0.000051722633,0.013021829,0.0000032102482,0.000016445036,0.0000015460204,0.0004018528,0.000047862737,0.9548183,0.000022685697,0.000037684742,0.031490594],"study_design_scores_gemma":[0.00039665189,0.00033840336,0.23354985,0.000093711074,0.0000122821475,0.0000053724116,0.00023946949,0.000052158084,0.765009,0.000088373614,0.00015445561,0.000060291295],"about_ca_topic_score_codex":0.0006920055,"about_ca_topic_score_gemma":0.00059708965,"teacher_disagreement_score":0.22052802,"about_ca_system_score_codex":0.00009275319,"about_ca_system_score_gemma":0.000023259323,"threshold_uncertainty_score":0.28317818},"labels":[],"label_agreement":null},{"id":"W1994985755","doi":"10.1002/bit.20295","title":"Stimulating in‐soil rhamnolipid production in a bioslurry reactor by limiting nitrogen","year":2004,"lang":"en","type":"article","venue":"Biotechnology and Bioengineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Rhamnolipid; Chemistry; Biodegradation; Environmental chemistry; Nitrogen; Soil contamination; Hydrocarbon; Microorganism; Contamination; Nutrient; Critical micelle concentration; Bioremediation; Petroleum; Soil water; Micelle; Pseudomonas aeruginosa; Bacteria; Environmental science; Aqueous solution; Biology; Organic chemistry; Ecology; Soil science","score_opus":0.006252196237020437,"score_gpt":0.18830089499256558,"score_spread":0.18204869875554514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994985755","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99792325,0.000120768964,0.00006475309,0.0014991595,0.00009811959,0.00012956935,0.0000038001479,0.00010524837,0.00005531423],"genre_scores_gemma":[0.9987724,0.000112526526,0.0010264299,0.00004581565,0.000020313539,0.0000033615647,0.0000051532325,0.000008150482,0.000005851233],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992021,0.000007878166,0.00019410271,0.00027933216,0.00006316847,0.00025341805],"domain_scores_gemma":[0.9998072,0.000008315391,0.00005175388,0.00009841232,0.0000020778411,0.000032269763],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014656967,0.00011688814,0.000111897185,0.000119373435,0.000030853338,0.000009504075,0.000080899765,0.00024194797,0.000022056149],"category_scores_gemma":[0.00009140714,0.00011263278,0.000013563438,0.00041034436,0.00009038599,0.00010549311,0.00008511599,0.00021041727,0.000020784793],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000056675012,0.000030515055,0.051893312,0.000007309971,0.0000021950334,0.0000054285138,0.0000676455,0.0008098584,0.94272107,0.00001898917,0.000010034675,0.0044279858],"study_design_scores_gemma":[0.00050787296,0.00005297946,0.019597426,0.00005839195,0.0000029726875,0.000024163284,0.000095076095,0.00077508943,0.97814965,0.00008137539,0.00043330743,0.00022171669],"about_ca_topic_score_codex":0.00017624398,"about_ca_topic_score_gemma":0.00025710402,"teacher_disagreement_score":0.03542857,"about_ca_system_score_codex":0.000132558,"about_ca_system_score_gemma":0.000005453626,"threshold_uncertainty_score":0.4593031},"labels":[],"label_agreement":null},{"id":"W1995069779","doi":"10.1080/15320383.2011.609201","title":"Effects of Zeolite-Containing Material and Ammonium Nitrate on Biodegradation of<i>n</i>-Tridecane in Heavy Clay-Loam Leached Chernozem with High Organic Matter Content","year":2011,"lang":"en","type":"article","venue":"Soil and Sediment Contamination An International Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ulster University; Russian Foundation for Basic Research; International Science and Technology Center; University of Saskatchewan","keywords":"Loam; Organic matter; Biodegradation; Environmental chemistry; Chemistry; Nitrate; Chernozem; Soil water; Ammonium; Total organic carbon; Soil science; Environmental science; Organic chemistry","score_opus":0.012896901064354763,"score_gpt":0.2021614515164267,"score_spread":0.18926455045207194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995069779","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989685,0.000009149764,0.000092243594,0.00021470469,0.00027468705,0.00015203007,0.000015832542,0.000005696744,0.00026714758],"genre_scores_gemma":[0.9992685,0.000072493676,0.00021135186,0.00028950453,0.00004055727,0.000002925447,0.000028902505,0.000008151819,0.00007764307],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989039,0.0000928127,0.00036838825,0.00017724046,0.00033465595,0.00012301354],"domain_scores_gemma":[0.9994451,0.000030955372,0.0003154025,0.00005482387,0.000071243165,0.00008251865],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030833614,0.00012657684,0.00016644843,0.00012592912,0.00003722986,0.000038696202,0.00011660224,0.000059779264,0.0005888007],"category_scores_gemma":[0.000016908154,0.000098224824,0.000020867936,0.00006941694,0.00010632563,0.00034226768,0.00003701062,0.00010773217,0.000007872589],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017426657,0.00032840844,0.3906379,0.000016998645,0.000052559135,0.000017302715,0.001975639,0.000004909895,0.6002413,0.00017555557,0.000022479795,0.0047842897],"study_design_scores_gemma":[0.0016376536,0.00042857634,0.55435085,0.000055099237,0.000012129898,0.000019282626,0.00017355483,0.000060452952,0.44312227,0.00004840941,0.000011581859,0.00008013942],"about_ca_topic_score_codex":0.00064233044,"about_ca_topic_score_gemma":0.00030646138,"teacher_disagreement_score":0.16371296,"about_ca_system_score_codex":0.00009518861,"about_ca_system_score_gemma":0.000018101722,"threshold_uncertainty_score":0.64469546},"labels":[],"label_agreement":null},{"id":"W1995400078","doi":"10.1128/aem.68.2.485-495.2002","title":"Molecular Analysis of <i>Dehalococcoides</i> 16S Ribosomal DNA from Chloroethene-Contaminated Sites throughout North America and Europe","year":2002,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":450,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Toronto; McMaster University","keywords":"Dehalococcoides; 16S ribosomal RNA; Biology; Phylotype; Reductive dechlorination; Bioremediation; Phylogenetic tree; Environmental DNA; Ribosomal DNA; Ribosomal RNA; Genetics; Microbiology; Gene; Bacteria; Contamination; Ecology; Chemistry; Biodiversity","score_opus":0.004996966476312783,"score_gpt":0.16726385658253806,"score_spread":0.16226689010622528,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995400078","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977905,0.00024856554,0.000032893287,0.000064504966,0.000022435803,0.00017472262,0.0007229169,0.000019320347,0.0009240984],"genre_scores_gemma":[0.9971512,0.0007507591,0.00024360076,0.0008129572,0.000009004035,0.0000040651958,0.0009601823,0.000014617239,0.000053599342],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987962,0.000050428902,0.0002963667,0.00052001333,0.000066925975,0.00027002837],"domain_scores_gemma":[0.9994945,0.0000445095,0.00015809701,0.00020443293,0.0000013765729,0.000097098404],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000036044523,0.00023454808,0.00037942038,0.0000534315,0.00007921592,0.0000122087395,0.00014651094,0.00011208019,0.0033301588],"category_scores_gemma":[0.0000034973332,0.00020672409,0.000062076906,0.0002459296,0.00080361293,0.00005081059,0.0002647165,0.00010096847,0.00029044042],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016346778,0.000099506186,0.107574455,0.0000018689856,0.00015807665,0.000004524579,0.00036830513,0.000041046427,0.8887322,0.0000037288908,0.00014489683,0.0028550385],"study_design_scores_gemma":[0.0012114663,0.00016888225,0.49449557,0.0000031197444,0.0006628249,0.000010914929,0.000297777,0.0005788211,0.4873945,0.000017775377,0.01454394,0.00061438465],"about_ca_topic_score_codex":0.00015955271,"about_ca_topic_score_gemma":0.00010585799,"teacher_disagreement_score":0.40133768,"about_ca_system_score_codex":0.000034195407,"about_ca_system_score_gemma":0.0000010347682,"threshold_uncertainty_score":0.99758095},"labels":[],"label_agreement":null},{"id":"W1995655405","doi":"10.1080/09593330409355469","title":"Biodegradation of c5+ hydrocarbons by a mixed bacterial consortium from a c5+‐contaminated site","year":2004,"lang":"en","type":"article","venue":"Environmental Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Naphthalene; Toluene; Styrene; Benzene; Biodegradation; Microbial consortium; Chemistry; Xylene; Degradation (telecommunications); Bioremediation; Microbial biodegradation; Organic chemistry; Contamination; Environmental chemistry; Waste management; Microorganism; Bacteria; Biology","score_opus":0.0029000187632640968,"score_gpt":0.16702295975183057,"score_spread":0.16412294098856647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995655405","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99776095,0.000055105687,0.00014959824,0.00070956163,0.00017227491,0.00025167494,0.00052969216,0.000095971816,0.00027519494],"genre_scores_gemma":[0.9981394,0.0000680484,0.00095008506,0.00009389769,0.00001340751,0.000008700271,0.00058880635,0.000016499509,0.00012119862],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987129,0.000032564145,0.00035681875,0.00041874935,0.00020431698,0.00027467453],"domain_scores_gemma":[0.99940157,0.000015231891,0.00020973624,0.00030014833,9.381087e-7,0.00007236642],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00006863268,0.00019960542,0.0002269989,0.000073527466,0.00006392787,0.000008694158,0.00025171856,0.00029760035,0.003080915],"category_scores_gemma":[0.000017855033,0.00019579369,0.00005611061,0.00021315124,0.00066247897,0.00011888028,0.00021473509,0.00014796901,0.0010353557],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030689876,0.00022468535,0.03393691,8.3411965e-7,0.000015621756,0.0000043585255,0.0000774279,0.0000031745567,0.9627144,0.000018505218,0.00048517276,0.0024882392],"study_design_scores_gemma":[0.0013839107,0.0001551997,0.03301219,0.000007741022,0.000022599275,0.0000061786936,0.000111590125,0.000017385059,0.95717555,0.0003414329,0.0075417077,0.00022452582],"about_ca_topic_score_codex":0.00044151652,"about_ca_topic_score_gemma":0.00019649311,"teacher_disagreement_score":0.007056535,"about_ca_system_score_codex":0.0002834225,"about_ca_system_score_gemma":0.000007757584,"threshold_uncertainty_score":0.99974245},"labels":[],"label_agreement":null},{"id":"W1995851947","doi":"10.1074/jbc.m111.255174","title":"Retuning Rieske-type Oxygenases to Expand Substrate Range","year":2011,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Oxygenase; Substrate (aquarium); Range (aeronautics); Substrate specificity; Chemistry; Biology; Biochemistry; Engineering; Enzyme; Ecology; Aerospace engineering","score_opus":0.05710421410717246,"score_gpt":0.23895818128373758,"score_spread":0.18185396717656513,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995851947","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99270153,0.0000437847,0.0000127138455,0.00008308999,0.00008976428,0.000031900654,0.00000424784,0.000009071441,0.0070239236],"genre_scores_gemma":[0.99829113,0.00006626117,0.0010375457,0.00028332963,0.0000832221,2.1189686e-7,0.0000015858785,0.0000031708523,0.00023353036],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99929476,0.000020519088,0.00027247815,0.000119594275,0.00013088711,0.00016177348],"domain_scores_gemma":[0.9995167,0.00002001424,0.0001671941,0.00008162827,0.000024579744,0.00018985057],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00023922464,0.00009201947,0.00014319246,0.000006264882,0.000037921585,0.000011880641,0.00022172589,0.000105724685,0.009411758],"category_scores_gemma":[0.00015784535,0.000058177535,0.00006123848,0.00012957987,0.00009406001,0.000059642032,0.000069434565,0.00013498143,0.00015370002],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012650284,0.000045720062,0.07099874,0.000002334694,0.0000052998116,0.00002873762,0.00011632781,0.000001156146,0.9263216,4.7086348e-7,0.0019514174,0.0004016928],"study_design_scores_gemma":[0.00019968601,0.00015858599,0.126936,0.000012265908,0.000005095026,0.000051161536,0.000109607005,0.000001014005,0.8676482,0.000050749928,0.0047159223,0.0001117472],"about_ca_topic_score_codex":0.000007165086,"about_ca_topic_score_gemma":0.0000018640973,"teacher_disagreement_score":0.058673445,"about_ca_system_score_codex":0.000043239786,"about_ca_system_score_gemma":0.000010165889,"threshold_uncertainty_score":0.99149376},"labels":[],"label_agreement":null},{"id":"W1995948261","doi":"10.1007/s002530100614","title":"Introduction of green fluorescent protein gene into phenol-degrading Alcaligenes faecalis cells and their monitoring in phenol-contaminated soil","year":2001,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Alcaligenes faecalis; Green fluorescent protein; Phenol; Molecular biology; 16S ribosomal RNA; Microbiology; Fluorescence microscope; Biology; Chemistry; Microcosm; Gene; Bacteria; Fluorescence; Biochemistry; Environmental chemistry; Organic chemistry","score_opus":0.005170187068691444,"score_gpt":0.17928914131111087,"score_spread":0.17411895424241944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995948261","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978559,0.0002138747,0.00010421579,0.0012710077,0.000094703275,0.00036345693,0.00001553533,0.00005207167,0.000029251089],"genre_scores_gemma":[0.9982512,0.0005856254,0.0009582002,0.000050552066,0.00005557182,0.000011298743,0.000027937835,0.000010304718,0.000049282713],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987877,0.000044410208,0.00032303386,0.00049843715,0.00002913835,0.00031727887],"domain_scores_gemma":[0.9996175,0.000016444981,0.00013456312,0.0001822098,0.000008234072,0.000041053092],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002112234,0.000208675,0.00029093598,0.00013255748,0.00008780058,0.0000068245,0.00016420112,0.00053852645,0.00007780851],"category_scores_gemma":[0.00000958047,0.00016765353,0.000022188791,0.0003149426,0.00060282106,0.000042282478,0.00023668277,0.00021792231,0.000023194129],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007342898,0.00006202263,0.0051549296,0.000012935215,0.000014836586,0.0000025051504,0.0003440491,0.0000033691704,0.95234686,0.00007747712,0.00004666228,0.041860927],"study_design_scores_gemma":[0.0005153059,0.00007984374,0.0019392313,0.00000847742,0.0000069424236,0.000031346564,0.00035379163,0.000016016264,0.99346364,0.00020188825,0.0032048007,0.00017872552],"about_ca_topic_score_codex":0.0006253475,"about_ca_topic_score_gemma":0.0005306113,"teacher_disagreement_score":0.041682202,"about_ca_system_score_codex":0.00007138041,"about_ca_system_score_gemma":0.00000619437,"threshold_uncertainty_score":0.6836713},"labels":[],"label_agreement":null},{"id":"W1995958439","doi":"10.2202/1542-6580.1028","title":"Transport and Reaction Processes in Bioremediation of Organic Contaminants. 2. Role of Aggregate Size in Soil Remediation in a Slurry Bioreactor","year":2003,"lang":"en","type":"article","venue":"International Journal of Chemical Reactor Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Phenanthrene; Bioremediation; Fluoranthene; Acenaphthene; Chemistry; Environmental remediation; Environmental chemistry; Soil water; Soil contamination; Sonication; Slurry; Contamination; Environmental engineering; Soil science; Environmental science; Chromatography","score_opus":0.0038061707029464855,"score_gpt":0.19205124392171735,"score_spread":0.18824507321877088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995958439","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999606,0.000079040605,0.000013483124,0.000044746397,0.00012794785,0.00007107341,0.0000061587707,0.0000029820471,0.00004856446],"genre_scores_gemma":[0.9994186,0.0002922831,0.00024313817,0.0000072945786,0.00002334218,0.0000010460691,0.000005381307,0.000008054486,8.363902e-7],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987722,0.000015929283,0.0006801964,0.00011207354,0.0003087699,0.00011082031],"domain_scores_gemma":[0.99931407,0.00014191393,0.00038545474,0.000043955955,0.000066109904,0.000048472364],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003452379,0.000097532866,0.0002125063,0.00018509368,0.0000012685662,0.000004292203,0.00011960906,0.00009384742,0.000041611955],"category_scores_gemma":[0.0012735493,0.00009174151,0.000030815238,0.0003144051,0.0000332208,0.00029449642,0.00001265696,0.00016363383,7.954405e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005966862,0.00009463358,0.21117477,0.00001774816,0.0000056722324,0.0000059109448,0.000459815,0.000023787377,0.78767705,0.0000049692,8.082014e-7,0.00047518627],"study_design_scores_gemma":[0.0008428639,0.00002435744,0.16199052,0.00017284561,0.000004334909,0.000012702647,0.00006100752,0.00015516828,0.8365254,0.000038047696,0.000098011085,0.00007476973],"about_ca_topic_score_codex":0.0000887496,"about_ca_topic_score_gemma":0.00020580413,"teacher_disagreement_score":0.049184237,"about_ca_system_score_codex":0.00023844391,"about_ca_system_score_gemma":0.000050950184,"threshold_uncertainty_score":0.374111},"labels":[],"label_agreement":null},{"id":"W1998559333","doi":"10.1016/j.enggeo.2005.09.029","title":"Remediation of a heavy metal-contaminated soil by a rhamnolipid foam","year":2006,"lang":"en","type":"article","venue":"Engineering Geology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":183,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Concordia University","keywords":"Rhamnolipid; Distilled water; Environmental remediation; Contamination; Foam fractionation; Metal; Chemistry; Human decontamination; Bioremediation; Soil contamination; Soil water; Waste management; Environmental chemistry; Chromatography; Environmental science; Pulmonary surfactant","score_opus":0.002256158423419197,"score_gpt":0.15838086018740427,"score_spread":0.15612470176398507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998559333","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99713427,0.00005927825,0.0012127518,0.00019106104,0.00023585033,0.00008653397,0.000009445535,0.00005785436,0.0010129522],"genre_scores_gemma":[0.99866503,0.000009298103,0.0004823885,0.000049323524,0.0000365417,0.000003253071,0.000047688587,0.000008119641,0.0006983583],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999321,0.000017327284,0.0002083269,0.00015425403,0.00010406127,0.00019502897],"domain_scores_gemma":[0.9997571,0.00002513805,0.000068590896,0.00010751182,0.000007383032,0.000034268],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012090625,0.00009448018,0.00013536727,0.000036884692,0.000016619359,0.0000030883186,0.000092439026,0.000091510956,0.00083993835],"category_scores_gemma":[0.000039955186,0.00009128394,0.000034273377,0.0001628135,0.000052566,0.00005539349,0.000042645333,0.000065988184,0.00016259268],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000075876014,0.00004328226,0.011263666,0.00000594328,0.0000063768325,0.0000013077376,0.000038397848,0.003005977,0.9787644,0.000058896814,0.0064323884,0.00037176406],"study_design_scores_gemma":[0.00074624,0.00011707417,0.13319142,0.0000063360917,0.000017231227,0.0000117682275,0.000009294215,0.00969678,0.8208932,0.00005148533,0.034977198,0.00028192467],"about_ca_topic_score_codex":0.0005367541,"about_ca_topic_score_gemma":0.00013770013,"teacher_disagreement_score":0.15787117,"about_ca_system_score_codex":0.00004902398,"about_ca_system_score_gemma":0.0000044452804,"threshold_uncertainty_score":0.9196736},"labels":[],"label_agreement":null},{"id":"W1998950075","doi":"10.1002/rem.21356","title":"Concurrent and Complete Anaerobic Reduction and Microaerophilic Degradation of Mono‐, Di‐, and Trichlorobenzenes","year":2013,"lang":"en","type":"article","venue":"Remediation Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"WSP (Canada)","funders":"","keywords":"Chlorobenzene; Microaerophile; Chemistry; Biodegradation; Microcosm; Degradation (telecommunications); Anaerobic exercise; Stable-isotope probing; Environmental chemistry; Microbial population biology; Microorganism; Organic chemistry; Bacteria; Biology; Catalysis; Physiology","score_opus":0.014097456226435299,"score_gpt":0.20961007828698827,"score_spread":0.19551262206055298,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998950075","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99841577,0.00034357197,0.00020140929,0.00064948574,0.00017638196,0.0001699406,0.0000049901964,0.0000070963697,0.00003138442],"genre_scores_gemma":[0.99716043,0.0020839581,0.00059102493,0.000037207752,0.000062453044,0.0000013988004,0.0000086481,0.0000051130073,0.00004977191],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99922967,0.000059841677,0.0002862035,0.00014657366,0.00016338333,0.00011430579],"domain_scores_gemma":[0.99951166,0.000023965633,0.00024929555,0.000050633935,0.00003323917,0.00013120359],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021016381,0.000091070535,0.00012077205,0.00006288734,0.000111475805,0.000060655897,0.00004193861,0.00004971156,0.00027720167],"category_scores_gemma":[0.000042661504,0.000075687836,0.000016430988,0.00011077948,0.00013013105,0.00036260232,0.000039620623,0.00009019782,0.000015194983],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000047995422,0.000018929994,0.034693893,0.000008287577,0.0000064866376,2.2052373e-7,0.0002671667,0.00000786896,0.89688283,0.000013241816,0.0005959268,0.06750037],"study_design_scores_gemma":[0.0010547063,0.0001496825,0.96540284,0.000024165896,0.000028037486,0.00016331291,0.00027290685,0.0016731387,0.029575516,0.00019122763,0.0012789194,0.00018557321],"about_ca_topic_score_codex":0.00005523172,"about_ca_topic_score_gemma":0.000013498358,"teacher_disagreement_score":0.93070894,"about_ca_system_score_codex":0.00004215214,"about_ca_system_score_gemma":0.000008197837,"threshold_uncertainty_score":0.30864602},"labels":[],"label_agreement":null},{"id":"W1999208657","doi":"10.1023/a:1005670031432","title":"Quantitative analysis of biosurfactants using Fourier Transform Infrared (FT-IR) spectroscopy","year":2000,"lang":"en","type":"article","venue":"Biotechnology Letters","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Chemistry; Nitrile; Infrared spectroscopy; Chromatography; Analytical Chemistry (journal); Organic chemistry","score_opus":0.012247092523266383,"score_gpt":0.2429467572210435,"score_spread":0.2306996646977771,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999208657","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933031,0.000015056577,0.0014914841,0.00392471,0.00006184667,0.0001733329,0.00009148561,0.00008008663,0.0008588674],"genre_scores_gemma":[0.958893,0.0001023787,0.039681688,0.001173632,0.0000069789453,0.0000013326841,0.000021755355,0.000013590923,0.000105631916],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99867874,0.000040282364,0.00035370453,0.00036125357,0.00022023024,0.0003458149],"domain_scores_gemma":[0.9994684,0.000023751723,0.00012982302,0.00031579152,0.000005889655,0.00005635655],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015002752,0.00018213002,0.0003322293,0.00027297754,0.000080984915,0.000011023338,0.00025098884,0.00026215104,0.008111043],"category_scores_gemma":[0.000016961196,0.00016500433,0.00015194017,0.001742467,0.0006166919,0.0001311101,0.000036045225,0.00016232581,0.00022980239],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005698187,0.000048357433,0.006819118,0.0000022932898,0.00020802513,0.000008004553,0.00015664015,0.0003209062,0.98947304,0.000024176159,0.0009809539,0.0019014758],"study_design_scores_gemma":[0.00048560693,0.0001317584,0.024393173,0.000009209204,0.00036710998,0.000005193708,0.000093406255,0.008782828,0.96117043,0.000058083708,0.00415167,0.0003515178],"about_ca_topic_score_codex":0.00022298621,"about_ca_topic_score_gemma":0.00017087438,"teacher_disagreement_score":0.038190205,"about_ca_system_score_codex":0.00013146175,"about_ca_system_score_gemma":0.0000103027105,"threshold_uncertainty_score":0.9927957},"labels":[],"label_agreement":null},{"id":"W1999242819","doi":"10.1007/s00449-008-0261-1","title":"A rotating disk apparatus for assessing the biodegradation of polycyclic aromatic hydrocarbons transferring from a non-aqueous phase liquid to solutions of surfactant Brij 35","year":2008,"lang":"en","type":"article","venue":"Bioprocess and Biosystems Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"McGill University","keywords":"Biodegradation; Pulmonary surfactant; Aqueous solution; Chemistry; Dissolution; Phase (matter); Partition coefficient; Aqueous two-phase system; Mass transfer; Chromatography; Micelle; Environmental chemistry; Solubilization; Chemical engineering; Organic chemistry","score_opus":0.01793340382129259,"score_gpt":0.2395139147658285,"score_spread":0.2215805109445359,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999242819","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9754637,0.00022575249,0.023543509,0.000057776935,0.00009854304,0.0004755768,0.000083802406,0.000029050543,0.000022304419],"genre_scores_gemma":[0.9981277,0.000027865666,0.0017386302,0.0000115359235,0.00003415956,0.000020721694,0.000017663082,0.000014711724,0.000007001684],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99889296,0.0000135684095,0.00044291487,0.00023024772,0.00018186364,0.00023845209],"domain_scores_gemma":[0.9995641,0.000076113225,0.00014498204,0.0001210679,0.0000050478257,0.00008867184],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018987946,0.00016058485,0.0002530434,0.000058336103,0.0001678972,0.000026003143,0.00013036109,0.000066515735,0.000003285068],"category_scores_gemma":[0.000037836307,0.000119248245,0.000060936178,0.00031901302,0.000056406876,0.00013702999,0.000033775257,0.000055155655,0.0000016138249],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020934838,0.00005247629,0.0011644268,0.00006653643,0.000018585302,7.202881e-7,0.0009542173,0.0001904648,0.9962307,0.0000014689866,0.0000066582106,0.0012927988],"study_design_scores_gemma":[0.001119483,0.0002757266,0.00744204,0.0005200038,0.00006224426,0.000022510269,0.00045635848,0.16457798,0.8249949,0.0000054205693,0.00014240136,0.0003809009],"about_ca_topic_score_codex":0.00081007753,"about_ca_topic_score_gemma":0.000075930475,"teacher_disagreement_score":0.17123578,"about_ca_system_score_codex":0.000033850327,"about_ca_system_score_gemma":0.000018183033,"threshold_uncertainty_score":0.48628023},"labels":[],"label_agreement":null},{"id":"W1999357210","doi":"10.1080/15226510903535106","title":"Shifts in Root-Associated Microbial Communities of<i>Typha Latifolia</i>Growing in Naphthenic Acids and Relationship to Plant Health","year":2010,"lang":"en","type":"article","venue":"International Journal of Phytoremediation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Phytoremediation; Microbial population biology; Environmental remediation; Wetland; Temperature gradient gel electrophoresis; Typha; Microorganism; Naphthenic acid; Tailings; Environmental science; Aquatic plant; Biology; Typha angustifolia; Macrophyte; Environmental chemistry; Botany; Ecology; Contamination; Chemistry; Bacteria","score_opus":0.012377220379799301,"score_gpt":0.2563563289933928,"score_spread":0.24397910861359348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999357210","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99721545,0.00001409025,0.00003654439,0.0016625348,0.00082924176,0.00011261566,0.000043830758,0.000004211511,0.00008148884],"genre_scores_gemma":[0.998884,0.000025373167,0.0006314763,0.00031461986,0.00009576211,7.3105787e-7,0.000033929693,0.00000686753,0.000007247486],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99860746,0.0001175268,0.0006493046,0.00008666641,0.00039918016,0.00013988838],"domain_scores_gemma":[0.9991549,0.00016095844,0.00047685465,0.00006759664,0.000060617644,0.00007907322],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010509406,0.000091596536,0.00017951403,0.00029283742,0.000030186751,0.00002443744,0.00025332297,0.000078990284,0.000113985174],"category_scores_gemma":[0.0003186659,0.00008769817,0.00004032247,0.00022846185,0.00005642932,0.00039728943,0.00007118897,0.00032240152,0.00000966277],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000077328456,0.00009900638,0.86361396,0.0000031519423,0.000009208079,0.0000033089368,0.0030668033,0.00021025717,0.13130346,0.00007287967,0.00022788289,0.0013127712],"study_design_scores_gemma":[0.00091536413,0.00006942188,0.9926548,0.000084666324,0.0000026252978,0.000007605724,0.00018376597,0.00017067559,0.0051025613,0.0002920091,0.0004339083,0.00008257454],"about_ca_topic_score_codex":0.00059032755,"about_ca_topic_score_gemma":0.021623645,"teacher_disagreement_score":0.12904088,"about_ca_system_score_codex":0.00025101722,"about_ca_system_score_gemma":0.000060777737,"threshold_uncertainty_score":0.9962292},"labels":[],"label_agreement":null},{"id":"W1999540412","doi":"10.1002/etc.5620190706","title":"Release of polycyclic aromatic hydrocarbons from contaminated soils by surfactant and remediation of this effluent by<i>Penicillium</i>spp","year":2000,"lang":"en","type":"article","venue":"Environmental Toxicology and Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Environmental remediation; Environmental chemistry; Effluent; Contamination; Environmental science; Polycyclic aromatic hydrocarbon; Soil contamination; Bioremediation; Penicillium; Soil water; Chemistry; Waste management; Environmental engineering; Ecology; Biology; Engineering; Soil science","score_opus":0.002586403955672024,"score_gpt":0.17078959881803457,"score_spread":0.16820319486236254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999540412","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997599,0.00064366736,0.0000012935847,0.00010310518,0.000020128744,0.00012747107,0.00023495984,0.000010385225,0.0012599946],"genre_scores_gemma":[0.99718,0.0013551095,0.000043261116,0.00016576861,0.0000072910475,0.0000035404992,0.00022588656,0.000009568359,0.0010095756],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998922,0.000048538775,0.00035486906,0.00031598588,0.00017298912,0.00018561647],"domain_scores_gemma":[0.9994563,0.00007204953,0.00018383887,0.00015849224,2.6911312e-7,0.00012904227],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009256209,0.00017042231,0.00024480466,0.000007155981,0.00005429429,0.000004788898,0.000105173756,0.00021487447,0.005431589],"category_scores_gemma":[0.000013628337,0.00016334049,0.000035032528,0.000044944296,0.000574906,0.000068613626,0.000058294976,0.00011855769,0.00005207619],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000061043684,0.0002246597,0.030748986,0.0000058578553,0.00002188231,0.0000015677828,0.00016465355,8.714903e-7,0.96457905,3.8685894e-8,0.002005065,0.0021863135],"study_design_scores_gemma":[0.0008641784,0.00008154351,0.036377437,0.00001015082,0.00003882604,0.000005303807,0.00007508995,0.00012076547,0.9609006,0.000028080678,0.0013343354,0.00016369541],"about_ca_topic_score_codex":0.00013090884,"about_ca_topic_score_gemma":0.000010348321,"teacher_disagreement_score":0.00562845,"about_ca_system_score_codex":0.00007738723,"about_ca_system_score_gemma":0.0000052880764,"threshold_uncertainty_score":0.99547756},"labels":[],"label_agreement":null},{"id":"W1999766305","doi":"10.1080/00986445.2013.819351","title":"APPLICATION OF POWER LAW LOGISTIC MODEL TO GROWTH KINETICS OF<i>BACILLUS LICHENIFORMIS</i>MS3 ON A WATER-INSOLUBLE SUBSTRATE","year":2013,"lang":"en","type":"article","venue":"Chemical Engineering Communications","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Polytechnique Montréal","funders":"","keywords":"Bacillus licheniformis; Chemistry; Decane; Biodegradation; Hydrocarbon; Substrate (aquarium); Population; Chromatography; Mass transfer; Kinetics; Bacterial growth; Chemical engineering; Bacteria; Organic chemistry; Ecology; Biology","score_opus":0.016360127747326918,"score_gpt":0.2164452122017595,"score_spread":0.20008508445443257,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999766305","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9710481,0.000013443281,0.01924017,0.00096852967,0.00002860301,0.00048636537,0.000039414237,0.00007662401,0.008098741],"genre_scores_gemma":[0.98681283,0.0000075220973,0.012936522,0.00012846755,0.0000037956047,0.00002896759,0.000042500444,0.000011696721,0.000027713128],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99927527,0.0000073410106,0.00028542752,0.00013498148,0.00013313882,0.00016382289],"domain_scores_gemma":[0.999069,0.000045486635,0.00005317137,0.0006912918,0.000039530198,0.000101540994],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000060503677,0.00010678725,0.00013123655,0.000025301693,0.000021847793,0.000009136524,0.000562727,0.00007256532,0.000097439006],"category_scores_gemma":[0.000043284446,0.000090127316,0.000041357194,0.0001555465,0.0001251479,0.00006034378,0.00024836932,0.00010827699,0.00024326511],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000028999505,0.000112617585,0.000058610385,0.0000109576295,0.000004405818,1.7718866e-8,0.00012141947,0.010319901,0.98700845,0.002139924,0.0001263417,0.00009443157],"study_design_scores_gemma":[0.00011312708,0.000027781423,0.0003936962,0.0000111913805,0.0000065188897,4.7711313e-7,0.0000052195323,0.05161647,0.94692713,0.00020473432,0.0005766058,0.000117027725],"about_ca_topic_score_codex":0.0001591016,"about_ca_topic_score_gemma":0.000006530263,"teacher_disagreement_score":0.04129657,"about_ca_system_score_codex":0.00006640857,"about_ca_system_score_gemma":0.00000303386,"threshold_uncertainty_score":0.36752853},"labels":[],"label_agreement":null},{"id":"W1999828602","doi":"10.1016/j.chemosphere.2005.03.038","title":"Effects of in-situ ozonation on indigenous microorganisms in diesel contaminated soil: Survival and regrowth","year":2005,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Ministry of Environment","keywords":"Environmental chemistry; Phenanthrene; Chemistry; Incubation; Population; Diesel fuel; Biodegradation; Soil contamination; Heterotroph; Bioremediation; Microorganism; Contamination; Total petroleum hydrocarbon; Bacteria; Biology; Ecology; Organic chemistry","score_opus":0.003608053074553853,"score_gpt":0.18829626160003812,"score_spread":0.18468820852548426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999828602","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959854,0.00005665161,0.00000347987,0.000116364245,0.000040758725,0.00021845633,0.0000019730053,0.00001079895,0.0035661259],"genre_scores_gemma":[0.99942076,0.000060582304,0.00013878768,0.00010477064,0.00000985748,0.0000018554815,0.0000061916003,0.0000073678093,0.0002498108],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99933976,0.00003124227,0.00016770519,0.00018543404,0.00012225333,0.0001535812],"domain_scores_gemma":[0.99977535,0.000045933983,0.00006378968,0.000073144605,0.0000051498428,0.00003664218],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013279692,0.00009539073,0.00013647033,0.000012739932,0.000019945503,0.0000073265937,0.00008240797,0.00008881386,0.0001689022],"category_scores_gemma":[0.00003478073,0.00008679939,0.000013673124,0.00019167333,0.00006993645,0.000074780255,0.000044577864,0.00008665704,0.00007269136],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029618075,0.00014955467,0.099196635,0.000023085593,0.0000020184993,0.0000045530865,0.0010955319,0.0000118847765,0.88663286,0.000007452271,0.00008603788,0.012760786],"study_design_scores_gemma":[0.0006153031,0.000031810076,0.43548313,0.000016570148,0.0000014077145,5.3632067e-7,0.000057651334,0.000013507996,0.5635904,0.000013185071,0.00011434582,0.00006216373],"about_ca_topic_score_codex":0.00019648286,"about_ca_topic_score_gemma":0.003768256,"teacher_disagreement_score":0.3362865,"about_ca_system_score_codex":0.00014988713,"about_ca_system_score_gemma":0.000008329642,"threshold_uncertainty_score":0.35395765},"labels":[],"label_agreement":null},{"id":"W2000388820","doi":"10.1016/j.soilbio.2008.09.006","title":"Hydrocarbon degradation potential and activity of endophytic bacteria associated with prairie plants","year":2008,"lang":"en","type":"article","venue":"Soil Biology and Biochemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":149,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Rhizosphere; Phytoremediation; Botany; Biology; Microbial population biology; Microbial biodegradation; Environmental chemistry; Pseudomonas; Rhizobacteria; Microorganism; Bacteria; Chemistry; Ecology; Contamination","score_opus":0.006287974298648709,"score_gpt":0.18994259681151973,"score_spread":0.183654622512871,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000388820","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9994598,0.000023817389,0.000005958387,0.00007749039,0.000025254765,0.000043979617,0.000045162982,0.00001100168,0.00030755298],"genre_scores_gemma":[0.9996735,0.00006459068,0.000036027515,0.000029534145,0.000012123504,8.3645597e-7,0.00006293052,0.000002574396,0.0001179257],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995506,0.000024811518,0.0000818121,0.00018329662,0.000048968377,0.00011052376],"domain_scores_gemma":[0.99977976,0.000017642275,0.000093335904,0.0000599806,0.000004686948,0.00004461379],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000059655835,0.000083769555,0.000103568076,0.000007718053,0.00006222417,0.000002808361,0.00003903123,0.00013506445,0.000051291452],"category_scores_gemma":[0.000025169822,0.00006285075,0.000011433856,0.00004378367,0.00041976108,0.000034184486,0.000041809682,0.00005868117,0.000002417779],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005889816,0.0000358339,0.16115467,0.000004078246,0.000010833389,0.0000023942773,0.000018054741,3.145167e-7,0.8380089,2.340673e-7,0.00004393738,0.0006618838],"study_design_scores_gemma":[0.0003020769,0.000048743732,0.36473677,0.0000058770743,0.00000614597,0.000025533494,0.000005653622,0.00003607793,0.6347424,0.000008714001,0.000016135931,0.00006589381],"about_ca_topic_score_codex":0.000055345918,"about_ca_topic_score_gemma":0.000039174694,"teacher_disagreement_score":0.2035821,"about_ca_system_score_codex":0.000016595635,"about_ca_system_score_gemma":0.000013025684,"threshold_uncertainty_score":0.25629792},"labels":[],"label_agreement":null},{"id":"W2000435353","doi":"10.2118/86663-ms","title":"Oily Sludge Degradation Study Under Arid Conditions Using Landfarm and Bioreactor Technologies","year":2004,"lang":"en","type":"article","venue":"SPE International Conference on Health, Safety, and Environment in Oil and Gas Exploration and Production","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Environmental science; Degradation (telecommunications); Bioreactor; Waste management; Arid; Pulp and paper industry; Environmental engineering; Engineering; Chemistry; Biology; Ecology","score_opus":0.06396341611111446,"score_gpt":0.2922788728248564,"score_spread":0.22831545671374193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000435353","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.81356376,0.00010925166,0.000310904,0.18509695,0.00023456493,0.00025372457,0.000031028885,0.00003646529,0.00036334712],"genre_scores_gemma":[0.89685273,0.10226845,0.00033946842,0.00025093128,0.00003792137,0.000012104707,0.00008666448,0.000006586891,0.00014513925],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.998957,0.00005045355,0.00027482788,0.0003977667,0.00018987877,0.00013009168],"domain_scores_gemma":[0.99971074,0.0000132318455,0.00011984016,0.000085850625,0.000008851191,0.00006149348],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025415968,0.00014007973,0.00012582135,0.00010022409,0.0002040185,0.000061143655,0.000042770516,0.000063217754,0.00008702395],"category_scores_gemma":[0.000017895365,0.00012446931,0.000008828455,0.00007134661,0.00018695735,0.00038797822,0.000059818445,0.00012106604,0.000011995938],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003082364,0.00061165553,0.014408266,0.00003915605,0.000025505911,0.0000031665,0.003051544,0.0014228064,0.032014854,0.003717746,0.00006422806,0.94433284],"study_design_scores_gemma":[0.012823111,0.003906758,0.32283974,0.00060057436,0.000104598344,0.00022011614,0.048486564,0.008163092,0.012480578,0.57040924,0.01757174,0.0023938555],"about_ca_topic_score_codex":0.0004541594,"about_ca_topic_score_gemma":0.0007017747,"teacher_disagreement_score":0.941939,"about_ca_system_score_codex":0.00015791859,"about_ca_system_score_gemma":0.000016127855,"threshold_uncertainty_score":0.5075711},"labels":[],"label_agreement":null},{"id":"W2000501692","doi":"10.1016/j.jcis.2006.10.026","title":"Enhanced aqueous solubilization of tetrachloroethylene by a rhamnolipid biosurfactant","year":2006,"lang":"en","type":"article","venue":"Journal of Colloid and Interface Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Rhamnolipid; Tetrachloroethylene; Chemistry; Pulmonary surfactant; Aqueous solution; Critical micelle concentration; Micelle; Chromatography; Solubility; Aqueous two-phase system; Surface tension; Organic chemistry; Trichloroethylene; Pseudomonas aeruginosa; Bacteria","score_opus":0.0024246054092974968,"score_gpt":0.20516937624949685,"score_spread":0.20274477084019935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000501692","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960164,0.0002303359,0.001290349,0.00016338514,0.00027822182,0.00008407392,0.000012956885,0.000005570063,0.0019187301],"genre_scores_gemma":[0.99878705,0.00016370423,0.00065612426,0.00005590801,0.000023687191,1.9895397e-7,6.120535e-7,0.0000043650793,0.0003083819],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986081,0.000025172201,0.0004899118,0.00017329534,0.0004986554,0.00020488183],"domain_scores_gemma":[0.9992193,0.000028666767,0.00047832285,0.000096864555,0.00007616067,0.00010066216],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006299495,0.00010443694,0.00018557238,0.00007949641,0.00009517285,0.000049737377,0.0002972495,0.00004637272,0.00039680928],"category_scores_gemma":[0.00008854851,0.00007800448,0.000034642107,0.00047621297,0.0006764709,0.00048415834,0.00008691495,0.000095672454,0.000014322567],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035053006,0.00007966774,0.0016106796,0.0000041554786,0.0000020427592,1.9515947e-7,0.00012801657,0.00013461808,0.99447286,0.000008376089,0.0023596976,0.0011646517],"study_design_scores_gemma":[0.00031086474,0.00028277663,0.004381664,0.00002296162,0.0000063289413,0.000020587851,0.00009475628,0.00029475018,0.99150753,0.000051199335,0.0029330116,0.0000935493],"about_ca_topic_score_codex":0.00008574229,"about_ca_topic_score_gemma":0.000036382888,"teacher_disagreement_score":0.002965297,"about_ca_system_score_codex":0.00010740901,"about_ca_system_score_gemma":0.00005621872,"threshold_uncertainty_score":0.43447834},"labels":[],"label_agreement":null},{"id":"W2000568034","doi":"10.1021/bp000118j","title":"Two-Liquid-Phase Slurry Bioreactors To Enhance the Degradation of High-Molecular-Weight Polycyclic Aromatic Hydrocarbons in Soil","year":2000,"lang":"en","type":"article","venue":"Biotechnology Progress","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Polytechnique Montréal; Institut National de la Recherche Scientifique","funders":"","keywords":"Slurry; Degradation (telecommunications); Bioreactor; Biodegradation; Phase (matter); Chemistry; Environmental chemistry; Polycyclic aromatic hydrocarbon; Chromatography; Environmental science; Organic chemistry; Environmental engineering","score_opus":0.005208799888660877,"score_gpt":0.2518531165340666,"score_spread":0.24664431664540573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000568034","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992985,0.00010308962,0.000041665004,0.006004298,0.0000835395,0.00044477903,0.0000071598083,0.000087542605,0.00024293967],"genre_scores_gemma":[0.9987093,0.000052012438,0.00076975103,0.00029957626,0.000009251018,0.000026779342,0.0000137051065,0.000012665459,0.00010694617],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986708,0.000073903844,0.0003557385,0.0003585759,0.00021351405,0.00032746882],"domain_scores_gemma":[0.9993411,0.000023402084,0.0001294021,0.00044140618,0.0000011058252,0.00006362006],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020118404,0.00017132462,0.00019154597,0.000113808026,0.00006663512,0.000012198555,0.00048610524,0.0002484547,0.00019012493],"category_scores_gemma":[0.000038142618,0.00012524928,0.000043700424,0.0008544821,0.000572217,0.00007431972,0.00009987285,0.00018083242,0.00028153005],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008815518,0.00027674084,0.0021905028,0.0000021830936,0.000009607501,0.000010356445,0.00010235288,0.000004299465,0.92280567,0.00005982454,0.00009889692,0.074351415],"study_design_scores_gemma":[0.00045478196,0.00023880189,0.0029053784,0.000023734781,0.000010962217,0.0000063401417,0.000028348937,0.00008574457,0.99423146,0.00012137904,0.001725909,0.00016715743],"about_ca_topic_score_codex":0.00041286717,"about_ca_topic_score_gemma":0.0005392505,"teacher_disagreement_score":0.07418426,"about_ca_system_score_codex":0.00008292275,"about_ca_system_score_gemma":0.000016032714,"threshold_uncertainty_score":0.5107517},"labels":[],"label_agreement":null},{"id":"W2001365893","doi":"10.1128/aem.00536-15","title":"Identity and Substrate Specificity of Reductive Dehalogenases Expressed in Dehalococcoides-Containing Enrichment Cultures Maintained on Different Chlorinated Ethenes","year":2015,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Dehalococcoides; Enrichment culture; Chemistry; Geobacter; Substrate (aquarium); Reductive dechlorination; Vinyl chloride; Electron donor; Enzyme; Microbiology; Biochemistry; Biology; Bacteria; Genetics; Organic chemistry; Biodegradation; Catalysis","score_opus":0.01787724544336825,"score_gpt":0.22557936172023837,"score_spread":0.20770211627687013,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001365893","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988874,0.00008038229,0.000010226573,0.000053670312,0.00005983851,0.0003251044,0.00009744681,0.000012422028,0.00047348236],"genre_scores_gemma":[0.9994177,0.00020364737,0.00009810254,0.00011294198,0.000015700121,0.000012214203,0.00010488502,0.000009407846,0.00002535838],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99884605,0.000071009905,0.0002916103,0.00044219237,0.00008172501,0.00026740067],"domain_scores_gemma":[0.999586,0.000041212184,0.00012971148,0.00012865594,0.0000019280444,0.00011249391],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019119549,0.00022589881,0.0002821459,0.00004795544,0.00005413438,0.000013539054,0.00011703352,0.00012735736,0.00014989109],"category_scores_gemma":[0.00000895363,0.00017930834,0.000026892982,0.00006814948,0.0005101606,0.00007704884,0.00020293289,0.00012495072,0.0000253736],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025225946,0.00021669352,0.06836307,0.000004795918,0.000013671954,0.0000046084506,0.0007793897,0.0000437202,0.92957294,0.0001903735,0.00004949997,0.00050897256],"study_design_scores_gemma":[0.0015290991,0.00031055603,0.31142652,0.000011831913,0.000013681079,0.000014671964,0.0024668234,0.000009829416,0.6829576,0.0006713886,0.00032643514,0.00026159137],"about_ca_topic_score_codex":0.0001685145,"about_ca_topic_score_gemma":0.00017363683,"teacher_disagreement_score":0.24661538,"about_ca_system_score_codex":0.00016832497,"about_ca_system_score_gemma":0.000004314676,"threshold_uncertainty_score":0.73119813},"labels":[],"label_agreement":null},{"id":"W2001444768","doi":"10.1016/j.chemosphere.2007.05.037","title":"Investigation of the removal of heavy metals from sediments using rhamnolipid in a continuous flow configuration","year":2007,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":119,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds Québécois de la Recherche sur la Nature et les Technologies; Concordia University; Office of Research and Development","keywords":"Rhamnolipid; Sediment; Environmental remediation; Environmental chemistry; Chemistry; Zinc; Contamination; Heavy metals; Tributyltin; Environmental science; Geology; Ecology","score_opus":0.01727216167113789,"score_gpt":0.22317147137462082,"score_spread":0.2058993097034829,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001444768","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99739164,0.00003444356,0.00015717949,0.00006509981,0.00013616277,0.00018195652,0.0000139233725,0.0000053399453,0.0020142482],"genre_scores_gemma":[0.99583685,0.0000026935336,0.0038865549,0.0001293975,0.000018363426,3.003256e-7,0.000010498116,0.000004659344,0.00011065867],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99918765,0.000033869233,0.00032538423,0.00013495756,0.00020792751,0.00011020675],"domain_scores_gemma":[0.9995645,0.000025307327,0.0002181022,0.00014527922,0.000013918161,0.00003284885],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00028525104,0.00007394954,0.00013464688,0.0000055688242,0.000021547317,0.000004831859,0.000115880015,0.00007510883,0.0010139693],"category_scores_gemma":[0.000047767164,0.000056085933,0.000038779664,0.00023474351,0.0001399381,0.00008642923,0.000044812525,0.00005665983,0.000015035262],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019220732,0.000015976399,0.053965993,0.0000044182502,0.0000045844827,8.922905e-7,0.00040756675,0.00009712836,0.9430666,0.0000027419665,0.0001221988,0.0022926976],"study_design_scores_gemma":[0.00032562888,0.00000806,0.11386854,0.000027141255,0.00000798447,0.0000015384223,0.00012384805,0.00092068687,0.8842875,0.000073639516,0.00030129068,0.00005417087],"about_ca_topic_score_codex":0.00090066064,"about_ca_topic_score_gemma":0.00039274074,"teacher_disagreement_score":0.059902545,"about_ca_system_score_codex":0.0000833102,"about_ca_system_score_gemma":0.000016983433,"threshold_uncertainty_score":0.99989927},"labels":[],"label_agreement":null},{"id":"W2001764317","doi":"10.1002/jctb.632","title":"Alterations in fatty acid composition and fluidity of cell membranes affect the accumulation of PCB congener 2,2′,5,5′‐tetrachlorobiphenyl by <i>Ralstonia eutropha</i> H850","year":2002,"lang":"en","type":"article","venue":"Journal of Chemical Technology & Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Fructose; Chemistry; Membrane fluidity; Membrane; Fatty acid; Biphenyl; Bacteria; Composition (language); Biochemistry; Organic chemistry; Biology","score_opus":0.01589371593151248,"score_gpt":0.23828878896321035,"score_spread":0.22239507303169787,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001764317","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99336183,0.0010122788,0.0001911078,0.0050955997,0.00006290634,0.00016628682,0.000019992165,0.000025338852,0.00006466646],"genre_scores_gemma":[0.99743307,0.0008840149,0.0015582338,0.00009312781,0.000011696486,0.0000018638899,0.000004553954,0.0000075853145,0.0000058409964],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99873286,0.000054241955,0.0006476813,0.00019160238,0.00017682915,0.00019678305],"domain_scores_gemma":[0.99908143,0.000069552334,0.0005559895,0.00021975601,0.00003696641,0.000036287485],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024454537,0.00014909398,0.00036123177,0.00019091112,0.000040711082,0.000006315562,0.0003755838,0.0006191841,0.00021545589],"category_scores_gemma":[0.00008076315,0.000109054825,0.0000713948,0.0005680569,0.0010831576,0.00012230329,0.00013957631,0.00047712272,0.0000075250414],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003463836,0.00021109082,0.0052258647,0.000013391669,0.0000126794885,0.0000027321232,0.000042407766,0.000013560227,0.9914286,0.000043741682,0.00054021156,0.002431096],"study_design_scores_gemma":[0.0006929241,0.0001510293,0.0009585178,0.000018724202,0.00002445702,0.00007315133,0.000029562725,0.00025202663,0.9970311,0.00020072519,0.00047238448,0.00009542497],"about_ca_topic_score_codex":0.00000948508,"about_ca_topic_score_gemma":0.0000074684745,"teacher_disagreement_score":0.005602487,"about_ca_system_score_codex":0.000074392374,"about_ca_system_score_gemma":0.000006525051,"threshold_uncertainty_score":0.4775715},"labels":[],"label_agreement":null},{"id":"W2002059197","doi":"10.1007/s00253-010-2498-2","title":"Rhamnolipids: diversity of structures, microbial origins and roles","year":2010,"lang":"en","type":"review","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":945,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Armand Frappier Museum; Institut National de la Recherche Scientifique","funders":"","keywords":"Rhamnolipid; Operon; Pseudomonas aeruginosa; Bacteria; Microbiology; Biofilm; Gene; Burkholderia; Pseudomonas; Biology; Chemistry; Escherichia coli; Biochemistry; Genetics","score_opus":0.00997841872620323,"score_gpt":0.21996038188432382,"score_spread":0.2099819631581206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002059197","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05856352,0.93835956,0.000016233456,0.00017160746,0.00047828493,0.0010670704,0.0007845515,0.00013186077,0.0004273364],"genre_scores_gemma":[0.008550094,0.99025995,0.0008147439,0.000111249356,0.000039215178,0.0000039118413,0.00016118672,0.000017551594,0.0000420978],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99844575,0.000048780235,0.00042293413,0.0006902712,0.000036878442,0.00035539814],"domain_scores_gemma":[0.99916583,0.000055859404,0.00038764335,0.0003183586,0.0000059778617,0.00006633947],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0001659424,0.00041424588,0.0011143712,0.00015160818,0.00019947227,0.000008868729,0.00044526384,0.0026645332,0.00036170188],"category_scores_gemma":[0.000015069742,0.00031446782,0.000099806624,0.00021243324,0.0022106352,0.000023967768,0.0018562358,0.00080373284,0.00008269056],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014255352,0.000030664298,0.000078514044,0.00039704886,0.000054351116,0.0000024605408,0.00003687848,1.4347206e-8,0.43067423,0.001733951,0.0006400884,0.5663375],"study_design_scores_gemma":[0.00026366473,0.000048409205,0.000024979725,0.00007516148,0.00018070727,0.00020182287,0.000011642799,5.655804e-8,0.017209454,0.00016361725,0.98148674,0.00033376215],"about_ca_topic_score_codex":0.000059158992,"about_ca_topic_score_gemma":0.00027682097,"teacher_disagreement_score":0.98084664,"about_ca_system_score_codex":0.000053751282,"about_ca_system_score_gemma":0.000026999322,"threshold_uncertainty_score":0.99993074},"labels":[],"label_agreement":null},{"id":"W2002317194","doi":"10.1002/rem.20067","title":"Modeling remediation time using natural attenuation at a dry-cleaner site","year":2005,"lang":"en","type":"article","venue":"Remediation Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biorem Technologies (Canada)","funders":"","keywords":"Environmental remediation; Attenuation; Environmental science; Chlorinated solvents; Contamination; Vinyl chloride; Waste management; Natural (archaeology); Environmental chemistry; Environmental engineering; Chemistry; Geology; Engineering; Ecology","score_opus":0.01317945926892155,"score_gpt":0.22854445731039585,"score_spread":0.2153649980414743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002317194","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99495375,0.00005813255,0.0022977735,0.0015520384,0.000531009,0.0001661898,0.000007385456,0.000049554634,0.00038416212],"genre_scores_gemma":[0.99056125,0.000085513726,0.00645579,0.00075603457,0.0011545783,9.065321e-7,0.00008490458,0.000021952847,0.0008790723],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99796605,0.00011785646,0.000544658,0.0002639061,0.0007661376,0.00034140804],"domain_scores_gemma":[0.9992228,0.000029165663,0.00032990717,0.00014471286,0.00007175005,0.00020165318],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0007574385,0.00017769581,0.00015335779,0.00011075628,0.00037537672,0.00009545897,0.00015300648,0.00012345579,0.0044754967],"category_scores_gemma":[0.00017596266,0.0001596241,0.00009602097,0.00028346496,0.00004299295,0.0008933184,0.00008378228,0.00027505853,0.0041232943],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046414,0.000040731287,0.014019384,0.000002276765,0.000010867576,0.0000030784379,0.0007311174,0.104700156,0.86470157,0.0000015817674,0.0037612515,0.01198159],"study_design_scores_gemma":[0.0007372651,0.000022861872,0.0056393174,0.000015187303,0.00002708614,0.000056600617,0.000023396087,0.97793597,0.009507361,0.000026566599,0.0057515944,0.00025681543],"about_ca_topic_score_codex":0.0000190965,"about_ca_topic_score_gemma":0.00013339143,"teacher_disagreement_score":0.8732358,"about_ca_system_score_codex":0.0011959433,"about_ca_system_score_gemma":0.0000367386,"threshold_uncertainty_score":0.9966521},"labels":[],"label_agreement":null},{"id":"W2002819488","doi":"10.1007/s00253-003-1423-3","title":"Estimation of contaminant depletion in unsaturated soils using a reduced-order biodegradation model and carbon dioxide measurement","year":2004,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":57,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Polytechnique Montréal","funders":"","keywords":"Biodegradation; Mineralization (soil science); Hexadecane; Carbon dioxide; Chemistry; Environmental chemistry; Soil water; Environmental science; Soil science; Organic chemistry","score_opus":0.013019734850488216,"score_gpt":0.20577262476961694,"score_spread":0.19275288991912873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002819488","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99692655,0.00006425105,0.0021634935,0.00046406273,0.000027500566,0.00027468958,0.000008600853,0.000026913927,0.000043920365],"genre_scores_gemma":[0.9937471,0.00009511659,0.0060584545,0.00006372188,0.0000020322088,0.0000037991326,0.000022771665,0.000005224021,0.0000017479113],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99919873,0.000021296457,0.00025866585,0.00029806455,0.000041758412,0.00018145489],"domain_scores_gemma":[0.99970084,0.00000629817,0.00013192907,0.00012862658,0.000010400115,0.00002189543],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002264458,0.00012739739,0.00018391624,0.000100138765,0.000044203833,0.0000032594396,0.00008127229,0.00040121458,0.0000046698965],"category_scores_gemma":[0.000029678387,0.00010999741,0.000010203512,0.00023636881,0.0004226758,0.000032622258,0.000103328304,0.00012434505,0.00000240164],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004476279,0.000042238116,0.0005927104,0.000007626657,0.000005897003,6.814486e-7,0.000111516965,0.002176338,0.9936581,0.00044892234,0.0000018323374,0.0029093644],"study_design_scores_gemma":[0.00087752315,0.00005266048,0.0028885982,0.000018990902,0.000014320904,0.000031058,0.00007645663,0.0053361584,0.98986495,0.0006934754,0.000010746543,0.0001350776],"about_ca_topic_score_codex":0.00036399532,"about_ca_topic_score_gemma":0.0008828243,"teacher_disagreement_score":0.0038949612,"about_ca_system_score_codex":0.00015558234,"about_ca_system_score_gemma":0.000024703275,"threshold_uncertainty_score":0.44855642},"labels":[],"label_agreement":null},{"id":"W2003344072","doi":"10.1080/10889860490279487","title":"Impact of Chlorofluorocarbon 113 on Chlorinated Ethene Biodegradation","year":2004,"lang":"en","type":"article","venue":"Bioremediation Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Chemistry; Biodegradation; Chlorofluorocarbon; Degradation (telecommunications); Environmental remediation; Environmental chemistry; Ethanol; Aqueous solution; Bioremediation; Bioaugmentation; Nuclear chemistry; Organic chemistry; Contamination","score_opus":0.011606258407728947,"score_gpt":0.2548600105674551,"score_spread":0.24325375215972617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003344072","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979178,0.0000159147,0.00027994823,0.00049701845,0.00039890117,0.00013583299,0.000018266586,0.000027411112,0.0007089263],"genre_scores_gemma":[0.9990858,0.00013036712,0.00044345195,0.00009857779,0.00015833632,0.0000011039,0.000030962314,0.000011629218,0.000039767066],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99861914,0.000045735535,0.00041194877,0.00017945451,0.0005124995,0.00023121259],"domain_scores_gemma":[0.999209,0.000018286164,0.0004017114,0.00014668044,0.000047825615,0.00017650775],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000373889,0.00015736344,0.00015287564,0.00012654386,0.0000975657,0.000032414762,0.00017955598,0.00010863905,0.0015845171],"category_scores_gemma":[0.00012573569,0.00011660344,0.00014229564,0.00039953156,0.000111966074,0.00024165037,0.000028919703,0.00018522551,0.00038930235],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001717985,0.0003059904,0.06874681,0.0000030080037,0.00003338661,0.0000052542737,0.000415092,0.002346278,0.91671973,0.00007176701,0.0016616107,0.00951924],"study_design_scores_gemma":[0.0017104873,0.0006719892,0.71695226,0.000024554492,0.000015261403,0.000023580862,0.000024477566,0.0000827844,0.27941108,0.00047045993,0.00040877055,0.00020428588],"about_ca_topic_score_codex":0.00009537592,"about_ca_topic_score_gemma":0.000017116135,"teacher_disagreement_score":0.64820546,"about_ca_system_score_codex":0.0005541153,"about_ca_system_score_gemma":0.00007141278,"threshold_uncertainty_score":0.9993282},"labels":[],"label_agreement":null},{"id":"W2003397500","doi":"10.2118/136529-ms","title":"State of the Art of Remediation for Petroleum Industries","year":2010,"lang":"en","type":"article","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Fleming College","funders":"","keywords":"Environmental remediation; Bioremediation; Soil vapor extraction; Oil refinery; Waste management; Environmental science; Petroleum; Soil contamination; Air sparging; Petroleum industry; Underground storage tank; Groundwater; Groundwater remediation; Human decontamination; Environmental engineering; Contamination; Soil water; Engineering; Geology; Storage tank; Soil science","score_opus":0.008132873216154588,"score_gpt":0.2047836301751686,"score_spread":0.19665075695901402,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003397500","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953572,3.9119178e-7,0.00007877406,0.0005718628,0.00018332635,0.00011819888,0.000027516411,0.000004188183,0.0036585098],"genre_scores_gemma":[0.9962959,0.0000018270109,0.0005776793,0.00007537367,0.000007623979,0.000001037737,0.0000034414863,0.000001902825,0.0030351907],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996378,0.000007084743,0.00012598446,0.000057655107,0.00011212838,0.000059341935],"domain_scores_gemma":[0.99975485,0.000021726719,0.00009715094,0.00009947058,0.000010192651,0.000016591635],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001442382,0.0000319275,0.000046861136,0.0000072935277,0.000018350507,0.0000024911658,0.00009819708,0.000029040408,0.001098047],"category_scores_gemma":[0.00008223447,0.000018852166,0.0000230893,0.00007631524,0.000108814485,0.00004297447,0.000034515746,0.000044147968,0.000030438063],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006774549,0.000016012922,0.059838798,0.000001923567,0.0000013137125,5.007122e-9,0.000046913286,0.000013163744,0.92656904,0.000037178204,0.011228111,0.0022407747],"study_design_scores_gemma":[0.00013267667,0.000018663904,0.14362091,0.0000011262795,0.000002321942,1.1641666e-7,0.000012119433,0.0001168109,0.8301603,0.00009800751,0.025809826,0.000027128755],"about_ca_topic_score_codex":0.0000267528,"about_ca_topic_score_gemma":0.00059987087,"teacher_disagreement_score":0.09640873,"about_ca_system_score_codex":0.000006728938,"about_ca_system_score_gemma":0.000009979703,"threshold_uncertainty_score":0.9998151},"labels":[],"label_agreement":null},{"id":"W2003463412","doi":"10.6000/1927-5129.2015.11.32","title":"Isolation and Characterization of Hydrocarbon Degrading Bacteria from Petrol Contaminated Soil","year":2015,"lang":"en","type":"article","venue":"Journal of Basic & Applied Sciences","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Phenanthrene; Anthracene; Aromatic hydrocarbon; Naphthalene; Biodegradation; Chemistry; Hydrocarbon; Fluoranthene; Polycyclic aromatic hydrocarbon; Environmental chemistry; Xylene; Bioremediation; Stenotrophomonas; Bacteria; Pseudomonas; Micrococcus; Ralstonia; Microbiology; Organic chemistry; Benzene; Biology","score_opus":0.015576693967652997,"score_gpt":0.20966777555672897,"score_spread":0.19409108158907598,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003463412","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99817026,0.000010570321,0.00039871922,0.00013651252,0.00018446837,0.000058344387,0.000005250811,0.000004270471,0.0010316169],"genre_scores_gemma":[0.9990025,0.00001668558,0.0008315768,0.000077675606,0.000049330618,2.7669873e-7,0.000003945626,0.0000028124239,0.000015188073],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990757,0.000028173306,0.00032437893,0.00012252708,0.00034458638,0.00010460457],"domain_scores_gemma":[0.9993059,0.000025716243,0.0005035758,0.000046653146,0.000021381866,0.00009678381],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006601264,0.00007396272,0.00015380433,0.000059853133,0.00005456082,0.00004044536,0.00014228754,0.000042242453,0.00014817143],"category_scores_gemma":[0.000024500243,0.000055464956,0.000021089656,0.00022915089,0.00020738407,0.00029417177,0.000036224377,0.000061184575,0.000010622489],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003310328,0.000019599413,0.044620704,0.0000011272933,0.000003427256,5.3090844e-7,0.0004908305,0.000014026772,0.9524198,0.000013001077,0.00003525759,0.0023485573],"study_design_scores_gemma":[0.0008619141,0.0002299403,0.45468545,0.000026029138,0.000024182393,0.000009886108,0.0004720975,0.0024417343,0.5404881,0.00029359144,0.00033113325,0.00013588113],"about_ca_topic_score_codex":0.000041510233,"about_ca_topic_score_gemma":0.000025848381,"teacher_disagreement_score":0.4119317,"about_ca_system_score_codex":0.000051806615,"about_ca_system_score_gemma":0.000033706096,"threshold_uncertainty_score":0.22617953},"labels":[],"label_agreement":null},{"id":"W2004161247","doi":"10.1016/j.bbrc.2005.08.219","title":"Molecular basis for the substrate selectivity of bicyclic and monocyclic extradiol dioxygenases","year":2005,"lang":"en","type":"article","venue":"Biochemical and Biophysical Research Communications","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Catechol; Chemistry; Enzyme; Dioxygenase; Stereochemistry; Enzyme kinetics; Residue (chemistry); Substrate (aquarium); Active site; Substrate specificity; Biochemistry; Biology","score_opus":0.06457003442054712,"score_gpt":0.3419269779227308,"score_spread":0.27735694350218365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004161247","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899786,0.0006126216,0.00007217347,0.0087389555,0.00000390299,0.00032158627,0.000046562076,0.000009907384,0.00021567657],"genre_scores_gemma":[0.99735,0.001254917,0.001208676,0.000078592726,0.00002341793,0.000035699602,0.0000089430705,0.000005258981,0.000034541506],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991376,0.00010842117,0.00014604659,0.00019470145,0.0002040182,0.00020924043],"domain_scores_gemma":[0.99852055,0.00085215044,0.000035634355,0.0004440517,0.00003449985,0.00011311748],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036249086,0.00007934286,0.00010386256,0.000021959615,0.00024631727,0.000028599472,0.00041277538,0.000056841254,0.000031765427],"category_scores_gemma":[0.00026920385,0.000052102765,0.000046458703,0.00029691568,0.0012773962,0.0000587935,0.0003097736,0.00017363201,0.000012002866],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019351237,0.00015455419,0.00055138546,0.0000067862206,0.000009928116,4.4061224e-8,0.000045965404,7.7906867e-7,0.98433703,0.00045772726,0.0006978678,0.013718566],"study_design_scores_gemma":[0.00018349555,0.00006804178,0.03542468,0.000010052598,0.00001333664,0.0000012793322,0.000041105686,0.0027137876,0.95371443,0.0003840988,0.0073493714,0.00009630305],"about_ca_topic_score_codex":0.00012985185,"about_ca_topic_score_gemma":0.00004889,"teacher_disagreement_score":0.034873296,"about_ca_system_score_codex":0.000034862893,"about_ca_system_score_gemma":0.000013384478,"threshold_uncertainty_score":0.47066197},"labels":[],"label_agreement":null},{"id":"W2004994825","doi":"10.1139/w02-004","title":"Degradation of polycyclic aromatic hydrocarbons dissolved in Tween 80 surfactant solutions by<i>Sphingomonas paucimobilis</i>EPA 505","year":2002,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Sphingomonas paucimobilis; Phenanthrene; Fluoranthene; Pyrene; Chemistry; Pulmonary surfactant; Degradation (telecommunications); Substrate (aquarium); Biodegradation; Sphingomonas; Rhamnolipid; Nuclear chemistry; Polycyclic aromatic hydrocarbon; Chromatography; Organic chemistry; Bacteria; Biochemistry","score_opus":0.01451847172408341,"score_gpt":0.1915675380112024,"score_spread":0.177049066287119,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004994825","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971346,0.0005373726,0.000025934485,0.0013052085,0.00023324146,0.00013335937,0.00009560664,0.0000032540684,0.0005313894],"genre_scores_gemma":[0.99924576,0.00008178336,0.00017691773,0.00020953789,0.00001845153,7.665381e-7,0.00003454567,0.0000108023605,0.00022143243],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99844694,0.00014516356,0.0006953188,0.00018059068,0.00007358334,0.00045838722],"domain_scores_gemma":[0.99902236,0.00007422483,0.0004114999,0.00016256639,0.0000058160836,0.00032353026],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003783492,0.00015721218,0.0003156283,0.00018801834,0.000087812434,0.000014202073,0.00032904878,0.00015964967,0.0011436071],"category_scores_gemma":[0.00012288036,0.0001398534,0.00009936047,0.00033564746,0.0003258455,0.00014028013,0.000024487805,0.00022709936,0.00011244618],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005747603,0.000052830746,0.071254216,0.0000018725765,0.000015945781,0.0000131516135,0.00033642814,0.000011316211,0.9199557,0.0000027064652,0.007468106,0.00088203436],"study_design_scores_gemma":[0.0063428567,0.0014037794,0.39089102,0.00042772104,0.00023613113,0.0014855725,0.0011220902,0.00092596054,0.48059306,0.0009352902,0.113595955,0.0020405573],"about_ca_topic_score_codex":0.008686342,"about_ca_topic_score_gemma":0.08497068,"teacher_disagreement_score":0.4393626,"about_ca_system_score_codex":0.00036187854,"about_ca_system_score_gemma":0.000096636984,"threshold_uncertainty_score":0.9997695},"labels":[],"label_agreement":null},{"id":"W2005092462","doi":"10.1080/10934520600614348","title":"Bioaugmentation of Activated Sludge with Two<i>Pseudomonas putida</i>Strains for the Degradation of 4-Chlorophenol","year":2006,"lang":"en","type":"article","venue":"Journal of Environmental Science and Health Part A","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Università degli Studi di Camerino; University of British Columbia","keywords":"Pseudomonas putida; Activated sludge; Bioaugmentation; Bacteria; Microbiology; Population; Pseudomonadaceae; Green fluorescent protein; Strain (injury); Chemistry; Pseudomonas; Biology; Flocculation; Biochemistry; Microorganism; Wastewater; Gene; Environmental engineering; Organic chemistry","score_opus":0.021290438285794223,"score_gpt":0.26804912928768665,"score_spread":0.24675869100189243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005092462","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99794084,0.00007535509,0.00026578907,0.0012105667,0.00006530103,0.00031629627,0.000033521217,0.0000016638023,0.00009066352],"genre_scores_gemma":[0.9982883,0.00018501173,0.0012112944,0.00022952909,0.000028865667,0.0000017627276,0.0000043464843,0.0000039926244,0.00004693625],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99870455,0.000022699114,0.00043307585,0.0001281953,0.00052914105,0.00018232477],"domain_scores_gemma":[0.9990598,0.00003553595,0.000725017,0.0000825204,0.000015133661,0.00008199669],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001042912,0.000081223756,0.00014740153,0.000046159603,0.00019826686,0.000012933972,0.00015760145,0.000020649168,0.00010819045],"category_scores_gemma":[0.000010168571,0.000048436163,0.00003174,0.00022367414,0.0008075439,0.00030464702,0.000035767825,0.000059151866,0.0000024869855],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006123139,0.00012905852,0.030735744,0.000009468984,0.0000048686265,3.3228216e-7,0.00015692013,0.00015554031,0.9627237,0.00003212756,0.0004709336,0.0055200956],"study_design_scores_gemma":[0.001346401,0.00086769235,0.5669515,0.00003497281,0.000022038728,0.000028043158,0.0005848997,0.00013765333,0.42828798,0.000049909595,0.0015936093,0.00009527471],"about_ca_topic_score_codex":0.00015697344,"about_ca_topic_score_gemma":0.00012597855,"teacher_disagreement_score":0.5362158,"about_ca_system_score_codex":0.00018507056,"about_ca_system_score_gemma":0.000071542614,"threshold_uncertainty_score":0.29754293},"labels":[],"label_agreement":null},{"id":"W2005118242","doi":"10.1021/es062852q","title":"Metabolism of BTEX and Naphtha Compounds to Methane in Oil Sands Tailings","year":2007,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":167,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Syncrude (Canada); University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Syncrude; Canadian Natural Resources Limited","keywords":"BTEX; Naphtha; Oil sands; Xylene; Tailings; Chemistry; Ethylbenzene; Toluene; Environmental chemistry; Methanogenesis; Benzene; Biodegradation; Methane; Waste management; Organic chemistry; Materials science","score_opus":0.0045547134875978225,"score_gpt":0.2192443833576244,"score_spread":0.21468966987002658,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005118242","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964607,0.00007461245,0.00004270525,0.0005627031,0.00008755203,0.00010420831,0.0000069807825,0.000027918028,0.00263263],"genre_scores_gemma":[0.9969711,0.00007497801,0.002508069,0.00023535122,0.000007172787,0.0000025425263,0.0000015701,0.000006529225,0.00019272622],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983131,0.000013523799,0.00031671763,0.00048111967,0.00039345198,0.00048202876],"domain_scores_gemma":[0.9994825,0.000022020418,0.00009561627,0.00024103705,0.0000021667054,0.00015665333],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010383199,0.00014415424,0.00020316808,0.00045071615,0.00008490415,0.000010033078,0.00047578255,0.00012562037,0.0005776953],"category_scores_gemma":[0.000053494114,0.00013003264,0.000023237191,0.0015257318,0.002273524,0.00018865058,0.0006007389,0.00014695518,0.00014947342],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014047064,0.00006720652,0.09308737,0.0000011344425,0.0000011162987,0.000003866817,0.00021225362,0.0000072061907,0.8855439,0.00006261888,0.000019483605,0.020979792],"study_design_scores_gemma":[0.00032784924,0.0000788453,0.24830247,0.000005506052,0.0000035080807,0.000019306804,0.0003976916,0.000019095132,0.7433494,0.00014328687,0.0071944953,0.00015856075],"about_ca_topic_score_codex":0.00012605415,"about_ca_topic_score_gemma":0.00016506795,"teacher_disagreement_score":0.1552151,"about_ca_system_score_codex":0.00022492134,"about_ca_system_score_gemma":0.000010065187,"threshold_uncertainty_score":0.83768934},"labels":[],"label_agreement":null},{"id":"W2005437122","doi":"10.1002/bit.10358","title":"Biodegradation of gasoline by gellan gum‐encapsulated bacterial cells","year":2002,"lang":"en","type":"article","venue":"Biotechnology and Bioengineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University; McGill University; Biotechnology Research Institute","funders":"","keywords":"Biodegradation; Gasoline; Bioremediation; Chemistry; Bioaugmentation; Microcosm; Microbial consortium; Gellan gum; Environmental remediation; Environmental chemistry; Contamination; Chromatography; Bacteria; Food science; Microorganism; Organic chemistry; Ecology; Biology","score_opus":0.004957404504852228,"score_gpt":0.15391676556481348,"score_spread":0.14895936105996127,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005437122","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99865776,0.00011195291,0.00029503505,0.00047267578,0.0001398464,0.00007554001,0.000034027362,0.0001313717,0.00008177513],"genre_scores_gemma":[0.9985349,0.00041290355,0.00091547857,0.000022109478,0.00001242815,5.470274e-7,0.000016389973,0.0000071784093,0.00007806697],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999471,0.000006720782,0.00015654188,0.00016200925,0.000057966143,0.0001457763],"domain_scores_gemma":[0.99978393,0.000006246441,0.00006816033,0.00010361103,0.000003072165,0.000034955912],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000050962284,0.00009448755,0.000102875725,0.00004436073,0.000023273393,0.000005997725,0.00009024701,0.0002228031,0.0009257952],"category_scores_gemma":[0.00000987963,0.00008267295,0.000017060276,0.00017462776,0.00012895056,0.00004131227,0.00005759993,0.00007393915,0.000055237055],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000034902712,0.000022603557,0.00061917835,0.000004639847,0.000005507226,6.3433936e-7,0.000016020425,0.00000953032,0.9940834,0.000011213969,0.0015865698,0.003637187],"study_design_scores_gemma":[0.00020787747,0.000051726947,0.0010163264,0.0000051434804,0.0000060474677,0.000004531214,0.0000059000754,0.0033338303,0.9830405,0.0000027542767,0.012221313,0.00010401716],"about_ca_topic_score_codex":0.00002881129,"about_ca_topic_score_gemma":0.000007002789,"teacher_disagreement_score":0.011042893,"about_ca_system_score_codex":0.000016821496,"about_ca_system_score_gemma":7.060338e-7,"threshold_uncertainty_score":0.9999875},"labels":[],"label_agreement":null},{"id":"W2006238683","doi":"10.1007/s002530000520","title":"Enhancing pyrene mineralization in contaminated soil by the addition of humic acids or composted contaminated soil","year":2001,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":57,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Polytechnique Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Mineralization (soil science); Pyrene; Chemistry; Environmental chemistry; Humic acid; Bioremediation; Soil contamination; Contamination; Biodegradation; Amendment; Soil water; Organic chemistry; Soil science; Nitrogen; Environmental science; Ecology; Biology; Fertilizer","score_opus":0.005108309248945953,"score_gpt":0.19158676202778757,"score_spread":0.18647845277884162,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006238683","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99795485,0.00007523479,0.00021352145,0.00094378623,0.00007143027,0.00034847716,0.000083717714,0.00006208297,0.00024690584],"genre_scores_gemma":[0.998224,0.00034448743,0.00007228855,0.00056932005,0.0000070293745,0.00001189979,0.000516208,0.00000923772,0.00024548624],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988208,0.00007707382,0.00040224814,0.00035500518,0.000038664668,0.00030620082],"domain_scores_gemma":[0.9995021,0.00007283742,0.00020782155,0.00017694214,0.000013273802,0.000026976804],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023641152,0.0001855151,0.00028174318,0.00009472488,0.00009942357,0.0000066358593,0.0002153518,0.0006299223,0.00065750565],"category_scores_gemma":[0.000029643053,0.0001266323,0.000022644323,0.00050478074,0.0008668899,0.000040384028,0.00014222707,0.0002248187,0.00005311384],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019836343,0.000083234256,0.0024313994,0.000006307524,0.000013333346,0.0000039286833,0.00010428579,0.0000051726406,0.99226886,0.00011602017,0.0011881331,0.003580983],"study_design_scores_gemma":[0.0013451807,0.00015320508,0.0036575303,0.00001450293,0.000014398935,0.00008392245,0.00022988002,0.000050969604,0.98778117,0.000037205788,0.0064595332,0.00017247614],"about_ca_topic_score_codex":0.0003369806,"about_ca_topic_score_gemma":0.0071779066,"teacher_disagreement_score":0.006840926,"about_ca_system_score_codex":0.00006638939,"about_ca_system_score_gemma":0.000012542499,"threshold_uncertainty_score":0.7199226},"labels":[],"label_agreement":null},{"id":"W2006341751","doi":"10.1007/s10532-006-9062-x","title":"Effect of surfactants on plasticizer biodegradation by Bacillus subtilis ATCC 6633","year":2006,"lang":"en","type":"article","venue":"Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Adipate; Plasticizer; Biodegradation; Metabolite; Chemistry; Bacillus subtilis; Degradation (telecommunications); Surfactin; Micelle; Chromatography; Organic chemistry; Bacteria; Biochemistry; Aqueous solution; Biology; Polymer chemistry","score_opus":0.0031712191894201686,"score_gpt":0.19538578725091155,"score_spread":0.19221456806149137,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006341751","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959015,0.000026507054,0.00021561334,0.00015200114,0.00025347454,0.00033987683,0.00028470968,0.00006159246,0.002764685],"genre_scores_gemma":[0.99815685,0.000019783127,0.00015403159,0.000060891503,0.00003393822,0.0000046403493,0.0007412232,0.000014951676,0.0008136701],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983385,0.00014863673,0.0003901904,0.00037340014,0.0004921028,0.00025716855],"domain_scores_gemma":[0.9992929,0.00014525543,0.00024782846,0.00022803814,0.000018136885,0.00006781322],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00038862176,0.00022956647,0.00021530825,0.00006417775,0.00009295774,0.00003111261,0.00016500035,0.00014477632,0.0016386687],"category_scores_gemma":[0.00008264911,0.00018194845,0.00007435169,0.00035822045,0.00012759432,0.00021769373,0.000038863174,0.00008495207,0.00086242054],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019636386,0.00013686741,0.040530354,0.000015753132,0.0000069427397,7.7928826e-7,0.000019946845,0.00006977301,0.90924966,0.00002733126,0.03244702,0.01729918],"study_design_scores_gemma":[0.00088744966,0.00044133392,0.03918082,0.000016946635,0.000023432534,0.0000012014964,0.000005227042,0.0007662892,0.95018655,0.000017599254,0.008239866,0.00023325889],"about_ca_topic_score_codex":0.0008429475,"about_ca_topic_score_gemma":0.00017760249,"teacher_disagreement_score":0.04093689,"about_ca_system_score_codex":0.00016849767,"about_ca_system_score_gemma":0.0000094468205,"threshold_uncertainty_score":0.99991554},"labels":[],"label_agreement":null},{"id":"W2007193073","doi":"10.1021/es8009666","title":"Comparative Assessments of Benzene, Toluene, and Xylene Natural Attenuation by Quantitative Polymerase Chain Reaction Analysis of a Catabolic Gene, Signature Metabolites, and Compound-Specific Isotope Analysis","year":2008,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biodegradation; Chemistry; Isotope analysis; Metabolite; Environmental chemistry; Toluene; Benzene; Catabolism; Stable-isotope probing; Biochemistry; Metabolism; Biology; Bacteria; Organic chemistry; Genetics; Ecology; Microorganism","score_opus":0.011986268060412536,"score_gpt":0.2572888940095129,"score_spread":0.24530262594910035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007193073","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99725145,0.0017137898,0.0002802262,0.000099421006,0.000036877038,0.00024495038,0.00027156662,0.000015520503,0.00008621801],"genre_scores_gemma":[0.9962887,0.0009794502,0.002452998,0.000047678463,0.0000026326502,0.000005496324,0.00015687526,0.0000052807827,0.000060863535],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980876,0.000071138005,0.00041926804,0.000635049,0.0005051217,0.00028185113],"domain_scores_gemma":[0.99913293,0.00004306309,0.00043315667,0.00027963167,0.000013808055,0.00009743453],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0002820738,0.00020928195,0.00055916846,0.00090467645,0.00024103084,0.000013264648,0.00028330894,0.00013119236,0.00021789064],"category_scores_gemma":[0.0000130736325,0.00018825091,0.00007957134,0.0044675553,0.0029910891,0.0003909845,0.00023975123,0.00016358653,0.000009669883],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020312147,0.00012669689,0.2019199,0.0000010821396,0.00018938587,0.0000010276613,0.00036977022,0.000078687306,0.79653287,0.000049479127,0.000027160315,0.0006836574],"study_design_scores_gemma":[0.00023275755,0.00008314927,0.52864534,0.0000017291138,0.000267423,0.0000046558334,0.00037836784,0.0019183705,0.46807742,0.000008421445,0.00023948927,0.00014288632],"about_ca_topic_score_codex":0.00037215045,"about_ca_topic_score_gemma":0.0001727166,"teacher_disagreement_score":0.32845545,"about_ca_system_score_codex":0.0001689786,"about_ca_system_score_gemma":0.000014585711,"threshold_uncertainty_score":0.9997222},"labels":[],"label_agreement":null},{"id":"W2007443639","doi":"10.1007/s003000050025","title":"Aromatic hydrocarbon-degrading bacteria from soil near Scott Base, Antarctica","year":2000,"lang":"en","type":"article","venue":"Polar Biology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":139,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Antarctica New Zealand","keywords":"Bacteria; Bioremediation; Biology; Soil water; Aromatic hydrocarbon; Hydrocarbon; Environmental chemistry; Polycyclic aromatic hydrocarbon; Pseudomonas; Soil contamination; Achromobacter; Botany; Ecology; Chemistry; Organic chemistry","score_opus":0.008426264205170775,"score_gpt":0.20903797923935566,"score_spread":0.20061171503418487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007443639","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99508566,0.000052055635,0.0000088763045,0.00049975066,0.00019632262,0.000095046664,0.000080804464,0.000052290776,0.003929204],"genre_scores_gemma":[0.9966895,0.0000708061,0.0016812114,0.0011257017,0.00007593834,0.0000016360897,0.0001358693,0.000011499658,0.00020782152],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99896353,0.000093794755,0.00021520382,0.0003269762,0.000079197205,0.00032128097],"domain_scores_gemma":[0.9995552,0.00004063539,0.00005470242,0.00022619238,0.0000016055409,0.00012168427],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00012788852,0.00014571253,0.00016995845,0.000016788901,0.00011639046,0.000032619962,0.00021350825,0.0001320809,0.034194097],"category_scores_gemma":[0.000024426588,0.000121431585,0.000052455744,0.00012876728,0.00022729678,0.00008214204,0.000059877588,0.00010891609,0.00670963],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019983741,0.000041094027,0.1615501,0.0000013733578,0.0000127085195,0.000003237755,0.0001636469,0.000002727602,0.83047676,0.0000037917569,0.0009505462,0.0067740455],"study_design_scores_gemma":[0.0014161261,0.0003101754,0.6975386,0.00003656516,0.00006331601,0.000030545598,0.000051335297,0.003339228,0.15824036,0.0021355317,0.13586508,0.000973128],"about_ca_topic_score_codex":0.0030717442,"about_ca_topic_score_gemma":0.0005384305,"teacher_disagreement_score":0.6722364,"about_ca_system_score_codex":0.00006689657,"about_ca_system_score_gemma":0.000012097889,"threshold_uncertainty_score":0.99406374},"labels":[],"label_agreement":null},{"id":"W2007473057","doi":"10.1021/es062010r","title":"Growth and Yields of Dechlorinators, Acetogens, and Methanogens during Reductive Dechlorination of Chlorinated Ethenes and Dihaloelimination of 1,2-Dichloroethane","year":2007,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":145,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Dehalococcoides; Reductive dechlorination; Acetogenesis; Population; Chemistry; Vinyl chloride; Geobacter; Electron donor; Microbiology; Methanogenesis; Organic chemistry; Biology; Bacteria; Biodegradation; Methane; Catalysis; Genetics","score_opus":0.005624532730078424,"score_gpt":0.21479468282062752,"score_spread":0.2091701500905491,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007473057","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991209,0.00017571433,0.00006918893,0.00017683748,0.000051585812,0.00021473676,0.00001602785,0.00001739325,0.00015759787],"genre_scores_gemma":[0.99820054,0.00061163196,0.0011535478,0.000005099305,0.0000046601585,0.0000024144688,0.000002131491,0.000006988112,0.000012966105],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986249,0.000017373472,0.00034849363,0.00040483626,0.00034561212,0.00025879336],"domain_scores_gemma":[0.99940485,0.000042904445,0.00029572213,0.00015991805,0.000011108039,0.00008552582],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0006501422,0.00014459528,0.0002205149,0.0004041159,0.00010411071,0.000004591558,0.00018614966,0.00016488747,0.000049828483],"category_scores_gemma":[0.00012408575,0.00013552899,0.00001935635,0.0007899284,0.0042259796,0.00027859156,0.0004420412,0.000102763974,0.0000011218883],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038089373,0.00005611446,0.16333526,0.00001692172,0.0000055223863,0.000001219444,0.0004188913,0.0000017986017,0.8281949,0.00047891864,2.4658243e-7,0.0074521014],"study_design_scores_gemma":[0.00023001454,0.00014067556,0.3647611,0.000010179743,0.00001088423,0.000018073446,0.00065817183,0.000012920979,0.6337272,0.00034365058,0.0000086197115,0.00007848485],"about_ca_topic_score_codex":0.00006254232,"about_ca_topic_score_gemma":0.000023693168,"teacher_disagreement_score":0.20142585,"about_ca_system_score_codex":0.000100364516,"about_ca_system_score_gemma":0.0000088010365,"threshold_uncertainty_score":0.99848396},"labels":[],"label_agreement":null},{"id":"W2007642020","doi":"10.1016/j.jconhyd.2009.08.006","title":"Variations in expression of carbon isotope fractionation of chlorinated ethenes during biologically enhanced PCE dissolution close to a source zone","year":2009,"lang":"en","type":"article","venue":"Journal of Contaminant Hydrology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Golder Associates (Canada); University of Toronto","funders":"National Research Council Canada; Natural Sciences and Engineering Research Council of Canada; Environmental Security Technology Certification Program","keywords":"Dissolution; Isotope fractionation; Fractionation; Chemistry; Isotopes of carbon; Reductive dechlorination; Environmental chemistry; Isotope; Isotope analysis; Tetrachloroethylene; Biodegradation; Aquifer; Stable isotope ratio; Groundwater; Total organic carbon; Trichloroethylene; Geology; Chromatography; Organic chemistry","score_opus":0.006140584328035223,"score_gpt":0.22813789816678184,"score_spread":0.22199731383874663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007642020","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99538803,0.000020790801,0.0035415443,0.0006376069,0.00011463703,0.00014480282,0.0000028274885,0.0000043711207,0.00014539309],"genre_scores_gemma":[0.999319,0.0000641402,0.0004480981,0.000072354305,0.000024134586,0.0000010930296,0.0000021023354,0.000002978788,0.0000660778],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988007,0.00012711633,0.0006180649,0.00012744957,0.00018189459,0.00014478133],"domain_scores_gemma":[0.99907434,0.00006316401,0.0006660037,0.0000866455,0.000057352427,0.000052488194],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004149018,0.000087566645,0.00026511782,0.00015028994,0.00002816418,0.0000027809638,0.00013471005,0.00012859149,0.00012015516],"category_scores_gemma":[0.00019321279,0.00006783171,0.000051232262,0.00025871873,0.000047738737,0.00011433703,0.00003575912,0.00012873836,0.000003760118],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004383072,0.00020401916,0.014100723,0.000003114033,0.000004009226,0.000003161409,0.00051975594,0.0012516829,0.98092717,0.000018980963,0.0000058827172,0.0025232153],"study_design_scores_gemma":[0.00059330015,0.0005170297,0.44967157,0.000032808803,0.0000068460527,0.000011341011,0.00002809408,0.00027542916,0.54858994,0.000060070208,0.00016010637,0.000053427153],"about_ca_topic_score_codex":0.000087461136,"about_ca_topic_score_gemma":0.000099599696,"teacher_disagreement_score":0.43557087,"about_ca_system_score_codex":0.00010491925,"about_ca_system_score_gemma":0.000016503707,"threshold_uncertainty_score":0.27660966},"labels":[],"label_agreement":null},{"id":"W2007818266","doi":"10.1139/w03-083","title":"Influence of high salinities on the degradation of diesel fuel by bacterial consortia","year":2003,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Salinity; Diesel fuel; Bioremediation; Population; Halotolerance; Microbial population biology; Degradation (telecommunications); Environmental science; Environmental chemistry; Soil salinity; Pulp and paper industry; Botany; Chemistry; Contamination; Biology; Ecology; Bacteria","score_opus":0.009391737645947659,"score_gpt":0.18415128335359654,"score_spread":0.17475954570764887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007818266","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987882,0.000058490743,0.0000033200856,0.00036787015,0.00020918767,0.00006117832,0.00021531084,7.571494e-7,0.00029570292],"genre_scores_gemma":[0.9993603,0.00003755252,0.000072248644,0.0003857722,0.000010102592,2.065691e-7,0.000010774089,0.0000036419901,0.00011938914],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992179,0.00015364651,0.00036494576,0.00007237369,0.000041187624,0.00014994791],"domain_scores_gemma":[0.99929893,0.000090829555,0.00038086987,0.0000910379,0.00004385432,0.00009449471],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00031165744,0.000075343654,0.00016243853,0.00004725591,0.00004026296,0.0000056337767,0.00019093406,0.00007623152,0.0022298126],"category_scores_gemma":[0.00022864366,0.000050791237,0.000041695253,0.000085437416,0.00052016584,0.000049266604,0.000007712868,0.00009507308,0.000027000659],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020062054,0.000010866654,0.010415112,0.0000029905186,0.000013582408,0.000001635407,0.00013656366,0.000049606235,0.97874093,0.00025785563,0.0102955215,0.000055294724],"study_design_scores_gemma":[0.0005316056,0.00031303358,0.026460916,0.00003143325,0.000019321855,0.00007445565,0.00018915423,3.1470915e-7,0.9191673,0.00016775882,0.052920897,0.00012384416],"about_ca_topic_score_codex":0.0022184642,"about_ca_topic_score_gemma":0.008729228,"teacher_disagreement_score":0.059573643,"about_ca_system_score_codex":0.00006898433,"about_ca_system_score_gemma":0.00016575321,"threshold_uncertainty_score":0.99868226},"labels":[],"label_agreement":null},{"id":"W2007996678","doi":"10.1002/rem.20233","title":"Evaluation of algal phytoremediation of light extractable petroleum hydrocarbons in subarctic climates","year":2009,"lang":"en","type":"article","venue":"Remediation Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Regina","funders":"U.S. Food and Drug Administration; Government of Canada; U.S. Environmental Protection Agency","keywords":"Subarctic climate; Environmental remediation; Algae; Petroleum; Environmental chemistry; Environmental science; Phytoremediation; Hydrocarbon; Contamination; Chemistry; Geology; Ecology; Oceanography; Biology; Heavy metals","score_opus":0.014903314853770597,"score_gpt":0.25408351309098026,"score_spread":0.23918019823720965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007996678","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99599445,0.00012659373,0.00010139384,0.000667824,0.00027306276,0.00017646415,0.0000034348675,0.000008354147,0.0026483962],"genre_scores_gemma":[0.99925584,0.00017904883,0.00036864125,0.00005246517,0.000108214954,0.0000014415261,0.000013622099,0.0000060616794,0.000014661327],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9973454,0.00023270596,0.00070728373,0.0001555334,0.0013421001,0.00021701028],"domain_scores_gemma":[0.9989823,0.000044434964,0.000675273,0.00012577108,0.000077688324,0.00009450706],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030714967,0.00011418377,0.00019846427,0.00017699158,0.00004434225,0.00001657787,0.00014915534,0.00009419454,0.00085234904],"category_scores_gemma":[0.0005275278,0.00010332496,0.00007145788,0.00038969796,0.0000399495,0.00042036004,0.00001510059,0.00017135528,0.000037693157],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033461394,0.00021774824,0.11128818,0.000004009476,0.0000075958333,9.991484e-7,0.00050117326,0.0009340271,0.8736465,0.000012223044,0.00043891947,0.012915147],"study_design_scores_gemma":[0.0016829695,0.00021057994,0.7297363,0.000045469536,0.000074303505,0.000015065788,0.00013167916,0.014913931,0.25117758,0.00161089,0.0002359567,0.00016526562],"about_ca_topic_score_codex":0.000016713315,"about_ca_topic_score_gemma":0.00007733597,"teacher_disagreement_score":0.62246895,"about_ca_system_score_codex":0.0003545652,"about_ca_system_score_gemma":0.00010045052,"threshold_uncertainty_score":0.9332624},"labels":[],"label_agreement":null},{"id":"W2008126526","doi":"10.1139/w03-005","title":"Reductive dechlorination of weathered Aroclor 1260 during anaerobic biotreatment of Arctic soils","year":2003,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bioremediation; Environmental chemistry; Biodegradation; Reductive dechlorination; Chemistry; Soil water; Biphenyl; Polychlorinated biphenyl; Soil contamination; Weathering; Chlorine; Contamination; Biotransformation; Organic chemistry; Geology; Ecology; Soil science; Biology","score_opus":0.009293973884019561,"score_gpt":0.19687986658644577,"score_spread":0.1875858927024262,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008126526","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987894,0.00017514062,0.000010610693,0.00012597082,0.0002802105,0.000099304925,0.00004362571,0.0000013125615,0.00047439654],"genre_scores_gemma":[0.99890554,0.000066885346,0.000836308,0.000030790678,0.00001574064,3.643192e-7,0.000004681761,0.000006465149,0.00013319636],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99909264,0.00009970258,0.00041601344,0.0001233991,0.00004523977,0.00022300861],"domain_scores_gemma":[0.9991875,0.000020913876,0.000442157,0.00010896304,0.00006116528,0.00017927478],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002194321,0.0001052834,0.00023370946,0.0001467856,0.000046226254,0.000003916267,0.00014929913,0.00009823207,0.001583702],"category_scores_gemma":[0.00007640209,0.00008931409,0.000087779765,0.00018816689,0.0002699607,0.000066891735,0.000009640757,0.00009000607,0.000027148164],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022405262,0.00003300011,0.015998678,0.000008573068,0.000039618477,0.000012072883,0.00037242367,0.00007461255,0.9827818,0.00003420787,0.00021344204,0.00040914325],"study_design_scores_gemma":[0.0006939528,0.0002486301,0.028456615,0.000038548857,0.000029636523,0.0002913455,0.000222816,5.563945e-7,0.96590215,0.00008799385,0.003921321,0.00010643083],"about_ca_topic_score_codex":0.0017408645,"about_ca_topic_score_gemma":0.008098772,"teacher_disagreement_score":0.016879668,"about_ca_system_score_codex":0.00041122263,"about_ca_system_score_gemma":0.00020856173,"threshold_uncertainty_score":0.999329},"labels":[],"label_agreement":null},{"id":"W2008255981","doi":"10.1074/jbc.m510456200","title":"Directed Evolution of a Ring-cleaving Dioxygenase for Polychlorinated Biphenyl Degradation","year":2005,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"Dioxygenase; Chemistry; Biphenyl; Cleave; Saturated mutagenesis; Enzyme; Stereochemistry; Polychlorinated biphenyl; Mutagenesis; Substrate (aquarium); Biochemistry; Mutant; Biology; Organic chemistry","score_opus":0.016632881078265962,"score_gpt":0.23098456674610615,"score_spread":0.21435168566784019,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008255981","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988447,0.00007442394,0.00041957587,0.00017768415,0.00004852436,0.000058517562,0.000014797509,0.000013683649,0.00034811063],"genre_scores_gemma":[0.99718255,0.000030476733,0.002495841,0.00002688205,0.00011446923,6.770211e-7,0.000007175199,0.0000031281206,0.00013881018],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999294,0.000016656944,0.00032878714,0.0001032409,0.0001302675,0.00012706326],"domain_scores_gemma":[0.99940556,0.00004537072,0.00037557096,0.000060793405,0.00003696951,0.000075721066],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002496434,0.000078421166,0.00014441481,0.00001384042,0.000034291876,0.0000065194026,0.00013793948,0.00011019215,0.0006711824],"category_scores_gemma":[0.00025783665,0.000054046322,0.000096625314,0.0001331647,0.00007409746,0.00008231301,0.000034148303,0.00008847315,0.000007220554],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011488089,0.00009177083,0.010605296,0.00000752491,0.000007818005,6.6268524e-7,0.000013299157,0.000033909015,0.9855904,0.0000019356542,0.00041208646,0.003120428],"study_design_scores_gemma":[0.00048141918,0.000089823174,0.036786083,0.000018350303,0.000008100969,0.000015540092,0.00003187971,0.00027305883,0.9594358,0.000032613476,0.0027472998,0.00007999645],"about_ca_topic_score_codex":0.000006185652,"about_ca_topic_score_gemma":0.0000025410518,"teacher_disagreement_score":0.026180789,"about_ca_system_score_codex":0.00019525188,"about_ca_system_score_gemma":0.000013453443,"threshold_uncertainty_score":0.7348977},"labels":[],"label_agreement":null},{"id":"W2008330292","doi":"10.1021/es703029s","title":"An Evaluation of Compound-Specific Isotope Analyses for Assessing the Biodegradation of MTBE at Port Hueneme, CA","year":2008,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Shell","keywords":"Biodegradation; Port (circuit theory); Environmental chemistry; Environmental science; Isotope analysis; Chemistry; Waste management; Biology; Ecology; Engineering; Organic chemistry","score_opus":0.05711740189368375,"score_gpt":0.32525846915337964,"score_spread":0.2681410672596959,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008330292","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981513,0.00007136184,0.00040578953,0.00020992075,0.00008114992,0.000468316,0.000032839933,0.000018905897,0.0005604132],"genre_scores_gemma":[0.9978654,0.000062077175,0.0019250447,0.000037584825,0.000008630945,0.0000132208825,0.000037648097,0.0000059730887,0.00004445564],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99817044,0.000053709442,0.00035182995,0.00038860753,0.00079140643,0.00024400478],"domain_scores_gemma":[0.9991676,0.000025294163,0.0003272708,0.0004146772,0.000016960033,0.000048176793],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010664562,0.00011986966,0.00016064195,0.00016201906,0.00048086376,0.000011119903,0.00056916784,0.00009020969,0.0012699298],"category_scores_gemma":[0.00003588942,0.00008781799,0.000048980557,0.00080305047,0.0038619118,0.0003836335,0.00018946799,0.00006409069,0.000042780768],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000052698338,0.00011381986,0.1102982,8.57481e-7,0.0000026379148,2.7554717e-7,0.000110222776,0.00030713616,0.88341564,0.000018500292,0.00014441367,0.005583039],"study_design_scores_gemma":[0.00026231632,0.00010526066,0.24973178,0.0000030003744,0.00001773628,0.000016429547,0.00045524762,0.0025382803,0.7451013,0.000088965724,0.001578858,0.00010082886],"about_ca_topic_score_codex":0.000052915813,"about_ca_topic_score_gemma":0.000034095956,"teacher_disagreement_score":0.13943358,"about_ca_system_score_codex":0.00047711216,"about_ca_system_score_gemma":0.000036440208,"threshold_uncertainty_score":0.999643},"labels":[],"label_agreement":null},{"id":"W2008384634","doi":"10.4236/aim.2012.23047","title":"Preliminary Characterizations of a Carbohydrate from the Concentrated Culture Filtrate from &amp;lt;i&amp;gt;Fusarium solani&amp;lt;/i&amp;gt; and Its Role in Benzo[a]Pyrene Solubilization","year":2012,"lang":"en","type":"article","venue":"Advances in Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Chemistry; Fusarium solani; Size-exclusion chromatography; Chromatography; Polysaccharide; Pyrene; Mannose; Galactose; Periodate; Carbohydrate; Biochemistry; Organic chemistry; Microbiology; Biology","score_opus":0.010717074098411845,"score_gpt":0.23246399119597821,"score_spread":0.22174691709756636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008384634","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98966455,0.0070749233,0.00023292127,0.00021172676,0.00049225107,0.00050112425,0.0016179782,0.000030606298,0.00017392967],"genre_scores_gemma":[0.9902605,0.0031343198,0.0012254948,0.0003802739,0.000094094474,0.00001857856,0.0046952376,0.000021387612,0.00017010755],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9978145,0.00038918492,0.00062481395,0.0005241333,0.00009939017,0.0005479893],"domain_scores_gemma":[0.9989517,0.00019756457,0.0003775099,0.00033525794,0.000037066795,0.00010093104],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00027356946,0.00031246842,0.00039298832,0.000055253477,0.00011871774,0.000025930025,0.00035750156,0.00031832594,0.0012635168],"category_scores_gemma":[0.00015194838,0.00024264157,0.00004934301,0.00047569198,0.00036041447,0.00053944247,0.00021333851,0.00024874942,0.00021384144],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000095868265,0.0001467149,0.10678996,0.0000066577836,0.00001511692,3.9541638e-7,0.003235332,0.00025255771,0.8887822,0.000018528457,0.00023157866,0.00042507576],"study_design_scores_gemma":[0.0029985432,0.0001959855,0.4114431,0.00024336393,0.00014460922,0.0000232117,0.00041270023,0.0003619973,0.25294918,0.0004935869,0.32934254,0.0013911636],"about_ca_topic_score_codex":0.000295847,"about_ca_topic_score_gemma":0.009096958,"teacher_disagreement_score":0.635833,"about_ca_system_score_codex":0.00010796804,"about_ca_system_score_gemma":0.000025197984,"threshold_uncertainty_score":0.99964947},"labels":[],"label_agreement":null},{"id":"W2008465666","doi":"10.1042/bj20021837","title":"Purification, cloning and sequencing of an enzyme mediating the reductive dechlorination of 2,4,6-trichlorophenol from Desulfitobacterium frappieri PCP-1","year":2003,"lang":"en","type":"article","venue":"Biochemical Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Corrinoid; Dehalogenase; Molecular mass; Biochemistry; Chemistry; Pentachlorophenol; Open reading frame; Enzyme; Cofactor; Peptide sequence; Chromatography; Methylation; DNA; Organic chemistry","score_opus":0.013512071041058138,"score_gpt":0.21896708750414198,"score_spread":0.20545501646308384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008465666","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990256,0.00011688153,0.00038682422,0.00009490823,0.00012447157,0.00008341306,0.00001478584,0.000005733008,0.0001474012],"genre_scores_gemma":[0.9921926,0.00007084505,0.0075939572,0.00003804193,0.000083600076,0.0000010593344,0.00000861839,0.000006333779,0.000004892573],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99893975,0.00010457545,0.0003788638,0.00016561031,0.00027349335,0.00013772403],"domain_scores_gemma":[0.9992483,0.00008064377,0.00039076305,0.00012679487,0.00005283305,0.00010065375],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049635995,0.00009316704,0.00012375841,0.000027867498,0.0001011273,0.000024843637,0.00016531146,0.00008164807,0.00021618797],"category_scores_gemma":[0.00041335024,0.000066699686,0.00003400469,0.00020100549,0.00020448263,0.00017988404,0.000036387333,0.00016097879,0.0000035548887],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016688688,0.00002647422,0.0046100323,0.000002223063,0.000008319655,5.7799497e-7,0.0008423426,0.00001113481,0.9929729,0.00002013745,0.000059742048,0.0014294098],"study_design_scores_gemma":[0.00022302,0.000034043464,0.023186736,0.000014366831,0.000012670341,0.00002168095,0.0006836178,0.00009862191,0.975157,0.00037476327,0.00011391367,0.00007954229],"about_ca_topic_score_codex":0.00005870245,"about_ca_topic_score_gemma":0.0000026548805,"teacher_disagreement_score":0.018576704,"about_ca_system_score_codex":0.0001051631,"about_ca_system_score_gemma":0.00003604395,"threshold_uncertainty_score":0.27199343},"labels":[],"label_agreement":null},{"id":"W2009450367","doi":"10.1007/s10295-004-0109-x","title":"The industrial sustainability of bioremediation processes","year":2004,"lang":"en","type":"review","venue":"Journal of Industrial Microbiology & Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Bioremediation; Sustainability; Biochemical engineering; Industrial microbiology; Industrial biotechnology; Environmental science; Biotechnology; Waste management; Chemistry; Environmental chemistry; Biology; Engineering; Contamination; Ecology; Fermentation; Food science","score_opus":0.03537048622441458,"score_gpt":0.27855439042904423,"score_spread":0.24318390420462965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009450367","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.006376706,0.9853808,0.000024543551,0.0025397262,0.00354589,0.0018012956,0.00024443155,0.000045800356,0.000040770705],"genre_scores_gemma":[0.0023716292,0.9969017,0.00007138491,0.000023794984,0.0005018091,0.000006580602,0.000045647572,0.000029924755,0.000047546826],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9957991,0.00050998555,0.0025017946,0.000423893,0.00019994148,0.00056528026],"domain_scores_gemma":[0.99391806,0.00056316995,0.004703801,0.00047954355,0.0002314739,0.0001039647],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0018270843,0.0004975928,0.0018389681,0.00035245373,0.00017986896,0.00002945075,0.0015569156,0.004185438,0.00021154617],"category_scores_gemma":[0.005038915,0.00029136395,0.00052523636,0.001505595,0.0021292313,0.000115697054,0.0004500262,0.0022059553,0.00005840958],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018136344,0.00024380004,0.00022695787,0.0006468475,0.00028595855,0.000022110782,0.000043814278,0.000007165127,0.006220961,0.000065271684,0.007801155,0.9842546],"study_design_scores_gemma":[0.0010500983,0.0006496287,0.0000017049316,0.0013038191,0.00036488828,0.00035813727,0.00007428048,4.7400373e-8,0.005691557,0.00016740308,0.99006724,0.00027121007],"about_ca_topic_score_codex":0.00005141418,"about_ca_topic_score_gemma":0.00008007849,"teacher_disagreement_score":0.9839834,"about_ca_system_score_codex":0.0013043083,"about_ca_system_score_gemma":0.0025384538,"threshold_uncertainty_score":0.99995387},"labels":[],"label_agreement":null},{"id":"W2009887518","doi":"10.1007/s10532-007-9133-7","title":"Aerobic MTBE biodegradation in the presence of BTEX by two consortia under batch and semi-batch conditions","year":2007,"lang":"en","type":"article","venue":"Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"U.S. Geological Survey; Suncor Energy Incorporated; University of Cincinnati; U.S. Environmental Protection Agency","keywords":"BTEX; Biodegradation; Ethylbenzene; Chemistry; Bioremediation; Microbial consortium; Environmental chemistry; Bioreactor; Benzene; Toluene; Chromatography; Organic chemistry; Contamination; Microorganism; Bacteria; Biology; Ecology","score_opus":0.010962724258994026,"score_gpt":0.25417742941811206,"score_spread":0.24321470515911803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009887518","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99631673,0.00007297031,0.00122083,0.0009256122,0.00008417611,0.00033924487,0.00008710984,0.000018538873,0.0009347585],"genre_scores_gemma":[0.99861175,0.00006828797,0.0003690304,0.0003870785,0.000012980944,0.0000044639455,0.0002888703,0.000005694867,0.00025184875],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99880123,0.000101063226,0.00034821528,0.00025455578,0.00029284536,0.00020210033],"domain_scores_gemma":[0.99941313,0.00016171535,0.00017187782,0.00018374284,0.000017724853,0.000051805928],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072228146,0.00012243427,0.00010933231,0.000056326244,0.000095598836,0.00003245039,0.00016585569,0.000069130016,0.00068184285],"category_scores_gemma":[0.000050496994,0.00009334777,0.000025359348,0.00044613925,0.00026177868,0.0002606257,0.000038747494,0.00009681163,0.00006369594],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026006506,0.00014163183,0.07167403,0.000008801296,0.0000060148427,0.0000010947625,0.0004758695,0.000018732613,0.90783507,0.00042965286,0.01574018,0.0036429337],"study_design_scores_gemma":[0.0013148376,0.00009797452,0.6652608,0.000031000785,0.000027934937,0.000015792319,0.001262986,0.0006436838,0.31993118,0.0005889889,0.010473496,0.000351318],"about_ca_topic_score_codex":0.0006707165,"about_ca_topic_score_gemma":0.0024016886,"teacher_disagreement_score":0.5935868,"about_ca_system_score_codex":0.00007027093,"about_ca_system_score_gemma":0.000013396368,"threshold_uncertainty_score":0.7465701},"labels":[],"label_agreement":null},{"id":"W2010178081","doi":"10.1007/s00253-005-0165-9","title":"Investigation on bioremediation of oil-polluted wetland at Liaodong Bay in northeast China","year":2005,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Key Research and Development Program of China","keywords":"Bioremediation; Bay; Wetland; China; Environmental science; Environmental chemistry; Water pollution; Ecology; Environmental engineering; Biology; Geography; Contamination; Geology; Chemistry; Oceanography; Archaeology","score_opus":0.0068478283255886075,"score_gpt":0.17723231453795027,"score_spread":0.17038448621236166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010178081","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99572784,0.000031455995,0.0000076083584,0.0031350623,0.000060599894,0.00013608795,0.00003700044,0.000044669392,0.0008196764],"genre_scores_gemma":[0.99863803,0.00015908961,0.0005012822,0.00046528073,0.00002062776,0.0000051748093,0.00009766999,0.0000071999593,0.000105616986],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990217,0.00003478991,0.00030143128,0.00035845028,0.000039906176,0.00024373384],"domain_scores_gemma":[0.9996076,0.000026875134,0.0001568416,0.00016471742,0.0000036421584,0.000040289287],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018425094,0.00015421865,0.00020581126,0.00014711027,0.00006508663,0.000003015446,0.0001385209,0.00054368156,0.00030211726],"category_scores_gemma":[0.000017753351,0.0001289608,0.000021615138,0.0002931343,0.0006335004,0.000035044333,0.0001437719,0.00018927736,0.00024386913],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000075299424,0.000037122856,0.040487938,0.000005032534,0.000005220515,6.185578e-7,0.00012218517,0.00001457694,0.94690496,0.00028258804,0.0002868075,0.01177768],"study_design_scores_gemma":[0.0008135552,0.00008586727,0.06320628,0.000008757881,0.000006015175,0.0000144864225,0.000020967436,0.00003551586,0.9279035,0.00006709468,0.007677958,0.00016004464],"about_ca_topic_score_codex":0.00003838082,"about_ca_topic_score_gemma":0.002458187,"teacher_disagreement_score":0.022718336,"about_ca_system_score_codex":0.00010050898,"about_ca_system_score_gemma":0.00000800885,"threshold_uncertainty_score":0.5258869},"labels":[],"label_agreement":null},{"id":"W2010425342","doi":"10.1002/bit.22618","title":"Enhanced degradation of phenanthrene in a solid–liquid two‐phase partitioning bioreactor via sonication","year":2009,"lang":"en","type":"article","venue":"Biotechnology and Bioengineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Sonication; Phenanthrene; Bioreactor; Degradation (telecommunications); Chromatography; Biodegradation; Chemistry; Environmental chemistry; Organic chemistry","score_opus":0.0073122506306299425,"score_gpt":0.24147033684697863,"score_spread":0.2341580862163487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010425342","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98813003,0.000059880258,0.0110209845,0.0005366794,0.0000393668,0.000103235456,0.0000057749676,0.000061696264,0.00004235246],"genre_scores_gemma":[0.9984661,0.00015062824,0.0013157956,0.000033620792,0.00000802472,0.0000017099841,0.000016953458,0.0000033069944,0.0000038617363],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994025,0.000008244606,0.00020430988,0.00017342978,0.00005709618,0.00015438556],"domain_scores_gemma":[0.9997622,0.0000070081223,0.00009304564,0.00010498555,0.000004502979,0.000028267526],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010010282,0.00008730008,0.00011140256,0.00008928588,0.000027773554,0.0000047781123,0.00007500882,0.00014406351,0.000059441354],"category_scores_gemma":[0.000024612566,0.00008018638,0.000016420026,0.00027077954,0.000087152526,0.000095156,0.000027929464,0.00008368528,0.000009997208],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027412216,0.00006303885,0.00022788688,0.0000027530623,0.0000023116952,5.5734785e-7,0.00006912704,0.0000862781,0.980547,0.000090270376,0.0000021361384,0.01888122],"study_design_scores_gemma":[0.00054288737,0.00018961226,0.004311218,0.000021173086,0.000005341452,0.000002303664,0.00003155113,0.0028235873,0.99191576,0.000025340316,0.000034460885,0.000096788135],"about_ca_topic_score_codex":0.000031845313,"about_ca_topic_score_gemma":0.00005472161,"teacher_disagreement_score":0.018784432,"about_ca_system_score_codex":0.000039651688,"about_ca_system_score_gemma":0.000003780902,"threshold_uncertainty_score":0.32699054},"labels":[],"label_agreement":null},{"id":"W2010437067","doi":"10.1016/j.jconhyd.2013.10.004","title":"Integration of stable carbon isotope, microbial community, dissolved hydrogen gas, and 2HH2O tracer data to assess bioaugmentation for chlorinated ethene degradation in fractured rocks","year":2013,"lang":"en","type":"article","venue":"Journal of Contaminant Hydrology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Environmental chemistry; Chemistry; Dissolved organic carbon; Bioaugmentation; Groundwater; Biodegradation; Microbial consortium; Isotopes of carbon; TRACER; Total organic carbon; Contamination; Geology; Bioremediation; Ecology; Organic chemistry; Microorganism","score_opus":0.05026560106225954,"score_gpt":0.2865467801703599,"score_spread":0.23628117910810037,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010437067","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967545,0.00004363013,0.0013237731,0.0010696342,0.00014550619,0.0005798916,0.000041292642,0.000003694185,0.00003804159],"genre_scores_gemma":[0.99854755,0.00006450802,0.0010066633,0.00018485241,0.000024107278,0.0000060715647,0.00010810007,0.000009219842,0.000048933754],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99867535,0.00022835187,0.00060880365,0.00015220446,0.00014667313,0.00018863131],"domain_scores_gemma":[0.9990029,0.00013534773,0.0005127989,0.00020159267,0.00006965626,0.00007770768],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009084272,0.00012787405,0.000307164,0.00013127946,0.000057129033,0.000023540617,0.0003146898,0.00013141539,0.00012893748],"category_scores_gemma":[0.00016310821,0.00010258078,0.00002955341,0.00017101219,0.00008105533,0.00042158918,0.00013130988,0.00021658179,0.0000035964597],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022923287,0.00014975842,0.018717708,0.000010208795,0.000016350898,9.218577e-7,0.000802089,0.00010877881,0.9739795,0.000002311799,0.0002470279,0.005736112],"study_design_scores_gemma":[0.002762066,0.0010312279,0.18371607,0.000067630965,0.00006753282,0.000033983953,0.0004850799,0.009560903,0.7998774,0.00015741428,0.0020232874,0.00021742393],"about_ca_topic_score_codex":0.003558807,"about_ca_topic_score_gemma":0.008161053,"teacher_disagreement_score":0.17410211,"about_ca_system_score_codex":0.00011033769,"about_ca_system_score_gemma":0.000026744467,"threshold_uncertainty_score":0.53798753},"labels":[],"label_agreement":null},{"id":"W2011022278","doi":"10.1021/es062194+","title":"Continuous Catalytic Hydrogenation of Polyaromatic Hydrocarbon Compounds in Hydrogen−Supercritical Carbon Dioxide","year":2007,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Chrysene; Phenanthrene; Chemistry; Anthracene; Pyrene; Hydrocarbon; Phenanthrenes; Polycyclic aromatic hydrocarbon; Catalysis; Organic chemistry; Nuclear chemistry","score_opus":0.0043991088929685425,"score_gpt":0.2068052337630962,"score_spread":0.20240612487012766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011022278","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99387616,0.000052203806,0.000023017672,0.00025385735,0.00008848933,0.00029777776,0.000006106957,0.00006061787,0.005341798],"genre_scores_gemma":[0.99955547,0.000015138867,0.00026170476,0.00009166174,0.000009698096,0.0000043986324,0.0000066008506,0.000012852481,0.000042451386],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99751323,0.000024727306,0.00056176074,0.00055243383,0.0006544792,0.0006933445],"domain_scores_gemma":[0.99935395,0.00003724287,0.000081205726,0.00037439886,0.0000028570303,0.00015032373],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00095272734,0.00020417033,0.00027329862,0.0005095413,0.00009600733,0.000009178132,0.0006360238,0.00019700843,0.00018742829],"category_scores_gemma":[0.00008409949,0.00019871049,0.00004775658,0.0015362032,0.0032302341,0.00021003452,0.00039196247,0.00021425357,0.00014394679],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000084596995,0.00016523601,0.21999955,0.0000020952182,0.0000018502116,0.000014866878,0.00012792891,0.000016903912,0.7782931,0.00006280611,0.0000025830373,0.0013046333],"study_design_scores_gemma":[0.00038427755,0.00012673567,0.11624297,0.000012380533,0.000007826192,0.000050523053,0.00036405833,0.00063835736,0.88152134,0.0003070861,0.00013354556,0.00021091857],"about_ca_topic_score_codex":0.0002749752,"about_ca_topic_score_gemma":0.00030409693,"teacher_disagreement_score":0.103756584,"about_ca_system_score_codex":0.00085674686,"about_ca_system_score_gemma":0.000021306243,"threshold_uncertainty_score":0.9994824},"labels":[],"label_agreement":null},{"id":"W2011162409","doi":"10.1111/j.1574-6968.2001.tb10686.x","title":"Effects of 2,2â²,5,5â²-tetrachlorobiphenyl and biphenyl on cell membranes of<i>Ralstonia eutropha</i>H850","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Korea Science and Engineering Foundation","keywords":"Membrane; Biphenyl; Fructose; Chemistry; Fluorescence anisotropy; Ralstonia; Cell membrane; Biophysics; Biochemistry; Fatty acid; Cytoplasm; Cell; Polarization (electrochemistry); Biology; Organic chemistry; Enzyme","score_opus":0.003278981506312186,"score_gpt":0.1737203281912086,"score_spread":0.17044134668489644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011162409","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978618,0.00021663061,0.000018938286,0.00058169104,0.0003099469,0.00030063002,0.00003668978,0.000027170967,0.0006464723],"genre_scores_gemma":[0.99649036,0.00026093374,0.00039424404,0.0025780033,0.000035443823,0.0000030661975,0.000024821202,0.000017149769,0.00019599531],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986849,0.00011466512,0.00035658586,0.00040568563,0.00008334793,0.00035481757],"domain_scores_gemma":[0.99929076,0.00015278476,0.00024413427,0.00022129556,0.000009100709,0.000081907034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015961032,0.00024149302,0.0003562583,0.000082166516,0.00006103419,0.0000075929256,0.0002489321,0.00016419168,0.00049197144],"category_scores_gemma":[0.000022301763,0.00020154688,0.00009358021,0.00021537811,0.0006102426,0.000071493356,0.00011173816,0.00015204951,0.00020159493],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000929828,0.00013677914,0.018046448,0.00005748167,0.000018709228,0.000015014443,0.00022538824,0.00004826779,0.9774904,0.0000031538038,0.0032887084,0.0005766286],"study_design_scores_gemma":[0.001011287,0.00019356875,0.032637574,0.000028420787,0.000028780903,0.000029283654,0.000017218767,0.0000043918785,0.9556761,0.000004397615,0.010141692,0.00022731595],"about_ca_topic_score_codex":0.00014185015,"about_ca_topic_score_gemma":0.000024129944,"teacher_disagreement_score":0.021814369,"about_ca_system_score_codex":0.000047049358,"about_ca_system_score_gemma":0.0000066562084,"threshold_uncertainty_score":0.8218843},"labels":[],"label_agreement":null},{"id":"W2011212000","doi":"10.1016/s0025-326x(02)00118-2","title":"The dose-response relationship between No. 2 fuel oil and the growth of the salt marsh grass, Spartina alterniflora","year":2002,"lang":"en","type":"article","venue":"Marine Pollution Bulletin","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":96,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Bedford Institute of Oceanography; Fisheries and Oceans Canada","funders":"U.S. Environmental Protection Agency","keywords":"Spartina alterniflora; Biomass (ecology); Environmental science; Agronomy; Salt marsh; Dry weight; Animal science; Wetland; Marsh; Biology; Ecology","score_opus":0.01322591754659847,"score_gpt":0.19820871986301966,"score_spread":0.1849828023164212,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011212000","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8730994,0.00008014224,0.0000070921556,0.111484684,0.0002270473,0.000195302,0.000033423847,0.000028877304,0.014844074],"genre_scores_gemma":[0.9815945,0.00013155173,0.00006221884,0.0005943871,0.00007063367,0.000006260922,0.0000031185066,0.0000083103805,0.01752904],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99846,0.00053228263,0.00031329418,0.00018343423,0.0002977385,0.00021328309],"domain_scores_gemma":[0.998925,0.00049831934,0.0002050094,0.00029535335,0.000018957764,0.00005739229],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0012205513,0.00012369169,0.000116638876,0.000016098491,0.00039450952,0.000044688495,0.0003105164,0.000060909646,0.0019948762],"category_scores_gemma":[0.00097271765,0.00006079707,0.00007140224,0.00021411682,0.00072778953,0.000032655647,0.00038397912,0.00017612982,0.0012182244],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005693216,0.00006360619,0.9093064,0.000016776266,0.000018604978,9.869697e-7,0.0003113085,0.000008958304,0.0032078258,0.0013384414,0.078622304,0.0065354574],"study_design_scores_gemma":[0.0007604257,0.000021062579,0.86041164,0.000005913369,0.000016441292,0.0000033932029,0.000012799353,0.00006372399,0.00039472803,0.00041298426,0.13781439,0.00008251725],"about_ca_topic_score_codex":0.00042274105,"about_ca_topic_score_gemma":0.00018533405,"teacher_disagreement_score":0.11089029,"about_ca_system_score_codex":0.000057597492,"about_ca_system_score_gemma":0.0000056590216,"threshold_uncertainty_score":0.99955946},"labels":[],"label_agreement":null},{"id":"W2011432833","doi":"10.1081/ese-100104869","title":"PCB BIODEGRADATION IN AGED CONTAMINATED SOIL: INTERACTIONS BETWEEN EXOGENOUS<i>PHANEROCHAETE CHRYSOSPORIUM</i>AND INDIGENOUS MICROORGANISMS","year":2001,"lang":"en","type":"article","venue":"Journal of Environmental Science and Health Part A","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Consejo Nacional de Ciencia y Tecnología; University of Alberta","keywords":"Phanerochaete; Chrysosporium; Microorganism; Biodegradation; Microcosm; Chemistry; Fungus; Environmental chemistry; Bagasse; Incubation; Food science; Soil contamination; Soil microbiology; Bioremediation; Contamination; Soil water; Botany; Biology; Bacteria; Ecology; Organic chemistry; Biochemistry; Enzyme","score_opus":0.021999994381546664,"score_gpt":0.266232313378149,"score_spread":0.24423231899660236,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011432833","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980317,0.00016480725,0.00002315556,0.0013435029,0.00013849355,0.00020710855,0.000015047669,0.0000051004877,0.000071089984],"genre_scores_gemma":[0.9967744,0.0019088883,0.00018548148,0.0009657006,0.000057661982,9.555104e-7,0.0000056840713,0.000006413079,0.000094845855],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983672,0.00005518845,0.00052507786,0.00024070671,0.00044214138,0.00036967578],"domain_scores_gemma":[0.99918187,0.000025014897,0.00038781328,0.00008769574,0.0000072570706,0.00031037792],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014671392,0.000129732,0.0002242715,0.00014175309,0.00035863783,0.00004667725,0.00017316078,0.000047671805,0.00034087137],"category_scores_gemma":[0.000018141309,0.000109480665,0.000022974216,0.00035761058,0.00047759907,0.00056442217,0.00010764319,0.0002151568,0.000037843292],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020525928,0.000115103554,0.5329845,0.000004693796,0.00000393102,0.000015489455,0.00309765,0.000004619279,0.44850937,5.762218e-7,0.00022104222,0.015022509],"study_design_scores_gemma":[0.00062336965,0.0003314721,0.9773625,0.000031162577,0.00000781014,0.00017072257,0.0006278928,0.000012410156,0.014290034,0.000016089713,0.0063935197,0.00013299062],"about_ca_topic_score_codex":0.00025072898,"about_ca_topic_score_gemma":0.0007950734,"teacher_disagreement_score":0.44437805,"about_ca_system_score_codex":0.0006192772,"about_ca_system_score_gemma":0.00007730905,"threshold_uncertainty_score":0.4464492},"labels":[],"label_agreement":null},{"id":"W2012068153","doi":"10.1016/j.jcis.2009.12.043","title":"A modified microbial adhesion to hydrocarbons assay to account for the presence of hydrocarbon droplets","year":2009,"lang":"en","type":"article","venue":"Journal of Colloid and Interface Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":63,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Hydrocarbon; Absorbance; Hexadecane; Chemistry; Toluene; Adhesion; Aqueous solution; Suspension (topology); Chromatography; Chemical engineering; Organic chemistry","score_opus":0.010907092904153166,"score_gpt":0.258204679426093,"score_spread":0.2472975865219398,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012068153","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992162,0.000043494336,0.0031746305,0.0033985318,0.00033086547,0.00038868084,0.000006449416,0.0000039249235,0.0004914112],"genre_scores_gemma":[0.99742216,0.000027571696,0.0014367859,0.00087288604,0.00004113796,0.0000012009535,6.417111e-8,0.0000034456707,0.00019472184],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99864227,0.00002756825,0.00037949046,0.00021194288,0.00048524127,0.00025349128],"domain_scores_gemma":[0.9992286,0.000104712824,0.00023808722,0.00015977443,0.000060506176,0.00020830263],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014057102,0.00011164072,0.00018272686,0.00010159454,0.00015676132,0.0000818137,0.00067326333,0.00003701779,0.00003144897],"category_scores_gemma":[0.00044859955,0.00006957006,0.000060223345,0.00058652065,0.00023124968,0.00028374355,0.00014053537,0.000079832214,0.000009807005],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015947822,0.00004439709,0.00017894842,0.0000016453548,0.0000024890705,1.7274577e-7,0.00068848254,0.00097627693,0.9930918,0.000013768622,0.002915246,0.0019272753],"study_design_scores_gemma":[0.00036282375,0.0010766549,0.008158527,0.00006747373,0.000013754748,0.000020859878,0.00014749293,0.0031307433,0.9820367,0.000098285236,0.0047604167,0.00012626112],"about_ca_topic_score_codex":0.00002833825,"about_ca_topic_score_gemma":0.00003228656,"teacher_disagreement_score":0.011055113,"about_ca_system_score_codex":0.00010824033,"about_ca_system_score_gemma":0.00007240384,"threshold_uncertainty_score":0.28369847},"labels":[],"label_agreement":null},{"id":"W2012947306","doi":"10.1002/em.20473","title":"Mutagenicity of an aged gasworks soil during bioslurry treatment","year":2009,"lang":"en","type":"article","venue":"Environmental and Molecular Mutagenesis","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University; Health Canada","funders":"","keywords":"Chemistry; Environmental chemistry; Environmental remediation; Salmonella; Mutagen; Ames test; Contamination; S9 fraction; Soil contamination; Carcinogen; Organic chemistry; Bacteria; Enzyme; Biology; Microsome","score_opus":0.003427951260284072,"score_gpt":0.18142162384763472,"score_spread":0.17799367258735063,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012947306","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991374,0.00013391857,0.000029568415,0.00007095558,0.000029689298,0.00018745726,0.000036105583,0.000023990477,0.00035094115],"genre_scores_gemma":[0.9987573,0.00022843755,0.00049107784,0.00024640645,0.000014475694,0.0000026785128,0.000040180286,0.000011777361,0.0002076713],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99892,0.00006276774,0.00021338198,0.00036846643,0.00020292602,0.0002324421],"domain_scores_gemma":[0.9995025,0.0000052885903,0.00008436389,0.0002352357,6.901255e-7,0.0001719429],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00006894982,0.00020118657,0.00017725966,0.000030166815,0.00010767232,0.000014419529,0.00011101481,0.000087006134,0.0011835063],"category_scores_gemma":[0.0000025887978,0.00017539301,0.00008396982,0.00006550647,0.00016036698,0.0001120608,0.000067325105,0.000044699376,0.000089295274],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004036655,0.00029514486,0.0074591683,0.0000024812816,0.000013173097,0.000041363946,0.00021485276,0.00009851913,0.97868013,0.0000014055627,0.000007183682,0.013146219],"study_design_scores_gemma":[0.00050198386,0.00022362477,0.332927,0.0000028515515,0.00002440875,0.000013455137,0.000057517245,0.000042729538,0.6658793,0.000013950695,0.00016168109,0.00015148826],"about_ca_topic_score_codex":0.000058835474,"about_ca_topic_score_gemma":0.000026192127,"teacher_disagreement_score":0.32546782,"about_ca_system_score_codex":0.00011314598,"about_ca_system_score_gemma":0.0000032761798,"threshold_uncertainty_score":0.9997296},"labels":[],"label_agreement":null},{"id":"W2013188904","doi":"10.1016/j.mimet.2011.12.005","title":"Quantitative real-time PCR (qPCR) detection chemistries affect enumeration of the Dehalococcoides 16S rRNA gene in groundwater","year":2011,"lang":"en","type":"article","venue":"Journal of Microbiological Methods","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Strategic Environmental Research and Development Program; University of Toronto","keywords":"Amplicon; Melting curve analysis; Dehalococcoides; TaqMan; Molecular biology; SYBR Green I; 16S ribosomal RNA; Real-time polymerase chain reaction; Biomarker; Biology; Detection limit; Primer (cosmetics); Ribosomal RNA; Polymerase chain reaction; Gene; Chemistry; Microbiology; Chromatography; Genetics","score_opus":0.04582219723019299,"score_gpt":0.30131306975363803,"score_spread":0.25549087252344505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013188904","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996638,0.00004208757,0.0025523528,0.000052469702,0.00016415588,0.00013378622,0.0000051559127,0.0000051856236,0.00040680182],"genre_scores_gemma":[0.9193126,0.00010492727,0.08044357,0.00004825137,0.000021526523,9.845191e-7,0.0000012137735,0.0000045468028,0.00006240578],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982808,0.00078008365,0.00054211676,0.00014541973,0.000093939496,0.00015762093],"domain_scores_gemma":[0.99910533,0.00016019089,0.0005473503,0.00010740836,0.000037155412,0.000042587075],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0019004557,0.00012395828,0.00026512303,0.00003736168,0.00005285451,0.000011056123,0.00024507698,0.00014400673,0.0009456383],"category_scores_gemma":[0.0003935983,0.0000666987,0.00014058233,0.00023112433,0.0002643737,0.00012489076,0.0000916531,0.00019454895,0.000023404515],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017042788,0.000099727506,0.010482547,0.0000035200853,0.000012703069,0.0000019597069,0.00032133335,0.000008889055,0.9844231,0.000003030184,0.000059764,0.004412972],"study_design_scores_gemma":[0.00023542657,0.0003169261,0.1300952,0.000016059379,0.000014637612,0.000037598147,0.000051170326,0.000014902568,0.8687796,0.00019206267,0.00016914062,0.00007725475],"about_ca_topic_score_codex":0.00009733717,"about_ca_topic_score_gemma":0.00003860681,"teacher_disagreement_score":0.11961264,"about_ca_system_score_codex":0.000118987045,"about_ca_system_score_gemma":0.000013562836,"threshold_uncertainty_score":0.99996763},"labels":[],"label_agreement":null},{"id":"W2014291340","doi":"10.1002/rem.20161","title":"Stimulation of aerobic degradation of chlorinated ethenes in soil by microbial inoculation","year":2008,"lang":"en","type":"article","venue":"Remediation Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Conestoga College","funders":"","keywords":"Microcosm; Biodegradation; Environmental chemistry; Nutrient; Reductive dechlorination; Chemistry; Trichloroethylene; Bioaugmentation; Degradation (telecommunications); Cometabolism; Bioremediation; Microorganism; Contamination; Amendment; Soil contamination; Soil water; Environmental engineering; Ecology; Environmental science; Bacteria; Biology; Organic chemistry","score_opus":0.01428236623317151,"score_gpt":0.21812434609263961,"score_spread":0.20384197985946811,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014291340","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99863726,0.000027805325,0.0007657749,0.00011845904,0.000185986,0.00012403051,0.000007329219,0.000007632994,0.00012571002],"genre_scores_gemma":[0.99893934,0.00019424403,0.00062955386,0.000026302949,0.000038502916,6.372938e-7,0.000067647656,0.000006839051,0.00009692087],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986921,0.00009903049,0.0006013799,0.000120993274,0.00035660877,0.00012988113],"domain_scores_gemma":[0.9992158,0.00003746443,0.00055229664,0.00007860991,0.000060718943,0.000055107557],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041699727,0.00009139337,0.00015265793,0.00012701156,0.000059954666,0.0000064942865,0.000098251905,0.00009668933,0.00064369314],"category_scores_gemma":[0.00012259932,0.00008571078,0.00004786942,0.00041268664,0.00008569708,0.00034129852,0.000020597496,0.00011987708,0.00002896714],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041781088,0.00007394731,0.22103389,0.0000043601635,0.0000034725856,7.0610884e-7,0.0003579013,0.0039053422,0.77229524,0.000002904036,0.0007896071,0.001490878],"study_design_scores_gemma":[0.0011764608,0.00006967155,0.48990744,0.000022143795,0.0000074761115,0.000020844522,0.000034867677,0.002891771,0.50540334,0.000042339867,0.0003111001,0.000112510905],"about_ca_topic_score_codex":0.00008597518,"about_ca_topic_score_gemma":0.00007588096,"teacher_disagreement_score":0.26887357,"about_ca_system_score_codex":0.0001535288,"about_ca_system_score_gemma":0.00003764287,"threshold_uncertainty_score":0.7047989},"labels":[],"label_agreement":null},{"id":"W2014933846","doi":"10.1897/02-325","title":"The use of toxicity bioassays to monitor the recovery of oiled wetland sediments","year":2003,"lang":"en","type":"article","venue":"Environmental Toxicology and Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Bedford Institute of Oceanography; Environment and Climate Change Canada; Fisheries and Oceans Canada","funders":"","keywords":"Bioassay; Environmental chemistry; Toxicity; Luminescent bacteria; Biostimulation; Chemistry; Acute toxicity; Contamination; Bioremediation; Biology; Ecology","score_opus":0.010623073992506078,"score_gpt":0.2000805725984559,"score_spread":0.18945749860594982,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014933846","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985296,0.000050535164,0.000005929978,0.00018420568,0.00008076041,0.00013264333,0.00004937747,0.0000033540666,0.000963564],"genre_scores_gemma":[0.99804795,0.00022852358,0.00014198484,0.00020621145,0.000011393734,0.0000049333585,0.0000044775343,0.0000048863503,0.0013496517],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999261,0.000060438313,0.00020598658,0.0001742681,0.00013637933,0.00016192073],"domain_scores_gemma":[0.99949604,0.00012902667,0.00011228082,0.00019285645,0.0000011848308,0.00006862886],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017496831,0.00010271466,0.00010927236,0.000004304342,0.00013280292,0.000008524459,0.00013927308,0.00010100112,0.0017575105],"category_scores_gemma":[0.000054058848,0.000063536616,0.000038426166,0.000052829513,0.00051164074,0.000045580087,0.00012224457,0.00008727052,0.00003149207],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039168088,0.00009049579,0.042260032,0.0000033907193,0.0000148244235,6.6121373e-7,0.00004592249,0.000032775562,0.9547135,0.0000015694828,0.0015781275,0.0012195243],"study_design_scores_gemma":[0.0002123462,0.000056161556,0.038314823,0.0000033245658,0.000010641609,0.000005962177,0.00008541527,0.000007600386,0.94178444,0.000017867225,0.019426059,0.00007533365],"about_ca_topic_score_codex":0.000009425504,"about_ca_topic_score_gemma":0.000010171811,"teacher_disagreement_score":0.017847931,"about_ca_system_score_codex":0.00005655952,"about_ca_system_score_gemma":0.0000041795834,"threshold_uncertainty_score":0.99915504},"labels":[],"label_agreement":null},{"id":"W2015168355","doi":"10.1139/v02-098","title":"Enzymatic oxidation of cyclopropylbenzene: structures of new metabolites and possible mechanistic implications","year":2002,"lang":"en","type":"article","venue":"Canadian Journal of Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Chemistry; Dioxygenase; Catechol; Enzyme; Stereochemistry; Dehydrogenase; Diol; Toluene; Fermentation; Organic chemistry","score_opus":0.011417772832648521,"score_gpt":0.1942107923083351,"score_spread":0.18279301947568657,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015168355","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979543,0.00034137614,0.00006413453,0.00025176373,0.000027535709,0.00003317666,0.000025415355,0.0000011209733,0.0013011924],"genre_scores_gemma":[0.9984546,0.000049528273,0.0011953005,0.000033085755,0.000023681894,1.1042705e-7,0.0000025357292,0.000003634237,0.0002375532],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99946725,0.000007767055,0.00027114924,0.0000628569,0.00009617336,0.00009481501],"domain_scores_gemma":[0.9993235,0.000013867527,0.00027707338,0.00008903938,0.000029635652,0.00026690765],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007006608,0.000059704085,0.0001231085,0.00002723772,0.000030189985,0.0000113358665,0.00012749885,0.000047389694,0.0042404183],"category_scores_gemma":[0.000101070706,0.00005205563,0.000031078205,0.00011697578,0.00007812012,0.00007022612,0.00000872606,0.000054743046,0.0000033301537],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000001308208,0.000004793732,0.0057479125,0.00002037509,0.000008538774,7.1935096e-7,0.0001903031,0.000009311783,0.99080044,0.00003260945,0.0015293348,0.0016543571],"study_design_scores_gemma":[0.00016068594,0.000012530977,0.034322996,0.000016679583,0.000022649096,0.00004203026,0.00006173524,0.000016688422,0.96324146,0.0013268864,0.00071771257,0.000057938516],"about_ca_topic_score_codex":0.00059546175,"about_ca_topic_score_gemma":0.00044882385,"teacher_disagreement_score":0.028575083,"about_ca_system_score_codex":0.00004169671,"about_ca_system_score_gemma":0.000079884005,"threshold_uncertainty_score":0.9966698},"labels":[],"label_agreement":null},{"id":"W2015363824","doi":"10.1186/1471-2091-9-11","title":"A new classification system for bacterial Rieske non-heme iron aromatic ring-hydroxylating oxygenases","year":2008,"lang":"en","type":"article","venue":"BMC Biochemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":155,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Norfolk General Hospital","funders":"Oak Ridge Institute for Science and Education; U.S. Department of Energy","keywords":"Oxygenase; Enzyme; Classification scheme; Reductase; Heme; Biology; Phylogenetic tree; Ring (chemistry); Ferredoxin; Heme oxygenase; Biochemistry; Stereochemistry; Gene; Chemistry; Computer science; Machine learning","score_opus":0.02080862953751931,"score_gpt":0.22015429025609595,"score_spread":0.19934566071857665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015363824","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99533504,0.000010136582,0.0013372729,0.00004025103,0.00020533161,0.000276234,0.00003409104,0.00008191058,0.0026797338],"genre_scores_gemma":[0.9885574,0.000003351504,0.009668688,0.000025793197,0.00029351242,0.000014032107,0.00011657629,0.000015536947,0.0013051069],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989079,0.000013179614,0.00030591353,0.00034097562,0.00018908069,0.00024294335],"domain_scores_gemma":[0.99936116,0.000039993156,0.00019136575,0.00025778433,0.0000071496906,0.00014253646],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011005271,0.00016227074,0.00014684969,0.000009827574,0.0001759395,0.000030405274,0.0001964733,0.00013876581,0.00043782225],"category_scores_gemma":[0.00008049038,0.00015320306,0.00007734031,0.00011287457,0.0000761053,0.0000819442,0.00006342072,0.000055266843,0.0002621404],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003056085,0.00002377184,0.008232787,0.000110212466,0.0000034180905,6.0548945e-7,0.00008629438,0.000008042753,0.9868253,0.0000016587369,0.0044658715,0.00021146223],"study_design_scores_gemma":[0.0006942595,0.000024389326,0.01898357,0.000049423496,0.000013387694,0.000022741831,0.00015498578,0.0013992959,0.9775209,0.0000047957938,0.00089406106,0.00023821527],"about_ca_topic_score_codex":0.000059697406,"about_ca_topic_score_gemma":0.000016167505,"teacher_disagreement_score":0.010750784,"about_ca_system_score_codex":0.00021760125,"about_ca_system_score_gemma":0.00006283171,"threshold_uncertainty_score":0.62474394},"labels":[],"label_agreement":null},{"id":"W2015464921","doi":"10.1016/j.jconhyd.2007.07.001","title":"Quantification of biotransformation of chlorinated hydrocarbons in a biostimulation study: Added value via stable carbon isotope analysis","year":2007,"lang":"en","type":"article","venue":"Journal of Contaminant Hydrology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Reductive dechlorination; Chemistry; Biostimulation; Biotransformation; Vinyl chloride; Environmental chemistry; Trichloroethylene; Biodegradation; Dehalococcoides; Bioremediation; Halocarbon; Organic chemistry; Contamination","score_opus":0.00906709675044786,"score_gpt":0.24565439948760992,"score_spread":0.23658730273716205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015464921","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99439895,0.000026384234,0.0048060887,0.00009005008,0.0001162296,0.00028129015,0.000003850967,0.0000035990722,0.00027356672],"genre_scores_gemma":[0.9997742,0.000026946462,0.00014585089,0.00001910373,0.000010649885,5.799188e-7,0.000008247815,0.0000049570426,0.00000945479],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.997995,0.000150748,0.0012201567,0.00013453893,0.00031276204,0.00018675883],"domain_scores_gemma":[0.9985938,0.00009426588,0.0010717678,0.00014342746,0.000042958174,0.00005377636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019331924,0.000110546054,0.00044789593,0.0005706593,0.000021194492,0.000003787549,0.00016274498,0.000121256046,0.00007376344],"category_scores_gemma":[0.00006430354,0.000093244904,0.00010295671,0.0012119481,0.00008946273,0.00016987966,0.000021243464,0.00012890871,0.000002866508],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034779703,0.00038032257,0.3764627,0.000005080583,0.000083398045,0.0000062631457,0.00089230423,0.0039391294,0.61678994,0.0000081893995,0.0000020341665,0.0010828701],"study_design_scores_gemma":[0.0013317432,0.0007707965,0.77628464,0.000011229693,0.00023535719,0.0000074221384,0.00018109461,0.033790514,0.18721855,0.000034723216,0.0000434993,0.0000904703],"about_ca_topic_score_codex":0.0011115846,"about_ca_topic_score_gemma":0.0025793952,"teacher_disagreement_score":0.42957136,"about_ca_system_score_codex":0.00012263708,"about_ca_system_score_gemma":0.000024237426,"threshold_uncertainty_score":0.3802417},"labels":[],"label_agreement":null},{"id":"W2015726474","doi":"10.1002/jobm.200510006","title":"Isolation and characterization of a biphenyl-utilizing psychrotrophic bacterium,Hydrogenophaga taeniospiralis IA3-A, that cometabolize dichlorobiphenyls and polychlorinated biphenyl congeners in Aroclor 1221","year":2006,"lang":"en","type":"article","venue":"Journal of Basic Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Biphenyl; Chemistry; Cometabolism; Bacteria; Chlorine; Polychlorinated biphenyl; Environmental chemistry; Food science; Organic chemistry; Bioremediation; Biology","score_opus":0.008724024979419785,"score_gpt":0.20020350832056494,"score_spread":0.19147948334114515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015726474","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984289,0.0003569863,0.00010716911,0.00037332246,0.0003540125,0.00022597621,0.000075092845,0.000008680575,0.000069860434],"genre_scores_gemma":[0.99842477,0.0006292502,0.0005134197,0.00023448399,0.00007823856,0.0000014428068,0.000056335404,0.000016681364,0.00004536207],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983812,0.0001768408,0.0007494088,0.00028365856,0.00010958935,0.0002993152],"domain_scores_gemma":[0.9988107,0.0000438549,0.0008878062,0.00012908397,0.000039351165,0.00008920519],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048530826,0.00023044318,0.00049492955,0.0002408951,0.000058668164,0.00002784822,0.00015927677,0.00019840506,0.00037651072],"category_scores_gemma":[0.000020211028,0.000197708,0.00007323183,0.00035670324,0.0003297773,0.00032660787,0.00009140756,0.00018376723,0.000007260323],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014469065,0.00008076745,0.13145824,0.000017683655,0.000020077136,0.000006397199,0.00017677441,0.0000066718867,0.86649215,0.000011370913,0.00006399763,0.0015211665],"study_design_scores_gemma":[0.0027330262,0.00032332542,0.5524803,0.00007667837,0.00006243197,0.00028459576,0.00006885853,0.00013502603,0.43487936,0.000055482094,0.008563117,0.00033779576],"about_ca_topic_score_codex":0.00016843299,"about_ca_topic_score_gemma":0.00016980681,"teacher_disagreement_score":0.4316128,"about_ca_system_score_codex":0.00009215991,"about_ca_system_score_gemma":0.000026165868,"threshold_uncertainty_score":0.80622977},"labels":[],"label_agreement":null},{"id":"W2016403546","doi":"10.1139/w99-124","title":"Origin of<i>p</i>-cresol in the anaerobic degradation of trinitrotoluene","year":2000,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Trinitrotoluene; Metabolite; Chemistry; Biodegradation; Anaerobic exercise; Degradation (telecommunications); Environmental chemistry; p-Cresol; Microbial biodegradation; Chromatography; Organic chemistry; Bacteria; Biochemistry; Microorganism; Biology","score_opus":0.01223262848972108,"score_gpt":0.21050548340785685,"score_spread":0.19827285491813576,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016403546","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99851316,0.000106086736,0.000004026227,0.0003604586,0.000080038124,0.00009995908,0.000037240483,5.5945975e-7,0.0007984586],"genre_scores_gemma":[0.9991848,0.00004854824,0.00029109378,0.0003182459,0.000015788459,3.0311796e-7,0.0000076958095,0.000002998894,0.00013052255],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991705,0.00014165186,0.00040696372,0.000071863666,0.000041817042,0.00016722805],"domain_scores_gemma":[0.9995592,0.00003846873,0.00020763879,0.00009882368,0.000016859036,0.00007896084],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00042727188,0.000065964305,0.00016776228,0.00009579115,0.000023806955,0.000004032838,0.00030554945,0.00007141593,0.004346497],"category_scores_gemma":[0.000030382525,0.00004558728,0.000056458808,0.00024553254,0.00022047345,0.000052476626,0.000004900218,0.000117023636,0.00004215907],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004075159,0.00002839837,0.057013907,0.0000036998824,0.0000091513475,0.00001846099,0.00043381375,0.00011222231,0.9310909,0.000027236869,0.005551617,0.005669827],"study_design_scores_gemma":[0.00326251,0.00096553384,0.28363445,0.000102527374,0.00005779625,0.000953334,0.0005393273,0.000018370272,0.32026753,0.00022667207,0.38956463,0.00040731116],"about_ca_topic_score_codex":0.0053262264,"about_ca_topic_score_gemma":0.046936292,"teacher_disagreement_score":0.6108234,"about_ca_system_score_codex":0.000078289195,"about_ca_system_score_gemma":0.00014922784,"threshold_uncertainty_score":0.9965637},"labels":[],"label_agreement":null},{"id":"W2016425314","doi":"10.1002/jobm.201100268","title":"Characterization of a novel biosurfactant produced by <i>Staphylococcus</i> sp. strain 1E with potential application on hydrocarbon bioremediation","year":2011,"lang":"en","type":"article","venue":"Journal of Basic Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Agence Universitaire de la Francophonie","keywords":"Bioremediation; Phenanthrene; Strain (injury); Chemistry; Hydrocarbon; Microbiology; Bacteria; Rhamnolipid; Food science; Bacillus subtilis; Staphylococcus aureus; Pseudomonas aeruginosa; Biology; Organic chemistry","score_opus":0.008261476657600561,"score_gpt":0.18291635083728353,"score_spread":0.17465487417968295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016425314","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99678457,0.0000075306834,0.0021204685,0.00023915245,0.00018627041,0.00032668462,0.00022518424,0.000010463501,0.000099656216],"genre_scores_gemma":[0.9987982,0.000035128836,0.0006745891,0.00026626477,0.00006581223,0.0000020781035,0.00012537514,0.000015106996,0.000017469525],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986644,0.000071441726,0.0006214223,0.0002635941,0.00015964426,0.00021951982],"domain_scores_gemma":[0.9984754,0.000013898182,0.0011783494,0.00018233866,0.0000661408,0.000083916406],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003879749,0.000185456,0.0002847137,0.000100996665,0.0000404891,0.00000769553,0.0002347722,0.00014948839,0.0003053431],"category_scores_gemma":[0.000019684905,0.00013506072,0.00007429048,0.00025050424,0.00018703227,0.00014940444,0.000033357737,0.00016267419,0.000032325846],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036726176,0.00048257635,0.005318839,0.000008617458,0.000028687718,0.0000019361087,0.00022632534,0.000015142312,0.9923927,0.0000072673165,0.0002527799,0.00089786155],"study_design_scores_gemma":[0.0011148489,0.000792195,0.01741928,0.000022650669,0.00003270253,0.000035164863,0.000025331594,0.000057381083,0.9793207,0.000005637165,0.0010145772,0.00015951958],"about_ca_topic_score_codex":0.000045220007,"about_ca_topic_score_gemma":0.000017931981,"teacher_disagreement_score":0.013071993,"about_ca_system_score_codex":0.00009433882,"about_ca_system_score_gemma":0.000039555583,"threshold_uncertainty_score":0.55076164},"labels":[],"label_agreement":null},{"id":"W2016780206","doi":"10.1007/s10482-011-9658-y","title":"Compositions of microbial communities associated with oil and water in a mesothermic oil field","year":2011,"lang":"en","type":"article","venue":"Antonie van Leeuwenhoek","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":84,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Genome British Columbia; Suncor Energy Incorporated","keywords":"Biology; Pyrosequencing; Aqueous two-phase system; 16S ribosomal RNA; Food science; Genus; Microbiology; Biochemistry; Botany; Chemistry; Aqueous solution; Gene; Organic chemistry","score_opus":0.013694171450727263,"score_gpt":0.19275832280984512,"score_spread":0.17906415135911785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016780206","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9800436,0.000011433975,0.0000029623454,0.00017458625,0.000026701116,0.00002210329,0.000026343334,0.000016645316,0.019675644],"genre_scores_gemma":[0.9983791,0.00007384438,0.00022732961,0.0004146447,0.0000037972677,0.0000018965723,0.000025223368,0.000008651447,0.00086548645],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999356,0.00007026573,0.0001786363,0.000111558555,0.00008863607,0.00019493279],"domain_scores_gemma":[0.9997237,0.000037591257,0.000060140155,0.0001278382,0.000009302777,0.000041458825],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013004642,0.00010468018,0.00014624135,0.00004345229,0.000065963766,0.00001084699,0.00012839667,0.000062507526,0.0028721162],"category_scores_gemma":[0.0000054168677,0.00007409699,0.000022305756,0.00009799792,0.00023546642,0.000109843684,0.00007492739,0.000102267855,0.00005782764],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000115076706,0.0003640141,0.14356823,0.000018709217,0.000033385753,0.000013081776,0.017470479,0.0000062006657,0.83056617,0.000020891051,0.0004385244,0.007385263],"study_design_scores_gemma":[0.003050293,0.0006267943,0.22164112,0.00028073124,0.00005532993,0.000030283762,0.0021905033,0.00012475475,0.7689675,0.00012745062,0.0022358617,0.00066936563],"about_ca_topic_score_codex":0.0025235552,"about_ca_topic_score_gemma":0.00872938,"teacher_disagreement_score":0.0780729,"about_ca_system_score_codex":0.000031604,"about_ca_system_score_gemma":0.000006944836,"threshold_uncertainty_score":0.99803936},"labels":[],"label_agreement":null},{"id":"W2017621516","doi":"10.2166/wst.2007.292","title":"Ultrastructure of a bio-electrolytic methanogenic/methanotrophic granular biofilm for the complete degradation of tetrachloroethylene in contaminated groundwater","year":2007,"lang":"en","type":"article","venue":"Water Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Environmental chemistry; Methanogenesis; Chemistry; Tetrachloroethylene; Reductive dechlorination; Biodegradation; Effluent; Electron donor; Bioreactor; Aeration; Methanobacterium; Methane; Environmental engineering; Environmental science; Trichloroethylene; Catalysis; Archaea","score_opus":0.010170241455503241,"score_gpt":0.2303331199422933,"score_spread":0.22016287848679006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017621516","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98918283,0.000038399976,0.009484617,0.00062848197,0.00011813744,0.00048090742,0.000011972157,0.000026767624,0.000027903447],"genre_scores_gemma":[0.99759096,0.000015361145,0.0022750986,0.00005849609,0.000005203266,0.000007137129,0.000008612029,0.000007082642,0.000032020496],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983402,0.000024676463,0.0004432119,0.00035716928,0.00029994248,0.00053481216],"domain_scores_gemma":[0.99937266,0.00006243747,0.00015264557,0.0003189546,0.000055338685,0.000037939404],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014566359,0.00014130169,0.00022405983,0.00047966363,0.00011065306,0.0000109615385,0.00077032344,0.0001624639,0.0001198103],"category_scores_gemma":[0.00009555474,0.000080262726,0.000054196462,0.0017479537,0.0020168186,0.0001526268,0.00013183066,0.0001467716,0.000012219627],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044385448,0.00003997696,0.018222064,0.0000063915513,0.0000036438528,0.0000010298438,0.00019533532,0.00002284684,0.9750848,0.00010701381,0.0000025110355,0.0062700114],"study_design_scores_gemma":[0.0004426068,0.00022773341,0.037740104,0.0000062284357,0.000013549459,0.000012267837,0.00012621314,0.00036398508,0.96015185,0.0005878255,0.0002251193,0.00010253728],"about_ca_topic_score_codex":0.00024385947,"about_ca_topic_score_gemma":0.000451934,"teacher_disagreement_score":0.01951804,"about_ca_system_score_codex":0.00012797878,"about_ca_system_score_gemma":0.000020773841,"threshold_uncertainty_score":0.74310523},"labels":[],"label_agreement":null},{"id":"W2017676831","doi":"10.1021/es001583f","title":"Variability in Carbon Isotopic Fractionation during Biodegradation of Chlorinated Ethenes:  Implications for Field Applications","year":2001,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":198,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Reductive dechlorination; Fractionation; Biodegradation; Chemistry; Environmental chemistry; Vinyl chloride; Microbial consortium; Isotope fractionation; Isotopes of carbon; Isotope analysis; Carbon fibers; Organic chemistry; Total organic carbon; Microorganism; Geology; Bacteria; Materials science","score_opus":0.00677777638133187,"score_gpt":0.23512368381101095,"score_spread":0.22834590742967908,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017676831","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99440426,0.000007317603,0.002391677,0.0016084753,0.000047110763,0.0006482787,0.000015058505,0.000040969935,0.0008368757],"genre_scores_gemma":[0.99877465,0.00005619336,0.0008869953,0.000038609123,0.000009168661,0.00014193906,0.00001391108,0.0000043610253,0.00007418451],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99897355,0.000016410038,0.0002653669,0.00037933537,0.00014518945,0.00022012893],"domain_scores_gemma":[0.99949497,0.00004901365,0.00013156074,0.00027981412,0.0000064447427,0.00003817795],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003763441,0.0000886036,0.000097170065,0.00022864713,0.00013365291,0.0000070963983,0.00030705484,0.00012014695,0.00025185794],"category_scores_gemma":[0.000090259295,0.00008919223,0.00002386764,0.0011930721,0.000530483,0.00018735735,0.00011803492,0.000088360466,0.00001824726],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000062760446,0.0000963052,0.38161087,0.0000016774698,7.1576574e-7,5.135398e-8,0.000026470898,0.000044366592,0.6102407,0.0002496602,0.00000176332,0.007721144],"study_design_scores_gemma":[0.00025465863,0.000043379725,0.65922564,0.0000027957199,0.0000035740495,0.000004437451,0.00007504768,0.00036555814,0.33553463,0.0024446845,0.0019435621,0.00010200083],"about_ca_topic_score_codex":0.0000868621,"about_ca_topic_score_gemma":0.0000847408,"teacher_disagreement_score":0.2776148,"about_ca_system_score_codex":0.00046627596,"about_ca_system_score_gemma":0.000014615568,"threshold_uncertainty_score":0.36371535},"labels":[],"label_agreement":null},{"id":"W2018102414","doi":"10.1007/s00253-012-4373-9","title":"The EmhABC efflux pump in Pseudomonas fluorescens LP6a is involved in naphthalene tolerance but not efflux","year":2012,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Directorate for Biological Sciences","keywords":"Efflux; Naphthalene; Phenanthrene; Pseudomonas fluorescens; Chemistry; Biochemistry; Biodegradation; Microbiology; Anthracene; Bacteria; Organic chemistry; Biology","score_opus":0.007831362043995574,"score_gpt":0.20253006661566275,"score_spread":0.19469870457166719,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018102414","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99499273,0.00026862833,0.000007057728,0.0035028935,0.00023972553,0.00043290682,0.000036069665,0.000056052195,0.0004639506],"genre_scores_gemma":[0.99681133,0.00070420967,0.00029033257,0.0019352884,0.000037133213,0.000021283284,0.00002156182,0.000013212124,0.00016564],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998141,0.00007452723,0.00041383252,0.00049844186,0.000055484383,0.0008167163],"domain_scores_gemma":[0.99932694,0.00012799451,0.00012322764,0.00034499945,0.000005009854,0.000071822855],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005086637,0.00026559457,0.00031398356,0.00010913529,0.00016248801,0.000013258676,0.0004137606,0.0008851078,0.0002612504],"category_scores_gemma":[0.000036980306,0.00019216059,0.000040185452,0.00040828352,0.0011942541,0.00006371397,0.00039352613,0.0005301545,0.00061468704],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007429048,0.00008915767,0.09706793,0.000005280446,0.0000074626296,0.0000022799288,0.00016259456,8.8607374e-7,0.89826196,0.00058912835,0.00085725565,0.0028817388],"study_design_scores_gemma":[0.0009472193,0.000043274158,0.07108575,0.000008995134,0.000005378768,0.000043901113,0.00015302024,0.0000078343,0.9017699,0.00010861067,0.025565857,0.00026026476],"about_ca_topic_score_codex":0.00014516404,"about_ca_topic_score_gemma":0.0013555791,"teacher_disagreement_score":0.02598218,"about_ca_system_score_codex":0.000096399795,"about_ca_system_score_gemma":0.000013673791,"threshold_uncertainty_score":0.7900763},"labels":[],"label_agreement":null},{"id":"W2018150967","doi":"10.1007/s10669-011-9335-8","title":"Remediation of oil spills in temperate and tropical coastal marine environments","year":2011,"lang":"en","type":"article","venue":"The Environmentalist","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Biostimulation; Bioaugmentation; Environmental remediation; Bioremediation; Environmental science; Temperate climate; Waste management; Environmental protection; Environmental engineering; Contamination; Ecology; Biology","score_opus":0.011292412139663048,"score_gpt":0.1839045512257187,"score_spread":0.17261213908605563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018150967","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99478024,0.000010293887,0.000007331819,0.00011517863,0.000052740415,0.00010155844,0.000023132281,0.000005469236,0.0049040583],"genre_scores_gemma":[0.998337,0.0003120322,0.0002846786,0.0001805195,0.000014750041,0.0000046801106,0.000020840944,0.000010015335,0.0008355353],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999009,0.000076541364,0.00027998158,0.00022435309,0.00022890349,0.00018122821],"domain_scores_gemma":[0.9996065,0.000016770093,0.000107341264,0.00020484845,4.0472105e-7,0.000064173284],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016761218,0.00012936165,0.00012981796,0.000020455915,0.000051071638,0.000005824304,0.00016089423,0.00005686481,0.0047943387],"category_scores_gemma":[0.000011070796,0.00009407954,0.000027735483,0.000072216935,0.00053460576,0.000111058536,0.00030941176,0.00009313596,0.00024434208],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004342002,0.00014065554,0.73212856,0.0000028320453,0.0000045979896,0.0000024846836,0.00065474235,0.0000052181335,0.26344967,0.000023403938,0.00007761885,0.0034667721],"study_design_scores_gemma":[0.00049887726,0.00005447867,0.9384226,0.0000040459286,0.000008519983,0.0000044792523,0.00014606246,0.000039143644,0.059480626,0.000058823363,0.00117382,0.000108506465],"about_ca_topic_score_codex":0.0006431723,"about_ca_topic_score_gemma":0.00054143235,"teacher_disagreement_score":0.20629404,"about_ca_system_score_codex":0.00007676003,"about_ca_system_score_gemma":0.000002001152,"threshold_uncertainty_score":0.9961154},"labels":[],"label_agreement":null},{"id":"W2018302291","doi":"10.1007/s10661-015-4490-x","title":"Screening of biosurfactant-producing bacteria from offshore oil and gas platforms in North Atlantic Canada","year":2015,"lang":"en","type":"article","venue":"Environmental Monitoring and Assessment","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Memorial University of Newfoundland","funders":"Petroleum Research Newfoundland and Labrador","keywords":"Halomonas; Diesel fuel; Seawater; Petroleum; Species evenness; Hydrocarbon; Environmental science; Bacteria; Biology; 16S ribosomal RNA; Food science; Chemistry; Species richness; Ecology","score_opus":0.016056512607652455,"score_gpt":0.2172485518790406,"score_spread":0.20119203927138815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018302291","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993717,0.00008367144,0.0000031257014,0.000075998614,0.00021468343,0.000051403884,0.000060523045,0.000006937603,0.00013197314],"genre_scores_gemma":[0.9970177,0.00031593486,0.002493995,0.000014131476,0.000049129594,0.0000020953805,0.000050513725,0.000010454428,0.00004604485],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988387,0.000021499538,0.00026599792,0.00032971136,0.00032293284,0.00022112038],"domain_scores_gemma":[0.99955356,0.000025973995,0.00010679514,0.00013804826,0.0000012291683,0.0001744069],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014481727,0.00016226819,0.00018934564,0.000022292303,0.000055462122,0.000022077693,0.00008830587,0.00004316407,0.00011732561],"category_scores_gemma":[0.000006821437,0.00014299144,0.00001427826,0.000071154696,0.00009003565,0.00015379964,0.00019645941,0.00012781129,0.000003220482],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001495967,0.00003355616,0.9090855,0.000005036702,0.000008012274,0.000008252859,0.00031691793,0.000058044778,0.07723935,2.549827e-7,0.000027584896,0.013202525],"study_design_scores_gemma":[0.0005147685,0.00004129804,0.98661876,0.00003624427,0.000008656714,0.000002734954,0.00091655017,0.00016667684,0.010911164,0.0000051416364,0.00060871034,0.00016930781],"about_ca_topic_score_codex":0.16629398,"about_ca_topic_score_gemma":0.07278584,"teacher_disagreement_score":0.09350814,"about_ca_system_score_codex":0.00029279408,"about_ca_system_score_gemma":0.000026519308,"threshold_uncertainty_score":0.9441334},"labels":[],"label_agreement":null},{"id":"W2018710872","doi":"10.1128/aem.70.8.4532-4537.2004","title":"Purification, Cloning, and Sequencing of a 3,5-Dichlorophenol Reductive Dehalogenase from <i>Desulfitobacterium frappieri</i> PCP-1","year":2004,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Dehalogenase; Corrinoid; Biochemistry; Chemistry; Open reading frame; Biology; Peptide sequence; Enzyme; DNA; Gene","score_opus":0.004993252527492052,"score_gpt":0.16216565155517335,"score_spread":0.1571723990276813,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018710872","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99863327,0.00016688806,0.00007658666,0.000108135464,0.00006783446,0.00023988429,0.00029301658,0.000017721772,0.00039663783],"genre_scores_gemma":[0.9968703,0.0002901571,0.0021322458,0.00036173718,0.000030095329,0.0000085532,0.00027249902,0.00001357673,0.00002084775],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989449,0.000023775541,0.00027637032,0.00047040576,0.000052044717,0.00023254764],"domain_scores_gemma":[0.99955344,0.000020988591,0.0001526384,0.00017307504,0.0000014827816,0.000098384575],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008314994,0.0001913831,0.0002148658,0.000024672123,0.00010286303,0.000010538498,0.00011187735,0.0001493788,0.00040873355],"category_scores_gemma":[0.0000044068574,0.00017507315,0.000027219743,0.0000625926,0.0008232053,0.00006563861,0.00017314925,0.00010638302,0.000099579636],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034901037,0.000056898924,0.005050477,0.0000033913627,0.000018954452,0.0000016807579,0.00084742834,0.000019843661,0.99278325,0.000050897328,0.000052132338,0.001080156],"study_design_scores_gemma":[0.0009425032,0.00007898206,0.041454516,0.000007863316,0.000022639328,0.000034106488,0.00080184464,0.0000022828176,0.9534186,0.00052524934,0.0024571356,0.00025426695],"about_ca_topic_score_codex":0.00033097315,"about_ca_topic_score_gemma":0.00003253586,"teacher_disagreement_score":0.03936463,"about_ca_system_score_codex":0.00015491573,"about_ca_system_score_gemma":0.000009724211,"threshold_uncertainty_score":0.71392757},"labels":[],"label_agreement":null},{"id":"W2019086744","doi":"10.1038/nsb866","title":"Identification and analysis of a bottleneck in PCB biodegradation","year":2002,"lang":"en","type":"article","venue":"Nature Structural Biology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":103,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Queen's University; University of British Columbia","funders":"","keywords":"Chemistry; Cleavage (geology); Biodegradation; Bioremediation; Degradation (telecommunications); Dioxygenase; Environmental chemistry; Pollutant; Stereochemistry; Biochemistry; Contamination; Organic chemistry; Enzyme; Biology","score_opus":0.0065436651852726225,"score_gpt":0.24064790245787773,"score_spread":0.2341042372726051,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019086744","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991177,0.00015931495,0.0000066807993,0.0003017939,0.00008435202,0.00006280006,0.000047109275,0.0000062671515,0.00021403677],"genre_scores_gemma":[0.9995235,0.00006336696,0.0001774883,0.000100061174,0.000006444614,5.0668115e-7,0.00007424714,0.0000014172568,0.00005295588],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994625,0.000039027047,0.00017364084,0.00018116963,0.00005501054,0.00008866378],"domain_scores_gemma":[0.9997744,0.000018124983,0.000092478054,0.00008704625,0.000006687197,0.00002124313],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007408345,0.00005998568,0.00012064542,0.00011194554,0.000019613159,0.00000505093,0.00007392699,0.00018193685,0.0014547544],"category_scores_gemma":[0.000044033655,0.000045150187,0.000027742168,0.0006079865,0.000104296894,0.000057527504,0.000030310284,0.00010203375,0.000014554446],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004713072,0.000004149305,0.3841872,0.0000013169652,0.00001714227,1.5749588e-7,0.00009103653,0.0000068757304,0.60584164,0.00013734699,0.00010969301,0.009598746],"study_design_scores_gemma":[0.00013067336,0.000015370062,0.97447455,8.6920824e-7,0.000031669155,9.2735195e-7,0.000010338083,0.003105157,0.021654436,0.00019128477,0.0003208914,0.00006386102],"about_ca_topic_score_codex":0.00006757252,"about_ca_topic_score_gemma":0.000416841,"teacher_disagreement_score":0.5902873,"about_ca_system_score_codex":0.000028309656,"about_ca_system_score_gemma":7.983618e-7,"threshold_uncertainty_score":0.9994581},"labels":[],"label_agreement":null},{"id":"W2019316548","doi":"10.1007/s00248-001-0023-y","title":"Survival of a GFP-Labeled Polychlorinated Biphenyl Degrading Psychrotolerant Pseudomonas spp. in 4 and 22 C Soil Microcosms","year":2001,"lang":"en","type":"article","venue":"Microbial Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Green fluorescent protein; Biology; Microorganism; Microbiology; Bacteria; Pseudomonas; Pseudomonas putida; Food science; Biochemistry; Gene","score_opus":0.010437330371197946,"score_gpt":0.22316327093459032,"score_spread":0.21272594056339236,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019316548","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975091,0.00004180662,0.0000142154295,0.00046863675,0.00043364547,0.00040511,0.000023363966,0.000027841248,0.0010762602],"genre_scores_gemma":[0.99852276,0.00016545082,0.00039845527,0.0003810418,0.000037056583,0.000007092403,0.000016311666,0.000017708815,0.00045412188],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983927,0.00012166019,0.00043997457,0.00044221853,0.00010876152,0.00049465586],"domain_scores_gemma":[0.9994805,0.00006002896,0.00016810423,0.000172568,0.0000128814845,0.00010595179],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00035432674,0.0002158274,0.0003813535,0.00012278865,0.00007765203,0.000016359067,0.00023161672,0.0002092279,0.0030899171],"category_scores_gemma":[0.00003055415,0.00020906336,0.00005701726,0.00047444424,0.00032921534,0.00009897155,0.00016662118,0.00017922804,0.00021854327],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015690195,0.00017717991,0.21241707,0.000008168471,0.000009416584,0.000026689699,0.00016042478,0.000013139351,0.78467655,0.000011016146,0.0011328652,0.001210552],"study_design_scores_gemma":[0.006826194,0.00044244732,0.55096936,0.000043774202,0.000025957414,0.0002393307,0.00016718266,0.0002830711,0.41726825,0.00014415041,0.022843868,0.0007464399],"about_ca_topic_score_codex":0.0009334658,"about_ca_topic_score_gemma":0.011397965,"teacher_disagreement_score":0.36740834,"about_ca_system_score_codex":0.0001596844,"about_ca_system_score_gemma":0.000028896227,"threshold_uncertainty_score":0.9978214},"labels":[],"label_agreement":null},{"id":"W2019975435","doi":"10.1007/s10295-006-0136-x","title":"Biodegradation of hexahydro-1,3,5-trinitro-1,3,5-triazine by novel fungi isolated from unexploded ordnance contaminated marine sediment","year":2006,"lang":"en","type":"article","venue":"Journal of Industrial Microbiology & Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Office of Naval Research; Strategic Environmental Research and Development Program; U.S. Naval Research Laboratory; Natural Sciences and Engineering Research Council of Canada; U.S. Navy","keywords":"Acremonium; Environmental chemistry; Trinitrotoluene; Contamination; Sediment; Biodegradation; Bioremediation; Chemistry; Biotransformation; Triazine; Ecology; Organic chemistry; Biology; Botany","score_opus":0.009869455151257646,"score_gpt":0.1912485068868386,"score_spread":0.18137905173558094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019975435","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994483,0.00024418128,0.00083302124,0.0025002146,0.0009064278,0.0003288199,0.0005792015,0.00004990237,0.00007526067],"genre_scores_gemma":[0.99734807,0.00021027953,0.0014724944,0.00017079066,0.000168501,0.0000017109111,0.00045074883,0.000021677728,0.00015573444],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972558,0.00015276445,0.0015611465,0.0004144474,0.00016187136,0.0004539804],"domain_scores_gemma":[0.9975197,0.00012820853,0.0018685691,0.0003049124,0.00009383213,0.00008479506],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00049843115,0.0003420675,0.0007769129,0.00027027508,0.00007431349,0.000014595953,0.0006173594,0.001469563,0.0012846385],"category_scores_gemma":[0.00015520456,0.0002841212,0.0001684299,0.0007808729,0.00063140853,0.00016132738,0.0002852881,0.0008017607,0.000085320855],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006266127,0.00045537815,0.01144962,0.0000016875815,0.00009748828,0.000010691292,0.000012473335,0.00002735962,0.96561277,0.000024421715,0.016607242,0.0050742747],"study_design_scores_gemma":[0.0056310412,0.0008231362,0.0014257432,0.000035497313,0.000083334584,0.00010160019,0.00003173602,0.0000504978,0.9546091,0.00007308758,0.036860794,0.00027442825],"about_ca_topic_score_codex":0.0012240617,"about_ca_topic_score_gemma":0.00019272097,"teacher_disagreement_score":0.020253552,"about_ca_system_score_codex":0.0003094172,"about_ca_system_score_gemma":0.00007372829,"threshold_uncertainty_score":0.9999611},"labels":[],"label_agreement":null},{"id":"W2020116739","doi":"10.1016/s0006-291x(02)02711-0","title":"Characterization of tetrachlorohydroquinone reductive dehalogenase from Sphingomonas sp. UG30","year":2002,"lang":"en","type":"article","venue":"Biochemical and Biophysical Research Communications","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Guelph","funders":"","keywords":"Enzyme; Sphingomonas; Biochemistry; Dehalogenase; Pentachlorophenol; Substrate (aquarium); Enzyme kinetics; Biology; Chemistry; Active site; Environmental chemistry; Gene; Ecology","score_opus":0.06607049932993829,"score_gpt":0.3014547255825957,"score_spread":0.23538422625265737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020116739","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957332,0.00010632743,0.0000123795,0.0024318306,0.00001632963,0.00018896449,0.0001581062,0.000019152503,0.0013337339],"genre_scores_gemma":[0.99793553,0.0008379793,0.0007742463,0.000056184395,0.00004811705,0.000010355397,0.0001794404,0.000007670779,0.00015045611],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987318,0.00014624541,0.00023073606,0.00027512314,0.00038335854,0.0002327252],"domain_scores_gemma":[0.99886596,0.00020609201,0.00006802548,0.00063014013,0.000055437264,0.00017434455],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00019769315,0.000101741316,0.00014196594,0.0000413926,0.0001815962,0.00002698567,0.000545443,0.0000998559,0.0010113736],"category_scores_gemma":[0.00019365248,0.000085603904,0.000047179,0.00051046466,0.0013284321,0.00011954587,0.0005602414,0.0002809794,0.00034193855],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014667804,0.00045173048,0.0008909414,0.0000037986636,0.0000083204595,4.0884078e-7,0.0002084113,3.696888e-8,0.9939045,0.00014347129,0.00060484634,0.0037689195],"study_design_scores_gemma":[0.00018960514,0.000059675713,0.027321687,0.000017825392,0.0000082918,8.859262e-7,0.00004138516,0.0008855379,0.9674315,0.00040183475,0.00351785,0.00012394677],"about_ca_topic_score_codex":0.00033011718,"about_ca_topic_score_gemma":0.000013099094,"teacher_disagreement_score":0.026472973,"about_ca_system_score_codex":0.000064855776,"about_ca_system_score_gemma":0.0000064775054,"threshold_uncertainty_score":0.99990183},"labels":[],"label_agreement":null},{"id":"W2020175215","doi":"10.1080/10934529.2011.539115","title":"An experimental study on the bio-surfactant-assisted remediation of crude oil and salt contaminated soils","year":2011,"lang":"en","type":"article","venue":"Journal of Environmental Science and Health Part A","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Northern British Columbia","funders":"","keywords":"Rhamnolipid; Environmental remediation; Soil contamination; Pulmonary surfactant; Total petroleum hydrocarbon; Chemistry; Contamination; Environmental chemistry; Soil water; Salt (chemistry); Bioremediation; Hydrocarbon; Petroleum; Environmental science; Soil science; Organic chemistry; Geology","score_opus":0.054951593093795124,"score_gpt":0.2966760163669419,"score_spread":0.24172442327314678,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020175215","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988424,0.00007637829,0.0000010927936,0.00045593985,0.00012715596,0.0001432556,0.000010046899,0.0000036303084,0.00034008714],"genre_scores_gemma":[0.9989302,0.00028166937,0.00010281416,0.00063302025,0.000021742742,0.0000015568748,7.8294073e-7,0.0000052151786,0.00002299526],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99819285,0.0001294905,0.00049967424,0.00022668506,0.0007048222,0.00024647315],"domain_scores_gemma":[0.99898547,0.00002854305,0.0005433262,0.0001516146,0.000009894987,0.0002811733],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022143642,0.00012458817,0.00020219322,0.00006146629,0.00031188526,0.000025728592,0.00023939721,0.00003650391,0.00053260085],"category_scores_gemma":[0.000025671261,0.00007836461,0.00002529234,0.00018536382,0.0008138762,0.000393606,0.00008576891,0.00012961401,0.000013312104],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009122973,0.0014329108,0.13837823,0.0000037179018,0.000006770905,0.0000044479284,0.006447541,7.057661e-7,0.841631,0.000010647148,0.00021365522,0.011779157],"study_design_scores_gemma":[0.00060075615,0.0029590428,0.9083808,0.000020268515,0.000007935997,0.000018408613,0.0052753333,0.00002330918,0.08236217,0.000005962178,0.00025461864,0.00009136653],"about_ca_topic_score_codex":0.00010561626,"about_ca_topic_score_gemma":0.00005645214,"teacher_disagreement_score":0.7700026,"about_ca_system_score_codex":0.00023025667,"about_ca_system_score_gemma":0.000049927716,"threshold_uncertainty_score":0.5831606},"labels":[],"label_agreement":null},{"id":"W2020594862","doi":"10.1139/w02-024","title":"Hydrophobicity development, alkane oxidation, and crude-oil emulsification in a <i>Rhodococcus</i> species","year":2002,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Alkane; Rhodococcus; Hexadecane; Chemistry; Emulsion; Strain (injury); Chromatography; Chemical engineering; Hydrocarbon; Organic chemistry; Biology; Enzyme","score_opus":0.016411345102498774,"score_gpt":0.18187717650487673,"score_spread":0.16546583140237794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020594862","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997166,0.00021912162,0.000012562039,0.0008937627,0.0001489844,0.000041266157,0.000012368216,0.0000024370552,0.0015035361],"genre_scores_gemma":[0.9976998,0.00014137322,0.0005925609,0.0006103409,0.0000275928,4.4031287e-7,0.000009506773,0.000004967191,0.0009134111],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991639,0.00006782741,0.00036212054,0.00013817757,0.00003534005,0.00023262376],"domain_scores_gemma":[0.9994946,0.00002221329,0.00018038819,0.00007325778,0.000021072094,0.00020843932],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002481207,0.000094929375,0.00014988736,0.0001350666,0.0000770276,0.000020963433,0.00016049825,0.00009218845,0.004141581],"category_scores_gemma":[0.00006162039,0.0000853398,0.000022036038,0.0001776038,0.00020322436,0.00010560574,0.000017448707,0.00012879039,0.00022029164],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000038616868,0.000013942153,0.06739842,0.0000025167435,0.000004421563,0.000016395608,0.00070537254,0.00000612966,0.91808265,0.0000048459797,0.009980518,0.0037809028],"study_design_scores_gemma":[0.000794701,0.00006123447,0.21007498,0.000029248224,0.000007464969,0.00038574467,0.00012874042,0.0000138475325,0.15100193,0.000019518578,0.6372264,0.0002561772],"about_ca_topic_score_codex":0.0007652959,"about_ca_topic_score_gemma":0.058003824,"teacher_disagreement_score":0.7670807,"about_ca_system_score_codex":0.00024433655,"about_ca_system_score_gemma":0.00006130536,"threshold_uncertainty_score":0.9967688},"labels":[],"label_agreement":null},{"id":"W2020861166","doi":"10.1016/s0141-1136(99)00080-x","title":"Field observations on the variability of crude oil impact on indigenous hydrocarbon-degrading bacteria from sub-Antarctic intertidal sediments","year":2000,"lang":"en","type":"article","venue":"Marine Environmental Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":63,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Polar Knowledge Canada","keywords":"Intertidal zone; Biodegradation; Petroleum; Pollution; Environmental science; Hydrocarbon; Environmental chemistry; Contamination; Bacteria; Ecology; Geology; Biology; Chemistry; Paleontology","score_opus":0.028467005334010125,"score_gpt":0.2750734669999406,"score_spread":0.2466064616659305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020861166","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993365,0.000002407197,7.8753595e-7,0.00050280493,0.000064466025,0.000271154,0.00010662895,0.000013449094,0.0056733238],"genre_scores_gemma":[0.99843955,0.00009745323,0.00005488683,0.0003893167,0.00004684414,0.000017157943,0.00010460569,0.000018266559,0.00083193387],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975097,0.0003548905,0.00033461815,0.00045136773,0.0008737452,0.00047565598],"domain_scores_gemma":[0.9985392,0.0006720037,0.00006905356,0.0005618128,0.0000030815565,0.00015484325],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00090170495,0.00020719605,0.00018274963,0.00005113203,0.00025133192,0.00004593399,0.00051811535,0.000104380204,0.05816314],"category_scores_gemma":[0.000105314255,0.00013971954,0.000107093656,0.00023725616,0.00030490902,0.000115855364,0.00038067743,0.0004909898,0.0014425035],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037628386,0.00056224724,0.6205761,0.000003021461,0.000030946474,0.0000041956505,0.00043246953,0.000029489573,0.3548803,0.000002847988,0.00043212468,0.022669965],"study_design_scores_gemma":[0.00028419076,0.00050776714,0.83405316,0.000016417614,0.0000066923003,0.000001002281,0.00004627769,0.00014811895,0.16390166,0.00021304758,0.00069173565,0.00012993703],"about_ca_topic_score_codex":0.0029533498,"about_ca_topic_score_gemma":0.0001804649,"teacher_disagreement_score":0.21347703,"about_ca_system_score_codex":0.000771982,"about_ca_system_score_gemma":0.000020348842,"threshold_uncertainty_score":0.999335},"labels":[],"label_agreement":null},{"id":"W2020894519","doi":"10.1128/aem.01873-12","title":"Functional Characterization of Reductive Dehalogenases by Using Blue Native Polyacrylamide Gel Electrophoresis","year":2012,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Sächsisches Staatsministerium für Wissenschaft und Kunst","keywords":"Dehalococcoides; Dehalogenase; Polyacrylamide gel electrophoresis; Gel electrophoresis; Enzyme; Biology; Biochemistry; Strain (injury); Bacteria; Two-dimensional gel electrophoresis; Chemistry; Gene; Microbiology; Proteomics; Vinyl chloride; Genetics","score_opus":0.006372155971133923,"score_gpt":0.17437172134437914,"score_spread":0.16799956537324523,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020894519","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99902683,0.000097469325,0.00015343788,0.000025255777,0.00009877719,0.00017096922,0.00030013706,0.000008882322,0.00011821034],"genre_scores_gemma":[0.9986228,0.00014213183,0.00016016306,0.00020743109,0.000041042935,0.000004441973,0.0007162501,0.000011544593,0.00009423711],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99919087,0.000038943224,0.00019588471,0.00023850701,0.000055564826,0.00028020656],"domain_scores_gemma":[0.99968916,0.000018319492,0.00013850907,0.0000790325,0.0000012772203,0.00007367516],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0000811228,0.00015352665,0.00015729084,0.000027381502,0.00009205089,0.000004091263,0.00006114052,0.00011409,0.0013071777],"category_scores_gemma":[0.0000027017777,0.00013871405,0.00002990516,0.00006846869,0.00044209964,0.00009334053,0.000105293366,0.00007257098,0.00007700414],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043459862,0.00012859126,0.01710847,0.000002136219,0.000020780066,1.1168017e-7,0.00021206032,0.000003084896,0.9813714,0.000016197142,0.00033458983,0.00075914315],"study_design_scores_gemma":[0.00026218398,0.000037049864,0.06624469,0.0000016183569,0.000019816342,0.000023889252,0.00016127453,0.000006466708,0.9307907,0.000007756513,0.0022869604,0.00015754435],"about_ca_topic_score_codex":0.00003316536,"about_ca_topic_score_gemma":0.0000018066768,"teacher_disagreement_score":0.050580624,"about_ca_system_score_codex":0.00013287694,"about_ca_system_score_gemma":0.00000399887,"threshold_uncertainty_score":0.9996058},"labels":[],"label_agreement":null},{"id":"W2021361246","doi":"10.1007/s00253-006-0468-5","title":"Monorhamnolipids and 3-(3-hydroxyalkanoyloxy)alkanoic acids (HAAs) production using Escherichia coli as a heterologous host","year":2006,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":115,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; Armand Frappier Museum","funders":"Dirección General de Asuntos del Personal Académico, Universidad Nacional Autónoma de México","keywords":"Escherichia coli; Recombinant DNA; Heterologous; Heterologous expression; Operon; Chemistry; Biochemistry; Bacteria; Fatty acid; Moiety; Pseudomonas aeruginosa; Strain (injury); Pseudomonadaceae; Microbiology; Biology; Stereochemistry; Gene","score_opus":0.004641251235114033,"score_gpt":0.18595790764458825,"score_spread":0.18131665640947423,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021361246","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970277,0.00017863342,0.000077974735,0.0013245286,0.00021365426,0.00040639436,0.000019420415,0.00016371225,0.00058799185],"genre_scores_gemma":[0.99714106,0.00015480052,0.0016328706,0.0007486455,0.00006718534,0.000009708687,0.000039590795,0.000016940714,0.0001892124],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983987,0.000043628836,0.00030187765,0.00073982246,0.00004181161,0.00047416743],"domain_scores_gemma":[0.99951506,0.000018171142,0.00015260071,0.00025085642,0.0000075915195,0.000055706136],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00017794363,0.00028273923,0.00030269913,0.0001037886,0.00025165724,0.00002123398,0.00017144276,0.00088128063,0.00018202122],"category_scores_gemma":[0.000016615599,0.0002491941,0.00003202577,0.00028265617,0.0013780298,0.00006206686,0.00033490724,0.00030870838,0.00018306551],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006737125,0.00006563994,0.005180484,0.000006923165,0.000015540725,0.000003748038,0.00003153061,0.000007392463,0.99228317,0.00035252218,0.0004789525,0.0015067171],"study_design_scores_gemma":[0.0005947776,0.00016507875,0.0060046427,0.000004621414,0.000032547272,0.00029647545,0.000045947963,0.00003751329,0.97486156,0.000534578,0.017074296,0.00034793868],"about_ca_topic_score_codex":0.0002625253,"about_ca_topic_score_gemma":0.00024648625,"teacher_disagreement_score":0.017421596,"about_ca_system_score_codex":0.000071540824,"about_ca_system_score_gemma":0.000012853549,"threshold_uncertainty_score":0.999996},"labels":[],"label_agreement":null},{"id":"W2021634692","doi":"10.1139/w05-090","title":"Culture-dependent and -independent approaches establish the complexity of a PAH-degrading microbial consortium","year":2005,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Temperature gradient gel electrophoresis; Biology; 16S ribosomal RNA; Library; Proteobacteria; Microbiology; Sphingomonas; Ascomycota; Microbial consortium; Stenotrophomonas; Food science; Enrichment culture; Microbial population biology; Strain (injury); Bacteria; Microorganism; Gene; Genetics","score_opus":0.036987472887892024,"score_gpt":0.2070339947438375,"score_spread":0.17004652185594546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021634692","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99525595,0.000487918,0.000049914648,0.0026677898,0.00028543698,0.00015454552,0.00014187077,0.0000031835593,0.0009533861],"genre_scores_gemma":[0.9981826,0.000044887194,0.0008864925,0.0005868612,0.00009055013,3.6927483e-7,0.000008909105,0.000007277431,0.00019205637],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988539,0.00014181284,0.00045293855,0.00016826285,0.000066032066,0.00031702712],"domain_scores_gemma":[0.9991694,0.000030070321,0.00037145615,0.00012948827,0.000033353877,0.00026623523],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005571891,0.00013963449,0.0002526515,0.00007628456,0.00014211041,0.000035194473,0.00036640535,0.00012947616,0.0010528072],"category_scores_gemma":[0.000057879104,0.00009289077,0.000078689576,0.000116187985,0.0012560879,0.00010754048,0.00005743663,0.00026249434,0.000034081608],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003010785,0.00003666705,0.027673813,0.0000067991355,0.00004553013,0.000015040772,0.0016948808,0.000055653192,0.9471668,0.00018555812,0.020500774,0.0025883487],"study_design_scores_gemma":[0.0037624943,0.00058566534,0.08319813,0.00008546961,0.00020061315,0.0066439346,0.0029244092,0.00008454278,0.4322868,0.00047061068,0.46882093,0.00093642424],"about_ca_topic_score_codex":0.0019544389,"about_ca_topic_score_gemma":0.0705272,"teacher_disagreement_score":0.51488006,"about_ca_system_score_codex":0.00019256437,"about_ca_system_score_gemma":0.00015824247,"threshold_uncertainty_score":0.99986035},"labels":[],"label_agreement":null},{"id":"W2021691468","doi":"10.1002/bit.10320","title":"Kinetics of benzene biotransformation under microaerophilic and oxygen‐limited conditions","year":2002,"lang":"en","type":"article","venue":"Biotechnology and Bioengineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Biotechnology Research Institute","funders":"","keywords":"Benzene; Biotransformation; Chemistry; Mineralization (soil science); Environmental chemistry; Oxygen; Microaerophile; Phenol; Metabolite; Anoxic waters; Biodegradation; Organic chemistry; Biochemistry; Nitrogen; Enzyme; Bacteria; Biology","score_opus":0.008863405869534647,"score_gpt":0.17844941372378975,"score_spread":0.1695860078542551,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021691468","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99685663,0.00023946704,0.0009767393,0.0016113098,0.000039512503,0.000082651844,0.00002320413,0.00005915118,0.00011136319],"genre_scores_gemma":[0.9981474,0.0008347144,0.0009113655,0.000069564594,0.0000052284845,8.0067923e-7,0.0000070836913,0.0000042671136,0.000019541058],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99958694,0.0000047316285,0.00013378407,0.00011718621,0.000043186898,0.00011417339],"domain_scores_gemma":[0.9998374,0.000008185401,0.000042076714,0.000076304525,0.0000035111093,0.000032515036],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000025522348,0.00007954809,0.00008181054,0.00007015319,0.000032831595,0.000005676044,0.00005100237,0.00018161062,0.00028746433],"category_scores_gemma":[0.000007210072,0.00007198707,0.000012820771,0.00017470878,0.00019192963,0.00005154037,0.000039882056,0.00006896608,0.000020232663],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000001262815,0.000020141373,0.00060723175,0.000009756459,0.0000070371307,3.8530382e-7,0.000039619266,0.00004922979,0.9969492,0.00021473673,0.00006457376,0.0020368134],"study_design_scores_gemma":[0.0002548866,0.00007848531,0.0350436,0.000010827167,0.000013465911,0.00002418709,0.00003886885,0.0025555906,0.96038055,0.00003708606,0.0014396686,0.00012279866],"about_ca_topic_score_codex":0.00000776783,"about_ca_topic_score_gemma":0.000010605146,"teacher_disagreement_score":0.03656868,"about_ca_system_score_codex":0.000013748022,"about_ca_system_score_gemma":3.2758606e-7,"threshold_uncertainty_score":0.3147533},"labels":[],"label_agreement":null},{"id":"W2021936240","doi":"10.1021/es015645t","title":"The Use of Box Lysimeters with Freshly Contaminated Soils To Study the Phytoremediation of Recalcitrant Organic Contaminants","year":2002,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"U.S. Environmental Protection Agency; U.S. Department of Defense","keywords":"Lysimeter; Loam; Phytoremediation; Environmental chemistry; Contamination; Soil water; Environmental science; Soil contamination; Soil test; Leachate; Chemistry; Animal science; Soil science; Biology","score_opus":0.015648499621882597,"score_gpt":0.20374479981530885,"score_spread":0.18809630019342627,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021936240","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982292,0.000022434815,0.00009378299,0.0006730455,0.00008229218,0.0007979683,0.00001683803,0.000023956361,0.000060448572],"genre_scores_gemma":[0.9993666,0.000055780725,0.00027622562,0.000119990356,0.000004453307,0.000014741933,0.0000010947264,0.000009180106,0.00015193514],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99812233,0.00006901564,0.00036766523,0.0003960199,0.00066253333,0.000382426],"domain_scores_gemma":[0.9990229,0.000085431784,0.00026770247,0.0005366708,0.000009514064,0.000077764395],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0005028385,0.00016189268,0.00018706018,0.00011633068,0.0003646719,0.000024940877,0.0008524509,0.00006988787,0.00064912013],"category_scores_gemma":[0.00011200139,0.00008742796,0.00003103732,0.001451729,0.0030270459,0.00021607023,0.0003214716,0.00013680768,0.00015373754],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025694488,0.00026509416,0.118076295,5.1371995e-7,0.000012928329,0.0000024658239,0.0008462814,0.000041780208,0.8664839,0.000006167416,0.00012370483,0.0141151305],"study_design_scores_gemma":[0.0005498734,0.00094453426,0.31116226,0.000006479955,0.000027730232,0.000007692842,0.0016671704,0.00028583006,0.6833322,0.000008489346,0.0018517856,0.00015597095],"about_ca_topic_score_codex":0.000066226305,"about_ca_topic_score_gemma":0.00034150132,"teacher_disagreement_score":0.19308597,"about_ca_system_score_codex":0.0002018808,"about_ca_system_score_gemma":0.000008836181,"threshold_uncertainty_score":0.9996861},"labels":[],"label_agreement":null},{"id":"W2021970520","doi":"10.1016/j.envpol.2005.02.017","title":"Conditions for effective removal of pyrene from an artificially contaminated soil using Pseudomonas aeruginosa 57SJ rhamnolipids","year":2005,"lang":"en","type":"article","venue":"Environmental Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":63,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Pyrene; Rhamnolipid; Partition coefficient; Chemistry; Environmental remediation; Environmental chemistry; Soil contamination; Contamination; Effluent; Critical micelle concentration; Biodegradation; Chromatography; Soil water; Micelle; Environmental engineering; Aqueous solution; Environmental science; Organic chemistry; Soil science; Pseudomonas aeruginosa; Bacteria","score_opus":0.00918138203979993,"score_gpt":0.2448321981397196,"score_spread":0.23565081609991967,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021970520","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99619293,0.000027768072,0.0012708217,0.00019437728,0.00019103773,0.0006376605,0.0011803275,0.000035785946,0.0002692762],"genre_scores_gemma":[0.9966164,0.000012835226,0.002262473,0.00027236182,0.00016612661,0.0000116547,0.00052494986,0.000019459,0.00011372265],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99864817,0.00009561187,0.00035000432,0.00038150436,0.00025337495,0.0002713443],"domain_scores_gemma":[0.99942887,0.000031337975,0.00020804082,0.00020702984,0.0000034979162,0.00012120032],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017949271,0.00019240005,0.00020062632,0.000044973538,0.00018381492,0.000015890228,0.00013300225,0.00014071127,0.0017049743],"category_scores_gemma":[0.000017596549,0.000196909,0.00009935005,0.00009607154,0.00034310465,0.0003625029,0.000066735054,0.00008272487,0.00021252154],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000097567565,0.00030277533,0.0027095957,0.0000020554885,0.000018653907,0.0000017950485,0.00028720722,0.0022604067,0.9808564,0.00002325545,0.00014272095,0.013297556],"study_design_scores_gemma":[0.0013646835,0.00021593033,0.18111464,0.000014863732,0.00007032397,0.000015375306,0.00023228292,0.014650136,0.79900956,0.00018416425,0.002809174,0.00031884262],"about_ca_topic_score_codex":0.00036655043,"about_ca_topic_score_gemma":0.00039412815,"teacher_disagreement_score":0.18184683,"about_ca_system_score_codex":0.0005401238,"about_ca_system_score_gemma":0.000011042825,"threshold_uncertainty_score":0.9992076},"labels":[],"label_agreement":null},{"id":"W2022045238","doi":"10.1038/sj.jim.2900789","title":"Monitoring bioremediation in creosote-contaminated soils using chemical analysis and toxicity tests","year":2000,"lang":"en","type":"article","venue":"Journal of Industrial Microbiology & Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biorem Technologies (Canada); University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bioremediation; Microcosm; Environmental chemistry; Earthworm; Creosote; Biodegradation; Contamination; Soil contamination; Eisenia andrei; Chemistry; Toxicity; Mineralization (soil science); Biostimulation; Soil water; Germination; Bioassay; Pyrene; Acute toxicity; Biology; Horticulture; Agronomy; Ecology","score_opus":0.018519320846579063,"score_gpt":0.23923631982857135,"score_spread":0.2207169989819923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022045238","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987958,0.000084389845,0.00002628614,0.00070444256,0.00021958005,0.00011885637,0.000012770525,0.000017701555,0.000020140084],"genre_scores_gemma":[0.99853945,0.0002569237,0.0009968498,0.000064212305,0.0001183553,4.2140704e-7,0.000005496847,0.0000070487645,0.000011248207],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984667,0.00012969668,0.00071727665,0.00027616214,0.000078202545,0.00033201935],"domain_scores_gemma":[0.9992928,0.00006772285,0.0004039411,0.00013663934,0.000017256236,0.000081657294],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000537794,0.0001790904,0.00046870063,0.00042947734,0.00005025078,0.00001594042,0.00026357497,0.0010875697,0.00059697655],"category_scores_gemma":[0.00020772555,0.00015339558,0.00009878258,0.0012000405,0.00041051395,0.00013332038,0.000088816334,0.00064527825,0.000023850038],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009102229,0.00006243942,0.16785836,5.5898266e-7,0.000056635385,0.000016824719,0.0000364698,0.000041388543,0.8052182,3.8571332e-7,0.000040191007,0.026577499],"study_design_scores_gemma":[0.0013138141,0.00015947752,0.018808179,0.000029790415,0.0001231325,0.0001688936,0.00003650234,0.000091538044,0.97864866,0.000017289854,0.00043087488,0.00017184606],"about_ca_topic_score_codex":0.00018154518,"about_ca_topic_score_gemma":0.00009273132,"teacher_disagreement_score":0.17343044,"about_ca_system_score_codex":0.00028633667,"about_ca_system_score_gemma":0.000036477533,"threshold_uncertainty_score":0.8388334},"labels":[],"label_agreement":null},{"id":"W2022152247","doi":"10.1038/sj.jim.7000145","title":"Volatile hydrocarbon biodegradation by a mixed-bacterial culture during growth on crude oil","year":2001,"lang":"en","type":"article","venue":"Journal of Industrial Microbiology & Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biodegradation; Methylcyclohexane; Hydrocarbon; Chemistry; Laboratory flask; Bacterial growth; Biomass (ecology); Food science; Environmental chemistry; Bacteria; Chromatography; Organic chemistry; Biology; Ecology; Toluene","score_opus":0.009049732700205674,"score_gpt":0.19419863117843503,"score_spread":0.18514889847822935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022152247","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939864,0.00006223057,0.000013110071,0.003945502,0.0014792703,0.0001001356,0.000086877415,0.000051268453,0.00027517145],"genre_scores_gemma":[0.9981576,0.0005176856,0.00017435664,0.00028699468,0.00041054253,0.0000013500097,0.0000734956,0.000017531675,0.00036043825],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981907,0.00016147993,0.0007360068,0.0003512143,0.00012231182,0.000438257],"domain_scores_gemma":[0.9988452,0.000035119698,0.00077254814,0.00020365213,0.000034088527,0.000109380795],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0003182801,0.00028203888,0.0004274423,0.00020916431,0.00013769123,0.00002750803,0.0005182893,0.0015278028,0.0008594741],"category_scores_gemma":[0.000242934,0.00021782325,0.00014254925,0.00047282368,0.00039581943,0.000153037,0.00014345998,0.00093684404,0.00021436556],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005753402,0.00015100797,0.0037500442,0.000001416874,0.000039010523,0.000027883592,0.00003260818,0.0000025145387,0.96026254,0.000009549194,0.029273976,0.0058740983],"study_design_scores_gemma":[0.0024098584,0.0007542055,0.00032666925,0.00003075598,0.000029335966,0.00060579804,0.00003929744,0.000002426494,0.899482,0.000029978373,0.09605508,0.00023457511],"about_ca_topic_score_codex":0.000057644695,"about_ca_topic_score_gemma":0.00004529267,"teacher_disagreement_score":0.0667811,"about_ca_system_score_codex":0.00033501495,"about_ca_system_score_gemma":0.000040885076,"threshold_uncertainty_score":0.99976844},"labels":[],"label_agreement":null},{"id":"W2022859630","doi":"10.1016/j.biortech.2008.03.070","title":"Scale-up impacts on mass transfer and bioremediation of suspended naphthalene particles in bead mill bioreactors","year":2008,"lang":"en","type":"article","venue":"Bioresource Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Environment and Climate Change Canada; University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Bioreactor; Naphthalene; SCALE-UP; Volume (thermodynamics); Bead; Mass transfer; Biodegradation; Bioremediation; Chemistry; Chromatography; Materials science; Chemical engineering; Pulp and paper industry; Composite material; Contamination; Organic chemistry; Thermodynamics; Biology","score_opus":0.01213654965076269,"score_gpt":0.20773626597937286,"score_spread":0.19559971632861017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022859630","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99843323,0.00005585389,0.000009030998,0.0008823334,0.000060575472,0.00024981317,0.000030019533,0.00008222086,0.0001969072],"genre_scores_gemma":[0.999403,0.00020440368,0.00023085024,0.00009095669,0.000011817203,0.0000048639467,0.000009556321,0.000014158939,0.000030405907],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986622,0.000046398156,0.0003515197,0.00035781437,0.0002325352,0.0003495418],"domain_scores_gemma":[0.99952066,0.000041068623,0.000081733146,0.0002464232,0.000010898168,0.00009924384],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018085924,0.00018544035,0.00024450512,0.000301067,0.000057035308,0.0000050568815,0.00020415995,0.00030542427,0.0002731616],"category_scores_gemma":[0.00007998183,0.00014155355,0.000042333475,0.00070138916,0.00077422976,0.00007051612,0.000058629834,0.00015635592,0.00008709469],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049569837,0.00008768025,0.39694643,0.0000043733885,0.0000035891205,0.0000072776957,0.00029544486,0.0000021378357,0.5995279,0.000018962925,0.000107678905,0.0029489256],"study_design_scores_gemma":[0.0008593261,0.000193926,0.3146908,0.000014879959,0.0000054239936,0.000014709512,0.000139716,0.000033557142,0.6831833,0.00009930973,0.00061475806,0.00015029818],"about_ca_topic_score_codex":0.00014235849,"about_ca_topic_score_gemma":0.00031079404,"teacher_disagreement_score":0.08365537,"about_ca_system_score_codex":0.000085089014,"about_ca_system_score_gemma":0.000012497817,"threshold_uncertainty_score":0.5772386},"labels":[],"label_agreement":null},{"id":"W2023004010","doi":"10.1271/bbb.80340","title":"Recombinant Protein Secretion in<i>Pseudozyma flocculosa</i>and<i>Pseudozyma antarctica</i>with a Novel Signal Peptide","year":2008,"lang":"en","type":"article","venue":"Bioscience Biotechnology and Biochemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University; Université Laval","funders":"","keywords":"Signal peptide; Secretion; Recombinant DNA; Secretory protein; Green fluorescent protein; Biology; Secretory pathway; Cell biology; Molecular biology; Biochemistry; Gene; Cell","score_opus":0.007057249189190839,"score_gpt":0.18266262658452084,"score_spread":0.17560537739533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023004010","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99677354,0.00005584565,0.00013957736,0.0023845476,0.000039008188,0.00027729745,0.000020360612,0.00007590134,0.00023391702],"genre_scores_gemma":[0.99611366,0.00023562928,0.0030531143,0.00026675378,0.000014311989,0.000012313571,0.000008011196,0.000008096026,0.00028812085],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983122,0.000018135577,0.0002675008,0.0007392171,0.00022983787,0.0004331079],"domain_scores_gemma":[0.9994692,0.000016857155,0.00012299734,0.00024006839,0.000011975386,0.00013890574],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026559754,0.0002340188,0.00019532094,0.00007036972,0.0002604805,0.000024869405,0.00028079108,0.000418514,0.00012317083],"category_scores_gemma":[0.000063056286,0.00017982148,0.000025147523,0.00059525715,0.0021960803,0.00016052672,0.000269518,0.00029458522,0.000022626642],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005059651,0.000113150905,0.043575913,0.000014102139,0.000002536129,0.000025430416,0.000054035845,4.1670384e-7,0.9552231,0.00003175602,0.000100536956,0.0008084201],"study_design_scores_gemma":[0.0007269017,0.00021540573,0.040709108,0.000057432804,0.0000053299145,0.0005295091,0.00010698014,0.00019552837,0.95566356,0.000038209848,0.0014110147,0.00034100632],"about_ca_topic_score_codex":0.0001576981,"about_ca_topic_score_gemma":0.00006727773,"teacher_disagreement_score":0.002913537,"about_ca_system_score_codex":0.00009227893,"about_ca_system_score_gemma":0.00005198098,"threshold_uncertainty_score":0.8091549},"labels":[],"label_agreement":null},{"id":"W2023033129","doi":"10.1007/s00248-003-2024-5","title":"Biostimulation of Natural Microbial Assemblages in Oil-Amended Vegetated and Desert Sub-Antarctic Soils","year":2003,"lang":"en","type":"article","venue":"Microbial Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Rimouski","funders":"","keywords":"Bioremediation; Soil water; Biostimulation; Fertilizer; Environmental science; Environmental chemistry; Ecology; Agronomy; Biology; Contamination; Soil science; Chemistry","score_opus":0.006416787556913884,"score_gpt":0.21170824066105373,"score_spread":0.20529145310413985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023033129","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986317,0.0000360582,0.0000055723563,0.00032857465,0.0004070717,0.00015690936,0.00001143759,0.000019175674,0.00040350616],"genre_scores_gemma":[0.9987148,0.00006747799,0.00065053994,0.0003611551,0.000012924061,0.000001960341,0.000030211577,0.000012476258,0.00014846986],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99859625,0.00019974001,0.0004017187,0.0003566538,0.000083814324,0.00036180054],"domain_scores_gemma":[0.9995501,0.000082772,0.00015356048,0.00013035568,0.000017998505,0.00006519295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032053862,0.00017825761,0.00027917966,0.000107966436,0.00006257138,0.000017000175,0.00012478486,0.0001904227,0.0007104711],"category_scores_gemma":[0.00013443404,0.00017261863,0.000047136895,0.00030436672,0.0002542822,0.00013741117,0.00008219953,0.00016585943,0.00013403746],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054799937,0.00010416496,0.07250097,0.00001548974,0.0000090384765,0.000007179506,0.00016451812,0.000080981496,0.9257905,0.000017547824,0.00037949524,0.0008753547],"study_design_scores_gemma":[0.0018204331,0.00009408308,0.25033972,0.000015937085,0.00001797581,0.000043775406,0.000032565535,0.00019250961,0.74630445,0.00010354757,0.0007703735,0.00026464948],"about_ca_topic_score_codex":0.00019960898,"about_ca_topic_score_gemma":0.005097137,"teacher_disagreement_score":0.17948602,"about_ca_system_score_codex":0.00017966567,"about_ca_system_score_gemma":0.00003712215,"threshold_uncertainty_score":0.777916},"labels":[],"label_agreement":null},{"id":"W2023167417","doi":"10.1021/es048464a","title":"Assessment of Degradation Pathways in an Aquifer with Mixed Chlorinated Hydrocarbon Contamination Using Stable Isotope Analysis","year":2005,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":124,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Chemistry; Groundwater; Environmental chemistry; Chlorinated solvents; Reductive dechlorination; Isotope analysis; Vinyl chloride; Degradation (telecommunications); Isotopes of carbon; Aquifer; Kinetic isotope effect; Contamination; Radionuclide; Hydrocarbon; Isotope; Stable isotope ratio; Chloride; Biodegradation; Total organic carbon; Organic chemistry; Geology; Deuterium","score_opus":0.01003320437224364,"score_gpt":0.23105845487164248,"score_spread":0.22102525049939883,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023167417","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980655,0.000006730537,0.0010830342,0.00008412095,0.000025342277,0.00026465577,0.000010852299,0.000034324858,0.00042547454],"genre_scores_gemma":[0.9952736,0.0000101653,0.0046126475,0.000032525106,0.0000045793927,0.0000059864688,0.000024564997,0.0000070826404,0.000028888253],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99829584,0.0000374448,0.0003112156,0.0005053071,0.0005037003,0.00034648695],"domain_scores_gemma":[0.99940455,0.000008008789,0.00020643529,0.0003009366,0.0000054813977,0.00007458577],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004888901,0.00014893427,0.0002069464,0.0006026438,0.0001255734,0.000020351514,0.0003738898,0.00010876461,0.00063331274],"category_scores_gemma":[0.000009335545,0.00012897699,0.000026897635,0.00277799,0.0009769497,0.00071769557,0.00017170077,0.00012610148,0.000018395513],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004893203,0.00015257459,0.42610076,4.783465e-7,0.0000041966937,0.0000011070954,0.000056124536,0.0040559517,0.5669351,0.000038061862,3.714666e-7,0.0026503636],"study_design_scores_gemma":[0.00031080857,0.00015555896,0.6165854,0.00000351181,0.000026340074,0.0000025447382,0.0003116962,0.04128126,0.34111777,0.000013846127,0.00005702422,0.0001342928],"about_ca_topic_score_codex":0.00015016618,"about_ca_topic_score_gemma":0.0013239335,"teacher_disagreement_score":0.22581734,"about_ca_system_score_codex":0.0011090755,"about_ca_system_score_gemma":0.000030187415,"threshold_uncertainty_score":0.69343305},"labels":[],"label_agreement":null},{"id":"W2023217311","doi":"10.1139/w02-057","title":"Occurrence of several genes encoding putative reductive dehalogenases in<i>Desulfitobacterium hafniense/frappieri</i>and<i>Dehalococcoides ethenogenes</i>","year":2002,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Biology; Cosmid; Gene; Genetics; Contig; Genome; Thiolase; Nucleic acid sequence","score_opus":0.017404283880352645,"score_gpt":0.20361364098677767,"score_spread":0.18620935710642503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023217311","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974693,0.0011160943,0.000021721144,0.00028343702,0.00038110014,0.00011418571,0.00042935996,0.0000026883713,0.0001821362],"genre_scores_gemma":[0.9988112,0.00034602545,0.0005102771,0.00024901563,0.000033517448,7.8708155e-7,0.000013915883,0.0000055498167,0.000029730543],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986968,0.0001569184,0.00050741184,0.00021792506,0.000052712992,0.0003682034],"domain_scores_gemma":[0.99912494,0.00007628136,0.00037198694,0.00010055816,0.00005816226,0.00026804197],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030044845,0.00016696392,0.0003224178,0.0001886624,0.00007439161,0.000014846999,0.00024751862,0.00013440185,0.0008971108],"category_scores_gemma":[0.00011174237,0.0001457507,0.000072015064,0.0002608876,0.00072038564,0.00014988924,0.000037148093,0.00018845903,0.000042617045],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019479423,0.000023608638,0.043048296,0.0000061564665,0.000018565694,0.000056973317,0.0023733275,0.00012457852,0.94945455,0.0000033487206,0.0021023438,0.0027687752],"study_design_scores_gemma":[0.0022808998,0.0008656481,0.07610936,0.00018213507,0.00007809929,0.002950384,0.002384942,0.00007629149,0.8708036,0.00014489234,0.043140654,0.0009831035],"about_ca_topic_score_codex":0.0013148444,"about_ca_topic_score_gemma":0.007040894,"teacher_disagreement_score":0.07865095,"about_ca_system_score_codex":0.00017802753,"about_ca_system_score_gemma":0.000108890345,"threshold_uncertainty_score":0.9822734},"labels":[],"label_agreement":null},{"id":"W2023307361","doi":"10.2166/wst.2000.0539","title":"Bioremediation of highly energetic compounds: a search for remediation technologies","year":2000,"lang":"en","type":"article","venue":"Water Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Mineralization (soil science); Chemistry; Bioremediation; Biotransformation; Phanerochaete; Biodegradation; Environmental chemistry; Toluene; Environmental remediation; Trinitrotoluene; Nuclear chemistry; Slurry; Organic chemistry; Contamination; Environmental engineering; Nitrogen","score_opus":0.009114141942880596,"score_gpt":0.22450531012726468,"score_spread":0.21539116818438409,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023307361","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943147,0.000016115544,0.00036806444,0.0036167696,0.00012588677,0.00036176466,0.000010979733,0.00028637776,0.0008993413],"genre_scores_gemma":[0.99638206,0.0000620107,0.0032432894,0.00005762784,0.0000123502405,0.00002189492,0.000013904399,0.000007360496,0.00019950105],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983492,0.000014310763,0.00031172993,0.00044052638,0.0003898398,0.0004943817],"domain_scores_gemma":[0.9994562,0.000017285643,0.00006645757,0.0003627812,0.00005556883,0.000041681287],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006051979,0.00012559233,0.00016084412,0.00046525477,0.0001993048,0.000025144745,0.0007752261,0.0001900509,0.00039321498],"category_scores_gemma":[0.000064471795,0.000089747664,0.000037346927,0.0015305283,0.0020928106,0.00027878044,0.00018537934,0.00009776674,0.00033079812],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014535102,0.000045374523,0.009508941,0.0000047906256,0.0000014526809,4.1100483e-7,0.00020886706,0.00009220777,0.95655155,0.00016719101,0.0001987137,0.033205982],"study_design_scores_gemma":[0.00026796875,0.00014205776,0.001812367,0.000005153244,0.000004825594,0.0000036950114,0.00013692862,0.000613189,0.9882239,0.0010660031,0.0075953235,0.00012856539],"about_ca_topic_score_codex":0.000029332788,"about_ca_topic_score_gemma":0.000020805419,"teacher_disagreement_score":0.033077415,"about_ca_system_score_codex":0.00015862235,"about_ca_system_score_gemma":0.000031303513,"threshold_uncertainty_score":0.7711048},"labels":[],"label_agreement":null},{"id":"W2023888231","doi":"10.1080/10889860601021449","title":"Phenanthrene Biodegradation in Soils Using an Antarctic Bacterial Consortium","year":2006,"lang":"en","type":"article","venue":"Bioremediation Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Rimouski","funders":"Instituto Antártico Argentino; Universidad de Buenos Aires; Canada Research Chairs","keywords":"Biostimulation; Phenanthrene; Bioaugmentation; Bioremediation; Environmental chemistry; Microcosm; Biodegradation; Chemistry; Bioavailability; Nutrient; Soil contamination; Contamination; Soil water; Environmental science; Biology; Ecology; Organic chemistry","score_opus":0.019263357199293105,"score_gpt":0.2396092037658355,"score_spread":0.22034584656654238,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023888231","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99787194,0.000014855208,0.0006419826,0.00024772552,0.00087496504,0.00013071718,0.000015342686,0.000022053295,0.00018040191],"genre_scores_gemma":[0.996964,0.000033271328,0.0021752547,0.000106224084,0.0005982145,9.0283936e-7,0.00008270756,0.000011373639,0.000028072052],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984681,0.00013270073,0.0005146457,0.00022256037,0.00036233768,0.00029967967],"domain_scores_gemma":[0.9994086,0.000017023372,0.00030366387,0.00011442578,0.000026028105,0.00013023108],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00053695077,0.00014173548,0.00013788759,0.00012489763,0.0001462516,0.00011909268,0.00014543638,0.0001030222,0.0029638945],"category_scores_gemma":[0.000047230867,0.00012363716,0.00004462873,0.00031353938,0.00010408681,0.0007162576,0.000029968094,0.00014617141,0.0001378166],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040017323,0.00017049891,0.16426638,0.0000017948779,0.0000022734332,0.000008563029,0.000092577386,0.0005920516,0.8315939,0.000008731008,0.0008016563,0.0024215817],"study_design_scores_gemma":[0.002653586,0.00014561128,0.8194223,0.000027582222,0.000026912743,0.00012319512,0.00012667855,0.008939485,0.163592,0.00049238576,0.0039115227,0.00053871435],"about_ca_topic_score_codex":0.0004033719,"about_ca_topic_score_gemma":0.0010068396,"teacher_disagreement_score":0.6680019,"about_ca_system_score_codex":0.00033624857,"about_ca_system_score_gemma":0.000057262656,"threshold_uncertainty_score":0.9979475},"labels":[],"label_agreement":null},{"id":"W2024102264","doi":"10.1016/j.chemosphere.2012.12.058","title":"Biodegradation of petroleum hydrocarbons in contaminated clayey soils from a sub-arctic site: The role of aggregate size and microstructure","year":2013,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Biodegradation; Nutrient; Environmental chemistry; Chemistry; Soil water; Adsorption; Environmental science; Soil science; Organic chemistry","score_opus":0.0023218405293662556,"score_gpt":0.1625292768614596,"score_spread":0.16020743633209333,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024102264","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988553,0.0002610931,0.0000011075632,0.00023811335,0.000025334437,0.00017930138,0.00003071713,0.000006974161,0.00040204552],"genre_scores_gemma":[0.999597,0.000058225563,0.00015543976,0.000086332155,0.000006123406,0.000002757798,0.000020664167,0.000006208231,0.00006721715],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99932283,0.000033528246,0.0002190316,0.00017588548,0.00011796129,0.00013075433],"domain_scores_gemma":[0.99956393,0.0000643561,0.00016242605,0.0001616318,0.000007736608,0.00003991921],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000066348824,0.00010311045,0.00014866117,0.000004645765,0.00002470235,0.000014327063,0.00012320877,0.000091149435,0.0011232307],"category_scores_gemma":[0.000046421857,0.00007166435,0.000028357603,0.00015203492,0.00020107473,0.00009374621,0.00006618383,0.00009182718,0.00004103294],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000122548,0.000019097744,0.18925276,0.000004273808,0.0000047736144,2.260232e-7,0.00033416602,0.0000028512006,0.80683595,9.182973e-7,0.00008915215,0.003443572],"study_design_scores_gemma":[0.00031989982,0.000015215436,0.4067233,0.000016806807,0.000007029036,8.3456655e-7,0.00021034312,0.0005161926,0.59170395,0.00030937017,0.00011579424,0.00006126582],"about_ca_topic_score_codex":0.00496697,"about_ca_topic_score_gemma":0.0015061349,"teacher_disagreement_score":0.21747054,"about_ca_system_score_codex":0.000040590257,"about_ca_system_score_gemma":0.000008797831,"threshold_uncertainty_score":0.9997899},"labels":[],"label_agreement":null},{"id":"W2024534259","doi":"10.1002/jctb.1390","title":"Full‐scale <i>in situ</i> bioremediation of hexachlorocyclohexane‐contaminated soil","year":2005,"lang":"en","type":"article","venue":"Journal of Chemical Technology & Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Hexachlorocyclohexane; Anoxic waters; Bioremediation; Lindane; Control area; Soil contamination; Environmental chemistry; Soil test; Contamination; Environmental science; Soil water; Animal science; Pesticide; Chemistry; Agronomy; Ecology; Biology; Soil science","score_opus":0.0036121063604979014,"score_gpt":0.20057240640285437,"score_spread":0.19696030004235646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024534259","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98722935,0.00017781327,0.000096311596,0.011817586,0.00011698178,0.00012146817,0.0000048647794,0.00007819807,0.00035742988],"genre_scores_gemma":[0.99565446,0.0002664166,0.0038026497,0.00018760987,0.00004775809,0.0000017383237,0.000003310145,0.000013355849,0.000022679522],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99804455,0.000029473129,0.0009885089,0.0002745237,0.00028016284,0.00038276814],"domain_scores_gemma":[0.9988053,0.000037335027,0.0007372275,0.00029579015,0.000049576975,0.000074790776],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037483004,0.00020106902,0.0005009446,0.0005322273,0.00002084079,0.000004861208,0.0006985956,0.0012071751,0.00029860588],"category_scores_gemma":[0.00023934363,0.00017487285,0.000116373856,0.0011369799,0.000859509,0.00015993624,0.00023946639,0.0007695357,0.00009553139],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001002901,0.0002465519,0.007288762,0.000005535113,0.000013344615,0.000010824885,0.000036299323,0.000010952834,0.94967824,0.00005233714,0.00061531557,0.041941572],"study_design_scores_gemma":[0.0010520718,0.00026617222,0.001303414,0.000026655696,0.000019448493,0.00019044953,0.00007744137,0.00005900639,0.98997414,0.00043204287,0.006438039,0.0001611152],"about_ca_topic_score_codex":0.0000087356375,"about_ca_topic_score_gemma":0.00013733911,"teacher_disagreement_score":0.041780457,"about_ca_system_score_codex":0.00027818725,"about_ca_system_score_gemma":0.00003022865,"threshold_uncertainty_score":0.9310839},"labels":[],"label_agreement":null},{"id":"W2024612138","doi":"10.1080/10406630108033062","title":"Sorption-Desorption of Pyrene for Colombia and New Mexico Soils","year":2001,"lang":"en","type":"article","venue":"Polycyclic aromatic compounds","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ecopetrol; University of Lethbridge","keywords":"Chemistry; Environmental chemistry; Desorption; Bioremediation; Sorption; Soil water; Pyrene; Environmental remediation; Bioavailability; Adsorption; Soil contamination; Contamination; Soil science; Environmental science; Organic chemistry; Ecology","score_opus":0.022586047219433945,"score_gpt":0.2455406041165713,"score_spread":0.22295455689713736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024612138","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951639,0.000037199636,0.001491849,0.0008470401,0.00012657016,0.00028161376,0.0000068423196,0.000034409455,0.0020105604],"genre_scores_gemma":[0.99599373,0.000059788927,0.0023690534,0.00021506233,0.000040213916,0.0000055796013,0.00002131266,0.000009630352,0.0012856524],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999102,0.000024320685,0.0003101225,0.00019440103,0.000172924,0.0001962297],"domain_scores_gemma":[0.99946636,0.000089160494,0.00015958452,0.000155731,0.0000023157263,0.0001268268],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016952677,0.00011794815,0.00018404858,0.000036023815,0.000077786644,0.000022962613,0.00011996356,0.00006487914,0.00039023993],"category_scores_gemma":[0.00004196583,0.00010785203,0.000051648833,0.00015000154,0.00012954099,0.00011330171,0.0000563589,0.00003817489,0.00007989345],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000071264905,0.0001298785,0.07291231,0.0000139732165,0.000019771089,5.575504e-7,0.0005182573,0.000008330092,0.89288944,0.00005676471,0.015145091,0.018234378],"study_design_scores_gemma":[0.0057790154,0.0007337683,0.78196377,0.00012403908,0.00015241926,0.00009491141,0.00033148855,0.012324363,0.115819626,0.027003206,0.054669555,0.0010038228],"about_ca_topic_score_codex":0.00033884132,"about_ca_topic_score_gemma":0.00027934925,"teacher_disagreement_score":0.7770698,"about_ca_system_score_codex":0.00005580192,"about_ca_system_score_gemma":0.000014066216,"threshold_uncertainty_score":0.4398078},"labels":[],"label_agreement":null},{"id":"W2025427183","doi":"10.1016/j.jhazmat.2013.03.029","title":"Simultaneous biodegradation of volatile and toxic contaminant mixtures by solid–liquid two-phase partitioning bioreactors","year":2013,"lang":"en","type":"article","venue":"Journal of Hazardous Materials","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Chemistry; Phenol; Bioreactor; Biodegradation; Chromatography; Degradation (telecommunications); Butyl acetate; Silicone rubber; Silicone oil; Phase (matter); Polymer; Chemical engineering; Organic chemistry; Solvent","score_opus":0.005768431061892305,"score_gpt":0.24174343979173596,"score_spread":0.23597500872984364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025427183","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990588,0.00008848521,0.00006718863,0.00017940332,0.0002910589,0.00016179217,0.000104524326,0.0000070987116,0.00004165024],"genre_scores_gemma":[0.99931765,0.00010093257,0.00035506362,0.00009558228,0.000056082357,0.0000011396285,0.000016372955,0.00000878438,0.000048405243],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987972,0.00008104587,0.0006177915,0.000114326154,0.00022641655,0.00016326009],"domain_scores_gemma":[0.9990172,0.00006421819,0.0006811621,0.00008320866,0.00004792285,0.000106300955],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00031535683,0.00012246481,0.0002830922,0.00004466591,0.00005554372,0.00007138445,0.000106297746,0.000064653075,0.0032519756],"category_scores_gemma":[0.0001214418,0.000088242254,0.000040080715,0.00006431733,0.00011798643,0.00027975638,0.000040891664,0.000050779377,0.0000566808],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011425873,0.00010312576,0.0005696931,0.000008780036,0.000013703484,0.0000052945597,0.00014781603,0.00002105872,0.9935553,0.0000019429863,0.003691488,0.0017675536],"study_design_scores_gemma":[0.000889186,0.0005284963,0.00089036924,0.000036054895,0.000023028288,0.000046787743,0.000051567113,0.0000773747,0.99642456,0.000023503766,0.0009011018,0.000107957094],"about_ca_topic_score_codex":0.0002283554,"about_ca_topic_score_gemma":0.000018035546,"teacher_disagreement_score":0.0031952949,"about_ca_system_score_codex":0.00004818044,"about_ca_system_score_gemma":0.00001442885,"threshold_uncertainty_score":0.9976592},"labels":[],"label_agreement":null},{"id":"W2025531238","doi":"10.1021/es0255711","title":"Field Demonstration of Successful Bioaugmentation To Achieve Dechlorination of Tetrachloroethene To Ethene","year":2002,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":501,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"U.S. Army Corps of Engineers; Environmental Security Technology Certification Program; U.S. Air Force; Battelle; U.S. Army; U.S. Department of Energy; U.S. Department of Defense","keywords":"Dehalococcoides; Bioaugmentation; Microcosm; Biostimulation; Chemistry; Reductive dechlorination; Bioremediation; Environmental chemistry; Biodegradation; Environmental remediation; Microbial consortium; Enrichment culture; Bacteria; Contamination; Organic chemistry; Microorganism; Vinyl chloride; Ecology; Biology","score_opus":0.008370558374104968,"score_gpt":0.22610482074535637,"score_spread":0.2177342623712514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025531238","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933376,0.000007497846,0.001531026,0.0026306526,0.00010558549,0.00036261746,0.000015542722,0.000031398547,0.0019781082],"genre_scores_gemma":[0.99544203,0.000041071624,0.0041742125,0.00022893588,0.000007659589,0.00000985923,0.0000028077873,0.0000059778517,0.000087430606],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99850446,0.000018516283,0.00034195796,0.0003818011,0.00048587084,0.0002674099],"domain_scores_gemma":[0.99942887,0.000023059492,0.00015773189,0.0002711064,0.0000073073365,0.00011190141],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00030560704,0.00012258868,0.00014197116,0.00036948582,0.00010675776,0.000008942306,0.00048692376,0.000111490655,0.0023989473],"category_scores_gemma":[0.00007424567,0.00011659225,0.00003065903,0.0015217768,0.0007748912,0.00026831805,0.00026308117,0.00008549588,0.00038437254],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017886212,0.00012451694,0.04591718,0.0000015777196,0.0000016486326,4.4554284e-7,0.00035594695,0.00016081432,0.8839461,0.00007987384,0.000064292486,0.06932968],"study_design_scores_gemma":[0.00015021133,0.0006897009,0.037159327,0.000007146798,0.0000050982712,0.000003595527,0.00034401333,0.00016733144,0.96044886,0.00010654857,0.0007948199,0.00012335838],"about_ca_topic_score_codex":0.000079548874,"about_ca_topic_score_gemma":0.00007050951,"teacher_disagreement_score":0.07650271,"about_ca_system_score_codex":0.00024342857,"about_ca_system_score_gemma":0.000005706739,"threshold_uncertainty_score":0.998513},"labels":[],"label_agreement":null},{"id":"W2025588696","doi":"10.1021/es803307y","title":"Isotopic Fractionation of Methyl <i>tert</i>-Butyl Ether Suggests Different Initial Reaction Mechanisms during Aerobic Biodegradation","year":2009,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Ontario","keywords":"Biodegradation; Chemistry; Ether; Methyl tert-butyl ether; Alkoxy group; Alcohol; Organic chemistry; Fractionation; Environmental chemistry; Alkyl","score_opus":0.005386835309763433,"score_gpt":0.2226065025744331,"score_spread":0.21721966726466965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025588696","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99701566,0.000012643804,0.0006716783,0.0010902665,0.00021299803,0.00028554542,0.000009025086,0.000091969545,0.0006102222],"genre_scores_gemma":[0.9984889,0.000045407953,0.0010934039,0.0001703463,0.000016582198,0.0000070463598,0.000018308638,0.000007710011,0.00015230627],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998211,0.000035889483,0.00033352635,0.0005091646,0.0005632964,0.0003470904],"domain_scores_gemma":[0.99935126,0.000012508194,0.00025360542,0.00029596925,0.00000550437,0.00008113005],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00024751833,0.0001881585,0.0001703709,0.000319096,0.00025936955,0.000019895466,0.0003810473,0.00019522551,0.0011700481],"category_scores_gemma":[0.000033538217,0.00016744545,0.000050495448,0.00072731054,0.0007263403,0.0005198331,0.00015224486,0.00019574889,0.0002363183],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014978912,0.00016968464,0.004089649,0.0000010843283,0.0000022622373,0.0000016117797,0.00007568836,0.000021752385,0.9824862,0.00025500872,0.000015491878,0.012866597],"study_design_scores_gemma":[0.00028533567,0.00015203947,0.20028135,0.000005841576,0.0000071310715,0.000016321073,0.00010734257,0.00007219398,0.7970845,0.0014899141,0.0003510985,0.00014691026],"about_ca_topic_score_codex":0.00002986495,"about_ca_topic_score_gemma":0.000019239847,"teacher_disagreement_score":0.1961917,"about_ca_system_score_codex":0.00061291124,"about_ca_system_score_gemma":0.000010622277,"threshold_uncertainty_score":0.99974304},"labels":[],"label_agreement":null},{"id":"W2026562028","doi":"10.1128/jb.184.14.3794-3800.2002","title":"Family Shuffling of a Targeted <i>bphA</i> Region To Engineer Biphenyl Dioxygenase","year":2002,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":83,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Shuffling; Biphenyl; Thermococcus; Gene; Biochemistry; Microbiology; Archaea; Chemistry","score_opus":0.01564465612182187,"score_gpt":0.20172739731182532,"score_spread":0.18608274119000345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2026562028","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99809104,0.00008826923,0.00041054082,0.0005378916,0.00035560384,0.00006320655,0.0000057586335,0.000005627105,0.00044204484],"genre_scores_gemma":[0.99690956,0.00012580391,0.0018923946,0.0008331568,0.000089856396,3.1153493e-7,0.0000011535692,0.000006888298,0.00014089706],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99911064,0.000055631146,0.00043659483,0.00010436028,0.00012472439,0.00016803882],"domain_scores_gemma":[0.99942815,0.000029807203,0.00028223457,0.00010374548,0.000026979274,0.00012905082],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018262472,0.00009262377,0.00023146128,0.000074333904,0.00002110364,0.0000059156505,0.00018046287,0.00007969564,0.0012427665],"category_scores_gemma":[0.0000802424,0.00007112333,0.00008448547,0.00018019596,0.00005731006,0.000097822725,0.000051639487,0.00011404789,0.00015232815],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042815653,0.00005146485,0.008074844,0.0000029661392,0.000011472546,0.00001990221,0.0002147863,0.00015372997,0.98257756,0.0000019006278,0.006760855,0.0020876918],"study_design_scores_gemma":[0.0022061456,0.0018635115,0.5273209,0.000091483824,0.000051036895,0.00052306143,0.00014702659,0.0006550118,0.2877749,0.000043602184,0.17876557,0.0005577788],"about_ca_topic_score_codex":0.000017985147,"about_ca_topic_score_gemma":0.000006008666,"teacher_disagreement_score":0.6948027,"about_ca_system_score_codex":0.00005841198,"about_ca_system_score_gemma":0.000006216245,"threshold_uncertainty_score":0.9996702},"labels":[],"label_agreement":null},{"id":"W2026563404","doi":"10.1128/aem.69.1.483-489.2003","title":"Changes in Microbial Community Composition and Function during a Polyaromatic Hydrocarbon Phytoremediation Field Trial","year":2003,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":315,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Biotechnology Research Institute","funders":"","keywords":"Rhizosphere; Phytoremediation; Mineralization (soil science); Bulk soil; Microbial population biology; Environmental chemistry; Soil microbiology; Biology; Microbial biodegradation; Soil contamination; Sphingomonas; Phenanthrene; Chemistry; Botany; Agronomy; Pseudomonas; Soil water; Microorganism; Bacteria; Ecology","score_opus":0.0057233490284467935,"score_gpt":0.17313205889062339,"score_spread":0.1674087098621766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2026563404","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998859,0.000028177308,0.000011292149,0.000083416744,0.0001221514,0.00039271213,0.0000149452235,0.000015547497,0.000472757],"genre_scores_gemma":[0.9991739,0.0000980944,0.00007958886,0.00047075422,0.000025352292,0.000013856,0.00010883096,0.000008627623,0.000021006515],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991772,0.00014057457,0.00018910287,0.00023815359,0.000039672803,0.00021525011],"domain_scores_gemma":[0.99971324,0.000046644043,0.000080569036,0.00010558616,3.914531e-7,0.00005356427],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018595114,0.00015378562,0.00016444041,0.000045121906,0.00015780097,0.000013251444,0.000053035543,0.0001521456,0.0003194777],"category_scores_gemma":[0.0000053219915,0.00014989504,0.000016553593,0.000060595754,0.00016945235,0.00005048642,0.000086065505,0.0001891362,0.000042128628],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00076237146,0.00012652279,0.011241837,0.000008532427,0.0000055118244,6.223873e-7,0.00028073357,0.000002566274,0.9868827,0.000011539884,0.00003369583,0.0006433997],"study_design_scores_gemma":[0.021245308,0.0006881841,0.13918875,0.00001734686,0.000035393015,0.000069384005,0.0006431527,0.00002070949,0.83615994,0.00022240501,0.001201074,0.00050835137],"about_ca_topic_score_codex":0.00008092824,"about_ca_topic_score_gemma":0.000343454,"teacher_disagreement_score":0.15072274,"about_ca_system_score_codex":0.000097116055,"about_ca_system_score_gemma":0.0000022002635,"threshold_uncertainty_score":0.6112542},"labels":[],"label_agreement":null},{"id":"W2026627165","doi":"10.1139/w03-116","title":"Crude-oil-degrading thermophilic bacterium isolated from an oil field","year":2004,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Ministry of Science and Technology of the People's Republic of China","keywords":"Thermophile; Chemistry; Thermus; Phthalate; Hexadecane; Maltose; Bacteria; Strain (injury); Glycerol; Xylose; Mesophile; Chromatography; Organic chemistry; Fermentation; Food science; Sucrose; Biology; Enzyme","score_opus":0.008140273821103954,"score_gpt":0.19840209001595605,"score_spread":0.19026181619485208,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2026627165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99567634,0.00011415199,0.00002319407,0.0024883086,0.00068007316,0.000016704671,0.00008690305,0.0000066514463,0.0009076522],"genre_scores_gemma":[0.99620134,0.00004821097,0.00035006847,0.0030125617,0.00013372468,1.9013187e-7,0.000031758416,0.00001102162,0.00021111048],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99903566,0.00007247121,0.00033101364,0.00017811179,0.00003734174,0.00034542964],"domain_scores_gemma":[0.99914783,0.000025803143,0.00019171672,0.00014868354,0.000023333516,0.00046265736],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015728053,0.00013624123,0.00019742115,0.00008444256,0.00010575214,0.000033058855,0.000378451,0.00019416651,0.0068131373],"category_scores_gemma":[0.00004600327,0.000114031456,0.00007574198,0.00012767015,0.00014464329,0.00015208834,0.000020191559,0.00024052252,0.00034346015],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021655444,0.000015014018,0.005734213,0.0000010515153,0.000016438215,0.00006981658,0.00047707898,0.000021404781,0.9855519,0.0000043219484,0.0016574017,0.006429693],"study_design_scores_gemma":[0.0044046044,0.0016338985,0.06043111,0.00017554575,0.00011482651,0.0020095452,0.00052390224,0.000018249544,0.61578876,0.0005780825,0.31301674,0.001304703],"about_ca_topic_score_codex":0.013739796,"about_ca_topic_score_gemma":0.08457484,"teacher_disagreement_score":0.36976314,"about_ca_system_score_codex":0.00029260694,"about_ca_system_score_gemma":0.00020657828,"threshold_uncertainty_score":0.9940948},"labels":[],"label_agreement":null},{"id":"W2027019869","doi":"10.1002/cjce.5450840412","title":"Reaction Engineering Studies on the Biodegradation of Anthracene on Bioremediation of Diesel Contaminated Soil Using <i>Acinetobacter</i> sp. (ATCC No. 14293)","year":2006,"lang":"en","type":"article","venue":"The Canadian Journal of Chemical Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Bioremediation; Biodegradation; Anthracene; Soil contamination; Chemistry; Environmental chemistry; Bioprocess; Hydrocarbon; Diesel fuel; Polycyclic aromatic hydrocarbon; Environmental remediation; Strain (injury); Microcosm; Methanol; Contamination; Environmental science; Organic chemistry; Chemical engineering; Soil science; Soil water; Ecology; Biology","score_opus":0.013594690090932535,"score_gpt":0.19525008887965095,"score_spread":0.18165539878871842,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027019869","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990775,0.00005396568,0.00003693803,0.00034577944,0.00033736104,0.00008462837,0.000014440469,0.000005582069,0.000043824373],"genre_scores_gemma":[0.9996769,0.000014043423,0.00013384141,0.00003851677,0.000113217975,5.077423e-7,0.000005014619,0.000010720357,0.0000072683642],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990613,0.000018586803,0.0004251536,0.00008390921,0.00024243501,0.00016861354],"domain_scores_gemma":[0.99926656,0.00013358319,0.00032812404,0.000114698894,0.00007887678,0.000078172816],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037469127,0.00012614825,0.00018877487,0.00008648332,0.00004518201,0.0000119176675,0.00015871771,0.00006374931,0.000026500345],"category_scores_gemma":[0.00036310506,0.00007998446,0.00006440748,0.00024567265,0.000095156734,0.000087839515,0.0000129741375,0.00019072085,0.0000055949213],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001712376,0.000012300167,0.00062604155,0.000013172283,0.000021451628,0.0000014901802,0.00011387894,0.031896852,0.96696323,0.000035956076,0.00019260246,0.00010589377],"study_design_scores_gemma":[0.00021109715,0.000052428215,0.003950137,0.00013706108,0.000024839017,0.0000061970177,0.000026731506,0.0120093925,0.98331136,0.000007889984,0.00017114797,0.00009170683],"about_ca_topic_score_codex":0.001613097,"about_ca_topic_score_gemma":0.00040944404,"teacher_disagreement_score":0.019887459,"about_ca_system_score_codex":0.00035797377,"about_ca_system_score_gemma":0.00004002147,"threshold_uncertainty_score":0.32616714},"labels":[],"label_agreement":null},{"id":"W2027369267","doi":"10.1023/b:wate.0000009903.22105.30","title":"Effects of Nutrient Amendments and Temperature on the Biodegradation of Pentachlorophenol Contaminated Soil","year":2003,"lang":"en","type":"article","venue":"Water Air & Soil Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nova Scotia Department of Agriculture","funders":"U.S. Environmental Protection Agency","keywords":"Pentachlorophenol; Compost; Amendment; Nutrient; Biodegradation; Environmental chemistry; Chemistry; Fertilizer; Soil contamination; Nitrate; Manure; Ammonium; Contamination; Biostimulation; Environmental science; Agronomy; Bioremediation; Soil water; Ecology; Soil science; Biology","score_opus":0.003997255142668083,"score_gpt":0.1747646714928961,"score_spread":0.17076741635022802,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027369267","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99875945,0.00002165778,0.000010371915,0.000386522,0.0001209344,0.00030096067,0.000016060798,0.000008981829,0.00037509066],"genre_scores_gemma":[0.9993991,0.000038579343,0.00001408086,0.0002928239,0.000006540692,0.00000482417,0.000016166287,0.0000055620603,0.00022230882],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99917024,0.00011755081,0.00018684316,0.00016641286,0.00021036556,0.00014856266],"domain_scores_gemma":[0.99973,0.000017265254,0.00008839774,0.000115187206,0.0000115587045,0.00003760075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018317843,0.000109315304,0.00011111909,0.000028105413,0.000078881385,0.000008163301,0.000069127454,0.00006636521,0.00017484704],"category_scores_gemma":[0.000022143815,0.000060689617,0.000032276686,0.00010626925,0.0001401476,0.00007654381,0.00003117883,0.000065427805,0.00006211499],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003742581,0.00012130215,0.0015847568,0.000017575863,0.000008906211,5.223814e-7,0.00048033847,0.000026020218,0.99680823,0.00013533371,0.0004427548,0.0003368229],"study_design_scores_gemma":[0.0005892001,0.00013043723,0.03686285,0.00002599111,0.000014872025,0.000001173561,0.000070287366,0.000026204907,0.9617355,0.00008249038,0.00038634677,0.00007468274],"about_ca_topic_score_codex":0.00011982144,"about_ca_topic_score_gemma":0.000028160492,"teacher_disagreement_score":0.035278093,"about_ca_system_score_codex":0.00007122518,"about_ca_system_score_gemma":0.0000050012477,"threshold_uncertainty_score":0.24748509},"labels":[],"label_agreement":null},{"id":"W2027753001","doi":"10.1139/s04-054","title":"Reduction of hydraulic conductivity changes in an in-ground bioreactor","year":2005,"lang":"en","type":"article","venue":"Journal of Environmental Engineering and Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Directorate-General for the Environment","keywords":"Hydraulic conductivity; Naphthalene; Bioreactor; Biodegradation; Biomass (ecology); Volume (thermodynamics); Conductivity; Chemical engineering; Hydraulic retention time; Bioremediation; Materials science; Environmental engineering; Chemistry; Environmental chemistry; Wastewater; Environmental science; Soil water; Soil science; Geology; Organic chemistry","score_opus":0.009754956852082405,"score_gpt":0.20617141708919134,"score_spread":0.19641646023710893,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027753001","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996578,0.000041733132,0.000007641673,0.00012480421,0.00008445859,0.000039793085,0.0000021667834,0.0000018298157,0.00003979256],"genre_scores_gemma":[0.99909014,0.000096300064,0.0007573633,0.000014763432,0.000028429151,2.2219314e-7,2.2914637e-7,0.0000028832253,0.000009658563],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99931526,0.000011416527,0.00019555796,0.00011978649,0.0002250958,0.00013290031],"domain_scores_gemma":[0.9997426,0.000008508946,0.000103305516,0.0000617247,0.000001665858,0.00008217468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048590405,0.000066299086,0.00010723054,0.00013331034,0.00001792727,0.000011688477,0.00011924144,0.000028844845,0.00012631738],"category_scores_gemma":[0.000017133021,0.000057012163,0.000013225606,0.00020116578,0.00023399387,0.000586828,0.000041102518,0.00009975219,0.0000031574675],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007307189,0.00008476442,0.023650806,0.0000017245259,5.085266e-7,0.0000015558795,0.00038472432,0.0029625094,0.96783185,0.0000018471793,0.0000023549132,0.0050700204],"study_design_scores_gemma":[0.00029178988,0.00013711592,0.7743872,0.00001643586,0.000001998655,0.000049447593,0.00015771463,0.0027237267,0.22182454,0.0000038787534,0.00032066612,0.00008551211],"about_ca_topic_score_codex":0.000021748216,"about_ca_topic_score_gemma":0.000043914333,"teacher_disagreement_score":0.75073636,"about_ca_system_score_codex":0.0001895885,"about_ca_system_score_gemma":0.000006998919,"threshold_uncertainty_score":0.23248886},"labels":[],"label_agreement":null},{"id":"W2027869390","doi":"10.1016/j.watres.2005.11.030","title":"Biokinetics of biodegradation of surfactants under aerobic, anoxic and anaerobic conditions","year":2006,"lang":"en","type":"article","venue":"Water Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":178,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Biodegradation; Respirometer; Anoxic waters; Anaerobic exercise; Chemistry; Nitrate; Rhamnolipid; Denitrification; Bioreactor; Environmental chemistry; Pulp and paper industry; Oxygen; Organic chemistry; Nitrogen; Bacteria; Biology","score_opus":0.035470784778556336,"score_gpt":0.2968236002013653,"score_spread":0.26135281542280897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027869390","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983473,0.00001780548,0.000021808042,0.00030541758,0.00002499454,0.0001632627,0.000050425937,0.0000073728042,0.0010616524],"genre_scores_gemma":[0.9990217,0.000032816,0.00030847924,0.000013497121,0.0000081846165,0.0000013086088,0.00008065106,0.0000061127375,0.0005272347],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99893147,0.00009720872,0.00022792774,0.00017047217,0.00034627356,0.00022666903],"domain_scores_gemma":[0.9997015,0.000019809662,0.00004026912,0.00015097293,0.000041248288,0.000046171463],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00037361556,0.000067940215,0.00010429609,0.00009523621,0.00006745746,0.000014536175,0.000115172414,0.00006228238,0.0015508385],"category_scores_gemma":[0.000010871262,0.000048103866,0.000020616519,0.00026087274,0.000513018,0.000094228926,0.00011840551,0.000079213736,0.0001227744],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000093769495,0.0000711622,0.02558217,0.0000102573,0.0000032627909,5.936915e-7,0.00006505506,0.000037697293,0.97261065,0.00012107899,0.0013805187,0.000108197564],"study_design_scores_gemma":[0.00021945834,0.00006226021,0.15304168,0.0000075974394,0.0000028495701,0.0000012900839,0.000043706055,0.000054415414,0.8453599,0.00067007844,0.00047955726,0.000057201007],"about_ca_topic_score_codex":0.0010918592,"about_ca_topic_score_gemma":0.00040801012,"teacher_disagreement_score":0.12745951,"about_ca_system_score_codex":0.00003912571,"about_ca_system_score_gemma":0.000008085673,"threshold_uncertainty_score":0.9993619},"labels":[],"label_agreement":null},{"id":"W2028180412","doi":"10.5539/jas.v7n4p174","title":"Biodegradation of Petroleum Hydrocarbons in a Tropical Ultisol Using Legume Plants and Organic Manure","year":2015,"lang":"en","type":"article","venue":"Journal of Agricultural Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Legume; Gliricidia sepium; Leucaena leucocephala; Gliricidia; Green manure; Ultisol; Agronomy; Leucaena; Manure; Chicken manure; Biology; Germination; Environmental science; Soil water; Ecology","score_opus":0.01511822429511948,"score_gpt":0.22188874833496772,"score_spread":0.20677052403984825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028180412","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99937856,0.000030289895,0.000021625498,0.00025509542,0.00011578123,0.00004383741,0.0000016774703,0.0000020681189,0.0001510667],"genre_scores_gemma":[0.9991254,0.000020153833,0.0007853167,0.000021000478,0.000024492303,5.7855893e-8,3.8303594e-7,0.0000011525677,0.000022015924],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99898493,0.000027857453,0.00027555335,0.000111745605,0.00045086697,0.00014901799],"domain_scores_gemma":[0.9995346,0.000010933916,0.00024351965,0.00004141487,0.000017600743,0.0001519163],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002882012,0.000068076704,0.00012519775,0.00005628508,0.000038592512,0.00002811496,0.00019259207,0.0000352755,0.000028304861],"category_scores_gemma":[0.00007376286,0.00003800653,0.00002125099,0.0003933965,0.00022533322,0.0004993055,0.00006351748,0.00009474459,0.0000060768184],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010576986,0.00002858472,0.12633336,7.678295e-7,9.977933e-7,0.0000031719064,0.0003020886,0.00005132393,0.8729769,0.0000019698261,0.00008897084,0.00020131975],"study_design_scores_gemma":[0.00039849043,0.00011860242,0.93764335,0.00002326433,0.0000040235,0.00023597939,0.00055324973,0.00037308232,0.06052247,0.000019794283,0.000037137375,0.00007054381],"about_ca_topic_score_codex":0.000073257936,"about_ca_topic_score_gemma":0.00012816876,"teacher_disagreement_score":0.8124544,"about_ca_system_score_codex":0.00018702917,"about_ca_system_score_gemma":0.00003961491,"threshold_uncertainty_score":0.15498613},"labels":[],"label_agreement":null},{"id":"W2028370061","doi":"10.1186/1471-2164-13-327","title":"Comparative metagenomics of three Dehalococcoides-containing enrichment cultures: the role of the non-dechlorinating community","year":2012,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":114,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; University of Toronto","funders":"Strategic Environmental Research and Development Program; Genome Atlantic; University of Toronto; Dalhousie University; Ontario Genomics; Canada Research Chairs; Ontario Genomics Institute; Government of Canada; Genome Canada; Joint Genome Institute; U.S. Department of Energy; U.S. Department of Defense","keywords":"Metagenomics; Dehalococcoides; Biology; Firmicutes; Archaea; Proteobacteria; Clostridia; Microbiology; Computational biology; Bacteria; Genetics; Gene; 16S ribosomal RNA","score_opus":0.037448505130014874,"score_gpt":0.25861309496668544,"score_spread":0.22116458983667056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028370061","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99475825,0.00011467651,0.00015632302,0.000018324208,0.00011770195,0.00036690722,0.000024085457,0.0000053282756,0.0044383854],"genre_scores_gemma":[0.9978125,0.000012358093,0.0020274073,0.00007446124,0.000030167137,0.000004692025,0.0000038422368,0.000006814615,0.000027761456],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990413,0.00016657732,0.00031971696,0.0000888817,0.00016959893,0.0002138947],"domain_scores_gemma":[0.9990226,0.00015568479,0.0003655684,0.00039092975,0.000017911185,0.000047274825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008836019,0.00012426816,0.00019376582,0.000011439448,0.00026735628,0.000011954583,0.0005789044,0.000050744224,0.000092205686],"category_scores_gemma":[0.00004240238,0.00007112299,0.000101617145,0.00014760859,0.00023942538,0.000084112726,0.00046437752,0.0002038319,0.000033905384],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020268852,0.000106842424,0.32205006,0.000005990711,0.000023623164,1.316275e-8,0.013350259,0.0006197881,0.6630706,0.00015589662,0.000054027514,0.0005426076],"study_design_scores_gemma":[0.00025483058,0.000047504123,0.42877746,0.000008192787,0.000043900513,0.0000016016553,0.010366918,0.00060363585,0.5561967,0.00024701704,0.0033189738,0.00013328208],"about_ca_topic_score_codex":0.0007667945,"about_ca_topic_score_gemma":0.0021209542,"teacher_disagreement_score":0.106873944,"about_ca_system_score_codex":0.0001600547,"about_ca_system_score_gemma":0.000025851761,"threshold_uncertainty_score":0.29003114},"labels":[],"label_agreement":null},{"id":"W2029355973","doi":"10.1081/ese-100102612","title":"EFFECT OF BIOAUGMENTATION ON MICROBIAL TRANSPORT, WATER INFILTRATION, MOISTURE LOSS, AND SURFACE HARDNESS IN PRISTINE AND CONTAMINATED SOILS","year":2001,"lang":"en","type":"article","venue":"Journal of Environmental Science and Health Part A","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Loam; Infiltration (HVAC); Soil water; Bioaugmentation; Water content; Environmental science; Moisture; Soil science; Soil classification; Contamination; Chemistry; Geology; Geotechnical engineering; Bioremediation; Materials science; Ecology","score_opus":0.008393020313829153,"score_gpt":0.25296504465128195,"score_spread":0.2445720243374528,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029355973","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983906,0.000085337306,0.0000045249576,0.0011540087,0.00008160085,0.00022966602,0.000012666012,0.0000017354104,0.000039861367],"genre_scores_gemma":[0.9983529,0.0011719512,0.000059251397,0.00035536295,0.000015188054,4.8808107e-7,0.0000049755213,0.0000034773643,0.000036406524],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987959,0.00006825825,0.00040978234,0.00018663355,0.00032596386,0.00021343338],"domain_scores_gemma":[0.9995457,0.000020364305,0.00021507722,0.000052304546,0.000005419374,0.00016114695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016935309,0.00011008581,0.00021327783,0.000056914883,0.00012732035,0.000016776336,0.00007259298,0.00004416777,0.0001447188],"category_scores_gemma":[0.000009968766,0.000072858194,0.000015942402,0.00012775882,0.00066554383,0.00030191892,0.000029737525,0.00010911712,0.0000039408314],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014521937,0.00007725689,0.49450752,0.00002198911,0.0000021299236,0.000007691478,0.0007338333,0.000027919004,0.5001706,9.544023e-7,0.00011255878,0.004192353],"study_design_scores_gemma":[0.0014652397,0.0010507294,0.8881004,0.00006014825,0.0000080297,0.00007578048,0.00010581958,0.000047314392,0.10769052,0.0000048627626,0.0012962611,0.000094895506],"about_ca_topic_score_codex":0.00012375899,"about_ca_topic_score_gemma":0.00015741205,"teacher_disagreement_score":0.39359286,"about_ca_system_score_codex":0.00015572809,"about_ca_system_score_gemma":0.000021038557,"threshold_uncertainty_score":0.29710707},"labels":[],"label_agreement":null},{"id":"W2030435336","doi":"10.1139/l00-033","title":"Bioremediation of diesel fuel contaminated soil","year":2001,"lang":"en","type":"article","venue":"Canadian Journal of Civil Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; U.S. Environmental Protection Agency","keywords":"Bioremediation; Diesel fuel; Environmental science; Soil contamination; Contamination; Environmental chemistry; Biostimulation; Petroleum; Environmental engineering; Waste management; Soil water; Soil science; Chemistry; Ecology","score_opus":0.005848581998939446,"score_gpt":0.16687496280598735,"score_spread":0.1610263808070479,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2030435336","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953742,0.00017303997,0.0007303421,0.00019906691,0.00045978872,0.000048165122,0.00000991291,0.0000060209763,0.0029994876],"genre_scores_gemma":[0.99964905,0.00006507111,0.00009063443,0.000045475736,0.000054384374,1.7329457e-7,0.0000021065762,0.0000075625003,0.00008555097],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99933755,0.000009540105,0.00027200862,0.000058744183,0.00013907997,0.00018306014],"domain_scores_gemma":[0.99945515,0.000017630646,0.00013892377,0.00006551613,0.000033528697,0.00028925604],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00019993554,0.0000753207,0.00012533228,0.00012470913,0.00002051525,0.000011509545,0.00013673595,0.000051028714,0.0017761663],"category_scores_gemma":[0.0001228455,0.00006999032,0.000047700803,0.00024132445,0.000042364278,0.0001388386,0.0000080647715,0.000093405215,0.000027639877],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023424023,0.00003442491,0.24874644,0.000047071884,0.00005938166,0.00018599293,0.0016306762,0.03436924,0.7007246,0.00006315563,0.01009846,0.004017138],"study_design_scores_gemma":[0.0019290785,0.00030591874,0.810631,0.00021695255,0.00006410049,0.00028071576,0.0002644489,0.009160107,0.049732372,0.00009263427,0.12668405,0.0006386504],"about_ca_topic_score_codex":0.0011943835,"about_ca_topic_score_gemma":0.14282864,"teacher_disagreement_score":0.6509922,"about_ca_system_score_codex":0.00016027162,"about_ca_system_score_gemma":0.00007426603,"threshold_uncertainty_score":0.9991363},"labels":[],"label_agreement":null},{"id":"W2030641881","doi":"10.1080/20018891079302","title":"Bioremediation of DDT-Contaminated Soils: A Review","year":2001,"lang":"en","type":"review","venue":"Bioremediation Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":158,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Northern Alberta Institute of Technology; University of Alberta","funders":"","keywords":"Bioremediation; Environmental chemistry; Environmental science; Soil water; Contamination; Soil contamination; Chemistry; Biology; Ecology; Soil science","score_opus":0.03672824091302212,"score_gpt":0.30675529656426986,"score_spread":0.27002705565124774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2030641881","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000057603982,0.9959858,0.00010140433,0.000167681,0.0012687688,0.0012494656,0.00009732003,0.000046675454,0.0010252829],"genre_scores_gemma":[0.00003860438,0.9978661,0.000389889,0.00028868055,0.0005589329,0.000027748152,0.00038316267,0.000056669483,0.00039022084],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9951782,0.000498951,0.002245947,0.0004936223,0.0010853661,0.0004978617],"domain_scores_gemma":[0.99570847,0.00013285049,0.003233281,0.0004300432,0.00013121092,0.00036415958],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0016751083,0.0005869288,0.001697993,0.00031992808,0.00014070621,0.000058492442,0.00070275663,0.0005137926,0.008000025],"category_scores_gemma":[0.00062749407,0.00044523622,0.0007469076,0.0016000719,0.00019721006,0.0003449189,0.0001474024,0.00066042674,0.0016525027],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004776277,0.00011976882,0.00013278142,0.0040941527,0.00006814617,0.000016779146,0.00004122732,9.086349e-7,0.00012779565,0.000002911117,0.04411081,0.95127994],"study_design_scores_gemma":[0.0003430648,0.000086534375,0.00013340937,0.011915145,0.000660013,0.00018685246,0.000009504998,0.000009654937,0.000054214426,0.000012576752,0.98612183,0.00046718123],"about_ca_topic_score_codex":0.000013507893,"about_ca_topic_score_gemma":0.000022018934,"teacher_disagreement_score":0.95081276,"about_ca_system_score_codex":0.00060352025,"about_ca_system_score_gemma":0.00027721218,"threshold_uncertainty_score":0.99979997},"labels":[],"label_agreement":null},{"id":"W2030662614","doi":"10.1021/es048592z","title":"Stable Isotope Evidence for Biodegradation of Chlorinated Ethenes at a Fractured Bedrock Site","year":2005,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biodegradation; Reductive dechlorination; Environmental chemistry; Chemistry; Bedrock; Vinyl chloride; Groundwater; Dissolution; Contamination; Isotope analysis; Geology; Organic chemistry; Ecology; Geotechnical engineering; Geomorphology","score_opus":0.015919044908610378,"score_gpt":0.2517472558011078,"score_spread":0.23582821089249742,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2030662614","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971583,0.00019205397,0.00034550697,0.0014478244,0.00008334432,0.00050028274,0.000051376563,0.000067936795,0.00015338238],"genre_scores_gemma":[0.99508435,0.000161986,0.0037611001,0.00019401878,0.000017408967,0.000022046048,0.00001512967,0.000009668217,0.00073427666],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982588,0.000015113751,0.00030933396,0.00055589265,0.00041743563,0.00044339916],"domain_scores_gemma":[0.99928087,0.00004161599,0.00022082367,0.0003585812,0.000006450134,0.00009166287],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00041124414,0.00016897735,0.00017335023,0.00018619778,0.00030161123,0.000014856131,0.0005766765,0.00015706192,0.0023386215],"category_scores_gemma":[0.0001111345,0.00014665326,0.000051004783,0.0008154386,0.0015396575,0.00057247415,0.00049341674,0.00009665069,0.0006099658],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037326037,0.000089664776,0.07345159,0.000003161006,0.0000021861083,3.113965e-7,0.0001544158,0.0001389183,0.91570413,0.000018955585,0.00024484037,0.010154511],"study_design_scores_gemma":[0.00031498878,0.0001511336,0.04496065,0.000011093964,0.000008900142,0.0000057157336,0.00005587515,0.0006996497,0.9180206,0.00009074686,0.035502713,0.00017793811],"about_ca_topic_score_codex":0.00006156277,"about_ca_topic_score_gemma":0.00012349362,"teacher_disagreement_score":0.035257872,"about_ca_system_score_codex":0.0007461343,"about_ca_system_score_gemma":0.000017636643,"threshold_uncertainty_score":0.99857336},"labels":[],"label_agreement":null},{"id":"W2030867083","doi":"10.1016/s0043-1354(00)00181-0","title":"Column studies of biodegradation of mixtures of tetrachloroethene and carbon tetrachloride","year":2000,"lang":"en","type":"article","venue":"Water Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biodegradation; Carbon tetrachloride; Chemistry; Column (typography); Environmental chemistry; Chromatography; Carbon fibers; Organic chemistry; Materials science","score_opus":0.06027224125368807,"score_gpt":0.3325270021637293,"score_spread":0.27225476091004125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2030867083","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99798083,0.00015058693,1.9359845e-7,0.00016765109,0.000018962226,0.00014541214,0.000015217108,0.000003458713,0.0015176776],"genre_scores_gemma":[0.99869317,0.00041079617,0.00010060437,0.000006212134,0.000008495619,0.0000016522656,0.000004727392,0.000003957798,0.0007704016],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99895704,0.00008797967,0.0002343811,0.00014161038,0.00040951982,0.00016945177],"domain_scores_gemma":[0.99972045,0.000035156936,0.000034507473,0.00013102319,0.00004342437,0.000035424804],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00076638936,0.000055808247,0.0001453639,0.000061044084,0.00003338471,0.000004205128,0.00011513556,0.000045027115,0.00089036336],"category_scores_gemma":[0.000050521186,0.00003643371,0.000019904799,0.0001772423,0.0006182208,0.000051031177,0.00008071414,0.00007905308,0.000015926551],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006287129,0.000057866644,0.032519702,0.00004484398,0.000012138478,6.2135905e-7,0.0014089328,0.0000050573317,0.95894194,0.0000026462599,0.0002629582,0.006680447],"study_design_scores_gemma":[0.00017898092,0.0001242882,0.027545894,0.00001625751,0.000003811871,6.974425e-7,0.0001770803,0.000029872783,0.9712086,0.00010725553,0.00056728657,0.000040016585],"about_ca_topic_score_codex":0.0013137055,"about_ca_topic_score_gemma":0.00018811222,"teacher_disagreement_score":0.012266643,"about_ca_system_score_codex":0.000026131815,"about_ca_system_score_gemma":0.000005348613,"threshold_uncertainty_score":0.97488546},"labels":[],"label_agreement":null},{"id":"W2031181375","doi":"10.1111/jam.12020","title":"Hydrocarbon-degrading potential of microbial communities from Arctic plants","year":2012,"lang":"en","type":"article","venue":"Journal of Applied Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Biotechnology Research Institute; National Research Council Canada; Canadian Museum of Nature; McGill University","funders":"Consejo Nacional de Ciencia y Tecnología","keywords":"Library science; Sociology; Computer science","score_opus":0.00894979567334066,"score_gpt":0.19466483057690484,"score_spread":0.18571503490356417,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031181375","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980423,0.00010871858,0.000078642195,0.00004934349,0.0006679947,0.00008223214,0.00006834377,0.000006098502,0.0008963247],"genre_scores_gemma":[0.99724877,0.00007768216,0.002114567,0.00028678664,0.00020567478,3.4503253e-7,0.000038993538,0.000011336032,0.000015822565],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988996,0.000055454097,0.00055885344,0.00008580683,0.000084044455,0.0003162892],"domain_scores_gemma":[0.99907655,0.000058226044,0.000603166,0.00014397582,0.000014811923,0.00010324775],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00034801062,0.00015247245,0.00035134333,0.0000735586,0.000060272538,0.000008901864,0.00034627403,0.00015709686,0.0016896237],"category_scores_gemma":[0.0000064133465,0.00012368774,0.00011029139,0.00007891372,0.00028177837,0.0001012106,0.00014874015,0.00026280907,0.00014526973],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019038862,0.00012963156,0.015702011,0.0000047695366,0.000052815732,0.0000019136858,0.001181135,0.000029139359,0.98036593,0.000010989426,0.0016766236,0.000654648],"study_design_scores_gemma":[0.0017802921,0.00015599595,0.026578866,0.000045160054,0.00009461754,0.00033032426,0.0015178942,0.000007929349,0.9571335,0.00022070899,0.01180961,0.000325114],"about_ca_topic_score_codex":0.0001976612,"about_ca_topic_score_gemma":0.00005965402,"teacher_disagreement_score":0.023232447,"about_ca_system_score_codex":0.00010111681,"about_ca_system_score_gemma":0.000016762524,"threshold_uncertainty_score":0.999223},"labels":[],"label_agreement":null},{"id":"W2031528018","doi":"10.1016/s0043-1354(01)00496-1","title":"Bioaugmentation with the resin acid-degrading bacterium Zoogloea resiniphila DhA-35 to counteract pH stress in an aerated lagoon treating pulp and paper mill effluent","year":2002,"lang":"en","type":"article","venue":"Water Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":58,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Effluent; Bioaugmentation; Paper mill; Aeration; Aerated lagoon; Pulp and paper industry; Pulp mill; Microbial population biology; Pulp (tooth); Chemistry; Resin acid; Bacteria; Ribosomal Intergenic Spacer analysis; Biodegradation; Papermaking; Environmental chemistry; Wastewater; Biology; Environmental science; Environmental engineering; Activated sludge; Microorganism; Ribosomal RNA; Biochemistry; Organic chemistry","score_opus":0.042383965017214725,"score_gpt":0.2967930438285968,"score_spread":0.2544090788113821,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031528018","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940768,0.000022778706,0.0000020986488,0.004656672,0.000026863925,0.00051254407,0.000022420598,0.000018696814,0.0006611239],"genre_scores_gemma":[0.9985145,0.000029255596,0.0001460919,0.0003568133,0.00003332712,0.000021081454,0.00004236766,0.000017970271,0.0008386326],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99787146,0.0004116079,0.0002110652,0.0004265963,0.00055074936,0.000528503],"domain_scores_gemma":[0.9995043,0.000033864457,0.00003126667,0.0002444428,0.000030909778,0.00015516288],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00086921273,0.00015020926,0.000121313606,0.00011346863,0.00030476353,0.00028635297,0.00022701855,0.00006210398,0.0022872114],"category_scores_gemma":[0.000023680052,0.000081747465,0.000013958188,0.0004283175,0.00017331135,0.00043443282,0.00014590389,0.00023161234,0.0003410667],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013514563,0.00008141657,0.056737818,0.000008043943,0.0000040698264,0.000016219747,0.004391703,0.00002620813,0.9355032,0.0000011621509,0.00097490207,0.0021201042],"study_design_scores_gemma":[0.0008961452,0.0003986121,0.106615655,0.000075213764,0.000004843842,0.000006619571,0.0011488784,0.0008639202,0.88452274,0.0000058643636,0.0052228435,0.0002386596],"about_ca_topic_score_codex":0.0009738693,"about_ca_topic_score_gemma":0.0036424703,"teacher_disagreement_score":0.050980464,"about_ca_system_score_codex":0.00021743435,"about_ca_system_score_gemma":0.000005236767,"threshold_uncertainty_score":0.99862486},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low"}],"label_agreement":"agree"},{"id":"W2031542926","doi":"10.1007/s10532-006-9090-6","title":"The recent evolution of pentachlorophenol (PCP)-4-monooxygenase (PcpB) and associated pathways for bacterial degradation of PCP","year":2006,"lang":"en","type":"review","venue":"Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":58,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Tech University","funders":"National Institute of Environmental Health Sciences; National Institutes of Health; U.S. Environmental Protection Agency","keywords":"Pentachlorophenol; Monooxygenase; Xenobiotic; Bacteria; Biodegradation; Catabolism; Bioremediation; Chemistry; Biology; Environmental chemistry; Enzyme; Cytochrome P450; Biochemistry; Ecology; Genetics","score_opus":0.03801155533845058,"score_gpt":0.25914463140754224,"score_spread":0.22113307606909166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031542926","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.025960814,0.96132827,0.0009784168,0.00014271571,0.0015750193,0.005420326,0.004063393,0.00007737062,0.00045367546],"genre_scores_gemma":[0.0029575792,0.99238014,0.00043213886,0.000006257256,0.00007528272,0.00004926021,0.0038242948,0.000028604121,0.00024645266],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980012,0.0001964991,0.00090856256,0.00035128914,0.00031991,0.00022250667],"domain_scores_gemma":[0.99808717,0.00017714124,0.0013709153,0.00024671236,0.00006623107,0.00005185887],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006436389,0.00027272466,0.00056587654,0.00006802792,0.00017240232,0.00003791002,0.00021891578,0.00028411753,0.000102714424],"category_scores_gemma":[0.00022776907,0.0001904298,0.00017856869,0.0003418269,0.00016470971,0.00014239243,0.0000791733,0.000090888694,0.000016460051],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054225715,0.00015804441,0.000101604055,0.00066765794,0.000051115832,1.3690101e-7,0.000027281123,9.94783e-7,0.012296133,0.00017597864,0.004552989,0.98191386],"study_design_scores_gemma":[0.0006390033,0.00016788067,0.0013045794,0.00051279913,0.0002544568,0.0000018105475,0.000027265365,0.00009423382,0.002707832,0.00011219029,0.9938408,0.00033712926],"about_ca_topic_score_codex":0.00028742358,"about_ca_topic_score_gemma":0.00046154542,"teacher_disagreement_score":0.98928785,"about_ca_system_score_codex":0.00054336136,"about_ca_system_score_gemma":0.000101001206,"threshold_uncertainty_score":0.7765502},"labels":[],"label_agreement":null},{"id":"W2031689679","doi":"10.1016/s0021-9673(99)00922-x","title":"Application of solid-phase microextraction–gas chromatography–mass spectrometry to characterize intermediates in a joint solar–microbial process for total mineralization of Aroclor 1254","year":2000,"lang":"en","type":"article","venue":"Journal of Chromatography A","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; National Research Council Canada","funders":"","keywords":"Chemistry; Chromatography; Mass spectrometry; Benzoic acid; Solid-phase microextraction; Gas chromatography; Biodegradation; Gas chromatography–mass spectrometry; Mineralization (soil science); Biphenyl; Organic chemistry","score_opus":0.008891554558657257,"score_gpt":0.26693737367271925,"score_spread":0.258045819114062,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031689679","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940271,0.000033923498,0.004755173,0.00017542993,0.00013400352,0.00061498425,0.0001751819,0.000011902603,0.00007234162],"genre_scores_gemma":[0.99672973,0.00011518827,0.0028904902,0.00009086218,0.00009458578,0.000013670823,0.000034799938,0.00001981531,0.00001084047],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978274,0.00005063572,0.001247664,0.00024740482,0.00034607388,0.00028081803],"domain_scores_gemma":[0.9985147,0.000034204022,0.0010353208,0.00016594001,0.00009994674,0.00014987565],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041706307,0.0002148963,0.00051569863,0.0006326843,0.00004188135,0.000021438382,0.00025626147,0.00012625553,0.0005416558],"category_scores_gemma":[0.00003508976,0.00019418786,0.00034482323,0.0013191215,0.00014896935,0.00039867545,0.00002069674,0.0001365698,0.000010346185],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004952479,0.00075774046,0.012346698,0.00011332395,0.0000493467,0.0000024603323,0.0005688689,0.0001305041,0.98050916,0.0000022428628,0.0003604213,0.004664006],"study_design_scores_gemma":[0.002676598,0.00088173366,0.078550525,0.00019292418,0.000055397108,0.00009263265,0.00012554835,0.00040262644,0.91558754,0.00011247896,0.0010653773,0.00025658362],"about_ca_topic_score_codex":0.00006153473,"about_ca_topic_score_gemma":0.000057990783,"teacher_disagreement_score":0.06620383,"about_ca_system_score_codex":0.0000676692,"about_ca_system_score_gemma":0.000038795217,"threshold_uncertainty_score":0.7918751},"labels":[],"label_agreement":null},{"id":"W2031877981","doi":"10.1111/gwat.12130","title":"Identification of Multiple Sources of Groundwater Contamination by Dual Isotopes","year":2013,"lang":"en","type":"article","venue":"Ground Water","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"National Research Foundation of Korea","keywords":"Contamination; Groundwater; Chlorinated solvents; Environmental science; Environmental chemistry; Groundwater contamination; Contaminated groundwater; Aquifer; Environmental engineering; Chemistry; Geology; Environmental remediation; Ecology","score_opus":0.006490050004102042,"score_gpt":0.18757117152525946,"score_spread":0.1810811215211574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031877981","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99909216,0.000005834689,0.00019933452,0.00017787723,0.00008221956,0.00020462803,0.000011972468,0.000009817237,0.00021615993],"genre_scores_gemma":[0.9974497,0.000004946509,0.000044731496,0.000060236707,0.000011636553,0.00000629263,0.00005354709,0.0000053810304,0.00236354],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992306,0.00003350448,0.00029713148,0.00013739205,0.00017434524,0.0001269875],"domain_scores_gemma":[0.9997214,0.0000140657785,0.00010339528,0.000110700224,0.00002216997,0.000028290557],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00015215774,0.00007180308,0.00009379493,0.000021688444,0.000034174012,0.00002602592,0.00009247522,0.000051395415,0.0032846902],"category_scores_gemma":[0.000009543157,0.000046728874,0.00003125214,0.000045878343,0.00012635814,0.00030898626,0.000053458403,0.00002774088,0.0008384548],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004902505,0.00006735596,0.068165526,0.0000081285925,0.000004869341,8.068056e-8,0.0006771635,0.0000027265912,0.92779016,0.0000032875519,0.0020583724,0.0012174478],"study_design_scores_gemma":[0.00020652013,0.00003184518,0.15619256,0.0000020907535,0.0000050714425,8.5307107e-7,0.00010166814,0.00011683029,0.84131306,0.00006620419,0.0018963935,0.000066913686],"about_ca_topic_score_codex":0.0012123688,"about_ca_topic_score_gemma":0.00006393403,"teacher_disagreement_score":0.08802704,"about_ca_system_score_codex":0.00002814155,"about_ca_system_score_gemma":0.0000011744704,"threshold_uncertainty_score":0.9999395},"labels":[],"label_agreement":null},{"id":"W2032081228","doi":"10.1007/s11274-009-0246-5","title":"Purification and characterization of a novel biosurfactant produced by Bacillus licheniformis MS3","year":2009,"lang":"en","type":"article","venue":"World Journal of Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Polytechnique Montréal","funders":"","keywords":"Bacillus licheniformis; Chemistry; Residue (chemistry); Moiety; Chromatography; Amide; Stereochemistry; Bacillales; Fatty acid; Organic chemistry; Bacteria; Bacillus subtilis; Biology","score_opus":0.006560096617477314,"score_gpt":0.19621936487392097,"score_spread":0.18965926825644366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032081228","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917761,0.00019672232,0.00013904189,0.0076142093,0.0000790756,0.00011390505,0.000041878393,0.000011409074,0.000027650505],"genre_scores_gemma":[0.99781644,0.00079838606,0.00094806874,0.00030475017,0.000014156486,2.22863e-7,0.00001661511,0.0000034445227,0.00009790386],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999177,0.000029925863,0.00041441745,0.00018291739,0.000040869294,0.00015487315],"domain_scores_gemma":[0.99933106,0.000013810272,0.00048366972,0.000101146,0.000025390853,0.00004491584],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027195446,0.00011656982,0.00023500042,0.00013686121,0.00005062031,0.000006867821,0.00013623666,0.00023260177,0.00009867772],"category_scores_gemma":[0.00003227331,0.00008853184,0.00002954376,0.0002477206,0.00035424076,0.000095651034,0.000045044893,0.00018178635,0.0000053899803],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006840704,0.0001102466,0.002670883,0.0000039226884,0.000011750003,9.219976e-7,0.000053044616,1.7288315e-7,0.9833192,0.00006435806,0.0003081988,0.013388849],"study_design_scores_gemma":[0.00057881,0.0003196965,0.013782448,0.000014283823,0.00001607662,0.0001720651,0.000013631907,0.000007729453,0.967399,0.000021827998,0.017574102,0.00010031035],"about_ca_topic_score_codex":0.0000050470944,"about_ca_topic_score_gemma":0.000012591044,"teacher_disagreement_score":0.017265903,"about_ca_system_score_codex":0.00002797686,"about_ca_system_score_gemma":0.000011093855,"threshold_uncertainty_score":0.36102235},"labels":[],"label_agreement":null},{"id":"W2033096181","doi":"10.1016/j.watres.2005.06.022","title":"Biodegradation of petroleum hydrocarbons in an immobilized cell airlift bioreactor","year":2005,"lang":"en","type":"article","venue":"Water Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":61,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bioreactor; Airlift; Biodegradation; Aeration; Microbial consortium; Chemistry; Bioremediation; Membrane bioreactor; Naphthalene; Bioreactor landfill; Microorganism; Pulp and paper industry; Chromatography; Environmental chemistry; Contamination; Organic chemistry; Biology; Bacteria","score_opus":0.036175630769543624,"score_gpt":0.3045501016400039,"score_spread":0.2683744708704603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033096181","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995724,0.000008226933,0.0000022968081,0.0005501102,0.000023516104,0.00017803331,0.0000079555175,0.00001261696,0.00349321],"genre_scores_gemma":[0.99897194,0.000014081875,0.00023989141,0.00002996489,0.00002393941,0.0000054130114,0.000040262028,0.000008186108,0.00066629687],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998535,0.00017779953,0.00022435961,0.000250747,0.0004445136,0.000367593],"domain_scores_gemma":[0.99962556,0.000011465952,0.000024516763,0.00023204807,0.00000791849,0.00009848305],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00088537845,0.00007733224,0.00010112684,0.00013831122,0.000042836327,0.000026270689,0.0002486691,0.000070688395,0.0018227135],"category_scores_gemma":[0.000013060918,0.000052992335,0.000027431906,0.00022843725,0.00016888503,0.0002126472,0.00012346517,0.00016410222,0.0012293004],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003638954,0.00022650245,0.050674856,0.000002939551,7.288252e-7,0.0000011514863,0.00048181484,0.000013534243,0.9468476,0.0000020380471,0.0002859252,0.0014264834],"study_design_scores_gemma":[0.00047476665,0.0001095868,0.022147665,0.000003865957,9.3368993e-7,4.0619534e-7,0.00007485696,0.0007855319,0.96607816,0.000027376074,0.010214873,0.00008195333],"about_ca_topic_score_codex":0.0008002569,"about_ca_topic_score_gemma":0.0012537988,"teacher_disagreement_score":0.028527193,"about_ca_system_score_codex":0.00013793244,"about_ca_system_score_gemma":0.000012270748,"threshold_uncertainty_score":0.9995484},"labels":[],"label_agreement":null},{"id":"W2033128381","doi":"10.2495/cmem090051","title":"Non-thermal, chemical destruction of PCB from Sydney tar ponds soil extract","year":2009,"lang":"en","type":"article","venue":"WIT transactions on modelling and simulation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cape Breton University","funders":"Edgewood Chemical Biological Center; Atlantic Canada Opportunities Agency; Cape Breton University","keywords":"Environmental remediation; Contamination; Coal tar; Incineration; Waste management; Environmental chemistry; Environmental science; Soil contamination; tar (computing); Chemistry; Coal; Soil water","score_opus":0.01454877978795974,"score_gpt":0.22134551745626968,"score_spread":0.20679673766830994,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033128381","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7004087,0.000005415731,0.2992465,0.00005183409,0.00004159485,0.00006431957,0.000012452553,0.000020344634,0.0001488812],"genre_scores_gemma":[0.99709046,0.000028750079,0.0027215597,0.000066680186,0.000023502113,6.670286e-7,0.000021205484,0.000006392355,0.00004076134],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9992875,0.000015171425,0.00020976354,0.00021256675,0.00016719436,0.0001078068],"domain_scores_gemma":[0.999718,0.000030232377,0.00006797894,0.000108122076,0.000011841328,0.00006380898],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000072656985,0.00010502134,0.00010719327,0.000037012804,0.0000888798,0.000016185255,0.000047001995,0.000110022986,0.00039440257],"category_scores_gemma":[0.000002026336,0.00009913625,0.000045495115,0.000111726054,0.00004421459,0.00017171403,0.0000011641021,0.00010971161,0.00002794449],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005268523,0.00005440261,0.00012063498,0.0000012297581,0.000003185666,1.576691e-7,0.00016939636,0.65620923,0.33316126,8.687611e-7,0.0000027100557,0.010224208],"study_design_scores_gemma":[0.00031865135,0.00005469982,0.0013550948,0.000014932866,0.0000201044,5.648896e-7,0.000015315056,0.8776367,0.12021824,0.00022244868,0.000037138067,0.00010610997],"about_ca_topic_score_codex":0.00012911732,"about_ca_topic_score_gemma":0.000008379393,"teacher_disagreement_score":0.2966818,"about_ca_system_score_codex":0.00004744019,"about_ca_system_score_gemma":0.000005512237,"threshold_uncertainty_score":0.43184316},"labels":[],"label_agreement":null},{"id":"W2033771646","doi":"10.1016/j.jenvman.2003.09.003","title":"Transport of gellan gum microbeads through sand: an experimental evaluation for encapsulated cell bioaugmentation","year":2003,"lang":"en","type":"article","venue":"Journal of Environmental Management","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University; McGill University; Biotechnology Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Bioaugmentation; Gellan gum; Chromatography; Groundwater; Inlet; Aquifer; Water column; Chemistry; Packed bed; Materials science; Contamination; Geotechnical engineering; Bioremediation; Geology; Ecology","score_opus":0.01483769602160661,"score_gpt":0.24952697022931938,"score_spread":0.23468927420771277,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033771646","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938853,0.00016124097,0.0008579344,0.000024099008,0.00026833126,0.0007363461,0.00003657147,0.0000049718024,0.004025239],"genre_scores_gemma":[0.99006855,0.000120555495,0.00934338,0.00013391761,0.00002237383,0.0000071719764,0.000051291827,0.00001716848,0.00023556843],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99820983,0.00010205785,0.0006576595,0.00023275074,0.0005914097,0.00020629838],"domain_scores_gemma":[0.9991827,0.000011373065,0.00054014457,0.00016789671,0.000008235568,0.00008962223],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000670956,0.00017920794,0.00020546535,0.000060260812,0.00007145118,0.00001239531,0.00018729635,0.00006525061,0.0046891],"category_scores_gemma":[0.0000032592382,0.00016145287,0.0001409319,0.00009629278,0.00010896902,0.00036422472,0.00002710463,0.00006392327,0.00003563759],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011695001,0.0007920458,0.0042209136,0.000017576056,0.000037882477,0.0000036857728,0.00080490654,0.0011032274,0.99113446,0.000021156175,0.0005355356,0.0012116852],"study_design_scores_gemma":[0.0034041763,0.000757094,0.019494696,0.000017241904,0.00017628033,0.000011724554,0.0023855479,0.00017441709,0.9673542,0.00015063827,0.005841197,0.00023283121],"about_ca_topic_score_codex":0.0000080556365,"about_ca_topic_score_gemma":0.000002971821,"teacher_disagreement_score":0.023780279,"about_ca_system_score_codex":0.00047107617,"about_ca_system_score_gemma":0.000009544931,"threshold_uncertainty_score":0.99622077},"labels":[],"label_agreement":null},{"id":"W2033828678","doi":"10.1007/s13213-012-0425-8","title":"Culturable bacterial pool from aged petroleum-contaminated soil: identification of oil-eating Bacillus strains","year":2012,"lang":"en","type":"article","venue":"Annals of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakehead University","funders":"Fundação Araucária","keywords":"Bioremediation; Biology; 16S ribosomal RNA; Bacillus (shape); Soil contamination; Food science; Bacteria; Population; Biodegradation; Microbiology; Soil microbiology; Bacillales; Contamination; Botany; Ecology; Bacillus subtilis; Genetics","score_opus":0.0240265625325193,"score_gpt":0.25022384016431315,"score_spread":0.22619727763179384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033828678","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982255,0.00006555688,0.000011351798,0.00014216197,0.0003273721,0.00006899418,0.000576724,0.000016187787,0.00056614226],"genre_scores_gemma":[0.9985575,0.00007885388,0.0001299283,0.00015251324,0.000061602776,0.0000016860168,0.0005091245,0.000007918807,0.00050088705],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987322,0.00015436254,0.0005205178,0.00021086272,0.00006557269,0.00031646635],"domain_scores_gemma":[0.9992256,0.000043260603,0.00044690003,0.00018589688,0.000030908817,0.000067416724],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00042104197,0.0001342243,0.00024911674,0.000034775345,0.000052828687,0.0000082265315,0.00021424828,0.0001577745,0.00428283],"category_scores_gemma":[0.000085516425,0.00011515695,0.00008268036,0.00011118744,0.00021351226,0.00018263792,0.000088477034,0.000083609055,0.00028174793],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038779915,0.0001059923,0.014532001,0.000007870881,0.000027301985,2.7872142e-7,0.00053604046,0.000010120707,0.9804231,0.0000050644153,0.0022659998,0.0020474752],"study_design_scores_gemma":[0.00032780616,0.000045099707,0.10998602,0.000012781982,0.000011851524,0.0000029644816,0.00013331203,0.0000085715665,0.8873797,0.000006890921,0.001967747,0.0001172264],"about_ca_topic_score_codex":0.0005071364,"about_ca_topic_score_gemma":0.00021197431,"teacher_disagreement_score":0.095454015,"about_ca_system_score_codex":0.000025628322,"about_ca_system_score_gemma":0.00001021762,"threshold_uncertainty_score":0.9966274},"labels":[],"label_agreement":null},{"id":"W2034496807","doi":"10.1111/j.1745-6584.2011.00897.x","title":"Fingerprinting TCE in a Bedrock Aquifer Using Compound‐Specific Isotope Analysis","year":2012,"lang":"en","type":"article","venue":"Ground Water","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph; University of Waterloo","funders":"","keywords":"Isotope analysis; Environmental chemistry; Aquifer; Groundwater; Trichloroethylene; Chemistry; Bedrock; Isotope; Environmental science; Geology; Geomorphology","score_opus":0.024176245977235486,"score_gpt":0.23440949471583614,"score_spread":0.21023324873860066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034496807","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975159,0.000018797658,0.00042351772,0.000084261905,0.00015646506,0.00012444056,0.0000023044797,0.000018111601,0.0016561807],"genre_scores_gemma":[0.9984111,0.0000052233236,0.0008427879,0.0002562681,0.00007355848,0.000002026738,0.00001551453,0.000008507653,0.0003850048],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99885947,0.000051853865,0.00023113648,0.00021285345,0.00017732935,0.00046737317],"domain_scores_gemma":[0.99968606,0.000012493594,0.000040895753,0.00016789864,0.0000041214707,0.000088551875],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00034783728,0.000117933254,0.00015434026,0.000086271095,0.00008987923,0.000059709164,0.0001326081,0.000063376654,0.0052419337],"category_scores_gemma":[0.000004105107,0.00008511903,0.00007312845,0.00036566728,0.000053430693,0.00032178237,0.00016655186,0.00009253418,0.0014497055],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000068765744,0.00006329543,0.70776135,0.0000019037217,0.000017632006,0.0000023894913,0.0011086883,0.00025071998,0.29006615,0.0000049143796,0.0001614028,0.00055465987],"study_design_scores_gemma":[0.00040069985,0.00000959941,0.898578,0.000007790939,0.000065468754,0.000009558677,0.00017292274,0.001551097,0.050423034,0.0000372924,0.048323568,0.00042098275],"about_ca_topic_score_codex":0.0005260406,"about_ca_topic_score_gemma":0.00018816831,"teacher_disagreement_score":0.23964311,"about_ca_system_score_codex":0.00019142445,"about_ca_system_score_gemma":0.0000017825696,"threshold_uncertainty_score":0.9993278},"labels":[],"label_agreement":null},{"id":"W2034750820","doi":"10.1038/ismej.2015.22","title":"Comparative analysis of metagenomes from three methanogenic hydrocarbon-degrading enrichment cultures with 41 environmental samples","year":2015,"lang":"en","type":"article","venue":"The ISME Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":110,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Virtual Materials Group (Canada); Ontario Genomics; University of Calgary; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Innovates; Universitetet i Oslo; University of Alberta; Genome Canada","keywords":"Hydrocarbon; Metagenomics; Bioremediation; Methanogenesis; Enrichment culture; Biology; Environmental chemistry; Methane; Bacteria; Microbiology; Chemistry; Ecology; Gene; Biochemistry; Organic chemistry; Genetics","score_opus":0.039150073206679015,"score_gpt":0.25670632687831024,"score_spread":0.21755625367163123,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034750820","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977299,0.00045214666,0.00058166345,0.00021157644,0.0000614349,0.00010480025,0.000060121405,0.0000067693672,0.0007915613],"genre_scores_gemma":[0.99782616,0.00007616602,0.001815389,0.00011896127,0.00004576839,0.0000011567686,0.00002041877,0.000005038974,0.00009091944],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99866116,0.00012072661,0.00028962182,0.0001724811,0.0005673654,0.00018863162],"domain_scores_gemma":[0.9992716,0.000059038808,0.00032783483,0.0001820913,0.000006670366,0.00015279045],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004517401,0.00015607695,0.00033523398,0.00006264454,0.00012822953,0.00004159189,0.00034139236,0.000036898597,0.0018974715],"category_scores_gemma":[0.000007036241,0.00008055062,0.00014318751,0.0003378935,0.00022477965,0.00012874696,0.00009787325,0.00015996513,0.00006037236],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011739818,0.00016741517,0.3972394,6.2523355e-7,0.002725647,0.0000053966187,0.009728289,0.0061967466,0.5818177,0.000013738932,0.0014102348,0.000577403],"study_design_scores_gemma":[0.0010926126,0.000289042,0.85266024,0.000009543668,0.002798731,0.000025458541,0.0046497732,0.0020588709,0.13237193,0.0007462943,0.0029223869,0.00037508045],"about_ca_topic_score_codex":0.0002658288,"about_ca_topic_score_gemma":0.0008578218,"teacher_disagreement_score":0.45542088,"about_ca_system_score_codex":0.00018562602,"about_ca_system_score_gemma":0.00001619177,"threshold_uncertainty_score":0.9990149},"labels":[],"label_agreement":null},{"id":"W2034794027","doi":"10.1080/09593330.2013.811529","title":"The use of used automobile tyres in a partitioning bioreactor for the biodegradation of xenobiotic mixtures","year":2013,"lang":"en","type":"article","venue":"Environmental Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Biodegradation; Bioreactor; Xenobiotic; Chemistry; Waste management; Environmental science; Pulp and paper industry; Biochemical engineering; Environmental engineering; Engineering; Organic chemistry","score_opus":0.01774018899778033,"score_gpt":0.2068718194519797,"score_spread":0.18913163045419937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034794027","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979068,0.00008814754,0.00010264776,0.001160396,0.000054647677,0.000620109,0.000039678012,0.000016388592,0.000011182596],"genre_scores_gemma":[0.99893755,0.000108378976,0.0007653933,0.000039450104,0.000005491768,0.00004835139,0.000012978328,0.000006509613,0.00007588676],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992937,0.000025554127,0.00025900308,0.0001456104,0.00011040342,0.00016576522],"domain_scores_gemma":[0.99940467,0.00019183246,0.00016088154,0.00022505586,0.0000019838021,0.000015587319],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010897656,0.000084423875,0.00009997234,0.00004173336,0.00008460542,0.000011898279,0.00021449628,0.00009876255,0.0005171082],"category_scores_gemma":[0.000051768322,0.000049289996,0.00003977363,0.0001592568,0.0007080095,0.00010738475,0.00010203015,0.000073128256,0.000059900794],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008250473,0.0000726914,0.09226959,0.0000022460263,0.0000075087896,9.7909705e-8,0.00007908295,0.000062027495,0.89565283,0.000061286904,0.0007540715,0.011030316],"study_design_scores_gemma":[0.00037116083,0.00012120752,0.1798887,0.000009481512,0.0000110891315,0.000001694445,0.00039326173,0.0012601053,0.80562776,0.00031613157,0.011898713,0.00010071125],"about_ca_topic_score_codex":0.0002088758,"about_ca_topic_score_gemma":0.00016841434,"teacher_disagreement_score":0.09002508,"about_ca_system_score_codex":0.000066025714,"about_ca_system_score_gemma":0.0000033538456,"threshold_uncertainty_score":0.5661972},"labels":[],"label_agreement":null},{"id":"W2035132776","doi":"10.1021/es9910659","title":"Cyclodextrins for Desorption and Solubilization of 2,4,6-Trinitrotoluene and Its Metabolites from Soil","year":2000,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Trinitrotoluene; Chemistry; Desorption; Topsoil; Illite; Soil water; Environmental chemistry; Sorption; Contamination; Solubility; Aqueous solution; Nuclear chemistry; Chromatography; Clay minerals; Organic chemistry; Mineralogy; Adsorption; Geology","score_opus":0.00550514071418459,"score_gpt":0.20046681616866424,"score_spread":0.19496167545447965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035132776","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988735,0.00023810875,0.00008844376,0.00018352896,0.000027425778,0.00034467725,0.00005690239,0.000031030897,0.00015643724],"genre_scores_gemma":[0.9978336,0.00064680725,0.0013076626,0.000056881738,0.000008250213,0.000013699881,0.000010716429,0.0000058950995,0.0001164721],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989767,0.000012412671,0.00019238242,0.00040325132,0.00018402022,0.00023122373],"domain_scores_gemma":[0.99969053,0.00002130969,0.00007867921,0.00013469152,0.0000026796647,0.00007210444],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018971435,0.00010897377,0.00013296216,0.000101158235,0.00016420707,0.000015576135,0.00018784787,0.00009971527,0.0013471683],"category_scores_gemma":[0.00003334636,0.0000996362,0.000017994527,0.00034158348,0.0012145418,0.0002794531,0.00015241356,0.00005250294,0.000057109508],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014382181,0.000045128305,0.045660466,0.0000015399277,0.0000019842385,1.7809505e-7,0.00009679127,0.000031781143,0.9174607,0.00005630275,0.0000063618845,0.036624376],"study_design_scores_gemma":[0.0004447913,0.00009575473,0.12839828,0.0000043636824,0.00001369888,0.0000051379175,0.00010088676,0.0016133743,0.86570644,0.0009721192,0.0025069711,0.0001381429],"about_ca_topic_score_codex":0.00003916026,"about_ca_topic_score_gemma":0.000024299328,"teacher_disagreement_score":0.082737826,"about_ca_system_score_codex":0.00007169065,"about_ca_system_score_gemma":0.000006202776,"threshold_uncertainty_score":0.9995657},"labels":[],"label_agreement":null},{"id":"W2035170434","doi":"10.1016/s0304-3894(01)00318-1","title":"Feasibility of fungi bioaugmentation in composting a flare pit soil","year":2002,"lang":"en","type":"article","venue":"Journal of Hazardous Materials","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":52,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Bioaugmentation; Total petroleum hydrocarbon; Biodegradation; Hydrocarbon; Water content; Environmental science; Soil contamination; Pulp and paper industry; Moisture; Environmental chemistry; Chemistry; Bioremediation; Soil water; Contamination; Biology; Soil science; Ecology","score_opus":0.030087197967827797,"score_gpt":0.24560874991567108,"score_spread":0.21552155194784328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035170434","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99894905,0.00006396606,0.000009227432,0.00017217979,0.00031266295,0.00010914231,0.000025950321,0.0000040869963,0.00035375572],"genre_scores_gemma":[0.9991533,0.00008359288,0.0005966927,0.00007270839,0.000043731077,2.623561e-7,0.000002197591,0.0000050241615,0.000042475494],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987495,0.00011064937,0.0006682077,0.000093663475,0.00024892285,0.00012906968],"domain_scores_gemma":[0.9992557,0.000026860971,0.0005605062,0.000083528495,0.000023996954,0.0000493679],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00065513834,0.00008053635,0.00023546522,0.000053529817,0.00002381146,0.000024642935,0.00013173706,0.00004922986,0.006498486],"category_scores_gemma":[0.000065088054,0.000064137545,0.000047101945,0.000120624514,0.000056353892,0.00016889814,0.000043904012,0.000051722553,0.00010235687],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005296231,0.00011134939,0.044265762,0.000015829144,0.000004346859,0.0000103989805,0.0003303691,0.000043531392,0.95248103,9.875528e-7,0.0007927631,0.0018906834],"study_design_scores_gemma":[0.00096066616,0.0001383008,0.1500832,0.00006274116,0.000011810417,0.00004257127,0.00011653287,0.00004705362,0.8482074,0.00004814067,0.00018126033,0.0001003446],"about_ca_topic_score_codex":0.000069359165,"about_ca_topic_score_gemma":0.00006458012,"teacher_disagreement_score":0.10581743,"about_ca_system_score_codex":0.00012727125,"about_ca_system_score_gemma":0.0000071478016,"threshold_uncertainty_score":0.9944097},"labels":[],"label_agreement":null},{"id":"W203543714","doi":"10.1007/978-3-540-72641-8_4","title":"Biodegradability of Oxygenates by Microflora from MTBE-Contaminated Sites: New Molecular Tools","year":2007,"lang":"en","type":"book-chapter","venue":"˜The œhandbook of environmental chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Biodegradation; Gasoline; Environmental chemistry; Methyl tert-butyl ether; Chemistry; Ether; Octane rating; Oxygenate; Contamination; Waste management; Organic chemistry; Ecology; Biology","score_opus":0.011938093403277845,"score_gpt":0.19137053026984258,"score_spread":0.17943243686656474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W203543714","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86580276,0.011042735,0.00022378705,0.00009593278,0.00015862501,0.0011535895,0.010022896,0.00006479817,0.111434855],"genre_scores_gemma":[0.81854564,0.0014683803,0.00092211855,0.00046831873,0.000112910246,0.000005021868,0.0038830005,0.00014315094,0.17445146],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975285,0.000020004032,0.0008049006,0.0006900164,0.0006255556,0.00033102892],"domain_scores_gemma":[0.998249,0.00010068868,0.0006855809,0.00075049925,0.000005790995,0.00020845751],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018511617,0.00055102597,0.00055735407,0.000019430026,0.00005982216,0.000018563294,0.0006884736,0.0005957652,0.025384001],"category_scores_gemma":[0.000010187204,0.0004600072,0.00031620794,0.000039503717,0.0010499137,0.000078162164,0.00032157035,0.00037905714,0.00040561685],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000072829615,0.00010890537,0.00087828183,0.00003169459,0.00009260568,0.0000069541165,0.00008324344,0.0000014248791,0.9885629,9.3459147e-7,0.005335694,0.004824551],"study_design_scores_gemma":[0.00056129,0.00004335738,0.00057284714,0.000111620575,0.000109403445,0.0000036240913,0.00003748788,0.0000043676278,0.95709026,0.00017018773,0.04084285,0.00045272126],"about_ca_topic_score_codex":0.00020556801,"about_ca_topic_score_gemma":0.000031749925,"teacher_disagreement_score":0.0630166,"about_ca_system_score_codex":0.00035349734,"about_ca_system_score_gemma":0.000026038293,"threshold_uncertainty_score":0.9997852},"labels":[],"label_agreement":null},{"id":"W2035539104","doi":"10.1038/sj.jim.7000046","title":"Development of a method for the application of solid-phase microextraction to monitor biodegradation of volatile hydrocarbons during bacterial growth on crude oil","year":2000,"lang":"en","type":"article","venue":"Journal of Industrial Microbiology & Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada; University of Waterloo","keywords":"Biodegradation; Chromatography; Solid-phase microextraction; Flame ionization detector; Laboratory flask; Chemistry; Gas chromatography; Microbial biodegradation; Mass spectrometry; Gas chromatography–mass spectrometry; Microorganism; Bacteria; Organic chemistry; Biology","score_opus":0.017962973857997673,"score_gpt":0.28973184183347156,"score_spread":0.2717688679754739,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035539104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940287,0.000013812305,0.00416477,0.0010200598,0.00031192973,0.0003091041,0.0001345992,0.0000082335955,0.000008813419],"genre_scores_gemma":[0.9837985,0.0000450137,0.015955202,0.00003384118,0.0001097601,0.0000070131837,0.000019840703,0.000009533577,0.000021289308],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99839145,0.00008761844,0.0010431848,0.00019810113,0.000086668406,0.00019296691],"domain_scores_gemma":[0.99849707,0.0001324063,0.0011010813,0.00017635063,0.000050550898,0.000042544292],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005971745,0.00014943084,0.00039107347,0.00020610915,0.000078650155,0.0000034710804,0.00035929633,0.0005591125,0.00016557085],"category_scores_gemma":[0.00015021488,0.00010865791,0.00011337156,0.0003429299,0.00020497682,0.000058029455,0.000052280335,0.00026178765,0.000010167377],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014903621,0.00023133811,0.00012206002,0.0000057387783,0.000057504814,2.3743297e-7,0.00011193615,0.00002952389,0.8756534,0.0000063506304,0.0002261789,0.1220654],"study_design_scores_gemma":[0.001980365,0.0005883512,0.00040610446,0.00003451428,0.000046432466,0.000031026193,0.000059063776,0.000031888103,0.9889253,0.000011947906,0.007793308,0.000091712296],"about_ca_topic_score_codex":0.00005825869,"about_ca_topic_score_gemma":0.00005118326,"teacher_disagreement_score":0.12197369,"about_ca_system_score_codex":0.00014581,"about_ca_system_score_gemma":0.00006487028,"threshold_uncertainty_score":0.44309407},"labels":[],"label_agreement":null},{"id":"W2036189834","doi":"10.1016/j.biotechadv.2006.10.004","title":"Surfactants in microbiology and biotechnology: Part 2. Application aspects","year":2006,"lang":"en","type":"review","venue":"Biotechnology Advances","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":751,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Thompson Rivers University; University of Waterloo","funders":"","keywords":"Bioremediation; Petrochemical; Biodegradation; Chemistry; Cosmetics; Solubility; Pulmonary surfactant; Bioavailability; Wetting; Petroleum; Environmental chemistry; Enhanced oil recovery; Organic chemistry; Biochemical engineering; Biotechnology; Nanotechnology; Chemical engineering; Materials science; Bacteria; Biochemistry; Biology","score_opus":0.011985959669782721,"score_gpt":0.2603266362811201,"score_spread":0.2483406766113374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036189834","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00095809065,0.99632764,0.000044013188,0.0004524973,0.0002493931,0.00090475637,0.00015260621,0.0002771587,0.0006338163],"genre_scores_gemma":[0.0007550227,0.99809474,0.0006768231,0.000056290588,0.000031173287,0.000050658717,0.00017904604,0.00003191492,0.00012430562],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99747485,0.0001016024,0.0007043486,0.0010789098,0.000082432925,0.0005578666],"domain_scores_gemma":[0.9988285,0.0000930045,0.0005026775,0.00052062096,0.0000050019185,0.000050232975],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.000241725,0.000507846,0.0011408677,0.000326746,0.00009031369,0.000014761358,0.00057639537,0.0023367212,0.00015445],"category_scores_gemma":[0.00008091814,0.00042313652,0.000099900324,0.0009448252,0.0011579668,0.00012334426,0.00043066172,0.0006782141,0.00069987384],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000036371173,0.00006877485,0.00025964197,0.00038048872,0.000012284692,0.000015938971,0.0000031346426,7.8368834e-7,0.006338004,0.0003165012,0.0005933824,0.99200743],"study_design_scores_gemma":[0.00016984016,0.000047231253,0.00003297087,0.0003365932,0.000041447984,0.00009602204,0.000005671505,0.000002381883,0.0026037022,0.00026707482,0.9959592,0.00043781908],"about_ca_topic_score_codex":0.00006800374,"about_ca_topic_score_gemma":0.0015230132,"teacher_disagreement_score":0.99536586,"about_ca_system_score_codex":0.00025183102,"about_ca_system_score_gemma":0.000033262375,"threshold_uncertainty_score":0.999822},"labels":[],"label_agreement":null},{"id":"W2036225189","doi":"10.1016/j.jmb.2004.06.034","title":"Complete Sequence and Genetic Organization of pDTG1, the 83 Kilobase Naphthalene Degradation Plasmid from Pseudomonas putida strain NCIB 9816-4","year":2004,"lang":"en","type":"article","venue":"Journal of Molecular Biology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":146,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Plasmid; Biology; Operon; Pseudomonas putida; Transposable element; Gene; Insertion sequence; Pseudomonas; Genetics; Molecular biology; Mutant; Bacteria","score_opus":0.012352727421766173,"score_gpt":0.22956421088896295,"score_spread":0.21721148346719676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036225189","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9902352,0.00013040476,0.008336264,0.0009982581,0.0000927426,0.00008403808,0.00009847537,0.0000030698548,0.000021548616],"genre_scores_gemma":[0.99284524,0.00017199486,0.006496102,0.00042071377,0.000022751621,1.782574e-7,0.000033509306,0.0000059482218,0.0000035432927],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99917716,0.000111710535,0.00032878225,0.00012790426,0.00014274823,0.00011167518],"domain_scores_gemma":[0.999403,0.000031833817,0.000356214,0.000105769475,0.00004317831,0.000060013317],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016507052,0.00009059178,0.00013839721,0.000029862167,0.000047205256,0.000011008066,0.0001836573,0.000077667435,0.00031390402],"category_scores_gemma":[0.000105800485,0.00006148557,0.00003519424,0.00016511985,0.00022024888,0.000050610623,0.000058917092,0.000093999195,0.0000152314915],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012175665,0.000027048667,0.019003062,0.0000016836815,0.000016004518,0.00002003311,0.00007265345,0.00035072066,0.9789941,0.00005093109,0.000022434137,0.0014292017],"study_design_scores_gemma":[0.0013101159,0.0003393842,0.17726982,0.000027580987,0.00005016805,0.00036767192,0.00006784947,0.000064667525,0.81771344,0.0019436482,0.0006759974,0.00016967651],"about_ca_topic_score_codex":0.00013042887,"about_ca_topic_score_gemma":0.000046589823,"teacher_disagreement_score":0.16128063,"about_ca_system_score_codex":0.00006983148,"about_ca_system_score_gemma":0.000035813227,"threshold_uncertainty_score":0.3437029},"labels":[],"label_agreement":null},{"id":"W2036539139","doi":"10.1016/j.jhazmat.2009.10.002","title":"Enhanced phenol degradation by Pseudomonas sp. SA01: Gaining insight into the novel single and hybrid immobilizations","year":2009,"lang":"en","type":"article","venue":"Journal of Hazardous Materials","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":97,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute for Genetic Engineering and Biotechnology","keywords":"Phenol; Polyvinyl alcohol; Chitosan; Chemistry; Degradation (telecommunications); Biodegradation; Nuclear chemistry; Chromatography; Chemical engineering; Glycerol; Pseudomonas; Organic chemistry; Bacteria","score_opus":0.01017742555140682,"score_gpt":0.21745964830108244,"score_spread":0.20728222274967562,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036539139","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960987,0.00008373769,0.0016887916,0.0010525403,0.00029482308,0.0001345364,0.000015189393,0.000010309144,0.00062135555],"genre_scores_gemma":[0.9978649,0.00013251574,0.0011423705,0.00063927885,0.00009012264,6.573235e-7,0.000010043827,0.0000075952457,0.000112514645],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989596,0.000063568106,0.0004613787,0.000127451,0.00024243635,0.00014558787],"domain_scores_gemma":[0.9993341,0.000034381108,0.0004248239,0.00010475471,0.000031888903,0.00007008326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042264868,0.00011634454,0.00018335864,0.000031771684,0.00014797226,0.00013441285,0.00016133444,0.00004088371,0.0006163597],"category_scores_gemma":[0.000096592994,0.000075521464,0.00003299033,0.000099506244,0.00008330162,0.00027983286,0.000039490224,0.00006174774,0.000032587264],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003543256,0.000088621426,0.000055123113,0.0000019436432,0.0000069406665,0.0000018255465,0.0007036257,0.00001937165,0.9929389,0.000018295432,0.0019413399,0.0041885916],"study_design_scores_gemma":[0.00043630987,0.00017520567,0.0021370277,0.000020737434,0.000019083398,0.00005513679,0.00010348128,0.000010726912,0.9915877,0.00012376255,0.0052261986,0.00010462125],"about_ca_topic_score_codex":0.000021082635,"about_ca_topic_score_gemma":0.000014537759,"teacher_disagreement_score":0.0040839706,"about_ca_system_score_codex":0.0000897607,"about_ca_system_score_gemma":0.00001589994,"threshold_uncertainty_score":0.6748706},"labels":[],"label_agreement":null},{"id":"W2037105254","doi":"10.1007/s10532-010-9421-5","title":"Adhesion to the hydrocarbon phase increases phenanthrene degradation by Pseudomonas fluorescens LP6a","year":2010,"lang":"en","type":"article","venue":"Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Phenanthrene; Biodegradation; Chemistry; Pseudomonas fluorescens; Dodecanol; Aqueous two-phase system; Organic chemistry; Microbial biodegradation; Aqueous solution; Chromatography; Nuclear chemistry; Bacteria; Microorganism; Biology","score_opus":0.00888273281175762,"score_gpt":0.2382647307987965,"score_spread":0.2293819979870389,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037105254","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99515,0.000018942386,0.00053621083,0.0027250857,0.0003832049,0.00044511314,0.00010527571,0.00007904454,0.0005570919],"genre_scores_gemma":[0.99694324,0.000034278884,0.0011785503,0.00073370925,0.00011436257,0.000014659215,0.00049320713,0.0000144581145,0.00047355887],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986492,0.0000685423,0.00026525467,0.0003658906,0.00039633882,0.00025476448],"domain_scores_gemma":[0.9993077,0.000042413645,0.00012566056,0.00034209082,0.000017657161,0.00016447056],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003493045,0.00017819245,0.00010943538,0.000041574534,0.00025376468,0.00007623818,0.0002884296,0.00010889431,0.001302185],"category_scores_gemma":[0.00015047652,0.00012034435,0.00004874253,0.00037216453,0.00009830786,0.00023816091,0.00009174062,0.00014725595,0.0013406927],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041421583,0.0001870422,0.0035854944,0.0000013154042,0.0000029124458,4.6167048e-7,0.00005879519,0.0000023358377,0.9052958,0.000024821933,0.05539321,0.035406396],"study_design_scores_gemma":[0.0007879913,0.00013229187,0.011300025,0.000007990427,0.000021311418,0.000005491535,0.000038374874,0.0012335349,0.86412925,0.000037871134,0.1220269,0.00027895163],"about_ca_topic_score_codex":0.001168069,"about_ca_topic_score_gemma":0.0018393311,"teacher_disagreement_score":0.06663369,"about_ca_system_score_codex":0.0000730311,"about_ca_system_score_gemma":0.000015984211,"threshold_uncertainty_score":0.9996108},"labels":[],"label_agreement":null},{"id":"W2037238318","doi":"10.1007/s10533-006-9014-x","title":"Evaluation of CuO oxidation parameters for determining the source and stage of lignin degradation in soil","year":2006,"lang":"en","type":"article","venue":"Biogeochemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":322,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Scarborough Hospital; University of Toronto","funders":"Mississippi State University","keywords":"Lignin; Soil water; Chemistry; Phenols; Environmental chemistry; Degradation (telecommunications); Organic chemistry; Environmental science; Soil science","score_opus":0.02075062820534593,"score_gpt":0.24184622631454236,"score_spread":0.22109559810919643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037238318","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999401,0.000013547646,0.000045567896,0.000034280303,0.000012304217,0.00016913733,0.0000285479,0.0000030013134,0.00029263424],"genre_scores_gemma":[0.9994205,0.0000034988966,0.00040903414,0.000009494434,0.0000059262416,0.0000056482395,0.000065331216,0.0000025585061,0.00007801246],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99941975,0.000029625322,0.00017617158,0.00010583233,0.00020286135,0.000065756656],"domain_scores_gemma":[0.9996872,0.00004681758,0.00015357035,0.00007625299,0.000025935018,0.000010232263],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00066268834,0.00004872079,0.00005729338,0.000012011602,0.00002018018,0.0000057941547,0.00005321031,0.000049452356,0.000035812183],"category_scores_gemma":[0.0001180648,0.00003899597,0.000018101307,0.00007911676,0.00007374608,0.000044262906,0.000019971123,0.000021020593,8.743664e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005465671,0.00002345369,0.14039473,0.000011694665,0.000001311152,9.693872e-9,0.000038247144,0.00014768755,0.85433173,8.9893484e-7,0.00015209448,0.0048926896],"study_design_scores_gemma":[0.0003772867,0.000010725424,0.08987999,0.000008308528,0.000012853031,1.3449912e-7,0.00007307781,0.0030633456,0.9063977,0.00004110919,0.00009361244,0.000041883264],"about_ca_topic_score_codex":0.00027837508,"about_ca_topic_score_gemma":0.00020342629,"teacher_disagreement_score":0.05206596,"about_ca_system_score_codex":0.000042815456,"about_ca_system_score_gemma":0.000012581114,"threshold_uncertainty_score":0.15902096},"labels":[],"label_agreement":null},{"id":"W2037484441","doi":"10.1021/bi0611098","title":"Kinetic and Structural Insight into the Mechanism of BphD, a C−C Bond Hydrolase from the Biphenyl Degradation Pathway","year":2006,"lang":"en","type":"article","venue":"Biochemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Center for Research Resources; National Institute of General Medical Sciences; National Cancer Institute","keywords":"Biphenyl; Chemistry; Hydrolase; Degradation (telecommunications); Mechanism (biology); Stereochemistry; Enzyme; Biochemistry; Organic chemistry; Computer science","score_opus":0.003865338186625196,"score_gpt":0.17108994340131717,"score_spread":0.16722460521469198,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037484441","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984555,0.00016565282,0.000017117116,0.00040920996,0.00004550607,0.000084318235,0.000038526712,0.000009165794,0.000774967],"genre_scores_gemma":[0.99929994,0.000013298143,0.00025244267,0.00015112803,0.000053864584,0.0000016339317,0.00005246754,0.0000043606233,0.00017085862],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994283,0.000017655515,0.0001429615,0.0001650938,0.00015570676,0.00009028686],"domain_scores_gemma":[0.99965864,0.000035717207,0.00008811426,0.00018629122,0.000005617447,0.000025587125],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000674929,0.00008972606,0.00006185484,0.000003713655,0.00008774461,0.000022882683,0.00015838303,0.0000613514,0.00027806335],"category_scores_gemma":[0.000020434765,0.000048791084,0.000024610785,0.00008572112,0.00016913193,0.000033755987,0.00009053091,0.00006001512,0.000014699134],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000635493,0.0000075804874,0.003720436,0.0000026676466,0.0000026028042,4.5283227e-7,0.0002172136,0.000001525763,0.9945349,0.00003410708,0.0005364312,0.00093570934],"study_design_scores_gemma":[0.0001653032,0.000007792644,0.019008862,0.000005668368,0.000007981169,0.0000018835672,0.0000684743,0.00022393186,0.9787628,0.0007216293,0.000952789,0.00007290141],"about_ca_topic_score_codex":0.0015268696,"about_ca_topic_score_gemma":0.00024205516,"teacher_disagreement_score":0.015772136,"about_ca_system_score_codex":0.000028404933,"about_ca_system_score_gemma":0.0000087183835,"threshold_uncertainty_score":0.30445987},"labels":[],"label_agreement":null},{"id":"W2037571984","doi":"10.1111/j.1574-6941.2012.01328.x","title":"Methanogenic biodegradation of two-ringed polycyclic aromatic hydrocarbons","year":2012,"lang":"en","type":"article","venue":"FEMS Microbiology Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":103,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Canada","keywords":"Biodegradation; Methanogenesis; Naphthalene; Environmental chemistry; Methane; Polycyclic aromatic hydrocarbon; Enrichment culture; Biology; Metabolite; Hydrocarbon; Methanosaeta; Microbial biodegradation; Organic chemistry; Bacteria; Chemistry; Microorganism; Biochemistry; Ecology","score_opus":0.012617376570500853,"score_gpt":0.23497508173835113,"score_spread":0.22235770516785028,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037571984","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970292,0.00010289137,0.00005648326,0.00022216864,0.00074730144,0.00021748277,0.000015842315,0.00003948638,0.0015691525],"genre_scores_gemma":[0.9978799,0.000016425047,0.0011628141,0.00046332306,0.00005250186,0.000007149028,0.00009340405,0.00001186704,0.00031257965],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985964,0.00021950353,0.00038749512,0.00024746676,0.00004339073,0.00050576474],"domain_scores_gemma":[0.99930185,0.000106016705,0.000257708,0.00023247258,0.0000014998071,0.000100462865],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00040650004,0.00016687332,0.00028325233,0.00008403002,0.00006843618,0.0000033405167,0.00023753943,0.00022083327,0.0010555247],"category_scores_gemma":[0.000067243025,0.00014642633,0.000084473,0.00022969197,0.00036873546,0.000081726284,0.00013950057,0.0001247374,0.001637383],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009943132,0.000105325234,0.22872224,0.0000011612963,0.000022631191,3.8092227e-7,0.00014988883,7.2193376e-7,0.76970184,0.000011083214,0.0006914139,0.0005833691],"study_design_scores_gemma":[0.0009902028,0.00016125353,0.26466995,0.0000046433533,0.000059687914,0.00009562076,0.000048578437,0.00002577014,0.7280384,0.00021295,0.005384764,0.000308175],"about_ca_topic_score_codex":0.00010658138,"about_ca_topic_score_gemma":0.0007264883,"teacher_disagreement_score":0.041663446,"about_ca_system_score_codex":0.00011269385,"about_ca_system_score_gemma":0.0000149323305,"threshold_uncertainty_score":0.99985766},"labels":[],"label_agreement":null},{"id":"W2037685498","doi":"10.1016/j.jconhyd.2004.11.002","title":"Quantifying chlorinated ethene degradation during reductive dechlorination at Kelly AFB using stable carbon isotopes","year":2005,"lang":"en","type":"article","venue":"Journal of Contaminant Hydrology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":108,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; University of Toronto","funders":"National Research Council Canada; Natural Sciences and Engineering Research Council of Canada; U.S. Environmental Protection Agency","keywords":"Bioaugmentation; Chemistry; Biodegradation; Environmental chemistry; Reductive dechlorination; Microbial consortium; Vinyl chloride; Trichloroethylene; Reaction rate constant; Tetrachloroethylene; Isotopes of carbon; Volatile organic compound; Kinetic isotope effect; Organic chemistry; Total organic carbon; Bioremediation; Contamination; Microorganism; Kinetics; Bacteria","score_opus":0.023910811560991695,"score_gpt":0.25445339830196884,"score_spread":0.23054258674097713,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037685498","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99828035,0.00010810126,0.0001509195,0.00047334208,0.0004151752,0.00014070391,0.0000026452897,0.000012468455,0.00041629397],"genre_scores_gemma":[0.9984373,0.00012174524,0.00082586077,0.000059603986,0.000156903,8.0307836e-7,0.000002861303,0.000013290255,0.00038165064],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985187,0.00011989813,0.0005633567,0.00020195224,0.00029137576,0.00030469798],"domain_scores_gemma":[0.9989905,0.000040711486,0.0006960501,0.00011480592,0.00006405131,0.00009387882],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000571329,0.00015528682,0.00027411757,0.00013410489,0.00015285735,0.000018714507,0.0001725385,0.00013693448,0.00044507766],"category_scores_gemma":[0.000079926634,0.00013241117,0.000071965085,0.00021095836,0.000120145975,0.0004199116,0.00009611167,0.00020158292,0.00003580547],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027617902,0.00006795809,0.043580342,0.0000054460306,0.000020352474,0.000023381557,0.0004356913,0.0028641392,0.9510651,0.000012063797,0.000022598191,0.0016267399],"study_design_scores_gemma":[0.0014308665,0.0002537582,0.11176395,0.000034170203,0.000059671875,0.0004983488,0.00010375407,0.010529697,0.8702517,0.000023708522,0.0048188283,0.00023155224],"about_ca_topic_score_codex":0.0001777409,"about_ca_topic_score_gemma":0.0007067066,"teacher_disagreement_score":0.080813415,"about_ca_system_score_codex":0.0008012963,"about_ca_system_score_gemma":0.00003146668,"threshold_uncertainty_score":0.53995705},"labels":[],"label_agreement":null},{"id":"W2037798583","doi":"10.1128/aem.66.12.5393-5398.2000","title":"Anaerobic Oxidation of <i>n</i> -Dodecane by an Addition Reaction in a Sulfate-Reducing Bacterial Enrichment Culture","year":2000,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":164,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Office of Naval Research; Natural Sciences and Engineering Research Council of Canada","keywords":"Chemistry; Moiety; Metabolite; Trimethylsilyl; Chromatography; Enrichment culture; Alkane; Gas chromatography; Mass spectrometry; Stereochemistry; Organic chemistry; Hydrocarbon; Bacteria; Biochemistry","score_opus":0.0029980008466706115,"score_gpt":0.1703176843343062,"score_spread":0.16731968348763557,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037798583","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987393,0.000022706126,0.000004269166,0.00003138622,0.000050300852,0.00022967224,0.00020633578,0.000012187193,0.00070383854],"genre_scores_gemma":[0.9960678,0.00039316245,0.000215238,0.00014650503,0.000023477118,0.000008774501,0.0029718508,0.000008537091,0.00016461311],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990703,0.000046139172,0.00026837992,0.0003621174,0.000050593255,0.00020246471],"domain_scores_gemma":[0.99972063,0.00000762517,0.000093939394,0.00011666515,6.214776e-7,0.000060486065],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010537011,0.00015093153,0.00016241596,0.000025183914,0.000052477142,0.000007917611,0.000078699864,0.00015208797,0.0056536724],"category_scores_gemma":[9.1377404e-7,0.00013956182,0.000020307785,0.00007432182,0.00018626907,0.0001299067,0.00003716429,0.00008681511,0.00011895637],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008880726,0.00018980172,0.0011204672,0.0000023742468,0.0000041218136,4.44184e-7,0.0002829307,0.00002018879,0.98413485,0.0000022758775,0.0013576131,0.012796121],"study_design_scores_gemma":[0.001136569,0.00019688133,0.023558613,0.0000067733554,0.000011826832,0.000018504139,0.00020446294,0.00001596959,0.9477768,0.000021369051,0.026807174,0.00024507736],"about_ca_topic_score_codex":0.00022647188,"about_ca_topic_score_gemma":0.00007557385,"teacher_disagreement_score":0.036358077,"about_ca_system_score_codex":0.00013253081,"about_ca_system_score_gemma":0.0000027125282,"threshold_uncertainty_score":0.9952553},"labels":[],"label_agreement":null},{"id":"W2038162449","doi":"10.1016/j.jenvman.2014.11.014","title":"Rapid and effective decontamination of chlorophenol-contaminated soil by sorption into commercial polymers: Concept demonstration and process modeling","year":2014,"lang":"en","type":"article","venue":"Journal of Environmental Management","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Human decontamination; Contamination; Extraction (chemistry); Environmental remediation; Water content; Pentachlorophenol; Sorption; Moisture; Polymer; Chemistry; Chlorophenol; Soil water; Soil contamination; Partition coefficient; Solid-phase microextraction; Environmental chemistry; Chromatography; Adsorption; Environmental science; Waste management; Soil science; Gas chromatography–mass spectrometry; Mass spectrometry; Geotechnical engineering; Phenol","score_opus":0.0027214333858641693,"score_gpt":0.18691043816940692,"score_spread":0.18418900478354275,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2038162449","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99497366,0.0001673375,0.0040804837,0.00010977752,0.000065394226,0.00026095123,0.0000059221193,0.000003826397,0.00033266735],"genre_scores_gemma":[0.9991993,0.00036462912,0.0002652369,0.000099359844,0.000020922549,0.0000025253885,0.000010477413,0.000007735358,0.000029825584],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9990156,0.0000821453,0.0003643542,0.00016167841,0.0002634623,0.00011272451],"domain_scores_gemma":[0.9994958,0.000022530045,0.0003427151,0.000059917176,0.0000050362555,0.000074008734],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003437841,0.00012565986,0.00017295546,0.000054648273,0.00007576956,0.00002013554,0.00008056722,0.000055823373,0.00020731056],"category_scores_gemma":[0.000008890394,0.00011279475,0.000031692398,0.000053231935,0.00016670472,0.0003368782,0.00007025193,0.000081512175,0.000004421413],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001631675,0.00025330987,0.0149586545,0.000049184408,0.00006349963,0.000001899877,0.0015271018,0.00057870924,0.4264971,0.000023602795,0.00009364346,0.5557901],"study_design_scores_gemma":[0.010409582,0.0031852073,0.54408664,0.0002570891,0.00051541976,0.000057454075,0.0064360276,0.058995474,0.37324306,0.00086687936,0.0009738056,0.0009733901],"about_ca_topic_score_codex":0.000026573869,"about_ca_topic_score_gemma":0.000015727446,"teacher_disagreement_score":0.5548167,"about_ca_system_score_codex":0.00012704474,"about_ca_system_score_gemma":0.0000016489075,"threshold_uncertainty_score":0.45996365},"labels":[],"label_agreement":null},{"id":"W2038266959","doi":"10.1007/s00248-001-1047-z","title":"Effectiveness of Bioremediation of Crude Oil Contaminated Subantarctic Intertidal Sediment: The Microbial Response","year":2002,"lang":"en","type":"article","venue":"Microbial Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":60,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Rimouski","funders":"Natural Sciences and Engineering Research Council of Canada; Polar Knowledge Canada","keywords":"Bioremediation; Biodegradation; Environmental chemistry; Sediment; Biology; Contamination; Microorganism; Microbial biodegradation; Intertidal zone; Degradation (telecommunications); Ecology; Chemistry; Bacteria","score_opus":0.007033850758752269,"score_gpt":0.19967446366510558,"score_spread":0.19264061290635331,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2038266959","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982896,0.000023054952,0.0000114971635,0.00050776755,0.0005806949,0.00026602784,0.00007155006,0.000020042437,0.0002297848],"genre_scores_gemma":[0.99933255,0.000033546974,0.00008658157,0.000226611,0.000026430427,0.000006181462,0.000022667045,0.0000144671785,0.00025097802],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99780184,0.0009093626,0.00051130593,0.00030885384,0.0001472065,0.00032140472],"domain_scores_gemma":[0.99879605,0.00051407213,0.00032846554,0.00025817117,0.000045414796,0.000057811543],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010805113,0.00018529117,0.00032818737,0.000083313185,0.00008725866,0.000009750124,0.00036597,0.00018964251,0.0045766765],"category_scores_gemma":[0.00024124912,0.00014306774,0.00011687691,0.0003423566,0.00067887345,0.000089257264,0.0001882254,0.00015917623,0.00037133487],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011067404,0.00026938535,0.014827174,0.00004870682,0.000031401607,0.000004060176,0.00074029,0.000027485272,0.98056805,0.0000043287646,0.0015884932,0.0007838579],"study_design_scores_gemma":[0.0014224855,0.00032292816,0.18006662,0.000029692328,0.000034280994,0.000018230397,0.00004347381,0.000052456962,0.8162764,0.0000046198256,0.0015888837,0.00013996313],"about_ca_topic_score_codex":0.0002815467,"about_ca_topic_score_gemma":0.0005934494,"teacher_disagreement_score":0.16523945,"about_ca_system_score_codex":0.0002462606,"about_ca_system_score_gemma":0.000022551043,"threshold_uncertainty_score":0.9963333},"labels":[],"label_agreement":null},{"id":"W2038446208","doi":"10.1007/s11356-014-2958-9","title":"Combined effects of DOM and biosurfactant enhanced biodegradation of polycylic armotic hydrocarbons (PAHs) in soil–water systems","year":2014,"lang":"en","type":"article","venue":"Environmental Science and Pollution Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina; University of New Brunswick","funders":"Natural Sciences and Engineering Research Council of Canada; National Science Foundation","keywords":"Biodegradation; Ecotoxicology; Environmental chemistry; Environmental science; Hydrocarbon; Soil contamination; Chemistry; Environmental engineering; Soil water; Soil science","score_opus":0.008867989657741016,"score_gpt":0.23643194511493928,"score_spread":0.22756395545719826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2038446208","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988575,0.00005612176,0.00004517902,0.00018089166,0.000072002505,0.00036601195,0.000009134967,0.0000051360976,0.00040803946],"genre_scores_gemma":[0.9996561,0.00019530127,0.000034623852,0.000027046935,0.000006924262,0.000004905468,0.0000050411495,0.000004586161,0.00006551346],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99794996,0.00023248656,0.0002782877,0.00034330453,0.00081985054,0.0003761297],"domain_scores_gemma":[0.99953455,0.00007749952,0.000073340234,0.00017033848,0.000005065978,0.0001392014],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022304754,0.0001057573,0.00016750874,0.00019990014,0.00015995943,0.00002829038,0.00018192436,0.000064979744,0.000061284416],"category_scores_gemma":[0.00010144841,0.00007824921,0.000016450407,0.00045440876,0.0021098214,0.0002290597,0.00023489656,0.00011400237,0.00003292535],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026540207,0.000090493224,0.024525348,0.00002144031,0.0000016731199,3.9602722e-7,0.00036893177,0.000022413655,0.97234887,0.00004957571,0.000013273897,0.0025310367],"study_design_scores_gemma":[0.000512436,0.0002449741,0.26488388,0.000029253486,0.0000026907053,0.000001286978,0.00018860945,0.0022361109,0.73169136,0.00006451166,0.000059227037,0.00008563698],"about_ca_topic_score_codex":0.0008466509,"about_ca_topic_score_gemma":0.00006124487,"teacher_disagreement_score":0.2406575,"about_ca_system_score_codex":0.00017009454,"about_ca_system_score_gemma":0.000015375632,"threshold_uncertainty_score":0.7773725},"labels":[],"label_agreement":null},{"id":"W2038602873","doi":"10.1002/ep.670200212","title":"Comparison of biodegradation kinetic parameters for naphthalene in batch and sand column systems by <i>pseudomonas putida</i>","year":2001,"lang":"en","type":"article","venue":"Environmental Progress","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Naphthalene; Biodegradation; Pseudomonas putida; Chemistry; Degradation (telecommunications); Saturation (graph theory); Substrate (aquarium); Kinetics; Chromatography; Volumetric flow rate; Liquid flow; Reaction rate constant; Biomass (ecology); Chemical engineering; Environmental chemistry; Environmental engineering; Thermodynamics; Environmental science; Ecology; Organic chemistry","score_opus":0.014303533291642186,"score_gpt":0.2532786714187985,"score_spread":0.23897513812715632,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2038602873","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977711,0.00095163344,0.000071084214,0.00009535233,0.00008575772,0.0007781796,0.000111062174,0.000010771137,0.00012510146],"genre_scores_gemma":[0.9988434,0.00015940539,0.0006766605,0.000031487114,0.000007912166,0.000023822307,0.00011349299,0.00001216889,0.00013170484],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99883807,0.0000501634,0.00035085852,0.00030564828,0.00022515458,0.00023009765],"domain_scores_gemma":[0.9995885,0.000040313585,0.00016413671,0.00012540656,0.0000011817391,0.000080449914],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017162175,0.00014490307,0.00021641323,0.000027588214,0.000053937434,0.000025728525,0.000114861534,0.00008592534,0.00014776594],"category_scores_gemma":[0.0000055599203,0.00013770371,0.00003069997,0.00009932349,0.00036301574,0.00011712179,0.00006862593,0.000060432198,0.000024441428],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007751704,0.00032882468,0.8041117,0.000019262534,0.0000068955096,0.0000013887583,0.00021402436,0.000072222385,0.1870274,0.0000017776831,0.0012675088,0.0068714805],"study_design_scores_gemma":[0.0056789466,0.0014457775,0.52766824,0.00012539534,0.0000683309,0.00004798739,0.0017037437,0.0129702715,0.4234722,0.000042532985,0.025711568,0.0010650207],"about_ca_topic_score_codex":0.00013648665,"about_ca_topic_score_gemma":0.000024173038,"teacher_disagreement_score":0.27644345,"about_ca_system_score_codex":0.000102295795,"about_ca_system_score_gemma":0.000001967808,"threshold_uncertainty_score":0.5615394},"labels":[],"label_agreement":null},{"id":"W2039162340","doi":"10.1002/cjce.20445","title":"Aerobic granular treatment of 2,4‐dichlorophenol","year":2011,"lang":"en","type":"article","venue":"The Canadian Journal of Chemical Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Granulation; Degradation (telecommunications); Effluent; 2,4-Dichlorophenol; Chemistry; Sequencing batch reactor; Substrate (aquarium); Chemical oxygen demand; Chromatography; Chemical engineering; Nuclear chemistry; Materials science; Environmental engineering; Wastewater; Bacteria; Biology; Environmental science","score_opus":0.01327455118212082,"score_gpt":0.1661694438213596,"score_spread":0.15289489263923878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039162340","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99919766,0.00007406653,0.000028021495,0.00008198048,0.00010713322,0.000038680264,0.0000025893241,0.0000025735596,0.00046730557],"genre_scores_gemma":[0.99944466,0.000004079787,0.00046689092,0.000026026932,0.000033759312,2.423613e-7,4.1624796e-7,0.0000057116645,0.000018211718],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99954325,0.0000057332522,0.00017984239,0.000043483415,0.00008835908,0.00013934638],"domain_scores_gemma":[0.99961615,0.000010371077,0.00007148321,0.00008273055,0.000009951941,0.0002093448],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007799474,0.000066627996,0.00010440159,0.000027234151,0.00001864403,0.000005076239,0.00016418443,0.000035344245,0.0010624474],"category_scores_gemma":[0.000022279606,0.000042591004,0.000060757007,0.00009111974,0.0000614412,0.000038645783,0.000006112661,0.000057622103,0.000024228062],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000101556525,0.00001831414,0.0028972118,0.0000030138874,0.000017833634,0.000018990917,0.0010989598,0.0002601042,0.99431396,0.000051480176,0.00020898998,0.0011009844],"study_design_scores_gemma":[0.00026338088,0.00007688357,0.0030442583,0.000012582401,0.000021763082,0.00004600805,0.000008936358,0.00015480169,0.99368304,0.00004127598,0.00256903,0.00007806194],"about_ca_topic_score_codex":0.0023837944,"about_ca_topic_score_gemma":0.0004104257,"teacher_disagreement_score":0.00236004,"about_ca_system_score_codex":0.00017610031,"about_ca_system_score_gemma":0.0000407794,"threshold_uncertainty_score":0.9998507},"labels":[],"label_agreement":null},{"id":"W2039206393","doi":"10.1046/j.1365-2672.2000.01011.x","title":"Optimization of high-molecular-weight polycyclic aromatic hydrocarbons' degradation in a two-liquid-phase bioreactor","year":2000,"lang":"en","type":"article","venue":"Journal of Applied Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":104,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Armand Frappier Museum; Institut National de la Recherche Scientifique","funders":"","keywords":"Degradation (telecommunications); Bioreactor; Biodegradation; Polycyclic aromatic hydrocarbon; Phase (matter); Chemistry; Chromatography; Hydrocarbon; Liquid phase; Environmental chemistry; Organic chemistry","score_opus":0.004592750726241164,"score_gpt":0.22349509879930293,"score_spread":0.21890234807306178,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039206393","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99787045,0.000029859124,0.0006195372,0.00017624891,0.0000965446,0.00017216486,0.000008888305,0.0000067592086,0.0010195315],"genre_scores_gemma":[0.9943004,0.00007324906,0.005252453,0.00026852574,0.000025953299,0.0000013416768,0.000043088556,0.000011116742,0.000023835895],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987358,0.000067244415,0.00072367734,0.00017154303,0.00009380191,0.00020794831],"domain_scores_gemma":[0.9992606,0.00003607858,0.0004968937,0.00013331074,0.0000034763887,0.000069647045],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00027672134,0.00014601735,0.0003183977,0.00014077469,0.000022354936,0.000007679199,0.00021382803,0.00011413898,0.0010638811],"category_scores_gemma":[0.000014642756,0.000119985976,0.0000698039,0.00031985043,0.00014903981,0.00008747271,0.000026475347,0.00015426076,0.000073265466],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000512976,0.0002793305,0.00019904658,0.000002374168,0.000016571901,0.000008558258,0.000120952536,0.0015632531,0.9940575,0.0000121796875,0.00014680288,0.003080506],"study_design_scores_gemma":[0.004643824,0.00042066313,0.0006722853,0.000029881006,0.00004308866,0.000111020505,0.000033249624,0.00030417278,0.99214417,0.0001873724,0.0011860941,0.00022419654],"about_ca_topic_score_codex":0.00006439953,"about_ca_topic_score_gemma":0.00004672128,"teacher_disagreement_score":0.004632916,"about_ca_system_score_codex":0.00012301325,"about_ca_system_score_gemma":0.00003077825,"threshold_uncertainty_score":0.99984926},"labels":[],"label_agreement":null},{"id":"W2039419585","doi":"10.1038/sj.jim.7000168","title":"Multiple mutations at the active site of naphthalene dioxygenase affect regioselectivity and enantioselectivity","year":2001,"lang":"en","type":"article","venue":"Journal of Industrial Microbiology & Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Queen's University","keywords":"Dioxygenase; Chemistry; Stereochemistry; Active site; Naphthalene; Enzyme; Regioselectivity; Amino acid; Phenanthrene; Biphenyl; Mutant; Enantiomer; Biochemistry; Organic chemistry; Catalysis","score_opus":0.01677318246013712,"score_gpt":0.2266231785877762,"score_spread":0.20984999612763908,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039419585","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964172,0.00011832551,0.00006142081,0.002716974,0.0002626216,0.00027373774,0.00007882821,0.000015932192,0.00005492146],"genre_scores_gemma":[0.99933445,0.00029583625,0.000106931235,0.00009082666,0.00007104928,0.0000014618121,0.00000854154,0.000008777241,0.00008213981],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99856347,0.00033613178,0.0004604302,0.0002558793,0.00008176237,0.0003023083],"domain_scores_gemma":[0.9985496,0.00037734187,0.0007587669,0.00020204992,0.00004794313,0.000064314176],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006555755,0.00018149024,0.00040279637,0.00014934017,0.00018828071,0.000007635492,0.0002477246,0.0006872739,0.0002961706],"category_scores_gemma":[0.0007324115,0.00011839991,0.00012690156,0.0005801293,0.0012050092,0.00011874467,0.00023873472,0.0006313193,0.000029702953],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041959004,0.0001175201,0.08803542,0.0000012132749,0.000060919316,0.00001667589,0.00008234272,0.00001192391,0.8993477,0.000004339564,0.0016622773,0.010240028],"study_design_scores_gemma":[0.0016094206,0.00063286006,0.023417223,0.000016521357,0.000045185247,0.0017519814,0.0000724482,0.0000076243477,0.96205485,0.000038008366,0.010216436,0.00013741505],"about_ca_topic_score_codex":0.0001553565,"about_ca_topic_score_gemma":0.0011181878,"teacher_disagreement_score":0.0646182,"about_ca_system_score_codex":0.0002157896,"about_ca_system_score_gemma":0.00005312438,"threshold_uncertainty_score":0.5300886},"labels":[],"label_agreement":null},{"id":"W2039427240","doi":"10.1016/s0013-7952(00)00117-4","title":"Surfactant-enhanced remediation of contaminated soil: a review","year":2001,"lang":"en","type":"review","venue":"Engineering Geology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1019,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Chemistry; Environmental remediation; Environmental chemistry; Pulmonary surfactant; Solubility; Soil contamination; Dissolved organic carbon; Organic matter; Biodegradation; Soil water; Contamination; Organic chemistry; Environmental science","score_opus":0.01394425505431103,"score_gpt":0.24952691533398746,"score_spread":0.23558266027967645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039427240","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015752173,0.99761945,0.00024646157,0.000030002222,0.00045073777,0.0006194318,0.000020804517,0.00007297878,0.000782632],"genre_scores_gemma":[0.00026840367,0.9987039,0.00020282053,0.00005782922,0.000042442924,0.000018080324,0.0001814821,0.00003091333,0.0004941249],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.998309,0.00008993066,0.00074653624,0.0003519581,0.00018499435,0.00031755777],"domain_scores_gemma":[0.99902886,0.0001132279,0.000444743,0.00031217228,0.000018127877,0.000082875595],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00032956255,0.0003271869,0.0012804018,0.000080281265,0.000017708471,0.0000037266373,0.00029784103,0.0003339664,0.003525029],"category_scores_gemma":[0.0002602487,0.00027959645,0.00021921097,0.0005841302,0.000069494585,0.0000534936,0.000117286334,0.0002626703,0.0007861786],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000052960595,0.000088805544,0.00007607766,0.029779213,0.00014022032,0.000027555114,0.00005388054,0.00022190658,0.003212975,0.000023983228,0.007151373,0.95921874],"study_design_scores_gemma":[0.00011614591,0.000038114722,0.00006898164,0.005857873,0.00016517112,0.000026391157,6.912377e-7,0.00005049116,0.00015548001,0.0000011576903,0.99322313,0.00029637926],"about_ca_topic_score_codex":0.00004480089,"about_ca_topic_score_gemma":0.000028707107,"teacher_disagreement_score":0.98607177,"about_ca_system_score_codex":0.00014878914,"about_ca_system_score_gemma":0.0000340148,"threshold_uncertainty_score":0.99999183},"labels":[],"label_agreement":null},{"id":"W2039506001","doi":"10.1021/es202792x","title":"Monitoring Biodegradation of Ethene and Bioremediation of Chlorinated Ethenes at a Contaminated Site Using Compound-Specific Isotope Analysis (CSIA)","year":2011,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Bioremediation; Microcosm; Reductive dechlorination; Environmental chemistry; Chemistry; Dehalococcoides; Biodegradation; Vinyl chloride; Environmental remediation; Biotransformation; Isotope analysis; Cometabolism; Human decontamination; Contamination; Organic chemistry; Waste management; Ecology; Biology","score_opus":0.023759695735741694,"score_gpt":0.22217134352572174,"score_spread":0.19841164778998005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039506001","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99922,0.00009014392,0.00021872013,0.000031207866,0.00008215681,0.0001972672,0.000027138834,0.00003257597,0.000100790276],"genre_scores_gemma":[0.9975001,0.00025684352,0.0021941196,0.000005720599,0.000004658696,0.0000024694025,0.000010342786,0.0000067999126,0.000018917197],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99851894,0.000031947107,0.0003751054,0.00043454792,0.0003725439,0.0002669288],"domain_scores_gemma":[0.9992639,0.000014718222,0.00036385728,0.00027598528,0.0000101357255,0.00007141706],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00037717138,0.00015179563,0.00025074236,0.0005314837,0.00016807413,0.0000076101933,0.00030206976,0.000143983,0.00053166953],"category_scores_gemma":[0.000017749071,0.00013952063,0.000046981502,0.002108749,0.0030183739,0.00026591634,0.00040028564,0.0000850325,0.000027141019],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001404046,0.000053282747,0.4131089,0.0000014502878,0.000010226969,7.5069016e-7,0.00037268686,0.0000237692,0.5846986,0.000011877948,4.0258888e-7,0.0017040133],"study_design_scores_gemma":[0.00016454594,0.00006399119,0.38103637,0.0000052889195,0.000033784025,0.000003521527,0.00021193252,0.00073650293,0.6175861,0.000025047064,0.000041682564,0.00009128945],"about_ca_topic_score_codex":0.00025411427,"about_ca_topic_score_gemma":0.00004131952,"teacher_disagreement_score":0.032887448,"about_ca_system_score_codex":0.00034687802,"about_ca_system_score_gemma":0.0000075327166,"threshold_uncertainty_score":0.9996948},"labels":[],"label_agreement":null},{"id":"W2040376582","doi":"10.1021/es801540h","title":"Three Year Field Test of a Plant Growth Promoting Rhizobacteria Enhanced Phytoremediation System at a Land Farm for Treatment of Hydrocarbon Waste","year":2009,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":156,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Phytoremediation; Rhizobacteria; Rhizosphere; Bioremediation; Environmental remediation; Environmental science; Total petroleum hydrocarbon; Soil contamination; Biomass (ecology); Soil water; Agronomy; Contamination; Biology; Ecology; Soil science; Bacteria","score_opus":0.004651037343678796,"score_gpt":0.18747969868276776,"score_spread":0.18282866133908895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040376582","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985636,0.000014100168,0.0001525803,0.00017259154,0.0000919933,0.0005916072,0.00007669856,0.000039563412,0.0002973034],"genre_scores_gemma":[0.9991098,0.000028261848,0.00076595566,0.000017428243,0.000019978303,0.000015931817,0.000016810714,0.000005781632,0.000020017424],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987393,0.000007166696,0.0003064597,0.000375429,0.00026941058,0.00030222666],"domain_scores_gemma":[0.9994099,0.000033877874,0.00027363395,0.00021812475,0.0000040213035,0.0000604026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015647519,0.00014656929,0.00022292182,0.00011743149,0.00010983717,0.000006354244,0.00027606176,0.0001160131,0.000074235126],"category_scores_gemma":[0.000045761924,0.00011920971,0.00004995773,0.00034882018,0.0004256994,0.00008494056,0.00009581466,0.000030648043,0.000024407125],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003822469,0.00018075235,0.08134388,0.000007093173,0.00000277021,6.781276e-7,0.00017219681,0.0000034844743,0.91397697,0.000024428484,0.000007606438,0.0042419005],"study_design_scores_gemma":[0.0006232448,0.001578044,0.029563788,0.000020193116,0.000011696444,0.0000054461093,0.00011444822,0.00048430925,0.9673238,0.000067254055,0.000091295915,0.000116486255],"about_ca_topic_score_codex":0.000035020857,"about_ca_topic_score_gemma":0.00009774006,"teacher_disagreement_score":0.05334681,"about_ca_system_score_codex":0.0005816595,"about_ca_system_score_gemma":0.000012072212,"threshold_uncertainty_score":0.4861231},"labels":[],"label_agreement":null},{"id":"W2041849638","doi":"10.1128/jb.182.8.2191-2199.2000","title":"Roles of Horizontal Gene Transfer and Gene Integration in Evolution of 1,3-Dichloropropene- and 1,2-Dibromoethane-Degradative Pathways","year":2000,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":97,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Quest University Canada","funders":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Rijksuniversiteit Groningen","keywords":"Biology; Gene cluster; Gene; Biochemistry; Gene product; Horizontal gene transfer; Genetics; Gene expression; Molecular biology; Phylogenetic tree","score_opus":0.008778588770189456,"score_gpt":0.19739683195316443,"score_spread":0.188618243182975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041849638","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99940413,0.00019433905,0.000115597504,0.000064332875,0.000042534557,0.00007431399,0.00002383249,0.0000013089514,0.000079627855],"genre_scores_gemma":[0.9985436,0.0007422739,0.0006651307,0.00001500515,0.000017528411,3.3043563e-7,0.000004278561,0.0000035379942,0.000008287393],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992035,0.000101950194,0.00041774014,0.000099272576,0.00008907032,0.00008849138],"domain_scores_gemma":[0.99972534,0.00002114053,0.00014519598,0.000045779096,0.000018408808,0.000044144446],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026763245,0.000078279125,0.00023859112,0.00005983714,0.0000142663675,0.0000037488767,0.00006653859,0.0000853147,0.00048117127],"category_scores_gemma":[0.000016519549,0.000057514473,0.000030253075,0.00008212894,0.00019518594,0.00016975046,0.000017010823,0.00009400561,0.0000023954037],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002744011,0.000046662666,0.024980279,0.000003940625,0.000007250887,0.0000035770825,0.00063309504,0.0000067422816,0.95243984,0.000009683635,0.000006062539,0.02158846],"study_design_scores_gemma":[0.0006924141,0.0006624254,0.48776567,0.000024745847,0.000010467917,0.0001016646,0.00013184079,0.00005147,0.51036066,0.000087970184,0.00005234807,0.000058323578],"about_ca_topic_score_codex":0.00011897967,"about_ca_topic_score_gemma":0.00033110182,"teacher_disagreement_score":0.4627854,"about_ca_system_score_codex":0.000054969467,"about_ca_system_score_gemma":0.000017708304,"threshold_uncertainty_score":0.5268488},"labels":[],"label_agreement":null},{"id":"W2042091043","doi":"10.1002/tox.20285","title":"Phytotoxicity assay of crop plants to phenanthrene and pyrene contaminants in acidic soil","year":2007,"lang":"en","type":"article","venue":"Environmental Toxicology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Phenanthrene; Pyrene; Shoot; Phytotoxicity; Germination; Chemistry; Soil contamination; Agronomy; Contamination; Crop; Horticulture; Environmental chemistry; Biology; Organic chemistry","score_opus":0.0076567818752605555,"score_gpt":0.2247820717786334,"score_spread":0.21712528990337285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042091043","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982803,0.000086894455,0.0001257684,0.000108846405,0.00017941475,0.00030804373,0.000056810026,0.000010756172,0.0008432002],"genre_scores_gemma":[0.99871135,0.00017648682,0.00035065116,0.00052760256,0.000026844882,0.0000041165868,0.0000114492805,0.000011982239,0.00017950275],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985163,0.00007585548,0.0003852078,0.00038274945,0.00021004255,0.00042980642],"domain_scores_gemma":[0.9994578,0.00007373847,0.00011788035,0.00016379585,8.003477e-7,0.00018602647],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000614691,0.00017629977,0.00026386674,0.00007702645,0.000050181294,0.000005141004,0.00016679816,0.00016176791,0.0019125711],"category_scores_gemma":[0.000029715764,0.00016413796,0.00003097274,0.000116643656,0.0005117083,0.00008574181,0.00027024827,0.00012107154,0.0003110222],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009456596,0.0002363126,0.2316415,0.000003125053,0.000004459007,0.00002877038,0.0002436529,0.0000201406,0.7531169,0.0000036084746,0.0001712371,0.014435723],"study_design_scores_gemma":[0.0004892653,0.00014759017,0.52006596,0.0000055783416,0.0000027950236,0.0000088911565,0.00006924527,0.000025103613,0.47798675,0.000009273202,0.0010751545,0.00011440673],"about_ca_topic_score_codex":0.00015675095,"about_ca_topic_score_gemma":0.0025966635,"teacher_disagreement_score":0.28842446,"about_ca_system_score_codex":0.00022168456,"about_ca_system_score_gemma":0.0000053885447,"threshold_uncertainty_score":0.99899983},"labels":[],"label_agreement":null},{"id":"W2042615372","doi":"10.1100/tsw.2002.220","title":"Toxicity of Flare and Crude Hydrocarbon Mixtures","year":2002,"lang":"en","type":"article","venue":"The Scientific World JOURNAL","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"European Social Fund; Natural Sciences and Engineering Research Council of Canada","keywords":"Toxicity; Chemistry; Lumbricus terrestris; Asphaltene; Hydrocarbon; Aromatic hydrocarbon; Fraction (chemistry); Chromatography; Crude oil; Environmental chemistry; Organic chemistry; Biology","score_opus":0.013027819070691634,"score_gpt":0.20057325565240702,"score_spread":0.18754543658171538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042615372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99132997,0.00019290122,0.000007478038,0.001452408,0.00045118367,0.00005792081,0.0000050370168,0.000006362605,0.006496733],"genre_scores_gemma":[0.99101985,0.00003465447,0.00012907154,0.00015458632,0.000045826022,1.56983e-7,4.2783742e-7,0.0000029163034,0.008612542],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99914116,0.00006220414,0.00017831131,0.00013064612,0.00032526962,0.0001623967],"domain_scores_gemma":[0.9996244,0.000022965152,0.000119395205,0.00014418244,0.000009568895,0.00007951347],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006664131,0.00006621097,0.00007568474,0.00004832416,0.0003337569,0.00012177393,0.00024613444,0.000018380126,0.0061638816],"category_scores_gemma":[0.000031347423,0.000038523707,0.000040093604,0.00035332714,0.00047306088,0.0001015267,0.000093546674,0.00013858255,0.00015274133],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000048382435,0.000036610436,0.0054329936,0.0000017730379,0.000004595322,0.000002221324,0.0006312533,0.000019964,0.93303525,0.000012589156,0.05480762,0.0060102874],"study_design_scores_gemma":[0.0007096873,0.000066041284,0.062289085,0.000052967906,0.000038675244,0.00018321427,0.00017525403,0.0021938938,0.8495469,0.0014575082,0.08296115,0.000325633],"about_ca_topic_score_codex":0.000007725471,"about_ca_topic_score_gemma":0.00016459476,"teacher_disagreement_score":0.08348836,"about_ca_system_score_codex":0.000027604807,"about_ca_system_score_gemma":0.0000035313933,"threshold_uncertainty_score":0.9947446},"labels":[],"label_agreement":null},{"id":"W2042647564","doi":"10.7901/2169-3358-2003-1-977","title":"Habitat Recovery in an Oil-Contaminated Salt Marsh Following Biorestoration Treatments","year":2003,"lang":"en","type":"article","venue":"International Oil Spill Conference Proceedings","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Biotechnology Research Institute; National Research Council Canada; Bedford Institute of Oceanography; Environment and Climate Change Canada; Fisheries and Oceans Canada","funders":"U.S. Environmental Protection Agency","keywords":"Nutrient; Spartina alterniflora; Salt marsh; Biostimulation; Environmental science; Wetland; Bioremediation; Environmental remediation; Spartina; Petroleum; Environmental chemistry; Contamination; Marsh; Agronomy; Ecology; Chemistry; Biology","score_opus":0.01684382376072693,"score_gpt":0.24637519642067413,"score_spread":0.2295313726599472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042647564","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9613774,0.00000800584,0.000015364434,0.00032646832,0.0005513296,0.00006295511,0.000014011172,0.000049001097,0.037595466],"genre_scores_gemma":[0.9964054,0.00006389691,0.00095582404,0.0003165751,0.000027302889,0.000018357381,0.00005647066,0.000014721158,0.002141441],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985014,0.000022931084,0.0003480428,0.00044406706,0.0004141071,0.00026941774],"domain_scores_gemma":[0.99955636,0.000016662725,0.00015995828,0.00007746856,0.000072391085,0.000117129806],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00028251312,0.00020252763,0.00015912666,0.00012546233,0.00006743361,0.00017762704,0.00029012444,0.00011674562,0.0014101253],"category_scores_gemma":[0.00017713793,0.00019189723,0.00006305723,0.00025581726,0.0000603172,0.0010034676,0.000052950574,0.00012166266,0.00032224302],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006327116,0.00020239566,0.60063595,0.000006400809,0.000024091401,0.000013684579,0.0007156051,0.0000080447635,0.37565672,0.0006313975,0.00027888993,0.02176354],"study_design_scores_gemma":[0.006375291,0.0008688428,0.8065486,0.00038710836,0.00007802981,0.000044325283,0.0016918995,0.0038327004,0.15288565,0.0029996447,0.022407267,0.001880681],"about_ca_topic_score_codex":0.00017692409,"about_ca_topic_score_gemma":0.000812491,"teacher_disagreement_score":0.2227711,"about_ca_system_score_codex":0.00052803755,"about_ca_system_score_gemma":0.00003497365,"threshold_uncertainty_score":0.9995027},"labels":[],"label_agreement":null},{"id":"W2042741486","doi":"10.1038/sj.jim.7000040","title":"Degradation of p -nitrophenol and pentachlorophenol mixtures by Sphingomonas sp. UG30 in soil perfusion bioreactors","year":2000,"lang":"en","type":"article","venue":"Journal of Industrial Microbiology & Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Pentachlorophenol; Bioreactor; Mineralization (soil science); Chemistry; Sphingomonas; Biodegradation; Ammonium; Microcosm; Degradation (telecommunications); Environmental chemistry; Soil water; Bioaugmentation; Chromatography; Nuclear chemistry; Nitrogen; Contamination; Bioremediation; Biochemistry; Biology; Organic chemistry; Ecology","score_opus":0.009433241618257888,"score_gpt":0.20228304395030838,"score_spread":0.19284980233205049,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042741486","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99734956,0.00026413365,0.0000064891315,0.0018079946,0.0002487356,0.00017915461,0.00005080092,0.000013403306,0.00007971647],"genre_scores_gemma":[0.998588,0.0008781131,0.0002249733,0.00014778071,0.00005559193,6.261701e-7,0.00002268454,0.000011201354,0.00007101577],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984102,0.00013800249,0.000796371,0.00026552778,0.0000941901,0.0002957076],"domain_scores_gemma":[0.999143,0.000055261677,0.00055756036,0.00015373067,0.000019739333,0.00007071105],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00040416,0.00020466442,0.00043639707,0.00022494029,0.00005634188,0.00001084635,0.00034339228,0.0009774885,0.0020505332],"category_scores_gemma":[0.000117015144,0.00016172907,0.00007558421,0.0003760865,0.00063129584,0.00013078346,0.00010800001,0.00067053485,0.000035024772],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027496484,0.0001415185,0.022165142,0.0000017937188,0.00001398533,0.000009292552,0.000063930645,0.0000070716897,0.92218214,0.00000453082,0.0030127002,0.05212294],"study_design_scores_gemma":[0.0021193412,0.0006567157,0.0018874669,0.000039349405,0.000026302532,0.0002588907,0.0001258014,0.0000064069477,0.97849965,0.000047923877,0.016141986,0.00019013563],"about_ca_topic_score_codex":0.00039706487,"about_ca_topic_score_gemma":0.00011111757,"teacher_disagreement_score":0.05631755,"about_ca_system_score_codex":0.00014798158,"about_ca_system_score_gemma":0.00003816604,"threshold_uncertainty_score":0.99886173},"labels":[],"label_agreement":null},{"id":"W2043299049","doi":"10.1007/s00253-002-1104-7","title":"Kinetics of biodegradation of mixtures of polycyclic aromatic hydrocarbons","year":2002,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":54,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Fluoranthene; Chrysene; Phenanthrene; Pyrene; Environmental chemistry; Biodegradation; Chemistry; Kinetics; Degradation (telecommunications); Soil contamination; Creosote; Anthracene; Microbial biodegradation; Organic chemistry; Contamination; Ecology; Microorganism","score_opus":0.006799988443568807,"score_gpt":0.17890602576736658,"score_spread":0.17210603732379778,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043299049","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982525,0.00019586897,0.00010002099,0.00040702405,0.00003644914,0.00013249443,0.000020676289,0.000017903354,0.00083705835],"genre_scores_gemma":[0.99826264,0.0002425157,0.0013772224,0.00006591698,0.0000030008737,0.0000012005032,0.000015988553,0.000004056891,0.00002743851],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99931157,0.000018657372,0.0003248973,0.0001784877,0.000029579089,0.00013682048],"domain_scores_gemma":[0.9995179,0.00003393188,0.0002571849,0.00017175062,0.0000011880344,0.000018042916],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000053862164,0.00010075143,0.00023987821,0.00008687873,0.000015569321,7.5652343e-7,0.00015316784,0.00038174214,0.00013547912],"category_scores_gemma":[0.000016954127,0.00008224564,0.000029358742,0.0002185793,0.0010643583,0.000011672902,0.000090327085,0.00008372558,0.000020952251],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012604332,0.00010713408,0.0011381721,0.000008376832,0.000015124214,1.8270971e-7,0.0000637763,3.43938e-7,0.992692,0.00019899398,0.00027493757,0.0054883678],"study_design_scores_gemma":[0.00028504507,0.00013950974,0.0013332018,0.0000056964536,0.000017599794,0.000012324607,0.000028672754,0.000011669505,0.99683577,0.0003601539,0.00089418644,0.00007616637],"about_ca_topic_score_codex":0.00002735151,"about_ca_topic_score_gemma":0.000028678405,"teacher_disagreement_score":0.0054122014,"about_ca_system_score_codex":0.000008651938,"about_ca_system_score_gemma":0.0000012194514,"threshold_uncertainty_score":0.39216724},"labels":[],"label_agreement":null},{"id":"W2043769517","doi":"10.1016/s0032-9592(01)00325-9","title":"De-emulsification of petroleum oil emulsion by a mixed bacterial culture","year":2002,"lang":"en","type":"article","venue":"Process Biochemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":73,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Emulsion; Kerosene; Pulmonary surfactant; Petroleum; Chemistry; Chromatography; Food science; Substrate (aquarium); Biochemistry; Organic chemistry; Biology; Ecology","score_opus":0.005777959628571876,"score_gpt":0.20251478513336735,"score_spread":0.19673682550479546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043769517","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99433416,0.000094449555,0.00001971234,0.0001700902,0.0000464415,0.000024864032,0.00006455961,0.000025919213,0.0052197985],"genre_scores_gemma":[0.9959685,0.00009126367,0.00016523899,0.000060973038,0.00004066408,0.0000040688583,0.0000927515,0.000006579635,0.0035699122],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99926645,0.00001140912,0.00016904355,0.0002184434,0.00017910184,0.00015555705],"domain_scores_gemma":[0.9996601,0.000004665188,0.00012625165,0.00012973523,0.000014782063,0.00006448324],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000054677374,0.00010156771,0.00009016391,0.000006655609,0.000042903794,0.0000181746,0.00018418627,0.00012741778,0.003412383],"category_scores_gemma":[0.00004681966,0.000088862995,0.000032463013,0.00011560516,0.00008524586,0.00006508568,0.00003492281,0.000069626876,0.00012280297],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013453841,0.000102986734,0.0019603092,0.00004925282,0.0000026290709,2.3062327e-7,0.00019189187,0.0000026389052,0.9808246,2.2049215e-7,0.013376141,0.003475634],"study_design_scores_gemma":[0.00025018255,0.000013729088,0.00031476762,0.000011290897,0.000006140856,0.0000028094,0.00005950358,0.00033680463,0.99349654,0.0000070994056,0.00538957,0.00011155688],"about_ca_topic_score_codex":0.000008770709,"about_ca_topic_score_gemma":0.0000010798195,"teacher_disagreement_score":0.0126719335,"about_ca_system_score_codex":0.00006356904,"about_ca_system_score_gemma":0.0000040186887,"threshold_uncertainty_score":0.99749863},"labels":[],"label_agreement":null},{"id":"W2044262704","doi":"10.1016/j.bbrc.2012.02.029","title":"Metabolism of chlorobiphenyls by a variant biphenyl dioxygenase exhibiting enhanced activity toward dibenzofuran","year":2012,"lang":"en","type":"article","venue":"Biochemical and Biophysical Research Communications","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Dibenzofuran; Biphenyl; Dioxygenase; Chemistry; Polychlorinated biphenyl; Enzyme; Stereochemistry; Biochemistry; Metabolism; Mutagenesis; Mutation; Organic chemistry; Gene","score_opus":0.05779353323808231,"score_gpt":0.329317315529875,"score_spread":0.27152378229179264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044262704","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99551135,0.0004048291,0.00015366927,0.0016007245,0.000024060148,0.00026318777,0.00012400596,0.000025841106,0.0018923531],"genre_scores_gemma":[0.99759686,0.0005456004,0.0015564316,0.000064992615,0.00006112283,0.000023042405,0.000044334716,0.0000105691715,0.00009706205],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998206,0.0002691195,0.00024986803,0.00026517076,0.0004939985,0.0005157989],"domain_scores_gemma":[0.99844646,0.00036206841,0.00008792893,0.0006745935,0.000054247073,0.00037467625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00069064443,0.00014669387,0.00022264963,0.000036738562,0.00022974898,0.000031611235,0.0006346354,0.0001151157,0.00028930223],"category_scores_gemma":[0.00034985255,0.00011543898,0.0000794066,0.0005541816,0.0011743978,0.0002185254,0.0009736762,0.00037993587,0.000113700415],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003320114,0.00067022804,0.00014446217,0.000014020339,0.000012099671,1.02086474e-7,0.00026663434,4.2031544e-8,0.9906543,0.0003462835,0.0019649328,0.0058936775],"study_design_scores_gemma":[0.00024427308,0.000033730077,0.0068568094,0.000016216829,0.000010134733,0.0000010325834,0.00007229753,0.00012821287,0.98702073,0.00012727719,0.005335686,0.00015358701],"about_ca_topic_score_codex":0.00034231218,"about_ca_topic_score_gemma":0.0000070518545,"teacher_disagreement_score":0.0067123473,"about_ca_system_score_codex":0.000067829096,"about_ca_system_score_gemma":0.000018906178,"threshold_uncertainty_score":0.4707465},"labels":[],"label_agreement":null},{"id":"W2044327173","doi":"10.1080/10889860903127027","title":"Physical and Biological Treatment of Oil-Contaminated Soil in a Baffled Roller Bioreactor","year":2009,"lang":"en","type":"article","venue":"Bioremediation Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biodegradation; Diesel fuel; Bioreactor; Soil contamination; Chemistry; Soil water; Bioremediation; Pulp and paper industry; Contamination; Environmental chemistry; Environmental science; Soil science; Ecology; Biology","score_opus":0.01450795913314692,"score_gpt":0.2360435000546583,"score_spread":0.22153554092151137,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044327173","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987547,0.000047784553,0.0000076055685,0.0006526615,0.000094981544,0.0000741147,0.000008990183,0.000011729291,0.0003474713],"genre_scores_gemma":[0.99904406,0.0005088325,0.00016918355,0.00009926166,0.00010821633,0.0000011571461,0.000010877272,0.0000037269476,0.000054669807],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99902654,0.000081066755,0.0003174231,0.00017742277,0.00019980368,0.00019773167],"domain_scores_gemma":[0.9995429,0.000036454123,0.00019280867,0.00007541491,0.000018771427,0.00013366702],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001780653,0.00013561118,0.00022113309,0.00008264972,0.000044605305,0.000021665752,0.000078667406,0.00009120042,0.0003587298],"category_scores_gemma":[0.000064157575,0.000090939386,0.00005486356,0.00024259584,0.0000963139,0.00012552182,0.0000142819445,0.00007919243,0.000042163763],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012705522,0.00064759736,0.15378419,0.000001213418,0.000008234807,0.000010122167,0.0014356239,0.000015547861,0.74014974,0.0000073059846,0.00019215923,0.1036212],"study_design_scores_gemma":[0.002064281,0.000742085,0.9476423,0.000008927264,0.000009380598,0.000018002458,0.00006409851,0.0005006172,0.047993597,0.000056557776,0.00076140807,0.00013872854],"about_ca_topic_score_codex":0.000034027005,"about_ca_topic_score_gemma":0.00006292047,"teacher_disagreement_score":0.7938581,"about_ca_system_score_codex":0.00017052106,"about_ca_system_score_gemma":0.000019811,"threshold_uncertainty_score":0.39278397},"labels":[],"label_agreement":null},{"id":"W2044397973","doi":"10.1016/j.envpol.2004.06.009","title":"Environmental applications for biosurfactants","year":2004,"lang":"en","type":"review","venue":"Environmental Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1527,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Biodegradation; Surfactin; Lipopeptide; Bacillus subtilis; Environmental remediation; Chemistry; Bacteria; Environmental science; Biochemical engineering; Biology; Contamination; Organic chemistry; Ecology","score_opus":0.0172911591557224,"score_gpt":0.2594046860222592,"score_spread":0.24211352686653678,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044397973","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001162015,0.98788244,0.0008481693,0.000041613166,0.00035852127,0.0050604865,0.0049952287,0.0001172747,0.000580042],"genre_scores_gemma":[0.003917132,0.9910675,0.0010363569,0.00012168622,0.00018059899,0.00042297444,0.0020626064,0.00011019039,0.0010809147],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99713284,0.00008072251,0.0007744363,0.0009697488,0.00043678252,0.0006054843],"domain_scores_gemma":[0.9986498,0.000039616658,0.0005164151,0.0005394051,5.6932754e-7,0.00025419527],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00020617095,0.00068633264,0.0008388733,0.00009266681,0.00033475403,0.0000457667,0.000491107,0.0005365526,0.004670324],"category_scores_gemma":[0.0000071775935,0.0006240497,0.0006302113,0.00018101044,0.00042065704,0.00021327892,0.00028318327,0.0002756611,0.010112444],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009885417,0.00040263394,0.00004095716,0.0007344488,0.00006652195,0.0000021211933,0.000034647488,0.00001771336,0.0021899978,0.000020331738,0.0012120836,0.99526864],"study_design_scores_gemma":[0.00042996518,0.00007535209,0.00021666773,0.00033577252,0.0003114389,0.000027133236,0.000018101087,0.0000041608973,0.00016089558,0.000088238936,0.99763846,0.000693836],"about_ca_topic_score_codex":0.000012572354,"about_ca_topic_score_gemma":0.000005521303,"teacher_disagreement_score":0.99642634,"about_ca_system_score_codex":0.002599238,"about_ca_system_score_gemma":0.000040221392,"threshold_uncertainty_score":0.9996211},"labels":[],"label_agreement":null},{"id":"W2044657712","doi":"10.1007/s10532-004-2036-y","title":"Enhanced biodegradation of phenol by a microbial consortium in a solid?liquid two phase partitioning bioreactor","year":2005,"lang":"en","type":"article","venue":"Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":129,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Microbial consortium; Biodegradation; Bioreactor; Pseudomonas putida; Phenol; Chemistry; Population; Substrate (aquarium); Chromatography; Aqueous two-phase system; Microorganism; Aqueous solution; Organic chemistry; Bacteria; Biology; Enzyme","score_opus":0.01159109207505673,"score_gpt":0.268989754723926,"score_spread":0.2573986626488693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044657712","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963135,0.000034869998,0.0018395444,0.00051423773,0.000117597105,0.00035408486,0.00019774136,0.000045752367,0.00058267254],"genre_scores_gemma":[0.9974317,0.000042043917,0.0014941477,0.00021921778,0.000053520012,0.00001191737,0.0005975178,0.000012089962,0.00013787317],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984621,0.00007867932,0.0005756382,0.0003554607,0.00024935277,0.00027881662],"domain_scores_gemma":[0.99935895,0.000027199916,0.00032082113,0.0001853339,0.000025679748,0.000081984756],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00026325232,0.0001783174,0.00020025054,0.0000960408,0.0000649974,0.0000293378,0.00015073035,0.000101182195,0.0017313756],"category_scores_gemma":[0.000058871523,0.00017367722,0.000055950593,0.00041337422,0.0001501511,0.0004551357,0.00004453518,0.00009408043,0.00033760717],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015765858,0.0004101884,0.0010728363,0.0000049507807,0.0000053283834,3.0937917e-7,0.00029918054,0.000031005937,0.9828414,0.000023043925,0.002609004,0.012545149],"study_design_scores_gemma":[0.002258667,0.00013551596,0.0010121322,0.000023056584,0.000011419476,0.0000013462214,0.00005533477,0.0009840163,0.9899085,0.000008476174,0.005391032,0.00021049006],"about_ca_topic_score_codex":0.00045742063,"about_ca_topic_score_gemma":0.001052958,"teacher_disagreement_score":0.012334659,"about_ca_system_score_codex":0.00022790922,"about_ca_system_score_gemma":0.000028540457,"threshold_uncertainty_score":0.99918115},"labels":[],"label_agreement":null},{"id":"W2044694678","doi":"10.1128/aem.72.1.585-595.2006","title":"Genetic and Genomic Insights into the Role of Benzoate-Catabolic Pathway Redundancy in <i>Burkholderia xenovorans</i> LB400","year":2006,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":103,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Oak Ridge National Laboratory; National Institute of Environmental Health Sciences; National Institutes of Health; U.S. Department of Energy","keywords":"Mutant; Biology; Biochemistry; Metabolic pathway; Burkholderia; Catabolism; Genetics; Chemistry; Gene; Enzyme; Bacteria","score_opus":0.0017647115662481555,"score_gpt":0.13956724339587004,"score_spread":0.13780253182962188,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044694678","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99720776,0.0014551585,0.0000031191603,0.00005223709,0.00003527823,0.0002713814,0.00003161231,0.00000748099,0.0009359622],"genre_scores_gemma":[0.9988043,0.0006169155,0.00020952204,0.00021916835,0.00002439765,0.0000091981465,0.00006972396,0.000012621647,0.00003416938],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99902433,0.000041031646,0.00029799275,0.00036006214,0.00004298204,0.00023360607],"domain_scores_gemma":[0.99967366,0.00002154149,0.00009613928,0.00016505782,5.456233e-7,0.000043050826],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000075220334,0.00017786302,0.00019603188,0.000031547108,0.000094342846,0.000011807795,0.00014706339,0.00012484365,0.00023901611],"category_scores_gemma":[7.874739e-7,0.00013243989,0.000022935263,0.00007517511,0.0007155021,0.000034598314,0.00021964737,0.0001033493,0.00007194654],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001607179,0.000064248256,0.04910196,0.0000032995906,0.0000039907823,9.0646523e-7,0.00067173503,0.000017651184,0.94433695,0.00011299498,0.00003402596,0.0056361374],"study_design_scores_gemma":[0.0008485436,0.000052473086,0.45905045,0.00000471036,0.0000123104555,0.000022994238,0.00043679788,0.000026145846,0.4931308,0.0016360951,0.044505846,0.00027280676],"about_ca_topic_score_codex":0.00067587814,"about_ca_topic_score_gemma":0.00045980886,"teacher_disagreement_score":0.45120615,"about_ca_system_score_codex":0.000051497704,"about_ca_system_score_gemma":0.0000048383326,"threshold_uncertainty_score":0.5400742},"labels":[],"label_agreement":null},{"id":"W2044793731","doi":"10.1065/lca2004.09.180.12","title":"LCA of Ex-Situ Bioremediation of Diesel-Contaminated Soil (11 pp)","year":2004,"lang":"en","type":"article","venue":"The International Journal of Life Cycle Assessment","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Polytechnique Montréal","funders":"","keywords":"Environmental remediation; Bioremediation; Environmental science; Contamination; Diesel fuel; Soil contamination; Waste management; Ecotoxicity; Life-cycle assessment; Environmental engineering; Soil water; Engineering; Chemistry; Soil science; Toxicity","score_opus":0.010068960476504874,"score_gpt":0.2603567831062569,"score_spread":0.250287822629752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044793731","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943921,0.00003296546,0.00049292215,0.0032207407,0.0006010022,0.00008896918,0.00001799955,0.0000045698043,0.0011487623],"genre_scores_gemma":[0.99859667,0.00017204651,0.0007799268,0.00029346315,0.00011340157,6.2216105e-7,0.000006629903,0.0000065694485,0.000030662773],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99809784,0.000056922745,0.0006887291,0.000094270115,0.000948941,0.00011327827],"domain_scores_gemma":[0.9985935,0.00007267791,0.00097615184,0.00011895165,0.00016489874,0.00007383015],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006558657,0.00009910027,0.00018828019,0.00006232087,0.000029586095,0.000018774934,0.0005916835,0.000045222085,0.00053625496],"category_scores_gemma":[0.00010490849,0.000066564215,0.00011415546,0.00013378481,0.00014771063,0.00021452384,0.00013141778,0.00011662095,0.000022923574],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014183373,0.0005109088,0.06911916,0.000008467348,0.00017823897,0.000010184458,0.0006680676,0.007039516,0.9166465,0.00048693165,0.0011308872,0.0040593063],"study_design_scores_gemma":[0.002503446,0.00027098015,0.72648984,0.00009323731,0.000051531515,0.000026986712,0.00055276783,0.00053425523,0.2671713,0.0008934812,0.0012578713,0.0001543269],"about_ca_topic_score_codex":0.00026332206,"about_ca_topic_score_gemma":0.00023908861,"teacher_disagreement_score":0.6573707,"about_ca_system_score_codex":0.0002864296,"about_ca_system_score_gemma":0.00012345634,"threshold_uncertainty_score":0.5871616},"labels":[],"label_agreement":null},{"id":"W2045113453","doi":"10.1017/s0032247402002863","title":"Effect of nutrient enrichments on the bacterial assemblage of Antarctic soils contaminated by diesel or crude oil","year":2003,"lang":"en","type":"article","venue":"Polar Record","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Rimouski","funders":"Natural Sciences and Engineering Research Council of Canada; Services Fédéraux des Affaires Scientifiques, Techniques et Culturelles; Institut Polaire Français Paul Emile Victor","keywords":"Bioremediation; Diesel fuel; Fertilizer; Contamination; Environmental science; Environmental remediation; Soil water; Nutrient; Hydrocarbon; Environmental chemistry; Agronomy; Chemistry; Biology; Ecology; Soil science","score_opus":0.007486973123390741,"score_gpt":0.22679548774859515,"score_spread":0.2193085146252044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045113453","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99737096,0.000011987312,0.000004935922,0.00006779438,0.00031649668,0.00018384299,0.000071516246,0.000008970167,0.0019635037],"genre_scores_gemma":[0.99901474,0.00010279187,0.000027578091,0.000104977815,0.000010174479,0.000004396032,0.0000144091755,0.000008416043,0.0007125458],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99878025,0.00034839558,0.00025961694,0.00017792506,0.00023934596,0.00019447206],"domain_scores_gemma":[0.9993085,0.0002412112,0.00018955443,0.00019384602,0.0000086730115,0.000058180445],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00053832383,0.00013273342,0.0002022288,0.000019711211,0.000053965054,0.00001128504,0.00017495244,0.00006304844,0.003802884],"category_scores_gemma":[0.000278115,0.00007486585,0.000059510774,0.00017588817,0.00010163704,0.000057118308,0.00004329435,0.00008264595,0.00015413914],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031145525,0.00015332845,0.019547997,0.00002355301,0.0000176971,0.0000012618382,0.00011478643,1.670048e-7,0.9711341,0.000009782257,0.0037296582,0.004956181],"study_design_scores_gemma":[0.00081573916,0.0008510583,0.005322183,0.000027596663,0.00001904497,0.0000012329047,0.000022221906,0.000005646239,0.9722711,0.0000046719656,0.020559877,0.00009963617],"about_ca_topic_score_codex":0.00037550888,"about_ca_topic_score_gemma":0.0000900258,"teacher_disagreement_score":0.016830219,"about_ca_system_score_codex":0.000084700296,"about_ca_system_score_gemma":0.0000098267465,"threshold_uncertainty_score":0.9971078},"labels":[],"label_agreement":null},{"id":"W2045152002","doi":"10.1007/s00253-002-0951-6","title":"Aerobic degradation of 2,4,6-trichlorophenol by a microbial consortium - selection and characterization of microbial consortium","year":2002,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Polytechnique Montréal","funders":"U.S. Environmental Protection Agency","keywords":"Microbial consortium; Chemistry; Mineralization (soil science); Biodegradation; Food science; Degradation (telecommunications); Microbiology; Anaerobic exercise; Bacteria; Biology; Nitrogen; Microorganism; Organic chemistry","score_opus":0.005639627539301184,"score_gpt":0.17308106564660938,"score_spread":0.1674414381073082,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045152002","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99828476,0.00008816531,0.00027524427,0.00054579065,0.000095414245,0.0003945472,0.00015544238,0.000053081545,0.00010754897],"genre_scores_gemma":[0.9982225,0.00054520724,0.0006233018,0.00022976118,0.000011962772,0.000005562792,0.00018195153,0.000012044615,0.00016771734],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99868387,0.00005163912,0.00049122394,0.00045477782,0.00003980783,0.00027869],"domain_scores_gemma":[0.999354,0.000032212614,0.00040460465,0.00014506679,0.000019966272,0.000044116605],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013704578,0.00021283221,0.00035875503,0.00012852356,0.0000975471,0.00000757318,0.00014075775,0.0006636913,0.00067540957],"category_scores_gemma":[0.000017196475,0.00019980123,0.0000327621,0.0003407958,0.0010865116,0.000064093656,0.00014606313,0.00019219088,0.000043559292],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007551144,0.000121663164,0.002185587,0.00002074905,0.000025656065,3.4851377e-7,0.00006849627,3.3656593e-7,0.9914261,0.00019601104,0.0012762159,0.004603332],"study_design_scores_gemma":[0.0008510276,0.00015198486,0.0013980927,0.0000069186885,0.000034991735,0.00007669208,0.000024810439,0.000021937258,0.9898903,0.000015519998,0.0073308395,0.0001969332],"about_ca_topic_score_codex":0.000045124172,"about_ca_topic_score_gemma":0.000056732406,"teacher_disagreement_score":0.0060546235,"about_ca_system_score_codex":0.00003581664,"about_ca_system_score_gemma":0.000007650527,"threshold_uncertainty_score":0.81476575},"labels":[],"label_agreement":null},{"id":"W2045526667","doi":"10.1016/j.jconhyd.2010.09.009","title":"Assessing chlorinated ethene degradation in a large scale contaminant plume by dual carbon–chlorine isotope analysis and quantitative PCR","year":2010,"lang":"en","type":"article","venue":"Journal of Contaminant Hydrology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":80,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Environmental chemistry; Isotope analysis; Plume; Chlorine; Environmental science; Degradation (telecommunications); Isotopes of carbon; Chemistry; Geology; Total organic carbon; Oceanography","score_opus":0.008976153283837768,"score_gpt":0.25691198184588127,"score_spread":0.2479358285620435,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045526667","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980225,0.00006897166,0.0004459679,0.0007652153,0.00031435728,0.00013578875,0.000015743944,0.0000066987254,0.00022478952],"genre_scores_gemma":[0.99887735,0.000109815504,0.00063205755,0.00017282717,0.000031041385,0.0000018675761,0.0000140601605,0.000009881413,0.0001510862],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982604,0.00017523007,0.00068522367,0.00026282255,0.00026326132,0.00035309655],"domain_scores_gemma":[0.998895,0.00012786814,0.0006283212,0.00013226813,0.00005224969,0.00016432276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013090583,0.00018309422,0.0005358643,0.00026637584,0.00007424481,0.000046918623,0.00015752697,0.00019217188,0.000400907],"category_scores_gemma":[0.00018765822,0.00014447742,0.00008777141,0.0005732126,0.00023905681,0.00041276362,0.000088650806,0.00048340549,0.000009235966],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012504205,0.00014933884,0.36759132,0.000003150464,0.00006182423,0.00006083699,0.00054526725,0.000011942787,0.6303225,0.00002493747,0.000034776323,0.0010690549],"study_design_scores_gemma":[0.0028627228,0.0006069901,0.9219797,0.000015100296,0.00027693406,0.00015983128,0.00048073917,0.011135831,0.059209198,0.000046377525,0.002939215,0.0002873101],"about_ca_topic_score_codex":0.00057816645,"about_ca_topic_score_gemma":0.011321614,"teacher_disagreement_score":0.5711133,"about_ca_system_score_codex":0.000091540576,"about_ca_system_score_gemma":0.000039369137,"threshold_uncertainty_score":0.63177264},"labels":[],"label_agreement":null},{"id":"W2045770735","doi":"10.1002/ep.670210210","title":"Evaluation of PCBs biodegradability in sludges by various microbial cultures","year":2002,"lang":"en","type":"article","venue":"Environmental Progress","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Conestoga College; Western University","funders":"","keywords":"Biodegradation; Anaerobic exercise; Chemistry; Environmental chemistry; Wastewater; Pulp and paper industry; Activated sludge; Human decontamination; Food science; Waste management; Environmental engineering; Environmental science; Biology; Organic chemistry","score_opus":0.014759582760236851,"score_gpt":0.23320256130154388,"score_spread":0.21844297854130704,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045770735","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969889,0.00069961685,0.0000022599863,0.00028132898,0.000085810076,0.0004952426,0.00009988124,0.000015364196,0.0013315802],"genre_scores_gemma":[0.99932855,0.00007738698,0.0001937415,0.00007005518,0.000012402072,0.000013151694,0.000040766798,0.0000092738155,0.00025464862],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99820304,0.00019572623,0.00031098485,0.00035118836,0.0007046167,0.00023442793],"domain_scores_gemma":[0.99958503,0.000013154997,0.00012791467,0.000203693,0.000003131039,0.00006709493],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006368286,0.00015763327,0.00014989918,0.000024708455,0.000048870927,0.000014488796,0.00019478852,0.000104312945,0.013835442],"category_scores_gemma":[0.000021990498,0.00013615207,0.000052371,0.00012611445,0.00046261935,0.00015028195,0.00011138816,0.00010416648,0.00040936616],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001292338,0.0011606003,0.37923658,0.0000062408903,0.000012241853,0.0000012351436,0.00070427364,0.000051550927,0.5466886,9.4099477e-7,0.014234679,0.05789011],"study_design_scores_gemma":[0.0026389014,0.00020791237,0.58594376,0.00002106926,0.00007771938,0.000009034658,0.0002061422,0.0034749901,0.39021924,0.00010146548,0.01651068,0.00058908336],"about_ca_topic_score_codex":0.000079379475,"about_ca_topic_score_gemma":0.00008448822,"teacher_disagreement_score":0.20670716,"about_ca_system_score_codex":0.0003771961,"about_ca_system_score_gemma":0.0000030010476,"threshold_uncertainty_score":0.98706603},"labels":[],"label_agreement":null},{"id":"W2046449786","doi":"10.1016/j.ibiod.2014.08.013","title":"Microbially enhanced oil recovery from miniature model columns through stimulation of indigenous microflora with nitrate","year":2014,"lang":"en","type":"article","venue":"International Biodeterioration & Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Canada; Baker Hughes; ConocoPhillips","keywords":"Nitrate; Chemistry; Nitrogen; Carbon dioxide; Environmental chemistry; Biomass (ecology); Carbon fibers; Organic chemistry; Ecology; Materials science; Biology","score_opus":0.008986247499610672,"score_gpt":0.21255037226369947,"score_spread":0.2035641247640888,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046449786","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9398872,0.0000112621665,0.056738835,0.00042355404,0.0003896757,0.00021195631,0.00052065053,0.00006152124,0.0017553146],"genre_scores_gemma":[0.96564394,0.00006727745,0.030740682,0.00059853366,0.000094584655,0.000011367508,0.0022675775,0.00002195319,0.000554066],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980819,0.00008983316,0.0005922711,0.00050862395,0.0005121476,0.0002151874],"domain_scores_gemma":[0.99883986,0.00005132148,0.0006162691,0.00027346142,0.00015489287,0.000064201995],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002031176,0.00025968085,0.00023514435,0.00009017227,0.000121610414,0.00012489269,0.0003286169,0.00020725385,0.0006747455],"category_scores_gemma":[0.000054412263,0.00023472637,0.00007927205,0.00028620957,0.00014429013,0.00089601555,0.00006917914,0.0001276067,0.000220479],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003376767,0.00011516337,0.0028635794,0.000006454123,0.000034748606,3.5161327e-7,0.00085915404,0.0043168613,0.97767067,0.000019263973,0.0004983676,0.013277719],"study_design_scores_gemma":[0.0016391923,0.00029366737,0.01327525,0.00007665967,0.00005438525,0.0000033356507,0.000072827715,0.02315584,0.95703256,0.000568353,0.0032879964,0.0005399418],"about_ca_topic_score_codex":0.0005645097,"about_ca_topic_score_gemma":0.0012139154,"teacher_disagreement_score":0.025998153,"about_ca_system_score_codex":0.00022831277,"about_ca_system_score_gemma":0.00006128376,"threshold_uncertainty_score":0.95718634},"labels":[],"label_agreement":null},{"id":"W2046839591","doi":"10.1002/cjce.5450800209","title":"Improved modelling of the unsteady‐state behaviour of an immobilized‐cell, fluidized‐bed bioreactor for phenol biodegradation","year":2002,"lang":"en","type":"article","venue":"The Canadian Journal of Chemical Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bioreactor; Pseudomonas putida; Phenol; Biodegradation; Fluidized bed; Biofilm; Substrate (aquarium); Chemistry; Chemical engineering; Biomass (ecology); Chromatography; Kinetics; Pulp and paper industry; Materials science; Environmental science; Bacteria; Biology; Biochemistry; Ecology; Organic chemistry","score_opus":0.015364719001259096,"score_gpt":0.17559646980003518,"score_spread":0.16023175079877608,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046839591","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991024,0.000060906135,0.00034285217,0.0001457394,0.00012163152,0.00015943444,0.000047544414,0.0000031745676,0.000016324524],"genre_scores_gemma":[0.99859905,0.0000062176973,0.0013160282,0.000023800994,0.000027556292,9.671271e-7,0.000002251151,0.0000116371775,0.000012478541],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992141,0.000013990742,0.00036595378,0.000080001715,0.00014244083,0.0001834968],"domain_scores_gemma":[0.9993745,0.000036482677,0.00023010248,0.00014859185,0.000037626403,0.00017267608],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022580399,0.00009699681,0.00015103888,0.000036984813,0.000037877962,0.000015757483,0.00033511638,0.00005651814,0.00013841392],"category_scores_gemma":[0.000048715054,0.00006133296,0.00010430283,0.00014655781,0.00009323753,0.00010289745,0.000014591688,0.0001311332,0.0000011748328],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009446838,0.00001691225,0.00013365131,0.00000938104,0.0000065727227,3.061166e-7,0.00029333733,0.004522896,0.9944639,0.0000036282777,0.000060145965,0.0004798087],"study_design_scores_gemma":[0.00035954383,0.000034203174,0.00002981219,0.0000192671,0.00002239425,0.0000055413366,0.00001659988,0.06459025,0.9347532,0.0000156141,0.000081223196,0.00007236329],"about_ca_topic_score_codex":0.0010854307,"about_ca_topic_score_gemma":0.0001882448,"teacher_disagreement_score":0.060067356,"about_ca_system_score_codex":0.00013400809,"about_ca_system_score_gemma":0.0000402651,"threshold_uncertainty_score":0.25010854},"labels":[],"label_agreement":null},{"id":"W2047149747","doi":"10.1080/16226510490496591","title":"Plant-Assisted Degradation of Phenanthrene as Assessed by Solid-Phase Microextraction (SPME)","year":2004,"lang":"en","type":"article","venue":"International Journal of Phytoremediation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Phenanthrene; Solid-phase microextraction; Chemistry; Chromatography; Gas chromatography; Environmental chemistry; Gas chromatography–mass spectrometry; Polycyclic aromatic hydrocarbon; Mass spectrometry","score_opus":0.011593327593535437,"score_gpt":0.3093265361948275,"score_spread":0.29773320860129204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047149747","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9906277,0.000040351548,0.0060883285,0.00091768324,0.0015993024,0.00015137966,0.0001605552,0.000010582723,0.00040413282],"genre_scores_gemma":[0.99771655,0.00015595055,0.0012614281,0.00027056882,0.0002182183,0.0000011895899,0.00030955448,0.000011067534,0.000055456167],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99809706,0.000050822437,0.00074087025,0.00015919538,0.00081778836,0.00013426969],"domain_scores_gemma":[0.9982042,0.00004348973,0.0013402553,0.00009282801,0.00022008666,0.0000991742],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041751703,0.00013186377,0.00019379215,0.00012293091,0.000044979693,0.00006792937,0.0004978004,0.00009378866,0.000861973],"category_scores_gemma":[0.00018892143,0.00011682244,0.000094954456,0.00017991428,0.000074163356,0.0009067555,0.00006455676,0.00013431552,0.000064835745],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003221934,0.00080300245,0.0020555926,0.000003161562,0.000058068003,0.000007923102,0.00024165904,0.00019833229,0.9832512,0.000035889294,0.003262122,0.009760838],"study_design_scores_gemma":[0.004454938,0.0003278085,0.012666838,0.00006376273,0.00003865941,0.00006014257,0.00015676512,0.000073781644,0.978522,0.0004481168,0.0030327993,0.00015437018],"about_ca_topic_score_codex":0.00021910763,"about_ca_topic_score_gemma":0.00008554689,"teacher_disagreement_score":0.010611246,"about_ca_system_score_codex":0.00046903366,"about_ca_system_score_gemma":0.00010493963,"threshold_uncertainty_score":0.9438},"labels":[],"label_agreement":null},{"id":"W2047210337","doi":"10.1016/j.chemosphere.2014.06.004","title":"Identification of oxidative coupling products of xylenols arising from laboratory-scale phytoremediation","year":2014,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Helmholtz-Zentrum für Umweltforschung","keywords":"Biphenyl; Chemistry; Oxidative coupling of methane; Derivatization; Radical; Polychlorinated biphenyl; Environmental chemistry; Rhizosphere; Organic chemistry; High-performance liquid chromatography; Methane","score_opus":0.005313248736576148,"score_gpt":0.19916545986207318,"score_spread":0.19385221112549703,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047210337","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983694,0.000023357972,0.00074085605,0.000092325354,0.0001435132,0.00014297213,0.000042895776,0.000016881886,0.00042779263],"genre_scores_gemma":[0.9976013,0.0000112838925,0.0021786392,0.000029553672,0.000057704336,0.0000015794832,0.000040254672,0.000007967023,0.000071718576],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99910074,0.00002070895,0.0003271296,0.0002272861,0.00022613887,0.00009796671],"domain_scores_gemma":[0.99925035,0.000032701428,0.00039040772,0.00022715145,0.000065543965,0.000033871995],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026245782,0.000083780644,0.00014132468,0.0000058051796,0.000030484636,0.000009626737,0.00013317236,0.000068803645,0.0006176455],"category_scores_gemma":[0.00017355214,0.000079224235,0.00002306188,0.00025788142,0.00011006281,0.0001512027,0.00004046548,0.000052861134,0.000113107904],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008376926,0.000048293598,0.04146713,0.000015749292,0.0000046881437,3.0832073e-8,0.0004066004,0.00013534936,0.95579517,0.0000044193084,0.00063366926,0.0014805142],"study_design_scores_gemma":[0.00017232832,0.000013345468,0.06831838,0.000015740414,0.000009999411,3.4255297e-8,0.0000995632,0.0011910147,0.9295379,0.00007292978,0.00049188186,0.00007686058],"about_ca_topic_score_codex":0.000062345054,"about_ca_topic_score_gemma":0.00003431989,"teacher_disagreement_score":0.026851252,"about_ca_system_score_codex":0.000051826057,"about_ca_system_score_gemma":0.000013814523,"threshold_uncertainty_score":0.6762785},"labels":[],"label_agreement":null},{"id":"W2047999654","doi":"10.1111/j.1751-7915.2009.00096.x","title":"The thermodynamic landscape of methanogenic PAH degradation","year":2009,"lang":"en","type":"article","venue":"Microbial Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Energy","funders":"Engineering and Physical Sciences Research Council; Natural Environment Research Council; Sight Research UK","keywords":"Chemistry; Methanogenesis; Pyrene; Exergonic reaction; Chrysene; Naphthalene; Environmental chemistry; Phenanthrene; Anthracene; Methane; Biostimulation; Degradation (telecommunications); Hydrocarbon; Organic chemistry; Bioremediation; Catalysis; Contamination","score_opus":0.005057664617859744,"score_gpt":0.20071064145395573,"score_spread":0.19565297683609598,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047999654","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99253696,0.00009229565,0.00024112,0.0055648154,0.00013768233,0.00017462355,0.000016194852,0.000073228955,0.0011630491],"genre_scores_gemma":[0.998696,0.00019273697,0.0005052184,0.00027977748,0.00001288064,8.1435746e-7,0.000014668461,0.000005203904,0.00029268608],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991846,0.0000444881,0.00023543296,0.00020726564,0.000093037845,0.00023517164],"domain_scores_gemma":[0.99952245,0.000025751777,0.00013367017,0.00028498814,0.000008072207,0.000025095997],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021388453,0.00010912744,0.0001227214,0.000042646727,0.00011295058,0.000012144761,0.0003845895,0.00023147,0.00048449932],"category_scores_gemma":[0.00004054525,0.000072979805,0.00006042745,0.00033444096,0.00025990198,0.000043519547,0.000081668426,0.00013231245,0.00029191724],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020664264,0.00003066569,0.0003643568,6.3130744e-7,0.000005373408,5.9703046e-7,0.000021382286,0.0000029353992,0.95239455,0.00033692864,0.0022262519,0.044595692],"study_design_scores_gemma":[0.00027929625,0.00011971126,0.009055338,0.0000032173639,0.00001019453,0.0000123523205,0.000029983834,0.00011334796,0.9668274,0.00044939943,0.022978246,0.00012152398],"about_ca_topic_score_codex":0.000035698587,"about_ca_topic_score_gemma":0.00021169595,"teacher_disagreement_score":0.044474166,"about_ca_system_score_codex":0.000045736077,"about_ca_system_score_gemma":0.000010035833,"threshold_uncertainty_score":0.5304928},"labels":[],"label_agreement":null},{"id":"W2048190094","doi":"10.1139/w00-013","title":"Community dynamics of a mixed-bacterial culture growing on petroleum hydrocarbons in batch culture","year":2000,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada; University of Guelph","keywords":"Stenotrophomonas; Acinetobacter calcoaceticus; Acinetobacter; Alcaligenes; Microbiology; Pseudomonas; Biodegradation; Food science; Bacteria; Stenotrophomonas maltophilia; Microbial consortium; Biology; Hydrocarbon; Chemistry; Microorganism; Organic chemistry; Pseudomonas aeruginosa; Ecology","score_opus":0.006055622139536638,"score_gpt":0.18945057405159196,"score_spread":0.18339495191205532,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048190094","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99667853,0.00003676711,0.0000015016345,0.00060891337,0.00031071497,0.000055991048,0.00015595272,0.0000022972013,0.0021493456],"genre_scores_gemma":[0.9989233,0.00003513625,0.00010641773,0.00043366558,0.000044387525,2.2655036e-7,0.00006989316,0.0000073377155,0.0003796189],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99889475,0.00027963464,0.0003873906,0.00010324213,0.00004587316,0.000289121],"domain_scores_gemma":[0.9994431,0.00001961359,0.00017340462,0.00013791668,0.00000917689,0.0002168032],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00032908644,0.0001333927,0.0002606795,0.00009248052,0.000090909176,0.000011947406,0.00038515165,0.00021532021,0.0017771379],"category_scores_gemma":[0.000038213057,0.00010819631,0.000089533874,0.0001648626,0.00023900597,0.000090448324,0.000017165985,0.00054477254,0.00006590569],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010615245,0.00007060856,0.020946795,0.0000045711204,0.000021300153,0.000044806307,0.0016348185,0.00014803029,0.96467346,0.000016952803,0.010303411,0.002029067],"study_design_scores_gemma":[0.00947391,0.005195297,0.15699445,0.00057874364,0.00014370063,0.0026067295,0.004360783,0.00019137863,0.216569,0.00083773176,0.6011621,0.0018862134],"about_ca_topic_score_codex":0.0068560042,"about_ca_topic_score_gemma":0.20308565,"teacher_disagreement_score":0.7481045,"about_ca_system_score_codex":0.00042484314,"about_ca_system_score_gemma":0.00012217385,"threshold_uncertainty_score":0.9997574},"labels":[],"label_agreement":null},{"id":"W2048249408","doi":"10.1080/10889860590929619","title":"Evaluating Biodegradation as a Primary and Secondary Treatment for Removing RDX (Hexahydro-1,3,5-trinitro-1,3,5-triazine) from a Perched Aquifer","year":2005,"lang":"en","type":"article","venue":"Bioremediation Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Biodegradation; Microcosm; Permanganate; Environmental chemistry; Mineralization (soil science); Potassium permanganate; Environmental remediation; Chemistry; Biostimulation; Aquifer; Bioremediation; Groundwater; Contamination; Nitrogen; Ecology; Geology; Organic chemistry","score_opus":0.04755735690570457,"score_gpt":0.3109310699799493,"score_spread":0.26337371307424473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048249408","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947709,0.00026505667,0.0009499897,0.002405818,0.0003667717,0.0005588769,0.00009637654,0.000048875532,0.00053735013],"genre_scores_gemma":[0.9497568,0.00056547474,0.04599157,0.0013631155,0.001457644,0.000022735581,0.0003367648,0.000035083438,0.0004707819],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99792415,0.00015898998,0.0006194076,0.00042286434,0.00052078837,0.0003537865],"domain_scores_gemma":[0.9988306,0.00022238037,0.00042626058,0.00017382833,0.000057065983,0.00028984484],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000916529,0.00026086363,0.000261,0.00011768641,0.00036598713,0.00017633803,0.00015633687,0.00016166596,0.0023305414],"category_scores_gemma":[0.0003619305,0.0002153465,0.00012408945,0.00017929614,0.00008858,0.0005986673,0.00006518635,0.00018697893,0.00028372204],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019174839,0.00010516323,0.0065491972,0.0000047034837,0.000035110825,0.0000020754082,0.0008603375,0.000046524638,0.7524748,0.0000061691935,0.0014704617,0.23825373],"study_design_scores_gemma":[0.029670076,0.002944843,0.41099977,0.00016464721,0.0006097964,0.00032138094,0.000991927,0.03917242,0.3319222,0.0017277802,0.17908269,0.0023924764],"about_ca_topic_score_codex":0.00006435751,"about_ca_topic_score_gemma":0.00009286306,"teacher_disagreement_score":0.42055258,"about_ca_system_score_codex":0.00081877556,"about_ca_system_score_gemma":0.00015118823,"threshold_uncertainty_score":0.99858147},"labels":[],"label_agreement":null},{"id":"W2048512839","doi":"10.1080/10916466.2011.559507","title":"The Surveying of Soil and Groundwater Pollution in a Petroleum Refinery and the Potential of Bioremediation for Oil Decontamination","year":2013,"lang":"en","type":"article","venue":"Petroleum Science and Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Windsor","keywords":"Environmental science; Groundwater; Environmental remediation; Contamination; Human decontamination; Bioremediation; Pollution; Soil contamination; Groundwater pollution; Petroleum; Oil refinery; Soil water; Environmental engineering; Waste management; Environmental chemistry; Aquifer; Soil science; Geology; Chemistry; Ecology; Geotechnical engineering","score_opus":0.004169805130191215,"score_gpt":0.1933079478467884,"score_spread":0.18913814271659718,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048512839","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940854,0.0001066451,0.00009530005,0.005471401,0.000055746055,0.000095493684,0.0000028188101,0.00000685209,0.00008039415],"genre_scores_gemma":[0.99942446,0.0003483372,0.00010606555,0.000043907738,0.000005545686,0.000016362736,0.0000010792331,0.0000021525177,0.00005209948],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99923706,0.000032025273,0.0002104493,0.00018136538,0.00016826183,0.00017085936],"domain_scores_gemma":[0.9996267,0.000067998655,0.00014049462,0.00010078454,0.000043201835,0.000020812538],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014124335,0.00006229104,0.00010682264,0.00013565953,0.00018129234,0.00003273438,0.00014312145,0.000062052735,0.0000069546627],"category_scores_gemma":[0.0002503811,0.000035138615,0.000010796658,0.0003222707,0.0022192667,0.00021714596,0.0001270655,0.000055577475,0.0000012758023],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049395236,0.000028087938,0.08736783,0.000013192572,0.0000033365707,1.1063266e-7,0.00014839205,0.000018449162,0.8171849,0.0013268442,0.000038744194,0.09382068],"study_design_scores_gemma":[0.0023275162,0.0002121771,0.909808,0.000016963468,0.000014457673,0.000013456074,0.0009657836,0.034100983,0.04883289,0.0032452007,0.00032192154,0.00014067386],"about_ca_topic_score_codex":0.0005970866,"about_ca_topic_score_gemma":0.0012610218,"teacher_disagreement_score":0.82244015,"about_ca_system_score_codex":0.000034646022,"about_ca_system_score_gemma":0.000017108856,"threshold_uncertainty_score":0.81769806},"labels":[],"label_agreement":null},{"id":"W2048619214","doi":"10.1021/es9029717","title":"Determination of Microbial Carbon Sources and Cycling during Remediation of Petroleum Hydrocarbon Impacted Soil Using Natural Abundance <sup>14</sup>C Analysis of PLFA","year":2010,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University; University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Environmental remediation; Environmental chemistry; Microbial population biology; Biodegradation; Mineralization (soil science); Soil contamination; Environmental science; Soil water; Soil carbon; Soil organic matter; Petroleum; Soil test; Chemistry; Contamination; Soil science; Ecology; Geology; Biology; Bacteria","score_opus":0.003081998916468185,"score_gpt":0.1986514097366047,"score_spread":0.1955694108201365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048619214","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999598,0.000029063593,0.000028370487,0.000036132522,0.00007665762,0.0001328905,0.000021948894,0.000020870824,0.00005604121],"genre_scores_gemma":[0.99859995,0.00003566735,0.0013190688,0.000006395782,0.0000108609,0.0000011614273,0.0000078189105,0.0000079370675,0.000011133345],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983076,0.000025719883,0.0004802148,0.00043064286,0.0004454723,0.0003103773],"domain_scores_gemma":[0.99906904,0.000024631998,0.000555376,0.0002761575,0.000008896798,0.000065907574],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038212075,0.00016410433,0.00031765748,0.00070274173,0.0001270416,0.000010596115,0.00036702678,0.0001793879,0.000092506714],"category_scores_gemma":[0.0000930541,0.0001565871,0.00006948791,0.0014769604,0.0025910798,0.00025073372,0.00030418835,0.0002181085,0.0000014034606],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013728687,0.000045689998,0.2720964,0.0000049071964,0.000010609275,4.9589994e-7,0.00029331786,0.001278644,0.72518885,0.0000015833585,7.510739e-8,0.0010656656],"study_design_scores_gemma":[0.0002353152,0.000045055822,0.23443574,0.000008137871,0.00007235723,0.0000067002898,0.0001786671,0.059403874,0.70548725,0.00001235186,0.0000030288747,0.00011153524],"about_ca_topic_score_codex":0.00025178675,"about_ca_topic_score_gemma":0.00024114712,"teacher_disagreement_score":0.05812523,"about_ca_system_score_codex":0.00019457219,"about_ca_system_score_gemma":0.00001888413,"threshold_uncertainty_score":0.95469415},"labels":[],"label_agreement":null},{"id":"W2048682422","doi":"10.1139/w05-013","title":"Biphenyl uptake by psychrotolerant<i>Pseudomonas</i>sp. strain Cam-1 and mesophilic<i>Burkholderia</i>sp. strain LB400","year":2005,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biphenyl; Mesophile; Pseudomonas; Strain (injury); Burkholderia; Chemistry; Bacteria; Biology; Biochemistry; Stereochemistry; Organic chemistry","score_opus":0.00878324614444521,"score_gpt":0.20400265473799856,"score_spread":0.19521940859355336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048682422","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98669624,0.0013378916,0.00002945771,0.008206974,0.0005018789,0.00027866368,0.0017115637,0.000011842778,0.0012255101],"genre_scores_gemma":[0.99327224,0.00020131141,0.0011005239,0.004618435,0.00026557714,0.0000014614072,0.000077098106,0.000026216216,0.00043714602],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980471,0.00014340525,0.00068465335,0.00035328843,0.000095398485,0.0006761133],"domain_scores_gemma":[0.99854046,0.000035300865,0.00034412713,0.00020247509,0.000035326153,0.00084231],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00057195517,0.0002903828,0.00039211803,0.00013257939,0.00018547046,0.000059190716,0.00044885237,0.0002837534,0.007661777],"category_scores_gemma":[0.00004411898,0.0002562092,0.000115558294,0.00019402296,0.0006285597,0.00019721706,0.000038316393,0.0003729732,0.00022633799],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017839158,0.000026382477,0.0031151313,0.0000039102433,0.000027671775,0.000033064538,0.0003380695,0.000014286625,0.8638498,0.000015411864,0.12214207,0.010416318],"study_design_scores_gemma":[0.0019561332,0.00031161768,0.00957668,0.00003676371,0.000040320065,0.0017774778,0.00025834242,0.000016139908,0.036843564,0.000111935165,0.94852835,0.0005426835],"about_ca_topic_score_codex":0.0013336294,"about_ca_topic_score_gemma":0.037007492,"teacher_disagreement_score":0.8270063,"about_ca_system_score_codex":0.00023500263,"about_ca_system_score_gemma":0.00025898602,"threshold_uncertainty_score":0.99998903},"labels":[],"label_agreement":null},{"id":"W2049130874","doi":"10.1139/w03-098","title":"Biodegradation of Maya crude oil fractions by bacterial strains and a defined mixed culture isolated from <i>Cyperus laxus</i> rhizosphere soil in a contaminated site","year":2003,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Consejo Nacional de Ciencia y Tecnología","keywords":"Biodegradation; Chemistry; Fraction (chemistry); Enrichment culture; Microbial biodegradation; Rhizosphere; Microorganism; Bacteria; Food science; Chromatography; Biology; Organic chemistry","score_opus":0.004780463178124382,"score_gpt":0.1743629174352448,"score_spread":0.1695824542571204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049130874","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99776995,0.00029603115,0.000018656065,0.00025313252,0.00030666564,0.000053254684,0.0010652947,0.0000028674083,0.000234173],"genre_scores_gemma":[0.9988867,0.00011902767,0.00034834316,0.00018971361,0.000015806521,4.2379787e-7,0.00022136774,0.00000774512,0.00021086793],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989719,0.00017282188,0.00041418368,0.00016470139,0.00003645566,0.00023997722],"domain_scores_gemma":[0.99934477,0.000028733783,0.00029515527,0.000080318874,0.000035661124,0.00021537434],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016244058,0.00013445925,0.00025375912,0.00006534078,0.000060537528,0.000019887275,0.000111871756,0.00023680288,0.0023570268],"category_scores_gemma":[0.000089282,0.00011733295,0.000044931097,0.00019592373,0.00019377688,0.000110677654,0.000009816363,0.0002029762,0.000028485912],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034459976,0.00002817497,0.019044053,0.0000024185076,0.000019235638,0.000011722772,0.0004519121,0.0000054865277,0.9714614,0.0000036107751,0.008332835,0.0006046661],"study_design_scores_gemma":[0.008059442,0.0007434792,0.09410035,0.00015659374,0.00012294255,0.00057941664,0.0012889559,0.000027172031,0.6758407,0.00007452658,0.21820027,0.00080619473],"about_ca_topic_score_codex":0.015378332,"about_ca_topic_score_gemma":0.26326036,"teacher_disagreement_score":0.29562077,"about_ca_system_score_codex":0.00017314794,"about_ca_system_score_gemma":0.00017044069,"threshold_uncertainty_score":0.99855494},"labels":[],"label_agreement":null},{"id":"W2050531327","doi":"10.1139/w01-125","title":"DNA-based and culture-based characterization of a hydrocarbon-degrading consortium enriched from Arctic soil","year":2001,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Royal Military College of Canada","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Phylotype; Biology; Library; 16S ribosomal RNA; Microbiology; Sphingomonas; Ribosomal DNA; Polymerase chain reaction; Genetics; Bacteria; Gene; Phylogenetics","score_opus":0.007623749788676199,"score_gpt":0.1819283773072951,"score_spread":0.17430462751861892,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050531327","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99864656,0.0000656211,0.00020326264,0.0006321591,0.00020744247,0.00007133237,0.0000799522,0.0000029291564,0.00009072666],"genre_scores_gemma":[0.9986601,0.000016760461,0.0002895871,0.00087131036,0.00003822832,3.3144056e-7,0.00007250037,0.000007157504,0.00004405424],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999167,0.0000764786,0.00036086174,0.00013921184,0.00004190452,0.00021452381],"domain_scores_gemma":[0.9992429,0.000031579475,0.00035015756,0.00008606648,0.000032462693,0.00025685024],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017224917,0.00011239674,0.0002178316,0.0001041739,0.000055282457,0.0000142790195,0.00014399817,0.00012632123,0.0010600038],"category_scores_gemma":[0.000058316746,0.000095825875,0.000055715576,0.0001497612,0.0002663984,0.0000587316,0.000008409433,0.000117441065,0.000018002054],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025211584,0.0000112923635,0.1985063,0.0000029347223,0.0000099308645,0.000014386139,0.0001467542,0.000016170488,0.80090314,0.0000012492659,0.00016130546,0.00020130812],"study_design_scores_gemma":[0.0026274517,0.00037190111,0.36864552,0.000096769625,0.00008792626,0.00018058185,0.0000838994,0.0003493669,0.60666096,0.000102113,0.020389156,0.00040436722],"about_ca_topic_score_codex":0.002242684,"about_ca_topic_score_gemma":0.021972213,"teacher_disagreement_score":0.19424222,"about_ca_system_score_codex":0.0001494881,"about_ca_system_score_gemma":0.00020727846,"threshold_uncertainty_score":0.99985313},"labels":[],"label_agreement":null},{"id":"W2050545144","doi":"10.1139/w05-025","title":"Microbial community structure and trichloroethylene degradation in groundwater","year":2005,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Youngstown State University","keywords":"Groundwater; Library; Trichloroethylene; Microbial population biology; Environmental chemistry; Chemistry; Terminal restriction fragment length polymorphism; Mineralization (soil science); Microbiology; 16S ribosomal RNA; Biology; Bacteria; Restriction fragment length polymorphism; Polymerase chain reaction; Biochemistry; Organic chemistry; Geology","score_opus":0.009986264789569365,"score_gpt":0.1981518280125618,"score_spread":0.1881655632229924,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050545144","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983922,0.000110811154,0.000009457825,0.0011115584,0.0001720714,0.000058093952,0.00003650617,0.0000015668772,0.000107717475],"genre_scores_gemma":[0.99820817,0.00001662986,0.0006766777,0.00092057674,0.000051215902,8.807147e-8,0.000019150475,0.0000050070726,0.00010250065],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992168,0.00017596608,0.00028222374,0.00008050665,0.000022915068,0.00022158497],"domain_scores_gemma":[0.9995812,0.0000260974,0.00012455837,0.000077126206,0.000015069613,0.00017594254],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003216268,0.000090565205,0.00014734126,0.00012855958,0.000090984686,0.000019840021,0.0001801619,0.00012537526,0.0016605041],"category_scores_gemma":[0.000038134425,0.000075408214,0.000025872892,0.000117151874,0.0001994716,0.0001341022,0.000024876083,0.00032854103,0.000037116966],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001463774,0.000013466595,0.058104593,0.0000017455759,0.0000046658283,0.000007912601,0.0005882717,0.000022819855,0.9323151,0.0000033517306,0.0034370595,0.0054863924],"study_design_scores_gemma":[0.0029861412,0.00039878575,0.45412323,0.00003856916,0.000028459002,0.002173373,0.00036081293,0.000015038229,0.26781148,0.00017470904,0.2713913,0.0004980817],"about_ca_topic_score_codex":0.008976295,"about_ca_topic_score_gemma":0.43726403,"teacher_disagreement_score":0.66450363,"about_ca_system_score_codex":0.00027748928,"about_ca_system_score_gemma":0.000080809274,"threshold_uncertainty_score":0.99925214},"labels":[],"label_agreement":null},{"id":"W2050847437","doi":"10.1139/w04-130","title":"Hydrocarbon biodegradation in oxygen-limited sequential batch reactors by consortium from weathered, oil-contaminated soil","year":2005,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Consejo Nacional de Ciencia y Tecnología","keywords":"Biodegradation; Contamination; Hydrocarbon; Environmental chemistry; Environmental science; Soil contamination; Oxygen; Bioremediation; Waste management; Pulp and paper industry; Chemistry; Soil water; Biology; Soil science; Ecology; Organic chemistry","score_opus":0.007885557758988762,"score_gpt":0.18971182253438018,"score_spread":0.18182626477539143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050847437","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968283,0.00028086896,0.000008725591,0.0015189194,0.0004081494,0.000054686836,0.00028243466,0.000006083984,0.0006117991],"genre_scores_gemma":[0.9981868,0.00008097076,0.00015098964,0.0008607567,0.00007879839,4.928065e-7,0.00026979315,0.000012394627,0.00035899537],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986214,0.00015940185,0.0005422382,0.0002287498,0.000059117618,0.00038907002],"domain_scores_gemma":[0.9991804,0.000035684734,0.0003141392,0.00012726705,0.000024260757,0.00031827565],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00027983927,0.00016618894,0.0002502626,0.0001579935,0.00005464197,0.000024597333,0.00028097912,0.00025005385,0.0032480184],"category_scores_gemma":[0.000057334815,0.00015219914,0.00006794412,0.00021559987,0.00021398196,0.00015057652,0.000019302493,0.0002653813,0.00020734382],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029114368,0.000026049187,0.024977366,8.341386e-7,0.000018444387,0.000033902077,0.00030159543,0.000027989356,0.95575625,8.0086676e-7,0.014040561,0.0047871033],"study_design_scores_gemma":[0.0031782144,0.00020441342,0.026189389,0.000060384114,0.0000517344,0.0003031652,0.0003209635,0.00017708539,0.61711234,0.000024125677,0.35176337,0.0006148075],"about_ca_topic_score_codex":0.03189189,"about_ca_topic_score_gemma":0.30629098,"teacher_disagreement_score":0.3386439,"about_ca_system_score_codex":0.0006812939,"about_ca_system_score_gemma":0.00020676616,"threshold_uncertainty_score":0.99766314},"labels":[],"label_agreement":null},{"id":"W2053170734","doi":"10.1139/s05-014","title":"Intrinsic bioremediation of diesel-contaminated cold groundwater in bedrock","year":2006,"lang":"en","type":"article","venue":"Journal of Environmental Engineering and Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Bioremediation; Microcosm; Biodegradation; Environmental chemistry; Biostimulation; Environmental science; Groundwater; BTEX; Chemistry; Nutrient; Contamination; Ecology; Geology; Ethylbenzene; Toluene; Biology","score_opus":0.0024604395218759466,"score_gpt":0.15809058198369594,"score_spread":0.15563014246182,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053170734","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995818,0.000056523062,0.000074533644,0.00003601174,0.00010940631,0.000050453535,0.0000021934404,0.0000029103187,0.00008615217],"genre_scores_gemma":[0.9993285,0.00006250503,0.0005307374,0.00001344561,0.000020533213,2.8876835e-7,5.9119725e-7,0.0000037369177,0.000039665832],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99908674,0.000008701922,0.0003215631,0.000112015936,0.0003152182,0.00015578052],"domain_scores_gemma":[0.99971706,0.00001804163,0.00014456047,0.000056851517,0.0000041279004,0.000059376576],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000396995,0.00007915929,0.00012314845,0.00012742245,0.000031559815,0.000015234477,0.0001328938,0.000032522064,0.00010223923],"category_scores_gemma":[0.000023522822,0.00006472094,0.000023932347,0.00023962795,0.00024363535,0.00031591256,0.00006631646,0.00008585839,0.000007002851],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000067366973,0.000064667045,0.08662082,0.0000032550365,0.0000010834907,0.0000043096848,0.000077724435,0.0018846649,0.9106655,0.000011621873,0.00002262744,0.0006369855],"study_design_scores_gemma":[0.00036656953,0.00010312226,0.81734204,0.000016433,0.000003987058,0.000017304452,0.000032940712,0.0012775268,0.18030585,0.000010533223,0.0004407289,0.00008296556],"about_ca_topic_score_codex":0.000052585452,"about_ca_topic_score_gemma":0.0000129177315,"teacher_disagreement_score":0.73072124,"about_ca_system_score_codex":0.00017080782,"about_ca_system_score_gemma":0.0000072538965,"threshold_uncertainty_score":0.26392433},"labels":[],"label_agreement":null},{"id":"W2054028613","doi":"10.1016/j.jhazmat.2014.08.016","title":"Pilot-scale bioremediation of a petroleum hydrocarbon-contaminated clayey soil from a sub-Arctic site","year":2014,"lang":"en","type":"article","venue":"Journal of Hazardous Materials","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":80,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Luonnontieteiden ja Tekniikan Tutkimuksen Toimikunta; Imperial Oil Limited","keywords":"Bioremediation; Biodegradation; Biostimulation; Petroleum; Environmental chemistry; Soil water; Soil contamination; Environmental science; Hydrocarbon; Environmental remediation; Microcosm; Environmental engineering; Chemistry; Waste management; Contamination; Soil science; Ecology; Biology","score_opus":0.005380823951091052,"score_gpt":0.18779117617489702,"score_spread":0.18241035222380597,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054028613","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982433,0.000024596264,0.000095564836,0.00022138754,0.0010036908,0.0001045429,0.00006900651,0.000013916829,0.00022402818],"genre_scores_gemma":[0.9990691,0.000064460946,0.00032613595,0.00019140686,0.0002617716,9.789998e-7,0.000022755456,0.00001779849,0.000045585042],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979952,0.00023217038,0.0008765431,0.00018130541,0.00048260906,0.00023215158],"domain_scores_gemma":[0.99843675,0.00008082388,0.0011004801,0.00018958517,0.000056668883,0.00013571909],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000926973,0.00017366205,0.00046174473,0.000089145826,0.00004456739,0.000050545885,0.00024815148,0.000085335225,0.0017457734],"category_scores_gemma":[0.0001634333,0.00013711477,0.000097109834,0.00012716065,0.00010813097,0.00021636124,0.00007788459,0.000102091886,0.00027642687],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026104087,0.00012281847,0.017760273,0.000014265972,0.000023127615,0.0000053119898,0.0002093753,0.00006723564,0.98026615,0.0000012877742,0.0008837561,0.00038533297],"study_design_scores_gemma":[0.0012084704,0.0005462918,0.10312604,0.00006194034,0.000060361795,0.000018645245,0.000019673398,0.00016476223,0.8939958,0.00012895773,0.00051570544,0.00015331779],"about_ca_topic_score_codex":0.0006699271,"about_ca_topic_score_gemma":0.0003635661,"teacher_disagreement_score":0.08627034,"about_ca_system_score_codex":0.00013731256,"about_ca_system_score_gemma":0.000027408296,"threshold_uncertainty_score":0.9991668},"labels":[],"label_agreement":null},{"id":"W2054279594","doi":"10.1016/j.watres.2012.06.036","title":"Benzene removal by a novel modification of enhanced anaerobic biostimulation","year":2012,"lang":"en","type":"article","venue":"Water Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Federated Co-operatives (Canada); Stantec (Canada)","funders":"","keywords":"Persulfate; Chemistry; Benzene; Bioremediation; Environmental chemistry; Biodegradation; Nitrate; Sulfate; Biostimulation; Inorganic chemistry; Organic chemistry; Bacteria; Catalysis","score_opus":0.07067262333081163,"score_gpt":0.33450530585168897,"score_spread":0.2638326825208773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054279594","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968842,0.000014677883,0.0007854392,0.00027096667,0.000050987932,0.00020021424,0.000014402205,0.000011629669,0.001767446],"genre_scores_gemma":[0.99779326,0.000010784605,0.0010570246,0.000025420124,0.000028378849,0.000003359556,0.00007259742,0.0000068557933,0.001002317],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988232,0.00006879966,0.00016670795,0.00015525456,0.00043097162,0.00035505395],"domain_scores_gemma":[0.9996658,0.000010719116,0.000028879605,0.00017449033,0.000028284616,0.00009182508],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000894332,0.000059733462,0.00006864071,0.00005045362,0.00007330833,0.000012967197,0.0001449619,0.00006294524,0.001879017],"category_scores_gemma":[0.000032948483,0.000042087962,0.000021017027,0.00021516591,0.00011400205,0.00019246954,0.00010846119,0.000088702705,0.0011593966],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020306228,0.00012051859,0.0019766225,0.0000040091195,0.0000017966706,7.834674e-8,0.0005034778,0.00003258109,0.9941567,0.000014179064,0.001622599,0.0015470844],"study_design_scores_gemma":[0.00020491732,0.00002986397,0.0088132,0.0000033279011,0.0000013611311,9.343623e-7,0.000022459748,0.00029827136,0.9846463,0.00001613343,0.0059037046,0.00005951028],"about_ca_topic_score_codex":0.00024595126,"about_ca_topic_score_gemma":0.000013397682,"teacher_disagreement_score":0.0095104305,"about_ca_system_score_codex":0.00009732044,"about_ca_system_score_gemma":0.0000041379744,"threshold_uncertainty_score":0.9996183},"labels":[],"label_agreement":null},{"id":"W2055029338","doi":"10.1016/j.chembiol.2005.05.017","title":"Resolving the Profile of Metabolites Generated during Oxidation of Dibenzofuran and Chlorodibenzofurans by the Biphenyl Catabolic Pathway Enzymes","year":2005,"lang":"en","type":"article","venue":"Chemistry & Biology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Dibenzofuran; Catabolism; Biphenyl; Enzyme; Metabolism; Biochemistry; Biology; Chemistry; Amino acid; Organic chemistry","score_opus":0.005121012726875431,"score_gpt":0.1948833774841486,"score_spread":0.18976236475727318,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055029338","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99721175,0.0014753853,0.000005105003,0.0005449168,0.000026081265,0.00012289849,0.00012666864,0.000011560123,0.00047564215],"genre_scores_gemma":[0.999124,0.00025464845,0.00010395245,0.000068774636,0.00006271672,0.0000053927274,0.00008549082,0.000005664925,0.00028937246],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992448,0.00004733971,0.00025855593,0.00020027233,0.00007946241,0.00016958547],"domain_scores_gemma":[0.99951434,0.000046420366,0.0001774112,0.00021122949,0.000016424598,0.000034169985],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018910304,0.00011092956,0.0001433784,0.0000068288737,0.00010128308,0.0000083159175,0.00022439427,0.00008798027,0.0009795525],"category_scores_gemma":[0.00006195397,0.00006228108,0.00003301481,0.00013922194,0.00042388748,0.000051857198,0.000095741314,0.000081644605,0.000008481409],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001233841,0.000022678192,0.0073656095,0.000012983371,0.000009732119,5.1037635e-8,0.0002762518,0.000003993567,0.989269,0.0000114384175,0.00032633755,0.0026895618],"study_design_scores_gemma":[0.00019465908,0.0000064940455,0.014355533,0.0000041335584,0.000009941839,0.0000032144058,0.00008669458,0.0000574238,0.97707653,0.000006762271,0.008125875,0.00007276675],"about_ca_topic_score_codex":0.00010318491,"about_ca_topic_score_gemma":0.00003250992,"teacher_disagreement_score":0.012192522,"about_ca_system_score_codex":0.00001865108,"about_ca_system_score_gemma":0.0000104522105,"threshold_uncertainty_score":0.99993366},"labels":[],"label_agreement":null},{"id":"W2055981117","doi":"10.2134/jeq2000.00472425002900010040x","title":"Relationship of Soil Organic Matter Characteristics to Organic Contaminant Sequestration and Bioavailability","year":2000,"lang":"en","type":"article","venue":"Journal of Environmental Quality","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"McGill University; University of Kansas; Michigan State University; University of Michigan; Office of Research and Development","keywords":"Organic matter; Environmental chemistry; Sorption; Desorption; Chemistry; Phenanthrene; Bioavailability; Mineralization (soil science); Soil organic matter; Soil water; Adsorption; Soil science; Environmental science; Organic chemistry","score_opus":0.014327330366460639,"score_gpt":0.2376404639285281,"score_spread":0.22331313356206747,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055981117","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991353,0.000012849756,0.00005095773,0.00037527308,0.00006020709,0.00012123242,0.000060002367,0.0000031563943,0.00018100237],"genre_scores_gemma":[0.9988908,0.000049275357,0.00031568154,0.000309777,0.000029499683,3.2230858e-7,0.0000071154077,0.000007779542,0.0003897131],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99851507,0.00016741848,0.0007351177,0.00015887778,0.00029440378,0.00012913915],"domain_scores_gemma":[0.99926144,0.00006226578,0.00037293165,0.00015489224,0.0000056611243,0.00014279613],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007634348,0.000114548086,0.00022069197,0.000024242972,0.00005612113,0.00001576085,0.00011351993,0.000075965516,0.03109942],"category_scores_gemma":[0.000057841797,0.00009645508,0.00004957448,0.00008989483,0.00018251581,0.00020646585,0.000048604506,0.00012939716,0.0006738384],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048832822,0.0000907913,0.5491841,0.000006271822,0.0000039233396,0.0000011555924,0.00027653534,0.00000193609,0.44884703,0.0000013844924,0.00013668621,0.0014014047],"study_design_scores_gemma":[0.00027598793,0.00014210232,0.96920425,0.000009354077,0.000017570415,0.000019856576,0.00009585061,0.000004797003,0.029517956,0.000041913958,0.00056298653,0.0001073479],"about_ca_topic_score_codex":0.000027164699,"about_ca_topic_score_gemma":0.00003366925,"teacher_disagreement_score":0.42002022,"about_ca_system_score_codex":0.00020259764,"about_ca_system_score_gemma":0.000011887424,"threshold_uncertainty_score":0.9697863},"labels":[],"label_agreement":null},{"id":"W2056222624","doi":"10.1038/sj.jim.7000006","title":"Phenol metabolism by two microorganisms isolated from Amazonian forest soil samples","year":2000,"lang":"en","type":"article","venue":"Journal of Industrial Microbiology & Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Microorganism; Phenol; Catechol; Alcaligenes faecalis; Chemistry; Alcaligenes; Metabolite; Phenols; Biochemistry; Mineralization (soil science); Enzyme; Microbiology; Metabolism; Extracellular; Biology; Bacteria; Organic chemistry; Pseudomonas","score_opus":0.010681185084434943,"score_gpt":0.20146118834234927,"score_spread":0.19078000325791433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056222624","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928039,0.00036496273,0.000075386226,0.0050341995,0.00086712703,0.00020986187,0.0004295004,0.00009047573,0.00012462275],"genre_scores_gemma":[0.9962018,0.0004699556,0.0013194476,0.0011985068,0.00039158599,0.000001166679,0.00011086594,0.00003287655,0.00027375686],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975988,0.00021376705,0.0010268808,0.00044695364,0.00011247859,0.00060111744],"domain_scores_gemma":[0.99868757,0.000083545674,0.0006990698,0.00033439175,0.000033977296,0.00016143531],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00037358876,0.00035829277,0.00068369065,0.00015741361,0.00015271606,0.0000390538,0.00093446294,0.0014917674,0.014938451],"category_scores_gemma":[0.00011014486,0.00028862944,0.0001906464,0.0004846546,0.000828207,0.00016247487,0.00017312108,0.0011289383,0.0011321583],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027190222,0.00013604539,0.004827771,3.8993434e-7,0.000101440135,0.000020294487,0.000056033212,0.000021839034,0.9219042,0.0000068391805,0.04740491,0.025248306],"study_design_scores_gemma":[0.0029026163,0.00034328867,0.00061803224,0.000017860282,0.00008742624,0.000323811,0.00005686513,0.000009159583,0.68777376,0.00018422141,0.30735615,0.00032683022],"about_ca_topic_score_codex":0.0008654011,"about_ca_topic_score_gemma":0.0005387385,"teacher_disagreement_score":0.25995123,"about_ca_system_score_codex":0.00019062683,"about_ca_system_score_gemma":0.00007406541,"threshold_uncertainty_score":0.9999566},"labels":[],"label_agreement":null},{"id":"W2056488727","doi":"10.1007/s00300-007-0252-8","title":"Long-term changes of bacterial abundance, hydrocarbon concentration and toxicity during a biostimulation treatment of oil-amended organic and mineral sub-Antarctic soils","year":2007,"lang":"en","type":"article","venue":"Polar Biology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Rimouski","funders":"Natural Sciences and Engineering Research Council of Canada; Institut Polaire Français Paul Emile Victor","keywords":"Bioremediation; Biostimulation; Soil water; Fertilizer; Environmental chemistry; Environmental science; Agronomy; Biology; Soil science; Contamination; Ecology; Chemistry","score_opus":0.009589638350164353,"score_gpt":0.2306977746260057,"score_spread":0.22110813627584136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056488727","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99957794,0.00010091529,0.000017102284,0.00005596758,0.0000810555,0.00009943756,0.000031118183,0.000007099815,0.000029340941],"genre_scores_gemma":[0.9994119,0.0003843374,0.00008062254,0.000016629314,0.000039044808,5.5753895e-7,0.00005461113,0.000003829049,0.000008501892],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99942374,0.000036364137,0.00017723291,0.0001689107,0.000046220233,0.00014750406],"domain_scores_gemma":[0.99972665,0.000025179997,0.00013085714,0.00006362981,0.000006421849,0.000047273883],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000090074296,0.00009060635,0.0001501335,0.000022008962,0.00003218056,0.0000045083625,0.000029051513,0.00008373705,0.00013648407],"category_scores_gemma":[0.000013379752,0.00007482043,0.000014700089,0.0000675551,0.00017547964,0.000042602573,0.000026756346,0.00001932545,0.0000019995568],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008005366,0.000036940168,0.35974756,0.000009179288,0.0000071312056,4.978774e-7,0.00019878334,2.0769731e-7,0.63749063,0.000001572924,2.7561177e-7,0.0024271777],"study_design_scores_gemma":[0.0005163384,0.00020525184,0.43818274,0.000004124826,0.000009161787,0.000004316612,0.0000045228307,0.0000199846,0.5609995,0.0000041790954,0.000005944135,0.00004393976],"about_ca_topic_score_codex":0.00014518811,"about_ca_topic_score_gemma":0.0015088444,"teacher_disagreement_score":0.07843517,"about_ca_system_score_codex":0.00006699213,"about_ca_system_score_gemma":0.000005560643,"threshold_uncertainty_score":0.30510888},"labels":[],"label_agreement":null},{"id":"W2057027281","doi":"10.1139/w01-040","title":"Biotransformation and partial mineralization of the explosive 2,4,6-trinitrotoluene (TNT) by rhizobia","year":2001,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada; Institut national de la recherche scientifique","keywords":"Rhizobia; Trinitrotoluene; Mineralization (soil science); Biotransformation; Bioaugmentation; Bioremediation; Biodegradation; Environmental chemistry; Microbiology; Biology; Soil water; Rhizobiaceae; Chemistry; Rhizobium; Bacteria; Contamination; Nitrogen fixation; Biochemistry; Ecology; Symbiosis","score_opus":0.006366413978091262,"score_gpt":0.17719805517137435,"score_spread":0.1708316411932831,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057027281","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99825144,0.00010797815,0.00008482733,0.00096457964,0.00017381003,0.00010813829,0.000058855843,0.0000011530983,0.00024921767],"genre_scores_gemma":[0.9993549,0.00008562635,0.000051427593,0.0004012159,0.000019497435,3.376989e-7,0.00001130532,0.0000034820496,0.00007220296],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99939877,0.00007225325,0.00028005443,0.000066698354,0.000034665398,0.0001475384],"domain_scores_gemma":[0.9995662,0.000012487049,0.00020984832,0.000060968316,0.000025613912,0.0001248582],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014286976,0.00006631477,0.000109507506,0.00004333966,0.00006401216,0.000008803254,0.00013824357,0.00007809574,0.0007446057],"category_scores_gemma":[0.00003214807,0.000046213514,0.00003854691,0.00013700908,0.00021719477,0.00009536256,0.00001081172,0.00007361922,0.00001376542],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012730418,0.0000066706243,0.056174137,0.0000019406793,0.0000065093764,0.000001781046,0.0002388994,0.00001359098,0.93468404,0.000014009323,0.008301776,0.00054393464],"study_design_scores_gemma":[0.0010613927,0.00018243585,0.025027096,0.000034410084,0.000032577227,0.00055706874,0.00015175059,0.000032181284,0.7481984,0.000041321946,0.22450536,0.00017601198],"about_ca_topic_score_codex":0.0014356648,"about_ca_topic_score_gemma":0.012316605,"teacher_disagreement_score":0.21620359,"about_ca_system_score_codex":0.00007283845,"about_ca_system_score_gemma":0.000069892354,"threshold_uncertainty_score":0.81529105},"labels":[],"label_agreement":null},{"id":"W2057422374","doi":"10.1074/jbc.275.21.15701","title":"Identification of a Serine Hydrolase as a Key Determinant in the Microbial Degradation of Polychlorinated Biphenyls","year":2000,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":98,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University; Université Laval","funders":"","keywords":"Hydrolase; Chemistry; Degradation (telecommunications); Serine; Identification (biology); Serine hydrolase; Biochemistry; Microbial biodegradation; Environmental chemistry; Biology; Microorganism; Enzyme; Bacteria; Ecology; Genetics; Computer science","score_opus":0.011271959732752912,"score_gpt":0.22807854672662484,"score_spread":0.21680658699387192,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057422374","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99937105,0.000021083859,0.0000042441025,0.00017661734,0.000022984344,0.000058083435,0.000011618552,0.000001865614,0.0003324656],"genre_scores_gemma":[0.9995993,0.00011349131,0.000069547794,0.000050002945,0.000021518834,4.6947807e-7,0.000005587707,0.000001817733,0.00013828982],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99902886,0.000049601313,0.0005766941,0.000092129274,0.00015781834,0.000094904884],"domain_scores_gemma":[0.99939156,0.000035602596,0.00042488202,0.00009595318,0.000018207007,0.000033804008],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00045879348,0.00007231766,0.0001546145,0.000014047175,0.000017734612,0.0000071409972,0.00025699014,0.00009047358,0.0019153822],"category_scores_gemma":[0.00009796222,0.0000414634,0.00007250309,0.00019525868,0.00013850955,0.00006305625,0.00002204391,0.00011312534,0.00001640685],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000163247,0.00016843715,0.0072492445,0.00000780992,0.0000033442725,0.000009097396,0.0000752731,0.000014016929,0.9892857,3.829117e-7,0.000058614645,0.0029648219],"study_design_scores_gemma":[0.00033688507,0.00009897233,0.039536744,0.000016249958,0.0000061640917,0.00009394836,0.000046143436,0.000033083943,0.9592722,0.000034718465,0.0004753968,0.000049500308],"about_ca_topic_score_codex":0.000025192272,"about_ca_topic_score_gemma":0.0000037116322,"teacher_disagreement_score":0.0322875,"about_ca_system_score_codex":0.000036922585,"about_ca_system_score_gemma":0.000012557904,"threshold_uncertainty_score":0.998997},"labels":[],"label_agreement":null},{"id":"W2059362229","doi":"10.1016/j.chemosphere.2005.06.057","title":"Phytotoxicity of nitroaromatic energetic compounds freshly amended or weathered and aged in sandy loam soil","year":2005,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Strategic Environmental Research and Development Program; U.S. Department of Defense","keywords":"Phytotoxicity; Seedling; Loam; Lolium perenne; Shoot; Agronomy; Soil water; Perennial plant; Chemistry; Horticulture; Environmental science; Biology","score_opus":0.008826280090077894,"score_gpt":0.21059724552832426,"score_spread":0.20177096543824638,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059362229","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99427867,0.00007364661,0.000009836891,0.0001261873,0.0000277438,0.00014352184,0.0000091027705,0.000019796194,0.005311479],"genre_scores_gemma":[0.99636173,0.000057325036,0.0022158506,0.00020516278,0.000021227672,0.0000031328173,0.0000055273713,0.000008940851,0.0011211158],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99914676,0.000035736335,0.00025943594,0.0002105027,0.00015887077,0.00018871657],"domain_scores_gemma":[0.9996355,0.000030088766,0.000098228826,0.00015771032,0.000004151112,0.000074290736],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013023944,0.00012727527,0.00019881742,0.0000074587297,0.00003303466,0.000013939476,0.00013266383,0.00007684418,0.0051242905],"category_scores_gemma":[0.000028293298,0.000099999124,0.000029847419,0.00018021691,0.00015731655,0.00009261239,0.000071928494,0.00008314556,0.00010541886],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006415361,0.00018649499,0.04331437,0.000029618932,0.000006212456,0.000003898033,0.00045932882,0.00006123701,0.94644505,0.0000018088186,0.0042187218,0.0052091135],"study_design_scores_gemma":[0.00164225,0.000065419794,0.11980953,0.000038551792,0.000009665143,0.0000067280585,0.00017085357,0.0017733794,0.874705,0.00007613522,0.0014738716,0.00022860985],"about_ca_topic_score_codex":0.0001276615,"about_ca_topic_score_gemma":0.003948654,"teacher_disagreement_score":0.07649516,"about_ca_system_score_codex":0.00009244008,"about_ca_system_score_gemma":0.000012506032,"threshold_uncertainty_score":0.9957852},"labels":[],"label_agreement":null},{"id":"W2059900742","doi":"10.1007/s00253-003-1364-x","title":"Metabolism of hexahydro-1,3,5-trinitro-1,3,5-triazine through initial reduction to hexahydro-1-nitroso-3,5-dinitro-1,3,5-triazine followed by denitration in Clostridium bifermentans HAW-1","year":2003,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":74,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Biotechnology Research Institute","funders":"Strategic Environmental Research and Development Program; U.S. Department of Defense","keywords":"Chemistry; Nitrite; Methanol; Nitroso; Formaldehyde; Triazine; Dry weight; Nitrosation; Environmental chemistry; Nitration; Nuclear chemistry; Medicinal chemistry; Organic chemistry; Nitrate; Biology; Botany","score_opus":0.006542308885987526,"score_gpt":0.21904020263116067,"score_spread":0.21249789374517314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059900742","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99371505,0.00024601424,0.0005226622,0.0018271505,0.0004965295,0.0011498753,0.00024132773,0.00012244663,0.0016789447],"genre_scores_gemma":[0.9941729,0.00037763626,0.0042461306,0.0006460909,0.000054043987,0.000051275456,0.00027389466,0.000035032386,0.00014299931],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967901,0.00021919516,0.0010149225,0.0010351533,0.00014415574,0.00079648406],"domain_scores_gemma":[0.99892133,0.000084192936,0.00037534523,0.0004570579,0.000026327793,0.00013575878],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00055948284,0.0005100891,0.0008023983,0.0003313041,0.00016710325,0.000018972647,0.00036533872,0.0010058634,0.0006757102],"category_scores_gemma":[0.00013492224,0.00048129793,0.00010692182,0.0012845537,0.0008711599,0.0001675251,0.0002455478,0.0005599219,0.00026301353],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041368758,0.00031224423,0.00092819677,0.000011396777,0.000045227473,0.0000071008917,0.00016622926,0.000009387353,0.99162835,0.0021417623,0.0036659825,0.0006704334],"study_design_scores_gemma":[0.002977678,0.00023823867,0.0003449744,0.000011343427,0.000054477732,0.00014286042,0.00019561022,0.0000033276112,0.9504816,0.00064773177,0.04442756,0.00047457693],"about_ca_topic_score_codex":0.00014455579,"about_ca_topic_score_gemma":0.00022759415,"teacher_disagreement_score":0.04114673,"about_ca_system_score_codex":0.00016792372,"about_ca_system_score_gemma":0.00004932219,"threshold_uncertainty_score":0.99976385},"labels":[],"label_agreement":null},{"id":"W2060503465","doi":"10.1007/s11274-011-0806-3","title":"Effect of dirhamnolipid on the removal of phenol catalyzed by laccase in aqueous solution","year":2011,"lang":"en","type":"article","venue":"World Journal of Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":49,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Northern British Columbia","funders":"","keywords":"Phenol; Chemistry; Ammonium bromide; Laccase; Pulmonary surfactant; Aqueous solution; Phenols; Nuclear chemistry; Sodium dodecyl sulfate; Cationic polymerization; Catalysis; Ammonium; Bromide; Inorganic chemistry; Chromatography; Organic chemistry; Enzyme; Biochemistry","score_opus":0.007108927108615024,"score_gpt":0.1984823134340758,"score_spread":0.19137338632546078,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060503465","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978411,0.00060226733,0.000011102504,0.00092484517,0.00011611656,0.00011913585,0.000019608726,0.0000048611687,0.00036091902],"genre_scores_gemma":[0.9994504,0.00024095317,0.00014480861,0.00009783481,0.000007391323,4.2643444e-7,0.0000025073964,0.000003720977,0.000051956584],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990866,0.00019178692,0.0003957536,0.00012553821,0.000038634982,0.00016169126],"domain_scores_gemma":[0.9993062,0.00011189511,0.0004219499,0.00012740974,0.000009631529,0.000022882272],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00070758857,0.00010768652,0.0002794471,0.00014680784,0.000030350451,0.0000011509369,0.0002359658,0.0002230668,0.0003076462],"category_scores_gemma":[0.000079572776,0.00006249757,0.00005461624,0.0002400489,0.0007491082,0.00002884469,0.00009280342,0.00028526253,0.000012635758],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004502841,0.000087252425,0.0028592846,0.0000072893454,0.00001652686,0.000019095238,0.00010166361,3.976573e-7,0.98270196,0.00006536175,0.0012680405,0.012422825],"study_design_scores_gemma":[0.00067923666,0.00067746296,0.00065393525,0.000026246116,0.000016223687,0.00036157522,0.000018493725,0.0000027169658,0.9936721,0.000056226036,0.003773771,0.000062064544],"about_ca_topic_score_codex":0.00007525198,"about_ca_topic_score_gemma":0.00024749825,"teacher_disagreement_score":0.012360761,"about_ca_system_score_codex":0.000034425975,"about_ca_system_score_gemma":0.000008233563,"threshold_uncertainty_score":0.336851},"labels":[],"label_agreement":null},{"id":"W2060675629","doi":"10.1007/s00253-003-1380-x","title":"Polychlorinated biphenyl (PCB) degradation and persistence of a gfp -marked Ralstonia eutropha H850 in PCB-contaminated soil","year":2003,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Environment and Climate Change Canada; University of Guelph","funders":"Danmarks Tekniske Universitet","keywords":"Ralstonia; Microcosm; Microorganism; Polychlorinated biphenyl; Green fluorescent protein; Soil microbiology; Biology; Ralstonia solanacearum; Soil contamination; Microbiology; Environmental chemistry; Chemistry; Contamination; Bacteria; Soil water; Gene; Biochemistry; Ecology; Genetics","score_opus":0.006497434827636045,"score_gpt":0.17607481334497369,"score_spread":0.16957737851733765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060675629","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981754,0.00021679468,0.000046744757,0.00047653652,0.00007116597,0.00027911112,0.000021094862,0.000045065735,0.0006681281],"genre_scores_gemma":[0.99840087,0.00041191018,0.0008186275,0.00019951703,0.0000025929683,0.000005118282,0.000029824056,0.000008110361,0.00012343515],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99880236,0.000069758215,0.00029052235,0.0004711236,0.00003402235,0.00033223804],"domain_scores_gemma":[0.9995733,0.00004397707,0.00015421787,0.00017539585,0.000008021533,0.00004507701],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002743369,0.0001948688,0.00029694536,0.00015069419,0.0000766748,0.000006060869,0.00015080629,0.0006139879,0.00023166288],"category_scores_gemma":[0.000040246894,0.000170543,0.000024713936,0.0004145831,0.0010355639,0.00004555341,0.00012480596,0.00022897258,0.000032832806],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000875737,0.000065080356,0.011760854,0.000008958334,0.000012903488,0.0000035077624,0.00007484561,0.0000011792127,0.98166716,0.0012167771,0.000077133984,0.005024024],"study_design_scores_gemma":[0.001370955,0.00014473981,0.011755322,0.000010885216,0.000016745136,0.00007492341,0.00023839649,0.000014498017,0.98114496,0.0001394544,0.0048536393,0.00023548082],"about_ca_topic_score_codex":0.00010248231,"about_ca_topic_score_gemma":0.0005002634,"teacher_disagreement_score":0.0047885426,"about_ca_system_score_codex":0.000056107103,"about_ca_system_score_gemma":0.000015025576,"threshold_uncertainty_score":0.6954542},"labels":[],"label_agreement":null},{"id":"W2060909025","doi":"10.1016/j.chemosphere.2007.10.062","title":"Bioaugmentation of aerobic microbial granules with Pseudomonas putida carrying TOL plasmid","year":2008,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":66,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"","keywords":"Bioaugmentation; Pseudomonas putida; Microcosm; Plasmid; Biodegradation; Microbiology; Chemistry; Activated sludge; Bacteria; Pseudomonas; Pseudomonas aeruginosa; Microorganism; Biology; Environmental engineering; Environmental chemistry; Biochemistry; DNA; Sewage treatment; Gene; Environmental science","score_opus":0.00880994180061756,"score_gpt":0.18007641662406362,"score_spread":0.17126647482344606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060909025","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99583596,0.000023025133,0.000076692144,0.00011332695,0.000079706406,0.00018446828,0.000013882981,0.000033313863,0.003639611],"genre_scores_gemma":[0.99489117,0.0000327314,0.00421882,0.00016471952,0.000023683977,0.0000025402849,0.000028823713,0.000012650582,0.00062484323],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991215,0.000017285325,0.00020996928,0.00024544407,0.00021086428,0.00019497017],"domain_scores_gemma":[0.9996177,0.000014160087,0.00012765371,0.00015563799,0.000014068089,0.000070772716],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000055929104,0.00013957413,0.0001503125,0.000007246124,0.00010356199,0.0000092367645,0.00014768896,0.00007061416,0.0029773184],"category_scores_gemma":[0.000007764039,0.000112910486,0.00004555716,0.00021748307,0.00028927016,0.00013268073,0.00005107303,0.00006988537,0.00026814034],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059964197,0.000064954795,0.07709012,0.00001288887,0.000009514019,0.0000100074885,0.00046878145,0.000085673986,0.9150405,0.000002930394,0.006234742,0.00091991876],"study_design_scores_gemma":[0.00084121834,0.00006110905,0.027016822,0.000019459494,0.000011397468,0.00005314222,0.0001454304,0.000032054373,0.9695815,0.0000056717945,0.0020496838,0.00018255496],"about_ca_topic_score_codex":0.00019136225,"about_ca_topic_score_gemma":0.0002584347,"teacher_disagreement_score":0.05454095,"about_ca_system_score_codex":0.00008326453,"about_ca_system_score_gemma":0.000021445498,"threshold_uncertainty_score":0.9979341},"labels":[],"label_agreement":null},{"id":"W2061080291","doi":"10.1007/s00449-003-0336-y","title":"On-line estimation of biodegradation in an unsaturated soil","year":2003,"lang":"en","type":"article","venue":"Bioprocess and Biosystems Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Natural Sciences and Engineering Research Council of Canada; Polytechnique Montréal","funders":"","keywords":"Biodegradation; Estimator; Microcosm; Hexadecane; Industrial and production engineering; Soil water; Observer (physics); Environmental science; Bacterial growth; Mathematics; Soil science; Environmental engineering; Chemistry; Environmental chemistry; Statistics; Engineering","score_opus":0.010349143915593792,"score_gpt":0.21210694886157522,"score_spread":0.20175780494598142,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061080291","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99921256,0.00003237036,0.0004531551,0.000013003157,0.00007660283,0.00009216194,0.0000072033986,0.00002128576,0.00009164627],"genre_scores_gemma":[0.99956137,0.000010572171,0.00037555062,0.000010486982,0.00000570854,0.0000018000123,0.000013128006,0.0000051898496,0.000016193513],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994661,0.00001130587,0.00018268451,0.00014401387,0.00009796535,0.00009790208],"domain_scores_gemma":[0.9998223,0.000009240254,0.000054564392,0.00006453041,0.000007250977,0.00004207323],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014917563,0.0000841024,0.00009531845,0.000056010376,0.000016375414,0.00001536246,0.000041974625,0.00005868328,0.000037547466],"category_scores_gemma":[0.000033931035,0.00006835902,0.000009060125,0.00026516322,0.000014876324,0.000121072386,0.0000069583516,0.000037554764,0.00000856655],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011680459,0.00006483184,0.008053571,0.0000982843,0.0000026230273,0.000001080064,0.0001312236,0.03426315,0.95429945,0.00032266055,0.000010186453,0.0027412886],"study_design_scores_gemma":[0.0006357825,0.0001574579,0.019646673,0.00014217982,0.0000050828357,0.0000065088075,0.00007772459,0.21095495,0.7678979,0.00003302624,0.00016119357,0.00028149094],"about_ca_topic_score_codex":0.00006796715,"about_ca_topic_score_gemma":0.000055674052,"teacher_disagreement_score":0.18640149,"about_ca_system_score_codex":0.000029639737,"about_ca_system_score_gemma":0.0000044308654,"threshold_uncertainty_score":0.27876},"labels":[],"label_agreement":null},{"id":"W2061758849","doi":"10.1021/es051493g","title":"Biological Enhancement of Tetrachloroethene Dissolution and Associated Microbial Community Changes","year":2006,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":110,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Environmental Security Technology Certification Program","keywords":"Bioaugmentation; Dehalococcoides; Reductive dechlorination; Biostimulation; Environmental chemistry; Dissolution; Chemistry; Geobacter; Bioremediation; Groundwater; Contamination; Enrichment culture; Aquifer; Tetrachloroethylene; Electron donor; Environmental science; Biodegradation; Trichloroethylene; Bacteria; Geology; Ecology; Catalysis; Biofilm; Vinyl chloride","score_opus":0.009674260808507812,"score_gpt":0.20815277678424604,"score_spread":0.19847851597573823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061758849","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984246,0.000043370284,0.000054714896,0.00046144158,0.0000657051,0.0001808492,0.000031370957,0.000045419816,0.000692523],"genre_scores_gemma":[0.99930245,0.00007154917,0.0004049107,0.00007324699,0.000007743749,0.000004589273,0.000020923857,0.000004396171,0.00011016729],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99883646,0.00006114318,0.00021111421,0.0002960792,0.00024211837,0.00035306189],"domain_scores_gemma":[0.9995562,0.000022275843,0.00015641625,0.00021052091,0.0000028012653,0.000051803076],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0005837631,0.00013443173,0.00015422906,0.00012178485,0.00036198975,0.000011622974,0.00038150378,0.00015415312,0.0007356133],"category_scores_gemma":[0.000045889366,0.00011280336,0.000021664224,0.0005473501,0.0042266655,0.000106798325,0.00057274575,0.00019310717,0.00007239029],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000578269,0.00026075685,0.11941912,7.533268e-7,0.0000015416955,5.4742327e-7,0.000055623845,0.0000026777777,0.8769172,0.0000400503,0.000060366045,0.0032355993],"study_design_scores_gemma":[0.00019624468,0.00019981063,0.35056475,0.0000041948306,0.0000037796692,0.000004975763,0.00013900055,0.00002186507,0.6477357,0.00028376273,0.0007354111,0.00011050274],"about_ca_topic_score_codex":0.0002935718,"about_ca_topic_score_gemma":0.0003463871,"teacher_disagreement_score":0.23114562,"about_ca_system_score_codex":0.0003322641,"about_ca_system_score_gemma":0.000005796274,"threshold_uncertainty_score":0.99848324},"labels":[],"label_agreement":null},{"id":"W2062387625","doi":"10.1074/jbc.m707035200","title":"The Molecular Basis for Inhibition of BphD, a C-C Bond Hydrolase Involved in Polychlorinated Biphenyls Degradation","year":2007,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Chemistry; Substituent; Tautomer; Steric effects; Hydrolysis; Moiety; Stereochemistry; Bond cleavage; Medicinal chemistry; Hydrogen bond; Biphenyl; Hydrolase; Catalysis; Molecule; Enzyme; Organic chemistry","score_opus":0.015854488573224933,"score_gpt":0.2348874942256508,"score_spread":0.21903300565242587,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062387625","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989452,0.0000718395,0.00031504812,0.0002643927,0.00003835862,0.000080276266,0.000008328544,0.0000029788064,0.0002735904],"genre_scores_gemma":[0.99920934,0.00005661433,0.00059159985,0.00008425057,0.0000258133,7.5235675e-7,0.0000068626555,0.000002529727,0.000022215374],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991619,0.000017195298,0.00044172123,0.00009070687,0.00014213841,0.00014635456],"domain_scores_gemma":[0.99938214,0.00012825239,0.00034051808,0.000063273656,0.000028139484,0.00005767449],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008536723,0.000072050585,0.00011920945,0.000014938156,0.000034980327,0.000008393687,0.0001136031,0.00011712561,0.00008964386],"category_scores_gemma":[0.00036282148,0.000042274623,0.00008339559,0.00017082923,0.00012466227,0.000048109563,0.000030750503,0.00011114122,0.0000021525157],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023112848,0.00007188375,0.012486988,0.000004992156,0.0000044106255,0.000006244987,0.000013417223,0.0000053970552,0.9857747,0.000005459185,0.00012962882,0.0012657373],"study_design_scores_gemma":[0.00044657398,0.00008692938,0.014448962,0.000016601283,0.0000043251252,0.0000062403988,0.000083726845,0.000024636265,0.9838673,0.00019727368,0.00076205673,0.00005537027],"about_ca_topic_score_codex":0.000007461814,"about_ca_topic_score_gemma":0.000011718874,"teacher_disagreement_score":0.0019619744,"about_ca_system_score_codex":0.00009987886,"about_ca_system_score_gemma":0.000011444108,"threshold_uncertainty_score":0.17239091},"labels":[],"label_agreement":null},{"id":"W2063324944","doi":"10.1128/aem.01117-09","title":"Degradation of a Mixture of Hydrocarbons, Gasoline, and Diesel Oil Additives by <i>Rhodococcus aetherivorans</i> and <i>Rhodococcus wratislaviensis</i>","year":2009,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":105,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Association Nationale de la Recherche et de la Technologie","keywords":"Chemistry; Ethylbenzene; Toluene; Benzene; Biodegradation; Xylene; Organic chemistry; Cometabolism; Hydrocarbon; Octane; Rhodococcus; Alcohol; Environmental chemistry; Bioremediation; Bacteria","score_opus":0.00272008605121809,"score_gpt":0.17052818672443243,"score_spread":0.16780810067321433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2063324944","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973235,0.00090195035,0.00003582966,0.00017548374,0.000022343958,0.0001629444,0.0005157024,0.000010549048,0.00085165864],"genre_scores_gemma":[0.9954737,0.0028241868,0.0007209743,0.0005732503,0.0000093129975,0.000003996575,0.00027248118,0.000009214128,0.00011288926],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989794,0.000051826122,0.00030979238,0.00038243766,0.000059183414,0.00021734479],"domain_scores_gemma":[0.99955976,0.000052826952,0.00017913546,0.00012475002,0.0000011971958,0.000082326755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011461976,0.00021797967,0.00031774834,0.000026681395,0.000067101006,0.0000071975805,0.00008124653,0.00016090216,0.00013574795],"category_scores_gemma":[0.000004847958,0.00018546561,0.00002838899,0.000061258565,0.0007839159,0.0000636099,0.00009464651,0.00009754503,0.0000063857774],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052298266,0.00009451336,0.006246886,0.0000110703695,0.000013006141,5.556081e-7,0.00023617127,7.2051677e-7,0.9672953,0.000021284366,0.00085689133,0.025171343],"study_design_scores_gemma":[0.001873911,0.00044223876,0.042589985,0.000028879836,0.000071208255,0.000060141465,0.0005161238,0.000029322598,0.9421043,0.00018522158,0.01159499,0.0005036926],"about_ca_topic_score_codex":0.00004088612,"about_ca_topic_score_gemma":0.000031130327,"teacher_disagreement_score":0.036343098,"about_ca_system_score_codex":0.000020337064,"about_ca_system_score_gemma":0.0000032359897,"threshold_uncertainty_score":0.7563068},"labels":[],"label_agreement":null},{"id":"W2063644798","doi":"10.1128/aem.70.7.4040-4047.2004","title":"Initial Reaction(s) in Biotransformation of CL-20 Is Catalyzed by Salicylate 1-Monooxygenase from <i>Pseudomonas</i> sp. Strain ATCC 29352","year":2004,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"U.S. Environmental Protection Agency","keywords":"Chemistry; Strain (injury); Metabolite; Monooxygenase; Electrospray ionization; Nitrite; Stereochemistry; Pseudomonas stutzeri; Biotransformation; Enzyme; Chromatography; Mass spectrometry; Medicinal chemistry; Bacteria; Organic chemistry; Biochemistry; Biology","score_opus":0.00460606851338337,"score_gpt":0.1861198665269278,"score_spread":0.18151379801354442,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2063644798","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99577314,0.00005559602,0.000052103416,0.00027116266,0.000059930895,0.0003030576,0.0029266435,0.000015671765,0.0005427041],"genre_scores_gemma":[0.99599546,0.0002821766,0.00026121206,0.00074775546,0.000018794035,0.0000072366292,0.0026577062,0.000013619014,0.000016019923],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987993,0.00002965494,0.00042614702,0.0003959071,0.000073405696,0.0002755347],"domain_scores_gemma":[0.9995979,0.000018962535,0.00014463354,0.00015177597,8.0971193e-7,0.00008590002],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000112130045,0.00021583572,0.00024739892,0.00004153869,0.000060465896,0.000008771785,0.00013061438,0.00022392714,0.0008419056],"category_scores_gemma":[0.0000013851625,0.00020563776,0.0000456149,0.000095137526,0.00040010267,0.00012599675,0.00008547265,0.00014223922,0.0002839157],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007435388,0.0001618107,0.0018924167,0.0000049045266,0.000012777747,0.0000018242486,0.0007516826,0.000015952452,0.99498916,0.000009037463,0.00027611942,0.0018099761],"study_design_scores_gemma":[0.0020975848,0.000043352902,0.004984515,0.0000070797128,0.000013228421,0.000010953207,0.00032401728,0.0000043679706,0.9873487,0.00017209041,0.004747316,0.0002468489],"about_ca_topic_score_codex":0.0006029138,"about_ca_topic_score_gemma":0.00024933217,"teacher_disagreement_score":0.007640498,"about_ca_system_score_codex":0.00016941718,"about_ca_system_score_gemma":0.000007863785,"threshold_uncertainty_score":0.92182755},"labels":[],"label_agreement":null},{"id":"W2064151369","doi":"10.1016/s0269-7491(03)00257-4","title":"Ability of bacterial biphenyl dioxygenases from Burkholderia sp. LB400 and Comamonas testosteroni B-356 to catalyse oxygenation of ortho-hydroxychlorobiphenyls formed from PCBs by plants","year":2003,"lang":"en","type":"article","venue":"Environmental Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":48,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada; Grantová Agentura České Republiky","keywords":"Comamonas testosteroni; Biphenyl; Burkholderia; Hydroxylation; Chemistry; Enzyme; Dioxygenase; Stereochemistry; Comamonas; Bacteria; Biochemistry; Organic chemistry; Biology; Pseudomonas","score_opus":0.006387495424563845,"score_gpt":0.18811519322443987,"score_spread":0.18172769779987602,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064151369","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944479,0.00009068238,0.00013907003,0.000047719943,0.00018584201,0.0005050872,0.0044128415,0.000018577966,0.00015228911],"genre_scores_gemma":[0.9978414,0.00006879923,0.00071619614,0.00012298548,0.000026147984,0.000007855,0.0011584461,0.0000190832,0.000039068545],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99808,0.00013064797,0.00057912094,0.00052642677,0.00040253345,0.0002812546],"domain_scores_gemma":[0.9990964,0.000056585934,0.00031231,0.00033207814,0.0000027775084,0.00019987243],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00019952495,0.00026693882,0.00032672673,0.000042958964,0.00008811613,0.000017513265,0.00016791272,0.00015945372,0.0037318442],"category_scores_gemma":[0.00004183399,0.00025550128,0.000072499686,0.000110358254,0.00032405803,0.00030081635,0.00014102922,0.00008176107,0.00012191464],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012587562,0.0002558894,0.071741275,0.0000042764595,0.000022952576,5.899442e-7,0.0004733115,0.00002013491,0.92503214,0.0000019645756,0.0004076478,0.0019139495],"study_design_scores_gemma":[0.0007370359,0.00010560208,0.45657632,0.000011534857,0.000020424704,0.0000011747806,0.00013467818,0.000024235256,0.54083395,0.00008002162,0.0012921711,0.00018282453],"about_ca_topic_score_codex":0.0029508201,"about_ca_topic_score_gemma":0.0008554978,"teacher_disagreement_score":0.38483503,"about_ca_system_score_codex":0.0002800965,"about_ca_system_score_gemma":0.00001185291,"threshold_uncertainty_score":0.99998975},"labels":[],"label_agreement":null},{"id":"W2064745072","doi":"10.1021/es051371o","title":"Characterization, Weathering, and Application of Sesquiterpanes to Source Identification of Spilled Lighter Petroleum Products","year":2005,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":103,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Environment and Climate Change Canada","funders":"","keywords":"Weathering; Petroleum; Identification (biology); Characterization (materials science); Environmental science; Petroleum engineering; Waste management; Geology; Environmental chemistry; Chemistry; Geochemistry; Engineering; Materials science","score_opus":0.0023176276470554128,"score_gpt":0.1853582454253335,"score_spread":0.18304061777827807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064745072","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99613416,0.000010886025,0.0021018821,0.001323961,0.000029653467,0.00028718513,0.000012232473,0.000028965014,0.00007107507],"genre_scores_gemma":[0.99866116,0.000025093785,0.00093742507,0.0000684779,0.00001352162,0.000011392272,0.0000074794534,0.0000063177617,0.00026913156],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99887073,0.000009665842,0.00030440855,0.00038167147,0.00025599095,0.00017751727],"domain_scores_gemma":[0.9994413,0.000003640243,0.00021343214,0.00028241402,0.0000057352963,0.00005342855],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002550419,0.000095390045,0.00011647275,0.0001802033,0.00008473457,0.000009883878,0.00031243297,0.00006138938,0.00017475412],"category_scores_gemma":[0.000025721882,0.00008707989,0.000013067374,0.0005965842,0.0009591661,0.0002244146,0.00026520705,0.00004450848,0.00016379771],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005213025,0.000068512396,0.05983984,0.0000028773613,0.0000011247057,4.6230973e-8,0.0002978282,0.00006542152,0.9159366,0.000023904817,0.000006785665,0.023751842],"study_design_scores_gemma":[0.00008762471,0.000049302973,0.17486376,0.0000029320433,0.000003682905,0.0000039156553,0.00007027326,0.00038779515,0.8140286,0.000009034489,0.010414697,0.00007838068],"about_ca_topic_score_codex":0.0000093957815,"about_ca_topic_score_gemma":0.0000069356415,"teacher_disagreement_score":0.11502392,"about_ca_system_score_codex":0.00011240761,"about_ca_system_score_gemma":0.0000059064273,"threshold_uncertainty_score":0.3551015},"labels":[],"label_agreement":null},{"id":"W2064900554","doi":"10.1016/j.copbio.2009.01.006","title":"Transgenic plants to improve rhizoremediation of polychlorinated biphenyls (PCBs)","year":2009,"lang":"en","type":"review","venue":"Current Opinion in Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada; Ministerstvo Školství, Mládeže a Tělovýchovy; Ministère du Développement Économique, de l’Innovation et de l’Exportation","keywords":"Bioremediation; Rhizobacteria; Polychlorinated biphenyl; Dioxygenase; Environmental remediation; Genetically modified crops; Biphenyl; Pollutant; Biodegradation; Enzyme; Transgene; Environmental chemistry; Chemistry; Biology; Biochemistry; Contamination; Bacteria; Gene; Ecology; Genetics; Rhizosphere","score_opus":0.04979635359099631,"score_gpt":0.33892299839540085,"score_spread":0.28912664480440453,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064900554","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00061918824,0.99019986,0.00009442946,0.0006076635,0.006023641,0.001870121,0.00039412713,0.00013490477,0.000056037963],"genre_scores_gemma":[0.00042966488,0.9989228,0.00015828856,0.000025706886,0.00009679105,0.000033100456,0.0002929377,0.000023158733,0.000017506654],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99742866,0.00009514424,0.0010425055,0.0007009481,0.00027671884,0.0004560108],"domain_scores_gemma":[0.9988808,0.000043380824,0.0004882473,0.00046684727,0.000009647613,0.00011109793],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002744101,0.0004156022,0.0010876623,0.000580775,0.000032833916,0.00000957266,0.0006933967,0.0009691157,0.00041281807],"category_scores_gemma":[0.000072945586,0.0003589844,0.00020170356,0.0012121511,0.00016041013,0.00006597201,0.00017281222,0.00056654355,0.0007845141],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012379254,0.00014658779,0.000021915737,0.0010730111,0.000009457062,4.7333802e-7,0.000034131313,9.431135e-7,0.0014067792,0.00004434294,0.0027512435,0.9944987],"study_design_scores_gemma":[0.0003004254,0.0001672669,0.00010281808,0.002261925,0.000022525655,0.000005931479,0.000005268665,0.000005753148,0.0015212828,0.000041079977,0.99520105,0.00036464224],"about_ca_topic_score_codex":0.00003509945,"about_ca_topic_score_gemma":0.000021926988,"teacher_disagreement_score":0.99413407,"about_ca_system_score_codex":0.00032891362,"about_ca_system_score_gemma":0.00006275527,"threshold_uncertainty_score":0.9999935},"labels":[],"label_agreement":null},{"id":"W2065022745","doi":"10.1021/bi992232k","title":"Active Site Residues of <i>cis</i>-2,3-Dihydro-2,3-dihydroxybiphenyl Dehydrogenase from <i>Comamonas testosteroni</i> Strain B-356","year":2000,"lang":"en","type":"article","venue":"Biochemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; Institut National de la Recherche Scientifique","funders":"","keywords":"Comamonas testosteroni; Stereochemistry; Dehydrogenase; Chemistry; Enzyme; NAD+ kinase; Active site; Residue (chemistry); Biphenyl; Catalytic triad; Biochemistry; Organic chemistry","score_opus":0.0046057301937468915,"score_gpt":0.18948653885643635,"score_spread":0.18488080866268947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065022745","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9838931,0.00013510491,0.0000052423434,0.00015811615,0.00005159147,0.00017705551,0.0015292753,0.0000763414,0.013974149],"genre_scores_gemma":[0.9963093,0.00007673457,0.00059923343,0.00048291468,0.000102890575,0.000005614446,0.00033910267,0.000027089513,0.0020571274],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980525,0.000050211962,0.00044499253,0.0006090991,0.00043750106,0.00040571616],"domain_scores_gemma":[0.9989362,0.00006576234,0.00019325844,0.00055072765,0.000014326302,0.0002397275],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00012713854,0.00031085676,0.00028776436,0.00001870625,0.000093976625,0.00002939357,0.00042697677,0.0002439671,0.018688047],"category_scores_gemma":[0.000036764413,0.0002980835,0.00013845655,0.00025109263,0.00035641363,0.0001547657,0.00013173714,0.00018257053,0.0011350523],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011761948,0.00016470772,0.0050535197,0.00001148013,0.000022647668,0.000012605827,0.00021055418,0.000020638106,0.98138046,4.1217788e-7,0.0046225684,0.008382786],"study_design_scores_gemma":[0.00059597444,0.000048156722,0.0066879727,0.000034021,0.000024522073,0.000006547589,0.00005002463,0.000087401626,0.9846986,0.00006247017,0.0073608607,0.0003434728],"about_ca_topic_score_codex":0.00057251466,"about_ca_topic_score_gemma":0.00014157248,"teacher_disagreement_score":0.017552994,"about_ca_system_score_codex":0.00014437594,"about_ca_system_score_gemma":0.000040654617,"threshold_uncertainty_score":0.99994713},"labels":[],"label_agreement":null},{"id":"W2065068621","doi":"10.1186/1471-2180-12-27","title":"Identification of the para-nitrophenol catabolic pathway, and characterization of three enzymes involved in the hydroquinone pathway, in pseudomonas sp. 1-7","year":2012,"lang":"en","type":"article","venue":"BMC Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":100,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Natural Science Foundation of China","keywords":"Biology; Fosmid; Dioxygenase; Pseudomonas; Biochemistry; Hydroquinone; Enzyme; Catabolism; Oxygenase; Monooxygenase; Reductase; Rhodococcus rhodochrous; Gene cluster; Metabolic pathway; Gene; Molecular biology; Cytochrome P450; Bacteria; Rhodococcus; Genetics; Metagenomics","score_opus":0.01823840554422893,"score_gpt":0.21206584763384473,"score_spread":0.1938274420896158,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065068621","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990928,0.0001139318,0.00003184034,0.00011136623,0.00011678294,0.0004044962,0.00009533814,0.000004094573,0.000029324743],"genre_scores_gemma":[0.9996888,0.000040843242,0.000040711784,0.000117409356,0.000020424593,0.000009389365,0.000060382237,0.0000055036107,0.000016514618],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99888414,0.00025134342,0.00042755247,0.0001688372,0.000063453255,0.00020469734],"domain_scores_gemma":[0.9993779,0.00005226132,0.0002910051,0.00025000746,0.000008433096,0.000020401016],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058328925,0.00010546899,0.00016698358,0.000045300632,0.00003341944,0.00000564227,0.00026808932,0.00010849619,0.00008381278],"category_scores_gemma":[0.000041357864,0.000065710185,0.000032512795,0.00028185052,0.0002947657,0.000107013395,0.00012602565,0.00009038932,0.000024925705],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000123082045,0.00007543185,0.3603317,0.000008094151,0.0000012007723,7.262811e-8,0.00063831883,0.0000011308168,0.638683,0.00007224808,0.000008798821,0.00016763552],"study_design_scores_gemma":[0.00019686473,0.000010373995,0.5452051,0.0000059989275,0.000002213486,0.000003834099,0.000059254726,0.000011683778,0.45420754,0.000027260094,0.00022310438,0.000046732803],"about_ca_topic_score_codex":0.00024735564,"about_ca_topic_score_gemma":0.0024318695,"teacher_disagreement_score":0.1848734,"about_ca_system_score_codex":0.00003376301,"about_ca_system_score_gemma":0.000017904176,"threshold_uncertainty_score":0.26795837},"labels":[],"label_agreement":null},{"id":"W2065305802","doi":"10.1016/j.watres.2011.08.011","title":"Effect of short-chain organic acids on the enhanced desorption of phenanthrene by rhamnolipid biosurfactant in soil–water environment","year":2011,"lang":"en","type":"article","venue":"Water Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":133,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina","funders":"Natural Sciences and Engineering Research Council of Canada; Major Science and Technology Program for Water Pollution Control and Treatment; Canadian Water Network","keywords":"Phenanthrene; Rhamnolipid; Chemistry; Desorption; Citric acid; Environmental chemistry; Oxalic acid; Acetic acid; Organic acid; Soil water; Organic matter; Soil contamination; Organic chemistry; Adsorption; Bacteria","score_opus":0.03138325893306658,"score_gpt":0.26512628416898365,"score_spread":0.23374302523591706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065305802","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985003,0.000008920968,0.000016639675,0.00014581555,0.0000414207,0.00050986005,0.000019748128,0.0000072039297,0.0007501109],"genre_scores_gemma":[0.9996132,0.00010852536,0.000012518082,0.000019671346,0.000008956525,0.0000134673855,0.000022857632,0.000015253728,0.00018555303],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975943,0.0005771357,0.0003410615,0.00031819902,0.0006521233,0.00051716797],"domain_scores_gemma":[0.99947697,0.00004268233,0.000033381948,0.00036594612,0.000009858961,0.00007116953],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0026491955,0.00015174675,0.00019874176,0.00006747583,0.00006772184,0.000009461098,0.0003705018,0.00010263507,0.008560972],"category_scores_gemma":[0.00002731596,0.000069084985,0.000051827526,0.00015123207,0.0004598183,0.00006977187,0.000288826,0.00022250775,0.0007831304],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002707149,0.0001726405,0.0075201085,0.000015118703,0.000007782489,0.0000012353444,0.0024068388,0.000007975137,0.9882478,0.0000018429508,0.00010203862,0.0012458906],"study_design_scores_gemma":[0.0003187395,0.0007328966,0.0025095453,0.00002021295,0.0000038432827,3.4933626e-7,0.00009212718,0.000027504104,0.99606854,0.000030364867,0.00009987773,0.00009598201],"about_ca_topic_score_codex":0.0003361219,"about_ca_topic_score_gemma":0.00007716765,"teacher_disagreement_score":0.007820743,"about_ca_system_score_codex":0.00015314722,"about_ca_system_score_gemma":0.0000047501776,"threshold_uncertainty_score":0.9999949},"labels":[],"label_agreement":null},{"id":"W2065747864","doi":"10.1002/bit.21106","title":"Kinetics of biodegradation of <i>p</i>‐xylene and naphthalene and oxygen transfer in a novel airlift immobilized bioreactor","year":2006,"lang":"en","type":"article","venue":"Biotechnology and Bioengineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Biodegradation; Bioreactor; Chemistry; Naphthalene; Oxygen; Population; Microorganism; Chromatography; Volume (thermodynamics); Airlift; Biomass (ecology); Cometabolism; Environmental chemistry; Bioremediation; Organic chemistry; Contamination; Bacteria; Biology; Ecology","score_opus":0.004467334760988987,"score_gpt":0.1688762863492825,"score_spread":0.16440895158829352,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065747864","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983442,0.00040908632,0.0007802083,0.00025389332,0.000021426307,0.00011361312,0.00003550008,0.000019573408,0.000022526749],"genre_scores_gemma":[0.99773717,0.0003333788,0.0018996552,0.0000081012395,0.0000037701436,0.0000011885267,0.000006120032,0.0000047007306,0.0000059004324],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994575,0.0000050270223,0.00020971568,0.00016464699,0.00005181002,0.00011131435],"domain_scores_gemma":[0.9998468,0.000014652976,0.000041449017,0.000072918476,0.0000039697743,0.00002018883],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006452501,0.00009470554,0.00015258823,0.00010107046,0.000009300519,0.000003329031,0.000047210808,0.00019971956,0.0000171283],"category_scores_gemma":[0.000010688006,0.00008206366,0.000012478677,0.00019253927,0.0002448387,0.000040803836,0.000044263204,0.00006103844,4.2746038e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014076731,0.00005256308,0.016498204,0.000027422679,0.0000041157773,5.2324225e-7,0.00002812854,0.0000114493005,0.98173857,0.00014962985,0.0000019144,0.0014733948],"study_design_scores_gemma":[0.00048842403,0.00007762102,0.13643293,0.00001794138,0.000006963748,0.000008717199,0.000016987833,0.00031439072,0.8623197,0.000010469986,0.00022475219,0.00008109262],"about_ca_topic_score_codex":0.00020248335,"about_ca_topic_score_gemma":0.000119509285,"teacher_disagreement_score":0.11993473,"about_ca_system_score_codex":0.000012693353,"about_ca_system_score_gemma":0.000001968827,"threshold_uncertainty_score":0.33464593},"labels":[],"label_agreement":null},{"id":"W2066146784","doi":"10.1021/es702121u","title":"Electrolytic Methanogenic−Methanotrophic Coupling for Tetrachloroethylene Bioremediation: Proof of Concept","year":2008,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Tetrachloroethylene; Bioremediation; Environmental chemistry; Chemistry; Environmental science; Ecology; Contamination; Biology; Trichloroethylene","score_opus":0.011412070599529367,"score_gpt":0.22154759057458115,"score_spread":0.21013551997505178,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066146784","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995769,0.00018227928,0.0024461513,0.00046663362,0.0001662818,0.00066078204,0.00003820554,0.00007009866,0.00020054121],"genre_scores_gemma":[0.99535024,0.00007575391,0.0042048874,0.00010406221,0.00003156496,0.00003315425,0.000013980106,0.000016317315,0.00017003526],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99772406,0.0000134177,0.00042481895,0.00063714926,0.000590017,0.0006105321],"domain_scores_gemma":[0.99916446,0.000047526988,0.000268624,0.0003825606,0.000010637016,0.00012617669],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00045462023,0.00021160171,0.00026833557,0.00027309335,0.0003678237,0.000007742341,0.000741185,0.00019331157,0.00096141465],"category_scores_gemma":[0.00013938194,0.00019261279,0.00008866943,0.0012945321,0.0045256424,0.00027323834,0.0002766061,0.00017020445,0.00008640883],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018751249,0.00013353255,0.015420972,0.0000024051953,0.0000059874537,0.0000023375674,0.00013077917,0.00052339846,0.9802216,0.000048346832,0.00007824221,0.0034136465],"study_design_scores_gemma":[0.0005221822,0.00038272396,0.008470427,0.0000040173018,0.00001421951,0.000033706136,0.000082800834,0.001453658,0.9871397,0.00022071591,0.001454249,0.00022159044],"about_ca_topic_score_codex":0.000011589172,"about_ca_topic_score_gemma":0.000006170912,"teacher_disagreement_score":0.0069505456,"about_ca_system_score_codex":0.0004399221,"about_ca_system_score_gemma":0.000057339457,"threshold_uncertainty_score":0.99995184},"labels":[],"label_agreement":null},{"id":"W2066227169","doi":"10.1016/j.jhazmat.2013.08.026","title":"Ex situ remediation of polluted soils by absorptive polymers, and a comparison of slurry and two-phase partitioning bioreactors for ultimate contaminant degradation","year":2013,"lang":"en","type":"article","venue":"Journal of Hazardous Materials","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Slurry; Bioreactor; Soil water; Environmental remediation; Chemistry; Biodegradation; Soil contamination; Polymer; Environmental chemistry; Contamination; Pulp and paper industry; Environmental engineering; Environmental science; Soil science; Organic chemistry","score_opus":0.012533572837161049,"score_gpt":0.2723837277407741,"score_spread":0.259850154903613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066227169","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99882317,0.00013582007,0.00021624687,0.00014507354,0.00016426817,0.00029560138,0.00019909217,0.0000037472564,0.000016990763],"genre_scores_gemma":[0.99878716,0.000083607294,0.001010884,0.000026313628,0.000028096088,0.0000021255926,0.00003417796,0.000007125069,0.000020522471],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988239,0.00007137637,0.00069311523,0.00010415655,0.00017905397,0.00012842065],"domain_scores_gemma":[0.9985816,0.000065504326,0.0011583465,0.000055269913,0.00006121704,0.00007809777],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040535914,0.00010345966,0.00034296725,0.00005592857,0.00004721532,0.000037590846,0.00005802718,0.00005791854,0.00034241824],"category_scores_gemma":[0.00008473248,0.00008013279,0.00003299206,0.00005710805,0.00012654865,0.00030908492,0.000025265936,0.000032793178,0.0000036593988],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016641899,0.000106329804,0.004854349,0.000025116073,0.000020677468,2.7380145e-7,0.0005644089,0.0000036844424,0.9897994,0.000006150874,0.0012708737,0.0031823232],"study_design_scores_gemma":[0.0019232865,0.00039870557,0.029638141,0.00005387653,0.00004658323,0.000007988071,0.00035208245,0.00014237288,0.967226,0.000028771292,0.0000939737,0.000088167304],"about_ca_topic_score_codex":0.00025852007,"about_ca_topic_score_gemma":0.00003522832,"teacher_disagreement_score":0.024783794,"about_ca_system_score_codex":0.00003952919,"about_ca_system_score_gemma":0.00001496909,"threshold_uncertainty_score":0.37492394},"labels":[],"label_agreement":null},{"id":"W2066299720","doi":"10.1080/10406638.2012.661828","title":"Pyrene Biodegradation by <i>Mycobacterium Frederiksbergense</i>Using an Encapsulated Oil System","year":2012,"lang":"en","type":"article","venue":"Polycyclic aromatic compounds","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Chemistry; Biodegradation; Pyrene; Environmental chemistry; Oil spill; Organic chemistry; Petroleum engineering","score_opus":0.016185656367359084,"score_gpt":0.22580329253970507,"score_spread":0.209617636172346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066299720","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942491,0.00009831147,0.0002740392,0.00009341771,0.0008541724,0.000107349166,0.000029823588,0.00020583835,0.004087915],"genre_scores_gemma":[0.99748945,0.00001377161,0.0015371239,0.0001808615,0.0001327954,0.0000044486683,0.00022362827,0.000027143378,0.00039076118],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998164,0.00014551535,0.00048273682,0.0002960446,0.00037096147,0.0005407482],"domain_scores_gemma":[0.999001,0.000028062108,0.0002466124,0.00038065008,0.0000032637881,0.00034037116],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033423406,0.00025678452,0.00024851045,0.000045135497,0.000245587,0.00007562055,0.00025147627,0.00012585206,0.0005887748],"category_scores_gemma":[0.000016000255,0.00023177051,0.00006415388,0.00031687538,0.00011584314,0.00057747227,0.00010069724,0.00009450634,0.0007353845],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009608318,0.00019644726,0.020019855,0.000014541379,0.000015276008,7.409495e-7,0.00044576058,0.000003921599,0.97397614,0.0000036851463,0.0033716974,0.0019423208],"study_design_scores_gemma":[0.00395508,0.00034193482,0.16272879,0.00032222705,0.0004279297,0.00056866684,0.002361576,0.057816483,0.6918891,0.00008645417,0.07557991,0.003921859],"about_ca_topic_score_codex":0.0008689968,"about_ca_topic_score_gemma":0.000045176686,"teacher_disagreement_score":0.28208706,"about_ca_system_score_codex":0.00033321683,"about_ca_system_score_gemma":0.000011731012,"threshold_uncertainty_score":0.9452126},"labels":[],"label_agreement":null},{"id":"W2067495756","doi":"10.1016/j.envpol.2012.12.020","title":"Assessing microbial carbon sources and potential PAH degradation using natural abundance 14C analysis","year":2013,"lang":"en","type":"article","venue":"Environmental Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Scarborough Hospital; University of Toronto; McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biodegradation; Environmental chemistry; Microbial population biology; Microbial biodegradation; Abundance (ecology); Environmental science; Carbon fibers; Organic matter; Dissolved organic carbon; Soil water; Total organic carbon; Chemistry; Ecology; Microorganism; Biology; Soil science; Bacteria","score_opus":0.006283344569310993,"score_gpt":0.20139616196651872,"score_spread":0.19511281739720773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067495756","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99877346,0.00008068678,0.00044636606,0.00016653014,0.0001724023,0.00020854652,0.000016235463,0.000028158895,0.00010764545],"genre_scores_gemma":[0.99806887,0.000028157394,0.0013396149,0.00019357193,0.000062443476,0.0000020035202,0.00008149585,0.000011454003,0.00021241941],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987684,0.000081789825,0.00024133407,0.00037415256,0.00026306426,0.0002712626],"domain_scores_gemma":[0.9996047,0.0000069791254,0.00015886532,0.00013370818,0.0000017153053,0.000094047195],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012113733,0.00017878719,0.00015362556,0.0000789676,0.00023146383,0.00016221355,0.0000938897,0.00009264118,0.001317435],"category_scores_gemma":[0.000006187229,0.00016806756,0.000075984,0.00023908124,0.0002569894,0.00070785696,0.00012628314,0.000114977534,0.00012403402],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000052878772,0.000038513237,0.07352009,0.0000015500375,0.000030307128,9.105136e-7,0.00008801884,0.0007834803,0.9219193,5.2466487e-7,0.000048434857,0.0035636022],"study_design_scores_gemma":[0.00032612387,0.000018112278,0.91692287,0.0000049987634,0.0001507473,0.000012687653,0.00025419157,0.029269274,0.052615292,0.000016899183,0.00013567861,0.00027311343],"about_ca_topic_score_codex":0.0010732795,"about_ca_topic_score_gemma":0.000074306365,"teacher_disagreement_score":0.869304,"about_ca_system_score_codex":0.0003304183,"about_ca_system_score_gemma":0.0000043326922,"threshold_uncertainty_score":0.9995955},"labels":[],"label_agreement":null},{"id":"W2068298793","doi":"10.1002/jctb.2373","title":"Degradation of hexahydro‐1,3,5‐trinitro‐1,3, 5‐triazine (RDX) by anaerobic mesophilic granular sludge from a UASB reactor","year":2010,"lang":"en","type":"article","venue":"Journal of Chemical Technology & Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina","funders":"","keywords":"Mesophile; Biodegradation; Anaerobic exercise; Chemistry; Degradation (telecommunications); Pulp and paper industry; Aqueous solution; Bioreactor; Chemical engineering; Waste management; Organic chemistry; Bacteria","score_opus":0.005026019002027063,"score_gpt":0.20660663131374943,"score_spread":0.20158061231172236,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068298793","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9894877,0.00024980467,0.0001391755,0.009294776,0.00034235025,0.00018458946,0.00007459655,0.00013388379,0.00009309665],"genre_scores_gemma":[0.99196315,0.0002698386,0.0074493415,0.00015875472,0.000065594715,0.000002567013,0.00003742019,0.000024798308,0.00002855105],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976352,0.000039322153,0.0010850136,0.00042537,0.0003850327,0.0004300539],"domain_scores_gemma":[0.99799246,0.000091975664,0.0011003724,0.000599486,0.00007428568,0.00014144467],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00038014384,0.00030263118,0.0006924221,0.00042600546,0.000040879546,0.000010993066,0.0011586808,0.0018907377,0.0014000617],"category_scores_gemma":[0.00069565384,0.00025458008,0.0001992425,0.0011194804,0.0013523529,0.00017524265,0.0003311446,0.001645126,0.00011421719],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000085323794,0.00026086433,0.0054102773,0.000003985614,0.000044899807,0.000016443624,0.00001163602,1.7065217e-7,0.9799795,0.00017071201,0.0040859845,0.009930167],"study_design_scores_gemma":[0.0011917944,0.00025008438,0.000532859,0.000016163613,0.00006019289,0.00012890025,0.000027695496,0.000016222964,0.9775733,0.002490213,0.017489659,0.00022296543],"about_ca_topic_score_codex":0.000044254615,"about_ca_topic_score_gemma":0.000020223048,"teacher_disagreement_score":0.013403674,"about_ca_system_score_codex":0.000105985484,"about_ca_system_score_gemma":0.00003727097,"threshold_uncertainty_score":0.99999064},"labels":[],"label_agreement":null},{"id":"W2068572911","doi":"10.3389/fmicb.2014.00197","title":"Conversion of crude oil to methane by a microbial consortium enriched from oil reservoir production waters","year":2014,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":114,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Canada","keywords":"Methanosaeta; Hydrocarbon; Enrichment culture; Petroleum; Methanogenesis; Biodegradation; Microbial population biology; Methane; Environmental chemistry; Microorganism; Microbial consortium; Chemistry; Bacteria; Biology; Organic chemistry","score_opus":0.005305847893290014,"score_gpt":0.1964902461721261,"score_spread":0.1911843982788361,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068572911","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956938,0.000053276864,0.0003499388,0.0012493244,0.002003281,0.000101332735,0.00014791475,0.000025413348,0.00037569366],"genre_scores_gemma":[0.98561174,0.0000895103,0.010587155,0.0008157902,0.000062638785,0.0000058659516,0.00035048084,0.000017507273,0.0024592902],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981511,0.000326662,0.00045966264,0.00058810477,0.000080627295,0.00039380978],"domain_scores_gemma":[0.9993558,0.00003694762,0.00018073527,0.00030348677,0.000020418987,0.00010260919],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005129734,0.00020083948,0.00038459818,0.000109880464,0.000042081007,0.000008010224,0.00036883864,0.00024198923,0.0006004755],"category_scores_gemma":[0.0001672767,0.00018228032,0.00006408505,0.00028743042,0.00034310017,0.000084304644,0.00019765102,0.00016110283,0.00028792734],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020690393,0.00006785345,0.031563595,0.000011701344,0.000013770086,5.297228e-7,0.00039358405,0.000024335865,0.8041969,3.1233432e-7,0.16191788,0.0016026245],"study_design_scores_gemma":[0.0008200288,0.00008450899,0.0022934433,0.000016343045,0.000013605898,0.000002678812,0.00013355444,0.0000131296,0.8862756,0.000013999777,0.110107504,0.0002256263],"about_ca_topic_score_codex":0.00070200115,"about_ca_topic_score_gemma":0.0001954911,"teacher_disagreement_score":0.082078665,"about_ca_system_score_codex":0.00021312674,"about_ca_system_score_gemma":0.000016423744,"threshold_uncertainty_score":0.74331754},"labels":[],"label_agreement":null},{"id":"W2068614408","doi":"10.1080/10889860701866289","title":"Biodegradation of Residual Dense Nonaqueous-Phase Liquid Tetrachloroethene: Effects on Mass Transfer","year":2008,"lang":"en","type":"article","venue":"Bioremediation Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Strategic Environmental Research and Development Program","keywords":"Environmental remediation; Reductive dechlorination; Effluent; Chemistry; Environmental chemistry; Biodegradation; Saturation (graph theory); Groundwater; Mass transfer; Contamination; Chromatography; Environmental science; Environmental engineering; Geology; Ecology; Organic chemistry; Geotechnical engineering","score_opus":0.014868868955105238,"score_gpt":0.23577171339597622,"score_spread":0.220902844440871,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068614408","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99646086,0.000037869824,0.0016586503,0.0006297258,0.0005412527,0.00022541659,0.000032893917,0.000030714476,0.00038264043],"genre_scores_gemma":[0.99781024,0.00032867552,0.0010110467,0.00034658713,0.00032734353,0.0000026150806,0.00003532306,0.000016962756,0.00012119621],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980667,0.00016787557,0.0005200103,0.00023479259,0.0007408296,0.00026976512],"domain_scores_gemma":[0.9992486,0.00011239298,0.00020275096,0.00016766769,0.00005188603,0.0002166818],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000473062,0.00018859374,0.00019983202,0.00014316519,0.00021429562,0.000019935644,0.0002004268,0.0001493292,0.0011552456],"category_scores_gemma":[0.00018192852,0.0001539023,0.0001071868,0.00030478303,0.000161383,0.00025138233,0.00001609457,0.0002465139,0.00034167696],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052461954,0.00030973193,0.0063438513,0.000009128724,0.000016984632,0.000043303047,0.0005543173,0.00006169544,0.9806137,0.000012087613,0.0052194246,0.0062911604],"study_design_scores_gemma":[0.0028898045,0.0012554079,0.022689955,0.000026255173,0.00002483114,0.000090265516,0.000030375817,0.00009946529,0.96958286,0.00003115916,0.003051616,0.0002280069],"about_ca_topic_score_codex":0.000009082943,"about_ca_topic_score_gemma":0.00001149945,"teacher_disagreement_score":0.016346104,"about_ca_system_score_codex":0.00015704302,"about_ca_system_score_gemma":0.000058283378,"threshold_uncertainty_score":0.9997578},"labels":[],"label_agreement":null},{"id":"W2068854008","doi":"10.1016/j.procbio.2010.05.033","title":"Structure, properties and applications of rhamnolipids produced by Pseudomonas aeruginosa L2-1 from cassava wastewater","year":2010,"lang":"en","type":"article","venue":"Process Biochemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":174,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Rhamnolipid; Micrococcus luteus; Bacillus cereus; Critical micelle concentration; Chemistry; Wastewater; Bioremediation; Food science; Chromatography; Micrococcus; Pseudomonas aeruginosa; Contamination; Microbiology; Micelle; Bacteria; Organic chemistry; Aqueous solution; Biology; Biochemistry; Escherichia coli; Environmental engineering; Environmental science","score_opus":0.0056152723711855946,"score_gpt":0.19605484278069585,"score_spread":0.19043957040951026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068854008","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989476,0.000082680184,0.000004698688,0.00015617399,0.000041096988,0.00019562112,0.0002248565,0.00002691145,0.0003203293],"genre_scores_gemma":[0.9992487,0.000012687781,0.0002442841,0.00005271272,0.00007627243,0.00001607779,0.00007018117,0.000009573309,0.00026951559],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99912137,0.0000058723213,0.00018425366,0.00035508574,0.00017866361,0.0001547284],"domain_scores_gemma":[0.999563,0.000006398182,0.000101789825,0.00023084605,0.000023134848,0.00007483541],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000048784645,0.00013665172,0.00011711076,0.00000900984,0.000060560258,0.000025031974,0.00020705516,0.00012877268,0.00078532664],"category_scores_gemma":[0.00002873517,0.00010471706,0.000017625945,0.000105499734,0.000281648,0.00007544789,0.00008994951,0.0001416831,0.000021127058],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010957092,0.00004059318,0.016032625,0.000058629328,0.0000056555677,1.17467984e-7,0.00014397055,4.4058342e-7,0.9819301,5.9779114e-7,0.00063110015,0.0011452662],"study_design_scores_gemma":[0.00016519884,0.000006333356,0.0006475465,0.000007239337,0.000009437058,0.000003165122,0.000060580503,0.000013743848,0.9976974,0.00007555394,0.0011662486,0.0001475228],"about_ca_topic_score_codex":0.000091412796,"about_ca_topic_score_gemma":0.000020717498,"teacher_disagreement_score":0.015767382,"about_ca_system_score_codex":0.000013913743,"about_ca_system_score_gemma":0.00001881978,"threshold_uncertainty_score":0.85987765},"labels":[],"label_agreement":null},{"id":"W2069753871","doi":"10.1080/15320383.2011.560981","title":"Isolation and Characterization of Biosurfactant-and Bioemulsifier-Producing Bacteria from Petroleum Contaminated Sites in Western Canada","year":2011,"lang":"en","type":"article","venue":"Soil and Sediment Contamination An International Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Regina","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Isolation (microbiology); Bacteria; Contamination; Petroleum; Microbiology; Chemistry; Food science; Biology; Ecology; Organic chemistry","score_opus":0.013083083651648807,"score_gpt":0.20684938859599752,"score_spread":0.1937663049443487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069753871","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99898773,0.000014777988,0.00012227304,0.00029463903,0.00033303574,0.00008206295,0.00006546971,0.000006185721,0.00009382793],"genre_scores_gemma":[0.999151,0.00020286703,0.00017810971,0.00020648708,0.000045064175,0.0000011028185,0.00013238107,0.000006502225,0.00007646624],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99893063,0.00008641737,0.00037256206,0.00022419606,0.00027147224,0.00011469685],"domain_scores_gemma":[0.99947697,0.000023464872,0.00027853134,0.000058815804,0.00006292217,0.00009927543],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027772196,0.00011960987,0.00013857157,0.00009490385,0.0000604095,0.00006519656,0.00009886355,0.000057807025,0.0004820838],"category_scores_gemma":[0.000026183048,0.00011023695,0.000012340975,0.0000561465,0.00007377767,0.000610994,0.000061595805,0.00009785104,0.0000018728227],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005505875,0.000035595003,0.55897284,0.000001908266,0.000013653881,0.0000046979158,0.0014093764,7.7044064e-7,0.43443096,0.000009291943,0.0000043797118,0.005061498],"study_design_scores_gemma":[0.0008564658,0.000078808494,0.96127826,0.000030196163,0.000010065049,0.00001580548,0.0002730462,0.0015736782,0.03559799,0.000029087503,0.00013831988,0.000118274984],"about_ca_topic_score_codex":0.037353333,"about_ca_topic_score_gemma":0.09708889,"teacher_disagreement_score":0.40230542,"about_ca_system_score_codex":0.00013204174,"about_ca_system_score_gemma":0.000030802108,"threshold_uncertainty_score":0.969057},"labels":[],"label_agreement":null},{"id":"W2070194481","doi":"10.1007/s00253-002-1073-x","title":"Enhanced transformation of polycyclic aromatic hydrocarbons using a combined Fenton's reagent, microbial treatment and surfactants","year":2002,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":79,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Anthracene; Chemistry; Pyrene; Reagent; Biodegradation; Fenton's reagent; Aqueous solution; Pulmonary surfactant; Environmental chemistry; Biotransformation; Organic chemistry; Nuclear chemistry; Fenton reaction; Hydrogen peroxide","score_opus":0.011833880451942941,"score_gpt":0.19945844745751146,"score_spread":0.1876245670055685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070194481","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981278,0.00010886307,0.00015830896,0.0004658992,0.00006378767,0.00040317452,0.000026870965,0.000056641315,0.00058866467],"genre_scores_gemma":[0.99840647,0.0006290826,0.00074210326,0.00012926092,0.0000058107294,0.0000043122986,0.000028246453,0.000009468815,0.00004524372],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989322,0.000037487822,0.00034730893,0.00035169043,0.000028374594,0.0003029626],"domain_scores_gemma":[0.9995686,0.000030148653,0.00017482867,0.00017187503,0.0000010476535,0.000053534408],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008427897,0.00021801071,0.0003279031,0.00009668488,0.00011564817,0.0000075857997,0.0001111794,0.00045917046,0.00013159706],"category_scores_gemma":[0.0000063485645,0.0001810478,0.00003728084,0.00019940277,0.00072290894,0.000047323578,0.000067814595,0.00010921213,0.00004867661],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051695395,0.00012154528,0.0004246358,0.000005369559,0.000032787957,8.739377e-7,0.00045268805,5.7718603e-7,0.99022764,0.000058698755,0.000029652381,0.008593833],"study_design_scores_gemma":[0.0014592237,0.0002624956,0.0005993654,0.000008757914,0.000045647663,0.000067772286,0.00010420362,0.00013704733,0.99628884,0.00013597507,0.0006902118,0.00020045474],"about_ca_topic_score_codex":0.000095303156,"about_ca_topic_score_gemma":0.00019299545,"teacher_disagreement_score":0.008393378,"about_ca_system_score_codex":0.00006742926,"about_ca_system_score_gemma":0.0000051749385,"threshold_uncertainty_score":0.7382915},"labels":[],"label_agreement":null},{"id":"W2070413985","doi":"10.1021/es903806p","title":"Two-Phase Partitioning Bioreactors Operating with Polymers Applied to the Removal of Substituted Phenols","year":2010,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Bioreactor; Polymer; Biodegradation; Chemistry; Degradation (telecommunications); Chemical engineering; Substrate (aquarium); Polymer degradation; Phase (matter); Oxygen; Aqueous solution; Chemical oxygen demand; Chromatography; Batch reactor; Wastewater; Organic chemistry; Waste management; Catalysis","score_opus":0.005011230563069537,"score_gpt":0.2220744819835509,"score_spread":0.21706325142048136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070413985","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946388,0.0000081044545,0.00012930471,0.0008063912,0.00012510599,0.00036729185,0.000019008698,0.000056176126,0.003849831],"genre_scores_gemma":[0.99526733,0.0000032877376,0.0044285553,0.00020783528,0.000019346544,0.00001424636,0.000005928316,0.0000091695065,0.000044308264],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984535,0.000011069282,0.00022955792,0.00045657106,0.00043223856,0.00041705818],"domain_scores_gemma":[0.99931693,0.000013779978,0.00012479098,0.0004127619,0.000003101451,0.00012863414],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00037316448,0.00015543892,0.00013223475,0.0001382361,0.00042604737,0.000032874916,0.0007090826,0.000077160286,0.0018774499],"category_scores_gemma":[0.000036086778,0.00010219228,0.000022080027,0.0012498097,0.0031680511,0.00018142429,0.00034350663,0.0002353829,0.00033143663],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012518747,0.00008865963,0.00986492,3.5019298e-7,0.0000023863886,0.0000038517246,0.00021365308,0.00021178843,0.9719648,0.0005709483,0.000014953732,0.017051183],"study_design_scores_gemma":[0.00057209097,0.000117016665,0.011731969,0.0000046025807,0.000008236072,0.000066069784,0.0007236998,0.00012053137,0.98110455,0.000018380018,0.0053391927,0.00019367263],"about_ca_topic_score_codex":0.000084009735,"about_ca_topic_score_gemma":0.00023679477,"teacher_disagreement_score":0.01685751,"about_ca_system_score_codex":0.00011471631,"about_ca_system_score_gemma":0.00002500589,"threshold_uncertainty_score":0.99954474},"labels":[],"label_agreement":null},{"id":"W2070496453","doi":"10.1016/j.chemosphere.2005.02.061","title":"Effects of surfactant and temperature on biotransformation kinetics of anthracene and pyrene","year":2005,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":89,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; National Research Council Canada; Université du Québec à Montréal","funders":"","keywords":"Pyrene; Anthracene; Biotransformation; Chemistry; Mineralization (soil science); Environmental chemistry; Pulmonary surfactant; Phenanthrene; Bioremediation; Biodegradation; Organic chemistry; Contamination; Biochemistry","score_opus":0.002302463910027284,"score_gpt":0.17891252248366588,"score_spread":0.1766100585736386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070496453","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99860585,0.00017958015,0.0000040223777,0.0002445104,0.000022603057,0.00012351149,0.000010250437,0.0000067557216,0.00080289034],"genre_scores_gemma":[0.99867576,0.00042302327,0.00074205117,0.00008118866,0.00000872438,3.3836037e-7,0.0000039050287,0.000004052396,0.00006097873],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995717,0.000009736981,0.0001350701,0.00010372143,0.00010338298,0.00007643595],"domain_scores_gemma":[0.9998036,0.000023464714,0.000061026454,0.00006383994,0.0000065346558,0.000041558495],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000042598735,0.00007562766,0.00010681684,0.000004182873,0.000015035451,0.0000053408157,0.000038397586,0.000070591486,0.00027707155],"category_scores_gemma":[0.00001353108,0.000058936308,0.000013666655,0.000075816126,0.00011363411,0.00006457323,0.000019912071,0.00004336876,0.000008055275],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021178,0.00006370693,0.0035298024,0.000064208056,0.0000030468868,2.2153982e-7,0.00020054376,0.000016862681,0.98097605,0.000004682726,0.00028022623,0.01483948],"study_design_scores_gemma":[0.00036881864,0.000080842925,0.11279816,0.000027388962,0.000006357219,0.0000010869048,0.00001944497,0.000069449015,0.88578916,0.0000047869944,0.00077669596,0.0000578105],"about_ca_topic_score_codex":0.000012355382,"about_ca_topic_score_gemma":0.000023348428,"teacher_disagreement_score":0.10926836,"about_ca_system_score_codex":0.00001614076,"about_ca_system_score_gemma":0.000001981083,"threshold_uncertainty_score":0.30337393},"labels":[],"label_agreement":null},{"id":"W2070542897","doi":"10.1016/s0043-1354(02)00491-8","title":"Biokinetic modeling of in situ bioremediation of BTX compounds—impact of process variables and scaleup implications","year":2003,"lang":"en","type":"article","venue":"Water Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"King Fahd University of Petroleum and Minerals","keywords":"Biodegradation; Microcosm; Toluene; Benzene; Hydrogen peroxide; Chemistry; Bioremediation; Environmental chemistry; Xylene; Bioreactor; Degradation (telecommunications); Environmental engineering; Environmental science; Organic chemistry; Contamination; Ecology","score_opus":0.05363839534594142,"score_gpt":0.34051993519278234,"score_spread":0.28688153984684095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070542897","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983008,0.000016039323,0.000048245984,0.00006132746,0.0000073990473,0.00019958819,0.00001475172,0.0000021104147,0.0013497303],"genre_scores_gemma":[0.9997035,0.000037456448,0.0002184308,0.000002419985,0.0000028583688,0.000003370848,0.00001040635,0.0000042376478,0.000017286784],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990371,0.00010019796,0.00026513325,0.00014573097,0.00026055422,0.00019130984],"domain_scores_gemma":[0.99969673,0.000021521264,0.000042946005,0.00013093984,0.000060501407,0.000047368005],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072445534,0.000054919965,0.00012010249,0.00012959521,0.000026562331,0.000006642122,0.000114384544,0.000051197112,0.00023015222],"category_scores_gemma":[0.00006989905,0.000037488055,0.000020625022,0.00036772006,0.00020465294,0.00007755792,0.000053243777,0.00007294875,0.000010470721],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012948477,0.00008105079,0.18615733,0.000027577351,0.0000029064438,7.069056e-8,0.0005319981,0.001196204,0.8118109,0.00001651462,0.000022211096,0.00014028497],"study_design_scores_gemma":[0.00038044364,0.00009819111,0.12490396,0.000025518535,0.0000028418483,0.0000011148827,0.000104311366,0.004470253,0.8689083,0.0010292946,0.0000121420735,0.000063633204],"about_ca_topic_score_codex":0.0005707517,"about_ca_topic_score_gemma":0.00012612737,"teacher_disagreement_score":0.061253365,"about_ca_system_score_codex":0.000053422424,"about_ca_system_score_gemma":0.000024769697,"threshold_uncertainty_score":0.25200054},"labels":[],"label_agreement":null},{"id":"W2070658231","doi":"10.1007/s10295-004-0186-x","title":"Biodegradation of chlorinated alkanes and their commercial mixtures by Pseudomonas sp. strain 273","year":2004,"lang":"en","type":"article","venue":"Journal of Industrial Microbiology & Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Queen's University; McGill University; Georgia Institute of Technology","keywords":"Halogenation; Biodegradation; Chemistry; Chlorine; Dehalogenase; Halocarbon; Pseudomonas; Alkane; Organic chemistry; Environmental chemistry; Halogen; Strain (injury); Hydrocarbon; Bacteria; Alkyl; Biology","score_opus":0.013578532255567459,"score_gpt":0.20873109253472324,"score_spread":0.19515256027915578,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070658231","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99122274,0.00023273312,0.00010291397,0.0075169266,0.00046191865,0.0001624455,0.0002551199,0.000019082718,0.000026138856],"genre_scores_gemma":[0.99889123,0.0003079394,0.00041334302,0.00024308902,0.000080426194,4.822196e-7,0.00004189401,0.000008896406,0.000012694954],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986954,0.000093764225,0.0006670248,0.00021625105,0.000062136394,0.0002654447],"domain_scores_gemma":[0.9989795,0.000050944214,0.0007249407,0.00014089474,0.000034520348,0.00006921335],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042012596,0.00020525476,0.00043431378,0.00016588123,0.00007176208,0.000010364982,0.00035601284,0.0010455741,0.00022414072],"category_scores_gemma":[0.00014600242,0.00014755424,0.0000878754,0.00031339034,0.0009786019,0.000101128506,0.00013464499,0.00057158,0.000014490397],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016761609,0.00012369044,0.0029529682,0.0000018165416,0.000043404958,0.000005187027,0.00007550546,0.0000054218594,0.97623116,0.000048985974,0.004099928,0.01624433],"study_design_scores_gemma":[0.0022318517,0.00069389446,0.0007567508,0.000022765831,0.000021078535,0.00035637728,0.00012204403,5.642983e-7,0.97983056,0.00024371379,0.015573641,0.0001467531],"about_ca_topic_score_codex":0.00013978909,"about_ca_topic_score_gemma":0.00008007937,"teacher_disagreement_score":0.016097575,"about_ca_system_score_codex":0.00011305703,"about_ca_system_score_gemma":0.000052597257,"threshold_uncertainty_score":0.80644244},"labels":[],"label_agreement":null},{"id":"W2070829796","doi":"10.1016/j.chemosphere.2005.08.076","title":"Biphenyl degradation kinetics by Burkholderia xenovorans LB400 in two-phase partitioning bioreactors","year":2005,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biphenyl; Chemistry; Biodegradation; Aqueous solution; Burkholderia; Bioreactor; Kinetics; Aqueous two-phase system; Solvent; Substrate (aquarium); Chromatography; Organic chemistry; Nuclear chemistry; Bacteria","score_opus":0.009639092971234105,"score_gpt":0.2580525598298462,"score_spread":0.2484134668586121,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070829796","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945685,0.00006617516,0.00010762469,0.0007221842,0.00008016223,0.00015517164,0.000031265285,0.00004832478,0.0042205728],"genre_scores_gemma":[0.9969728,0.000035537963,0.0017159187,0.00043938504,0.000052250627,0.0000042029114,0.00013115203,0.000014169445,0.0006346048],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99900407,0.000022788756,0.00026185828,0.00027335642,0.00017897485,0.00025897723],"domain_scores_gemma":[0.9996287,0.00001411377,0.00008313439,0.00016387615,0.0000070878755,0.00010304395],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010661188,0.00014351288,0.00011561737,0.000008591419,0.000049832022,0.000040689414,0.00013981499,0.0000702053,0.009350418],"category_scores_gemma":[0.000023531426,0.00013701722,0.000033401204,0.0003031882,0.00009073881,0.00021934827,0.000040889016,0.00010266756,0.0007273655],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014864227,0.00030149467,0.023389407,0.0000033151591,0.0000026196037,0.000001212947,0.00020521267,0.00016920826,0.92556894,0.000007948565,0.015133441,0.035202324],"study_design_scores_gemma":[0.0018850565,0.000042760927,0.006713962,0.00001864892,0.000008061346,0.0000023063797,0.00011529215,0.0009986537,0.91114885,0.000019708745,0.07876102,0.0002856788],"about_ca_topic_score_codex":0.0002498938,"about_ca_topic_score_gemma":0.0013607234,"teacher_disagreement_score":0.06362758,"about_ca_system_score_codex":0.0001962922,"about_ca_system_score_gemma":0.000007867773,"threshold_uncertainty_score":0.99155515},"labels":[],"label_agreement":null},{"id":"W2070851743","doi":"10.1139/s08-033","title":"Environmental innocuousness of the activation of a microbial consortium from creosote-contaminated soil in a slurry bioreactor","year":2008,"lang":"en","type":"article","venue":"Journal of Environmental Engineering and Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Polytechnique Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Creosote; Bioaugmentation; Biodegradation; Phenanthrene; Environmental chemistry; Soil contamination; Microcosm; Biostimulation; Bioremediation; Contamination; Chemistry; Temperature gradient gel electrophoresis; Environmental science; Soil water; Ecology; Biology; Soil science","score_opus":0.0045827961063908485,"score_gpt":0.1605158543987059,"score_spread":0.15593305829231505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070851743","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99960905,0.000038548224,0.000031381416,0.00003555669,0.00013313041,0.00008383016,0.000039726252,0.000002127451,0.000026658043],"genre_scores_gemma":[0.9995362,0.00009836144,0.0003001454,0.000024881589,0.000015595404,3.6930987e-7,0.0000011503,0.000005941736,0.000017337692],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987868,0.00002430771,0.00045783518,0.00015817727,0.0004101978,0.00016266451],"domain_scores_gemma":[0.9994046,0.00004146829,0.00035232192,0.00012478778,0.000003092495,0.000073710304],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027637032,0.000117275136,0.0002015515,0.000090814276,0.000064530854,0.000006607936,0.0002789379,0.00005562697,0.00018076462],"category_scores_gemma":[0.000050852468,0.00008675907,0.00005386495,0.00024123362,0.0008654751,0.0002989075,0.0001475221,0.0001578127,0.0000028757413],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025113388,0.00010525995,0.12533216,0.0000027134251,0.000004066184,0.0000024697254,0.0006441701,0.0010278167,0.87239367,7.0408663e-7,0.00000958468,0.00045226704],"study_design_scores_gemma":[0.00035718924,0.000043847806,0.5785131,0.000025279449,0.0000044535927,0.000024105144,0.000083216175,0.0004425753,0.42038006,0.0000015753168,0.00006370714,0.000060912615],"about_ca_topic_score_codex":0.000093674345,"about_ca_topic_score_gemma":0.000005354966,"teacher_disagreement_score":0.4531809,"about_ca_system_score_codex":0.0001770507,"about_ca_system_score_gemma":0.000025661797,"threshold_uncertainty_score":0.35379323},"labels":[],"label_agreement":null},{"id":"W2070913630","doi":"10.1007/s11270-012-1411-2","title":"Assessing Limitations for PAH Biodegradation in Long-Term Contaminated Soils Using Bioaccessibility Assays","year":2013,"lang":"en","type":"article","venue":"Water Air & Soil Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bioavailability; Biodegradation; Environmental chemistry; Soil water; Soil contamination; Chemistry; Pyrene; Bioremediation; Soil Pollutants; Contamination; Environmental science; Soil science; Organic chemistry; Biology; Ecology","score_opus":0.047826722769964726,"score_gpt":0.28255629919979947,"score_spread":0.23472957642983475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070913630","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918828,0.000007339849,0.0062071187,0.00075734354,0.00023466093,0.00064293406,0.000024634623,0.000048379065,0.00019477322],"genre_scores_gemma":[0.9981083,0.0000058361297,0.0011898932,0.00027583333,0.000033640263,0.000024850293,0.00024102119,0.000012369074,0.00010822264],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99859965,0.00011336785,0.0003868349,0.0003540359,0.00017684138,0.0003692587],"domain_scores_gemma":[0.999594,0.000026008674,0.00009800959,0.00017034198,0.00003547207,0.00007619196],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004134852,0.00015883912,0.00014569379,0.00008740411,0.00018849029,0.00014798561,0.00012602564,0.00013478602,0.00040128003],"category_scores_gemma":[0.000050331455,0.0001216566,0.000059563772,0.00022165714,0.00012209102,0.0014205643,0.00006576024,0.00008493958,0.00031008304],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009966923,0.00012187105,0.11950194,0.000014088871,0.0000049574264,5.607869e-7,0.00030301165,0.000577511,0.85896516,0.0000029772866,0.0001534647,0.020344462],"study_design_scores_gemma":[0.00053910003,0.000024927851,0.7831533,0.000024396179,0.000012393641,0.0000015255365,0.00008179663,0.015806902,0.20002425,0.00012268256,0.000026227764,0.00018251674],"about_ca_topic_score_codex":0.0016711289,"about_ca_topic_score_gemma":0.0022782483,"teacher_disagreement_score":0.66365135,"about_ca_system_score_codex":0.00043920364,"about_ca_system_score_gemma":0.000019554709,"threshold_uncertainty_score":0.49610123},"labels":[],"label_agreement":null},{"id":"W2072197580","doi":"10.1016/j.chemosphere.2010.03.055","title":"Biodegradation of semi- and non-volatile petroleum hydrocarbons in aged, contaminated soils from a sub-Arctic site: Laboratory pilot-scale experiments at site temperatures","year":2010,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":91,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Aboriginal Affairs Northern Dev Canada; McGill University","funders":"","keywords":"Biodegradation; Environmental science; Contamination; Petroleum; Environmental chemistry; Soil water; Soil contamination; Arctic; Volatile organic compound; Waste management; Oil spill; Environmental engineering; Chemistry; Soil science; Ecology; Engineering; Biology","score_opus":0.003845175095194916,"score_gpt":0.1923476404518621,"score_spread":0.18850246535666718,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072197580","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99904835,0.00009238452,0.0000019096142,0.000051501687,0.000113091504,0.00017909646,0.000116387564,0.000021293989,0.00037598095],"genre_scores_gemma":[0.99913406,0.00002623626,0.00027939348,0.00012377767,0.000019035833,0.0000064593387,0.0001466764,0.0000139708245,0.00025041393],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99900186,0.000033102606,0.0002454086,0.0003373789,0.00018760975,0.00019463037],"domain_scores_gemma":[0.99950516,0.000033878638,0.00012465932,0.00022404897,0.000008343657,0.00010391576],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000109064364,0.00016748592,0.00019459688,0.00001282391,0.00006331752,0.000025718946,0.000108291155,0.00012814948,0.0011578589],"category_scores_gemma":[0.00002492872,0.00015388185,0.00002554828,0.00020437455,0.00017084464,0.00016281281,0.0001089105,0.00019067708,0.00010631713],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003690663,0.00006724593,0.38299915,0.00000484116,0.0000033172694,0.000001995491,0.00043180623,0.000001060519,0.61581063,7.575543e-8,0.0005869048,0.000056044955],"study_design_scores_gemma":[0.0007045031,0.000034152476,0.34612876,0.00001633741,0.0000061928026,6.8057903e-7,0.00006753414,0.00039461293,0.65234995,0.0000042316924,0.0001711002,0.00012195042],"about_ca_topic_score_codex":0.0013958825,"about_ca_topic_score_gemma":0.00891385,"teacher_disagreement_score":0.036870383,"about_ca_system_score_codex":0.00010157333,"about_ca_system_score_gemma":0.00001709843,"threshold_uncertainty_score":0.9997552},"labels":[],"label_agreement":null},{"id":"W2072200856","doi":"10.1007/s10532-005-4217-8","title":"Pyrene mineralization capacity increases with compost maturity","year":2005,"lang":"en","type":"article","venue":"Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Polytechnique Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Mineralization (soil science); Pyrene; Compost; Chemistry; Environmental chemistry; Microcosm; Benzo(a)pyrene; Organic chemistry; Agronomy; Nitrogen; Biology","score_opus":0.011461909757528808,"score_gpt":0.19332972136249296,"score_spread":0.18186781160496415,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072200856","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99575675,0.000012792538,0.00048712676,0.00051690027,0.000033425276,0.00013359524,0.000034957433,0.000060853818,0.002963603],"genre_scores_gemma":[0.9935024,0.000023019293,0.00550367,0.0003937831,0.000053672065,0.0000019614226,0.0002463393,0.0000055362802,0.00026962155],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993624,0.000033642595,0.00012502115,0.0001719783,0.00019090837,0.00011607016],"domain_scores_gemma":[0.999731,0.000008738558,0.00007197297,0.000116141775,0.000012595661,0.000059561746],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008990589,0.00009137706,0.000066645465,0.000013550785,0.00007936994,0.000030281055,0.000074861084,0.00004787799,0.0020758172],"category_scores_gemma":[0.000012889517,0.00006977244,0.000015887896,0.00013803445,0.000069041365,0.00035890835,0.00002394642,0.00003339541,0.00039708367],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009028634,0.00037603852,0.272429,0.000008405838,0.00001060456,8.225081e-7,0.00020199422,0.00021507572,0.6918047,0.00030280935,0.019784361,0.014775943],"study_design_scores_gemma":[0.0008835866,0.00010011973,0.70707965,0.000016603368,0.000022929302,0.000013875196,0.000036958863,0.0029479635,0.21480061,0.000030166275,0.07367394,0.00039362247],"about_ca_topic_score_codex":0.0024603247,"about_ca_topic_score_gemma":0.010437051,"teacher_disagreement_score":0.47700408,"about_ca_system_score_codex":0.00014600546,"about_ca_system_score_gemma":0.000005714388,"threshold_uncertainty_score":0.9988364},"labels":[],"label_agreement":null},{"id":"W2072410969","doi":"10.1021/es015796w","title":"Phenanthrene Sorption by Aliphatic-Rich Natural Organic Matter","year":2002,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":286,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; National Science Foundation","keywords":"Phenanthrene; Sorption; Chemistry; Kerogen; Environmental chemistry; Organic matter; Sedimentary organic matter; Lignin; Total organic carbon; Cellulose; Humic acid; Organic chemistry; Adsorption","score_opus":0.0034554297924176405,"score_gpt":0.1761506953891989,"score_spread":0.17269526559678125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072410969","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99395764,0.0001474626,0.00006515583,0.0025797423,0.00025650967,0.00020461786,0.000014232897,0.000110542154,0.0026640985],"genre_scores_gemma":[0.99572724,0.00011388018,0.0003394798,0.0008450356,0.000016613081,0.000006852813,0.000009769356,0.000013868802,0.0029272493],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99798995,0.000020252952,0.00024376702,0.0006339573,0.0005067551,0.00060532836],"domain_scores_gemma":[0.99938494,0.000008723401,0.00011288031,0.00037056254,0.000001957702,0.00012094515],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00018456714,0.00020387689,0.0001417662,0.00014605946,0.0003446586,0.000043580647,0.0007336314,0.0001386886,0.06391979],"category_scores_gemma":[0.00001954136,0.00017359166,0.000032705975,0.0010479351,0.00237755,0.00044577164,0.00047813,0.00019561253,0.023452332],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000016682077,0.00011409072,0.054596025,5.697204e-7,0.0000019254205,0.0000020945874,0.00007545703,0.0000025982954,0.9304557,0.0000064231062,0.008484157,0.006259278],"study_design_scores_gemma":[0.00045667653,0.0000986228,0.032488387,0.0000046543037,0.000010975796,0.00005542615,0.00019406005,0.00075086486,0.9393448,0.00014595191,0.025989518,0.0004600637],"about_ca_topic_score_codex":0.000012963081,"about_ca_topic_score_gemma":0.00001278264,"teacher_disagreement_score":0.040467456,"about_ca_system_score_codex":0.0005459921,"about_ca_system_score_gemma":0.0000036865224,"threshold_uncertainty_score":0.97730803},"labels":[],"label_agreement":null},{"id":"W2072642442","doi":"10.1139/w03-068","title":"Influence of peanut oil on microbial degradation of polycyclic aromatic hydrocarbons","year":2003,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Biodegradation; Chemistry; Environmental chemistry; Microbial biodegradation; Degradation (telecommunications); Polycyclic aromatic hydrocarbon; Cometabolism; Peanut oil; Microorganism; Organic chemistry; Bioremediation; Contamination; Bacteria; Biology","score_opus":0.007328234442494996,"score_gpt":0.18959679144629327,"score_spread":0.18226855700379826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072642442","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981787,0.0000702919,0.0000056655754,0.00016533928,0.00018143123,0.0000414983,0.000027931334,0.0000016101502,0.0013275023],"genre_scores_gemma":[0.99908495,0.000023731442,0.00034797488,0.00030354975,0.000012135374,1.7268839e-7,0.0000069248586,0.000006792099,0.00021374568],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988886,0.00014412391,0.0005481124,0.00012019808,0.000057113364,0.00024181338],"domain_scores_gemma":[0.9990602,0.000050398245,0.00053310534,0.00014005636,0.000009062768,0.00020718754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031006,0.00011683272,0.00025432775,0.00017049669,0.000043319204,0.000005097693,0.00025505936,0.00011630264,0.00025906865],"category_scores_gemma":[0.00020604109,0.00010140868,0.00008731212,0.0002054969,0.00035183204,0.00006707634,0.000009064273,0.00013987625,0.00005891296],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001425158,0.000026013839,0.014824833,0.000004189431,0.000015433649,0.0000070833357,0.00015844319,0.00011430888,0.9830487,0.000016733853,0.0013199573,0.00045004502],"study_design_scores_gemma":[0.0008896851,0.00040197425,0.026264217,0.00010430608,0.000036850564,0.00039048318,0.000079886246,0.0000026414227,0.9558683,0.00010554259,0.01564388,0.0002122151],"about_ca_topic_score_codex":0.0015665665,"about_ca_topic_score_gemma":0.009415554,"teacher_disagreement_score":0.027180389,"about_ca_system_score_codex":0.00015192456,"about_ca_system_score_gemma":0.00026823062,"threshold_uncertainty_score":0.52541},"labels":[],"label_agreement":null},{"id":"W2072988472","doi":"10.1007/s00284-005-0194-8","title":"Cometabolic Degradation of Polychlorinated Biphenyls at Low Temperature by Psychrotolerant Bacterium Hydrogenophaga sp. IA3-A","year":2006,"lang":"en","type":"article","venue":"Current Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":63,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Biphenyl; Bacteria; Polychlorinated biphenyl; Metabolite; Cometabolism; Chemistry; Congener; Nitrate; Environmental chemistry; Biotransformation; Biodegradation; Chlorine; Enrichment culture; Chromatography; Food science; Bioremediation; Organic chemistry; Biochemistry; Biology; Enzyme","score_opus":0.0057919672573446,"score_gpt":0.20845539624014717,"score_spread":0.20266342898280257,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072988472","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967879,0.0009291916,0.000008587597,0.00012529748,0.000974119,0.00038196298,0.0006381465,0.000040955136,0.00011382729],"genre_scores_gemma":[0.99712795,0.00012645846,0.00006279335,0.00011903811,0.00006266581,0.0000071435884,0.0018026767,0.000015982348,0.0006752646],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99853665,0.00009799635,0.0004640394,0.0004320971,0.000086490996,0.000382743],"domain_scores_gemma":[0.9993768,0.00002130237,0.00025655839,0.00024895268,0.000022407396,0.00007401978],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00011971046,0.00024900472,0.00031584085,0.00006212687,0.00010189201,0.000013862348,0.00026650444,0.00018741102,0.00292245],"category_scores_gemma":[0.0000094074385,0.00020845557,0.000095999545,0.0003457573,0.00030626275,0.00008550842,0.00013618643,0.00014659223,0.00071167835],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044056946,0.0002382851,0.025328964,0.000016448086,0.000008340582,8.9558e-7,0.000023923902,0.0000048863603,0.9388337,0.000006379075,0.03495734,0.0005367516],"study_design_scores_gemma":[0.00070215703,0.00004720481,0.017425356,0.00001456206,0.000013227984,0.00002265377,0.0000033189056,0.000006513722,0.8775365,0.0000043164055,0.10399894,0.00022526919],"about_ca_topic_score_codex":0.0000882928,"about_ca_topic_score_gemma":0.00008244734,"teacher_disagreement_score":0.069041595,"about_ca_system_score_codex":0.00013922388,"about_ca_system_score_gemma":0.000013891208,"threshold_uncertainty_score":0.997989},"labels":[],"label_agreement":null},{"id":"W2073189166","doi":"10.1016/j.bbrc.2004.02.120","title":"Chemotaxis-mediated biodegradation of cyclic nitramine explosives RDX, HMX, and CL-20 by Clostridium sp. EDB2","year":2004,"lang":"en","type":"article","venue":"Biochemical and Biophysical Research Communications","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":114,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"University of Guelph","keywords":"Biodegradation; Explosive material; Clostridium; Microbiology; Chemotaxis; Chemistry; Bacteria; Biochemistry; Organic chemistry; Biology","score_opus":0.03847628672015825,"score_gpt":0.3044297600874563,"score_spread":0.2659534733672981,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073189166","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909397,0.0003677821,0.0000147094925,0.0075866645,0.000010449473,0.00027279125,0.00020364832,0.000025289115,0.000578989],"genre_scores_gemma":[0.9960989,0.0022930964,0.0009841863,0.000092238326,0.000024684377,0.000014942594,0.00038718776,0.00000901203,0.0000957974],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985862,0.00011016661,0.0002776328,0.00030978984,0.00041965893,0.0002965533],"domain_scores_gemma":[0.99881834,0.00027560294,0.00007636136,0.0005228676,0.00005979016,0.00024703392],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027320697,0.00013862325,0.00017816578,0.00005116721,0.00020717975,0.000039409384,0.0004840969,0.00013019546,0.000082392646],"category_scores_gemma":[0.00028719986,0.000113015805,0.000042835738,0.00057220773,0.0019410156,0.00012814415,0.0005807513,0.00032014868,0.000086004766],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025332934,0.00044067975,0.0005186478,0.000014291699,0.000008651103,1.8453244e-7,0.000099298064,6.4271e-8,0.99417436,0.00014867396,0.003036737,0.0015330516],"study_design_scores_gemma":[0.0005094095,0.00012461333,0.002371908,0.000028149418,0.000008056169,0.0000014046554,0.000113477065,0.00007769024,0.9896495,0.00051686354,0.006454611,0.00014432528],"about_ca_topic_score_codex":0.00027823038,"about_ca_topic_score_gemma":0.00003169918,"teacher_disagreement_score":0.0074944263,"about_ca_system_score_codex":0.000075587144,"about_ca_system_score_gemma":0.000028319362,"threshold_uncertainty_score":0.71517533},"labels":[],"label_agreement":null},{"id":"W2073223822","doi":"10.1021/es051513e","title":"Evaluation of Isotopic Enrichment Factors for the Biodegradation of Chlorinated Ethenes Using a Parameter Estimation Model:  Toward an Improved Quantification of Biodegradation","year":2006,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biodegradation; Chemistry; Reductive dechlorination; Vinyl chloride; Substrate (aquarium); Environmental chemistry; Kinetic isotope effect; Fractionation; Chromatography; Organic chemistry; Deuterium","score_opus":0.047966278163477594,"score_gpt":0.2903420933172209,"score_spread":0.2423758151537433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073223822","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9337939,0.000028408285,0.065132126,0.00010024797,0.00006772441,0.0008043227,0.000046867957,0.000017138746,0.000009247201],"genre_scores_gemma":[0.990252,0.000011911944,0.009633298,0.0000046394152,0.000003614479,0.00002113998,0.00006163237,0.0000059232034,0.0000058489904],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99837047,0.000044043736,0.00045332077,0.0003228594,0.00063298683,0.00017631051],"domain_scores_gemma":[0.99903566,0.000042672924,0.00055046147,0.00030929642,0.00003958825,0.000022308684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012308244,0.00012187534,0.0001456992,0.00020596484,0.00013110069,0.000009959805,0.00033499565,0.000110805,0.000066677065],"category_scores_gemma":[0.000118846605,0.0000904092,0.00004384362,0.0006554761,0.0011272022,0.00037681768,0.00007800254,0.000048134367,0.0000016155442],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011223256,0.00015283257,0.011717954,0.0000045067227,0.0000039513484,6.0045147e-9,0.00015126454,0.03767613,0.9342886,0.00014763711,0.0000012510892,0.015844613],"study_design_scores_gemma":[0.00016667534,0.0000752999,0.024361104,0.0000029419714,0.00003714777,2.9520544e-7,0.00018191095,0.45579046,0.5184296,0.00089787017,0.0000037810053,0.000052915897],"about_ca_topic_score_codex":0.00036322587,"about_ca_topic_score_gemma":0.000044887034,"teacher_disagreement_score":0.41811433,"about_ca_system_score_codex":0.00035188327,"about_ca_system_score_gemma":0.000040578438,"threshold_uncertainty_score":0.41532236},"labels":[],"label_agreement":null},{"id":"W2074093588","doi":"10.1109/icbbe.2010.5517455","title":"Application of Hog Fuel for the Bioremediation of Oil Contaminated Soils","year":2010,"lang":"en","type":"article","venue":"International Conference on Bioinformatics and Biomedical Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Northern British Columbia","funders":"","keywords":"Environmental remediation; Dispose pattern; Bioremediation; Petroleum; Environmental science; Soil water; Waste management; Soil contamination; Petroleum product; Contamination; Fuel oil; Pulp and paper industry; Environmental engineering; Chemistry; Engineering; Soil science","score_opus":0.008581120565310598,"score_gpt":0.22366289001124948,"score_spread":0.21508176944593888,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074093588","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91871285,0.00001214346,0.07360725,0.0030244337,0.0012081475,0.00039411068,0.00032981156,0.000041170635,0.002670096],"genre_scores_gemma":[0.9969898,0.00007205355,0.002762019,0.000057339435,0.00003198006,0.000008033019,0.00005458852,0.0000030887536,0.00002112221],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99931395,0.0000022793065,0.00029100824,0.000070025315,0.0002408886,0.0000818313],"domain_scores_gemma":[0.999581,0.00009031948,0.0001495427,0.000082560255,0.00004878523,0.00004782336],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021895698,0.00007131292,0.00008560945,0.00004958429,0.000018920548,0.000013502304,0.00017898307,0.00007096627,0.00015068977],"category_scores_gemma":[0.00012808661,0.00004695678,0.000028595314,0.00008824716,0.0001450166,0.000069602,0.00004335187,0.00008158933,0.000007934205],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029939209,0.00006492321,0.00060684426,0.00007568353,0.00002674731,7.970075e-8,0.0003990673,0.000085259926,0.86904496,0.00771559,0.00015601647,0.1217949],"study_design_scores_gemma":[0.00053402357,0.00008784052,0.00801434,0.00002635655,0.000010527668,0.0000019788858,0.00012101659,0.95736545,0.025894323,0.00008934719,0.007749712,0.00010505331],"about_ca_topic_score_codex":0.000025889687,"about_ca_topic_score_gemma":0.000013546188,"teacher_disagreement_score":0.9572802,"about_ca_system_score_codex":0.000011975361,"about_ca_system_score_gemma":0.000011008163,"threshold_uncertainty_score":0.19148418},"labels":[],"label_agreement":null},{"id":"W2074219695","doi":"10.1021/es011479d","title":"Carbon Isotopes as a Tool To Evaluate the Origin and Fate of Vinyl Chloride:  Laboratory Experiments and Modeling of Isotope Evolution","year":2002,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Chemistry; Vinyl chloride; Microcosm; Reductive dechlorination; Environmental chemistry; Isotopes of carbon; Isotope fractionation; Isotope; Dehalococcoides; Fractionation; Isotope analysis; Chloride; Biodegradation; Organic chemistry; Total organic carbon; Geology","score_opus":0.012915108185086052,"score_gpt":0.23754865106128142,"score_spread":0.22463354287619536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074219695","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984897,0.0001918612,0.00003571838,0.00044065688,0.00005372647,0.00034755046,0.000010427062,0.000017800268,0.00041258364],"genre_scores_gemma":[0.9993471,0.000164755,0.00031446916,0.00009614504,0.0000053592717,0.000011828838,3.5097793e-7,0.000005654676,0.000054355118],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99872655,0.000022695489,0.00024187585,0.00037774467,0.0003780384,0.00025312445],"domain_scores_gemma":[0.9995839,0.000008870047,0.00008006911,0.0002548091,0.0000051033035,0.00006724639],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038010493,0.00012604172,0.00014294682,0.00012438715,0.00014455323,0.00001174129,0.00032139025,0.0000759361,0.00035775462],"category_scores_gemma":[0.000047628368,0.0000939432,0.000014522737,0.0006089733,0.0015877536,0.00016898716,0.0004786644,0.00008551256,0.00004499993],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010312883,0.000044372504,0.03075571,0.0000016304157,0.0000024217536,5.5247716e-7,0.00043502272,0.00017704086,0.9663675,0.00007296522,0.00000869529,0.0021237666],"study_design_scores_gemma":[0.0004207567,0.00031583782,0.019814974,0.00001609364,0.000013696825,0.000010397845,0.00093407865,0.021616315,0.95557845,0.00025872837,0.00079535466,0.0002253008],"about_ca_topic_score_codex":0.00015229026,"about_ca_topic_score_gemma":0.000012777607,"teacher_disagreement_score":0.021439275,"about_ca_system_score_codex":0.00018857775,"about_ca_system_score_gemma":0.00000878634,"threshold_uncertainty_score":0.58501446},"labels":[],"label_agreement":null},{"id":"W2075006176","doi":"10.1128/aem.06416-11","title":"Transcriptional Analysis of a Dehalococcoides-Containing Microbial Consortium Reveals Prophage Activation","year":2011,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Dehalococcoides; Biology; Gene; Prophage; Microbiology; Shotgun sequencing; Reductive dechlorination; Genetics; Genome; Chemistry; Escherichia coli; Vinyl chloride; Biodegradation","score_opus":0.012646472275349397,"score_gpt":0.18218973021478016,"score_spread":0.16954325793943076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075006176","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974498,0.000019656309,0.00019783962,0.000017047045,0.000038196446,0.0002641247,0.00017753588,0.000015761305,0.0018200093],"genre_scores_gemma":[0.99816763,0.000030725972,0.0010157579,0.00035797936,0.0000104335995,0.000008843262,0.0003241363,0.000009865392,0.00007464143],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99891955,0.000043111777,0.00035780537,0.00038151967,0.00005612999,0.00024186319],"domain_scores_gemma":[0.99958855,0.00002337565,0.00017831752,0.00013911151,0.0000017175557,0.0000689052],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016100469,0.00017634338,0.00030132977,0.00009379127,0.0000779372,0.0000053251542,0.00012222413,0.00014238809,0.004750361],"category_scores_gemma":[0.000003229738,0.0001591371,0.00008990639,0.00019311323,0.0005266607,0.000069898444,0.00008796212,0.00009308581,0.00008620671],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000110291425,0.00012356382,0.05937493,0.000004008102,0.00014579458,9.803091e-7,0.0007194561,0.000008700541,0.93843406,0.000111504676,0.00006448915,0.00090219476],"study_design_scores_gemma":[0.00068325805,0.000117359305,0.48571977,0.0000039691063,0.00026218971,0.000011395601,0.00029308174,0.00002024359,0.5116238,0.00006691628,0.00094249984,0.00025550742],"about_ca_topic_score_codex":0.00009201307,"about_ca_topic_score_gemma":0.00003081965,"teacher_disagreement_score":0.42681026,"about_ca_system_score_codex":0.00006989079,"about_ca_system_score_gemma":0.0000048679353,"threshold_uncertainty_score":0.99615943},"labels":[],"label_agreement":null},{"id":"W2075294118","doi":"10.1016/j.chemosphere.2010.09.012","title":"Effect of short-chain organic acids and pH on the behaviors of pyrene in soil–water system","year":2010,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":81,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Water Network","keywords":"Chemistry; Pyrene; Oxalic acid; Adsorption; Tartaric acid; Organic matter; Citric acid; Environmental chemistry; Organic acid; Desorption; Environmental remediation; Acetic acid; Inorganic chemistry; Organic chemistry; Contamination","score_opus":0.00341860273797283,"score_gpt":0.1922722312495784,"score_spread":0.18885362851160556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075294118","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985813,0.000005707633,6.283059e-7,0.00006301615,0.00007038923,0.00016766401,0.0000044811727,0.000007686383,0.0010991234],"genre_scores_gemma":[0.99984795,0.000003277156,0.000012967417,0.000019176528,0.000007681534,0.0000022143088,0.000002328242,0.0000062222966,0.00009818083],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99946123,0.00003309751,0.00014840178,0.00013035205,0.00011827928,0.00010861828],"domain_scores_gemma":[0.9997299,0.000032922926,0.000034546538,0.00016849255,0.0000035399935,0.000030612126],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003371914,0.000082671366,0.0001259011,0.0000031759112,0.000019687055,0.000005024985,0.0001194797,0.000075685166,0.0018059548],"category_scores_gemma":[0.00001731809,0.000043451666,0.00002353049,0.00007842579,0.00013139985,0.000024777783,0.00006612862,0.00010283082,0.000046341025],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016991684,0.000020154337,0.1086585,0.000022687263,0.0000014851679,8.0763823e-7,0.00013566246,0.0000016931799,0.88943243,0.0000034812713,0.00006781318,0.0016383183],"study_design_scores_gemma":[0.0001803516,0.00007563303,0.025720375,0.000019186044,0.0000062746335,0.0000015775179,0.00006216832,0.00002961839,0.9738056,0.0000014088025,0.00004660031,0.000051222058],"about_ca_topic_score_codex":0.00006691839,"about_ca_topic_score_gemma":0.0003189134,"teacher_disagreement_score":0.084373176,"about_ca_system_score_codex":0.000024438355,"about_ca_system_score_gemma":0.0000027863216,"threshold_uncertainty_score":0.9991065},"labels":[],"label_agreement":null},{"id":"W2075487534","doi":"10.1111/j.1574-6968.2006.00291.x","title":"Microbial adhesion to hydrocarbons: twenty-five years of doing MATH","year":2006,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":253,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Citation; Adhesion; Perspective (graphical); Quarter (Canadian coin); Solid surface; Chemistry; Hydrocarbon; Bacteria; Nanotechnology; Mathematics; History; Biology; Archaeology; Organic chemistry; Computer science; Materials science; Library science; Paleontology; Geometry","score_opus":0.012192907399408193,"score_gpt":0.2417796832473557,"score_spread":0.22958677584794748,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075487534","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20713179,0.7804093,0.00010843982,0.00065626873,0.003873668,0.0044909324,0.0018487757,0.0002445625,0.0012363164],"genre_scores_gemma":[0.001936604,0.983615,0.0049901693,0.0053327754,0.0004959794,0.000046866775,0.0021475886,0.00019794326,0.0012370645],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99742883,0.0002313141,0.0008646783,0.0007925299,0.00010580943,0.0005768321],"domain_scores_gemma":[0.9987527,0.0000955275,0.0005843427,0.00045056184,0.0000057121633,0.00011111686],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00028305626,0.0004921243,0.0012462724,0.00020746262,0.00006363828,0.000019899173,0.0006829685,0.00050387566,0.00030047022],"category_scores_gemma":[0.00002403773,0.00044367812,0.00045352624,0.0004430115,0.00031434753,0.000054502874,0.00045301474,0.00028028907,0.003195845],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011123086,0.0000662109,0.00005508033,0.0003358002,0.000058470006,0.000024861543,0.00009903088,0.00000749159,0.8125563,0.000002042696,0.069257334,0.11752624],"study_design_scores_gemma":[0.00019119788,0.000047866175,0.000055882127,0.00096009293,0.00013896642,0.00005897178,0.000003837043,3.3109697e-7,0.00172541,6.4859273e-7,0.9963451,0.00047169297],"about_ca_topic_score_codex":0.00033540232,"about_ca_topic_score_gemma":0.000098481694,"teacher_disagreement_score":0.9270878,"about_ca_system_score_codex":0.00034437492,"about_ca_system_score_gemma":0.000038816845,"threshold_uncertainty_score":0.9998015},"labels":[],"label_agreement":null},{"id":"W2075741795","doi":"10.1007/s12275-014-4109-x","title":"Biodegradation of C5-C8 fatty acids and production of aroma volatiles by Myroides sp. ZB35 isolated from activated sludge","year":2014,"lang":"en","type":"article","venue":"The Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Petro-Canada","funders":"Fundamental Research Funds for the Central Universities; Central University Basic Research Fund of China; Royal Society","keywords":"Hexanoic acid; Chemistry; Aroma; Biodegradation; Food science; Fatty acid; Ricinoleic acid; Activated sludge; Caproic Acid; Organic chemistry; Biochemistry; Wastewater; Waste management","score_opus":0.006648651980025489,"score_gpt":0.19408792528924898,"score_spread":0.1874392733092235,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075741795","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99871916,0.000098104465,0.00022427131,0.00060742587,0.00018546345,0.000087267916,0.000049574683,0.0000041980484,0.000024537181],"genre_scores_gemma":[0.9992534,0.00021349399,0.0003719977,0.000055752844,0.00003005762,1.073379e-7,0.000027716947,0.0000050372228,0.000042441927],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990538,0.00024502163,0.0004237689,0.0001069774,0.00006205623,0.00010840853],"domain_scores_gemma":[0.999017,0.0000895512,0.0007021756,0.00011988302,0.0000395345,0.000031843563],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005147177,0.00009922707,0.00022469668,0.00003865456,0.000043822114,0.000004164143,0.0001719245,0.00010196033,0.0001829443],"category_scores_gemma":[0.00009669162,0.000061082734,0.0000375178,0.00012314256,0.0003183692,0.00010888793,0.000055359775,0.00012241231,0.000012680268],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019710723,0.00005004257,0.019061392,0.0000037616721,0.000029118224,7.848355e-8,0.00028372707,0.000010073359,0.97536623,8.027778e-7,0.0029786935,0.002018983],"study_design_scores_gemma":[0.00034625595,0.00024249211,0.048110813,0.000018286766,0.00003290427,0.00003105973,0.00006864836,0.00003373981,0.94926524,0.000072027484,0.0017154895,0.0000630499],"about_ca_topic_score_codex":0.00015060195,"about_ca_topic_score_gemma":0.000045673933,"teacher_disagreement_score":0.029049419,"about_ca_system_score_codex":0.000029694125,"about_ca_system_score_gemma":0.000008606371,"threshold_uncertainty_score":0.24908815},"labels":[],"label_agreement":null},{"id":"W2076021491","doi":"10.1080/10889868.2013.807772","title":"Degradation Rates for Petroleum Hydrocarbons Undergoing Bioventing at the Meso-Scale","year":2013,"lang":"en","type":"article","venue":"Bioremediation Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Loam; Environmental remediation; Soil water; Environmental science; Groundwater remediation; Silt; Soil science; Soil contamination; Environmental engineering; Degradation (telecommunications); Chemistry; Geology; Contamination; Ecology","score_opus":0.01123999471374107,"score_gpt":0.23289623169118548,"score_spread":0.2216562369774444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076021491","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.989546,0.000060286413,0.0028419946,0.0054762857,0.00063092186,0.00037437573,0.000008928002,0.00002977729,0.0010314127],"genre_scores_gemma":[0.9954926,0.00008856791,0.0013403022,0.00058088126,0.00031092388,0.000017274397,0.000040872175,0.000015165486,0.0021134368],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987359,0.00007430723,0.0003605196,0.00018697184,0.0003419408,0.00030035217],"domain_scores_gemma":[0.9992213,0.00015063747,0.0003408943,0.00012624246,0.00002668059,0.0001342289],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0005681185,0.00013109061,0.000099724755,0.000045601373,0.00059034943,0.00017425923,0.00019860368,0.00007115905,0.0025716594],"category_scores_gemma":[0.0001745404,0.000086560816,0.000105748324,0.0001645166,0.000093040646,0.00037392258,0.00007274296,0.00011951829,0.0008627656],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020555262,0.000054091037,0.13815942,0.0000055456944,0.000023433688,5.1576603e-7,0.0003323065,0.0001624055,0.785954,0.000017162618,0.065152794,0.010117771],"study_design_scores_gemma":[0.0037906116,0.0003265188,0.483908,0.0000611657,0.00013164368,0.00012755983,0.0013510481,0.023894668,0.3890239,0.0021011871,0.094283246,0.0010004522],"about_ca_topic_score_codex":0.000028472963,"about_ca_topic_score_gemma":0.0003260308,"teacher_disagreement_score":0.3969301,"about_ca_system_score_codex":0.00026945645,"about_ca_system_score_gemma":0.000029836123,"threshold_uncertainty_score":0.9999152},"labels":[],"label_agreement":null},{"id":"W2076518284","doi":"10.1016/s1388-1981(00)00039-1","title":"Mass spectrometry monitoring of rhamnolipids from a growing culture of Pseudomonas aeruginosa strain 57RP","year":2000,"lang":"en","type":"article","venue":"Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":206,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Pseudomonas aeruginosa; Strain (injury); Microbiology; Mass spectrometry; Chemistry; Bacteria; Biology; Chromatography; Genetics","score_opus":0.00584928492950976,"score_gpt":0.21461957701975043,"score_spread":0.20877029209024067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076518284","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960996,0.0001765554,0.000042578795,0.0001472254,0.00013966387,0.000172242,0.00035863917,0.000021312664,0.002842207],"genre_scores_gemma":[0.994475,0.00054849545,0.0046116435,0.00010292344,0.00009054275,0.0000021763963,0.0000941736,0.000017942648,0.000057070447],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982624,0.00015961277,0.0005196047,0.0004976948,0.00023910012,0.00032157724],"domain_scores_gemma":[0.99917364,0.000047463618,0.0002953943,0.00034330523,0.000020241507,0.0001199286],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00017312916,0.00029575825,0.00050142134,0.000073577874,0.00004809859,0.000011827454,0.00039124486,0.00028603722,0.00052246306],"category_scores_gemma":[0.000014539344,0.00025497333,0.00021159415,0.00034656993,0.000599781,0.0001072825,0.00015776076,0.0002001989,0.000017841783],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000083039595,0.0001771655,0.0011755276,0.000031850206,0.00006606438,0.0000014634373,0.00047149244,0.000004816064,0.9965701,0.000027455178,0.000056858684,0.0013341691],"study_design_scores_gemma":[0.0005909261,0.00032364545,0.008816923,0.000038371832,0.00006284416,0.0000012405479,0.00018201311,0.00001539162,0.9892732,0.0002973984,0.00014446554,0.00025357638],"about_ca_topic_score_codex":0.00017706814,"about_ca_topic_score_gemma":0.0000014941568,"teacher_disagreement_score":0.0076413956,"about_ca_system_score_codex":0.000026244212,"about_ca_system_score_gemma":0.000022007669,"threshold_uncertainty_score":0.9999902},"labels":[],"label_agreement":null},{"id":"W2076853802","doi":"10.1128/aem.71.2.1058-1065.2005","title":"<i>Desulfitobacterium hafniense</i> Is Present in a High Proportion within the Biofilms of a High-Performance Pentachlorophenol-Degrading, Methanogenic Fixed-Film Reactor","year":2005,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Armand Frappier Museum; Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Pentachlorophenol; Bacteria; Temperature gradient gel electrophoresis; Biofilm; Microbiology; Chlorophenol; Chemistry; Archaea; Acclimatization; Bioreactor; Biology; Food science; Environmental chemistry; Chromatography; 16S ribosomal RNA; Phenol; Ecology","score_opus":0.005125844641015917,"score_gpt":0.17456185150191744,"score_spread":0.16943600686090152,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076853802","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99852216,0.00006671555,0.0000042308498,0.00043111984,0.00012080596,0.0005178076,0.00015273917,0.000015989473,0.00016845344],"genre_scores_gemma":[0.99812025,0.00027141834,0.00052788964,0.0006624638,0.000050386818,0.000024253977,0.00017299189,0.000017623912,0.00015274173],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984976,0.000054593995,0.0004970744,0.00048705906,0.00011438909,0.00034926587],"domain_scores_gemma":[0.9993406,0.00002644814,0.0002854343,0.00027488152,0.0000016827619,0.00007094727],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002581074,0.00025140462,0.00027807342,0.000041784133,0.00008601486,0.000012855083,0.0002470928,0.00016547376,0.0010201215],"category_scores_gemma":[0.000003181267,0.00017485309,0.000042879623,0.00013239312,0.00060471933,0.000110318855,0.0002519207,0.00018938673,0.00026933663],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009155911,0.00016663168,0.028029794,0.0000079935435,0.000016444072,8.011823e-7,0.0005937711,0.00007107521,0.96770734,0.000017455823,0.00050142396,0.0027957025],"study_design_scores_gemma":[0.00088440045,0.00012020256,0.11145112,0.000008098777,0.000022066297,0.000031573167,0.00019860727,0.000081222475,0.88308275,0.000017800307,0.003862352,0.00023983525],"about_ca_topic_score_codex":0.00030245606,"about_ca_topic_score_gemma":0.00009888548,"teacher_disagreement_score":0.084624626,"about_ca_system_score_codex":0.00016016592,"about_ca_system_score_gemma":0.00000802951,"threshold_uncertainty_score":0.99989307},"labels":[],"label_agreement":null},{"id":"W2076909849","doi":"10.1016/s0168-6496(03)00216-2","title":"Phylogenetic and metabolic diversity of hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX)-transforming bacteria in strictly anaerobic mixed cultures enriched on RDX as nitrogen source","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Strategic Environmental Research and Development Program","keywords":"Clostridia; Biology; Clostridium; Microbiology; Obligate anaerobe; Bacteria; Methanogen; Desulfovibrio; Enrichment culture; Nitrite; Anaerobic bacteria; Nitrogen; Food science; Environmental chemistry; Chemistry; Nitrate; Organic chemistry; Ecology","score_opus":0.00756123837206209,"score_gpt":0.20625562425508104,"score_spread":0.19869438588301894,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076909849","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99821585,0.00021791176,0.000011031321,0.000112798705,0.00031519248,0.000495032,0.00006793511,0.000026431455,0.0005378288],"genre_scores_gemma":[0.99836916,0.0003253244,0.0004283563,0.00059589295,0.000021484606,0.000007324231,0.000070866816,0.00001642848,0.00016514529],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977498,0.00048157858,0.00046861486,0.00061539246,0.00007757655,0.0006070611],"domain_scores_gemma":[0.9991982,0.00015394704,0.00025370868,0.00023920518,0.000020358462,0.00013458362],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00044917088,0.00032890536,0.00060315087,0.00019140406,0.00018257988,0.000010067357,0.00032153536,0.00039002186,0.0015089985],"category_scores_gemma":[0.0001481205,0.00029300794,0.00010063053,0.00042049086,0.00048246206,0.00007043739,0.00027667344,0.00026710142,0.00025151676],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009782852,0.00015294034,0.24861172,0.000005347585,0.00004073125,0.0000072657717,0.00030258266,0.000044037522,0.7501294,0.00006501969,0.00020921661,0.00033393447],"study_design_scores_gemma":[0.0032391017,0.0005132377,0.43736127,0.000007795052,0.00007220547,0.000094338066,0.00020421782,0.000006835259,0.5430363,0.00023970584,0.014738719,0.00048628182],"about_ca_topic_score_codex":0.0002953371,"about_ca_topic_score_gemma":0.0016429747,"teacher_disagreement_score":0.2070931,"about_ca_system_score_codex":0.000117872194,"about_ca_system_score_gemma":0.000035581532,"threshold_uncertainty_score":0.9999522},"labels":[],"label_agreement":null},{"id":"W2077196849","doi":"10.1016/s0169-7722(02)00081-5","title":"Laboratory evidence of MTBE biodegradation in Borden aquifer material","year":2002,"lang":"en","type":"article","venue":"Journal of Contaminant Hydrology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":67,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"BTEX; Biodegradation; Aquifer; Microcosm; Gasoline; Ethylbenzene; Environmental remediation; Environmental chemistry; Bioremediation; Biostimulation; Chemistry; Xylene; Diesel fuel; Environmental science; Waste management; Toluene; Groundwater; Contamination; Geology; Organic chemistry; Ecology; Geotechnical engineering","score_opus":0.014539557134495227,"score_gpt":0.22686089374140767,"score_spread":0.21232133660691244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077196849","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983552,0.00018175071,0.000023103823,0.00076316594,0.0003717475,0.00006496564,0.0000068497056,0.000002371073,0.00023084316],"genre_scores_gemma":[0.9991149,0.00036299884,0.0001757686,0.000207568,0.000050480005,3.7457667e-7,6.1635563e-7,0.000004020328,0.000083276835],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99890953,0.00013419366,0.00052205595,0.00009723009,0.00018844186,0.0001485488],"domain_scores_gemma":[0.9993347,0.00005434809,0.00044251312,0.00009108038,0.000028348684,0.000049027352],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005132593,0.000078678546,0.00022689288,0.00008382062,0.000016003947,0.0000067387095,0.0001826353,0.00009448332,0.0036316833],"category_scores_gemma":[0.00011179327,0.00006134385,0.00003916124,0.00017355723,0.000120570476,0.0002531289,0.000040726296,0.00010474293,0.000090629685],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014467363,0.00009237625,0.085007176,0.0000072086095,0.000006067652,0.000036417907,0.00027786446,0.000024217436,0.91038203,0.0000088217375,0.001859227,0.0021539212],"study_design_scores_gemma":[0.0027892774,0.002221499,0.4867208,0.00021302165,0.000059783826,0.0001989204,0.00011082802,0.0014900761,0.4724118,0.000090044196,0.033309374,0.00038455616],"about_ca_topic_score_codex":0.000057896275,"about_ca_topic_score_gemma":0.0001658412,"teacher_disagreement_score":0.43797022,"about_ca_system_score_codex":0.00007544108,"about_ca_system_score_gemma":0.000013472981,"threshold_uncertainty_score":0.9972791},"labels":[],"label_agreement":null},{"id":"W2077535993","doi":"10.1016/j.chemosphere.2004.10.007","title":"Effects of nutrient and temperature on degradation of petroleum hydrocarbons in contaminated sub-Antarctic soil","year":2004,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":198,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Rimouski","funders":"","keywords":"Bioremediation; Total petroleum hydrocarbon; Environmental chemistry; Hydrocarbon; Mesocosm; Petroleum; Soil contamination; Chemistry; Soil water; Biostimulation; Fertilizer; Biodegradation; Contamination; Nutrient; Diesel fuel; Polycyclic aromatic hydrocarbon; Environmental science; Soil science; Ecology; Biology","score_opus":0.0026679853637384256,"score_gpt":0.1742876061554355,"score_spread":0.1716196207916971,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077535993","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999272,0.0000588949,0.0000027736298,0.00010785584,0.0000358472,0.00014727657,0.0000028829752,0.000006795752,0.00036566443],"genre_scores_gemma":[0.99973106,0.00006113755,0.000057712372,0.000069993315,0.0000035989906,0.0000019056754,0.0000076354445,0.000004858795,0.000062078674],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994533,0.000016665066,0.0001509152,0.0001505482,0.00012779512,0.00010078395],"domain_scores_gemma":[0.99977446,0.00002616558,0.00007685212,0.00008115242,0.0000031940172,0.000038199167],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006146882,0.00008361603,0.00013012486,0.000008831651,0.000014822556,0.000003941197,0.00005746363,0.00007367897,0.00004009118],"category_scores_gemma":[0.000032600223,0.00007045928,0.000021309055,0.00015781146,0.0000879866,0.000045598765,0.000024315308,0.00007710209,0.00001038298],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003958684,0.00015895744,0.02149761,0.00003897878,0.0000034615846,0.000003062642,0.00015157764,0.000048868787,0.9775962,0.000016897166,0.00004592607,0.0003988364],"study_design_scores_gemma":[0.0010863186,0.0000923702,0.1616343,0.00006612825,0.0000060868797,0.0000011132245,0.00004271316,0.000027670318,0.8369031,0.00005706146,0.000022630706,0.000060495415],"about_ca_topic_score_codex":0.00021919771,"about_ca_topic_score_gemma":0.00030016736,"teacher_disagreement_score":0.14069311,"about_ca_system_score_codex":0.00009704375,"about_ca_system_score_gemma":0.000011157214,"threshold_uncertainty_score":0.2873246},"labels":[],"label_agreement":null},{"id":"W2077598918","doi":"10.1007/s00248-001-1019-3","title":"Characterization of Sphingomonas sp. Ant 17, an Aromatic Hydrocarbon-Degrading Bacterium Isolated from Antarctic Soil","year":2002,"lang":"en","type":"article","venue":"Microbial Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":143,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Sphingomonas; Aromatic hydrocarbon; Bioremediation; Mesophile; Biology; Biodegradation; Phenanthrene; Strain (injury); Polycyclic aromatic hydrocarbon; Hydrocarbon; Environmental chemistry; Bacteria; Food science; Botany; Pseudomonas; Chemistry; Organic chemistry; Ecology","score_opus":0.009363940827908795,"score_gpt":0.1870307911690437,"score_spread":0.1776668503411349,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077598918","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99846596,0.000004107763,0.00003147113,0.00033437475,0.00046769532,0.00023303082,0.00007904524,0.000056916222,0.0003274088],"genre_scores_gemma":[0.99838185,0.000038559054,0.0002683827,0.0007147848,0.000087521934,0.0000024650385,0.00028197237,0.000022184598,0.0002022826],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985192,0.0001043224,0.0004880288,0.00041115697,0.000114957664,0.0003623252],"domain_scores_gemma":[0.9992817,0.000031384177,0.00029841994,0.00025874152,0.000009425748,0.00012030575],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013274858,0.00020911498,0.00032460436,0.000067273235,0.00010003246,0.0000299015,0.00027092337,0.0002042071,0.011944668],"category_scores_gemma":[0.000022835125,0.00020572178,0.00006724254,0.00024300719,0.00017950873,0.00027716943,0.00011212636,0.0001391486,0.0006950575],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028160277,0.0002233558,0.042192664,0.000005168244,0.000016304444,0.000007596129,0.0006162833,0.000011149066,0.9560064,7.512959e-7,0.00029770914,0.0005944451],"study_design_scores_gemma":[0.000986207,0.0003451395,0.52793646,0.00002520338,0.00005010366,0.000030321811,0.000032804295,0.0071132868,0.46101654,0.000042763022,0.0019780258,0.00044315803],"about_ca_topic_score_codex":0.0005671289,"about_ca_topic_score_gemma":0.0013435165,"teacher_disagreement_score":0.4949899,"about_ca_system_score_codex":0.00016319982,"about_ca_system_score_gemma":0.000010078944,"threshold_uncertainty_score":0.98895854},"labels":[],"label_agreement":null},{"id":"W2077946128","doi":"10.1016/j.biortech.2008.09.048","title":"Bioaugmentation of microbial communities in laboratory and pilot scale sequencing batch biofilm reactors using the TOL plasmid","year":2008,"lang":"en","type":"article","venue":"Bioresource Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":78,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"Deutsches Zentrum für Luft- und Raumfahrt","keywords":"Bioaugmentation; Plasmid; Biofilm; Microbiology; Pseudomonas putida; Microbial consortium; Bioreactor; Chemistry; Wastewater; Inoculation; Pseudomonas; Biodegradation; Degradation (telecommunications); Pseudomonadaceae; Pseudomonadales; Bioremediation; Bacteria; Biology; Microorganism; Environmental engineering; Gene; Biochemistry; Environmental science; Organic chemistry","score_opus":0.02507921984907507,"score_gpt":0.2233620722463798,"score_spread":0.19828285239730473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077946128","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992079,0.00006459889,0.000011907242,0.00031938488,0.000042642652,0.00017720964,0.00003348478,0.000046247525,0.00009658176],"genre_scores_gemma":[0.9987108,0.0000874549,0.0010134046,0.00014896448,0.000008253938,0.000002249452,0.0000069643293,0.00000879887,0.000013084902],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99922127,0.00007533892,0.000249191,0.00014897002,0.00010840424,0.00019685215],"domain_scores_gemma":[0.9995732,0.000038855622,0.00013356759,0.00021627755,0.0000113439155,0.000026798622],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019242034,0.000113575996,0.0001415475,0.00014866707,0.00014328168,0.0000069699586,0.0002257839,0.00013242755,0.00013622022],"category_scores_gemma":[0.000022314958,0.00008895729,0.000015631664,0.0005682308,0.0013315517,0.00006776174,0.00018604413,0.00016081354,0.000012830678],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014487388,0.000025035402,0.27278578,0.0000033560113,0.0000023151097,0.0000021895662,0.0009975857,0.000013441071,0.7258534,0.000006275033,0.00012137255,0.00017477227],"study_design_scores_gemma":[0.00061879377,0.00014900033,0.043875802,0.00003210328,0.000009264296,0.00006052395,0.005685941,0.00033151504,0.9467559,0.000022159302,0.002258269,0.0002007438],"about_ca_topic_score_codex":0.0015694508,"about_ca_topic_score_gemma":0.0015274739,"teacher_disagreement_score":0.22890998,"about_ca_system_score_codex":0.00015193343,"about_ca_system_score_gemma":0.000023458257,"threshold_uncertainty_score":0.49061576},"labels":[],"label_agreement":null},{"id":"W2079144946","doi":"10.4296/cwrj2603345","title":"Toxicity Screening of Benzene, Toluene, Ethylbenzene and Xylene (BTEX) Hydrocarbons in Groundwater at Sour-Gas Plants","year":2001,"lang":"en","type":"article","venue":"Canadian Water Resources Journal / Revue canadienne des ressources hydriques","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"BTEX; Environmental chemistry; Ethylbenzene; Xylene; Groundwater; Toluene; Environmental science; Chemistry; Benzene; Environmental remediation; Contamination; Biology; Ecology; Geology; Organic chemistry","score_opus":0.013148572812415368,"score_gpt":0.1895507312526457,"score_spread":0.17640215844023033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079144946","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965371,0.0005131193,0.000009622888,0.0007905614,0.00010596839,0.00021965214,0.000047302943,0.000022916864,0.0017537618],"genre_scores_gemma":[0.99705064,0.0010847368,0.00023510694,0.00048703147,0.00014013225,0.0000044712133,0.000023830882,0.00005105983,0.00092301256],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967417,0.00025468873,0.0007885644,0.0005604343,0.00023999743,0.0014145875],"domain_scores_gemma":[0.997789,0.000060356106,0.0002605461,0.00032734915,0.000025567424,0.0015371474],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00082669966,0.00041011255,0.0005314759,0.0005515835,0.0005533919,0.0001613105,0.00057309493,0.00027315423,0.00085970876],"category_scores_gemma":[0.00007563619,0.00033687282,0.0001262315,0.0003144283,0.0005274852,0.00036114434,0.00017556717,0.0004506692,0.000033477732],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033303996,0.0000712638,0.55326587,0.000055574463,0.0000969171,0.0017161055,0.20163411,0.0011408413,0.22727293,7.696208e-7,0.00010658289,0.014306033],"study_design_scores_gemma":[0.0016049442,0.00050918024,0.20342864,0.00060888845,0.00006332923,0.004406231,0.001232218,0.0013230585,0.09702599,0.00060868857,0.68781483,0.00137397],"about_ca_topic_score_codex":0.2574625,"about_ca_topic_score_gemma":0.94117,"teacher_disagreement_score":0.68770826,"about_ca_system_score_codex":0.001095106,"about_ca_system_score_gemma":0.000006013648,"threshold_uncertainty_score":0.9999083},"labels":[],"label_agreement":null},{"id":"W2079479993","doi":"10.1111/j.1574-6968.1997.tb12693.x","title":"Mineralization of p-nitrophenol by pentachlorophenol-degrading Sphingomonas spp.","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Région Normandie","keywords":"Pentachlorophenol; Nitrophenol; Chemistry; Mineralization (soil science); Nitrite; 4-Nitrophenol; Sphingomonas paucimobilis; Biodegradation; Sphingomonas; Nuclear chemistry; Food science; Chromatography; Environmental chemistry; Biochemistry; Bacteria; Nitrogen; Biology; Organic chemistry; Catalysis","score_opus":0.003490199419019949,"score_gpt":0.17218010064379316,"score_spread":0.1686899012247732,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079479993","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971989,0.000045853565,0.00038163894,0.0009289617,0.00024974343,0.00016982983,0.00009326653,0.000039269675,0.0008925486],"genre_scores_gemma":[0.99627364,0.000009149404,0.0008114761,0.0018001636,0.00006095728,0.0000024608453,0.0004537408,0.000016041744,0.00057238655],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989191,0.0000629008,0.00033258123,0.00031354808,0.00007099914,0.000300856],"domain_scores_gemma":[0.9995706,0.000020967549,0.00019858734,0.000164517,0.0000076477145,0.00003764928],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010852455,0.00017146757,0.00018566281,0.000041312418,0.00007580096,0.000013141287,0.00021795336,0.00010587555,0.0018785045],"category_scores_gemma":[0.000009974876,0.0001546986,0.00006778666,0.00019089117,0.000282075,0.000092643764,0.00007819258,0.00009070745,0.0004682388],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000135109585,0.00004650572,0.053553846,0.0000031002003,0.0000065123118,0.0000017349664,0.000043074237,0.0000715521,0.81154495,0.000011916082,0.13459943,0.000103838174],"study_design_scores_gemma":[0.0008950766,0.000051807892,0.023368496,0.000011497162,0.00002071119,0.00002547642,0.000023823164,0.000038572263,0.91551226,0.000025919984,0.059651557,0.0003747732],"about_ca_topic_score_codex":0.0012480546,"about_ca_topic_score_gemma":0.00010323079,"teacher_disagreement_score":0.1039673,"about_ca_system_score_codex":0.00010768363,"about_ca_system_score_gemma":0.0000039730503,"threshold_uncertainty_score":0.9990339},"labels":[],"label_agreement":null},{"id":"W2079593308","doi":"10.1098/rstb.2012.0319","title":"The pentachlorophenol-dehalogenating <i>Desulfitobacterium hafniense</i> strain PCP-1","year":2013,"lang":"en","type":"review","venue":"Philosophical Transactions of the Royal Society B Biological Sciences","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Pentachlorophenol; Strain (injury); Chemistry; Chlorophenol; Microbiology; Environmental chemistry; Biology; Phenol; Organic chemistry","score_opus":0.0743705137024949,"score_gpt":0.2873582591324255,"score_spread":0.21298774542993062,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079593308","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0043073967,0.96847534,0.00068335177,0.0113769565,0.002982981,0.004633773,0.0013524331,0.0002568107,0.005930974],"genre_scores_gemma":[0.025219243,0.972906,0.00087625737,0.00034926864,0.00022446617,0.00007282723,0.000016192971,0.000020485022,0.00031527798],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965087,0.0004942185,0.00090144185,0.00073434843,0.0007130648,0.0006481935],"domain_scores_gemma":[0.9980211,0.0007369411,0.0005944892,0.00044019407,0.000028418217,0.00017884426],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":["sts"],"category_scores_codex":[0.0012238766,0.00047281117,0.00077253964,0.000012625654,0.0018531644,0.00014925386,0.0023048169,0.00052895135,0.0017521372],"category_scores_gemma":[0.00014691344,0.00019052366,0.0015635014,0.0008815516,0.004704372,0.00010235385,0.0002638888,0.0008051916,0.0002867776],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010138609,0.00041227936,0.00020221311,0.00039008464,0.00019924514,8.266597e-7,0.0001494964,0.0001707747,0.0015488947,0.00040072188,0.0015425199,0.9949728],"study_design_scores_gemma":[0.00036151163,0.00055556,0.0006223054,0.000947126,0.00041659462,0.000026738438,0.00023205386,0.00070520496,0.0002464459,0.0060357978,0.9884509,0.0013997857],"about_ca_topic_score_codex":0.00011012636,"about_ca_topic_score_gemma":0.0000120038285,"teacher_disagreement_score":0.993573,"about_ca_system_score_codex":0.00018394177,"about_ca_system_score_gemma":0.000071818955,"threshold_uncertainty_score":0.9994463},"labels":[],"label_agreement":null},{"id":"W2079758890","doi":"10.1007/s00253-004-1625-3","title":"Metabolite production during transformation of 2,4,6-trinitrotoluene (TNT) by a mixed culture acclimated and maintained on crude oil-containing media","year":2004,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; University of Waterloo","funders":"","keywords":"Trinitrotoluene; Azoxy; Metabolite; Chemistry; Incubation; Mineralization (soil science); Biotransformation; Nuclear chemistry; Chromatography; Biochemistry; Organic chemistry; Nitrogen","score_opus":0.003919985835279555,"score_gpt":0.18052637659918697,"score_spread":0.1766063907639074,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079758890","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978917,0.00012214744,0.000039102364,0.0012641618,0.00007613933,0.00025857662,0.00007249626,0.00009155762,0.0001841154],"genre_scores_gemma":[0.99821544,0.0007608163,0.0006527999,0.0001733514,0.000012374939,0.000013394428,0.00014716145,0.000008741843,0.00001589891],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99893975,0.00002927918,0.00030588065,0.00039695646,0.000042942127,0.00028516562],"domain_scores_gemma":[0.99963814,0.000015156489,0.00015408614,0.00013834017,0.000008905463,0.000045356697],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017489147,0.00019379922,0.00027223167,0.000096369324,0.00012969009,0.0000072908156,0.00011437317,0.0005296604,0.00004141556],"category_scores_gemma":[0.000029550898,0.00015662798,0.000025676574,0.00023046382,0.0005519892,0.000065426546,0.00008062126,0.00023585063,0.000025814828],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002626478,0.00005884113,0.000297669,0.000020644069,0.000021352143,0.0000010268255,0.0004905193,0.0000045360225,0.9943959,0.0011061109,0.000031017848,0.0033097423],"study_design_scores_gemma":[0.0014641286,0.00010615577,0.0024183604,0.000013056888,0.000022245236,0.00006209823,0.00035042939,6.4534936e-7,0.99362344,0.0002461761,0.0015227634,0.00017047695],"about_ca_topic_score_codex":0.000026434454,"about_ca_topic_score_gemma":0.000075074815,"teacher_disagreement_score":0.0031392653,"about_ca_system_score_codex":0.000057906003,"about_ca_system_score_gemma":0.000007142296,"threshold_uncertainty_score":0.6387104},"labels":[],"label_agreement":null},{"id":"W2080008584","doi":"10.1080/09593332608618606","title":"Effect of Sulfidogenic and Methanogenic Inhibitors on Reductive Dehalogenation of 2-Chlorophenol","year":2005,"lang":"en","type":"article","venue":"Environmental Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Halogenation; Methanogenesis; Propionate; Chemistry; Molybdate; Nuclear chemistry; Inorganic chemistry; Sodium molybdate; Medicinal chemistry; Methane; Organic chemistry","score_opus":0.002475120184380055,"score_gpt":0.1999978165612402,"score_spread":0.19752269637686012,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080008584","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99891096,0.0001268826,0.000006634769,0.00019604573,0.000047555637,0.0002652288,0.000022161545,0.000022913906,0.00040162832],"genre_scores_gemma":[0.99936587,0.00010918442,0.0003958486,0.000024816918,0.000013580939,0.000005968123,0.0000071753143,0.000010244869,0.00006728705],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991023,0.000057239933,0.0002472352,0.00026508473,0.0001763275,0.0001518201],"domain_scores_gemma":[0.9995702,0.000040840838,0.0001654484,0.00018577644,0.0000011463395,0.00003657287],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019248677,0.00013553849,0.00019039818,0.00010921579,0.000032099313,0.0000014479182,0.0001310258,0.00016493835,0.00079170434],"category_scores_gemma":[0.00003199735,0.00011550762,0.000047430654,0.00016748092,0.0006097712,0.00006418591,0.00015146488,0.0001010621,0.00016717575],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000064586704,0.00008078633,0.021050679,0.0000041206854,0.0000133682715,5.643545e-7,0.00007188431,0.000024438765,0.92368984,0.000026074367,0.000045059962,0.054928623],"study_design_scores_gemma":[0.0004988274,0.0008030191,0.009382466,0.0000059565314,0.000019746672,0.000009145345,0.000043702523,0.00001853252,0.98856056,0.000059145677,0.00050195446,0.00009695158],"about_ca_topic_score_codex":0.000007529413,"about_ca_topic_score_gemma":0.0000058556,"teacher_disagreement_score":0.06487074,"about_ca_system_score_codex":0.00013949114,"about_ca_system_score_gemma":0.0000021680692,"threshold_uncertainty_score":0.86686075},"labels":[],"label_agreement":null},{"id":"W2080902695","doi":"10.1002/jms.244","title":"Liquid chromatographic/mass spectrometric detection of the 3‐(3‐hydroxyalkanoyloxy) alkanoic acid precursors of rhamnolipids in <i>Pseudomonas aeruginosa</i> cultures","year":2001,"lang":"en","type":"article","venue":"Journal of Mass Spectrometry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Chemistry; Rhamnolipid; Chromatography; Hydrolysis; Fragmentation (computing); Residue (chemistry); Mass spectrometry; Deuterium; Organic chemistry; Pseudomonas aeruginosa; Bacteria","score_opus":0.004666086359097397,"score_gpt":0.20489294404772757,"score_spread":0.20022685768863016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080902695","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99551404,0.00053028844,0.0003446195,0.0002857281,0.00052393874,0.00021780754,0.000009899691,0.000012001325,0.0025617038],"genre_scores_gemma":[0.9974429,0.0010735533,0.00117463,0.00006520513,0.00012842246,0.000001154536,8.588524e-7,0.000018683722,0.00009456714],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970376,0.00019175322,0.0010902148,0.00025601732,0.0010113581,0.00041304698],"domain_scores_gemma":[0.9980699,0.00007602697,0.0013242459,0.00033491928,0.00005986803,0.00013506494],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008615542,0.00025875564,0.00054246775,0.0008812391,0.000065814354,0.00002188007,0.00072560785,0.00019696339,0.0009528135],"category_scores_gemma":[0.00023270072,0.00017787497,0.0004115939,0.0052103475,0.0002882788,0.0003061301,0.000099730125,0.00051366386,0.00001726812],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021696239,0.0002201866,0.08730782,0.00002002799,0.00004488323,0.0000114361155,0.000115772695,0.00007726913,0.91154796,0.000013622763,0.00015671238,0.00026735835],"study_design_scores_gemma":[0.0008823913,0.000722201,0.16309513,0.00006025944,0.000042186643,0.00010670079,0.00011350877,0.000022008378,0.8340722,0.00025913044,0.00045693442,0.00016736996],"about_ca_topic_score_codex":0.00006710504,"about_ca_topic_score_gemma":0.0001267415,"teacher_disagreement_score":0.07747577,"about_ca_system_score_codex":0.00033076262,"about_ca_system_score_gemma":0.000043424698,"threshold_uncertainty_score":0.9999604},"labels":[],"label_agreement":null},{"id":"W2081398252","doi":"10.1007/s10532-005-9024-8","title":"Biodegradation kinetics of 2,4,6-Trichlorophenol by an acclimated mixed microbial culture under aerobic conditions","year":2006,"lang":"en","type":"article","venue":"Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo; Golder Associates (Canada)","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biodegradation; Chemistry; Aeration; Phenol; Microbial consortium; Biomass (ecology); Chromatography; Kinetics; Bioreactor; Activated sludge; Chlorophenol; Nuclear chemistry; Wastewater; Organic chemistry; Environmental engineering; Biology; Bacteria; Ecology; Microorganism","score_opus":0.00859886262667611,"score_gpt":0.2192697085261436,"score_spread":0.2106708458994675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081398252","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953486,0.000035765854,0.0023324755,0.0002943822,0.00023004788,0.0003309652,0.00055255165,0.000095369935,0.00077985896],"genre_scores_gemma":[0.9897442,0.000029530664,0.0021417632,0.00014062833,0.000049145645,0.000004900244,0.007231678,0.000016500022,0.00064168614],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99858963,0.00009153316,0.00044375838,0.00034623925,0.0002890814,0.0002397508],"domain_scores_gemma":[0.9993213,0.0000169338,0.0002987192,0.00023862241,0.000048982856,0.00007546484],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000111737645,0.00020051311,0.00016606264,0.00006857893,0.00011192742,0.00005281589,0.0002009868,0.00018816521,0.0013167339],"category_scores_gemma":[0.000016455848,0.00018087582,0.00005769717,0.0005257901,0.00017037384,0.00038529854,0.00004398536,0.000083278675,0.0002579966],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017790779,0.00033460322,0.0026081803,0.000005190028,0.000005587499,2.3656567e-7,0.00003921431,0.000106255764,0.9452362,0.00011213796,0.05105226,0.00048230842],"study_design_scores_gemma":[0.00068645505,0.00012229448,0.035677437,0.000008182742,0.000034428595,0.000003451276,0.00007563651,0.00030316974,0.9539823,0.00018815525,0.008644499,0.00027402432],"about_ca_topic_score_codex":0.00064961147,"about_ca_topic_score_gemma":0.00061925635,"teacher_disagreement_score":0.042407762,"about_ca_system_score_codex":0.00015807287,"about_ca_system_score_gemma":0.000010804211,"threshold_uncertainty_score":0.9995962},"labels":[],"label_agreement":null},{"id":"W2081572309","doi":"10.1016/j.jconhyd.2010.11.007","title":"Direct coupling of a genome-scale microbial in silico model and a groundwater reactive transport model","year":2010,"lang":"en","type":"article","venue":"Journal of Contaminant Hydrology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Pacific Northwest National Laboratory; Battelle","keywords":"Bioremediation; In silico; Biological system; Biochemical engineering; Environmental science; Microorganism; Groundwater; Chemistry; Environmental chemistry; Ecology; Contamination; Biology; Bacteria; Geology","score_opus":0.006222642740910934,"score_gpt":0.2041078851903516,"score_spread":0.19788524244944067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081572309","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987763,0.000016379105,0.00047338378,0.00018040373,0.000089239926,0.00010632478,0.000011597812,0.000002239103,0.00034411388],"genre_scores_gemma":[0.9988611,0.000057926274,0.000819987,0.00013046646,0.000022745693,6.988083e-7,0.0000014369109,0.000008213389,0.00009746952],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9989912,0.000015312622,0.0004975373,0.00015803722,0.00013199812,0.00020593787],"domain_scores_gemma":[0.9994669,0.000028478204,0.00030987913,0.000090609945,0.00002285582,0.00008130825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005173511,0.00011656893,0.0003533036,0.000089539455,0.000029399942,0.0000046570312,0.00014698195,0.00014995597,0.00009417272],"category_scores_gemma":[0.000012384793,0.00009097697,0.000068544774,0.000074419215,0.00021407679,0.00013440603,0.00003563773,0.00028785536,0.0000039667757],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024954177,0.00013301261,0.033832353,0.000004643025,0.000008852719,0.000016601192,0.00096196,0.012441589,0.9521972,0.0000048161796,0.000011036148,0.00013841949],"study_design_scores_gemma":[0.004595635,0.0008197945,0.2249435,0.00003885364,0.000117934134,0.0004514582,0.000108163746,0.47457752,0.2926696,0.00031157606,0.0008839569,0.00048202337],"about_ca_topic_score_codex":0.00011365983,"about_ca_topic_score_gemma":0.002533572,"teacher_disagreement_score":0.6595276,"about_ca_system_score_codex":0.000044777273,"about_ca_system_score_gemma":0.00003685102,"threshold_uncertainty_score":0.37099332},"labels":[],"label_agreement":null},{"id":"W2082005595","doi":"10.1016/j.colsurfb.2010.06.026","title":"Structural characterization of a rhamnolipid-type biosurfactant produced by Pseudomonas aeruginosa MR01: Enhancement of di-rhamnolipid proportion using gamma irradiation","year":2010,"lang":"en","type":"article","venue":"Colloids and Surfaces B Biointerfaces","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":124,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Rhamnolipid; Chemistry; Strain (injury); Pseudomonas aeruginosa; Thin-layer chromatography; Chromatography; Bacteria; Microbiology; Biology","score_opus":0.009531593154578374,"score_gpt":0.2238172224575119,"score_spread":0.21428562930293352,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082005595","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99812526,0.00006316622,0.000054689175,0.00013690664,0.000750747,0.0006459151,0.00012586522,0.000030235495,0.00006723949],"genre_scores_gemma":[0.9987739,0.00019127081,0.0007088998,0.000020197502,0.000033609158,0.0000027940152,0.00008695185,0.000017792658,0.00016458714],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980196,0.00006989898,0.0007081326,0.0004873361,0.00041164272,0.00030341576],"domain_scores_gemma":[0.9988106,0.000020697107,0.000690902,0.00026461715,0.00009579673,0.00011737989],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035257827,0.0002825412,0.0003823456,0.000075701704,0.00012721361,0.000052966414,0.00020052824,0.0001675481,0.00067373883],"category_scores_gemma":[0.000056294466,0.00023315373,0.00006058341,0.00040883565,0.0003764856,0.00039127507,0.00012775668,0.00014321622,0.000012741947],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010966366,0.0000786558,0.12992857,0.000053938893,0.000021860247,2.3485809e-7,0.00037535027,0.000023178842,0.8681372,0.000005386523,0.000054468102,0.0012115282],"study_design_scores_gemma":[0.00042214995,0.00024343331,0.07790854,0.000036216064,0.000026508898,0.0000032761109,0.0000725398,0.004336339,0.91628915,0.000007084559,0.0003977901,0.00025697632],"about_ca_topic_score_codex":0.00036109475,"about_ca_topic_score_gemma":0.00011748166,"teacher_disagreement_score":0.052020043,"about_ca_system_score_codex":0.000062616265,"about_ca_system_score_gemma":0.00004437001,"threshold_uncertainty_score":0.9507733},"labels":[],"label_agreement":null},{"id":"W2082042688","doi":"10.1007/s11356-014-3833-4","title":"Genetic determinants involved in the biodegradation of naphthalene and phenanthrene in Pseudomonas aeruginosa PAO1","year":2014,"lang":"en","type":"article","venue":"Environmental Science and Pollution Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Phenanthrene; Naphthalene; Pseudomonas aeruginosa; Microbiology; Mutant; Gene; Pseudomonas; Chemistry; Bacteria; Biology; Biochemistry; Genetics; Environmental chemistry; Organic chemistry","score_opus":0.024423003316714306,"score_gpt":0.2837807733782131,"score_spread":0.2593577700614988,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082042688","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988607,0.00007036133,0.0000059767185,0.00049250806,0.00002228746,0.00024109788,0.000007871215,0.0000019873967,0.00029718282],"genre_scores_gemma":[0.99929625,0.00042600543,0.00013227604,0.00010479707,0.000009104076,0.0000060605594,0.0000014936895,0.0000025305173,0.000021471002],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998168,0.00022923583,0.00020505022,0.00030890538,0.00076451345,0.00032431248],"domain_scores_gemma":[0.9996639,0.000054741977,0.0000472399,0.00015475343,0.000003427285,0.00007593183],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029653825,0.00007944857,0.00008924599,0.00014806227,0.00018566307,0.000032766577,0.00024882314,0.000046255278,0.00015441891],"category_scores_gemma":[0.000085907915,0.00005518912,0.000009980836,0.00064305414,0.0020696872,0.00021335193,0.00020034822,0.00012381304,0.000026729542],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011138709,0.000064873435,0.5017104,0.0000033290466,2.438664e-7,0.0000014158492,0.0004972749,0.000008574442,0.46414244,0.000015277468,0.000031818287,0.033513192],"study_design_scores_gemma":[0.00031340253,0.0000917809,0.9592684,0.000011299636,8.1442954e-7,0.000005367549,0.00050649134,0.0013008406,0.037888683,0.00012244537,0.0004199433,0.00007051695],"about_ca_topic_score_codex":0.0008051527,"about_ca_topic_score_gemma":0.0009942036,"teacher_disagreement_score":0.457558,"about_ca_system_score_codex":0.0001274446,"about_ca_system_score_gemma":0.000016268645,"threshold_uncertainty_score":0.76258487},"labels":[],"label_agreement":null},{"id":"W2082356887","doi":"10.1016/j.femsec.2004.01.011","title":"Two distinct gene clusters encode pyrene degradation in Mycobacterium sp. strain S65","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Agriculture and Agri-Food Canada; McGill University; National Research Council Canada; Biotechnology Research Institute","funders":"","keywords":"Dioxygenase; Fluoranthene; Phenanthrene; Pyrene; Biology; Biochemistry; Gene cluster; Gene; Genetics","score_opus":0.0087619478671931,"score_gpt":0.21846963477678247,"score_spread":0.20970768690958938,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082356887","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99657685,0.000015116644,0.00013181572,0.0010891587,0.0008308138,0.00032484808,0.00018998543,0.000047620975,0.00079380657],"genre_scores_gemma":[0.9959608,0.000025025844,0.0017354861,0.0012558051,0.00006292104,0.000010736316,0.0006771245,0.000015134222,0.00025696695],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982712,0.00015174272,0.00042913022,0.0005328766,0.00004423729,0.0005707752],"domain_scores_gemma":[0.99946034,0.000048237533,0.0001703592,0.00021849747,0.000009771241,0.000092794326],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003227137,0.000227405,0.00028085118,0.0000891111,0.00008892685,0.0000138949035,0.0002932736,0.0002845269,0.0026382941],"category_scores_gemma":[0.00005209823,0.00021178619,0.000059775703,0.00023666814,0.00039155135,0.00010575435,0.00019575914,0.00021391084,0.0015690686],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036994745,0.000115561204,0.11789706,0.0000021472367,0.000008048049,0.000020813106,0.00014181274,0.0002991368,0.8803681,0.000019916832,0.00044089303,0.00064950035],"study_design_scores_gemma":[0.003585665,0.0002960221,0.83642143,0.000009701023,0.000017962002,0.00019868709,0.00008431558,0.000033880875,0.15141812,0.00035118288,0.0070494437,0.000533618],"about_ca_topic_score_codex":0.0005259908,"about_ca_topic_score_gemma":0.02545761,"teacher_disagreement_score":0.72894996,"about_ca_system_score_codex":0.0005403859,"about_ca_system_score_gemma":0.00005044105,"threshold_uncertainty_score":0.99920833},"labels":[],"label_agreement":null},{"id":"W2082676290","doi":"10.1139/w99-131","title":"Biodegradation of carbazole by<i>Ralstonia</i>sp. RJGII.123 isolated from a hydrocarbon contaminated soil","year":2000,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Environmental Health Sciences; University of Florida","keywords":"Carbazole; Biodegradation; Bioremediation; Chemistry; Ralstonia; Environmental chemistry; Gas chromatography; Microbial biodegradation; Organic chemistry; Nuclear chemistry; Microorganism; Chromatography; Bacteria; Biology","score_opus":0.004293209689207778,"score_gpt":0.17014479470818317,"score_spread":0.1658515850189754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082676290","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975495,0.00040515215,0.00001302974,0.00049551594,0.00024118293,0.000085755,0.00046078145,0.0000053589306,0.0007437619],"genre_scores_gemma":[0.99864304,0.00009201197,0.00010007278,0.0005520233,0.000028236536,2.8623322e-7,0.00015439745,0.0000105791,0.00041932816],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988137,0.00011887873,0.0005201671,0.00017752264,0.000057236033,0.0003125129],"domain_scores_gemma":[0.9991893,0.000030115834,0.00031781176,0.00013322101,0.000033385746,0.00029612464],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018593467,0.00014946719,0.000292622,0.00008830704,0.00006365985,0.000013417593,0.00029421927,0.00020680086,0.008744348],"category_scores_gemma":[0.000023359331,0.00013270581,0.00008356797,0.00021201244,0.0002802744,0.000098124154,0.000011780821,0.00018352075,0.00029458193],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043677745,0.00002012923,0.013109849,0.0000013220226,0.000028828443,0.000016038819,0.00023758407,0.0000294494,0.962861,5.554393e-7,0.019946087,0.0037054748],"study_design_scores_gemma":[0.0021090538,0.00051458704,0.017482588,0.000061260274,0.00008102773,0.0002584157,0.00011037378,0.00020798724,0.77960896,0.00004484562,0.1990668,0.0004541037],"about_ca_topic_score_codex":0.034065798,"about_ca_topic_score_gemma":0.072841555,"teacher_disagreement_score":0.18325205,"about_ca_system_score_codex":0.00021995256,"about_ca_system_score_gemma":0.00017444495,"threshold_uncertainty_score":0.9921618},"labels":[],"label_agreement":null},{"id":"W2082804436","doi":"10.1016/j.microc.2005.01.009","title":"A multi-process phytoremediation system for decontamination of persistent total petroleum hydrocarbons (TPHs) from soils","year":2005,"lang":"en","type":"article","venue":"Microchemical Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":287,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Phytoremediation; Environmental remediation; Bioremediation; Environmental science; Soil water; Contamination; Soil contamination; Rhizobacteria; Environmental chemistry; Petroleum; Human decontamination; Agronomy; Chemistry; Waste management; Soil science; Rhizosphere; Biology; Ecology","score_opus":0.008781417878116869,"score_gpt":0.22452386746509645,"score_spread":0.21574244958697958,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082804436","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99663,0.00007397368,0.00250039,0.00023737973,0.00018844639,0.00014827527,0.00006444746,0.00001955035,0.00013751557],"genre_scores_gemma":[0.9940196,0.000010226367,0.0054604793,0.000080515005,0.0002982915,0.00000492429,0.00004769131,0.000012289029,0.00006596001],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987796,0.0000274434,0.0004476855,0.00022445989,0.0002753802,0.00024546057],"domain_scores_gemma":[0.99935955,0.000042734864,0.0003151294,0.00009444842,0.000034169945,0.00015397117],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020961922,0.0001424399,0.00019452405,0.000040275845,0.00009262256,0.000032409993,0.00019329444,0.00012242998,0.00015677417],"category_scores_gemma":[0.00005368273,0.00012623807,0.00024196577,0.00008135677,0.000068642796,0.00018095726,0.000037060017,0.00014711288,0.000086032764],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005931368,0.00012566953,0.0029325818,0.000012664225,0.000029725275,6.385062e-7,0.00043827159,0.00022329835,0.99329317,4.0843733e-7,0.00058478006,0.0022994638],"study_design_scores_gemma":[0.0018298879,0.00006515857,0.00424231,0.000050705567,0.00007131082,0.000048456634,0.0005639907,0.021801531,0.97056884,0.000006547723,0.0005564985,0.00019477506],"about_ca_topic_score_codex":0.000017060625,"about_ca_topic_score_gemma":0.000026090493,"teacher_disagreement_score":0.022724358,"about_ca_system_score_codex":0.00045027296,"about_ca_system_score_gemma":0.000025266148,"threshold_uncertainty_score":0.5147839},"labels":[],"label_agreement":null},{"id":"W2083545647","doi":"10.1007/s00253-003-1224-8","title":"Effects of aeration and organic loading rates on degradation of trichloroethylene in a methanogenic-methanotrophic coupled reactor","year":2003,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Biotechnology Research Institute","funders":"","keywords":"Trichloroethylene; Aeration; Chemistry; Environmental chemistry; Microcosm; Effluent; Methane monooxygenase; Volatilisation; Bioaugmentation; Methanotroph; Vinyl chloride; Degradation (telecommunications); Biodegradation; Bioreactor; Mineralization (soil science); Methane; Bioremediation; Environmental engineering; Anaerobic oxidation of methane; Organic chemistry; Environmental science; Bacteria; Biology","score_opus":0.004888310256862603,"score_gpt":0.19412805372557265,"score_spread":0.18923974346871006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083545647","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990762,0.00020029201,0.00015064998,0.00014881772,0.00004331055,0.0003121185,0.0000048495785,0.000014848418,0.000048940365],"genre_scores_gemma":[0.9985026,0.00052500784,0.0008440376,0.00009059676,0.0000022462712,0.0000051169104,0.000012937909,0.000005840026,0.000011634246],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991971,0.00007124713,0.0002611997,0.00028277494,0.00002771146,0.00015991395],"domain_scores_gemma":[0.9995487,0.00015438317,0.00016831314,0.000101808175,0.000006227873,0.000020574105],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024898796,0.00012535762,0.0002588555,0.00013466491,0.000026388072,0.0000022019976,0.000070220805,0.0004235124,0.00007225356],"category_scores_gemma":[0.000112969996,0.000104772225,0.000016122338,0.00031840394,0.00034713082,0.000024406076,0.000047666643,0.00014004481,0.0000104029905],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000072862895,0.00006897233,0.0022594086,0.00002116523,0.000011249074,8.3143647e-7,0.00005005217,6.874923e-7,0.99509346,0.0010021041,0.000007621369,0.0014115687],"study_design_scores_gemma":[0.0009192096,0.0001889378,0.0031760763,0.000009866557,0.0000150053065,0.00000827058,0.000037905615,0.0000075069534,0.9952313,0.00018445686,0.00012408184,0.00009738446],"about_ca_topic_score_codex":0.000021938371,"about_ca_topic_score_gemma":0.000093479364,"teacher_disagreement_score":0.0013141843,"about_ca_system_score_codex":0.000031827778,"about_ca_system_score_gemma":0.000009476581,"threshold_uncertainty_score":0.42724875},"labels":[],"label_agreement":null},{"id":"W2083644326","doi":"10.1007/s11274-005-5452-1","title":"Trinitrotoluene removal in a soil slurry and soil box systems by an oil-degrading mixed bacterial culture","year":2006,"lang":"en","type":"article","venue":"World Journal of Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Bioremediation; Trinitrotoluene; Biodegradation; Biotransformation; Environmental chemistry; Bioavailability; Slurry; Soil contamination; Chemistry; Enrichment culture; Soil water; Soil microbiology; Contamination; Environmental science; Environmental engineering; Bacteria; Biology; Soil science; Ecology","score_opus":0.0048928316794108915,"score_gpt":0.19148084101909907,"score_spread":0.18658800933968817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083644326","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968941,0.0012933476,0.000011246264,0.0011073302,0.0003965468,0.00007649982,0.000046590034,0.000020439918,0.00015388244],"genre_scores_gemma":[0.99808615,0.0006499405,0.0004905878,0.00012163343,0.000094781615,0.0000010798012,0.00003016325,0.000008576063,0.00051706657],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986562,0.00016184179,0.0005335282,0.00028182814,0.00004927677,0.00031732663],"domain_scores_gemma":[0.9994358,0.00002756347,0.00034528488,0.00010883915,0.00001372671,0.000068828005],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045085768,0.00018993985,0.00038151524,0.00019888392,0.0001053085,0.000029660354,0.00020523011,0.0004928643,0.00007609931],"category_scores_gemma":[0.000024006686,0.00014428426,0.000040687242,0.00026215726,0.0004652838,0.00012913068,0.00010541824,0.00043836742,0.000009153252],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016136568,0.00008823108,0.0058091413,0.000008327077,0.000011618993,0.000050957507,0.000042004503,0.0000071949557,0.9871162,0.000059654085,0.0039173695,0.0027279048],"study_design_scores_gemma":[0.0038341237,0.00058090786,0.00307631,0.00007876506,0.000039206305,0.0048205066,0.0002539054,0.000049842263,0.77092487,0.00013605665,0.21574232,0.00046321147],"about_ca_topic_score_codex":0.00021339695,"about_ca_topic_score_gemma":0.0021652023,"teacher_disagreement_score":0.2161914,"about_ca_system_score_codex":0.000076179356,"about_ca_system_score_gemma":0.000015599124,"threshold_uncertainty_score":0.58837414},"labels":[],"label_agreement":null},{"id":"W2084313429","doi":"10.1016/j.scitotenv.2014.10.002","title":"Natural attenuation of 1,2,4-trichlorobenzene in shallow aquifer at the Luhuagang's landfill site, Kaifeng, China","year":2014,"lang":"en","type":"article","venue":"The Science of The Total Environment","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"GDG Environnement","funders":"Jilin University; U.S. Environmental Protection Agency","keywords":"Biostimulation; Aquifer; Bioremediation; Environmental science; Environmental chemistry; Bioaugmentation; Leachate; Attenuation; Environmental engineering; Microorganism; Contamination; Biodegradation; Silt; Subsoil; Groundwater; Soil science; Chemistry; Ecology; Geology; Geotechnical engineering; Soil water; Biology","score_opus":0.00417062104965904,"score_gpt":0.18159567070518032,"score_spread":0.17742504965552128,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084313429","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951097,0.0000408973,0.000005400349,0.0021554814,0.00020196346,0.0002960876,0.0000095059695,0.0000047228086,0.002176269],"genre_scores_gemma":[0.9982468,0.000022705342,0.00004650461,0.00009869532,0.000020506459,0.0000030815572,0.000002128134,0.0000055541286,0.0015540395],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982763,0.00012091016,0.0002815637,0.00026046677,0.00079776056,0.0002629813],"domain_scores_gemma":[0.99909663,0.00006222532,0.00023490388,0.0005590359,0.0000040006576,0.000043217406],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0014296789,0.00012587232,0.0001288696,0.000027495707,0.00023202063,0.000014172071,0.00082511024,0.000035792287,0.0010277025],"category_scores_gemma":[0.00007985454,0.00005676539,0.00007638824,0.00039558162,0.0013526605,0.00013729179,0.00079205533,0.00013202426,0.0002330852],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024057746,0.000065047374,0.008901041,0.0000028038285,0.0000031640877,1.2359024e-7,0.00085099856,0.018504722,0.969836,0.000033858614,0.00026469142,0.0015134854],"study_design_scores_gemma":[0.00025671904,0.000039655006,0.8307992,0.000009656472,0.000010280811,0.0000041842004,0.00004558538,0.005447694,0.16301003,0.000064527165,0.00021803357,0.00009441461],"about_ca_topic_score_codex":0.00031161436,"about_ca_topic_score_gemma":0.000098276454,"teacher_disagreement_score":0.82189816,"about_ca_system_score_codex":0.00022703182,"about_ca_system_score_gemma":0.000010616444,"threshold_uncertainty_score":0.9998855},"labels":[],"label_agreement":null},{"id":"W2084595074","doi":"10.1016/j.chemosphere.2007.01.052","title":"PAH removal from spiked municipal wastewater sewage sludge using biological, chemical and electrochemical treatments","year":2007,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":92,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Chemistry; Environmental chemistry; Sewage sludge; Biodegradation; Leaching (pedology); Bioavailability; Sewage treatment; Soil water; Environmental engineering; Environmental science; Organic chemistry","score_opus":0.019572174174610425,"score_gpt":0.23729169869234307,"score_spread":0.21771952451773263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084595074","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997709,0.00007376297,0.000029924742,0.000055362467,0.000056367855,0.00014172787,0.000015463771,0.000048153666,0.0018702571],"genre_scores_gemma":[0.9916408,0.000030014568,0.007625382,0.00029760142,0.00007629151,8.3671495e-7,0.00007413244,0.000013811104,0.00024115246],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99871075,0.000019278681,0.00024223138,0.00044121925,0.00016156587,0.00042492402],"domain_scores_gemma":[0.9994943,0.000036507055,0.000068658526,0.00020422213,0.0000052663395,0.00019104818],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013141852,0.00020941178,0.00019828745,0.0000047780363,0.000070412454,0.000027842043,0.00016878788,0.00023400769,0.003778833],"category_scores_gemma":[0.000028591834,0.00015836395,0.000056351466,0.00012740261,0.00022643532,0.0000779549,0.00020062953,0.00014420085,0.00020033741],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007698166,0.00008261674,0.017477829,0.0000013906143,0.00001408869,0.00002468572,0.00014454713,2.2440987e-7,0.9799856,6.971311e-7,0.0003122684,0.0018790765],"study_design_scores_gemma":[0.00068548735,0.00003203985,0.0067085796,0.0000072240623,0.000019032701,0.000027873217,0.0000955021,0.00011574158,0.98894256,0.000051092906,0.0030942485,0.00022064168],"about_ca_topic_score_codex":0.00020557652,"about_ca_topic_score_gemma":0.000030278588,"teacher_disagreement_score":0.010769251,"about_ca_system_score_codex":0.00017838183,"about_ca_system_score_gemma":0.0000058815453,"threshold_uncertainty_score":0.9971318},"labels":[],"label_agreement":null},{"id":"W2084933342","doi":"10.1139/w03-008","title":"Phylogenetic analysis of bacterial populations in an anaerobic microbial consortium capable of degrading saturation concentrations of tetrachloroethylene","year":2003,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Tetrachloroethylene; Microbial population biology; Temperature gradient gel electrophoresis; Biology; Burkholderia; Bacteria; Chemistry; Environmental chemistry; 16S ribosomal RNA; Trichloroethylene","score_opus":0.022860446993989092,"score_gpt":0.23779943828889558,"score_spread":0.21493899129490648,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084933342","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990404,0.00012270581,0.00006594799,0.00003351844,0.00029356405,0.0001102079,0.000271372,8.9969757e-7,0.000061368184],"genre_scores_gemma":[0.9979526,0.000015471995,0.0018660664,0.000031637253,0.000012809298,2.899666e-7,0.00010574363,0.0000053798803,0.000010012198],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99848753,0.00022724141,0.00087087246,0.00013948017,0.000049374692,0.00022548194],"domain_scores_gemma":[0.9988894,0.000036317368,0.00068576576,0.00013673985,0.00009194569,0.00015984707],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00035351206,0.000107138505,0.00041327364,0.0004493328,0.00004271584,0.0000071394275,0.00017611864,0.00013905337,0.0019521684],"category_scores_gemma":[0.00011542676,0.000103872306,0.000117724405,0.00075208454,0.00035527005,0.00010938823,0.000006812647,0.000105009,0.0000020772002],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000149094485,0.000034986362,0.23996267,0.0000032659611,0.000046461228,0.0000019100828,0.00041096765,0.001589301,0.75770915,0.0000657098,0.00008120501,0.0000794968],"study_design_scores_gemma":[0.0007235825,0.00021488414,0.34990838,0.000019755671,0.00024294184,0.000030931005,0.00023056041,0.00004880559,0.64784104,0.000024338879,0.0005701427,0.0001446391],"about_ca_topic_score_codex":0.0040914295,"about_ca_topic_score_gemma":0.25414085,"teacher_disagreement_score":0.2500494,"about_ca_system_score_codex":0.0001670666,"about_ca_system_score_gemma":0.00032365057,"threshold_uncertainty_score":0.9989602},"labels":[],"label_agreement":null},{"id":"W2085333262","doi":"10.1007/s00284-008-9157-1","title":"Enhanced Biodegradation of Anthracene in Acidic Soil by Inoculated Burkholderia sp. VUN10013","year":2008,"lang":"en","type":"article","venue":"Current Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Royal Golden Jubilee (RGJ) Ph.D. Programme; Thailand Research Fund","keywords":"Anthracene; Soil water; Incubation; Burkholderia; Microcosm; Biodegradation; Microorganism; Chemistry; Inoculation; Environmental chemistry; Soil microbiology; Microbiology; Biology; Bacteria; Horticulture; Organic chemistry; Ecology; Biochemistry","score_opus":0.015247155048051679,"score_gpt":0.23284929532000553,"score_spread":0.21760214027195385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085333262","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99845797,0.00042443047,0.00012851217,0.000114829934,0.00041451957,0.00019368321,0.000098180964,0.000022425493,0.00014546777],"genre_scores_gemma":[0.99856776,0.00075527135,0.00007801941,0.00005831066,0.00001323441,0.0000029870748,0.0004427047,0.0000074186896,0.00007428139],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99885654,0.00009051205,0.00038878646,0.00032765453,0.00005747584,0.00027905594],"domain_scores_gemma":[0.9995705,0.000017986882,0.00018101478,0.00016507284,0.00001335639,0.000052066458],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00011854615,0.00015414404,0.00022909479,0.00006166007,0.0000475689,0.000003391085,0.00018679065,0.00013869483,0.0020020336],"category_scores_gemma":[0.000027250439,0.00013757472,0.000046178782,0.00033362018,0.00049663306,0.00008921257,0.00009508454,0.00012771104,0.00044553142],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022446002,0.00017089534,0.01837928,0.000006585221,0.0000036112249,8.730608e-7,0.00017534819,0.000011894796,0.97137713,0.000001924921,0.0074179783,0.0024320267],"study_design_scores_gemma":[0.00069538114,0.000047986305,0.0143390475,0.000015568567,0.000003628032,0.000011067898,0.000015807509,0.00003295421,0.97718316,0.0000048344746,0.007487396,0.00016316783],"about_ca_topic_score_codex":0.00014517985,"about_ca_topic_score_gemma":0.00015565383,"teacher_disagreement_score":0.0058060247,"about_ca_system_score_codex":0.00009647546,"about_ca_system_score_gemma":0.000019490972,"threshold_uncertainty_score":0.99891025},"labels":[],"label_agreement":null},{"id":"W2085740765","doi":"10.1007/s00253-011-3589-4","title":"Influence of adhesion on aerobic biodegradation and bioremediation of liquid hydrocarbons","year":2011,"lang":"en","type":"review","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":109,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biodegradation; Bioremediation; Hydrocarbon; Chemistry; Population; Environmental chemistry; Bacterial growth; Adhesion; Substrate (aquarium); Microorganism; Bacteria; Chemical engineering; Organic chemistry; Ecology; Biology","score_opus":0.013556068244957923,"score_gpt":0.22437164141768856,"score_spread":0.21081557317273064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085740765","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6375463,0.3610219,0.00000835552,0.000062413164,0.000077747885,0.000899773,0.00012005491,0.000060398157,0.00020305836],"genre_scores_gemma":[0.17368586,0.8258376,0.00025799495,0.000046344852,0.000006903747,0.000010142977,0.00013327306,0.000012708109,0.000009134938],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985577,0.00006485972,0.00059588184,0.00052355917,0.000038329526,0.0002196718],"domain_scores_gemma":[0.99890184,0.00007751272,0.0006877544,0.00028523526,0.0000068060745,0.00004083964],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00020908791,0.00031367983,0.00085938093,0.00024758003,0.00004857285,0.0000021921858,0.00024004612,0.0014418472,0.000045875593],"category_scores_gemma":[0.000032792872,0.00023777939,0.000067509965,0.00033013546,0.0012322507,0.000028358645,0.00025303647,0.0002953247,0.0000630416],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058712016,0.000071075716,0.000036269033,0.0004967761,0.000037398804,4.9882095e-7,0.00003751422,2.7669984e-7,0.85555613,0.0010902331,0.0000669258,0.14254819],"study_design_scores_gemma":[0.0005469563,0.0011800211,0.00018608948,0.0009470387,0.00034417663,0.00006747461,0.000018292383,7.3743126e-7,0.6022859,0.00016843615,0.39362702,0.0006278261],"about_ca_topic_score_codex":0.000034994213,"about_ca_topic_score_gemma":0.000029111405,"teacher_disagreement_score":0.4648157,"about_ca_system_score_codex":0.00003604895,"about_ca_system_score_gemma":0.000024084271,"threshold_uncertainty_score":0.9998545},"labels":[],"label_agreement":null},{"id":"W2085891894","doi":"10.1139/s03-017","title":"Polycyclic aromatic hydrocarbon degradation in soil surrounding an outdoor coal storage pile","year":2003,"lang":"en","type":"article","venue":"Journal of Environmental Engineering and Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Microcosm; Environmental chemistry; Naphthalene; Mineralization (soil science); Transect; Polycyclic aromatic hydrocarbon; Soil water; Coal; Environmental science; Hydrocarbon; Leachate; Pile; Chemistry; Soil science; Geology; Geotechnical engineering; Organic chemistry","score_opus":0.006794703328866937,"score_gpt":0.19156559775535106,"score_spread":0.18477089442648412,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085891894","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99925464,0.00005120688,0.00023344636,0.00001959475,0.00019523603,0.00004814522,0.0000010138297,0.000005344815,0.00019134728],"genre_scores_gemma":[0.9988579,0.000047038557,0.0009964007,0.000029997198,0.000013991671,3.5997297e-7,5.6429957e-7,0.0000061116766,0.000047649155],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99895763,0.000027689091,0.00027198237,0.00015980685,0.00036663414,0.00021625074],"domain_scores_gemma":[0.9996027,0.000021064778,0.000120684774,0.000085064625,4.3207973e-7,0.00017005976],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00082673354,0.00010214017,0.000120826924,0.000115411225,0.000070780785,0.00004832292,0.00015094111,0.000033669603,0.00006768009],"category_scores_gemma":[0.00006216227,0.00008919883,0.00002324976,0.00019220481,0.00016249092,0.00064296543,0.000029590052,0.00012982247,0.000011645827],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000048567395,0.0000723647,0.050304115,0.0000015933161,0.0000013191823,0.000008822486,0.00026172973,0.0047219503,0.9439294,0.000003969295,0.000005449066,0.0006844795],"study_design_scores_gemma":[0.0010181621,0.00034338003,0.878142,0.000051795396,0.000013162625,0.00026210595,0.0005302014,0.036882497,0.08146914,0.000048991587,0.00085149315,0.00038706377],"about_ca_topic_score_codex":0.000015360763,"about_ca_topic_score_gemma":0.00001029856,"teacher_disagreement_score":0.8624602,"about_ca_system_score_codex":0.00027013684,"about_ca_system_score_gemma":0.000013503294,"threshold_uncertainty_score":0.3637423},"labels":[],"label_agreement":null},{"id":"W2085997659","doi":"10.1016/j.jconhyd.2005.12.006","title":"Anaerobic degradation of naphthalene in a fluvial aquifer: A radiotracer study","year":2006,"lang":"en","type":"article","venue":"Journal of Contaminant Hydrology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo; University of British Columbia","funders":"National Science Council; Ministerio del Ambiente, Agua y Transición Ecológica","keywords":"Aquifer; Fluvial; Degradation (telecommunications); Naphthalene; Environmental science; Anaerobic exercise; Groundwater; Environmental chemistry; Geology; Hydrology (agriculture); Soil science; Geochemistry; Mineralogy; Chemistry; Geomorphology; Geotechnical engineering","score_opus":0.005822991683116817,"score_gpt":0.21818705413709177,"score_spread":0.21236406245397496,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085997659","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990021,0.00006927331,0.00006014273,0.00018268594,0.0002035836,0.0001636116,0.0000025373647,0.0000024658186,0.00031361557],"genre_scores_gemma":[0.99947536,0.000023270624,0.00023221278,0.00004788721,0.00005091931,4.8880406e-7,0.0000015266312,0.0000052398755,0.00016307889],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99864167,0.00017082061,0.00067469024,0.00011968715,0.00022046012,0.00017268205],"domain_scores_gemma":[0.99930567,0.000047888323,0.000494167,0.00009247712,0.000020436468,0.00003937787],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006599065,0.00009644974,0.0003015859,0.0001310367,0.00002189608,0.000005238395,0.00016522476,0.000078850324,0.00045494342],"category_scores_gemma":[0.000033708526,0.000075129115,0.0000648152,0.00020536661,0.000093174036,0.00014159859,0.00003491504,0.00013904175,0.000020935375],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021170337,0.0006415505,0.49787626,0.0000024176288,0.00001178292,0.000104234925,0.00035184712,0.0002563407,0.49853912,0.00001041376,0.0003772268,0.0016171027],"study_design_scores_gemma":[0.0028181395,0.0014413841,0.970285,0.0000117924155,0.00003150655,0.00018845053,0.00017043539,0.00024604084,0.023325967,0.000050670358,0.0013174427,0.00011318098],"about_ca_topic_score_codex":0.00053767936,"about_ca_topic_score_gemma":0.0026512682,"teacher_disagreement_score":0.47521314,"about_ca_system_score_codex":0.0001011355,"about_ca_system_score_gemma":0.000024139636,"threshold_uncertainty_score":0.49813116},"labels":[],"label_agreement":null},{"id":"W2086065790","doi":"10.1021/es5003023","title":"Mechanisms of Toxicity of Hydroxylated Polybrominated Diphenyl Ethers (HO-PBDEs) Determined by Toxicogenomic Analysis with a Live Cell Array Coupled with Mutagenesis in <i>Escherichia coli</i>","year":2014,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Purdue University","keywords":"Polybrominated diphenyl ethers; Chemistry; Toxicity; Escherichia coli; Toxicogenomics; Mutagenesis; Cytotoxicity; Environmental chemistry; Diphenyl ether; Stereochemistry; Operon; Gene; Biochemistry; Mutation; Gene expression; In vitro; Pollutant; Organic chemistry","score_opus":0.002178365543211855,"score_gpt":0.1662356890528401,"score_spread":0.16405732350962826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2086065790","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99681354,0.000012659811,0.0023980062,0.000070933456,0.000016006716,0.00038878943,0.000042323823,0.000037680336,0.00022008784],"genre_scores_gemma":[0.99697816,0.000015898626,0.0028280166,0.000078731544,0.0000012235732,0.000011417242,0.000012282432,0.000017001303,0.000057293375],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978029,0.00006705428,0.00042773844,0.00068875356,0.00051344576,0.00050010835],"domain_scores_gemma":[0.99894035,0.000032388463,0.00043599439,0.00045478888,0.00000604332,0.00013042997],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004859427,0.00027436827,0.0004707591,0.00038067697,0.00010649955,0.0000113026135,0.0007200613,0.00019006256,0.0008334712],"category_scores_gemma":[0.000016600918,0.0002158225,0.000060076956,0.0028835083,0.0026095514,0.00016875211,0.00018157055,0.00015719578,0.000038402573],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009599893,0.00038975765,0.0442016,0.0000037169707,0.0000263094,0.0000025020195,0.00022859564,0.001215883,0.95354855,0.0000035768812,0.0000021254461,0.00028135482],"study_design_scores_gemma":[0.00084503205,0.000841213,0.024366299,0.000009167221,0.00009105163,0.000002771325,0.00042150856,0.0039804163,0.9691172,0.00002750112,0.00002433631,0.00027346882],"about_ca_topic_score_codex":0.0003208884,"about_ca_topic_score_gemma":0.00045928746,"teacher_disagreement_score":0.0198353,"about_ca_system_score_codex":0.00036023968,"about_ca_system_score_gemma":0.000027712793,"threshold_uncertainty_score":0.96150005},"labels":[],"label_agreement":null},{"id":"W2086573684","doi":"10.1016/j.jhazmat.2010.08.067","title":"Phylogenetic and functional diversity of alkane degrading bacteria associated with Italian ryegrass (Lolium multiflorum) and Birdsfoot trefoil (Lotus corniculatus) in a petroleum oil-contaminated environment","year":2010,"lang":"en","type":"article","venue":"Journal of Hazardous Materials","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":144,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Helmholtz Zentrum München; University of Saskatchewan","keywords":"Lotus corniculatus; Biology; Lolium multiflorum; Rhizosphere; Bacteria; Botany; Phytoremediation; AlkB; Ecology; Gene; Genetics; Contamination","score_opus":0.00732697397785912,"score_gpt":0.17366209440804817,"score_spread":0.16633512043018905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2086573684","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99939704,0.000021340287,0.0000038510652,0.0000833537,0.00030756943,0.00007411289,0.00006733213,0.000005888544,0.00003952893],"genre_scores_gemma":[0.9995185,0.00007476325,0.00023481129,0.00003428748,0.000032248496,8.2557034e-7,0.00001000659,0.0000119122205,0.00008263786],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99867594,0.000111189314,0.00046921553,0.00019972624,0.0003132189,0.00023070708],"domain_scores_gemma":[0.9991277,0.000043030384,0.0005786465,0.00009464735,0.000020493828,0.00013551266],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00060110964,0.00017907262,0.00038660868,0.000095179734,0.000090609974,0.000041488012,0.000106351465,0.00012321069,0.00096163474],"category_scores_gemma":[0.000054601212,0.00013308322,0.00003729335,0.000078561185,0.00023138606,0.00013962685,0.00017289072,0.00013904809,0.000007733664],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002293146,0.00011319495,0.23424757,0.000009192861,0.000033376207,0.00002637124,0.00015774251,0.000018392228,0.76467067,6.340141e-7,0.00002509406,0.00046846256],"study_design_scores_gemma":[0.0017383869,0.000232293,0.8165126,0.000041258372,0.000047426936,0.00008869222,0.00007483373,0.000026404046,0.18100649,0.0000064989563,0.00008703405,0.00013807812],"about_ca_topic_score_codex":0.00018542186,"about_ca_topic_score_gemma":0.0004690255,"teacher_disagreement_score":0.5836642,"about_ca_system_score_codex":0.000110784196,"about_ca_system_score_gemma":0.000016559372,"threshold_uncertainty_score":0.9999516},"labels":[],"label_agreement":null},{"id":"W2087606790","doi":"10.1021/es991179k","title":"Carbon Isotope Fractionation during Microbial Dechlorination of Trichloroethene, <i>cis</i>-1,2-Dichloroethene, and Vinyl Chloride:  Implications for Assessment of Natural Attenuation","year":2000,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":220,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Waterloo","funders":"","keywords":"Chemistry; Reductive dechlorination; Fractionation; Vinyl chloride; Isotopes of carbon; Environmental chemistry; Isotope fractionation; Carbon fibers; Biodegradation; Organic chemistry; Total organic carbon","score_opus":0.007061409278356924,"score_gpt":0.24576266021306234,"score_spread":0.23870125093470543,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2087606790","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99747914,0.000031480828,0.00023046554,0.00083886844,0.00011721654,0.0006266309,0.000055454293,0.000039628267,0.0005811227],"genre_scores_gemma":[0.99745274,0.0001984471,0.002035046,0.0000402887,0.000020832365,0.00004186445,0.00002743695,0.000011274582,0.0001720603],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984207,0.000019422301,0.0004438209,0.00049446913,0.00032904642,0.00029253698],"domain_scores_gemma":[0.99929386,0.00004366407,0.0003084485,0.00027325525,0.000018960583,0.0000618086],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004079221,0.0001634675,0.00019940686,0.00029067445,0.0002538295,0.000014335486,0.00034483947,0.00013464972,0.0003607328],"category_scores_gemma":[0.000048855625,0.00016013236,0.000047578917,0.00088001875,0.0012398456,0.00037862264,0.00014213515,0.00012793305,0.000007895532],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040707968,0.00011586515,0.064737774,0.0000062337813,0.0000049895434,1.0116408e-7,0.000072944014,0.0001487535,0.9171343,0.00014933832,0.0000067313285,0.01758228],"study_design_scores_gemma":[0.00051359733,0.0001032635,0.46362066,0.000006489938,0.000014015082,0.000009198656,0.00005978141,0.0006762428,0.5340238,0.0003495557,0.00049804855,0.00012531677],"about_ca_topic_score_codex":0.000058798134,"about_ca_topic_score_gemma":0.00003441194,"teacher_disagreement_score":0.3988829,"about_ca_system_score_codex":0.00046380964,"about_ca_system_score_gemma":0.000030349462,"threshold_uncertainty_score":0.6530008},"labels":[],"label_agreement":null},{"id":"W2087843074","doi":"10.2118/137211-pa","title":"Surfactant Enhanced Biodegradation of Petroleum Hydrocarbons in Oil Refinery Tank Bottom Sludge","year":2010,"lang":"en","type":"article","venue":"Journal of Canadian Petroleum Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Northern British Columbia","funders":"","keywords":"Biodegradation; Petroleum; Hydrocarbon; Bioremediation; Oil refinery; Pollutant; Oil sludge; Chemistry; Environmental chemistry; Waste management; Total petroleum hydrocarbon; Pulp and paper industry; Petroleum product; Environmental science; Contamination; Organic chemistry","score_opus":0.0051367820640463285,"score_gpt":0.19455980186265973,"score_spread":0.1894230197986134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2087843074","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98795044,0.000051561765,0.000017475475,0.006631747,0.00047123863,0.00003070239,0.000027178003,0.000015508404,0.0048041274],"genre_scores_gemma":[0.9978973,0.00019357812,0.0013690788,0.00016979696,0.000036318932,0.0000012154463,0.0000047895483,0.000014440663,0.00031343676],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99825615,0.000039694543,0.0007464303,0.00021123793,0.00030708226,0.0004394309],"domain_scores_gemma":[0.9988129,0.000031530013,0.0005785973,0.0002894972,0.00002617537,0.00026125647],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005170948,0.00017442291,0.00036845604,0.0017721613,0.00004910786,0.000014692744,0.0005140926,0.00039059625,0.0005775714],"category_scores_gemma":[0.00022027093,0.0001573457,0.00009390526,0.0011597862,0.00029014063,0.0001828954,0.000046162553,0.00084125734,0.000059743055],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026480147,0.00004955253,0.043505754,0.0000032661903,0.000011165289,0.000039464634,0.000035595633,0.00002314459,0.9489736,0.0001336343,0.0010290615,0.006169259],"study_design_scores_gemma":[0.0028192387,0.00067563506,0.111717224,0.00009209774,0.000054083306,0.00040359292,0.0003303315,0.00062376884,0.7419098,0.0010385063,0.13962911,0.00070658245],"about_ca_topic_score_codex":0.015399944,"about_ca_topic_score_gemma":0.4567018,"teacher_disagreement_score":0.44130185,"about_ca_system_score_codex":0.00032258988,"about_ca_system_score_gemma":0.00028320594,"threshold_uncertainty_score":0.9911566},"labels":[],"label_agreement":null},{"id":"W2088450512","doi":"10.1139/w07-052","title":"Microbial surfactant activities from a petrochemical landfarm in a humid tropical region of Brazil","year":2007,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Fundação de Amparo à Pesquisa do Estado da Bahia; Universidade Estadual de Santa Cruz; Conselho Nacional de Desenvolvimento Científico e Tecnológico","keywords":"Pulmonary surfactant; Microorganism; Bioremediation; Petrochemical; Petroleum; Contamination; Soil contamination; Tropics; Environmental science; Environmental chemistry; Chemistry; Biology; Bacteria; Ecology; Environmental engineering; Biochemistry","score_opus":0.008152728989081691,"score_gpt":0.2060145767328722,"score_spread":0.1978618477437905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088450512","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987429,0.00010369528,0.00005974859,0.0003419137,0.0003270417,0.00006366846,0.00006317718,0.0000023764862,0.00029550534],"genre_scores_gemma":[0.9991134,0.000020597607,0.00037235764,0.00033918564,0.00008289195,1.04632896e-7,0.000014349285,0.000008169278,0.00004897334],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987481,0.000075663556,0.00056827394,0.00016449593,0.00005548509,0.0003879339],"domain_scores_gemma":[0.9992148,0.000096470976,0.00028563436,0.000107723274,0.000020332249,0.0002750197],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002552969,0.00013065728,0.00031990657,0.00016479753,0.000033718487,0.000009191175,0.0002767965,0.00021423466,0.0011414324],"category_scores_gemma":[0.00008139631,0.00011343369,0.000100637044,0.00016866716,0.00039810932,0.00007366892,0.00002942082,0.00028630786,0.000027160215],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011786979,0.000026272546,0.21209095,0.0000018784599,0.0000104530045,0.00014977445,0.00032316602,0.0000031225456,0.7845168,0.0000048935763,0.002416701,0.00033808325],"study_design_scores_gemma":[0.0017251337,0.00023857718,0.25973722,0.00006103865,0.000019558285,0.0007847265,0.0003110747,0.0000016953259,0.7110935,0.0000719101,0.025691954,0.00026360084],"about_ca_topic_score_codex":0.0066086664,"about_ca_topic_score_gemma":0.16151185,"teacher_disagreement_score":0.15490319,"about_ca_system_score_codex":0.00036630526,"about_ca_system_score_gemma":0.00021848235,"threshold_uncertainty_score":0.99977165},"labels":[],"label_agreement":null},{"id":"W2088711876","doi":"10.1061/41072(359)56","title":"Numerical Simulation for Biosurfactant-Enhanced Bioremediation Process under Cold Climate and Low Soil-Permeability Conditions: A Pilot-Scale Case Study","year":2009,"lang":"en","type":"article","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Regina","funders":"","keywords":"Bioremediation; Environmental remediation; Environmental science; Biodegradation; Rhamnolipid; Contamination; Microcosm; Waste management; Petroleum; Petroleum engineering; Environmental engineering; Environmental chemistry; Chemistry; Engineering; Geology; Ecology","score_opus":0.018035566989391693,"score_gpt":0.2963560669804073,"score_spread":0.2783204999910156,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088711876","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948468,0.0000031305321,0.0024867393,0.00027206342,0.00007807279,0.0019615898,0.000067802226,0.000107938686,0.0001758633],"genre_scores_gemma":[0.99899095,0.000006495503,0.00031662325,0.00054827967,0.000029313836,0.000033373748,0.000036827118,0.000010450526,0.000027693839],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99845016,0.00006873114,0.00040635114,0.00050523033,0.00025238245,0.0003171557],"domain_scores_gemma":[0.99934065,0.00012784995,0.0001465818,0.00018580153,0.00004627327,0.00015284367],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035549104,0.00019635487,0.00019830643,0.00003903874,0.00029346446,0.000066862136,0.000083257015,0.00007991545,0.0004945867],"category_scores_gemma":[0.00006467619,0.00016460285,0.00004112885,0.00028312247,0.0001075077,0.00037326285,0.000026635356,0.00007388045,0.00006071176],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041391634,0.0032635531,0.08909862,0.00005244524,0.00002150777,0.0000192899,0.0019744243,0.026673013,0.8758469,0.000022185006,0.00017689784,0.0024372523],"study_design_scores_gemma":[0.012467165,0.0051590777,0.45459664,0.000035633795,0.00015848965,0.000079486745,0.006884346,0.24839269,0.2696573,0.000959059,0.00006086757,0.0015492508],"about_ca_topic_score_codex":0.00008876527,"about_ca_topic_score_gemma":0.0004399372,"teacher_disagreement_score":0.6061896,"about_ca_system_score_codex":0.00012303561,"about_ca_system_score_gemma":0.000016861375,"threshold_uncertainty_score":0.671231},"labels":[],"label_agreement":null},{"id":"W2089034491","doi":"10.2202/1542-6580.1027","title":"Transport and Reaction Processes in Bioremediation of Organic Contaminants. 1. Review of Bacterial Degradation and Transport","year":2003,"lang":"en","type":"article","venue":"International Journal of Chemical Reactor Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Syncrude","keywords":"Bioremediation; Chemistry; Environmental chemistry; Biodegradation; Adsorption; Biotransformation; Solubility; Pollutant; Contamination; Degradation (telecommunications); Organic chemistry; Ecology","score_opus":0.0058251927207520066,"score_gpt":0.20445164404127059,"score_spread":0.1986264513205186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089034491","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992591,0.00034361653,0.00010767055,0.000055451317,0.00013113892,0.000058348367,0.000007645121,0.000002231864,0.00003476499],"genre_scores_gemma":[0.99542683,0.0041257464,0.0003925128,0.000013482542,0.000021376538,4.0765912e-7,0.000013796037,0.0000048696247,9.591777e-7],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991561,0.0000079685815,0.00045898205,0.00007377197,0.00024694446,0.0000562256],"domain_scores_gemma":[0.9995512,0.00004180925,0.00026638398,0.000028624783,0.000070698436,0.000041324354],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023477343,0.00006826771,0.00016503692,0.000055771823,0.0000013281453,0.0000021220985,0.00006607305,0.000045880486,0.00009254111],"category_scores_gemma":[0.0003351966,0.000059656333,0.000024749887,0.000108288004,0.00002895455,0.00020503828,0.000005041927,0.00007305842,3.009551e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030056051,0.000035921825,0.029616943,0.00020305836,0.000010156033,0.0000021649323,0.00008822829,6.869024e-7,0.9693833,0.000005078606,0.0000043387513,0.0006200959],"study_design_scores_gemma":[0.0005075728,0.000029108282,0.045199018,0.00090221036,0.00001943223,0.000039443923,0.000010585385,0.000010979227,0.95236564,0.0000060362245,0.0008416388,0.00006834408],"about_ca_topic_score_codex":0.000008705172,"about_ca_topic_score_gemma":0.000008441971,"teacher_disagreement_score":0.017017642,"about_ca_system_score_codex":0.0000600309,"about_ca_system_score_gemma":0.00002530385,"threshold_uncertainty_score":0.24327147},"labels":[],"label_agreement":null},{"id":"W2089093678","doi":"10.1002/bit.10313","title":"Enhancement of a two‐phase partitioning bioreactor system by modification of the microbial catalyst: Demonstration of concept","year":2002,"lang":"en","type":"article","venue":"Biotechnology and Bioengineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Bioreactor; Chemistry; Pseudomonas putida; Phenol; Solvent; Biodegradation; Catalysis; Xenobiotic; Chemical engineering; Yield (engineering); Microbial consortium; Chromatography; Microorganism; Organic chemistry; Bacteria; Enzyme; Materials science","score_opus":0.010364857952819634,"score_gpt":0.2028400700909597,"score_spread":0.19247521213814006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089093678","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960485,0.0001400222,0.0033124855,0.00016226374,0.00006595262,0.00013675111,0.000058238813,0.00001888232,0.00005690014],"genre_scores_gemma":[0.9995444,0.000033114815,0.00039034348,0.0000043092946,0.000004317575,0.0000017982094,0.000009078438,0.0000027362355,0.000009904335],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99947494,0.000011499458,0.00024668666,0.000112148075,0.00006942448,0.000085276304],"domain_scores_gemma":[0.9996284,0.000007976412,0.00021611134,0.00012375208,0.000008021382,0.000015690634],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000676734,0.00006701828,0.0001084435,0.000029636123,0.000029054785,0.0000022111797,0.00009520047,0.00010641124,0.00006777169],"category_scores_gemma":[0.000010101584,0.000051243554,0.000025514117,0.000177539,0.0002526738,0.000039659513,0.000039440903,0.00005022229,0.0000022962051],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000003389388,0.000051783394,0.0008632657,0.000022058788,0.000008654101,6.954921e-8,0.00008131201,0.00003739096,0.9970708,0.0002443682,0.000064577915,0.0015523493],"study_design_scores_gemma":[0.0003312371,0.000050586557,0.000434125,0.000033311026,0.000013921465,0.0000028807501,0.00004829044,0.0034312236,0.99549973,8.7364435e-7,0.000103868246,0.000049944592],"about_ca_topic_score_codex":0.000052088217,"about_ca_topic_score_gemma":0.000008096338,"teacher_disagreement_score":0.003495894,"about_ca_system_score_codex":0.00002203536,"about_ca_system_score_gemma":0.0000022410154,"threshold_uncertainty_score":0.20896515},"labels":[],"label_agreement":null},{"id":"W2089359137","doi":"10.1159/000121324","title":"Anaerobic Biodegradation of Aromatic Hydrocarbons: Pathways and Prospects","year":2008,"lang":"en","type":"review","venue":"Microbial Physiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":321,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biodegradation; Bioremediation; Anaerobic exercise; Environmental chemistry; Aromatic hydrocarbon; Microbial biodegradation; Chemistry; Biochemical engineering; Hydrocarbon; Organic chemistry; Microorganism; Biology; Bacteria; Ecology; Contamination; Engineering","score_opus":0.02216735456294895,"score_gpt":0.23472463406847896,"score_spread":0.21255727950553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089359137","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.044206314,0.9538553,0.0000030302124,0.0000140300535,0.00030240443,0.0010715628,0.000109300134,0.000054613494,0.00038345862],"genre_scores_gemma":[0.00433174,0.9948102,0.00036985805,0.000056113386,0.000056623037,0.000009754895,0.00026880685,0.00002662521,0.000070231246],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99836487,0.00015513724,0.00058933627,0.0005113549,0.00010040668,0.00027892418],"domain_scores_gemma":[0.9990573,0.00005129951,0.0005233117,0.00029271404,0.0000029299622,0.00007243366],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00007205408,0.00035757595,0.0011064389,0.00008429084,0.00008129084,0.000008432655,0.00025130223,0.00033596225,0.00017905759],"category_scores_gemma":[0.000029372244,0.00028130307,0.00019750741,0.00031238736,0.00051005435,0.000066384484,0.00020202462,0.00018692613,0.00038635184],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012878613,0.00020153123,0.000018684828,0.001701939,0.00008112,0.000006344748,0.00018934114,6.200105e-7,0.6952965,0.000018270332,0.0068225367,0.2956502],"study_design_scores_gemma":[0.0005692708,0.0002739737,0.0007301027,0.0018314276,0.00023229475,0.00016870948,0.000009155548,0.000008810292,0.0048126234,0.00030013756,0.9901055,0.00095800293],"about_ca_topic_score_codex":0.00008038205,"about_ca_topic_score_gemma":0.00003298428,"teacher_disagreement_score":0.983283,"about_ca_system_score_codex":0.00010093895,"about_ca_system_score_gemma":0.00005051483,"threshold_uncertainty_score":0.99996394},"labels":[],"label_agreement":null},{"id":"W2089991068","doi":"10.1016/j.biortech.2012.01.092","title":"Influence of rhamnolipids and Triton X-100 on adsorption of phenol by Penicillium simplicissimum","year":2012,"lang":"en","type":"article","venue":"Bioresource Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":47,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Northern British Columbia","funders":"Program for New Century Excellent Talents in University; Specialized Research Fund for the Doctoral Program of Higher Education of China; Hunan Provincial Innovation Foundation for Postgraduate; Natural Science Foundation of Hunan Province; National Natural Science Foundation of China","keywords":"Adsorption; Phenol; Chemistry; Zeta potential; Freundlich equation; Nuclear chemistry; Fourier transform infrared spectroscopy; Langmuir; Chromatography; Organic chemistry; Chemical engineering; Nanoparticle","score_opus":0.006033979553893479,"score_gpt":0.21731193422095096,"score_spread":0.21127795466705748,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089991068","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99886024,0.000112387264,0.000009922604,0.00027403183,0.000028432267,0.00016488122,0.00003483557,0.000053769756,0.00046150596],"genre_scores_gemma":[0.99960953,0.000038777514,0.000113699025,0.00014664786,0.000014394804,0.0000029338821,0.000004390398,0.000008612909,0.000061001683],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990991,0.000025081868,0.00026518048,0.000190372,0.00016473059,0.00025555366],"domain_scores_gemma":[0.9994544,0.00002929505,0.00019239205,0.0002454308,0.000010882802,0.000067625675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015251049,0.00012352174,0.00018668987,0.00010670064,0.000028162418,0.0000025785198,0.0002037596,0.00024250738,0.00019879786],"category_scores_gemma":[0.00007215352,0.00010506166,0.000026888638,0.00034806514,0.0005028495,0.00006675905,0.00014338868,0.00010837228,0.00006988037],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026727575,0.000109662185,0.14478795,0.000007870345,0.000003815717,6.5747905e-8,0.000098337914,0.000016938853,0.85090405,0.00010680739,0.0009719572,0.0029658359],"study_design_scores_gemma":[0.0004000132,0.0002640686,0.08542335,0.00001559415,0.000011201967,0.0000039708443,0.0000879478,0.000025394678,0.8932462,0.00006167531,0.0203177,0.00014293625],"about_ca_topic_score_codex":0.000074734984,"about_ca_topic_score_gemma":0.0000061646087,"teacher_disagreement_score":0.0593646,"about_ca_system_score_codex":0.000041366788,"about_ca_system_score_gemma":0.0000037338298,"threshold_uncertainty_score":0.428429},"labels":[],"label_agreement":null},{"id":"W2090221538","doi":"10.2134/jeq2000.00472425002900040001x","title":"Anaerobic Biodegradation of Trichloroethylene Sorbed by a Surrogate Soil Organic Matter","year":2000,"lang":"en","type":"article","venue":"Journal of Environmental Quality","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada; Loyola University Chicago Stritch School of Medicine","keywords":"Trichloroethylene; Biodegradation; Chemistry; Environmental chemistry; Sorption; Organic matter; Incubation; Desorption; Cometabolism; Reductive dechlorination; Anaerobic exercise; Degradation (telecommunications); Adsorption; Contamination; Bioremediation; Organic chemistry; Biochemistry; Ecology; Biology","score_opus":0.008591408422543538,"score_gpt":0.2241286982424174,"score_spread":0.21553728981987386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090221538","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988177,0.000100517085,0.000031178926,0.00036560875,0.00007897889,0.000093156144,0.000103201724,0.0000047751905,0.0004048845],"genre_scores_gemma":[0.99783254,0.00041589144,0.0003028093,0.00040636415,0.00002593815,3.558477e-7,0.00002187424,0.000011749287,0.0009824829],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99809694,0.00020220767,0.0008328561,0.00017712804,0.00049555337,0.00019528363],"domain_scores_gemma":[0.9990104,0.000052352054,0.00062261435,0.00017972487,0.0000040640634,0.00013086217],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0007174634,0.0001527662,0.00027875605,0.000033471748,0.00005203328,0.00001377533,0.0002329953,0.00008963871,0.076616034],"category_scores_gemma":[0.000019861125,0.00012600186,0.00013570176,0.00014786066,0.00020579684,0.0002949531,0.000045656932,0.00014940606,0.001127297],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001091426,0.0003528595,0.053153004,0.000005265298,0.000019093535,0.000001815696,0.00014962176,0.000020929587,0.93472815,3.7207386e-7,0.0045555835,0.006904167],"study_design_scores_gemma":[0.0013234144,0.00019470518,0.4815201,0.000011958968,0.000034166173,0.000021032392,0.00011961588,0.000012770707,0.5087577,0.000039017617,0.0077468073,0.0002187155],"about_ca_topic_score_codex":0.000084470914,"about_ca_topic_score_gemma":0.00002442955,"teacher_disagreement_score":0.42836708,"about_ca_system_score_codex":0.00022139028,"about_ca_system_score_gemma":0.000009346663,"threshold_uncertainty_score":0.9996504},"labels":[],"label_agreement":null},{"id":"W2090326153","doi":"10.5539/ijc.v5n4p43","title":"Polycyclic Aromatic Hydrocarbons Degradation Techniques: A Review","year":2013,"lang":"en","type":"review","venue":"International Journal of Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Chemistry; Degradation (telecommunications); Environmental chemistry; Polycyclic aromatic hydrocarbon; Organic chemistry","score_opus":0.02007140733529931,"score_gpt":0.29947364306189694,"score_spread":0.2794022357265976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090326153","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006999619,0.99335235,0.000027776916,0.0002926663,0.00030510983,0.00023219083,0.000009369104,0.000017492364,0.005693031],"genre_scores_gemma":[0.000036353787,0.99741805,0.00072797894,0.00029364214,0.00028174333,0.000009023325,0.00006590302,0.000020473524,0.0011468172],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978656,0.000050477836,0.0010823105,0.00017521718,0.00068983476,0.00013651891],"domain_scores_gemma":[0.9979505,0.000056922232,0.0016825221,0.00017904773,0.0000093150375,0.00012169107],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00029878487,0.0002543074,0.00068775733,0.00004937048,0.000018523097,0.00005082341,0.0009480099,0.00019171162,0.001745676],"category_scores_gemma":[0.00019676093,0.0001859574,0.00045074619,0.00015244911,0.00007004259,0.00018189066,0.00011061715,0.00036506014,0.00047161902],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000015666981,0.00006109902,0.0000067864353,0.0010162083,0.00011794382,0.000024131616,0.0000053114795,1.1755033e-8,0.0035301107,1.1553491e-7,0.030113297,0.9651234],"study_design_scores_gemma":[0.00006801427,0.000009313235,0.0000015026457,0.020035831,0.00020312061,0.00063877227,0.0000017406609,7.479243e-7,0.0020549863,0.000032889333,0.97677135,0.00018175395],"about_ca_topic_score_codex":0.0000087686985,"about_ca_topic_score_gemma":6.3864593e-7,"teacher_disagreement_score":0.9649417,"about_ca_system_score_codex":0.00043958044,"about_ca_system_score_gemma":0.00010214778,"threshold_uncertainty_score":0.99916685},"labels":[],"label_agreement":null},{"id":"W2090336649","doi":"10.1111/j.1472-765x.2006.02070.x","title":"Temperature-dependent biotransformation of 2,4'-dichlorobiphenyl by psychrotolerant Hydrogenophaga strain IA3-A: higher temperatures prevent excess accumulation of problematic meta-cleavage products","year":2007,"lang":"en","type":"article","venue":"Letters in Applied Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Biotransformation; Strain (injury); Cleavage (geology); Chemistry; Stereochemistry; Biology; Biochemistry; Enzyme; Anatomy","score_opus":0.020313381951141636,"score_gpt":0.25252867280705327,"score_spread":0.23221529085591164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090336649","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962674,0.00011684796,0.00021908786,0.0008712978,0.0002329303,0.0017577871,0.00019462388,0.00002900276,0.000311059],"genre_scores_gemma":[0.99685746,0.00001832154,0.0016302627,0.0010861044,0.000033125536,0.000029201905,0.0002888623,0.000020794147,0.000035865705],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99779356,0.00010953667,0.0010224176,0.00047957987,0.00018372935,0.0004111736],"domain_scores_gemma":[0.99912065,0.00004694403,0.00046388034,0.00030118445,0.00001531475,0.000052024523],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00087289384,0.0003035927,0.0005466334,0.00012808986,0.000047721704,0.000012913484,0.00032012482,0.00023855259,0.0005109792],"category_scores_gemma":[0.000008301649,0.0002418719,0.00009359319,0.0004377489,0.0002715994,0.00010787465,0.0000616288,0.0002425975,0.00003200714],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012095973,0.00028837545,0.00038874865,0.00016380494,0.00010659494,0.000002124634,0.00052554905,0.00028646708,0.9955486,0.000037342325,0.0023125145,0.00021888792],"study_design_scores_gemma":[0.0008709148,0.000054814434,0.0020210461,0.000023864353,0.00007818873,0.00000850489,0.000035881778,0.0000040594873,0.99588335,0.000036030287,0.00074316876,0.00024018514],"about_ca_topic_score_codex":0.00004888342,"about_ca_topic_score_gemma":0.00006788613,"teacher_disagreement_score":0.0017285851,"about_ca_system_score_codex":0.00013071932,"about_ca_system_score_gemma":0.000011834689,"threshold_uncertainty_score":0.98632497},"labels":[],"label_agreement":null},{"id":"W2090483738","doi":"10.1016/s0043-1354(01)00175-0","title":"DEGRADATION OF AROCLOR 1242 IN A SINGLE-STAGE COUPLED ANAEROBIC/AEROBIC BIOREACTOR","year":2001,"lang":"en","type":"article","venue":"Water Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Bioreactor; Anaerobic exercise; Degradation (telecommunications); Chemistry; Biodegradation; Environmental chemistry; Environmental science; Pulp and paper industry; Biology; Computer science; Organic chemistry; Engineering","score_opus":0.07649672734545465,"score_gpt":0.30970833770594725,"score_spread":0.2332116103604926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090483738","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969072,0.0000070727556,0.000019177725,0.0004387161,0.000044809833,0.00029450265,0.000006839257,0.0000149010375,0.002266804],"genre_scores_gemma":[0.9954926,0.00005230124,0.00023079738,0.00003998642,0.000016539989,0.000005730813,0.00004673155,0.000010341171,0.0041049854],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998345,0.0001370678,0.00026922574,0.0002724012,0.0005121813,0.00046408855],"domain_scores_gemma":[0.99960023,0.000020308187,0.00003569491,0.00022301267,0.00002746801,0.00009328306],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00093377556,0.0000945037,0.00012840488,0.00015822305,0.000057411296,0.000032468906,0.0002502866,0.00008217708,0.0055925925],"category_scores_gemma":[0.000041662817,0.00006621443,0.000031892676,0.0005351137,0.00021954549,0.00017079529,0.00016687559,0.00017650826,0.0011095374],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006711518,0.00017024273,0.03667978,0.000006595537,0.000002255787,0.000012501091,0.00035634186,0.000020208217,0.960897,0.0000052112887,0.00039432707,0.0013883812],"study_design_scores_gemma":[0.00063421606,0.00015906562,0.035166215,0.00001850308,0.000001585987,0.0000026652788,0.00013332714,0.00044744328,0.9313821,0.000031670133,0.031880505,0.00014265678],"about_ca_topic_score_codex":0.0018393336,"about_ca_topic_score_gemma":0.0022441796,"teacher_disagreement_score":0.03148618,"about_ca_system_score_codex":0.00022085724,"about_ca_system_score_gemma":0.000012569528,"threshold_uncertainty_score":0.99966824},"labels":[],"label_agreement":null},{"id":"W2090580703","doi":"10.1016/s0021-9673(02)01003-8","title":"Characterization and source identification of hydrocarbons in water samples using multiple analytical techniques","year":2002,"lang":"en","type":"article","venue":"Journal of Chromatography A","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":101,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Golder Associates (Canada); Environment and Climate Change Canada","funders":"","keywords":"BTEX; Chemistry; Aquifer; Gasoline; Environmental chemistry; Petroleum product; Ethylbenzene; Petroleum; Flame ionization detector; Hydrocarbon; Contamination; Gas chromatography; Groundwater; Toluene; Pollutant; Chromatography; Gas chromatography–mass spectrometry; Solid-phase microextraction; Mass spectrometry; Geology; Organic chemistry","score_opus":0.01631182601293848,"score_gpt":0.21895754990713576,"score_spread":0.20264572389419727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090580703","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99774086,0.000015155726,0.0020505136,0.00007966992,0.000021828553,0.000060186987,0.000002473554,0.0000048824995,0.000024413162],"genre_scores_gemma":[0.9992749,0.00007828813,0.0005934566,0.000027173499,0.00001404892,2.305985e-7,0.0000020588357,0.000004097947,0.0000057238058],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992339,0.000035905705,0.00041314712,0.00007452793,0.00015453453,0.00008796155],"domain_scores_gemma":[0.9996508,0.000014633247,0.00023004888,0.000056840174,0.0000073995134,0.00004027632],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023097346,0.00005827206,0.00012548821,0.00016384963,0.00002274986,0.000016685754,0.00006716006,0.000046334968,0.000108960536],"category_scores_gemma":[0.000022075366,0.000042410356,0.0000513548,0.00021211662,0.00009788476,0.00019085532,0.000021788035,0.000056830882,0.0000021923943],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005646544,0.00005220258,0.21289961,0.0000038064663,0.0000047303033,9.4882216e-7,0.00027175382,0.0000030574838,0.78448886,7.8598316e-7,0.000011497491,0.002257089],"study_design_scores_gemma":[0.0002721357,0.000047147565,0.2882805,0.000039326995,0.000019167006,0.000040096664,0.000043189444,0.009671022,0.7008317,0.000025991565,0.00064264756,0.00008706554],"about_ca_topic_score_codex":0.00002222688,"about_ca_topic_score_gemma":0.000010329458,"teacher_disagreement_score":0.08365714,"about_ca_system_score_codex":0.000019781346,"about_ca_system_score_gemma":0.0000015877307,"threshold_uncertainty_score":0.17294441},"labels":[],"label_agreement":null},{"id":"W2090628773","doi":"10.1007/s10895-005-2522-6","title":"Fluorescent Methods to Study DNA, RNA, Proteins and Cytoplasmic Membrane Polarization in the Pentachlorophenol-Mineralizing Bacterium Sphingomonas sp. UG30 During Nutrient Starvation in Water","year":2005,"lang":"en","type":"article","venue":"Journal of Fluorescence","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Environment and Climate Change Canada; University of Guelph","funders":"","keywords":"Chemistry; Pentachlorophenol; Cytoplasm; Bacteria; Acridine orange; RNA; DNA; DAPI; Cell membrane; Biochemistry; Cell; Sphingomonas; Membrane; Microbiology; Biology; Gene; Environmental chemistry","score_opus":0.011495294259071578,"score_gpt":0.25872125125175566,"score_spread":0.24722595699268407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090628773","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971632,0.000018698987,0.00023197354,0.0017384052,0.00011821983,0.0007076369,0.0000014513931,0.0000053973163,0.00001506069],"genre_scores_gemma":[0.98736095,0.000033958,0.012248304,0.0002386475,0.00008017945,0.0000054184948,0.0000021142052,0.000010378079,0.000020032068],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99798864,0.00032805317,0.00067333324,0.00023910118,0.00047191238,0.00029897288],"domain_scores_gemma":[0.9994873,0.000030933577,0.00020256214,0.00015841276,0.000026661366,0.000094161274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016436945,0.00016639686,0.00021439133,0.00017069465,0.000097404445,0.00009339074,0.00031020853,0.00004545573,0.00017022397],"category_scores_gemma":[0.000089363886,0.000105163446,0.000036462578,0.0003626728,0.000042237592,0.0005227941,0.0001360299,0.00027338698,0.000023091668],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014544283,0.0003409597,0.10923212,0.000009163983,0.000004239584,0.000022755929,0.007328668,0.0002216229,0.87983274,0.0000024655194,0.0000115903,0.0028482508],"study_design_scores_gemma":[0.00078899483,0.0001195459,0.46053457,0.000039554423,0.0000071081763,0.000024194778,0.00050732575,0.00024092771,0.5374775,0.0000067218066,0.00014829826,0.00010524256],"about_ca_topic_score_codex":0.00018495435,"about_ca_topic_score_gemma":0.00041851474,"teacher_disagreement_score":0.35130247,"about_ca_system_score_codex":0.00030865482,"about_ca_system_score_gemma":0.000012779378,"threshold_uncertainty_score":0.4288441},"labels":[],"label_agreement":null},{"id":"W2090892571","doi":"10.1111/j.1365-2672.2006.02926.x","title":"Acidophilic microbial communities associated with a natural, biodegraded hydrocarbon seepage","year":2006,"lang":"en","type":"article","venue":"Journal of Applied Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Temperature gradient gel electrophoresis; Microbial population biology; Biodegradation; Petroleum; Bioremediation; Alphaproteobacteria; Archaea; Environmental chemistry; Bacteria; Biology; Gammaproteobacteria; Metagenomics; Microbial ecology; Dominance (genetics); Microorganism; Ecology; Chemistry; 16S ribosomal RNA; Biochemistry; Gene","score_opus":0.004937350468077911,"score_gpt":0.17110368585919256,"score_spread":0.16616633539111464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090892571","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964231,0.000064292246,0.000013893347,0.0002432857,0.00021804497,0.00015394275,0.00005124406,0.000025067671,0.0028071245],"genre_scores_gemma":[0.998418,0.000021485517,0.0005539491,0.0006295339,0.000087587585,0.0000010027409,0.00010589942,0.000017383214,0.00016518249],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99878395,0.00008406726,0.00051828614,0.00015277078,0.00010643453,0.000354521],"domain_scores_gemma":[0.9990493,0.00007445745,0.00062598137,0.00015959903,0.000031855234,0.000058808124],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032035614,0.0002276884,0.0003784209,0.000100461635,0.000121639234,0.0000309353,0.00038721386,0.00018692469,0.00047340489],"category_scores_gemma":[0.0000085217935,0.00016159455,0.000099318626,0.00027131417,0.00045787948,0.00008391019,0.00010203993,0.00041890613,0.00010334655],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020193135,0.00015433785,0.0020731408,0.0000025037814,0.000044937773,0.000013516597,0.0001694915,0.00006587072,0.9877606,0.000021852264,0.009351931,0.00013988321],"study_design_scores_gemma":[0.0069512306,0.0008370666,0.028670115,0.00009455221,0.00019158471,0.00083026645,0.000641917,0.000047204758,0.90552026,0.00043203824,0.05470839,0.0010753504],"about_ca_topic_score_codex":0.000084792395,"about_ca_topic_score_gemma":0.0010494657,"teacher_disagreement_score":0.08224032,"about_ca_system_score_codex":0.00021394073,"about_ca_system_score_gemma":0.000032160493,"threshold_uncertainty_score":0.65896344},"labels":[],"label_agreement":null},{"id":"W2091246672","doi":"10.1080/09593330.2013.781231","title":"Decontamination of metals and polycyclic aromatic hydrocarbons from slag-polluted soil","year":2013,"lang":"en","type":"article","venue":"Environmental Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Human decontamination; Environmental chemistry; Contamination; Slag (welding); Soil contamination; Chemistry; Smelting; Extraction (chemistry); Environmental science; Waste management; Soil water; Metallurgy; Materials science; Organic chemistry","score_opus":0.0032286735231004176,"score_gpt":0.17018030782662735,"score_spread":0.16695163430352694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091246672","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978586,0.00011281773,0.000058043366,0.0006453553,0.000049294,0.0002463328,0.000016783344,0.00005348624,0.00095932896],"genre_scores_gemma":[0.9984387,0.00007828881,0.0010146955,0.00014532648,0.0000066888974,0.0000142062645,0.000025115996,0.000011307067,0.00026562656],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99908656,0.000029117109,0.00026976183,0.00027635705,0.00014582028,0.00019236238],"domain_scores_gemma":[0.9995386,0.000028393202,0.00014753909,0.00022453832,1.637627e-7,0.000060735907],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000056526394,0.00014058911,0.00018599052,0.000081773826,0.000049121307,0.00000884553,0.00017302844,0.00017618267,0.0021641867],"category_scores_gemma":[0.000018268513,0.00012840236,0.000032684507,0.0001388631,0.00049171253,0.00015095054,0.00018413893,0.00009235322,0.0010049406],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000020411424,0.00006701926,0.05646657,6.078372e-7,0.00001493745,8.5997385e-7,0.00007262649,4.301019e-7,0.9286356,0.0000051960888,0.00019988237,0.014534253],"study_design_scores_gemma":[0.00050543516,0.000087367924,0.40548941,0.00000656196,0.000025859787,0.000008006218,0.0002801801,0.00042861575,0.58881617,0.0035018236,0.0006570284,0.00019352537],"about_ca_topic_score_codex":0.0003114672,"about_ca_topic_score_gemma":0.000091226924,"teacher_disagreement_score":0.34902284,"about_ca_system_score_codex":0.00007918868,"about_ca_system_score_gemma":0.0000019756565,"threshold_uncertainty_score":0.9997729},"labels":[],"label_agreement":null},{"id":"W2091524252","doi":"10.1007/s00253-002-1011-y","title":"Use of a two-phase partitioning bioreactor for degrading polycyclic aromatic hydrocarbons by a Sphingomonas sp.","year":2002,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":95,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada; Directorate for Biological Sciences","keywords":"Phenanthrene; Chemistry; Biodegradation; Acenaphthene; Sphingomonas; Chromatography; Naphthalene; Solvent; Bioreactor; Dodecane; Anthracene; Aqueous two-phase system; Partition coefficient; Extraction (chemistry); Polycyclic aromatic hydrocarbon; Environmental chemistry; Aqueous solution; Organic chemistry; Biochemistry","score_opus":0.0199248982384691,"score_gpt":0.22618945067793914,"score_spread":0.20626455243947003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091524252","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99749255,0.00012381481,0.0006273044,0.0010175686,0.000058633243,0.0003883033,0.000090679074,0.000085098814,0.00011602421],"genre_scores_gemma":[0.9961223,0.000116854055,0.0031468163,0.00042296824,0.000010737436,0.00002028291,0.0000841178,0.000012405487,0.00006353896],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99889606,0.000020785728,0.00031562193,0.0003863556,0.000029306759,0.00035187398],"domain_scores_gemma":[0.9994614,0.00010193002,0.00018954693,0.00018932193,0.000001070744,0.00005669419],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010396883,0.00018325368,0.00027084356,0.00008250063,0.00012468096,0.000012266017,0.00015182486,0.00039295963,0.000118757314],"category_scores_gemma":[0.000037627833,0.00015947188,0.000049568935,0.00020832734,0.0007192544,0.00005616728,0.000093938834,0.00014736755,0.00006433477],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028705603,0.00014946108,0.0011345333,0.000004021162,0.000023498967,8.0912224e-7,0.000068060726,1.7561726e-7,0.98895425,0.0002568708,0.0026808206,0.0066987765],"study_design_scores_gemma":[0.001370047,0.00018553044,0.00008787018,0.0000090728445,0.000035151683,0.000045151206,0.000038424263,0.0002293091,0.9755079,0.00041705827,0.021849602,0.00022484898],"about_ca_topic_score_codex":0.000048546022,"about_ca_topic_score_gemma":0.0000533945,"teacher_disagreement_score":0.019168781,"about_ca_system_score_codex":0.000034124183,"about_ca_system_score_gemma":0.000002980442,"threshold_uncertainty_score":0.6503075},"labels":[],"label_agreement":null},{"id":"W2091581640","doi":"10.1139/w09-002","title":"<i>Pseudomonas fluorescens ompW</i>: plasmid localization and requirement for naphthalene uptake","year":2009,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Suppression subtractive hybridization; Pseudomonas fluorescens; Biology; Efflux; cDNA library; Gene; Porin; Plasmid; Complementary DNA; Pseudomonas; Mutant; Catabolism; Biochemistry; Microbiology; Escherichia coli; Molecular biology; Bacteria; Genetics; Bacterial outer membrane; Metabolism","score_opus":0.01199116417585528,"score_gpt":0.21230274037165048,"score_spread":0.2003115761957952,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091581640","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99387527,0.00045941514,0.0009910642,0.003140759,0.00057427946,0.0002705113,0.00013475049,0.0000060155276,0.00054792385],"genre_scores_gemma":[0.99582255,0.00007009426,0.0014697851,0.0024089257,0.00007364402,3.615229e-7,0.000024783012,0.000006137737,0.00012373811],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99918425,0.00003338057,0.00032418422,0.00014282881,0.000036230507,0.00027910364],"domain_scores_gemma":[0.9993961,0.00001775627,0.00017505164,0.000073466064,0.000035748613,0.00030189176],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002643067,0.00010501329,0.00016016947,0.00007683615,0.000110349814,0.000019700574,0.00014274812,0.000107220534,0.0005675609],"category_scores_gemma":[0.000051171064,0.00008996805,0.000050724208,0.00008609266,0.00015764189,0.00007765739,0.000009254011,0.000075536984,0.000029025761],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031758897,0.000015467516,0.0059420266,0.0000033506767,0.000009883157,0.000017478364,0.00016827798,0.000057417623,0.93840915,0.00005325416,0.04895338,0.0063385386],"study_design_scores_gemma":[0.0018736408,0.0009938473,0.017513141,0.000054017975,0.000040959298,0.0009532557,0.00008411448,0.00008098553,0.14154907,0.0004011246,0.83610505,0.00035082106],"about_ca_topic_score_codex":0.00017285773,"about_ca_topic_score_gemma":0.0055904323,"teacher_disagreement_score":0.7968601,"about_ca_system_score_codex":0.00014816542,"about_ca_system_score_gemma":0.00010933214,"threshold_uncertainty_score":0.6214394},"labels":[],"label_agreement":null},{"id":"W2091615726","doi":"10.1007/s00128-003-0246-3","title":"Effects of Soil Moisture and Aeration on the Biodegradation of Pentachlorophenol Contaminated Soil","year":2004,"lang":"en","type":"article","venue":"Bulletin of Environmental Contamination and Toxicology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nova Scotia Department of Agriculture","funders":"","keywords":"Pentachlorophenol; Biodegradation; Aeration; Environmental science; Soil contamination; Contamination; Ecotoxicology; Environmental chemistry; Soil Pollutants; Moisture; Environmental engineering; Soil water; Waste management; Soil science; Ecology; Chemistry; Biology; Engineering","score_opus":0.003771236085550135,"score_gpt":0.1738883769926336,"score_spread":0.17011714090708346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091615726","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975035,0.00006559871,0.00005344961,0.0013325376,0.00004967739,0.00038341654,0.00002241404,0.0000049715727,0.0005844299],"genre_scores_gemma":[0.99916136,0.00018946825,0.00006922319,0.00039315244,0.000006288707,0.0000072249118,0.000020612968,0.0000060617317,0.00014662297],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99917,0.00009779693,0.00027557477,0.00018618419,0.00017315292,0.00009729874],"domain_scores_gemma":[0.9994587,0.00014632037,0.00026585904,0.00008833544,0.000005035975,0.000035751385],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018078368,0.00011610747,0.00017308131,0.00003556821,0.00006205409,0.000004742369,0.00007268633,0.00010480673,0.0007757582],"category_scores_gemma":[0.000051342267,0.000088508365,0.00002919264,0.00004227061,0.00047559149,0.000029109902,0.000066284956,0.000071480776,0.000020451262],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000090618545,0.00035809338,0.008907313,0.000032692777,0.000015794552,0.0000012373545,0.00044601603,0.000033266595,0.9842914,0.00084836234,0.00015864408,0.004816563],"study_design_scores_gemma":[0.0011570129,0.00050041784,0.43738294,0.000015721616,0.00002080884,0.0000023855932,0.00021558945,0.00001941591,0.5600128,0.000055781158,0.0005469706,0.00007012205],"about_ca_topic_score_codex":0.00016964691,"about_ca_topic_score_gemma":0.00014641881,"teacher_disagreement_score":0.42847562,"about_ca_system_score_codex":0.00006651514,"about_ca_system_score_gemma":0.0000046557448,"threshold_uncertainty_score":0.8494008},"labels":[],"label_agreement":null},{"id":"W2091968516","doi":"10.1139/w03-009","title":"Degradation of phenanthrene and naphthalene by a<i>Burkholderia</i>species strain","year":2003,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Korea Science and Engineering Foundation; Yonsei University; East Tennessee State University","keywords":"Phenanthrene; Naphthalene; Metabolite; Chemistry; Chromatography; Bacteria; Strain (injury); Microbial biodegradation; High-performance liquid chromatography; Degradation (telecommunications); Burkholderia; Substrate (aquarium); Organic chemistry; Biochemistry; Microorganism; Biology","score_opus":0.010031815060366232,"score_gpt":0.18519063735411392,"score_spread":0.17515882229374768,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091968516","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99778026,0.00050440436,0.000047313715,0.00024550912,0.00020408159,0.00004772592,0.00030946318,0.0000011068813,0.0008601235],"genre_scores_gemma":[0.9989685,0.000108476626,0.0003927529,0.00017813672,0.000010823792,8.9326896e-8,0.000021095773,0.0000045683987,0.00031555066],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999335,0.000077797915,0.00027654125,0.00009542582,0.00003172608,0.00018354431],"domain_scores_gemma":[0.9994954,0.000018501036,0.00020769562,0.00006211265,0.000021309872,0.00019499389],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00025671316,0.00008111589,0.0001563464,0.0000571505,0.00004794993,0.000008986997,0.00010649311,0.000082260056,0.0024501635],"category_scores_gemma":[0.00006278332,0.00006671933,0.000033365228,0.00009232284,0.00033663886,0.000066186934,0.0000072178755,0.00007598031,0.000010994867],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000395512,0.000008456456,0.013483067,0.0000021431556,0.0000086427735,0.0000041983667,0.00014401574,0.0000021888857,0.97716033,0.000036699832,0.008580548,0.00056573225],"study_design_scores_gemma":[0.00066770724,0.0001939311,0.0070175854,0.000018854636,0.00001943931,0.0003743181,0.00043636814,5.136413e-7,0.87837344,0.000065198816,0.11267313,0.00015950744],"about_ca_topic_score_codex":0.0006304748,"about_ca_topic_score_gemma":0.007217518,"teacher_disagreement_score":0.10409259,"about_ca_system_score_codex":0.00006796901,"about_ca_system_score_gemma":0.00010334379,"threshold_uncertainty_score":0.9984617},"labels":[],"label_agreement":null},{"id":"W2092248722","doi":"10.1007/s002030000216","title":"Salt-tolerant phenol-degrading microorganisms isolated from Amazonian soil samples","year":2000,"lang":"en","type":"article","venue":"Archives of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":95,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Alcaligenes faecalis; Candida tropicalis; Microorganism; Phenol; Microbiology; Microbial population biology; Biology; Chemistry; Food science; Bioremediation; Bacteria; Microbial biodegradation; Environmental chemistry; Candida albicans; Organic chemistry","score_opus":0.006979373915914714,"score_gpt":0.18750433018973692,"score_spread":0.1805249562738222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092248722","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959081,0.00009898447,0.00014483008,0.00030762286,0.00011186709,0.0001451796,0.00039184655,0.000049124003,0.0028424836],"genre_scores_gemma":[0.9942431,0.00017661757,0.004133469,0.00054553343,0.00003856437,0.0000011986873,0.00024642827,0.000018557956,0.0005965612],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99864125,0.00012534,0.00038142124,0.00042338678,0.000046738063,0.00038185163],"domain_scores_gemma":[0.9993794,0.00013263259,0.00012627113,0.00026589437,0.00000362249,0.00009220502],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00006810921,0.00020416727,0.00029116205,0.000043805812,0.00008846752,0.000012325915,0.00041015702,0.0001121509,0.016884385],"category_scores_gemma":[0.000012441326,0.0001757523,0.00010023339,0.00012260303,0.0005359204,0.000054264274,0.000119524564,0.00014179434,0.0013781993],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000097480115,0.00007662555,0.015936794,0.0000029230157,0.000028083015,0.000002918992,0.0010675414,0.000032960186,0.96013045,0.0000060473712,0.00079887226,0.021819277],"study_design_scores_gemma":[0.0007679,0.00014389493,0.05239908,0.000028944169,0.000022695847,0.00002541577,0.00006686894,0.00014913523,0.9168872,0.00044311045,0.028724935,0.00034076665],"about_ca_topic_score_codex":0.001157084,"about_ca_topic_score_gemma":0.0006659576,"teacher_disagreement_score":0.043243226,"about_ca_system_score_codex":0.00002528525,"about_ca_system_score_gemma":0.000015336773,"threshold_uncertainty_score":0.99939936},"labels":[],"label_agreement":null},{"id":"W2092293866","doi":"10.1021/es100080c","title":"Assessing Microbial Uptake of Petroleum Hydrocarbons in Groundwater Systems Using Natural Abundance Radiocarbon","year":2010,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Golder Associates (Canada)","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Environmental chemistry; Radiocarbon dating; Biodegradation; Microbial population biology; Carbon fibers; Petroleum; Total organic carbon; Chemistry; Dissolved organic carbon; Environmental science; Groundwater; Organic matter; Biology; Geology; Bacteria; Organic chemistry","score_opus":0.00660022735242375,"score_gpt":0.22230394832183417,"score_spread":0.21570372096941043,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092293866","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99798614,0.000059552607,0.00004996263,0.000110796165,0.0008994011,0.00022323475,0.000004290186,0.000047743484,0.00061886065],"genre_scores_gemma":[0.9980472,0.000010233556,0.0017854145,0.000040296196,0.00002840157,0.0000038839435,0.0000033695387,0.000014371044,0.0000668582],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99780023,0.000027524107,0.0004624353,0.0006270631,0.00045739007,0.00062538474],"domain_scores_gemma":[0.99926746,0.00001262537,0.0002245931,0.0004010929,0.0000016294755,0.0000925714],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00053695607,0.00021839967,0.00025565174,0.00037558764,0.000195617,0.00007452938,0.00077916874,0.00021254494,0.00020478088],"category_scores_gemma":[0.000033065382,0.00019834896,0.000049036542,0.0009828579,0.0033005024,0.0006825563,0.0004234416,0.0004925743,0.000080670994],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005021112,0.00010225471,0.10535027,0.0000016639605,0.0000017004764,0.0000069168577,0.00007297373,0.00012870699,0.8930833,0.000030627565,0.0000048981005,0.0012117213],"study_design_scores_gemma":[0.0007945528,0.000104463994,0.25193274,0.000034717217,0.000013913341,0.00020959399,0.00072445435,0.013627456,0.7296743,0.00010307109,0.0022330736,0.00054767926],"about_ca_topic_score_codex":0.00030159217,"about_ca_topic_score_gemma":0.00019223834,"teacher_disagreement_score":0.16340896,"about_ca_system_score_codex":0.00053590804,"about_ca_system_score_gemma":0.00003581617,"threshold_uncertainty_score":0.99941194},"labels":[],"label_agreement":null},{"id":"W2092369508","doi":"10.1021/es302202c","title":"Microbial Communities Involved in Methane Production from Hydrocarbons in Oil Sands Tailings","year":2012,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":126,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Tailings; Oil sands; BTEX; Environmental chemistry; Naphtha; Ethylbenzene; Enrichment culture; Bioremediation; Biodegradation; Petroleum; Methanogen; Hydrocarbon; Methane; Chemistry; Toluene; Environmental science; Biology; Bacteria; Ecology; Contamination; Organic chemistry","score_opus":0.009483558463738115,"score_gpt":0.2081628877277986,"score_spread":0.19867932926406048,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092369508","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99775153,0.00010990025,0.0000034976078,0.00087307155,0.00030196828,0.00013001084,0.000008391523,0.000056686116,0.00076494785],"genre_scores_gemma":[0.99878234,0.00016970065,0.0006620681,0.0001811539,0.00003053745,0.000014352868,0.000020519945,0.000010245738,0.00012911312],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982663,0.000062206556,0.00031227668,0.0003787054,0.00031094544,0.00066957885],"domain_scores_gemma":[0.9994089,0.000019909041,0.000102456965,0.0003667814,7.159479e-7,0.000101212085],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072241056,0.00018397083,0.0001888239,0.00040454557,0.00013349624,0.000016503687,0.0006156648,0.00018519914,0.0008501157],"category_scores_gemma":[0.000048116755,0.00017867654,0.000027628259,0.0013095661,0.0024406172,0.0005994425,0.0005635153,0.00035560044,0.000461816],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000072957178,0.00014758567,0.4032219,4.015045e-7,7.449245e-7,9.656657e-7,0.00078329013,0.000011108873,0.59271926,0.000004077638,0.000021019758,0.0030823306],"study_design_scores_gemma":[0.0005059815,0.000045833873,0.24362887,0.000018096633,0.0000048506054,0.000008134562,0.0033203312,0.000101051926,0.74875927,0.00022677949,0.0030659852,0.00031479026],"about_ca_topic_score_codex":0.0018094685,"about_ca_topic_score_gemma":0.003483599,"teacher_disagreement_score":0.15959305,"about_ca_system_score_codex":0.00086555927,"about_ca_system_score_gemma":0.000015927892,"threshold_uncertainty_score":0.93081707},"labels":[],"label_agreement":null},{"id":"W2092370090","doi":"10.1002/jctb.2074","title":"Biodegradation of diesel oil in a baffled roller bioreactor","year":2008,"lang":"en","type":"article","venue":"Journal of Chemical Technology & Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biodegradation; Bioreactor; Diesel fuel; Bioremediation; Pulp and paper industry; Pollutant; Waste management; Chemistry; Contamination; Organic chemistry; Ecology; Biology","score_opus":0.008943494634396594,"score_gpt":0.20735293540107833,"score_spread":0.19840944076668174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092370090","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99212915,0.00016175529,0.00003748587,0.007216446,0.00009930568,0.000052733954,0.0000055828855,0.00005467353,0.00024289456],"genre_scores_gemma":[0.9956001,0.00064675417,0.003610372,0.00007479715,0.000014789404,0.000001465022,0.0000021884182,0.00000967596,0.000039840175],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984527,0.000023407147,0.0007874947,0.00021973648,0.00023119796,0.00028546606],"domain_scores_gemma":[0.9990116,0.00003743596,0.00059210445,0.00025819405,0.00004755242,0.000053144387],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022086782,0.00016251735,0.0004651622,0.0005537502,0.000023979912,0.0000022243635,0.000571915,0.0009771463,0.0003199479],"category_scores_gemma":[0.00043099048,0.00013013711,0.000095418494,0.0013736037,0.0012252725,0.00010679554,0.00021112963,0.0006122686,0.00005608723],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000070570415,0.00021072832,0.026441187,0.0000043774094,0.000015215645,0.00003597003,0.000035289886,0.0000010005172,0.95483017,0.00006713813,0.00068998017,0.017598398],"study_design_scores_gemma":[0.0009827635,0.00015790865,0.0041293176,0.000023732131,0.000009826595,0.00031407634,0.00003750896,0.000027499726,0.9894839,0.0003480345,0.004358286,0.0001271637],"about_ca_topic_score_codex":0.000027487864,"about_ca_topic_score_gemma":0.00001610416,"teacher_disagreement_score":0.03465374,"about_ca_system_score_codex":0.00017714182,"about_ca_system_score_gemma":0.000039099,"threshold_uncertainty_score":0.75366473},"labels":[],"label_agreement":null},{"id":"W2092506983","doi":"10.1021/es101330r","title":"Insights into Enzyme Kinetics of Chloroethane Biodegradation Using Compound Specific Stable Isotopes","year":2010,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Biodegradation; Chemistry; Fractionation; Kinetic isotope effect; Environmental chemistry; Isotope fractionation; Isotopes of carbon; Kinetics; Isotope analysis; Dehalococcoides; Enzyme kinetics; Isotope; Reductive dechlorination; Organic chemistry; Enzyme; Total organic carbon; Active site","score_opus":0.009647302788662276,"score_gpt":0.21420915150446176,"score_spread":0.2045618487157995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092506983","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978671,0.0000547196,0.00041879076,0.00019057034,0.00031066,0.00023034844,0.000008716608,0.00004750441,0.0008716083],"genre_scores_gemma":[0.9915881,0.00006228161,0.008172632,0.00005623568,0.000020506439,0.0000023366892,0.000009158342,0.000009753883,0.00007899978],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983498,0.00001548947,0.00031608445,0.00049161847,0.00047786877,0.00034914166],"domain_scores_gemma":[0.9992581,0.000013386639,0.00019449845,0.00042113583,0.000005309066,0.000107569205],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017357763,0.00017123787,0.00017180997,0.0002641783,0.00020555602,0.000027027905,0.0006861751,0.00017238795,0.0023091868],"category_scores_gemma":[0.000024564908,0.00015260272,0.000032490203,0.0010524879,0.004185689,0.00036553518,0.0005000195,0.0002305791,0.00031453383],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005653102,0.00014832467,0.01342361,0.0000013585526,0.000001497524,0.0000020539453,0.0001234386,0.00004555469,0.98260087,0.0001740823,0.000044967976,0.003428576],"study_design_scores_gemma":[0.00020065167,0.00009068705,0.013359079,0.0000035552182,0.000004289752,0.000012958079,0.00017092457,0.00039350422,0.9658785,0.00047139256,0.019236296,0.00017819065],"about_ca_topic_score_codex":0.00010297957,"about_ca_topic_score_gemma":0.00012846492,"teacher_disagreement_score":0.019191328,"about_ca_system_score_codex":0.00027186432,"about_ca_system_score_gemma":0.000013117187,"threshold_uncertainty_score":0.99860287},"labels":[],"label_agreement":null},{"id":"W2092550235","doi":"10.1002/cjce.20253","title":"Degradation of polycyclic aromatic hydrocarbons: Model simulation for bioavailability and biodegradation","year":2010,"lang":"en","type":"article","venue":"The Canadian Journal of Chemical Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Naphthalene; Anthracene; Pyrene; Bioavailability; Degradation (telecommunications); Chemistry; Sorption; Dispersion (optics); Retardation factor; Biodegradation; Residual; Toluene; Matrix (chemical analysis); Environmental chemistry; Chromatography; Organic chemistry; Adsorption; Mathematics; Algorithm; Physics","score_opus":0.010251521096495273,"score_gpt":0.20014154558613986,"score_spread":0.1898900244896446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092550235","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99729425,0.000012795756,0.002246293,0.0002684693,0.00006302039,0.00009072238,0.000004302478,0.0000026678003,0.000017471117],"genre_scores_gemma":[0.9968771,5.9924395e-7,0.0030647446,0.00002383509,0.000019840585,5.814897e-7,0.0000028243755,0.0000043896584,0.000006135653],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9995551,0.00000461014,0.00021433094,0.000052175783,0.00008273573,0.000091023205],"domain_scores_gemma":[0.99962586,0.000072032875,0.000109490604,0.000067517765,0.0000044241233,0.00012069663],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002541155,0.000053579523,0.00007680571,0.000034734036,0.000027715128,0.000013354042,0.00008945224,0.00005104367,0.000013141633],"category_scores_gemma":[0.00030629517,0.000039559673,0.000030946892,0.000076829754,0.000074353884,0.000090257214,0.0000055608903,0.0000967635,8.730446e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006264227,0.000003515181,0.0010722631,0.0000039342312,0.0000037211164,6.773844e-8,0.00006932315,0.0065432796,0.9910247,0.000013867179,0.000022415856,0.0012367005],"study_design_scores_gemma":[0.00027272123,0.00001405447,0.0014885329,0.000010313429,0.000016874625,0.0000056563977,0.0000035968865,0.7031634,0.29448622,0.00037833236,0.0000936253,0.000066681045],"about_ca_topic_score_codex":0.00028003933,"about_ca_topic_score_gemma":0.0005345722,"teacher_disagreement_score":0.6966201,"about_ca_system_score_codex":0.000052619696,"about_ca_system_score_gemma":0.00003960663,"threshold_uncertainty_score":0.16131966},"labels":[],"label_agreement":null},{"id":"W2092906064","doi":"10.1016/j.plantsci.2008.09.014","title":"Phytoremediation and rhizoremediation of organic soil contaminants: Potential and challenges","year":2008,"lang":"en","type":"article","venue":"Plant Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":944,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada; U.S. Environmental Protection Agency","keywords":"Phytoremediation; Environmental remediation; Rhizosphere; Biology; Greenhouse; Contamination; Environmental science; Biochemical engineering; Agronomy; Engineering; Ecology","score_opus":0.014897964293809882,"score_gpt":0.18311759099486105,"score_spread":0.16821962670105117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092906064","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989494,0.00019118981,0.00003356253,0.00023843904,0.00014986897,0.0000930468,0.000018550476,0.000013543251,0.00031241978],"genre_scores_gemma":[0.9947588,0.004956295,0.00017883533,0.000047759007,0.000025015006,8.1370547e-7,0.000005426813,0.0000028177744,0.000024241472],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990508,0.000017282799,0.00015189894,0.00025265547,0.0003614974,0.00016587462],"domain_scores_gemma":[0.9996708,0.000025005262,0.000108442524,0.00008513963,0.000016767817,0.00009384369],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003333103,0.000076230084,0.00009625871,0.000050880157,0.00015343935,0.000010266176,0.0001129362,0.000037556078,0.000115806],"category_scores_gemma":[0.000100594494,0.000063229665,0.000008544127,0.00018950539,0.00072930165,0.0003088172,0.000095906806,0.000039681272,0.000035892663],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011505201,0.000026426293,0.06536566,0.0000101477435,0.0000012802744,0.0000039653632,0.00088935957,0.000002891515,0.930661,0.000024101533,0.00010264728,0.002900975],"study_design_scores_gemma":[0.00031416627,0.000066327135,0.87253916,0.000008687833,0.000005163536,0.00007454065,0.000112625436,0.0009614538,0.12539268,0.000033433225,0.00037617932,0.000115602044],"about_ca_topic_score_codex":0.000033892982,"about_ca_topic_score_gemma":0.000119832075,"teacher_disagreement_score":0.8071735,"about_ca_system_score_codex":0.00003110875,"about_ca_system_score_gemma":0.000025593929,"threshold_uncertainty_score":0.26871425},"labels":[],"label_agreement":null},{"id":"W2092914214","doi":"10.1080/15320383.2012.649375","title":"Influence of Short-Chain Aliphatic Acids on the Phenanthrene Desorption and Mobilization from Contaminated Soil","year":2012,"lang":"en","type":"article","venue":"Soil and Sediment Contamination An International Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina","funders":"","keywords":"Phenanthrene; Chemistry; Desorption; Oxalic acid; Citric acid; Organic acid; Tartaric acid; Malic acid; Acetic acid; Inorganic chemistry; Environmental chemistry; Organic chemistry; Adsorption","score_opus":0.012272314685183723,"score_gpt":0.23941741963699245,"score_spread":0.22714510495180873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092914214","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99772847,0.00004813892,0.00033158998,0.0013030631,0.0002831844,0.00013968452,0.000017290766,0.0000085713455,0.00013999201],"genre_scores_gemma":[0.99864644,0.00032576546,0.000028732848,0.00078182627,0.000113057475,0.000005035253,0.000034813595,0.000005859959,0.00005845703],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987794,0.00016258858,0.0003023133,0.00013597489,0.00048354693,0.00013615035],"domain_scores_gemma":[0.9994102,0.000120941644,0.00019677923,0.00009044956,0.00008382634,0.00009777545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007185656,0.000114920105,0.000092245355,0.000040876617,0.00017359565,0.000081935184,0.0001824315,0.000054685206,0.00037851304],"category_scores_gemma":[0.000094090756,0.000069859845,0.000026562298,0.0000746768,0.00017337735,0.00055753946,0.000061885235,0.00012026487,0.000014106327],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019462945,0.0004499759,0.58923185,0.000004877853,0.00012380326,0.000002942201,0.0062023075,0.0023756793,0.3452178,0.002392493,0.00030509924,0.053498544],"study_design_scores_gemma":[0.0006800017,0.00013653414,0.94586307,0.000043108113,0.000029648425,0.000021350797,0.0007780146,0.007260301,0.04418417,0.00027644564,0.00059308775,0.00013428743],"about_ca_topic_score_codex":0.00012624415,"about_ca_topic_score_gemma":0.00015707403,"teacher_disagreement_score":0.35663122,"about_ca_system_score_codex":0.00010480438,"about_ca_system_score_gemma":0.000010978121,"threshold_uncertainty_score":0.41444525},"labels":[],"label_agreement":null},{"id":"W2093008828","doi":"10.1139/w03-049","title":"High TNT-transforming activity by a mixed culture acclimated and maintained on crude-oil-containing media","year":2003,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Bioremediation; Trinitrotoluene; Subculture (biology); Carbon source; Food science; Transformation (genetics); Chemistry; Petroleum; Nitrogen; Energy source; Biodegradation; Carbon fibers; Chemically defined medium; Environmental chemistry; Pulp and paper industry; Botany; Contamination; Biology; Biochemistry; Organic chemistry; Materials science; Ecology; In vitro","score_opus":0.007045757031524406,"score_gpt":0.1906036585908476,"score_spread":0.1835579015593232,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093008828","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99795043,0.000114351125,0.000023540353,0.0006192061,0.00042516697,0.000057921898,0.0001408675,0.0000054615734,0.0006630276],"genre_scores_gemma":[0.9985926,0.00008096703,0.0003234655,0.00082996266,0.000027569306,4.6042496e-7,0.000020515512,0.000010751154,0.00011370983],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99890924,0.00015635719,0.00027228275,0.00019025944,0.0000516972,0.00042018274],"domain_scores_gemma":[0.9991942,0.000056994453,0.00019056049,0.00008477621,0.000023633283,0.0004498252],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00039528214,0.0001697155,0.0002574689,0.00008561316,0.00015133998,0.000029862696,0.00016464708,0.00020203888,0.0013996008],"category_scores_gemma":[0.00016158637,0.00013607767,0.00005596306,0.00013504279,0.0002214431,0.000112919275,0.000010392734,0.00028890852,0.000051806197],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050122824,0.000014401257,0.00687727,0.0000030106705,0.000019401503,0.000044935125,0.0005221243,0.0000040643026,0.9823175,0.000059681788,0.007510688,0.0025767891],"study_design_scores_gemma":[0.0030979242,0.0006770343,0.012373972,0.000084959705,0.00005698499,0.0011267088,0.00085274014,0.0000027999797,0.75100327,0.00013373191,0.22995818,0.0006317102],"about_ca_topic_score_codex":0.0013894007,"about_ca_topic_score_gemma":0.028110985,"teacher_disagreement_score":0.23131426,"about_ca_system_score_codex":0.00029153127,"about_ca_system_score_gemma":0.00013479647,"threshold_uncertainty_score":0.99951327},"labels":[],"label_agreement":null},{"id":"W2093703994","doi":"10.1021/es049965z","title":"Comparative Evaluation of Chloroethene Dechlorination to Ethene by <i>Dehalococcoides</i>-like Microorganisms","year":2004,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Dehalococcoides; Chemistry; Microorganism; Reductive dechlorination; Dilution; Strain (injury); Enrichment culture; Electron acceptor; Vinyl chloride; Food science; Halogenation; Microbiology; Biodegradation; Environmental chemistry; Bacteria; Biology; Biochemistry; Organic chemistry","score_opus":0.012778864841151849,"score_gpt":0.2560931907274173,"score_spread":0.24331432588626548,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093703994","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99621564,0.000044808094,0.00060582894,0.0011105883,0.00015279006,0.00064162543,0.000035371027,0.000058839996,0.0011344914],"genre_scores_gemma":[0.99725276,0.000017771854,0.002305111,0.00027905838,0.0000075977823,0.000023789062,0.000012614738,0.000009598944,0.00009170697],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99762195,0.000034323,0.00032307513,0.000593519,0.0010221056,0.00040504738],"domain_scores_gemma":[0.99929756,0.000009991831,0.00017694538,0.00035629535,0.00001852356,0.000140712],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0010002173,0.00018904639,0.0002031991,0.00023195428,0.00022226282,0.000020037765,0.00066118914,0.00013360615,0.0022729866],"category_scores_gemma":[0.000050503622,0.00017739147,0.000034605288,0.0014518909,0.002180551,0.0003287901,0.00040303252,0.00013067455,0.001651475],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009210407,0.00018856455,0.0026840763,6.3057894e-7,0.000003179787,3.264064e-7,0.0005405439,0.0010326672,0.99039966,0.00005138311,0.00022261245,0.0048671626],"study_design_scores_gemma":[0.0005937532,0.00019258464,0.017336944,0.000006349636,0.000015222894,0.000007837107,0.00046182764,0.00006451499,0.9771278,0.00064590364,0.003348375,0.00019887759],"about_ca_topic_score_codex":0.000073484945,"about_ca_topic_score_gemma":0.000058866834,"teacher_disagreement_score":0.014652868,"about_ca_system_score_codex":0.0013778253,"about_ca_system_score_gemma":0.00004763501,"threshold_uncertainty_score":0.99912584},"labels":[],"label_agreement":null},{"id":"W2093981801","doi":"10.1021/es900658n","title":"Aerobic Biodegradation of Chlorinated Ethenes in a Fractured Bedrock Aquifer: Quantitative Assessment by Compound-Specific Isotope Analysis (CSIA) and Reactive Transport Modeling","year":2009,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of New Brunswick","funders":"Bundesministerium für Bildung und Forschung","keywords":"Biodegradation; Environmental chemistry; Aquifer; Groundwater; BTEX; Isotope analysis; Reductive dechlorination; Plume; Chemistry; Geology; Geotechnical engineering; Benzene","score_opus":0.009055199644508245,"score_gpt":0.24616565947794478,"score_spread":0.23711045983343654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093981801","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99515724,0.00012908386,0.003491586,0.00057268096,0.000026270794,0.00037423088,0.000033706496,0.00003599458,0.00017917991],"genre_scores_gemma":[0.9969069,0.00033032446,0.0026102914,0.00006698619,0.000001944266,0.0000079477695,0.000053450665,0.0000054717857,0.000016706392],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981473,0.000034510416,0.0003947621,0.000645544,0.00042831767,0.00034956666],"domain_scores_gemma":[0.999459,0.000017086177,0.00019213956,0.0002460557,0.000005441468,0.000080233294],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039736225,0.00019740456,0.00031043732,0.0005116895,0.00015407422,0.000015406127,0.00036204315,0.00015664758,0.0002538941],"category_scores_gemma":[0.00000855423,0.00018045359,0.00004979328,0.002206488,0.0011064531,0.00041556437,0.00008877614,0.0002135901,0.00001425462],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002729958,0.00022776605,0.110425025,8.732293e-7,0.0000115428975,0.000002612242,0.00037288837,0.0023330518,0.88315475,0.0000736367,0.000006310303,0.0033642312],"study_design_scores_gemma":[0.0009084741,0.00047688273,0.601035,0.000014919226,0.000065991786,0.0000073983088,0.0015452096,0.03320965,0.36091793,0.0006189176,0.0007135661,0.00048604328],"about_ca_topic_score_codex":0.00018804157,"about_ca_topic_score_gemma":0.00011067863,"teacher_disagreement_score":0.5222368,"about_ca_system_score_codex":0.00047503674,"about_ca_system_score_gemma":0.000014190941,"threshold_uncertainty_score":0.7358684},"labels":[],"label_agreement":null},{"id":"W2094710996","doi":"10.1007/s002530100713","title":"On site bioremediation of hydrocarbon-contaminated Arctic tundra soils in inoculated biopiles","year":2001,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":101,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Military College of Canada; Agriculture and Agri-Food Canada; University of British Columbia","funders":"","keywords":"Bioremediation; Tundra; Environmental remediation; Environmental science; Soil contamination; Biodegradation; Environmental chemistry; Hydrocarbon; Soil water; Permafrost; Contamination; Diesel fuel; Environmental engineering; Arctic; Chemistry; Soil science; Ecology; Biology","score_opus":0.004205635414636677,"score_gpt":0.18193630740660638,"score_spread":0.1777306719919697,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094710996","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99838865,0.000051659677,0.000021451076,0.0006763418,0.00007560804,0.00027233514,0.000017336637,0.00005871925,0.00043790444],"genre_scores_gemma":[0.9990134,0.0002956584,0.00013876737,0.000412395,0.000006797143,0.0000056112476,0.000089732595,0.000008191371,0.000029398223],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99886656,0.000039171475,0.00033872115,0.00040659218,0.000038954513,0.0003099852],"domain_scores_gemma":[0.99955374,0.000057143585,0.00015616664,0.00019159389,0.0000064798323,0.00003485674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017415447,0.00018001038,0.0002695565,0.000213116,0.00004535012,0.000004211381,0.0001538682,0.00067724276,0.00028726057],"category_scores_gemma":[0.000033947403,0.00015368931,0.000027012165,0.0005066347,0.00068011053,0.00003053078,0.0001286479,0.00023861151,0.0002056281],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001527655,0.00009629702,0.027552484,0.000006202836,0.000009986437,0.0000051061197,0.00007455195,0.000010878967,0.967767,0.000749604,0.00006885165,0.0035062712],"study_design_scores_gemma":[0.0014639803,0.00026177466,0.054037616,0.000020713442,0.000014234948,0.000051686136,0.00006455118,0.000086985485,0.9411578,0.0009254399,0.0016295742,0.00028562918],"about_ca_topic_score_codex":0.0001573675,"about_ca_topic_score_gemma":0.00065223954,"teacher_disagreement_score":0.026609186,"about_ca_system_score_codex":0.00007185228,"about_ca_system_score_gemma":0.000007855151,"threshold_uncertainty_score":0.6267268},"labels":[],"label_agreement":null},{"id":"W2094728355","doi":"10.1016/j.bbrc.2005.05.045","title":"Two kinds of chlorocatechol 1,2-dioxygenase from 2,4-dichlorophenoxyacetate-degrading Sphingomonas sp. strain TFD44","year":2005,"lang":"en","type":"article","venue":"Biochemical and Biophysical Research Communications","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Scarborough Hospital; University of Toronto","funders":"","keywords":"Strain (injury); Sphingomonas; Dioxygenase; Bacteria; Escherichia coli; Substrate (aquarium); Substrate specificity; Biology; Oxygenase; Biochemistry; Chemistry; Stereochemistry; Gene; Enzyme; Pseudomonas; Genetics","score_opus":0.06048160299476375,"score_gpt":0.3424407758264449,"score_spread":0.28195917283168115,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094728355","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921068,0.00028428962,0.000019713754,0.0041670566,0.000014487235,0.0002358458,0.00020495,0.000039141174,0.0029277361],"genre_scores_gemma":[0.9938845,0.0004739886,0.0051045683,0.00015782531,0.0001018011,0.000013813581,0.00013366228,0.000013917576,0.00011591055],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981207,0.00016382162,0.00034961046,0.00038738633,0.0005745904,0.00040385188],"domain_scores_gemma":[0.9983012,0.000338252,0.000084565414,0.0009048728,0.000060171384,0.00031091983],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005060223,0.00016353113,0.00021666092,0.000058480044,0.00026869186,0.000053294745,0.0010314925,0.00011126547,0.0006150586],"category_scores_gemma":[0.00022258362,0.00013544239,0.00008086634,0.0005901943,0.0014568238,0.00015230532,0.0009460325,0.00050293864,0.00035461233],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032895317,0.00036587872,0.0005695315,0.0000054782263,0.000013509928,4.991e-7,0.00018444682,0.0000011970417,0.985949,0.0005616538,0.0011258541,0.011190078],"study_design_scores_gemma":[0.0006038954,0.00007250432,0.010173649,0.000035093628,0.000012347272,0.0000013355019,0.00014415424,0.0015321816,0.9729907,0.0012451605,0.012951118,0.00023786596],"about_ca_topic_score_codex":0.0008783408,"about_ca_topic_score_gemma":0.00011508562,"teacher_disagreement_score":0.012958283,"about_ca_system_score_codex":0.00011952521,"about_ca_system_score_gemma":0.000029551235,"threshold_uncertainty_score":0.67344606},"labels":[],"label_agreement":null},{"id":"W2094739590","doi":"10.1016/j.jhazmat.2007.10.001","title":"Biodegradation of diesel fuel-contaminated wastewater using a three-phase fluidized bed reactor","year":2007,"lang":"en","type":"article","venue":"Journal of Hazardous Materials","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":47,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"","keywords":"Wastewater; Chemical oxygen demand; Diesel fuel; Biodegradation; Fluidized bed; Environmental science; Residence time (fluid dynamics); Bioreactor; Waste management; Sewage treatment; Chemistry; Pulp and paper industry; Environmental engineering; Geology","score_opus":0.02089568412092885,"score_gpt":0.2718369222762297,"score_spread":0.25094123815530084,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094739590","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99869233,0.000033659853,0.0001852288,0.00007745654,0.00071741163,0.00017104925,0.000051124334,0.000009583114,0.0000621616],"genre_scores_gemma":[0.9975854,0.000030097905,0.0021830774,0.000044011835,0.000110875255,2.1244318e-7,0.000010883265,0.000013457816,0.000021976994],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99816847,0.00007903325,0.0009990731,0.00012953274,0.00038072388,0.00024313985],"domain_scores_gemma":[0.99869,0.000036327587,0.00095805083,0.00013761909,0.00007057983,0.00010743932],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001497893,0.0001498191,0.00038909187,0.00010880805,0.00003859485,0.000041235002,0.00018938626,0.00010515576,0.002359774],"category_scores_gemma":[0.00009587808,0.00010721979,0.000088789115,0.00015447798,0.00010148234,0.00028441736,0.000062792606,0.000065145985,0.00004944889],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006853997,0.00015915291,0.001301846,0.000018740511,0.0000296237,0.000030637122,0.00024290413,0.0000010667003,0.9961795,0.0000020752032,0.00031181163,0.0010372371],"study_design_scores_gemma":[0.001922064,0.0002365362,0.0032564614,0.000045514385,0.000048145015,0.00007062469,0.00006552294,0.00000940371,0.9936352,0.000041024254,0.00054603105,0.00012347571],"about_ca_topic_score_codex":0.00013602465,"about_ca_topic_score_gemma":0.00006551052,"teacher_disagreement_score":0.0025443085,"about_ca_system_score_codex":0.00015100985,"about_ca_system_score_gemma":0.000025697878,"threshold_uncertainty_score":0.9985522},"labels":[],"label_agreement":null},{"id":"W2094834883","doi":"10.1139/w09-005","title":"Characterization of <i>Microbacterium</i> sp. F10a and its role in polycyclic aromatic hydrocarbon removal in low-temperature soil","year":2009,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Phenanthrene; Pyrene; Chemistry; Polycyclic aromatic hydrocarbon; Microbacterium; Rhizosphere; Hydrocarbon; Food science; Bacteria; Bioremediation; Biodegradation; Arthrobacter; Environmental chemistry; Microbiology; Organic chemistry; Biology; 16S ribosomal RNA; Biochemistry","score_opus":0.003317476659540471,"score_gpt":0.16899162618148467,"score_spread":0.1656741495219442,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094834883","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998772,0.00018439334,2.3402926e-7,0.0006483351,0.00013957257,0.000100585465,0.000025612073,0.0000016600275,0.00012755393],"genre_scores_gemma":[0.9990697,0.00008762925,0.000031622443,0.00071060756,0.000026969581,1.6152518e-7,0.000025579047,0.000005728213,0.000042022257],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99897456,0.00009677444,0.00047980633,0.00014433193,0.000034799014,0.00026970005],"domain_scores_gemma":[0.9994825,0.0000107413925,0.00025844364,0.000074241594,0.00000627697,0.0001678114],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024221664,0.00012205998,0.00026598797,0.00021500258,0.000023373761,0.000013143802,0.00016228294,0.00017826761,0.00011172536],"category_scores_gemma":[0.00003376135,0.00011175575,0.0000356056,0.00024881668,0.0000801703,0.00012586344,0.000012004578,0.00020282861,0.000014599887],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024889981,0.000022210419,0.015883878,0.0000042354445,0.0000027885228,0.000055474764,0.00040024318,0.0000067889423,0.9830129,0.0000011494691,0.00004096013,0.0005444765],"study_design_scores_gemma":[0.00083601876,0.00014833326,0.34725708,0.00013387341,0.000006349776,0.0006690556,0.0000429739,0.000017957636,0.64950347,0.000038096838,0.0011800781,0.0001667418],"about_ca_topic_score_codex":0.00062839163,"about_ca_topic_score_gemma":0.0244408,"teacher_disagreement_score":0.33350945,"about_ca_system_score_codex":0.00016578498,"about_ca_system_score_gemma":0.00012314015,"threshold_uncertainty_score":0.99336064},"labels":[],"label_agreement":null},{"id":"W2094976959","doi":"10.1016/j.jhazmat.2013.07.069","title":"Recent development in the treatment of oily sludge from petroleum industry: A review","year":2013,"lang":"en","type":"review","venue":"Journal of Hazardous Materials","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1051,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Northern British Columbia","funders":"","keywords":"Waste management; Reuse; Oil sludge; Panacea (medicine); Hazardous waste; Petroleum industry; Petroleum; Environmental science; Heavy metals; Resource recovery; Sewage sludge; Sewage sludge treatment; Waste treatment; Sewage treatment; Engineering; Wastewater; Environmental engineering; Chemistry","score_opus":0.05334734835571451,"score_gpt":0.3001712893310099,"score_spread":0.2468239409752954,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094976959","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.021363722,0.97665083,2.5439815e-7,0.00023755826,0.00059154094,0.00086654106,0.00010842448,0.0000030009978,0.00017813618],"genre_scores_gemma":[0.000076711345,0.99910617,0.0002858497,0.00017990348,0.00014808435,0.000025953703,0.000045353318,0.00001819542,0.000113780356],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.996497,0.0005828469,0.0019853087,0.00019938857,0.0005056102,0.0002298877],"domain_scores_gemma":[0.9972607,0.00008503234,0.0022604526,0.0002800851,0.00002852025,0.000085206324],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010250616,0.0003474548,0.0018942035,0.00007553341,0.000030145424,0.000051571085,0.00055587554,0.00029506703,0.01046015],"category_scores_gemma":[0.000056937515,0.00017062294,0.00023415979,0.00019456413,0.000056456505,0.0000825222,0.000058540852,0.00020397603,0.0004893517],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014102346,0.0004022381,0.000037410442,0.0016213587,0.00010795167,0.00004282387,0.00021300692,2.8002796e-7,0.0020287763,3.954142e-7,0.014051477,0.9814802],"study_design_scores_gemma":[0.0002801923,0.00016738927,0.00013037083,0.009184599,0.00026184172,0.0000560275,0.000014664109,1.4403405e-8,0.0016629858,0.0000029674902,0.9880727,0.00016625228],"about_ca_topic_score_codex":0.0000675291,"about_ca_topic_score_gemma":0.000028586,"teacher_disagreement_score":0.98131394,"about_ca_system_score_codex":0.0005777801,"about_ca_system_score_gemma":0.00019508674,"threshold_uncertainty_score":0.9904444},"labels":[],"label_agreement":null},{"id":"W2095781438","doi":"10.1111/j.1751-7915.2009.00077.x","title":"Field metabolomics and laboratory assessments of anaerobic intrinsic bioremediation of hydrocarbons at a petroleum‐contaminated site","year":2009,"lang":"en","type":"article","venue":"Microbial Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Bioremediation; Environmental chemistry; Biostimulation; Biodegradation; Ethylbenzene; Chemistry; Toluene; Benzene; Alkylbenzenes; Hydrocarbon; Anaerobic bacteria; BTEX; Contamination; Bacteria; Organic chemistry; Biology; Ecology","score_opus":0.004227086936120141,"score_gpt":0.21076097053042928,"score_spread":0.20653388359430913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095781438","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99837244,0.000090960806,0.00007078726,0.0009453453,0.00010674642,0.00017707689,0.00007741005,0.00004899156,0.00011023036],"genre_scores_gemma":[0.9980467,0.00026672296,0.0012111786,0.00037439266,0.000010395016,8.9362493e-7,0.000034451758,0.0000072091975,0.000048050682],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99888533,0.000052094718,0.00039627543,0.00031544347,0.00011679505,0.00023404059],"domain_scores_gemma":[0.9993467,0.000029723671,0.0003035549,0.0002523403,0.000015449821,0.000052252064],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017837419,0.0001645615,0.00031305687,0.00016381388,0.00004723439,0.0000058596147,0.00019434854,0.0004124354,0.00018022934],"category_scores_gemma":[0.00006185721,0.00015765749,0.00004743146,0.0004315527,0.00029091653,0.000082495346,0.00017406936,0.00016035631,0.000037885307],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000076450786,0.00008859629,0.010120465,0.0000058725377,0.0000129451355,0.0000022129805,0.000057436566,0.0000021863648,0.98344827,0.00006909964,0.000504866,0.0056116036],"study_design_scores_gemma":[0.00064551726,0.00045952448,0.033152185,0.000009578172,0.00003001672,0.000005094663,0.000020385936,0.000072346294,0.9630384,0.000028680868,0.002394002,0.0001443119],"about_ca_topic_score_codex":0.00014051195,"about_ca_topic_score_gemma":0.00036321415,"teacher_disagreement_score":0.02303172,"about_ca_system_score_codex":0.00011174239,"about_ca_system_score_gemma":0.000018872175,"threshold_uncertainty_score":0.6429086},"labels":[],"label_agreement":null},{"id":"W2096581522","doi":"10.1128/aem.01191-10","title":"Anaerobic Biotransformation of High Concentrations of Chloroform by an Enrichment Culture and Two Bacterial Isolates","year":2010,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Laurentian University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biotransformation; Biodegradation; Chloroform; Food science; Chemistry; Bioaugmentation; Acclimatization; Environmental chemistry; Enrichment culture; Bacteria; Microbiology; Biology; Chromatography; Biochemistry; Microorganism; Organic chemistry; Botany; Enzyme","score_opus":0.0023602373430434546,"score_gpt":0.17476478852337912,"score_spread":0.17240455118033568,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096581522","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990051,0.00002151101,0.000030321507,0.000037144033,0.000082580875,0.00021198121,0.00042084834,0.000006892636,0.0001836268],"genre_scores_gemma":[0.99816823,0.00022798004,0.00063503435,0.000085848566,0.000014367484,0.0000029437997,0.0008390451,0.0000052331347,0.00002130467],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993624,0.000013937246,0.00024056899,0.00020327441,0.00003273205,0.0001470809],"domain_scores_gemma":[0.9997146,0.000009106128,0.00011536445,0.00009429727,0.0000012191055,0.000065376014],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007151114,0.00012425847,0.00015844911,0.000014828765,0.00006207675,0.000006897227,0.00007448022,0.00012260325,0.0009967671],"category_scores_gemma":[9.336839e-7,0.00010210406,0.000016724012,0.000034905457,0.0005326545,0.00010234311,0.000055548342,0.00008458359,0.000013317029],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029913235,0.00009542578,0.0049517294,0.000004792137,0.0000084867015,4.592341e-8,0.0004617854,0.000001886104,0.99194306,0.00015611447,0.00013087266,0.002215893],"study_design_scores_gemma":[0.0008786138,0.00014928187,0.014411847,0.0000015898667,0.000015414287,0.00000945279,0.00018400027,0.000013732108,0.97981143,0.000054964836,0.0043387134,0.00013096942],"about_ca_topic_score_codex":0.00010960311,"about_ca_topic_score_gemma":0.00009101814,"teacher_disagreement_score":0.012131634,"about_ca_system_score_codex":0.000017408973,"about_ca_system_score_gemma":0.0000027054846,"threshold_uncertainty_score":0.99991643},"labels":[],"label_agreement":null},{"id":"W2096886941","doi":"10.1023/a:1023555616462","title":"Improving the Biotreatment of Hydrocarbons-Contaminated Soils by Addition of Activated Sludge taken from the Wastewater Treatment Facilities of an Oil Refinery","year":2003,"lang":"en","type":"article","venue":"Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":47,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Armand Frappier Museum; Institut National de la Recherche Scientifique","funders":"U.S. Environmental Protection Agency","keywords":"Activated sludge; Environmental chemistry; Chemistry; Soil water; Microcosm; Oil sludge; Soil contamination; Biodegradation; Sewage treatment; Total petroleum hydrocarbon; Waste management; Environmental engineering; Pulp and paper industry; Environmental science","score_opus":0.01310341550234084,"score_gpt":0.19626545973234072,"score_spread":0.18316204422999988,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096886941","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982449,0.00005935049,0.000008840637,0.0001272528,0.000053100383,0.00016135132,0.001044113,0.000011117637,0.0002899755],"genre_scores_gemma":[0.99859035,0.00006477354,0.00015019347,0.000020933763,0.0000060633474,0.000008842273,0.000778318,0.000005686303,0.0003748585],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990071,0.00017010559,0.00031726612,0.00018508297,0.00020272979,0.00011768309],"domain_scores_gemma":[0.9993125,0.000072969866,0.00030824242,0.0002657102,0.000013315087,0.000027216782],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016029543,0.00013221873,0.00014939316,0.000018959296,0.00006295684,0.000010808528,0.000115143055,0.00007023267,0.00041991795],"category_scores_gemma":[0.000035178145,0.00006857477,0.000053528947,0.0001422154,0.000171381,0.00015303507,0.000017836905,0.000032540833,0.0000095764535],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041953277,0.00017174706,0.0014101026,0.000003895344,0.000027039538,1.124695e-7,0.0005941214,0.0000057530374,0.98185885,0.000007851606,0.00027527637,0.015603312],"study_design_scores_gemma":[0.00049735326,0.0001964076,0.00514304,0.000011574684,0.000034071767,4.2122525e-7,0.0005990316,0.0001511337,0.992004,0.000013683602,0.0012758188,0.00007349741],"about_ca_topic_score_codex":0.008043475,"about_ca_topic_score_gemma":0.0005069049,"teacher_disagreement_score":0.015529814,"about_ca_system_score_codex":0.0001249968,"about_ca_system_score_gemma":0.00001873186,"threshold_uncertainty_score":0.99856204},"labels":[],"label_agreement":null},{"id":"W2096910504","doi":"10.1139/w11-049","title":"Comparison of commercial DNA extraction kits for isolation and purification of bacterial and eukaryotic DNA from PAH-contaminated soils","year":2011,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":97,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"The Scarborough Hospital; McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"DNA extraction; Contamination; DNA; Extraction (chemistry); Soil water; Temperature gradient gel electrophoresis; Soil contamination; Chemistry; Environmental chemistry; Bacteria; Chromatography; Polymerase chain reaction; Biology; 16S ribosomal RNA; Biochemistry; Gene; Genetics; Ecology","score_opus":0.029578890892068332,"score_gpt":0.24121173599023718,"score_spread":0.21163284509816885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096910504","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989181,0.000079009056,0.00021852592,0.00007933783,0.00032446682,0.00013004498,0.00020488673,0.0000011447905,0.000044477772],"genre_scores_gemma":[0.9989375,0.000017550436,0.0008939806,0.00003387258,0.00003506377,3.5504453e-7,0.00007073142,0.000004364785,0.000006606751],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992875,0.00006964134,0.00040396772,0.00009945592,0.000022725277,0.000116713134],"domain_scores_gemma":[0.9992477,0.00005240374,0.0004864781,0.000054903296,0.000044007455,0.00011446159],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019615017,0.00007352624,0.00021727124,0.00007321834,0.000045336677,0.0000057386023,0.00007941881,0.0001253622,0.00055593124],"category_scores_gemma":[0.000050292874,0.00006777515,0.000028990242,0.000047890186,0.00020815709,0.00010337717,0.000009018969,0.0000646991,0.0000026780642],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001039882,0.000021576054,0.1042543,0.0000055770915,0.000013581641,4.6829575e-7,0.0011251154,6.454143e-7,0.8897519,0.0000073481733,0.00059079647,0.00412472],"study_design_scores_gemma":[0.00064839015,0.00026064034,0.60557175,0.000016625334,0.000036937367,0.000019696126,0.00015981593,0.00003189609,0.3921414,0.00004865265,0.0009929596,0.000071259296],"about_ca_topic_score_codex":0.002579924,"about_ca_topic_score_gemma":0.024656307,"teacher_disagreement_score":0.50131744,"about_ca_system_score_codex":0.000052924515,"about_ca_system_score_gemma":0.00005896519,"threshold_uncertainty_score":0.9931412},"labels":[],"label_agreement":null},{"id":"W2096944482","doi":"10.3390/ijms9030198","title":"Biochemical Characterization of the Tetrachlorobenzoquinone Reductase Involved in the Biodegradation of Pentachlorophenol","year":2008,"lang":"en","type":"article","venue":"International Journal of Molecular Sciences","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; College of Pharmacy and Nutrition, University of Saskatchewan; Saskatchewan Health Research Foundation; University of Saskatchewan","keywords":"Pentachlorophenol; Dehalogenase; Biodegradation; Flavin mononucleotide; Enzyme; Biochemistry; Cofactor; Chemistry; Reductase; Biology; Environmental chemistry; Organic chemistry","score_opus":0.015562819400691052,"score_gpt":0.234488671661452,"score_spread":0.21892585226076094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096944482","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981189,0.000030546344,0.00013480526,0.0012297042,0.00025407443,0.00007189182,0.000009859968,9.27556e-7,0.0001493405],"genre_scores_gemma":[0.9993077,0.000059242157,0.00037073504,0.0002295706,0.00002212366,3.5915954e-7,0.0000036393012,0.0000017183285,0.0000049064893],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985102,0.00008396824,0.00039414864,0.00008708481,0.0008531325,0.00007146707],"domain_scores_gemma":[0.99931693,0.000024630097,0.0004933318,0.00008037341,0.0000656408,0.00001908518],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051213295,0.00005642596,0.00008342622,0.00007302882,0.000038546696,0.000012370045,0.0008427678,0.000028726681,0.00011274664],"category_scores_gemma":[0.00010353824,0.00003123756,0.000070437345,0.00037688526,0.000497438,0.00018929999,0.000070986214,0.000081502105,0.000002820839],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017891023,0.000101201884,0.036373477,9.94524e-7,0.0000052203113,0.0000061142805,0.00044700457,0.00005448076,0.96251553,0.000052053936,0.000066508685,0.00035951412],"study_design_scores_gemma":[0.00020796184,0.00004925081,0.15907557,0.00002048313,0.0000042853508,0.00005381194,0.00013514314,0.000074806645,0.84017307,0.00007084729,0.00009843132,0.000036343827],"about_ca_topic_score_codex":0.000059558944,"about_ca_topic_score_gemma":0.000009844155,"teacher_disagreement_score":0.1227021,"about_ca_system_score_codex":0.0000411224,"about_ca_system_score_gemma":0.000047490354,"threshold_uncertainty_score":0.18328312},"labels":[],"label_agreement":null},{"id":"W2097564756","doi":"10.1128/jb.185.4.1253-1260.2003","title":"Characterization of Extradiol Dioxygenases from a Polychlorinated Biphenyl-Degrading Strain That Possess Higher Specificities for Chlorinated Metabolites","year":2003,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; University of British Columbia","funders":"","keywords":"Chemistry; Biphenyl; Stereochemistry; Enzyme; Substrate (aquarium); Biochemistry; Biology; Organic chemistry","score_opus":0.030827004203847805,"score_gpt":0.23459160256539113,"score_spread":0.20376459836154331,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097564756","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997643,0.00009115016,0.00040610164,0.0001396844,0.0010429199,0.00016109484,0.00036767602,0.00000996429,0.00013841303],"genre_scores_gemma":[0.99804556,0.00017150189,0.001266712,0.00008675793,0.00012998492,0.0000021637059,0.000075944794,0.000014443691,0.00020692775],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988046,0.00012999348,0.0005179188,0.00017172635,0.00014714118,0.00022858098],"domain_scores_gemma":[0.9988855,0.00011711018,0.0007462725,0.000113884475,0.000047860758,0.00008936264],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002971421,0.00016532671,0.0004217282,0.00009555368,0.000050201674,0.00002533657,0.00019187872,0.0001216695,0.0026382566],"category_scores_gemma":[0.0000779704,0.00012860468,0.00013357672,0.00016004496,0.00014995206,0.00029755212,0.000020184601,0.00010623991,0.000008143164],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001713569,0.00007194714,0.022642259,0.0000062038994,0.000057548255,0.0000053640665,0.00016917534,0.0000027045585,0.9757667,0.00026805626,0.000057214067,0.00078147225],"study_design_scores_gemma":[0.0006861607,0.00017889004,0.35183328,0.000019151212,0.000033384676,0.000025461984,0.00009658818,0.0000060724083,0.6277486,0.00015972785,0.019081924,0.00013078416],"about_ca_topic_score_codex":0.000027704727,"about_ca_topic_score_gemma":0.000007206076,"teacher_disagreement_score":0.3480181,"about_ca_system_score_codex":0.00007377655,"about_ca_system_score_gemma":0.00002542423,"threshold_uncertainty_score":0.9982735},"labels":[],"label_agreement":null},{"id":"W2098388720","doi":"10.1021/es3010317","title":"Large Carbon Isotope Fractionation during Biodegradation of Chloroform by <i>Dehalobacter</i> Cultures","year":2012,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Chemistry; Reductive dechlorination; Biodegradation; Environmental chemistry; Dehalococcoides; Vinyl chloride; Trichloroethylene; Chloroform; Isotopes of carbon; Dichloromethane; Isotope analysis; Fractionation; Isotope fractionation; Organic chemistry; Total organic carbon; Solvent; Ecology","score_opus":0.003040925160998991,"score_gpt":0.20127295196716974,"score_spread":0.19823202680617075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2098388720","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997081,0.00007824278,0.000031607986,0.00028229444,0.00017995544,0.00019720184,0.00004505228,0.00005897306,0.0020456782],"genre_scores_gemma":[0.99931157,0.000094288436,0.00018677273,0.00007270317,0.000019819508,0.0000075579246,0.000031202297,0.000007222234,0.00026884506],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99850345,0.00001372978,0.00024130606,0.00030688173,0.0004516524,0.00048297353],"domain_scores_gemma":[0.99948215,0.0000059560903,0.00018814606,0.00021883927,0.0000033329832,0.000101565405],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00030233778,0.00014024349,0.00011659834,0.00013916304,0.00023128379,0.000012176708,0.00034232688,0.00014214605,0.0012353315],"category_scores_gemma":[0.000028359598,0.00012285785,0.00003046234,0.00071443873,0.0008677455,0.0006609213,0.00027875372,0.00012933655,0.0002221834],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004487691,0.00014668175,0.25397122,0.0000011591306,0.0000015402119,1.2534466e-7,0.00013409066,0.0000021041012,0.74483746,0.00003580241,0.000113409624,0.0007519113],"study_design_scores_gemma":[0.0002043936,0.000030545,0.20552386,0.0000025896477,0.0000046639434,0.000007674503,0.00033049422,0.000029232915,0.78437716,0.000024666375,0.009335055,0.00012967207],"about_ca_topic_score_codex":0.000041441115,"about_ca_topic_score_gemma":0.0000129373275,"teacher_disagreement_score":0.048447344,"about_ca_system_score_codex":0.00049724226,"about_ca_system_score_gemma":0.0000062046915,"threshold_uncertainty_score":0.99967766},"labels":[],"label_agreement":null},{"id":"W2098461474","doi":"10.1139/cjm-2014-0095","title":"Cometabolic degradation of trichloroethylene by<i>Burkholderia cepacia</i>G4 with poplar leaf homogenate","year":2014,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Environmental Health Sciences","keywords":"Trichloroethylene; Burkholderia; Toluene; Chemistry; Cometabolism; Biodegradation; Benzene; Bioremediation; Microbiology; Bacteria; Phenol; Degradation (telecommunications); Organic chemistry; Biology","score_opus":0.0054528484558651474,"score_gpt":0.1730857623242433,"score_spread":0.16763291386837814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2098461474","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981256,0.0002534537,0.0001943647,0.0005287569,0.00025609063,0.00008298154,0.0001380405,0.0000031301333,0.00041754838],"genre_scores_gemma":[0.998326,0.000055788394,0.0006542091,0.000577239,0.00003538233,3.1118367e-7,0.000046846122,0.000010902088,0.00029333046],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99897254,0.00013022569,0.00038809792,0.00014569642,0.000064225744,0.00029924826],"domain_scores_gemma":[0.99904984,0.000038885166,0.0004137921,0.00013550796,0.000055466237,0.00030651744],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00039870307,0.00013417716,0.00029398716,0.0001364521,0.00007171697,0.000013365652,0.0002804328,0.000119995544,0.0015199606],"category_scores_gemma":[0.00007416437,0.00010227961,0.000055785993,0.00024878661,0.00031274016,0.00009976183,0.000015077024,0.00014734751,0.0000829806],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026266162,0.0000157635,0.022747887,0.0000033111985,0.00002090885,0.0000049358628,0.00008867153,0.000016976943,0.9588446,0.000013632774,0.016125444,0.002091609],"study_design_scores_gemma":[0.0013989056,0.00048815936,0.0126169,0.000019730473,0.0000492828,0.0003817619,0.00006824826,0.000007102738,0.65104234,0.000021077909,0.33365664,0.00024985507],"about_ca_topic_score_codex":0.0025211165,"about_ca_topic_score_gemma":0.019242516,"teacher_disagreement_score":0.3175312,"about_ca_system_score_codex":0.00010769379,"about_ca_system_score_gemma":0.0001357026,"threshold_uncertainty_score":0.9993928},"labels":[],"label_agreement":null},{"id":"W2098624656","doi":"10.1128/aem.69.1.191-198.2003","title":"Carbon and Hydrogen Isotopic Fractionation during Anaerobic Biodegradation of Benzene","year":2003,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":174,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biodegradation; Benzene; Chemistry; Environmental chemistry; Anaerobic exercise; Fractionation; Isotope fractionation; Carbon fibers; Organic chemistry; Materials science; Biology","score_opus":0.0033222146688603755,"score_gpt":0.15742643677815701,"score_spread":0.15410422210929664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2098624656","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987019,0.000087003704,0.000006072243,0.000031987638,0.000029603008,0.00014809711,0.000020379179,0.0000085295815,0.00096644793],"genre_scores_gemma":[0.99923545,0.00024409922,0.00028730198,0.00007036721,0.0000068533363,0.0000033842512,0.0000686127,0.0000062543786,0.00007766754],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993967,0.00002640484,0.00016430451,0.00024274476,0.000037136313,0.00013270021],"domain_scores_gemma":[0.99978155,0.000011708609,0.0000850971,0.00007935179,6.1459065e-7,0.000041661533],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006957841,0.00010657451,0.00011409986,0.000028496437,0.00006428311,0.000003965585,0.00003656881,0.00009526847,0.00044214792],"category_scores_gemma":[0.0000027926758,0.00009982469,0.000014324261,0.000047021334,0.0001960089,0.00003919987,0.000051693667,0.000053823853,0.000022055969],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000071919676,0.00003320198,0.044505518,0.0000041698654,0.0000068667914,2.5063565e-7,0.00007021035,0.000009934451,0.9545634,0.000059746788,0.0000090491585,0.0007304828],"study_design_scores_gemma":[0.0005529072,0.000035772384,0.13479972,0.0000020561097,0.000012215304,0.000028849401,0.00011862186,0.000014812735,0.8620115,0.00009415988,0.002187574,0.00014179951],"about_ca_topic_score_codex":0.000039003407,"about_ca_topic_score_gemma":0.000017646978,"teacher_disagreement_score":0.092551865,"about_ca_system_score_codex":0.000052698586,"about_ca_system_score_gemma":0.0000019411304,"threshold_uncertainty_score":0.48412097},"labels":[],"label_agreement":null},{"id":"W2099586826","doi":"10.1128/aem.69.1.275-284.2003","title":"Degradation of Polycyclic Aromatic Hydrocarbons at Low Temperature under Aerobic and Nitrate-Reducing Conditions in Enrichment Cultures from Northern Soils","year":2003,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":260,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Science Council","keywords":"Biodegradation; Phenanthrene; Environmental chemistry; Enrichment culture; Chemistry; Pyrene; Polycyclic aromatic hydrocarbon; Biology; Organic chemistry; Bacteria","score_opus":0.003927279768828506,"score_gpt":0.18147842523546553,"score_spread":0.17755114546663703,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099586826","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99909705,0.00016002111,0.0000029059531,0.00005234489,0.000039934584,0.00022991597,0.00006651885,0.000008326934,0.00034296862],"genre_scores_gemma":[0.9988045,0.00016206162,0.00013679886,0.00026424724,0.000006075366,0.000009438497,0.00048381207,0.0000095392925,0.00012353774],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990928,0.00005575986,0.0002530415,0.00034455437,0.000047189384,0.00020665112],"domain_scores_gemma":[0.9996813,0.00003629479,0.000102026606,0.000114247705,1.7302891e-7,0.000065955996],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006418785,0.0001764832,0.00019245272,0.000032210693,0.00009817123,0.000009433144,0.00005989513,0.00015099159,0.00028584807],"category_scores_gemma":[0.0000026770251,0.00015067104,0.00002401925,0.000067027875,0.00034371074,0.00004587734,0.000063896485,0.000099788514,0.000059476446],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010161355,0.000110459645,0.02960099,0.0000023249809,0.000014190666,7.731642e-7,0.0003489499,0.000045494067,0.9696925,0.000011300371,0.000084127,0.0000787199],"study_design_scores_gemma":[0.0011837756,0.000057335306,0.17075118,0.00001770266,0.00002971398,0.0000293996,0.001048976,0.000010362054,0.82586026,0.0005100945,0.00018887308,0.0003123213],"about_ca_topic_score_codex":0.0001957183,"about_ca_topic_score_gemma":0.00066417974,"teacher_disagreement_score":0.14383225,"about_ca_system_score_codex":0.0001338676,"about_ca_system_score_gemma":0.000004722621,"threshold_uncertainty_score":0.6144186},"labels":[],"label_agreement":null},{"id":"W2100134595","doi":"","title":"TOXICITY OF PETROLEUM HYDROCARBONS IN POLAR SOIL","year":2011,"lang":"en","type":"article","venue":"University Library - University of Saskatchewan (University of Saskatchewan)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Australian Antarctic Division; Natural Sciences and Engineering Research Council of Canada","keywords":"Petroleum; Toxicity; Polar; Environmental science; Geology; Environmental chemistry; Chemistry; Paleontology","score_opus":0.0073692981327064715,"score_gpt":0.14242634201983598,"score_spread":0.1350570438871295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100134595","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98589885,0.00001664668,0.00037950953,0.00023694444,0.00007172083,0.00023530619,0.00032204972,0.00008353944,0.012755457],"genre_scores_gemma":[0.9870225,0.00009909882,0.005656684,0.000037703827,0.000007943866,3.9157397e-9,0.000050503655,0.000017666202,0.0071079046],"study_design_codex":"observational","study_design_gemma":"qualitative","domain_scores_codex":[0.9979876,0.00021203097,0.00027792866,0.0006006571,0.00045327444,0.0004684876],"domain_scores_gemma":[0.9984844,0.00006731804,0.00056898315,0.00054150424,0.000025235777,0.00031257592],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021623095,0.0003204542,0.0006598789,0.0004637294,0.00020128481,0.0000048409775,0.0014310452,0.00035866426,0.0063251946],"category_scores_gemma":[0.000006988397,0.00046196787,0.0003632964,0.0010965654,0.0014812073,0.0016561325,0.00097245345,0.0003372282,0.000105790394],"study_design_candidate":"qualitative","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026211722,0.001964314,0.48435888,0.00017194147,0.000279854,0.00055850757,0.37113696,0.0001558145,0.13569224,0.00005414455,0.0013481623,0.0016580265],"study_design_scores_gemma":[0.0036643166,0.0004420452,0.14582926,0.00013771879,0.00018538382,0.000006431677,0.807593,0.00024702656,0.03819032,0.00029983826,0.0026459105,0.00075877813],"about_ca_topic_score_codex":0.06865953,"about_ca_topic_score_gemma":0.049673475,"teacher_disagreement_score":0.436456,"about_ca_system_score_codex":0.0002097067,"about_ca_system_score_gemma":0.00031832326,"threshold_uncertainty_score":0.9997832},"labels":[],"label_agreement":null},{"id":"W2100251571","doi":"10.1002/aic.10744","title":"Modeling for batch phenol biodegradation with immobilized <i>Alcaligenes faecalis</i>","year":2005,"lang":"en","type":"article","venue":"AIChE Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of New Brunswick","funders":"Program for New Century Excellent Talents in University; Natural Science Foundation of Tianjin City; National Natural Science Foundation of China","keywords":"Biodegradation; Phenol; Alcaligenes faecalis; Alcaligenes; Polyurethane; Chemistry; Chemical engineering; Diffusion; Degradation (telecommunications); Batch reactor; Chromatography; Organic chemistry; Materials science; Bacteria; Thermodynamics; Catalysis; Pseudomonas","score_opus":0.01240352854546366,"score_gpt":0.22654260535229437,"score_spread":0.2141390768068307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100251571","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.953716,0.0000604279,0.042864725,0.0023386327,0.00011851723,0.000229099,0.000014211316,0.000027689066,0.0006306986],"genre_scores_gemma":[0.97925264,0.000083175626,0.019122966,0.00090849533,0.00022522938,0.0000039270235,0.00001199163,0.000013198127,0.00037838102],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99908465,0.00002941033,0.0002510732,0.00016323921,0.00023691966,0.00023472623],"domain_scores_gemma":[0.99964106,0.00001894028,0.000095524614,0.00009927624,0.00002819213,0.00011698944],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003571302,0.00011363931,0.00011100353,0.00002455794,0.00018780748,0.000080894235,0.00014918871,0.00006050405,0.0011125167],"category_scores_gemma":[0.000022740704,0.00007784799,0.000058375324,0.00011905527,0.00003996209,0.00028775155,0.000025771458,0.000105152765,0.00015316419],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029088798,0.00020553208,0.006688268,0.000007050573,0.000039406754,0.0000023640332,0.00066690875,0.03478019,0.886281,0.000026660198,0.013109228,0.05790248],"study_design_scores_gemma":[0.006760011,0.00057626533,0.001659268,0.00006632272,0.00015327136,0.000278086,0.0006527782,0.36060366,0.4046136,0.0005028201,0.22301929,0.0011146199],"about_ca_topic_score_codex":0.00003850956,"about_ca_topic_score_gemma":0.0001789618,"teacher_disagreement_score":0.4816674,"about_ca_system_score_codex":0.0001227615,"about_ca_system_score_gemma":0.000021635573,"threshold_uncertainty_score":0.9998006},"labels":[],"label_agreement":null},{"id":"W2100338956","doi":"10.1128/aem.68.11.5537-5548.2002","title":"Robust Hydrocarbon Degradation and Dynamics of Bacterial Communities during Nutrient-Enhanced Oil Spill Bioremediation","year":2002,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":496,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Bedford Institute of Oceanography","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Microcosm; Bioremediation; Temperature gradient gel electrophoresis; Nutrient; Biology; Microbial population biology; Environmental chemistry; Biodegradation; Ecology; Bacteria; Chemistry; 16S ribosomal RNA; Contamination","score_opus":0.00806162207951596,"score_gpt":0.1532896805108165,"score_spread":0.14522805843130054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100338956","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985587,0.00004985222,0.00003640591,0.00009123789,0.00007048552,0.000101962905,0.00011213571,0.0000152581,0.0009639821],"genre_scores_gemma":[0.99741346,0.001460505,0.0002670338,0.00009402195,0.000015559697,0.000003919547,0.00063622155,0.000010576345,0.00009872233],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992869,0.00004158101,0.0002314468,0.00020955058,0.000050599665,0.00017990396],"domain_scores_gemma":[0.9996727,0.000024332574,0.00013347063,0.0001168857,9.768646e-7,0.000051599396],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007650695,0.00015275985,0.00016741463,0.00003563256,0.000087784916,0.0000115517,0.00008006844,0.00011907739,0.0011155683],"category_scores_gemma":[0.000002194661,0.00014439477,0.000020262836,0.0000492869,0.00044400553,0.00006846451,0.0001706805,0.00008791415,0.00004547048],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027065227,0.000063335894,0.0051326468,0.000011143149,0.000007821926,2.2505036e-7,0.0006321566,0.000017724016,0.991006,0.000048794234,0.000024365998,0.0030286834],"study_design_scores_gemma":[0.0041412814,0.00025771934,0.08362507,0.000029940677,0.000061762286,0.000050844243,0.0029467004,0.0015868726,0.9048893,0.0001265731,0.001462564,0.0008213671],"about_ca_topic_score_codex":0.00005940531,"about_ca_topic_score_gemma":0.00018875817,"teacher_disagreement_score":0.08611674,"about_ca_system_score_codex":0.00008837209,"about_ca_system_score_gemma":0.0000010556728,"threshold_uncertainty_score":0.9997975},"labels":[],"label_agreement":null},{"id":"W2100753588","doi":"10.1016/j.envpol.2009.10.026","title":"Effects of temperature and fertilization on total vs. active bacterial communities exposed to crude and diesel oil pollution in NW Mediterranean Sea","year":2009,"lang":"en","type":"article","venue":"Environmental Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Rimouski","funders":"Ministère de l'Education Nationale, de l'Enseignement Superieur et de la Recherche; Canada Research Chairs","keywords":"Microcosm; Human fertilization; Temperature gradient gel electrophoresis; Microbial population biology; Seawater; Mediterranean climate; Diesel fuel; Environmental chemistry; Biodegradation; Chemistry; Biology; Bacteria; 16S ribosomal RNA; Ecology; Agronomy","score_opus":0.005790421592437328,"score_gpt":0.193367629879748,"score_spread":0.18757720828731067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100753588","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986567,0.000026336429,0.0000040682985,0.00072265393,0.00011578015,0.00024509008,0.000086569846,0.000013944633,0.0001288414],"genre_scores_gemma":[0.9989622,0.00012467142,0.00004807891,0.0006563232,0.000035853256,0.0000034467912,0.00009710599,0.000007676989,0.000064649095],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990787,0.000121515186,0.00019474723,0.00020750854,0.00021671086,0.00018080455],"domain_scores_gemma":[0.99970555,0.000021736618,0.000073249976,0.00010392772,0.0000011437184,0.00009437579],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000095997406,0.00016634742,0.00016010608,0.00007399509,0.00009625611,0.00001984435,0.00006329463,0.00011643581,0.00017364045],"category_scores_gemma":[0.000017748624,0.00015492844,0.000022545857,0.000102628146,0.00016433079,0.0002301412,0.00007074732,0.000111556095,0.000018504545],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004995991,0.0001669013,0.0025514401,0.000009572629,0.0000036530193,0.0000013362078,0.002703793,0.0000777712,0.9821748,0.0000040504196,0.00011624182,0.011690814],"study_design_scores_gemma":[0.00084236544,0.00041252238,0.6951233,0.000036293,0.0000067803303,0.0000029442729,0.00031326062,0.00009287723,0.30293944,0.0000106433345,0.000091414986,0.00012814744],"about_ca_topic_score_codex":0.000083880564,"about_ca_topic_score_gemma":0.00014148037,"teacher_disagreement_score":0.6925719,"about_ca_system_score_codex":0.00024340306,"about_ca_system_score_gemma":0.0000032037792,"threshold_uncertainty_score":0.63177985},"labels":[],"label_agreement":null},{"id":"W2100970264","doi":"10.1139/cjm-2013-0698","title":"Bioremediation of oily hypersaline soil and water via potassium and magnesium amendment","year":2013,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Kuwait University","keywords":"Bioremediation; Magnesium; Amendment; Potassium; Environmental chemistry; Chemistry; Hydrocarbon; Contamination; Biology; Ecology; Organic chemistry","score_opus":0.004831225867451244,"score_gpt":0.16420950253906766,"score_spread":0.15937827667161641,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100970264","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972133,0.00014745348,0.000013308978,0.0021913697,0.0002194755,0.00008723739,0.000024505263,0.0000014325641,0.000101906655],"genre_scores_gemma":[0.99901503,0.000030126163,0.0002868495,0.00050766236,0.00003847374,4.7452062e-7,0.000010553413,0.000005199509,0.00010565398],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993002,0.000047624537,0.00029030602,0.00010891552,0.000034140394,0.00021882827],"domain_scores_gemma":[0.9994896,0.000012434886,0.00013869858,0.000060644074,0.00003384765,0.00026478624],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001897114,0.000090053414,0.00015936045,0.00008845028,0.000043280685,0.000013546859,0.000090463036,0.00009069945,0.0022227617],"category_scores_gemma":[0.000014849058,0.00006165251,0.000025142566,0.000045021934,0.0003083614,0.00007198857,0.00002662215,0.00008018227,0.0000742211],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005486513,0.0000070415167,0.02986064,0.0000059731115,0.000006190239,0.0000040675227,0.00023827168,0.0000039246875,0.9656092,0.00000125648,0.0021548714,0.00210308],"study_design_scores_gemma":[0.0012077598,0.0004626402,0.08658348,0.000014368324,0.00004401273,0.00056683744,0.00022465178,0.000041536452,0.89562094,0.000118749354,0.014847159,0.00026787157],"about_ca_topic_score_codex":0.0045720288,"about_ca_topic_score_gemma":0.007900928,"teacher_disagreement_score":0.069988266,"about_ca_system_score_codex":0.00007023644,"about_ca_system_score_gemma":0.00004103307,"threshold_uncertainty_score":0.99868935},"labels":[],"label_agreement":null},{"id":"W2101461733","doi":"10.1002/9780470057339.vnn170","title":"Soil Contamination and Remediation","year":2012,"lang":"en","type":"other","venue":"Encyclopedia of Environmetrics","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Contamination; Environmental remediation; Environmental science; Soil contamination; Environmental chemistry; Groundwater contamination; Contaminated land; Pollution; Soil water; Groundwater; Ecology; Chemistry; Aquifer; Soil science; Geology; Biology","score_opus":0.006300893243616996,"score_gpt":0.19641907672424763,"score_spread":0.19011818348063064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101461733","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007527678,0.0010763085,0.00020830194,0.00004881157,0.0005899561,0.000335314,0.000088791654,0.000053483833,0.99007136],"genre_scores_gemma":[0.04124603,0.02883929,0.003004928,0.0001315188,0.0005149285,0.000008185112,0.00024335444,0.0002960524,0.9257157],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988394,0.000046955414,0.00026528724,0.0002695529,0.00037034592,0.00020848526],"domain_scores_gemma":[0.9991949,0.0000618086,0.00040295286,0.00021857294,0.0000026694356,0.000119050856],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00022887219,0.0002061091,0.00023818002,0.00022731975,0.00002293128,0.0000061775095,0.00013756721,0.00034318937,0.016774448],"category_scores_gemma":[0.00015742038,0.00019505074,0.00004160174,0.0003331391,0.00018840074,0.00008443521,0.00013851546,0.00012956238,0.00096063234],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006801945,0.00018131551,0.17799835,0.00006980056,0.000025218596,0.0000018125085,0.00021410717,0.0000037514405,0.003583305,0.000048966147,0.73384285,0.08402374],"study_design_scores_gemma":[0.00020944884,0.000027167805,0.082610816,0.000012144355,0.000038632337,0.0000010712693,0.000010024903,0.000008931626,0.00044209635,0.0000112235,0.9164108,0.00021762816],"about_ca_topic_score_codex":0.00015915182,"about_ca_topic_score_gemma":0.000113114525,"teacher_disagreement_score":0.18256798,"about_ca_system_score_codex":0.00007340352,"about_ca_system_score_gemma":0.000006296739,"threshold_uncertainty_score":0.99981725},"labels":[],"label_agreement":null},{"id":"W2101683244","doi":"10.3389/fmicb.2013.00341","title":"Diversity of reductive dehalogenase genes from environmental samples and enrichment cultures identified with degenerate primer PCR screens","year":2013,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Strategic Environmental Research and Development Program; Ontario Genomics Institute; Government of Canada; Government of Ontario; Genome Canada; Ontario Genomics; Joint Genome Institute","keywords":"Dehalogenase; Reductive dechlorination; Biology; Metagenomics; Enrichment culture; Gene; Thermococcus; Genetics; Biochemistry; Archaea; Bacteria; Contamination","score_opus":0.008798991493899828,"score_gpt":0.1829372857233055,"score_spread":0.1741382942294057,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101683244","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99837166,0.00047867728,0.000279628,0.000071456845,0.00017004414,0.00032538993,0.00025734433,0.000007795185,0.000037976715],"genre_scores_gemma":[0.9868761,0.00025624174,0.012388384,0.000117125164,0.000015667045,0.000004685587,0.00016858197,0.0000064990822,0.0001667503],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99904937,0.00009839908,0.000176637,0.00038853023,0.00006129179,0.00022579063],"domain_scores_gemma":[0.999652,0.000014040614,0.00012192633,0.00014201802,0.000005408746,0.000064601125],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007447005,0.0001586001,0.00022283786,0.000043611803,0.00013848164,0.000008518637,0.00017122684,0.000113911294,0.00084673567],"category_scores_gemma":[0.000005376479,0.00012162592,0.000028885708,0.00007394544,0.0006147979,0.000110134475,0.0004839819,0.00007826282,0.000043817752],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032003827,0.000055358043,0.43387103,0.0000011191206,0.000025367475,0.0000013206147,0.00048233767,0.000009554818,0.561025,6.962218e-7,0.0037799594,0.0007162012],"study_design_scores_gemma":[0.0005941681,0.000068858084,0.542453,0.0000054642665,0.000023563693,0.0000053793055,0.0006659861,0.000011099463,0.45486847,0.00005754564,0.0010631512,0.00018330438],"about_ca_topic_score_codex":0.0022943097,"about_ca_topic_score_gemma":0.0003692017,"teacher_disagreement_score":0.108581975,"about_ca_system_score_codex":0.00011347038,"about_ca_system_score_gemma":0.0000058663877,"threshold_uncertainty_score":0.92711616},"labels":[],"label_agreement":null},{"id":"W2102132686","doi":"10.1007/s10532-015-9732-7","title":"Bioaugmentation of soil contaminated with high-level crude oil through inoculation with mixed cultures including Acremonium sp.","year":2015,"lang":"en","type":"article","venue":"Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":47,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Fundamental Research Funds for the Central Universities; Central University Basic Research Fund of China","keywords":"Bioaugmentation; Acremonium; Bioremediation; Soil contamination; Food science; Contamination; Chemistry; Inoculation; Biodegradation; Environmental chemistry; Human decontamination; Microbiology; Biology; Horticulture; Botany; Waste management; Organic chemistry","score_opus":0.049807380144854835,"score_gpt":0.25793862690439595,"score_spread":0.20813124675954112,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102132686","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959261,0.000017454195,0.0025298493,0.00031952013,0.00010714994,0.00015496137,0.00005576828,0.000047522037,0.0008416885],"genre_scores_gemma":[0.98904794,0.000021069878,0.0098583745,0.00008262608,0.000024605564,0.0000053934236,0.00062971073,0.0000120801205,0.00031820653],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987689,0.000068819914,0.00026014008,0.00026917094,0.00046769765,0.00016525817],"domain_scores_gemma":[0.99937683,0.000015415388,0.000308973,0.0001498369,0.000079060985,0.000069868256],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019312177,0.00016305556,0.00015101253,0.00004062475,0.000087639724,0.000035326568,0.000101272846,0.00009236318,0.00010810131],"category_scores_gemma":[0.00002678364,0.00011294975,0.000019582738,0.00040751285,0.00014604285,0.0005642297,0.000044132223,0.00006127436,0.000074266005],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046398686,0.00016688218,0.13319744,0.000023538854,0.00003350126,0.0000030480755,0.0020882396,0.00079086056,0.8535144,0.00014603729,0.002169246,0.0074028326],"study_design_scores_gemma":[0.0021043753,0.00027101842,0.20423728,0.00004895792,0.00004307732,0.0000072229877,0.0008391425,0.000516858,0.79079056,0.00004039496,0.000836849,0.00026424916],"about_ca_topic_score_codex":0.0021979588,"about_ca_topic_score_gemma":0.0036239761,"teacher_disagreement_score":0.07103984,"about_ca_system_score_codex":0.0002193434,"about_ca_system_score_gemma":0.000033824635,"threshold_uncertainty_score":0.4605957},"labels":[],"label_agreement":null},{"id":"W2102910305","doi":"10.2174/1874285800802010100","title":"The Catalytic Product of Pentachlorophenol 4-Monooxygenase is Tetra-chlorohydroquinone rather than Tetrachlorobenzoquinone","year":2008,"lang":"en","type":"article","venue":"The Open Microbiology Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; College of Pharmacy and Nutrition, University of Saskatchewan; Saskatchewan Health Research Foundation; University of Saskatchewan","keywords":"Pentachlorophenol; Monooxygenase; Chemistry; Catalysis; Reagent; Redox; Glutathione; Bioremediation; Biodegradation; Hydroxylation; Enzyme; Biochemistry; Organic chemistry; Bacteria; Cytochrome P450; Biology","score_opus":0.019559201301734493,"score_gpt":0.2387102451208278,"score_spread":0.2191510438190933,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102910305","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99185884,0.00063397497,0.00001627267,0.0033770797,0.0005330617,0.0006767082,0.00006976197,0.000011291125,0.0028230152],"genre_scores_gemma":[0.99164075,0.0007979462,0.00020745794,0.0008899325,0.00012694193,0.0000052038718,0.00001181963,0.00002475828,0.0062952177],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99790865,0.0002872371,0.0006740483,0.00037325782,0.00018727618,0.0005695564],"domain_scores_gemma":[0.9984945,0.00012753396,0.0005437578,0.00065154146,0.00004698836,0.00013565471],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0014403377,0.00027107398,0.00033176824,0.00003885148,0.0012990438,0.00009827571,0.0022692294,0.00010365978,0.003334701],"category_scores_gemma":[0.00007795324,0.00013790446,0.0001598338,0.00029359604,0.0014148931,0.00027868684,0.00068903615,0.0005199959,0.0011817955],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001917144,0.00013911849,0.008403114,0.000001927658,0.000081751445,0.000024523557,0.0012864992,0.000015572317,0.95211405,0.000007308178,0.03588889,0.0018455419],"study_design_scores_gemma":[0.0016511278,0.00030153163,0.024667399,0.000022295313,0.00007405664,0.005843832,0.0004487399,0.000019953906,0.89656013,0.00015790602,0.06979984,0.00045319737],"about_ca_topic_score_codex":0.0003277792,"about_ca_topic_score_gemma":0.00022464753,"teacher_disagreement_score":0.055553917,"about_ca_system_score_codex":0.00013526088,"about_ca_system_score_gemma":0.00009428589,"threshold_uncertainty_score":0.9995959},"labels":[],"label_agreement":null},{"id":"W2102946968","doi":"","title":"An In-Situ Soil Washing System for Diesel Fuel Contaminated Soils","year":2010,"lang":"en","type":"article","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University","funders":"","keywords":"Environmental remediation; Contamination; Diesel fuel; Environmental science; Soil contamination; Soil water; Waste management; Petroleum; Human decontamination; Environmental engineering; Environmental chemistry; Soil science; Geology; Chemistry; Engineering","score_opus":0.008196380883880547,"score_gpt":0.2236802632132542,"score_spread":0.21548388232937365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102946968","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9727978,0.00000190011,0.000142589,0.00011196619,0.00034207889,0.00025265777,0.000009964211,0.00007078518,0.026270263],"genre_scores_gemma":[0.9984593,0.0000019239228,0.0007794113,0.00018676814,0.00003443259,0.000007283233,0.00001602815,0.000008050612,0.0005068451],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99922097,0.000020833855,0.00018353152,0.00022693566,0.000116025556,0.0002316766],"domain_scores_gemma":[0.9996538,0.000029491257,0.000049660677,0.00016335821,0.000008756955,0.00009494308],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033930448,0.00009428929,0.00010862109,0.000024776138,0.00005754523,0.00004383089,0.00018635576,0.00009655876,0.00044352163],"category_scores_gemma":[0.000027133043,0.00007403033,0.0000288254,0.00010140581,0.000056933455,0.00021785786,0.000041221094,0.00009701661,0.00030057936],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011740707,0.000041785777,0.011531834,0.000013710688,0.0000015099833,0.000001031869,0.00022813107,0.000006564891,0.9851748,0.00015817762,0.000682876,0.0021478818],"study_design_scores_gemma":[0.0014414154,0.00010152748,0.122380935,0.000017448965,0.000008101971,0.0000067262945,0.0010626077,0.003603494,0.8646593,0.000053584048,0.0062886765,0.00037620126],"about_ca_topic_score_codex":0.00034499183,"about_ca_topic_score_gemma":0.020727336,"teacher_disagreement_score":0.12051547,"about_ca_system_score_codex":0.000069092384,"about_ca_system_score_gemma":0.0000075718885,"threshold_uncertainty_score":0.99714184},"labels":[],"label_agreement":null},{"id":"W2102947761","doi":"10.1007/s10295-003-0042-4","title":"Accelerated biodegradation of petroleum hydrocarbon waste","year":2003,"lang":"en","type":"article","venue":"Journal of Industrial Microbiology & Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":195,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Devon Energy (Canada); University of Waterloo","funders":"","keywords":"Bioaugmentation; Biodegradation; Petroleum; Environmental science; Hydrocarbon; Bioremediation; Waste management; Hazardous waste; Oil refinery; Pulp and paper industry; Biofilter; Contamination; Chemistry; Environmental chemistry; Environmental engineering; Ecology; Biology; Engineering; Organic chemistry","score_opus":0.02328193512568779,"score_gpt":0.21910261093886638,"score_spread":0.19582067581317858,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102947761","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971722,0.00008773837,0.00009485696,0.0011895391,0.0008467233,0.00012254454,0.000021239044,0.000017520028,0.00044764215],"genre_scores_gemma":[0.9990134,0.00011570239,0.00059363124,0.00012347093,0.000062697196,4.2916324e-7,0.00000958026,0.000009639334,0.000071444825],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983411,0.00020939096,0.0008539072,0.00021106632,0.00008943,0.00029514276],"domain_scores_gemma":[0.99862015,0.00004724211,0.0010300048,0.00019507975,0.000041709332,0.00006579025],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00063917984,0.00017928478,0.00042810352,0.00025296252,0.00004967069,0.000007959623,0.00038205658,0.001007395,0.0009635452],"category_scores_gemma":[0.0003467123,0.00014098776,0.00012337611,0.0005102903,0.00048794836,0.00010274133,0.00007872568,0.00058643206,0.00007015456],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001005128,0.0001014838,0.006793627,0.0000011980861,0.00003938611,0.000007011734,0.000017453664,0.000030856696,0.9867186,0.000086107524,0.0037438185,0.0023599253],"study_design_scores_gemma":[0.0014873841,0.00056187133,0.00009665131,0.000017120827,0.000030373934,0.00026842183,0.00009473947,0.0000068086265,0.965449,0.00006684065,0.031790767,0.00013005894],"about_ca_topic_score_codex":0.000027081996,"about_ca_topic_score_gemma":0.000019731817,"teacher_disagreement_score":0.028046949,"about_ca_system_score_codex":0.00014410078,"about_ca_system_score_gemma":0.00007823185,"threshold_uncertainty_score":0.9999497},"labels":[],"label_agreement":null},{"id":"W2103038967","doi":"10.1074/jbc.275.17.12430","title":"Steady-state Kinetic Characterization and Crystallization of a Polychlorinated Biphenyl-transforming Dioxygenase","year":2000,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Concordia University","funders":"National Center for Research Resources; National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; Institut national de la recherche scientifique; National Institutes of Health; Concordia University; Basic Energy Sciences; Purdue University; U.S. Department of Energy","keywords":"Polychlorinated biphenyl; Crystallization; Kinetic energy; Biphenyl; Dioxygenase; Characterization (materials science); Steady state (chemistry); Chemistry; Thermodynamics; Environmental chemistry; Materials science; Physical chemistry; Physics; Enzyme; Biochemistry; Nanotechnology; Organic chemistry; Classical mechanics","score_opus":0.010416180619489726,"score_gpt":0.20483295208892188,"score_spread":0.19441677146943215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2103038967","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99903786,0.0000256013,0.0003468385,0.00006649395,0.0000190643,0.000045822075,0.000017864719,0.0000056432154,0.00043482363],"genre_scores_gemma":[0.99891865,0.00053919206,0.00013049693,0.00004784593,0.000025920119,2.3478724e-7,0.000016373146,0.0000030646918,0.00031820955],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993591,0.000018770666,0.00030407705,0.00009516942,0.000121415025,0.00010147991],"domain_scores_gemma":[0.9995939,0.000013487257,0.00025180887,0.000045910045,0.000015769154,0.00007912373],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013297709,0.00007916385,0.00014183449,0.000010179772,0.000023920236,0.000009725513,0.00008258183,0.000076384684,0.0031897917],"category_scores_gemma":[0.000031429332,0.000054334992,0.00003923155,0.000119101656,0.00010157878,0.00008676596,0.000015064974,0.00007775917,0.000005399617],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009032856,0.000047705787,0.0059359423,0.000011703584,0.0000049489076,0.000005411967,0.00006810897,0.000016093925,0.98051554,2.942105e-7,0.000007642865,0.013296281],"study_design_scores_gemma":[0.00039886512,0.0001089464,0.04802422,0.000026416345,0.000006644932,0.000053988628,0.000022643271,0.000068503505,0.9487084,0.000020960457,0.0024698316,0.000090576934],"about_ca_topic_score_codex":0.0000028408874,"about_ca_topic_score_gemma":4.2553006e-7,"teacher_disagreement_score":0.042088274,"about_ca_system_score_codex":0.00002644573,"about_ca_system_score_gemma":0.00000638892,"threshold_uncertainty_score":0.99772143},"labels":[],"label_agreement":null},{"id":"W2103139074","doi":"10.1046/j.1462-2920.2000.00144.x","title":"Monitoring of <i>Desulfitobacterium frappieri</i> PCP‐1 in pentachlorophenol‐degrading anaerobic soil slurry reactors","year":2000,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Armand Frappier Museum; Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Pentachlorophenol; Biodegradation; Microorganism; Bioremediation; Soil water; Bioaugmentation; Environmental chemistry; Soil contamination; Bacteria; Microbiology; Bioreactor; Biology; Anaerobic exercise; Chemistry; Botany; Ecology","score_opus":0.005657336205446055,"score_gpt":0.18372470751428313,"score_spread":0.17806737130883707,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2103139074","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980218,0.00011203508,0.000001955756,0.000058523365,0.0003315508,0.00022813192,0.000093432,0.000027263815,0.0011253246],"genre_scores_gemma":[0.99807876,0.0004945153,0.00056284247,0.00014814058,0.000055726512,0.0000061464457,0.00008601485,0.000025910322,0.00054196926],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982074,0.00011122262,0.0005382747,0.0005325859,0.00010477842,0.0005057746],"domain_scores_gemma":[0.9993993,0.000035045385,0.00015455086,0.0003018711,0.0000010584043,0.00010817173],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00018643806,0.00028371898,0.00033240387,0.000066438406,0.00008246572,0.000011198727,0.00034331068,0.00020691758,0.013319225],"category_scores_gemma":[0.000006377928,0.00027514342,0.00010089126,0.00020260742,0.0004374871,0.00018079663,0.00014896171,0.00023291886,0.0013760172],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047108573,0.00014409998,0.29109317,0.0000029795426,0.0000076646975,0.0000065619374,0.00025009373,0.000064663705,0.70301294,4.0444047e-7,0.00014399733,0.0052263536],"study_design_scores_gemma":[0.0007909321,0.00012707898,0.4543469,0.00002621344,0.000009354929,0.000031244326,0.00022898999,0.000009510288,0.5301651,0.000008937448,0.013893909,0.00036182717],"about_ca_topic_score_codex":0.00025813584,"about_ca_topic_score_gemma":0.00005585708,"teacher_disagreement_score":0.17284782,"about_ca_system_score_codex":0.0003532955,"about_ca_system_score_gemma":0.0000069116836,"threshold_uncertainty_score":0.9999701},"labels":[],"label_agreement":null},{"id":"W2103183006","doi":"10.1128/aem.69.6.3085-3092.2003","title":"Characterization of Hydrocarbon-Degrading Microbial Populations in Contaminated and Pristine Alpine Soils","year":2003,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":451,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"","keywords":"AlkB; Pseudomonas putida; Rhodococcus; Acinetobacter; Biology; Bacteria; Soil contamination; Microbiology; Microorganism; Contamination; Environmental chemistry; Chemistry; Gene; Ecology; Biochemistry","score_opus":0.008118963309509576,"score_gpt":0.18461026786837625,"score_spread":0.1764913045588667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2103183006","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99905485,0.00002759751,0.00003804319,0.000040802348,0.000049239556,0.00023237332,0.00006268714,0.000008168804,0.00048622288],"genre_scores_gemma":[0.9989985,0.00010675431,0.00035043067,0.00014123936,0.0000059986414,0.000003988281,0.00032033696,0.0000091093425,0.00006359378],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991942,0.000034922483,0.00027428972,0.00027766588,0.000029400204,0.00018949616],"domain_scores_gemma":[0.9997502,0.000011427768,0.00010917449,0.00008013561,6.5171866e-7,0.000048442293],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011509142,0.00013859115,0.0001905264,0.000044672786,0.000050648025,0.0000057594075,0.00004724872,0.000111858826,0.00035819234],"category_scores_gemma":[0.0000045823717,0.00013252867,0.000015427784,0.00008265695,0.00028708886,0.000044925415,0.000065529566,0.00007580693,0.000021054084],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012266229,0.000060031318,0.1024308,0.000004583622,0.0000035779817,7.0078937e-7,0.00013825817,0.000002069841,0.8965724,0.00012941325,0.0000112843145,0.000634604],"study_design_scores_gemma":[0.0012150179,0.000056763754,0.45832977,0.000009495379,0.000013711204,0.00004200518,0.00008965311,0.00003880882,0.5377817,0.00008372861,0.0021023115,0.00023702865],"about_ca_topic_score_codex":0.0000425984,"about_ca_topic_score_gemma":0.00006468092,"teacher_disagreement_score":0.35879073,"about_ca_system_score_codex":0.000052550487,"about_ca_system_score_gemma":0.000002774112,"threshold_uncertainty_score":0.54043627},"labels":[],"label_agreement":null},{"id":"W2103536041","doi":"10.1111/1462-2920.12643","title":"Biodegradation of <scp>C</scp> <sub>7</sub> and <scp>C</scp> <sub>8</sub> <i>iso</i> ‐alkanes under methanogenic conditions","year":2014,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Helmholtz-Alberta Initiative; Genome Alberta; Genome Canada","keywords":"Biodegradation; Biology; Alkane; Methanogen; Archaea; Food science; Naphtha; Methane; Methanosaeta; Metabolism; Thermophile; Biochemistry; Environmental chemistry; Gene; Chemistry; Enzyme; Ecology; Catalysis","score_opus":0.006518295693296528,"score_gpt":0.18993508537062845,"score_spread":0.1834167896773319,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2103536041","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99692184,0.00032864825,0.0003018413,0.00012230771,0.00035285988,0.00051962794,0.00072226755,0.000070478854,0.00066012674],"genre_scores_gemma":[0.9962957,0.0008991123,0.0003034823,0.0010521354,0.00007792749,0.000020507903,0.0010873359,0.00005158756,0.00021219083],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970529,0.00038471623,0.00069804117,0.00092569424,0.00020513794,0.000733521],"domain_scores_gemma":[0.99822176,0.00057421514,0.00048079956,0.00045865367,0.000007756367,0.00025682917],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004508548,0.00051494833,0.0005278808,0.00014254394,0.00027169439,0.000034569035,0.00037799252,0.00046869993,0.00016480619],"category_scores_gemma":[0.00013835146,0.0004948013,0.00018768606,0.00024886857,0.0014636312,0.0002758013,0.00044297893,0.0003030796,0.0018342861],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000047086273,0.00023453882,0.012185967,0.00001499438,0.00006056975,0.000002090846,0.00026250066,0.000055986333,0.9790401,0.000044465192,0.006707877,0.00138622],"study_design_scores_gemma":[0.0008912209,0.00022902,0.04648814,0.000015090287,0.00008127582,0.00009164465,0.00037742688,0.000039973696,0.9371947,0.00022329262,0.014221699,0.00014653135],"about_ca_topic_score_codex":0.000025981291,"about_ca_topic_score_gemma":0.000100980586,"teacher_disagreement_score":0.041845396,"about_ca_system_score_codex":0.00022256126,"about_ca_system_score_gemma":0.000016644455,"threshold_uncertainty_score":0.9997504},"labels":[],"label_agreement":null},{"id":"W2104069974","doi":"10.1002/jssc.200600243","title":"Analysis of soil organic matter biomarkers by sequential chemical degradation and gas chromatography – mass spectrometry","year":2007,"lang":"en","type":"article","venue":"Journal of Separation Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":130,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Chemistry; Lignin; Cutin; Chromatography; Extraction (chemistry); Mass spectrometry; Wax; Hydrolysis; Phenols; Gas chromatography–mass spectrometry; Gas chromatography; Fraction (chemistry); Suberin; Organic chemistry; Biochemistry","score_opus":0.007371546127956974,"score_gpt":0.25654224220728883,"score_spread":0.24917069607933184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2104069974","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9872677,0.000022216735,0.0119815655,0.00018432947,0.00008163652,0.00004086858,0.000005688231,0.0000030087522,0.0004130293],"genre_scores_gemma":[0.997544,0.000031976015,0.0022737582,0.00010689829,0.000014266765,6.417081e-8,0.0000040969517,0.0000024788342,0.000022487326],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985814,0.00002046244,0.0004466976,0.00016180941,0.0006287883,0.00016083341],"domain_scores_gemma":[0.99922854,0.000027768758,0.0004703601,0.000088603396,0.000057355683,0.00012736536],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013466646,0.00007565111,0.00015722807,0.00042334068,0.00006539155,0.000052549443,0.0001927344,0.00004363894,0.0014003494],"category_scores_gemma":[0.000039638355,0.00006127505,0.00007205322,0.0028414563,0.00045665845,0.0005288402,0.000035188274,0.000063451545,0.000019256133],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019933635,0.000024608458,0.1165882,0.0000012932203,0.00003503377,8.236113e-7,0.00009058235,0.000011841656,0.88221955,0.0000015412273,0.0007700053,0.00023660457],"study_design_scores_gemma":[0.00017276057,0.000039645784,0.1932984,0.0000033984363,0.00008705092,0.000014782535,0.00006824432,0.0005575758,0.8056066,0.000018540346,0.00006199685,0.000070982365],"about_ca_topic_score_codex":0.000021315731,"about_ca_topic_score_gemma":0.000026119797,"teacher_disagreement_score":0.076710194,"about_ca_system_score_codex":0.00011046518,"about_ca_system_score_gemma":0.000028955374,"threshold_uncertainty_score":0.9995125},"labels":[],"label_agreement":null},{"id":"W2104801869","doi":"10.1186/1471-2164-13-200","title":"Genomic determinants of organohalide-respiration in Geobacter lovleyi, an unusual member of the Geobacteraceae","year":2012,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Strategic Environmental Research and Development Program; Office of Science; Ontario Genomics Institute; Government of Canada; Genome Canada; Ontario Genomics; Joint Genome Institute; U.S. Department of Energy","keywords":"Geobacter; Biology; Genome; GC-content; Strain (injury); Genetics; Gene; Plasmid; Microbiology; Bacteria","score_opus":0.02569676059512762,"score_gpt":0.2478827420412379,"score_spread":0.22218598144611026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2104801869","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99920267,0.0000126175,0.000010650443,0.0000155613,0.00022874863,0.00022811191,0.000032359847,0.000004586568,0.00026472154],"genre_scores_gemma":[0.9991408,0.000008535467,0.000578554,0.000100545956,0.000048271173,0.0000013184964,0.0000066698753,0.0000125378,0.000102771366],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989347,0.000101539415,0.0004214262,0.00015765394,0.00014200185,0.00024270706],"domain_scores_gemma":[0.99933004,0.00002344885,0.00026409194,0.00030332003,0.000010647837,0.00006844664],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00036570747,0.00011578496,0.00016156801,0.00003206026,0.000030944637,0.000009014545,0.0002671151,0.00009126421,0.0009161185],"category_scores_gemma":[0.000029957775,0.000086820255,0.000053457923,0.00015678184,0.00010739185,0.0002221766,0.00017115191,0.000067456225,0.00013344976],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014277083,0.00006161257,0.5461775,0.000004917988,0.000001046133,6.036753e-8,0.00048572064,0.00009183969,0.45264423,0.0000026145872,0.000027666429,0.00048848224],"study_design_scores_gemma":[0.00019328464,0.00001680923,0.6835011,0.0000040097866,0.000006070645,0.0000019027909,0.000044910234,0.00012335829,0.3153613,0.000010099674,0.00065906695,0.00007809146],"about_ca_topic_score_codex":0.00033924892,"about_ca_topic_score_gemma":0.003805143,"teacher_disagreement_score":0.13732357,"about_ca_system_score_codex":0.00015280304,"about_ca_system_score_gemma":0.00003805809,"threshold_uncertainty_score":0.9999972},"labels":[],"label_agreement":null},{"id":"W2105086858","doi":"10.1038/ncomms3156","title":"Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica","year":2013,"lang":"en","type":"article","venue":"Nature Communications","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":146,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Max-Planck-Gesellschaft; Deutsche Forschungsgemeinschaft; National Institutes of Health; Government of Canada; Genome Canada; Ontario Genomics; National Institute of General Medical Sciences; Ontario Genomics Institute","keywords":"Bacteria; Genome; Context (archaeology); Biology; Whole genome sequencing; Mesophile; Biogenesis; Gene; Computational biology; Genetics","score_opus":0.020016689205983783,"score_gpt":0.23784497990742362,"score_spread":0.21782829070143983,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105086858","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938209,0.0002058999,0.000006569574,0.003297344,0.00007380217,0.00008790696,0.000067127796,0.000012270642,0.0024281754],"genre_scores_gemma":[0.9976925,0.00027240303,0.0010540653,0.00061467336,0.0000076054857,0.0000057477105,0.000063698215,0.000004129113,0.00028515668],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993879,0.00007467806,0.0001691374,0.00013730621,0.00012712399,0.000103813196],"domain_scores_gemma":[0.99898106,0.0000747449,0.00011043351,0.00075951655,0.000026722306,0.00004753838],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012088733,0.000074039206,0.00010307793,0.00004779336,0.00020524916,0.00002693111,0.00052042486,0.00009627099,0.0012155789],"category_scores_gemma":[0.000041747877,0.000052203333,0.00006704044,0.00063173764,0.00033210922,0.000117720694,0.00046140628,0.00027376396,0.00007109456],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000011445611,0.000024455705,0.1804255,0.000001385439,0.000051849445,1.9498508e-8,0.0001049703,0.000023137101,0.8184856,0.00012454418,0.0002634197,0.0004939819],"study_design_scores_gemma":[0.00005611186,0.0000039064316,0.98727304,0.0000022849115,0.00009109029,0.0000013490144,0.000023763918,0.0008036743,0.0008660474,0.000022229691,0.010791254,0.00006526878],"about_ca_topic_score_codex":0.00019798774,"about_ca_topic_score_gemma":0.00065517216,"teacher_disagreement_score":0.81761956,"about_ca_system_score_codex":0.000080605445,"about_ca_system_score_gemma":0.000011488385,"threshold_uncertainty_score":0.99969745},"labels":[],"label_agreement":null},{"id":"W2106760880","doi":"10.1128/aem.67.11.5107-5112.2001","title":"Effects of Low Temperature and Freeze-Thaw Cycles on Hydrocarbon Biodegradation in Arctic Tundra Soil","year":2001,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":152,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biodegradation; Microcosm; Hydrocarbon; Tundra; Mineralization (soil science); Environmental chemistry; Incubation; Carbon dioxide; Total petroleum hydrocarbon; Ribosomal Intergenic Spacer analysis; Chemistry; Heterotroph; Soil contamination; Ecology; Contamination; Bacteria; Biology; Arctic; Ribosomal RNA; Organic chemistry; Biochemistry; Nitrogen","score_opus":0.002040304341653063,"score_gpt":0.15563452831626454,"score_spread":0.15359422397461148,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106760880","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99916446,0.000107104985,0.0000012243894,0.000089951354,0.000044113753,0.00023614411,0.000026885187,0.000008764881,0.0003213596],"genre_scores_gemma":[0.998686,0.0006949984,0.000048012364,0.0004047338,0.000012751977,0.0000059276676,0.0000907291,0.000008947501,0.00004787801],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992087,0.00003438743,0.00017928203,0.0003305413,0.000045916666,0.00020118649],"domain_scores_gemma":[0.9997343,0.000048606507,0.00006820154,0.000095369585,3.8059892e-7,0.000053149895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006781893,0.00016353437,0.00018123731,0.00004325414,0.000046234825,0.0000075290927,0.00006972819,0.00015577163,0.00016041855],"category_scores_gemma":[0.0000037695534,0.00013938069,0.000019342124,0.00006987859,0.0003654736,0.00004010372,0.00009599781,0.00011612699,0.000055180197],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047600963,0.000121717974,0.08370421,0.000018225854,0.000005286237,0.0000035769344,0.00011176564,0.000014211414,0.9143105,0.000015193842,0.0000516246,0.0015960534],"study_design_scores_gemma":[0.0009246578,0.000113372014,0.4159706,0.00002117044,0.000008378599,0.00002362981,0.00009716526,0.00000987409,0.58223623,0.00008755319,0.0003318384,0.00017555112],"about_ca_topic_score_codex":0.00017654426,"about_ca_topic_score_gemma":0.00016913323,"teacher_disagreement_score":0.3322664,"about_ca_system_score_codex":0.000054820404,"about_ca_system_score_gemma":0.0000018600447,"threshold_uncertainty_score":0.5683779},"labels":[],"label_agreement":null},{"id":"W2106923425","doi":"10.1680/jees.2013.0043","title":"Management of hydrocarbon-contaminated soil through bioremediation and landfill disposal at a remote location in Northern Canada","year":2013,"lang":"en","type":"article","venue":"Journal of Environmental Engineering and Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Royal Military College of Canada","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Environmental science; Bioremediation; Leachate; Soil contamination; Microcosm; Waste management; Contamination; Environmental engineering; Soil Pollutants; Petroleum; Biodegradation; Biostimulation; Total petroleum hydrocarbon; Bioaugmentation; Environmental chemistry; Soil water; Soil science; Geology; Chemistry; Ecology","score_opus":0.002186077348249999,"score_gpt":0.15107520790390364,"score_spread":0.14888913055565364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106923425","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99952835,0.000083414176,0.00006759013,0.000079570396,0.000071004506,0.000077593446,0.000002301505,0.0000017111089,0.00008848218],"genre_scores_gemma":[0.9991844,0.00020337201,0.0005523674,0.00001812619,0.0000062382755,3.3367016e-7,9.473122e-7,0.0000034479606,0.000030726198],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99921656,0.0000072721905,0.00023061594,0.000117751595,0.00029713442,0.00013069737],"domain_scores_gemma":[0.99973065,0.000011575905,0.00012301675,0.000056947654,0.0000039951447,0.00007384208],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018441655,0.000075297554,0.00009581521,0.00003717976,0.000033611832,0.00001089615,0.00009275983,0.000021598575,0.000044051558],"category_scores_gemma":[0.0000100991565,0.00006186136,0.000009715326,0.00015920709,0.0001346277,0.00024954294,0.000083809886,0.00005529334,0.0000027115766],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012899333,0.000036571902,0.18710405,0.00002417228,0.000007505123,0.000013063398,0.00040366082,0.0072210715,0.7967522,0.000003137432,0.000026206195,0.008395477],"study_design_scores_gemma":[0.0003616648,0.00005545486,0.96440464,0.0000411866,0.000006011996,0.000020757407,0.00013041623,0.015809767,0.018983196,0.000007495991,0.00008973057,0.00008966921],"about_ca_topic_score_codex":0.009380582,"about_ca_topic_score_gemma":0.011117108,"teacher_disagreement_score":0.77776897,"about_ca_system_score_codex":0.0003250222,"about_ca_system_score_gemma":0.0000132319765,"threshold_uncertainty_score":0.99721605},"labels":[],"label_agreement":null},{"id":"W2107118546","doi":"10.1128/aem.70.3.1487-1493.2004","title":"Use of a Novel Fluorinated Organosulfur Compound To Isolate Bacteria Capable of Carbon-Sulfur Bond Cleavage","year":2004,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"North China University of Technology; Institut de Recherche pour le Développement","keywords":"Dibenzothiophene; Organosulfur compounds; Sulfur; Chemistry; Sulfone; Rhodococcus; Alkyl; Organic chemistry; Sulfoxide; Sulfide; Enzyme","score_opus":0.010657847524623162,"score_gpt":0.1805500417104014,"score_spread":0.16989219418577822,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107118546","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99874556,0.000013851413,0.000025162262,0.00006572501,0.000077849865,0.00032674542,0.0003189121,0.000013374361,0.0004128101],"genre_scores_gemma":[0.9965427,0.00004074937,0.0029016095,0.0003068558,0.000009969471,0.0000035018397,0.0001057743,0.00001787153,0.00007096532],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998874,0.000014076442,0.00037008227,0.00038284413,0.000062023246,0.00029699225],"domain_scores_gemma":[0.99949855,0.00002349761,0.00015477871,0.0002083975,0.0000019129411,0.00011286709],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000080168684,0.0002100975,0.00031406328,0.0000450424,0.000048050886,0.000008485358,0.00014972818,0.00014909344,0.0002746182],"category_scores_gemma":[0.0000048457023,0.0001930933,0.000037230548,0.00012748741,0.0004380459,0.000056004315,0.00029676978,0.000090221445,0.00007836371],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000791986,0.00025251278,0.0058070337,0.000009318744,0.000022243952,0.0000015922458,0.00032982376,0.00006703494,0.9931103,0.000035442747,0.00015070089,0.00013482623],"study_design_scores_gemma":[0.0010716579,0.00016112081,0.03899867,0.000009335513,0.00001963681,0.000031195745,0.00009994832,0.0000036710478,0.9561228,0.000011696164,0.0032495747,0.00022067071],"about_ca_topic_score_codex":0.00048583117,"about_ca_topic_score_gemma":0.00006943679,"teacher_disagreement_score":0.03698745,"about_ca_system_score_codex":0.000114473645,"about_ca_system_score_gemma":0.000008332326,"threshold_uncertainty_score":0.7874117},"labels":[],"label_agreement":null},{"id":"W2107191330","doi":"10.1002/bit.22353","title":"Ultrasonically enhanced delivery and degradation of PAHs in a polymer–liquid partitioning system by a microbial consortium","year":2009,"lang":"en","type":"article","venue":"Biotechnology and Bioengineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Degradation (telecommunications); Chemistry; Biodegradation; Environmental chemistry; Microbial consortium; Microbial biodegradation; Polymer; Chromatography; Microorganism; Organic chemistry; Bacteria; Biology; Computer science","score_opus":0.00317717636754744,"score_gpt":0.17210571759381166,"score_spread":0.16892854122626422,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107191330","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99791044,0.00039223378,0.0010587398,0.00041211164,0.000030384592,0.000086341286,0.00001364863,0.000057440167,0.000038657105],"genre_scores_gemma":[0.9991533,0.00021125843,0.00056190393,0.000047887184,0.0000039317065,0.0000011508736,0.000007538149,0.0000028777176,0.000010133199],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994287,0.000013054639,0.00019113735,0.00017594808,0.00004357019,0.0001475768],"domain_scores_gemma":[0.99981594,0.00001454773,0.00007056775,0.00006495836,0.000003135315,0.00003084238],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000102651364,0.000086207416,0.00012204536,0.00005272925,0.000028815997,0.0000068039813,0.000054469125,0.00018772377,0.000019836685],"category_scores_gemma":[0.0000194444,0.00008167831,0.000012322899,0.00015125473,0.00011794585,0.00006016427,0.000028053,0.00008560764,0.0000033584954],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026004816,0.000017394557,0.0011197084,0.000009677717,0.000003148012,0.0000011738574,0.000023726338,0.0000061296164,0.9947655,0.00011719651,0.00002227383,0.0038880457],"study_design_scores_gemma":[0.0002722538,0.00011891841,0.005744146,0.00004196798,0.00000532575,0.0000130054705,0.000046312547,0.00034317738,0.9932502,0.0000015415013,0.000067247376,0.0000958987],"about_ca_topic_score_codex":0.000046330864,"about_ca_topic_score_gemma":0.00003503707,"teacher_disagreement_score":0.004624438,"about_ca_system_score_codex":0.000032850978,"about_ca_system_score_gemma":0.0000040133414,"threshold_uncertainty_score":0.33307448},"labels":[],"label_agreement":null},{"id":"W2107282469","doi":"10.1128/aem.70.9.5538-5545.2004","title":"Characterization of a Highly Enriched <i>Dehalococcoides</i> -Containing Culture That Grows on Vinyl Chloride and Trichloroethene","year":2004,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":230,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Centers for Disease Control and Prevention","keywords":"Dehalococcoides; 16S ribosomal RNA; Enrichment culture; Vinyl chloride; Methanogenesis; Strain (injury); Microbiology; Reductive dechlorination; Chemistry; Biology; Ribosomal RNA; Temperature gradient gel electrophoresis; Bacteria; Gene; Biochemistry; Genetics; Organic chemistry; Biodegradation","score_opus":0.0052763462985922945,"score_gpt":0.16772900226956947,"score_spread":0.16245265597097716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107282469","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988244,0.000030601364,0.000057633726,0.00014504607,0.00005864379,0.00029462588,0.00009817191,0.00001998007,0.00047089014],"genre_scores_gemma":[0.997997,0.0004729548,0.00015932217,0.0009536326,0.000025910671,0.000009354641,0.000300841,0.000013950802,0.00006706128],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99906135,0.000020651976,0.00022391729,0.00039463837,0.00006335519,0.00023611903],"domain_scores_gemma":[0.999619,0.00001808765,0.00015447206,0.00012553784,9.159866e-7,0.00008196904],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010464452,0.00021069129,0.00023624957,0.000033513123,0.00009596943,0.000011478361,0.00009797048,0.00016684634,0.00015948594],"category_scores_gemma":[0.000002974121,0.00017297667,0.00003129336,0.000068120964,0.0003528346,0.00007084277,0.00013783475,0.000116809504,0.0000681109],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012752424,0.00009120136,0.005382092,0.0000057718066,0.0000122325355,0.0000016502476,0.0006556229,0.00000738311,0.99198496,0.00013909576,0.00001577277,0.0015767027],"study_design_scores_gemma":[0.0014713759,0.00023978531,0.05207609,0.000007892541,0.000019435482,0.000028689368,0.00024151984,0.0000018829636,0.94167507,0.00012743738,0.0038739191,0.0002368792],"about_ca_topic_score_codex":0.000035481895,"about_ca_topic_score_gemma":0.000011261095,"teacher_disagreement_score":0.05030986,"about_ca_system_score_codex":0.00009044392,"about_ca_system_score_gemma":0.000003537047,"threshold_uncertainty_score":0.70537835},"labels":[],"label_agreement":null},{"id":"W2107932219","doi":"10.1139/w99-129","title":"Molecular analysis and development of 16S rRNA oligonucleotide probes to characterize a diclofop-methyl-degrading biofilm consortium","year":2000,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"National Research Council Canada; McGill University","funders":"","keywords":"Biology; Bacteria; Oligonucleotide; Biofilm; Gene; 16S ribosomal RNA; Catabolism; genomic DNA; Microbiology; DNA; Ribosomal RNA; Molecular biology; Biochemistry; Genetics; Enzyme","score_opus":0.009055876617040196,"score_gpt":0.1985475235249704,"score_spread":0.18949164690793022,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107932219","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99899656,0.00008103462,0.00006919139,0.00041810307,0.000071245566,0.00010267054,0.00006571372,0.0000027577146,0.00019271951],"genre_scores_gemma":[0.9943019,0.000026145557,0.0049037253,0.0006554378,0.000012412909,6.009739e-7,0.00001277654,0.0000073779283,0.00007961778],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988533,0.00007629325,0.00051831274,0.00018462662,0.000052206982,0.00031525551],"domain_scores_gemma":[0.9991624,0.000018171202,0.00021279218,0.000104974,0.000029550087,0.00047215153],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00032635964,0.00013417949,0.00033188748,0.0002780447,0.00007919348,0.000018873596,0.0002249304,0.00009071414,0.003917703],"category_scores_gemma":[0.000035262823,0.00011516659,0.00007904767,0.0004114774,0.00021319515,0.00005818038,0.00002425745,0.0001072618,0.00008598452],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017652223,0.00001142053,0.04488492,0.0000035427386,0.000117650576,0.000025608078,0.0006343553,0.000026435067,0.94199866,0.0000015662822,0.00027463696,0.0120035345],"study_design_scores_gemma":[0.0004138312,0.00010999007,0.26424503,0.000027796776,0.00010887022,0.00015205407,0.00009250637,0.000005407159,0.6772818,0.000004468073,0.057308584,0.00024963883],"about_ca_topic_score_codex":0.0014996435,"about_ca_topic_score_gemma":0.012851121,"teacher_disagreement_score":0.26471686,"about_ca_system_score_codex":0.00013383818,"about_ca_system_score_gemma":0.00018796093,"threshold_uncertainty_score":0.9969928},"labels":[],"label_agreement":null},{"id":"W2108886492","doi":"10.1002/cjce.20014","title":"Modélisation de la cinétique de biodégradation de phénol par granules aérobies","year":2008,"lang":"fr","type":"article","venue":"The Canadian Journal of Chemical Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Gradation; Chemistry; Art","score_opus":0.007495460187330852,"score_gpt":0.18173909583521178,"score_spread":0.17424363564788092,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108886492","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929142,0.0006179101,0.0028829144,0.0031924243,0.00018329293,0.00005368414,0.000020519132,0.000007485433,0.00012759813],"genre_scores_gemma":[0.99710804,0.00016415917,0.0021754315,0.0002464464,0.00022818407,6.1629936e-7,0.0000027592364,0.000013461577,0.000060883733],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99908715,0.000079220474,0.00024849176,0.000075464275,0.00013389598,0.00037576476],"domain_scores_gemma":[0.99920976,0.00010174952,0.00010958326,0.00008144566,0.000020955535,0.00047651347],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006299215,0.00012073605,0.00012226697,0.0000614963,0.000112476235,0.000049005615,0.00023625631,0.00017894128,0.0003131999],"category_scores_gemma":[0.0002547475,0.00010540052,0.00007847753,0.00015351568,0.00030664122,0.00015221903,0.000011177468,0.00038354515,0.0000219233],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000065609365,0.000011465674,0.0054237167,0.000016347747,0.000019024323,0.00005779263,0.0018092359,0.041638356,0.94767064,0.00016665831,0.0023393012,0.0008408811],"study_design_scores_gemma":[0.000311512,0.000023686096,0.018193759,0.00011413095,0.0000374917,0.001476186,0.00003200574,0.030953335,0.9414929,0.00030186493,0.006860854,0.00020224965],"about_ca_topic_score_codex":0.0063717067,"about_ca_topic_score_gemma":0.00082702894,"teacher_disagreement_score":0.012770042,"about_ca_system_score_codex":0.0011033466,"about_ca_system_score_gemma":0.00046427798,"threshold_uncertainty_score":0.9632157},"labels":[],"label_agreement":null},{"id":"W2109497654","doi":"10.1006/eesa.2001.2108","title":"Measurement of Short- and Long-Term Toxicity of Polycyclic Aromatic Hydrocarbons Using Luminescent Bacteria","year":2002,"lang":"en","type":"article","venue":"Ecotoxicology and Environmental Safety","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":99,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Luminescent bacteria; Toxicity; Bioassay; Environmental chemistry; Chemistry; Photobacterium phosphoreum; Acute toxicity; Carcinogen; Environmental toxicology; Singlet oxygen; Oxygen; Biology; Biochemistry; Organic chemistry; Ecology","score_opus":0.019286250077032913,"score_gpt":0.20944293659581306,"score_spread":0.19015668651878015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109497654","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99909955,0.0002764591,0.000028922022,0.00006461253,0.00007301089,0.00024516357,0.000018359076,0.000006718646,0.00018720915],"genre_scores_gemma":[0.9992294,0.00046959956,0.00015087842,0.000099088684,0.000010908613,0.0000018532385,0.000006472445,0.000008295003,0.000023503531],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99889183,0.00007200175,0.00037771292,0.00025818805,0.00019337192,0.00020688461],"domain_scores_gemma":[0.99959135,0.000016001663,0.00013502278,0.00014507912,3.2670513e-7,0.00011224092],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00019088619,0.00015805538,0.0002518562,0.000029387596,0.00008029035,0.0000039468514,0.00008713228,0.00012014113,0.0014681101],"category_scores_gemma":[0.000009416789,0.00014530485,0.000051415383,0.00005372702,0.0005334905,0.00008635359,0.00015222652,0.00007319977,0.000015285616],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023208484,0.000206671,0.3283958,0.000008812209,0.000019088551,0.0000016578965,0.00009368467,0.000001836266,0.66956013,3.3483744e-7,0.0000106066445,0.0016781344],"study_design_scores_gemma":[0.0003986399,0.00013443119,0.8386804,0.000021036874,0.000040236053,0.000025133786,0.000022694345,0.0004309144,0.16004507,0.0000061001306,0.000055714998,0.00013960591],"about_ca_topic_score_codex":0.000010326489,"about_ca_topic_score_gemma":0.00008145268,"teacher_disagreement_score":0.5102846,"about_ca_system_score_codex":0.00013858647,"about_ca_system_score_gemma":0.0000022574602,"threshold_uncertainty_score":0.99944466},"labels":[],"label_agreement":null},{"id":"W2110374961","doi":"10.1016/j.scitotenv.2010.04.036","title":"Potential for phytoextraction of PCBs from contaminated soils using weeds","year":2010,"lang":"en","type":"article","venue":"The Science of The Total Environment","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":55,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University; Royal Military College of Canada","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Phytoremediation; Bioaccumulation; Biology; Weed; Shoot; Botany; Bioconcentration; Soil contamination; Dry weight; Soil water; Agronomy; Ecology","score_opus":0.008587087399587443,"score_gpt":0.21188416627422155,"score_spread":0.2032970788746341,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2110374961","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983241,0.000004195813,0.00024619218,0.00029600228,0.0005435642,0.0003179006,0.00004692772,0.000004178466,0.00021696111],"genre_scores_gemma":[0.99843156,0.000003686855,0.0012795758,0.000016157255,0.0000334963,0.0000019556542,0.0000015049696,0.000004899918,0.00022715531],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989027,0.000026333459,0.00021729662,0.00020393275,0.00045984527,0.00018989597],"domain_scores_gemma":[0.999303,0.00003056869,0.0002561118,0.00035781375,0.0000064916253,0.000046012534],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00055431214,0.00009025442,0.000101401056,0.000016537513,0.00021866284,0.000013589419,0.00051790033,0.000044378052,0.0010200005],"category_scores_gemma":[0.000040220773,0.000051458916,0.00008203278,0.0001486542,0.0016378262,0.00015891761,0.00025742257,0.00010113022,0.00003326334],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019782461,0.000056024495,0.00014702132,0.0000011873528,0.0000040318955,4.3089116e-8,0.00012854829,0.0067843255,0.9915801,0.000013630181,0.000029102357,0.0012361654],"study_design_scores_gemma":[0.00022736171,0.00003508463,0.102808826,0.0000046494515,0.00002676926,0.0000026690113,0.00007508904,0.015037246,0.8814369,0.00018888855,0.00008331414,0.00007324781],"about_ca_topic_score_codex":0.00039290942,"about_ca_topic_score_gemma":0.000009487719,"teacher_disagreement_score":0.11014328,"about_ca_system_score_codex":0.00007491047,"about_ca_system_score_gemma":0.0000194741,"threshold_uncertainty_score":0.9998932},"labels":[],"label_agreement":null},{"id":"W2111327072","doi":"10.1128/aem.00390-11","title":"Quantitative Analysis of the Relative Transcript Levels of Four Chlorophenol Reductive Dehalogenase Genes in Desulfitobacterium hafniense PCP-1 Exposed to Chlorophenols","year":2011,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Pentachlorophenol; Dehalogenase; Chlorophenol; Chemistry; Downregulation and upregulation; Biology; Gene; Biochemistry; Molecular biology; Phenol; Environmental chemistry; Organic chemistry","score_opus":0.03339420898834772,"score_gpt":0.20246479016086863,"score_spread":0.1690705811725209,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111327072","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981688,0.000046649944,0.00015440749,0.000032881704,0.00006992859,0.00047812058,0.000654473,0.000005167329,0.0003895275],"genre_scores_gemma":[0.9979024,0.000040534393,0.0018234043,0.00014114338,0.0000042681067,0.0000125753195,0.00003065564,0.0000115728435,0.000033478776],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99866635,0.000102736594,0.00045210912,0.00043463713,0.00007556443,0.00026859617],"domain_scores_gemma":[0.9994072,0.000045911074,0.00022466564,0.00024540845,0.0000036619276,0.00007319855],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017201627,0.00021237778,0.00041412553,0.00011387893,0.000058171678,0.0000027306778,0.0002393317,0.00013313211,0.00090824097],"category_scores_gemma":[0.00001017873,0.00015737354,0.00011227287,0.00046106713,0.00080197974,0.000067868285,0.00018970888,0.000105343315,0.000035277655],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024248552,0.00016315663,0.021787494,0.0000038335315,0.00015709604,0.0000014764775,0.006577186,0.0000517156,0.9701139,0.00010675343,0.000007895574,0.000787058],"study_design_scores_gemma":[0.00038722836,0.00013677831,0.361437,0.000004989049,0.00010188806,0.0000030476983,0.0009571402,0.000008493922,0.6366752,0.000098331875,0.000045993555,0.00014393269],"about_ca_topic_score_codex":0.00016944972,"about_ca_topic_score_gemma":0.00029436284,"teacher_disagreement_score":0.3396495,"about_ca_system_score_codex":0.00011158985,"about_ca_system_score_gemma":0.000007866334,"threshold_uncertainty_score":0.99446017},"labels":[],"label_agreement":null},{"id":"W2111374315","doi":"10.1002/1097-0290(20001105)70:3<291::aid-bit6>3.0.co;2-y","title":"Effect of temperature on the inhibition kinetics of phenol biodegradation byPseudomonas putida Q5","year":2000,"lang":"en","type":"article","venue":"Biotechnology and Bioengineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Pseudomonas putida; Arrhenius equation; Biodegradation; Kinetics; Phenol; Chemistry; Substrate (aquarium); Yield (engineering); Thermodynamics; Bacteria; Pseudomonadaceae; Pseudomonadales; Pseudomonas; Organic chemistry; Biology; Enzyme; Physics; Ecology; Activation energy","score_opus":0.0031575463415373715,"score_gpt":0.17638065510050643,"score_spread":0.17322310875896907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111374315","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987753,0.000047805104,0.00001744338,0.0007749301,0.000033681186,0.00013829762,0.000014120515,0.000033433244,0.00016499081],"genre_scores_gemma":[0.9996674,0.00014539025,0.00010583258,0.000033768913,0.00000737735,0.0000015350194,0.000006508104,0.0000039712177,0.000028225917],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995638,0.00002021945,0.00013130216,0.00011789798,0.000074454125,0.000092311675],"domain_scores_gemma":[0.9997772,0.00003384322,0.000054011954,0.000117336895,0.0000028542927,0.000014776338],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000114792565,0.00008799459,0.00009930509,0.000037758487,0.000025234836,0.0000037324724,0.00006286166,0.00019306036,0.00033193376],"category_scores_gemma":[0.000024125395,0.00005453867,0.000022630174,0.00020744093,0.00017721573,0.000024955843,0.000025298978,0.00010380049,0.000020628211],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002348602,0.000017426315,0.00045153982,0.000013016573,0.0000052456803,4.2902775e-7,0.000017139044,0.00006520744,0.98517585,0.000111840476,0.00007258927,0.014046245],"study_design_scores_gemma":[0.00015904676,0.00031933901,0.0037982136,0.000022678447,0.0000078121875,0.000003770652,0.0000057509737,0.00022792222,0.99489915,0.0000072676744,0.00049191195,0.000057104735],"about_ca_topic_score_codex":0.00001024223,"about_ca_topic_score_gemma":0.0000033910633,"teacher_disagreement_score":0.013989141,"about_ca_system_score_codex":0.000013199018,"about_ca_system_score_gemma":9.2176543e-7,"threshold_uncertainty_score":0.36344418},"labels":[],"label_agreement":null},{"id":"W2111470663","doi":"10.1128/aem.66.12.5282-5289.2000","title":"Composition of Soil Microbial Communities Enriched on a Mixture of Aromatic Hydrocarbons","year":2000,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":111,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nova Chemicals (Canada); University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Benzene; Naphthalene; Rhodococcus; Toluene; Environmental chemistry; Bioremediation; Chemistry; Biodegradation; Styrene; Microbial biodegradation; Bacteria; Microorganism; Organic chemistry; Biology","score_opus":0.004265413245671724,"score_gpt":0.16716536157691617,"score_spread":0.16289994833124444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111470663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99622065,0.00002860321,0.0000037351222,0.000052521093,0.000026962629,0.00017536539,0.00011110087,0.000010535583,0.0033705002],"genre_scores_gemma":[0.99888444,0.00015376144,0.00017842701,0.00037571328,0.0000094628795,0.0000033037422,0.0002995378,0.000009623148,0.00008570738],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992653,0.000055222117,0.0002817493,0.00017084052,0.000051697232,0.00017517862],"domain_scores_gemma":[0.99962795,0.000042439195,0.00011495189,0.00017067563,2.809229e-7,0.00004368382],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000074814445,0.00016019102,0.00024643357,0.000029675022,0.000065221044,0.000003467756,0.00013684275,0.00013244044,0.0019442808],"category_scores_gemma":[5.3819406e-7,0.00014096957,0.00004684412,0.000054657365,0.00069565687,0.000024702156,0.00007067639,0.00010495654,0.00016679506],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008319651,0.0002294388,0.0023941253,0.000007315509,0.000017478988,4.1707875e-7,0.0006341349,0.00004480983,0.9941271,0.000016181413,0.00026064657,0.0021851833],"study_design_scores_gemma":[0.0017054052,0.00039042195,0.038609877,0.000027210557,0.00005101693,0.00005084139,0.00060197216,0.00006162644,0.955391,0.00028032693,0.0024430251,0.0003872935],"about_ca_topic_score_codex":0.00011064321,"about_ca_topic_score_gemma":0.000033623815,"teacher_disagreement_score":0.03873609,"about_ca_system_score_codex":0.00003910565,"about_ca_system_score_gemma":0.0000025776635,"threshold_uncertainty_score":0.99896806},"labels":[],"label_agreement":null},{"id":"W2111702685","doi":"10.7202/705122ar","title":"Biodégradation anaérobie de l'acide crotonique par une biomasse bactérienne spécialisée dans la dégradation de l'acide butyrique","year":2005,"lang":"fr","type":"article","venue":"Revue des sciences de l eau","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Gradation; Humanities; Chemistry; Molecular biology; Art; Biology","score_opus":0.038071406036892325,"score_gpt":0.29261659467488865,"score_spread":0.25454518863799636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111702685","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9446285,0.00047639952,0.034170065,0.011580092,0.00033944388,0.00059686723,0.0001680328,0.000113180686,0.007927457],"genre_scores_gemma":[0.9103506,0.0017266864,0.08453856,0.0009633953,0.0003796096,0.000021459839,0.000049076785,0.000029669736,0.0019409495],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.995986,0.00075480633,0.00067735545,0.00084331486,0.00042856563,0.0013100002],"domain_scores_gemma":[0.99834347,0.00020802523,0.00042462614,0.0003992823,0.000052150863,0.0005724615],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0031915603,0.00041749855,0.000328324,0.00019752773,0.0009788047,0.0004252309,0.00085089804,0.00046690225,0.001232159],"category_scores_gemma":[0.00042882236,0.00043313406,0.00018005614,0.0018148961,0.0038376767,0.0013842945,0.00016830135,0.00029059945,0.00057522656],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024381556,0.00023015664,0.05441067,0.00007847553,0.000014937203,0.0000502706,0.0045398776,0.00427846,0.9174602,0.0032267272,0.002097981,0.013587848],"study_design_scores_gemma":[0.0005520168,0.00028697093,0.09967382,0.00030879458,0.00007468986,0.00071883807,0.0007830274,0.039565537,0.79510546,0.005202106,0.05685992,0.00086883793],"about_ca_topic_score_codex":0.012607202,"about_ca_topic_score_gemma":0.053593032,"teacher_disagreement_score":0.122354776,"about_ca_system_score_codex":0.0028422584,"about_ca_system_score_gemma":0.000532819,"threshold_uncertainty_score":0.99981207},"labels":[],"label_agreement":null},{"id":"W2112586605","doi":"10.1007/s00203-004-0755-4","title":"Protocatechuate 4,5-dioxygenase from Comamonas testosteroni T-2: biochemical and molecular properties of a new subgroup within class III of extradiol dioxygenases","year":2005,"lang":"en","type":"article","venue":"Archives of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Universität Konstanz; Bundesministerium für Bildung und Forschung; Deutsche Forschungsgemeinschaft","keywords":"Dioxygenase; Comamonas testosteroni; Enzyme; Stereochemistry; Biology; Biochemistry; Chemistry","score_opus":0.01158384024779811,"score_gpt":0.1982210320558859,"score_spread":0.1866371918080878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112586605","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99820143,0.00059918367,0.0001025548,0.00020790192,0.000019956502,0.0006399912,0.000112822476,0.000012692879,0.00010346634],"genre_scores_gemma":[0.9940773,0.0000613645,0.005618231,0.00011046163,0.000014161336,0.0000076100714,0.000039221923,0.000010995391,0.000060649465],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988278,0.000086484244,0.0005060357,0.0003133981,0.000063150634,0.00020311761],"domain_scores_gemma":[0.9993236,0.00005074113,0.000297505,0.0002328245,0.0000074905815,0.00008785715],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008159714,0.00017474679,0.0003515013,0.000050329083,0.000020834845,0.0000032889411,0.00027374487,0.00009708974,0.00012635934],"category_scores_gemma":[0.00003360252,0.00013562797,0.000072576324,0.00007907564,0.0010233951,0.000049124123,0.0001717197,0.00009535804,0.000010997484],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000273429,0.00013764873,0.005157623,0.000026713866,0.000035528443,0.0000012498105,0.001131212,0.0000139353515,0.99115324,0.000018813156,0.00025471262,0.0017958938],"study_design_scores_gemma":[0.00090076675,0.00019890234,0.004554193,0.00006971311,0.00001609569,0.000013679022,0.00006111434,0.00006969325,0.99332803,0.00007999593,0.0005621021,0.00014568918],"about_ca_topic_score_codex":0.0005106135,"about_ca_topic_score_gemma":0.00013549467,"teacher_disagreement_score":0.005515676,"about_ca_system_score_codex":0.000013681846,"about_ca_system_score_gemma":0.00003185478,"threshold_uncertainty_score":0.5530748},"labels":[],"label_agreement":null},{"id":"W2112866641","doi":"10.1016/j.chemosphere.2006.10.012","title":"Dechlorination after thermal treatment of a TCE-contaminated aquifer: Laboratory experiments","year":2006,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Danmarks Tekniske Universitet; University of Toronto","keywords":"Microcosm; Dehalococcoides; Reductive dechlorination; Bioremediation; Chemistry; Environmental chemistry; Biodegradation; Vinyl chloride; Bioaugmentation; Microorganism; Contamination; Bacteria; Ecology; Organic chemistry; Geology; Biology","score_opus":0.005232861434002899,"score_gpt":0.20121504343890562,"score_spread":0.19598218200490272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112866641","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917144,0.000115841074,0.000006709391,0.000037991795,0.00007458292,0.00015420117,0.000018441666,0.000027031785,0.007850783],"genre_scores_gemma":[0.9977808,0.000010412006,0.00036493916,0.000050633847,0.00003076085,0.000013895291,0.000019502775,0.000008871496,0.0017201876],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99935687,0.000016908809,0.00016674692,0.00017565425,0.00014298306,0.00014084716],"domain_scores_gemma":[0.9997269,0.000006778805,0.00007367693,0.0001418942,0.00001295533,0.000037802092],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000034724082,0.00011245166,0.00010633222,0.0000047534686,0.00002548589,0.000009345557,0.00006812709,0.000067889276,0.007037101],"category_scores_gemma":[0.0000030855322,0.000091066984,0.000039270526,0.00013482812,0.000070274305,0.00009383938,0.000023880913,0.000019277646,0.0003230628],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054229975,0.00031283978,0.12728387,0.0000033881015,0.0000063025263,0.0000052397377,0.00021837564,0.000009361127,0.8665132,0.0000039224437,0.0008091041,0.004780181],"study_design_scores_gemma":[0.0005503288,0.00006230508,0.21271497,0.0000035447472,0.000006227763,3.4611477e-7,0.000039484534,0.00002493388,0.7777293,0.0000054585225,0.0087750545,0.00008808036],"about_ca_topic_score_codex":0.0002334416,"about_ca_topic_score_gemma":0.00009767794,"teacher_disagreement_score":0.08878393,"about_ca_system_score_codex":0.000198821,"about_ca_system_score_gemma":0.00000985173,"threshold_uncertainty_score":0.9938706},"labels":[],"label_agreement":null},{"id":"W2112947734","doi":"10.1128/jb.182.10.2725-2731.2000","title":"Haloalkane-Utilizing<i>Rhodococcus</i>Strains Isolated from Geographically Distinct Locations Possess a Highly Conserved Gene Cluster Encoding Haloalkane Catabolism","year":2000,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Quest University Canada","funders":"Masarykova Univerzita; Rijksuniversiteit Groningen","keywords":"Biology; Gene cluster; Genetics; Gene; Plasmid","score_opus":0.011685261499046596,"score_gpt":0.22705885660494424,"score_spread":0.21537359510589765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112947734","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960643,0.0000804948,0.00023634998,0.0021636144,0.00048646165,0.00017267991,0.00019158196,0.000029958304,0.00057455373],"genre_scores_gemma":[0.99632734,0.00031438083,0.0015055593,0.00133687,0.00021024338,0.000002040485,0.000113987226,0.000019138499,0.00017041134],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9976885,0.00028908462,0.0009694091,0.00033679456,0.00023358915,0.00048267227],"domain_scores_gemma":[0.99863786,0.0001514691,0.00053849834,0.00028058822,0.000065492946,0.0003261054],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00048316555,0.00026140627,0.0004810576,0.000101408776,0.00017380786,0.00007254362,0.00049595,0.00025795746,0.0098781185],"category_scores_gemma":[0.00009995881,0.00021426618,0.00018823233,0.00028699465,0.00041413674,0.00029640025,0.000093184695,0.00039166407,0.0003714896],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025564214,0.00017386622,0.057148583,0.0000042278507,0.00006931633,0.000073671516,0.00034434613,0.00006341427,0.9368247,0.000007696069,0.0009023029,0.004132241],"study_design_scores_gemma":[0.0016755591,0.0002835913,0.9695958,0.000043611068,0.00009023617,0.00042517507,0.000059840222,0.0002654512,0.009644729,0.00013952897,0.017411098,0.00036537083],"about_ca_topic_score_codex":0.00091594044,"about_ca_topic_score_gemma":0.00085306715,"teacher_disagreement_score":0.92718,"about_ca_system_score_codex":0.00011844125,"about_ca_system_score_gemma":0.00008009623,"threshold_uncertainty_score":0.991027},"labels":[],"label_agreement":null},{"id":"W2113988257","doi":"10.1139/t09-047","title":"Studies on soil contamination due to used motor oil and its remediation","year":2009,"lang":"en","type":"article","venue":"Canadian Geotechnical Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Environmental remediation; Contamination; Soil water; Motor oil; Human decontamination; Soil contamination; Environmental science; Geotechnical engineering; Soil test; Soil science; Environmental engineering; Environmental chemistry; Geology; Waste management; Chemistry; Engineering; Ecology","score_opus":0.017292087196432417,"score_gpt":0.23910611956152836,"score_spread":0.22181403236509595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2113988257","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97455907,0.00005016647,0.000029578816,0.024614047,0.00020479721,0.00007112354,0.000014005667,0.000019913341,0.00043732682],"genre_scores_gemma":[0.99340147,0.00008264435,0.00006798491,0.005679776,0.00011432839,0.0000012897407,0.000002783254,0.000005082856,0.0006446519],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990667,0.000044710167,0.00020726517,0.0001791763,0.00024250288,0.0002596062],"domain_scores_gemma":[0.9991472,0.000031166386,0.00007933107,0.00007688883,0.000030816977,0.0006346405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041028135,0.00010554337,0.00012861771,0.00011122355,0.000189376,0.00004971168,0.00012466918,0.00010288903,0.00025675],"category_scores_gemma":[0.00035423768,0.000090829555,0.000029982959,0.0001715151,0.000035481233,0.00012131485,0.000018170733,0.00020958512,0.00028006706],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000086224325,0.00008699886,0.00064411236,0.000007570635,0.000027160055,0.00028393863,0.001219116,0.0020940618,0.7023067,0.00032571735,0.06278912,0.23012932],"study_design_scores_gemma":[0.0040876274,0.003833411,0.63908076,0.0003328197,0.0001048548,0.00080381345,0.00094131293,0.008011498,0.09534822,0.0010692972,0.24423532,0.0021510671],"about_ca_topic_score_codex":0.00023653804,"about_ca_topic_score_gemma":0.0112640485,"teacher_disagreement_score":0.6384366,"about_ca_system_score_codex":0.0005958081,"about_ca_system_score_gemma":0.00005108591,"threshold_uncertainty_score":0.6285603},"labels":[],"label_agreement":null},{"id":"W2114942360","doi":"10.5539/ijc.v4n5p55","title":"Degradation of Polycyclic Aromatic Hydrocarbons from Soil Leachate by Water Hyacinth (Eichhornia crassipes)","year":2012,"lang":"en","type":"article","venue":"International Journal of Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Chemistry; Pyrene; Eichhornia crassipes; Hyacinth; Environmental chemistry; Polycyclic aromatic hydrocarbon; Naphthalene; Phenanthrene; Aromatic hydrocarbon; Hydrocarbon; Leachate; Degradation (telecommunications); Benzopyrene; Acenaphthene; Benzo(a)pyrene; Organic chemistry; Aquatic plant; Macrophyte","score_opus":0.005737780997049467,"score_gpt":0.21091175544346344,"score_spread":0.20517397444641397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114942360","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967602,0.000069720576,0.00015607981,0.0005919509,0.00036554926,0.000022641403,0.00002647918,0.0000057913935,0.0020015915],"genre_scores_gemma":[0.9988179,0.000036571575,0.00023469036,0.00011424707,0.0001915462,3.9790356e-7,0.000062733954,0.000007854217,0.00053403823],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987644,0.000021724965,0.00044819328,0.00008744829,0.0005234673,0.00015477609],"domain_scores_gemma":[0.999385,0.000029406285,0.00036978314,0.00008745492,0.000008694761,0.000119640245],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00019783233,0.00010467963,0.0001374671,0.000021705106,0.000019665182,0.00002041164,0.00033895654,0.000072253824,0.0015368699],"category_scores_gemma":[0.00004812907,0.00007639582,0.00008796528,0.00003783201,0.00007676053,0.00028143486,0.00006145949,0.00012831598,0.00010991524],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003013723,0.0001310352,0.037177533,0.0000014759839,0.000053199517,0.0000019356512,0.00017235553,0.000004385521,0.95826536,1.4659767e-7,0.0028294444,0.001333],"study_design_scores_gemma":[0.00039409133,0.000010029463,0.008037582,0.000024880455,0.00002080015,0.000025984771,0.00004276647,0.000046623845,0.988071,0.00009106094,0.0031449595,0.00009017332],"about_ca_topic_score_codex":0.00007782266,"about_ca_topic_score_gemma":0.000004764788,"teacher_disagreement_score":0.029805696,"about_ca_system_score_codex":0.00013334308,"about_ca_system_score_gemma":0.000011494916,"threshold_uncertainty_score":0.9993759},"labels":[],"label_agreement":null},{"id":"W2115308874","doi":"10.1186/1471-2180-9-263","title":"Burkholderia thailandensis harbors two identical rhl gene clusters responsible for the biosynthesis of rhamnolipids","year":2009,"lang":"en","type":"article","venue":"BMC Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":215,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Calgary; Armand Frappier Museum; Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada; Armand-Frappier Foundation","keywords":"Rhamnolipid; Burkholderia; Biology; Gene cluster; Pseudomonas aeruginosa; Gene; Mutant; Microbiology; Burkholderia pseudomallei; Bacteria; Genetics","score_opus":0.018023558712537507,"score_gpt":0.25416391629124474,"score_spread":0.23614035757870724,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115308874","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951462,0.000083778286,0.001696923,0.0017880413,0.00039491858,0.0004933938,0.00012421983,0.00003215482,0.00024035465],"genre_scores_gemma":[0.99357367,0.000044403514,0.0046515097,0.0011797376,0.000070182636,0.0000045991123,0.000023751396,0.000009810352,0.00044234018],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987322,0.00013610019,0.0003805785,0.0003334792,0.000065898406,0.00035172733],"domain_scores_gemma":[0.9990703,0.0003622093,0.0001538208,0.0003332165,0.000018687624,0.00006177779],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000561749,0.0001642558,0.00024100208,0.00004864176,0.00011470511,0.000017242046,0.0003740843,0.00013908042,0.0011124756],"category_scores_gemma":[0.0002018505,0.000108986795,0.00014877443,0.0001877838,0.00034214722,0.000049356364,0.00010059961,0.00007259716,0.00019872717],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021457522,0.00004970489,0.0050098486,0.0000040296763,0.000014902415,4.8498123e-7,0.000078549194,0.00003956087,0.9856147,0.000056473848,0.008308264,0.00060886366],"study_design_scores_gemma":[0.0009019339,0.0001635488,0.0317205,0.00000844634,0.000053347325,0.000026916017,0.00005677989,0.0002387151,0.9543401,0.00012514557,0.012157834,0.00020675185],"about_ca_topic_score_codex":0.00006202337,"about_ca_topic_score_gemma":0.00032343002,"teacher_disagreement_score":0.03127466,"about_ca_system_score_codex":0.000057967256,"about_ca_system_score_gemma":0.00003521838,"threshold_uncertainty_score":0.9998006},"labels":[],"label_agreement":null},{"id":"W2115447166","doi":"10.1111/j.1758-2229.2011.00255.x","title":"Transcriptional control of the main aromatic hydrocarbon efflux pump in <i>Pseudomonas</i>","year":2011,"lang":"en","type":"article","venue":"Environmental Microbiology Reports","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Efflux; Pseudomonas putida; Toluene; Bacteria; Pseudomonas; Chemistry; Pseudomonas aeruginosa; Solvent; Hydrocarbon; Aromatic hydrocarbon; Microbiology; Biochemistry; Environmental chemistry; Organic chemistry; Biology; Gene; Genetics","score_opus":0.005867920267889379,"score_gpt":0.16049877603810847,"score_spread":0.1546308557702191,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115447166","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99714714,0.00006264931,0.000021410553,0.00008069986,0.0003465505,0.00041496463,0.00004168412,0.0000110657575,0.0018738427],"genre_scores_gemma":[0.99898595,0.00001186232,0.00015055627,0.0004829668,0.000011078275,0.000009640938,0.0000265099,0.0000122957845,0.0003091461],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985108,0.00014558999,0.0005851884,0.00036274482,0.000109855195,0.0002858197],"domain_scores_gemma":[0.9993141,0.000022416023,0.00028772312,0.00031998253,5.7288406e-7,0.000055201013],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00033074862,0.00018459161,0.00023467677,0.000029858315,0.000051328843,0.0000027414467,0.00020968905,0.00015167044,0.0031721941],"category_scores_gemma":[0.000012861466,0.00013462591,0.0001539323,0.0001031215,0.0006240021,0.00007001185,0.00009783314,0.00015485316,0.00014048327],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016235454,0.00015717841,0.34293494,0.0000018754173,0.000010148111,0.000019723304,0.00020960733,0.000014363562,0.6564844,0.000002832066,0.00010476921,0.000043881464],"study_design_scores_gemma":[0.0006261217,0.000059703547,0.6785129,0.000014032884,0.000024792911,0.00043807898,0.00004725356,0.000011473784,0.31821126,0.00020903716,0.0016568854,0.00018851561],"about_ca_topic_score_codex":0.000102227474,"about_ca_topic_score_gemma":0.00011054114,"teacher_disagreement_score":0.3382732,"about_ca_system_score_codex":0.00016771936,"about_ca_system_score_gemma":0.000010677503,"threshold_uncertainty_score":0.997739},"labels":[],"label_agreement":null},{"id":"W2115922597","doi":"10.1080/713914243-203","title":"Indigenous Sediment Microbial Activity in Response to Nutrient Enrichment and Plant Growth Following a Controlled Oil Spill on a Freshwater Wetland","year":2003,"lang":"en","type":"article","venue":"Bioremediation Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Bedford Institute of Oceanography; Fisheries and Oceans Canada; University of Victoria; Biotechnology Research Institute","funders":"U.S. Environmental Protection Agency","keywords":"Environmental chemistry; Mineralization (soil science); Nitrate; Population; Rhizosphere; Nutrient; Ammonium; Chemistry; Agronomy; Denitrification; Nitrogen; Biology","score_opus":0.007352650728108896,"score_gpt":0.20986589854162924,"score_spread":0.20251324781352034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115922597","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978632,0.000026796826,0.00006729228,0.0008246789,0.00063609617,0.00038899953,0.000035155852,0.000013342078,0.00014448461],"genre_scores_gemma":[0.9985158,0.000088381574,0.00046148457,0.0007142253,0.000077717305,0.000013618742,0.000006269358,0.000011875237,0.00011066304],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978915,0.00041677448,0.0004190789,0.0003153781,0.0005051431,0.00045215874],"domain_scores_gemma":[0.99923605,0.00011496346,0.00019588732,0.00011048785,0.000016569082,0.00032603176],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018936206,0.0002133425,0.0002808944,0.00022116472,0.00020345482,0.00010150062,0.00011597503,0.00008810163,0.0003352891],"category_scores_gemma":[0.00031488988,0.00016312697,0.00008769686,0.000246204,0.000032575153,0.00011913426,0.000049514096,0.00021977775,0.00013350655],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035117974,0.00030237134,0.0573107,0.0000036164656,0.000025005342,0.000073518444,0.002170527,0.000038386144,0.93416834,0.000005550378,0.0014826279,0.0009075906],"study_design_scores_gemma":[0.041648354,0.0022596708,0.30782577,0.00016863678,0.00008083472,0.00017659369,0.000365148,0.00011753188,0.60051674,0.00013612816,0.045468874,0.0012357127],"about_ca_topic_score_codex":0.000036507678,"about_ca_topic_score_gemma":0.00023642884,"teacher_disagreement_score":0.33365157,"about_ca_system_score_codex":0.000598682,"about_ca_system_score_gemma":0.000064554355,"threshold_uncertainty_score":0.66521245},"labels":[],"label_agreement":null},{"id":"W2116107445","doi":"10.1128/aem.68.4.1728-1734.2002","title":"Carbon Isotope Fractionation during Aerobic Biodegradation of Trichloroethene by <i>Burkholderia cepacia</i> G4: a Tool To Map Degradation Mechanisms","year":2002,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Engineering and Physical Sciences Research Council; Natural Sciences and Engineering Research Council of Canada; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Deutscher Akademischer Austauschdienst; National Science Foundation","keywords":"Biodegradation; Fractionation; Isotope fractionation; Burkholderia; Chemistry; Degradation (telecommunications); Isotopes of carbon; Kinetic isotope effect; Environmental chemistry; Isotope; Microbial biodegradation; Trichloroethylene; Chromatography; Deuterium; Microorganism; Organic chemistry; Total organic carbon; Bacteria; Biology","score_opus":0.004665151587083319,"score_gpt":0.15920456535976843,"score_spread":0.1545394137726851,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2116107445","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99821126,0.000055265184,0.00030536822,0.00026191786,0.00011668779,0.00045871967,0.00012525688,0.000027611275,0.00043793648],"genre_scores_gemma":[0.99740314,0.0001555205,0.00109703,0.00036956862,0.000017476146,0.000021477195,0.00037378154,0.000016383483,0.0005456441],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998839,0.000036785204,0.00033404477,0.0004348238,0.000102067126,0.00025326328],"domain_scores_gemma":[0.99957687,0.0000186261,0.00016653967,0.00015944202,0.000002085729,0.00007643969],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001082223,0.00020508909,0.00020012775,0.0000602048,0.00010827995,0.000013189283,0.00011445894,0.00016319445,0.0017966793],"category_scores_gemma":[0.0000046083014,0.0001981717,0.00003460124,0.00013115181,0.00012490356,0.00009359192,0.00011818928,0.000091109076,0.00027955745],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031842617,0.0001220512,0.0009708678,0.0000063496564,0.000010582003,3.452488e-7,0.00015090845,0.000018784662,0.9950874,0.000026344807,0.0009718667,0.002602683],"study_design_scores_gemma":[0.000772435,0.000093968854,0.004751765,0.000004486683,0.000018161487,0.000012840658,0.000120898534,0.00008066737,0.9876689,0.00005999342,0.0061421674,0.00027375668],"about_ca_topic_score_codex":0.000069999325,"about_ca_topic_score_gemma":0.000015784566,"teacher_disagreement_score":0.007418515,"about_ca_system_score_codex":0.00016702,"about_ca_system_score_gemma":0.0000016364286,"threshold_uncertainty_score":0.9991158},"labels":[],"label_agreement":null},{"id":"W2116283133","doi":"10.1080/15320383.2011.571311","title":"The Effect of Temperature and Aeration Rate on Bioremediation of Diesel-contaminated Soil in Solid-phase Bench-scale Bioreactors","year":2011,"lang":"en","type":"article","venue":"Soil and Sediment Contamination An International Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Royal Military College of Canada","funders":"","keywords":"Aeration; Bioremediation; Volatilisation; Biodegradation; Bioreactor; Environmental chemistry; Chemistry; Soil water; Soil contamination; Environmental engineering; Contamination; Environmental science; Pulp and paper industry; Soil science; Ecology","score_opus":0.0073213288404787745,"score_gpt":0.2583330014067384,"score_spread":0.25101167256625967,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2116283133","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986963,0.000020868792,0.00001819306,0.00027278214,0.00042209856,0.00017417286,0.000018590024,0.000005945461,0.00037099904],"genre_scores_gemma":[0.9994101,0.00032136418,0.000019617319,0.00008837396,0.00004895817,0.000004261393,0.000038613583,0.0000059490953,0.00006274496],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99869674,0.00021527737,0.00043105014,0.00017009862,0.00036296566,0.0001238624],"domain_scores_gemma":[0.9992969,0.000105445004,0.0003527027,0.00007690593,0.00008908892,0.0000789651],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009835205,0.00013278465,0.00015113053,0.00013301542,0.000105412764,0.000053009724,0.00014988308,0.00008477347,0.0001263665],"category_scores_gemma":[0.000103554696,0.00008808708,0.000035764067,0.00010849775,0.00017605828,0.00038836835,0.000041040526,0.00015131691,0.0000033126921],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012233055,0.00038923425,0.3160672,0.000011954974,0.0000638306,0.0000075951107,0.0051247296,0.000044627915,0.61651653,0.00016360183,0.0001556569,0.060231753],"study_design_scores_gemma":[0.0028358125,0.0011917205,0.5430932,0.00004060919,0.00001616821,0.0000073740516,0.00036880764,0.0013347483,0.45085773,0.000058657926,0.000088856796,0.000106306245],"about_ca_topic_score_codex":0.00012099748,"about_ca_topic_score_gemma":0.00062871893,"teacher_disagreement_score":0.22702603,"about_ca_system_score_codex":0.00009578599,"about_ca_system_score_gemma":0.00001463319,"threshold_uncertainty_score":0.3592087},"labels":[],"label_agreement":null},{"id":"W2117195146","doi":"10.1021/acs.est.5b03618","title":"Bioaccessible Porosity in Soil Aggregates and Implications for Biodegradation of High Molecular Weight Petroleum Compounds","year":2015,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Imperial Oil Limited; Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Biodegradation; Porosity; Petroleum; Chemistry; Environmental chemistry; Environmental science; Geotechnical engineering; Waste management; Chemical engineering; Geology; Organic chemistry; Engineering","score_opus":0.008943797498818733,"score_gpt":0.22475839295304859,"score_spread":0.21581459545422985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117195146","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968887,0.00010728746,0.00039351324,0.0020173443,0.000051566472,0.00021814565,0.000047431105,0.000026527572,0.0002494673],"genre_scores_gemma":[0.9971594,0.00005955841,0.0026355158,0.000068471774,0.000003535215,0.000014687758,0.000019852287,0.000005120363,0.000033831235],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99895394,0.000012737828,0.00021566913,0.00037875806,0.00018019936,0.000258683],"domain_scores_gemma":[0.99954337,0.000011449062,0.00013277774,0.00021683726,0.0000043747054,0.00009122117],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003168975,0.00010620225,0.0001331169,0.00021756865,0.00010352483,0.000016457445,0.00036016555,0.000094190946,0.00004659825],"category_scores_gemma":[0.0000328784,0.00009654525,0.00001781516,0.0006520386,0.0018628353,0.00026243762,0.0003011957,0.000065611566,0.000021603291],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000059633353,0.00007499827,0.30432108,0.000001110528,8.943506e-7,2.5765124e-7,0.000028294002,0.00003947849,0.6919658,0.00040007013,0.000042319436,0.0031197432],"study_design_scores_gemma":[0.00055680325,0.00012281188,0.2930717,0.000004808793,0.0000052205583,0.00000772654,0.0001221617,0.00025566432,0.7005402,0.0042514424,0.00092347263,0.0001380458],"about_ca_topic_score_codex":0.00016477783,"about_ca_topic_score_gemma":0.000110783905,"teacher_disagreement_score":0.011249395,"about_ca_system_score_codex":0.00027279527,"about_ca_system_score_gemma":0.00002069374,"threshold_uncertainty_score":0.6863694},"labels":[],"label_agreement":null},{"id":"W2117602825","doi":"10.1111/j.1758-2229.2010.00153.x","title":"Enhanced biodegradation of petroleum hydrocarbons in the mycorrhizosphere of sub‐boreal forest soils","year":2010,"lang":"en","type":"article","venue":"Environmental Microbiology Reports","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Northern British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Humus; Rhizosphere; Soil water; Biodegradation; Microbial population biology; Environmental chemistry; Taiga; Environmental science; Chemistry; Soil science; Ecology; Biology; Bacteria","score_opus":0.003145525687064038,"score_gpt":0.18011756571910217,"score_spread":0.17697204003203815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117602825","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99707025,0.000022467666,0.000023513323,0.00007628053,0.00023363238,0.000258853,0.00003665654,0.000007886462,0.0022704545],"genre_scores_gemma":[0.9993606,0.00003121539,0.0002022559,0.00009117435,0.000016782707,0.000007166533,0.00021945657,0.000009612416,0.00006173115],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99866253,0.0000772368,0.00057872233,0.0003294936,0.00011400239,0.0002379866],"domain_scores_gemma":[0.99907225,0.000050717597,0.00045247102,0.00038489827,0.0000010820567,0.000038570957],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039636606,0.00016366091,0.00022334316,0.000031699277,0.000040099014,0.000004204526,0.00021264312,0.00017889118,0.00058052695],"category_scores_gemma":[0.000027827242,0.0001198853,0.000087697896,0.00011669003,0.000576242,0.00007781872,0.00010260066,0.00022244091,0.000055388984],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013613131,0.00014689207,0.29672992,0.0000018648126,0.000004596484,0.000008514021,0.0001478422,0.0000101426485,0.7022646,0.000003734336,0.00016451147,0.0005037888],"study_design_scores_gemma":[0.0001755069,0.00006635281,0.38191107,0.0000042156535,0.000009370466,0.00013065308,0.00008684005,0.000011788189,0.61691475,0.00005914666,0.00052832847,0.000101985046],"about_ca_topic_score_codex":0.00026793435,"about_ca_topic_score_gemma":0.0018818167,"teacher_disagreement_score":0.08534985,"about_ca_system_score_codex":0.000046679343,"about_ca_system_score_gemma":0.000011411438,"threshold_uncertainty_score":0.63563627},"labels":[],"label_agreement":null},{"id":"W2117918622","doi":"10.1111/j.1745-6592.2004.tb01297.x","title":"Microbial Population and Degradation Activity Changes Monitored During a Chlorinated Solvent Biovent Demonstration","year":2004,"lang":"en","type":"article","venue":"Groundwater Monitoring & Remediation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sheridan College","funders":"Oak Ridge National Laboratory; Johns Hopkins University; U.S. Department of Energy","keywords":"Propane; Microcosm; Trichloroethylene; Chemistry; Population; Bioremediation; Environmental chemistry; Toluene; Degradation (telecommunications); Cometabolism; Heterotroph; Solvent; Biodegradation; Organic chemistry; Bacteria; Contamination; Ecology; Biology","score_opus":0.013162077356234743,"score_gpt":0.2195461712402779,"score_spread":0.20638409388404316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117918622","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973038,0.000015647809,0.0005688767,0.0005314883,0.0010235416,0.00040931941,0.0000056409467,0.00012343885,0.00001828657],"genre_scores_gemma":[0.99829745,0.000096987875,0.0009574735,0.000012961052,0.0004430235,0.000019745108,0.0000776578,0.000020197262,0.0000744795],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986009,0.00005206304,0.00023422558,0.0004219273,0.00037393853,0.00031694924],"domain_scores_gemma":[0.99947447,0.000012112901,0.00021254398,0.00016004786,0.000024986019,0.00011583576],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022246467,0.0002188127,0.00015211485,0.000100484045,0.000290627,0.0001296919,0.00009231811,0.00015412322,0.000031836465],"category_scores_gemma":[0.00003017954,0.00021271496,0.000039396473,0.00024248566,0.00005590116,0.0006627271,0.000081914906,0.00013313637,0.00006443524],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051404615,0.000071199356,0.2132363,0.000014419661,0.000007967421,0.0000019882748,0.00028785368,0.00015402639,0.7779252,0.0000034509164,0.000004444242,0.008241734],"study_design_scores_gemma":[0.00054102216,0.00004871631,0.55086964,0.000021848082,0.0000125684965,0.0000052426426,0.000023459788,0.000037284728,0.44821635,0.00003892476,0.000036936646,0.00014797277],"about_ca_topic_score_codex":0.0013255184,"about_ca_topic_score_gemma":0.00036952161,"teacher_disagreement_score":0.33763337,"about_ca_system_score_codex":0.00080488157,"about_ca_system_score_gemma":0.00001061135,"threshold_uncertainty_score":0.86742646},"labels":[],"label_agreement":null},{"id":"W2118667220","doi":"10.1128/aem.02216-13","title":"Aerobic Biofilms Grown from Athabasca Watershed Sediments Are Inhibited by Increasing Concentrations of Bituminous Compounds","year":2013,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Environment and Climate Change Canada; National Research Council Canada","funders":"","keywords":"Environmental chemistry; Biofilm; Cyanobacteria; Bacteroidetes; Biomass (ecology); Extracellular polymeric substance; Betaproteobacteria; Biology; Chemistry; Botany; Ecology; Bacteria; Actinobacteria","score_opus":0.00423548832657294,"score_gpt":0.15986205984821555,"score_spread":0.1556265715216426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118667220","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983358,0.00007658265,0.000014432684,0.00013064466,0.00006811681,0.00039998945,0.00050247763,0.000024992176,0.00044699904],"genre_scores_gemma":[0.99648863,0.00008659311,0.00056243106,0.0006638,0.000017100314,0.000012612351,0.002083727,0.000015451595,0.00006966099],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987381,0.00006703796,0.0003551128,0.00043491187,0.00007440769,0.00033042845],"domain_scores_gemma":[0.999456,0.000045129593,0.00020085173,0.00017092793,0.0000018187982,0.00012530404],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007974719,0.00023549245,0.00027313203,0.000027640792,0.00012476306,0.000022580633,0.0001538441,0.00017763843,0.0036520127],"category_scores_gemma":[0.0000026413782,0.00020351601,0.00004238983,0.00007352714,0.00068596564,0.000108780565,0.0002190826,0.000111453024,0.00064785365],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017764512,0.00011668809,0.12882762,0.0000027074097,0.000022546634,5.5323846e-7,0.0001638866,0.0000013859146,0.86644423,0.0000022148824,0.0040107802,0.00038963108],"study_design_scores_gemma":[0.0010917039,0.000060795803,0.12763219,0.00000872129,0.000024742063,0.000014093273,0.00042020844,0.000025336447,0.8675059,0.00002992365,0.0028865915,0.0002998118],"about_ca_topic_score_codex":0.0014333625,"about_ca_topic_score_gemma":0.00003158566,"teacher_disagreement_score":0.003004159,"about_ca_system_score_codex":0.00009977401,"about_ca_system_score_gemma":0.0000033385536,"threshold_uncertainty_score":0.9972588},"labels":[],"label_agreement":null},{"id":"W2118786258","doi":"10.1139/s03-063","title":"Evaluating the dissolution and natural attenuation of jet fuel at a former tank farm","year":2004,"lang":"en","type":"article","venue":"Journal of Environmental Engineering and Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"Ministère de la Défense Nationale; Ministry of Environment","keywords":"Environmental science; Dissolution; Groundwater; Attenuation; Biodegradation; Jet fuel; Plume; Environmental engineering; Aquifer; Contamination; Petroleum; Jet (fluid); Borehole; Waste management; Geotechnical engineering; Geology; Chemistry; Ecology; Engineering","score_opus":0.010042986040520209,"score_gpt":0.2310454142145439,"score_spread":0.22100242817402369,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118786258","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993256,0.00021047604,0.00012282231,0.00014525055,0.00010646469,0.00005437898,0.0000030146327,0.0000019338047,0.00003007613],"genre_scores_gemma":[0.99858195,0.00012973291,0.0012167357,0.000031289885,0.000015067432,2.6137332e-7,3.745176e-7,0.0000025852567,0.000022020187],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99922335,0.000007699551,0.00018831753,0.00009739128,0.00036467303,0.00011857335],"domain_scores_gemma":[0.9997201,0.00002052957,0.00014197877,0.00005440547,0.0000035545588,0.00005943854],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005872375,0.00006670557,0.0000745215,0.000030910574,0.00010548806,0.000016826694,0.00010201844,0.000018263478,0.0000396397],"category_scores_gemma":[0.000055933153,0.00004169587,0.000022766173,0.00010348457,0.0003243725,0.00021729709,0.00009875233,0.0000790269,0.0000032047121],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010029676,0.000013193343,0.0077416683,0.000003177094,0.0000020874813,5.036583e-7,0.0003887674,0.004124895,0.9847988,0.000010215828,0.0000019165905,0.0029047409],"study_design_scores_gemma":[0.000585057,0.00025666546,0.9305612,0.000031460622,0.000016981709,0.00014734648,0.00013906218,0.009699226,0.058245648,0.000044443856,0.00016341271,0.00010951204],"about_ca_topic_score_codex":0.000007574602,"about_ca_topic_score_gemma":0.000005078824,"teacher_disagreement_score":0.92655313,"about_ca_system_score_codex":0.00018270723,"about_ca_system_score_gemma":0.000007123087,"threshold_uncertainty_score":0.17003082},"labels":[],"label_agreement":null},{"id":"W2119668245","doi":"10.1002/bit.21610","title":"Enhancement of PCB degradation by <i>Burkholderia xenovorans</i> LB400 in biphasic systems by manipulating culture conditions","year":2007,"lang":"en","type":"article","venue":"Biotechnology and Bioengineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Biodegradation; Chemistry; Bioaugmentation; Bioreactor; Aqueous two-phase system; Aqueous solution; Environmental chemistry; Chromatography; Extraction (chemistry); Microorganism; Bacterial growth; Organic chemistry; Bacteria","score_opus":0.0059298441994178564,"score_gpt":0.20483859054911702,"score_spread":0.19890874634969916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2119668245","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9925693,0.0004627023,0.006312839,0.0001578974,0.00011140408,0.00017619034,0.00003906364,0.00005180666,0.00011878208],"genre_scores_gemma":[0.9991961,0.00016491345,0.0004449379,0.000027240323,0.0000065277804,0.0000028034367,0.00006179404,0.000005895031,0.000089781955],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992621,0.0000076665,0.0002576407,0.00018884997,0.000084095045,0.0001996778],"domain_scores_gemma":[0.9997662,0.0000102426375,0.00009605688,0.000088789195,0.000004146505,0.00003461428],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017495906,0.00011007209,0.0001240325,0.00006452535,0.000042590287,0.000008538328,0.00008536084,0.0002471522,0.000068192894],"category_scores_gemma":[0.000010428942,0.00010031826,0.000014435217,0.00028787908,0.000101347905,0.000072876086,0.00003914869,0.00011660015,0.000008923752],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000003883193,0.000024422388,0.007208098,0.000016121132,0.000005689853,0.0000011245689,0.00003592295,0.000026299698,0.9909838,0.000086143664,0.00072926236,0.0008792679],"study_design_scores_gemma":[0.00028925439,0.00005290622,0.0027809741,0.000032285236,0.0000060273337,0.000006212473,0.00011895541,0.0007189246,0.99178886,0.0000037906768,0.0040662936,0.00013551846],"about_ca_topic_score_codex":0.00011425621,"about_ca_topic_score_gemma":0.000057676007,"teacher_disagreement_score":0.006626792,"about_ca_system_score_codex":0.000058074158,"about_ca_system_score_gemma":0.00000200693,"threshold_uncertainty_score":0.40908602},"labels":[],"label_agreement":null},{"id":"W2120046852","doi":"10.1186/2046-9063-8-17","title":"Disruption of Yarrowia lipolytica biofilms by rhamnolipid biosurfactant","year":2012,"lang":"en","type":"article","venue":"Aquatic Biosystems","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Bhabha Atomic Research Centre","keywords":"Rhamnolipid; Yarrowia; Biofilm; Chemistry; Pulmonary surfactant; Microbiology; Aspergillus fumigatus; Chromatography; Bacteria; Pseudomonas aeruginosa; Biology; Yeast; Biochemistry","score_opus":0.008577604419914526,"score_gpt":0.21496871415878405,"score_spread":0.2063911097388695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120046852","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99387974,0.00023658476,0.00010067088,0.0002679352,0.0007974976,0.00034930394,0.000085197586,0.000054653905,0.004228439],"genre_scores_gemma":[0.9988275,0.000045059118,0.00026797503,0.00013381946,0.000088432134,0.000004171236,0.00003722603,0.00001773518,0.0005780601],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982363,0.000105282656,0.00053494895,0.00024019282,0.0004284696,0.00045480407],"domain_scores_gemma":[0.9990901,0.00005619774,0.0002858104,0.0003310152,0.000007926881,0.00022897014],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0005504408,0.0001985759,0.00026410533,0.000040997842,0.00006524049,0.000020088832,0.0002269834,0.00015372687,0.0021561005],"category_scores_gemma":[0.000061946695,0.0001555174,0.00008680088,0.0003505112,0.00016902434,0.00025329896,0.000083238425,0.00008424851,0.0028881757],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000924917,0.00014475918,0.11137016,0.00002391349,0.000013926797,2.0068883e-7,0.0003204,4.929809e-7,0.8764796,0.00005474036,0.010472579,0.0011099629],"study_design_scores_gemma":[0.0006914272,0.0001698769,0.02653453,0.00007444118,0.000056376048,0.000017387885,0.00038615585,0.0007422745,0.91483176,0.000015764848,0.05591523,0.0005647976],"about_ca_topic_score_codex":0.00070083136,"about_ca_topic_score_gemma":0.000059660942,"teacher_disagreement_score":0.084835626,"about_ca_system_score_codex":0.000112402675,"about_ca_system_score_gemma":0.000010022189,"threshold_uncertainty_score":0.99875605},"labels":[],"label_agreement":null},{"id":"W2120422095","doi":"10.1111/j.1365-2672.2006.03268.x","title":"Biodegradation of polychlorinated biphenyls in Aroclor 1232 and production of metabolites from 2,4,4'-trichlorobiphenyl at low temperature by psychrotolerant Hydrogenophaga sp. strain IA3-A","year":2007,"lang":"en","type":"article","venue":"Journal of Applied Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Agilent Technologies","keywords":"Biodegradation; Biphenyl; Chemistry; Metabolism; Degradation (telecommunications); Polychlorinated biphenyl; Strain (injury); Biotransformation; Environmental chemistry; Bacteria; Bioremediation; Chromatography; Metabolic pathway; Gas chromatography; Biochemistry; Organic chemistry; Enzyme; Biology","score_opus":0.004294000713376962,"score_gpt":0.19718076368318482,"score_spread":0.19288676296980786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120422095","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983628,0.0005798954,0.00002093961,0.00013707948,0.00029769193,0.00032648636,0.00020336898,0.0000053506606,0.000066406414],"genre_scores_gemma":[0.9981014,0.00039302892,0.0012210871,0.00008292772,0.0000577033,0.0000010311277,0.00009918127,0.000011054497,0.00003259036],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983652,0.000045808323,0.00093021675,0.00028322227,0.00012245653,0.00025305327],"domain_scores_gemma":[0.99881655,0.000051633666,0.00087142794,0.00013941279,0.000040775452,0.00008018562],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00067084335,0.00019414813,0.00047774284,0.00017000486,0.000039127273,0.0000067195942,0.00018156321,0.00023144073,0.00028694386],"category_scores_gemma":[0.00002117003,0.00015383922,0.000067180634,0.00041730594,0.00028669907,0.00010083098,0.00006334704,0.00020725247,0.000009771091],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007236762,0.00021977788,0.004718244,0.000016844391,0.000039746752,0.0000033795334,0.00038505768,0.000029071027,0.9906294,0.0000064153674,0.0007312099,0.0024972165],"study_design_scores_gemma":[0.0011248178,0.00011488968,0.0121548595,0.000025265408,0.000027369835,0.000044534874,0.0001457753,0.00000237357,0.9840094,0.00006814384,0.0021425623,0.00014004171],"about_ca_topic_score_codex":0.00006829076,"about_ca_topic_score_gemma":0.00013070332,"teacher_disagreement_score":0.0074366154,"about_ca_system_score_codex":0.00012184052,"about_ca_system_score_gemma":0.000022366734,"threshold_uncertainty_score":0.6273382},"labels":[],"label_agreement":null},{"id":"W2120720879","doi":"10.1002/bit.1060","title":"Transformation of 2,4,6‐trinitrotoluene (TNT) by immobilized <i>Phanerochaete chrysosporium</i> under fed‐batch and continuous TNT feeding conditions","year":2001,"lang":"en","type":"article","venue":"Biotechnology and Bioengineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Defence Research and Development Canada; Department of National Defence; Biotechnology Research Institute","funders":"","keywords":"Trinitrotoluene; Glycerol; Chrysosporium; Chemistry; Phanerochaete; Bioreactor; Transformation (genetics); Nuclear chemistry; Biodegradation; Biochemistry; Organic chemistry; Enzyme","score_opus":0.0049541757475149,"score_gpt":0.1948601976871464,"score_spread":0.18990602193963152,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120720879","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99647665,0.00019932301,0.0015041444,0.0011586249,0.00007210745,0.00023719665,0.000035824807,0.000110849556,0.00020525942],"genre_scores_gemma":[0.9985739,0.00093799975,0.0003137747,0.00008564739,0.000009431367,0.0000065949857,0.000019843936,0.000008051715,0.000044780725],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992327,0.000008950225,0.0002382681,0.00020475713,0.00010409584,0.00021119045],"domain_scores_gemma":[0.999732,0.0000187784,0.00008601068,0.00009526875,0.000010151648,0.000057764777],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014291095,0.00013942647,0.00018329274,0.00007262102,0.00008068256,0.000014070913,0.00008507083,0.0002590213,0.00013748022],"category_scores_gemma":[0.00001564915,0.00012757884,0.000024282075,0.00023418326,0.00023467556,0.000121885554,0.000052561933,0.00012778502,0.000009999708],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020564083,0.000024788502,0.0023009588,0.0000142035315,0.000013903992,0.0000015919094,0.000071492614,0.000016177204,0.99528486,0.00020465053,0.000107476284,0.0019393452],"study_design_scores_gemma":[0.0012016518,0.00020205385,0.008832361,0.000034113957,0.00003308126,0.000103367136,0.00029232303,0.0011472037,0.9804769,0.00007156555,0.007301968,0.00030339736],"about_ca_topic_score_codex":0.000046858717,"about_ca_topic_score_gemma":0.000021611626,"teacher_disagreement_score":0.014807934,"about_ca_system_score_codex":0.000040666368,"about_ca_system_score_gemma":0.0000041262088,"threshold_uncertainty_score":0.5202514},"labels":[],"label_agreement":null},{"id":"W2121231969","doi":"10.1002/cjce.5450840311","title":"Mass Transfer and Bioremediation of Naphthalene and Methyl Naphthalenes in Baffled and Bead Mill Bioreactors","year":2006,"lang":"en","type":"article","venue":"The Canadian Journal of Chemical Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Environment and Climate Change Canada; University of Saskatchewan","funders":"","keywords":"Bioremediation; Bioreactor; Naphthalene; Dissolution; Mass transfer; Chemistry; Pseudomonas putida; Baffle; Volume (thermodynamics); Chromatography; Mass transfer coefficient; Biodegradation; Chemical engineering; Organic chemistry; Contamination; Thermodynamics","score_opus":0.004255687227501765,"score_gpt":0.15895207313171078,"score_spread":0.154696385904209,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121231969","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990917,0.00044254828,0.000015857218,0.00031888005,0.00003678653,0.00004712895,0.00001023037,0.0000016229733,0.00003526915],"genre_scores_gemma":[0.9996782,0.00003288122,0.00024088206,0.000016396842,0.000021750731,2.5556326e-7,0.0000013181523,0.0000055788073,0.0000027413846],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99947256,0.000011775217,0.00021920739,0.00007173972,0.000094012896,0.00013069432],"domain_scores_gemma":[0.9997196,0.000048428872,0.000040765266,0.000039235016,0.000010263772,0.00014167576],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023276685,0.00007870755,0.0001288925,0.00007494034,0.000016099366,0.000013304739,0.0000644402,0.00006107795,0.000032923548],"category_scores_gemma":[0.000045428027,0.000057429348,0.000017340848,0.00012690306,0.00012517808,0.000075260075,0.0000073956066,0.00010164765,3.1766132e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005300997,0.0000029988569,0.036869746,0.000010448979,0.000004309631,0.0000048310394,0.00012845924,0.00011046523,0.9623685,0.000013767011,0.000014614914,0.00046655987],"study_design_scores_gemma":[0.0005449139,0.00003033686,0.15896071,0.000048581864,0.000018198742,0.00006787173,0.000017757367,0.0008623468,0.83905447,0.00008922998,0.00016932686,0.0001362255],"about_ca_topic_score_codex":0.0036152054,"about_ca_topic_score_gemma":0.0018126863,"teacher_disagreement_score":0.12331401,"about_ca_system_score_codex":0.00005380841,"about_ca_system_score_gemma":0.000020384228,"threshold_uncertainty_score":0.5465133},"labels":[],"label_agreement":null},{"id":"W2121394375","doi":"10.1007/s00253-005-0150-3","title":"Production of rhamnolipids by Pseudomonas aeruginosa","year":2005,"lang":"en","type":"review","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":490,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Pseudomonas aeruginosa; Polyhydroxyalkanoates; Pseudomonadaceae; Microbiology; Pseudomonadales; Bacteria; Lipopolysaccharide; Virulence; Biology; Pseudomonas; Chemistry; Biochemistry; Gene; Genetics; Immunology","score_opus":0.010377847080091714,"score_gpt":0.23370136597250113,"score_spread":0.22332351889240942,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121394375","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0018497318,0.9955174,0.000012633766,0.00040647417,0.0003710623,0.00086163956,0.00017828286,0.00012037806,0.00068244163],"genre_scores_gemma":[0.0016043338,0.9968908,0.0005559477,0.000105063016,0.00005926059,0.000019978634,0.0003143441,0.000021826927,0.00042848583],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981969,0.00005910053,0.0005778863,0.0007557444,0.000041799027,0.0003685413],"domain_scores_gemma":[0.9990895,0.0000342458,0.00045480736,0.0003691552,0.000005611272,0.00004672468],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00020921994,0.0004010189,0.0010643543,0.00013007478,0.00007712134,0.000004980523,0.00036594187,0.0019422396,0.00053829007],"category_scores_gemma":[0.00001965185,0.00030847793,0.00011542961,0.00035561895,0.0013538495,0.000026352203,0.0003680207,0.00048908126,0.00052324374],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000059949916,0.000053631946,0.000004531896,0.00023643888,0.000035182613,4.3899087e-7,0.000008948407,4.270463e-8,0.34528172,0.00012985311,0.0138764875,0.64036673],"study_design_scores_gemma":[0.00013189221,0.000047339177,0.000001232149,0.00010920232,0.00011854893,0.00014073506,0.000007261488,5.4537885e-8,0.04003248,0.000016889058,0.95909834,0.00029603916],"about_ca_topic_score_codex":0.00001132252,"about_ca_topic_score_gemma":0.0000246295,"teacher_disagreement_score":0.94522184,"about_ca_system_score_codex":0.000082536055,"about_ca_system_score_gemma":0.000024154284,"threshold_uncertainty_score":0.99993676},"labels":[],"label_agreement":null},{"id":"W2121731744","doi":"10.3389/fmicb.2013.00140","title":"In situ detection of anaerobic alkane metabolites in subsurface environments","year":2013,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Shell Canada; Baker Hughes; Alberta Innovates; Yara International; Suncor Energy Incorporated; ConocoPhillips","keywords":"In situ; Alkane; Anaerobic exercise; Environmental chemistry; Chemistry; Environmental science; Biology; Hydrocarbon; Organic chemistry","score_opus":0.003935569445016212,"score_gpt":0.18304743954636837,"score_spread":0.17911187010135216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121731744","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985129,0.0002601812,0.00013124109,0.0001168068,0.0004201984,0.00034267316,0.000009725714,0.000005015209,0.00020122468],"genre_scores_gemma":[0.9965776,0.00021259721,0.0027275884,0.00018836067,0.0000067459287,0.000009091391,0.00001838773,0.000008145601,0.00025144898],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99869955,0.00016387737,0.0004197033,0.00032605403,0.000048412036,0.0003424052],"domain_scores_gemma":[0.9996645,0.000018514416,0.00011608101,0.00016101316,0.0000023258335,0.00003759501],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025433153,0.00014429262,0.00029382703,0.00017474373,0.000012811451,0.000004854135,0.00020383779,0.00018840839,0.00090010685],"category_scores_gemma":[0.000025595129,0.00013771352,0.00003537713,0.0003783014,0.00022145521,0.00018335179,0.000093475806,0.00016371798,0.00031308804],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015343534,0.0000767558,0.235861,0.0000026242992,0.0000030183778,0.0000018572015,0.0001609638,0.00007309731,0.7618213,6.294044e-7,0.0009171238,0.0010662747],"study_design_scores_gemma":[0.0006174546,0.000033062912,0.3235809,0.000006053249,0.0000022311701,0.0000027484011,0.000109139706,0.000048136942,0.67088413,0.00008152786,0.0045029502,0.00013169728],"about_ca_topic_score_codex":0.001064058,"about_ca_topic_score_gemma":0.0022644333,"teacher_disagreement_score":0.0909372,"about_ca_system_score_codex":0.00023834173,"about_ca_system_score_gemma":0.0000057940206,"threshold_uncertainty_score":0.98555386},"labels":[],"label_agreement":null},{"id":"W2122789270","doi":"10.1128/jb.186.14.4705-4713.2004","title":"Altering Toluene 4-Monooxygenase by Active-Site Engineering for the Synthesis of 3-Methoxycatechol, Methoxyhydroquinone, and Methylhydroquinone","year":2004,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":82,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Science Foundation","keywords":"Toluene; Monooxygenase; Guaiacol; Catechol; Benzene; Phenol; Cresol; Medicinal chemistry; Mutant; Stereochemistry; Catalysis; Biology; Chemistry; Organic chemistry; Enzyme; Biochemistry; Cytochrome P450","score_opus":0.008952903433467429,"score_gpt":0.2291338971976443,"score_spread":0.22018099376417685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122789270","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98440903,0.00018430843,0.014373716,0.00062352687,0.00019103804,0.00014484055,0.000044214583,0.000005550963,0.000023749888],"genre_scores_gemma":[0.9800773,0.00035361186,0.019372117,0.00011828401,0.00004975647,0.0000040256377,0.0000015921977,0.000012052561,0.000011231784],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99901986,0.000065168315,0.00045670083,0.00014453164,0.00010787955,0.00020585913],"domain_scores_gemma":[0.9988902,0.0004324263,0.0004357748,0.0001260992,0.000024380415,0.00009110737],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008414246,0.00013205499,0.00033581132,0.000059071142,0.00005424867,0.000013199585,0.00020418761,0.00009692937,0.00011514016],"category_scores_gemma":[0.0003259369,0.000089064626,0.0001037285,0.00011170552,0.00013147922,0.00017469312,0.000086663116,0.00014368999,0.0000043840028],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001221216,0.000030737432,0.00036768496,0.000011838986,0.00005511081,0.0000024940757,0.000160422,0.0006756008,0.9843024,0.000007747927,0.000074478325,0.014189359],"study_design_scores_gemma":[0.0007019568,0.00026755052,0.019119931,0.000030705403,0.00007613307,0.00012497036,0.000044486795,0.00022906622,0.9727825,0.00006929235,0.0064136465,0.00013979824],"about_ca_topic_score_codex":0.000076091994,"about_ca_topic_score_gemma":0.000011644716,"teacher_disagreement_score":0.018752245,"about_ca_system_score_codex":0.000085333995,"about_ca_system_score_gemma":0.000015399404,"threshold_uncertainty_score":0.363195},"labels":[],"label_agreement":null},{"id":"W2123447379","doi":"10.1021/es4006652","title":"Joint Photomicrobial Process for the Degradation of the Insensitive Munition <i>N</i>-Guanylurea-dinitramide (FOX-12)","year":2013,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Department of National Defence; Defence Research and Development Canada; National Research Council Canada","funders":"Ministère de la Défense Nationale","keywords":"Chemistry; Biodegradation; Degradation (telecommunications); Environmental chemistry; Contamination; Organic chemistry; Ecology","score_opus":0.01135204878207621,"score_gpt":0.2078088932790703,"score_spread":0.19645684449699408,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123447379","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958387,0.000011671612,0.0002132176,0.0019843315,0.0001808089,0.0012303488,0.000038581024,0.00003623043,0.00046610303],"genre_scores_gemma":[0.9988926,0.000021359221,0.00025070537,0.00048194433,0.000011300896,0.000060772127,0.000007236703,0.000009098281,0.00026500146],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99863017,0.000028816161,0.0002771967,0.00035212384,0.0003582378,0.0003534576],"domain_scores_gemma":[0.999308,0.000039323288,0.00023631858,0.000364837,0.000010411435,0.000041098978],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0003556836,0.00015107574,0.00012552978,0.00008532967,0.0005453762,0.000029235087,0.0007072803,0.000114496834,0.0008154804],"category_scores_gemma":[0.000084217674,0.00009000011,0.00006732871,0.00064303156,0.0038552405,0.0003198536,0.00033622675,0.00016881985,0.00017577811],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000065407794,0.00007119073,0.0066002915,0.0000019521774,0.0000033126937,1.194231e-7,0.00019890517,0.00007059906,0.9873541,0.00003722476,0.000215672,0.0054400745],"study_design_scores_gemma":[0.00028152292,0.00006604149,0.06842122,0.000007539791,0.000011042496,0.0000148464605,0.0010304514,0.0006674675,0.9275877,0.00049737026,0.0012866288,0.00012815185],"about_ca_topic_score_codex":0.00015014861,"about_ca_topic_score_gemma":0.0000803269,"teacher_disagreement_score":0.06182093,"about_ca_system_score_codex":0.00028597156,"about_ca_system_score_gemma":0.000028110286,"threshold_uncertainty_score":0.9988557},"labels":[],"label_agreement":null},{"id":"W2123809357","doi":"10.1016/j.abb.2011.09.016","title":"Insight into the metabolism of 1,1,1-trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) by biphenyl dioxygenases","year":2011,"lang":"en","type":"article","venue":"Archives of Biochemistry and Biophysics","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Residue (chemistry); Biphenyl; Stereospecificity; Chemistry; Stereochemistry; Metabolism; Biochemistry; Dioxygenase; Gene; Organic chemistry","score_opus":0.006786626270491838,"score_gpt":0.18014602638596686,"score_spread":0.17335940011547502,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123809357","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938037,0.00062783994,0.000031284577,0.000051415973,0.00004765207,0.000110621884,0.000071986935,0.00001030363,0.005245205],"genre_scores_gemma":[0.9979394,0.0007117816,0.0008794659,0.00008571442,0.000036805613,0.000002741045,0.000027930791,0.000007676832,0.00030845034],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99909824,0.00003401473,0.00028319177,0.0002532767,0.00016091506,0.00017033164],"domain_scores_gemma":[0.99934244,0.000062006264,0.00021849446,0.0002806193,0.000007569501,0.00008887146],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000073613875,0.00017059929,0.0002142914,0.000014798553,0.00006325898,0.0000069605676,0.00031884955,0.000059922895,0.0002510167],"category_scores_gemma":[0.00002967762,0.00011121906,0.0000921167,0.00019425317,0.00093795924,0.000067880996,0.00022740803,0.00009236028,0.000009017931],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000070643415,0.00014861533,0.0017548729,0.000031571137,0.000021591757,5.09262e-7,0.0024899673,2.3177702e-7,0.9855669,0.000034090153,0.0002820931,0.009598883],"study_design_scores_gemma":[0.00024195679,0.00004564706,0.009583755,0.00001274697,0.000027084832,0.0000012061467,0.00011441317,0.000009244829,0.9866068,0.0005895191,0.00262267,0.00014497852],"about_ca_topic_score_codex":0.0004479906,"about_ca_topic_score_gemma":0.000011817902,"teacher_disagreement_score":0.009453905,"about_ca_system_score_codex":0.0000054433553,"about_ca_system_score_gemma":0.000012671564,"threshold_uncertainty_score":0.45353818},"labels":[],"label_agreement":null},{"id":"W2124523027","doi":"10.1016/j.bbrc.2004.07.115","title":"Nitroreductase catalyzed biotransformation of CL-20","year":2004,"lang":"en","type":"article","venue":"Biochemical and Biophysical Research Communications","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Research Council Canada; Natural Sciences and Engineering Research Council of Canada; Strategic Environmental Research and Development Program; National Research Council","keywords":"Chemistry; Nitroreductase; Biotransformation; Formic acid; Glyoxal; Metabolite; Nitrite; Formaldehyde; Stereochemistry; Medicinal chemistry; Organic chemistry; Biochemistry; Enzyme; Nitrate","score_opus":0.04820723124346524,"score_gpt":0.3299669509352765,"score_spread":0.28175971969181124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124523027","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99309707,0.000079058,0.000028850922,0.0041199853,0.00000814693,0.00020391826,0.000075901116,0.000018388148,0.002368699],"genre_scores_gemma":[0.99770534,0.0003427937,0.0017194484,0.00004080053,0.000016572449,0.000008459565,0.00013328067,0.000004633641,0.000028648665],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989881,0.000076802586,0.0002133853,0.00016675325,0.00034341848,0.00021153076],"domain_scores_gemma":[0.9991356,0.0001211446,0.000040276107,0.0004971724,0.000049834456,0.0001559759],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029941983,0.00007936101,0.00010789066,0.00004322777,0.00016910884,0.000020347918,0.00048156985,0.000075595606,0.0001012442],"category_scores_gemma":[0.00015286599,0.00006290204,0.000044964636,0.0005146719,0.0014151034,0.00011227173,0.0003297995,0.00022277051,0.00019383208],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001985756,0.00028418144,0.00012393796,0.000010077673,0.00000451692,1.4791034e-7,0.00017565956,4.5513482e-7,0.99619985,0.0015327078,0.0004794646,0.0011691374],"study_design_scores_gemma":[0.00035863233,0.000050844275,0.0014766802,0.000017943588,0.000005487341,0.0000014695078,0.00008930194,0.000057589827,0.99322534,0.002060396,0.0025667048,0.000089587134],"about_ca_topic_score_codex":0.00021036982,"about_ca_topic_score_gemma":0.000028666755,"teacher_disagreement_score":0.0046083103,"about_ca_system_score_codex":0.00007496821,"about_ca_system_score_gemma":0.000029552219,"threshold_uncertainty_score":0.52140075},"labels":[],"label_agreement":null},{"id":"W2124752190","doi":"10.1002/bit.21188","title":"Expression of bacterial biphenyl‐chlorobiphenyl dioxygenase genes in tobacco plants","year":2006,"lang":"en","type":"article","venue":"Biotechnology and Bioengineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Dioxygenase; Ferredoxin; Oxygenase; Nicotiana tabacum; Biochemistry; Reductase; Biology; Nicotiana benthamiana; Chemistry; Enzyme; Gene","score_opus":0.004470278516533399,"score_gpt":0.17267257947025624,"score_spread":0.16820230095372285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124752190","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991982,0.0001805963,0.000119691664,0.000105080966,0.00012356682,0.00008934548,0.000020030408,0.000057567726,0.00010591125],"genre_scores_gemma":[0.99851626,0.00016085307,0.0012411716,0.000009459984,0.000027195225,0.0000018097855,0.000013613203,0.000006008796,0.000023621635],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993484,0.000013631986,0.00019847522,0.00019325314,0.000062584266,0.00018364532],"domain_scores_gemma":[0.99977964,0.000014236781,0.00006486577,0.00011477911,0.0000018366491,0.000024646615],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000105699975,0.00010899172,0.0001317408,0.00008579963,0.000033015727,0.0000057026245,0.0001071052,0.0002359742,0.00025667],"category_scores_gemma":[0.00001261572,0.000092732225,0.000018602805,0.00015190468,0.000112434864,0.00006270176,0.00011063924,0.00011226628,0.000016318263],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018397568,0.000030655418,0.024784598,0.0000055981327,0.0000014195487,0.000004259514,0.000016102045,0.00008559445,0.9717967,0.00002691368,0.00008303473,0.0031467401],"study_design_scores_gemma":[0.00028988955,0.0000266621,0.06743047,0.000018060106,0.0000015697916,0.0000058744663,0.000023096976,0.00010786258,0.92998254,0.000013350643,0.001988267,0.00011234896],"about_ca_topic_score_codex":0.00013066681,"about_ca_topic_score_gemma":0.00018224794,"teacher_disagreement_score":0.042645868,"about_ca_system_score_codex":0.000025215013,"about_ca_system_score_gemma":0.0000028634201,"threshold_uncertainty_score":0.37815103},"labels":[],"label_agreement":null},{"id":"W2124900105","doi":"10.51847/1sihv8j","title":"10.51847/1siHV8j","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"University of Jordan","keywords":"Phenol; Volume (thermodynamics); Continuous stirred-tank reactor; Bioreactor; Wastewater; Chemistry; Batch reactor; Chemical engineering; Process engineering; Pulp and paper industry; Environmental engineering; Environmental science; Thermodynamics; Organic chemistry; Engineering; Catalysis","score_opus":0.004210316475886052,"score_gpt":0.16035634106400362,"score_spread":0.15614602458811758,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124900105","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.034271102,0.0000026840123,1.3544539e-7,0.0003063419,0.000002246865,0.00009352919,0.000010530822,0.000049679576,0.9652637],"genre_scores_gemma":[0.0048349067,3.188871e-7,0.000112009184,0.00029198575,0.000029047551,0.0000013383105,0.0000072833323,0.000006286548,0.9947168],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99944663,0.000015409063,0.000091023154,0.00015480653,0.00013008396,0.00016203246],"domain_scores_gemma":[0.99973285,0.0000071332793,0.000012914648,0.00013255939,0.0000022651075,0.000112254835],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000073182324,0.000069790935,0.0000602327,0.000011489197,0.000042308315,0.00001690209,0.00013919259,0.000034124958,0.9995945],"category_scores_gemma":[0.000008506816,0.00006109033,0.000023919436,0.00014288958,0.000032627915,0.000059898965,0.00003818159,0.00003304552,0.9985134],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019281637,0.000027584376,0.000010048746,4.3979378e-7,0.0000016171214,0.000001476133,0.000012504004,0.000032921143,0.019686049,7.185457e-8,0.14484572,0.83536226],"study_design_scores_gemma":[0.00009105795,0.00003567145,0.0013889365,0.00000158143,0.0000022056367,0.0000016690437,2.2033e-7,0.000040768547,0.0008851399,5.132034e-7,0.99745727,0.00009496078],"about_ca_topic_score_codex":0.000030712254,"about_ca_topic_score_gemma":8.2630146e-7,"teacher_disagreement_score":0.85261154,"about_ca_system_score_codex":0.0000399165,"about_ca_system_score_gemma":0.0000029823823,"threshold_uncertainty_score":0.24911915},"labels":[],"label_agreement":null},{"id":"W2125349119","doi":"10.1139/s05-015","title":"Impact of compost amendments and operating temperature on diesel fuel bioremediation","year":2006,"lang":"en","type":"article","venue":"Journal of Environmental Engineering and Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Compost; Bioremediation; Amendment; Phenanthrene; Diesel fuel; Mineralization (soil science); Environmental science; Green waste; Mesophile; Chemistry; Pulp and paper industry; Waste management; Environmental chemistry; Contamination; Biology; Bacteria; Ecology; Soil water; Soil science","score_opus":0.0033280932019525257,"score_gpt":0.19363273229744876,"score_spread":0.19030463909549625,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125349119","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996799,0.000060597158,0.000007738627,0.00003174482,0.000062920786,0.00004913055,0.000015476213,0.0000028159136,0.000089671375],"genre_scores_gemma":[0.99918026,0.00008104269,0.0006691422,0.00001783629,0.000025644109,1.6994342e-7,0.0000011942949,0.0000041319245,0.000020607618],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991873,0.000007926526,0.00022606428,0.0001225501,0.0003202729,0.00013587564],"domain_scores_gemma":[0.9997005,0.000017825205,0.000132508,0.000055284254,0.0000040618966,0.00008980545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002494131,0.0000977482,0.00012032151,0.000069925416,0.00006558995,0.000034639663,0.00009605795,0.000029992441,0.00007749617],"category_scores_gemma":[0.000019926938,0.00007000246,0.000029959023,0.0001207444,0.0002328912,0.00025311002,0.00005756665,0.000096387324,0.0000030656065],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000068954505,0.000049686936,0.057846025,0.0000031272743,0.000003226092,0.0000017571683,0.000086025386,0.005804849,0.93595666,0.0000041485428,0.000035950863,0.00020164208],"study_design_scores_gemma":[0.00032789694,0.00030185154,0.9584506,0.000014490184,0.0000082319,0.00002934862,0.000029444598,0.0018911542,0.038810015,0.000004649018,0.000040713225,0.000091563415],"about_ca_topic_score_codex":0.000018641585,"about_ca_topic_score_gemma":9.791438e-7,"teacher_disagreement_score":0.9006046,"about_ca_system_score_codex":0.00013162536,"about_ca_system_score_gemma":0.0000074967766,"threshold_uncertainty_score":0.28546172},"labels":[],"label_agreement":null},{"id":"W2126523906","doi":"10.1080/10889860903127035","title":"A Correlation to Estimate the Bioventing Degradation Rate Constant","year":2009,"lang":"en","type":"article","venue":"Bioremediation Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Biodegradation; Bioremediation; Gasoline; Environmental chemistry; Chemistry; Soil water; Environmental science; Environmental remediation; Environmental engineering; Contamination; Soil science; Ecology; Biology; Organic chemistry","score_opus":0.011739349285626359,"score_gpt":0.26392863747428674,"score_spread":0.2521892881886604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2126523906","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9593884,0.00002415034,0.023505567,0.013423137,0.0009696918,0.00038773072,0.000007575709,0.000057551235,0.0022362499],"genre_scores_gemma":[0.99561983,0.000021656973,0.0019765228,0.001920351,0.00017922343,0.0000012664677,0.00001665973,0.0000058430937,0.00025864976],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987917,0.00010846539,0.00036180377,0.00016002417,0.00034554684,0.00023245496],"domain_scores_gemma":[0.9993566,0.00004280136,0.00027259794,0.00011661613,0.000050562598,0.00016077458],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010099269,0.000114678674,0.000086364744,0.00005925194,0.00035522788,0.00015340712,0.00017589753,0.000054431628,0.0008753723],"category_scores_gemma":[0.00037917818,0.0000763192,0.00004706105,0.00048137174,0.00004508557,0.00028088634,0.000027637103,0.00015651649,0.0008432327],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009435767,0.00011050361,0.06084017,0.0000017619649,0.00001341392,0.000010401528,0.0010635013,0.0052007763,0.7604165,0.0004379163,0.047312025,0.124498665],"study_design_scores_gemma":[0.0012111133,0.00030617145,0.90427774,0.000042682117,0.000047105168,0.0001168479,0.00019297902,0.017419038,0.031794637,0.0012435208,0.042859867,0.00048829283],"about_ca_topic_score_codex":0.0000048414236,"about_ca_topic_score_gemma":0.000025207379,"teacher_disagreement_score":0.84343755,"about_ca_system_score_codex":0.00016084225,"about_ca_system_score_gemma":0.00003067659,"threshold_uncertainty_score":0.99993473},"labels":[],"label_agreement":null},{"id":"W2127218941","doi":"10.7202/705157ar","title":"Enlèvement de la matière organique dans les filtres CAB","year":2005,"lang":"fr","type":"article","venue":"Revue des sciences de l eau","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Chemistry; Molecular biology","score_opus":0.03666880348923142,"score_gpt":0.2856889095487812,"score_spread":0.24902010605954977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127218941","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9414059,0.0013947953,0.0043321797,0.0056083365,0.00026863703,0.00022062726,0.00008258929,0.000052761123,0.046634167],"genre_scores_gemma":[0.93299353,0.0017778361,0.05393523,0.0007054163,0.00028655556,0.000004026281,0.000003930848,0.00001280248,0.010280698],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980826,0.00032079895,0.00028138512,0.00039740672,0.00027490198,0.0006429171],"domain_scores_gemma":[0.9993166,0.00012819443,0.0001221439,0.00018386543,0.000012662693,0.00023657347],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0011946661,0.00019414914,0.0001524473,0.000049543996,0.0006141109,0.00021293112,0.0005959063,0.00018681002,0.009581392],"category_scores_gemma":[0.00013733451,0.00018155838,0.00007473632,0.00050047773,0.0031149345,0.00035277262,0.00016062781,0.00018012327,0.0012745735],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000054085763,0.0002238231,0.10768704,0.00009046187,0.000009895799,0.000037527738,0.013658925,0.0061502676,0.8085512,0.0016646148,0.009543575,0.052377284],"study_design_scores_gemma":[0.0005107457,0.00036146128,0.19008808,0.0004584368,0.00006373483,0.0007097879,0.0027915316,0.046254117,0.41543928,0.001972182,0.34043342,0.00091725274],"about_ca_topic_score_codex":0.0058346777,"about_ca_topic_score_gemma":0.012482469,"teacher_disagreement_score":0.3931119,"about_ca_system_score_codex":0.0013275705,"about_ca_system_score_gemma":0.00013828394,"threshold_uncertainty_score":0.999598},"labels":[],"label_agreement":null},{"id":"W2127521068","doi":"10.5539/ep.v1n2p97","title":"Degradation of Anthracene by Alkaliphilic Bacteria Bacillus badius","year":2012,"lang":"en","type":"article","venue":"Environment and Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Anthracene; Strain (injury); Degradation (telecommunications); Chemistry; Bacterial strain; Bacteria; Microbial biodegradation; Biodegradation; Nuclear chemistry; Environmental chemistry; Food science; Organic chemistry; Biology; Microorganism","score_opus":0.007664652648293468,"score_gpt":0.19141715948129479,"score_spread":0.18375250683300132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127521068","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982649,0.000258163,0.00020941599,0.0002981184,0.000111761045,0.00011088894,0.000050310588,0.000009644059,0.00068678445],"genre_scores_gemma":[0.9979209,0.0005199759,0.00035263025,0.000106361884,0.00003030476,0.0000015927953,0.000064870845,0.000005358276,0.0009980141],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993599,0.000039731443,0.00015256299,0.00012473916,0.00014614685,0.00017688617],"domain_scores_gemma":[0.9997183,0.0000056044937,0.00008663662,0.0000952572,7.0981065e-7,0.00009346725],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016867962,0.00009130717,0.00008359661,0.000015722419,0.000058386744,0.000006007015,0.00004475237,0.00006192048,0.005287365],"category_scores_gemma":[0.0000046127734,0.00008091117,0.000021817212,0.000049087354,0.00013118789,0.00022521299,0.000049835668,0.000035480425,0.0003142655],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010734027,0.00006768202,0.056784753,0.0000024128183,0.0000037080297,4.552211e-8,0.000121651115,0.0000027633444,0.9272815,0.000017897235,0.0024356882,0.013271168],"study_design_scores_gemma":[0.00037447503,0.000060239785,0.59710467,0.0000042386278,0.00001790726,0.000003203015,0.000040608636,0.000052498835,0.28076628,0.000012601709,0.121389955,0.0001733138],"about_ca_topic_score_codex":0.000045882243,"about_ca_topic_score_gemma":0.0000034357306,"teacher_disagreement_score":0.64651525,"about_ca_system_score_codex":0.00007133854,"about_ca_system_score_gemma":0.0000013146275,"threshold_uncertainty_score":0.9956219},"labels":[],"label_agreement":null},{"id":"W2129323832","doi":"10.1128/aem.70.1.363-369.2004","title":"Saturable, Energy-Dependent Uptake of Phenanthrene in Aqueous Phase by <i>Mycobacterium</i> sp. Strain RJGII-135","year":2004,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Phenanthrene; Chemistry; Saturation (graph theory); Biophysics; Cyanide; Aqueous two-phase system; Kinetics; Efflux; Strain (injury); Nuclear chemistry; Biochemistry; Aqueous solution; Chromatography; Biology; Environmental chemistry; Inorganic chemistry; Organic chemistry","score_opus":0.0033795265725006206,"score_gpt":0.17698181850557196,"score_spread":0.17360229193307133,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129323832","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99721205,0.00033225023,0.000056694415,0.00008348268,0.00008873635,0.00019685412,0.0012410895,0.000015852376,0.00077299244],"genre_scores_gemma":[0.9973006,0.00091740355,0.00025020965,0.000556091,0.00001656797,0.0000066999714,0.0008630118,0.000017392771,0.000072003546],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985884,0.000027503234,0.00042324638,0.0004859001,0.00007861005,0.0003963354],"domain_scores_gemma":[0.9995524,0.000013285271,0.00014541301,0.00018028953,7.3903925e-7,0.00010784055],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012297256,0.00025646156,0.00029695014,0.000036466896,0.000058734047,0.000009565055,0.00017569616,0.00020482199,0.0010437907],"category_scores_gemma":[0.0000018222911,0.00022848879,0.00004333915,0.000085366235,0.0004210443,0.0000630335,0.0001751125,0.00013312907,0.00009161651],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007630624,0.0004686015,0.0011691467,0.000004646902,0.000010847278,0.000005546201,0.0002075218,0.00003808913,0.9810412,0.000045612036,0.00019752096,0.01673494],"study_design_scores_gemma":[0.005897062,0.00029829578,0.003747586,0.0000137283005,0.000024439838,0.0000649648,0.0005934766,0.0000050556396,0.96972084,0.00027501065,0.018861996,0.0004975176],"about_ca_topic_score_codex":0.00034084189,"about_ca_topic_score_gemma":0.00023145213,"teacher_disagreement_score":0.018664474,"about_ca_system_score_codex":0.00017325381,"about_ca_system_score_gemma":0.000008373531,"threshold_uncertainty_score":0.9998694},"labels":[],"label_agreement":null},{"id":"W2129502363","doi":"10.1002/cjce.20688","title":"Removal efficiency of heavy oil by free and immobilised microorganisms on laboratory‐scale","year":2011,"lang":"en","type":"article","venue":"The Canadian Journal of Chemical Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Biodegradation; Microorganism; Bacillus cereus; Chemistry; Salinity; Degradation (telecommunications); Bacterial growth; Bioremediation; Oil field; Bacteria; Pulp and paper industry; Biology; Organic chemistry; Ecology","score_opus":0.004349921634677832,"score_gpt":0.14859227638777303,"score_spread":0.1442423547530952,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129502363","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99919516,0.00008845676,0.000010310249,0.00018768077,0.00008327494,0.000020227677,0.000025839116,0.0000031201027,0.0003859216],"genre_scores_gemma":[0.9993417,0.0000039660454,0.00049397553,0.00011003289,0.000020416233,1.2218906e-7,4.808025e-7,0.0000075711473,0.00002169012],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99945617,0.00000956071,0.00019050277,0.0000695623,0.000117892785,0.00015628639],"domain_scores_gemma":[0.9995263,0.00001981934,0.000076132834,0.00011327688,0.000015005738,0.00024945702],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019491614,0.00007663399,0.000107539374,0.000026482834,0.000027400494,0.000009483829,0.00025550456,0.00005211486,0.00034088155],"category_scores_gemma":[0.000081764934,0.00005505936,0.000028585231,0.00012617011,0.00012975698,0.000042251457,0.000019756792,0.00014380987,0.0000075872827],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000094843635,0.000009596811,0.000279882,0.0000040696464,0.0000038834096,0.000006322488,0.00036015073,0.000020394846,0.99793106,0.0000062725803,0.001159305,0.00020956612],"study_design_scores_gemma":[0.00021597405,0.0000376917,0.00048955285,0.00001931559,0.000006667828,0.000034234847,0.000012099095,0.00006278668,0.99798715,0.000010293254,0.0010541535,0.00007009072],"about_ca_topic_score_codex":0.00066728855,"about_ca_topic_score_gemma":0.00017284714,"teacher_disagreement_score":0.0004944414,"about_ca_system_score_codex":0.0000935709,"about_ca_system_score_gemma":0.00004658501,"threshold_uncertainty_score":0.37324142},"labels":[],"label_agreement":null},{"id":"W2130086189","doi":"10.1002/etc.5620211007","title":"Aerobic degradation of ethyl-<i>tert</i>-butyl ether by a microbial consortium: Selection and evaluation of biodegradation ability","year":2002,"lang":"en","type":"article","venue":"Environmental Toxicology and Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Polytechnique Montréal","funders":"","keywords":"Biodegradation; Degradation (telecommunications); Microbial consortium; Ether; Environmental chemistry; Chemistry; Selection (genetic algorithm); Environmental science; Organic chemistry; Biology; Engineering; Bacteria; Microorganism; Computer science","score_opus":0.011652866282939602,"score_gpt":0.213739756292186,"score_spread":0.2020868900092464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130086189","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989961,0.00019695285,0.000018283972,0.00010413567,0.000025849247,0.00018333898,0.000048472302,0.0000071388063,0.00041972054],"genre_scores_gemma":[0.99923766,0.00017245441,0.00021060361,0.000056130844,0.000007851527,0.0000054725365,0.00006470338,0.0000053774706,0.00023977109],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990813,0.000091867245,0.00026231725,0.00026609062,0.00018264189,0.00011579406],"domain_scores_gemma":[0.99963474,0.000030606694,0.00018948899,0.00009072733,0.0000046575387,0.00004979992],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000310335,0.00011464679,0.00013550192,0.000010830224,0.00005759253,0.0000046828945,0.000051700095,0.00018684524,0.0066298186],"category_scores_gemma":[0.000022581475,0.00011386542,0.00002503275,0.000058308695,0.00042695864,0.00009315879,0.00004915709,0.0000899011,0.000013104163],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002020555,0.00018832598,0.050732818,0.000013724843,0.000009461009,5.927027e-8,0.00010982883,0.000008994696,0.942637,4.9501205e-7,0.00058872293,0.005690362],"study_design_scores_gemma":[0.0006883288,0.000057826557,0.045196757,0.0000045808442,0.000043061817,0.000009905798,0.000059708782,0.00090115267,0.9525738,0.000023307768,0.00033649095,0.00010511346],"about_ca_topic_score_codex":0.000020982812,"about_ca_topic_score_gemma":0.000013420106,"teacher_disagreement_score":0.009936764,"about_ca_system_score_codex":0.000114599534,"about_ca_system_score_gemma":0.0000043081423,"threshold_uncertainty_score":0.99427825},"labels":[],"label_agreement":null},{"id":"W2130302711","doi":"10.1128/mmbr.67.4.503-549.2003","title":"Recent Advances in Petroleum Microbiology","year":2003,"lang":"en","type":"review","venue":"Microbiology and Molecular Biology Reviews","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1466,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo; University of Guelph","funders":"","keywords":"Petroleum; Microbial enhanced oil recovery; Hydrocarbon; Diesel fuel; Gasoline; Bioremediation; Biodegradation; Environmental science; Microbial consortium; Microorganism; Environmental chemistry; Biochemical engineering; Chemistry; Biology; Contamination; Bacteria; Ecology; Organic chemistry","score_opus":0.01868063958459894,"score_gpt":0.3000257799072764,"score_spread":0.2813451403226775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130302711","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007446614,0.99655616,0.000052145337,0.00005817877,0.00052466185,0.0012115517,0.00015007271,0.00002108048,0.0013516794],"genre_scores_gemma":[0.0000031990076,0.99689794,0.00051272445,0.0012432375,0.000024103425,0.000083518986,0.00094264996,0.00003388444,0.00025875555],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9946885,0.0020536708,0.0012528511,0.0012374972,0.000020258269,0.0007472153],"domain_scores_gemma":[0.99868786,0.00007583283,0.00062873255,0.00047546567,0.000009274254,0.00012285692],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000968427,0.0007661536,0.00259371,0.00016795372,0.00008079717,0.000011677105,0.00047621242,0.0012854261,0.0018115973],"category_scores_gemma":[0.000107179476,0.00054646615,0.0003605799,0.0003993059,0.0007794871,0.000053832457,0.00034380812,0.0006592962,0.0016995037],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006775727,0.0000671224,0.00017212941,0.000719731,0.000030221983,0.000020720487,0.000010365475,1.6314932e-7,0.031798407,0.00006267675,0.0019380037,0.96517366],"study_design_scores_gemma":[0.00026565295,0.00009516368,0.0000011647346,0.0006344287,0.00012286326,0.00046477723,0.000001632607,8.444191e-8,0.00012505527,0.000039007216,0.9976804,0.0005697662],"about_ca_topic_score_codex":0.0000039182805,"about_ca_topic_score_gemma":0.00013475008,"teacher_disagreement_score":0.9957424,"about_ca_system_score_codex":0.00017038986,"about_ca_system_score_gemma":0.000052190033,"threshold_uncertainty_score":0.9996987},"labels":[],"label_agreement":null},{"id":"W2130710255","doi":"10.1128/aem.70.2.1123-1128.2004","title":"Biodegradation of the Hexahydro-1,3,5-Trinitro-1,3,5-Triazine Ring Cleavage Product 4-Nitro-2,4-Diazabutanal by <i>Phanerochaete chrysosporium</i>","year":2004,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Strategic Environmental Research and Development Program","keywords":"Phanerochaete; Biodegradation; Chrysosporium; Chemistry; Triazine; Nuclear chemistry; Lignin peroxidase; Nitrite; Nitro compound; Environmental chemistry; Nitro; Organic chemistry; Lignin; Laccase; Enzyme; Nitrate","score_opus":0.002677069200179183,"score_gpt":0.15087085092514096,"score_spread":0.14819378172496178,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130710255","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997614,0.00015507815,0.00004495258,0.0003635448,0.00015658942,0.00042044476,0.00031749098,0.00002507224,0.00090281555],"genre_scores_gemma":[0.99847615,0.00018862495,0.00028305026,0.0005912521,0.00004537019,0.000008084662,0.00024035266,0.000019290314,0.00014782626],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998567,0.00004303406,0.0003832737,0.0005209915,0.00012328915,0.0003624081],"domain_scores_gemma":[0.99936736,0.00001974042,0.0002239155,0.00029800233,0.000001572745,0.000089401394],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017065082,0.0002642346,0.000260457,0.000028726708,0.00016957326,0.000012020881,0.00028277264,0.00013573647,0.00042260787],"category_scores_gemma":[0.000006827294,0.00019659432,0.00006726023,0.00015708694,0.0007281973,0.000080661375,0.00033646254,0.00018823997,0.0001579887],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003866958,0.00012348106,0.010071769,0.0000066251737,0.000017290631,7.099625e-7,0.00010992055,0.000035105702,0.98771304,0.000029176977,0.00059805944,0.0012561477],"study_design_scores_gemma":[0.001215519,0.00006257168,0.014400297,0.0000069171265,0.000028615748,0.000036512683,0.00006611468,0.000003017913,0.9757249,0.000088978704,0.008113606,0.00025296782],"about_ca_topic_score_codex":0.00008885914,"about_ca_topic_score_gemma":0.00003832703,"teacher_disagreement_score":0.011988162,"about_ca_system_score_codex":0.00015880865,"about_ca_system_score_gemma":0.000009460996,"threshold_uncertainty_score":0.8016884},"labels":[],"label_agreement":null},{"id":"W2131600989","doi":"10.1016/j.jconhyd.2013.07.008","title":"Multiple lines of evidence to demonstrate vinyl chloride aerobic biodegradation in the vadose zone, and factors controlling rates","year":2013,"lang":"en","type":"article","venue":"Journal of Contaminant Hydrology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"University of Waterloo; Commonwealth Scientific and Industrial Research Organisation","keywords":"Vadose zone; Environmental chemistry; Biodegradation; Groundwater; Chemistry; Water table; Plume; Soil water; Vinyl chloride; Soil gas; Environmental science; Soil science; Geology","score_opus":0.03306960074122852,"score_gpt":0.2581678270322777,"score_spread":0.22509822629104917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131600989","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99713993,0.000109944565,0.00034050865,0.002006664,0.00013344071,0.0002547305,0.0000021657438,0.0000020400526,0.000010579239],"genre_scores_gemma":[0.99908984,0.00021400822,0.00029446458,0.00034677712,0.000027066855,0.0000019392505,7.958138e-7,0.0000036075119,0.000021505264],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988691,0.00014489092,0.0005253072,0.000115610164,0.00017275654,0.00017233661],"domain_scores_gemma":[0.9989219,0.00048846146,0.0003979948,0.000085614476,0.000039560993,0.00006648989],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007418051,0.00010614469,0.00026150566,0.00008298139,0.000040646977,0.000024124181,0.00022299276,0.0000697655,0.00011447628],"category_scores_gemma":[0.00034632202,0.000056009638,0.000044248398,0.00016529838,0.00012385263,0.00029297685,0.00003967432,0.00013172583,0.000020737452],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009958479,0.00003630321,0.40957153,0.0000034012812,0.000006393393,0.000004721494,0.00052913866,0.00016055242,0.58698475,0.0000022323177,0.00008067737,0.0025207426],"study_design_scores_gemma":[0.00090485945,0.00055105146,0.84262323,0.000060040795,0.000022840886,0.000048996244,0.0003992093,0.0027663426,0.1519736,0.00003637518,0.00050377985,0.00010968306],"about_ca_topic_score_codex":0.00060116895,"about_ca_topic_score_gemma":0.0011147561,"teacher_disagreement_score":0.43501112,"about_ca_system_score_codex":0.000031269672,"about_ca_system_score_gemma":0.000016488568,"threshold_uncertainty_score":0.22840066},"labels":[],"label_agreement":null},{"id":"W2132922200","doi":"10.1016/j.ibiod.2012.04.009","title":"Anaerobic biodegradation of crude oil under sulphate-reducing conditions leads to only modest enrichment of recognized sulphate-reducing taxa","year":2012,"lang":"en","type":"article","venue":"International Biodeterioration & Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":138,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Microcosm; Firmicutes; Desulfovibrio; Proteobacteria; Deltaproteobacteria; Gammaproteobacteria; Biology; Environmental chemistry; Microbiology; Chemistry; 16S ribosomal RNA; Ecology; Bacteria","score_opus":0.0226965000196451,"score_gpt":0.27438977456185737,"score_spread":0.25169327454221224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2132922200","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9910389,0.000052433308,0.004619008,0.0013333559,0.0012381462,0.0003759382,0.0005852389,0.00007256084,0.0006844001],"genre_scores_gemma":[0.9884989,0.00010438791,0.008286486,0.00031858956,0.00013649081,0.000028966948,0.002025561,0.000027879381,0.0005727146],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968469,0.00016311105,0.0011953337,0.0005362701,0.0008421228,0.00041626964],"domain_scores_gemma":[0.99815285,0.00008180167,0.00091809424,0.00036839108,0.00025096527,0.00022787991],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00071334187,0.00034570438,0.00035841568,0.00042788015,0.00016296592,0.00008917924,0.0004024683,0.00019260633,0.0020609302],"category_scores_gemma":[0.00017820772,0.00033961717,0.00015473159,0.0007932224,0.00019245375,0.0014239392,0.00015316745,0.00013573423,0.00043608784],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000119261276,0.00036515997,0.016479563,0.000018818115,0.000043573913,2.697158e-7,0.0005853718,0.0010862567,0.96544075,0.0003342895,0.0009492852,0.014577388],"study_design_scores_gemma":[0.0010270021,0.00018332234,0.08356149,0.00012528861,0.000067041525,0.0000109288,0.0002599632,0.001571009,0.9103343,0.00006193664,0.0022997002,0.0004980554],"about_ca_topic_score_codex":0.0011038971,"about_ca_topic_score_gemma":0.0002935574,"teacher_disagreement_score":0.06708192,"about_ca_system_score_codex":0.00056110526,"about_ca_system_score_gemma":0.00008680408,"threshold_uncertainty_score":0.9999056},"labels":[],"label_agreement":null},{"id":"W2134349197","doi":"10.1139/w08-141","title":"Molecular and biochemical characterization of Iranian surfactin-producing<i>Bacillus subtilis</i>isolates and evaluation of their biocontrol potential against<i>Aspergillus flavus</i>and<i>Colletotrichum gloeosporioides</i>","year":2009,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Surfactin; Aspergillus flavus; Biology; Microbiology; Bacillus subtilis; Agar plate; Bacillus amyloliquefaciens; Bacteria; Food science","score_opus":0.005900162097380407,"score_gpt":0.18694906088379265,"score_spread":0.18104889878641225,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134349197","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978496,0.00094212976,0.000020317397,0.0006060671,0.00015790985,0.00024481295,0.00014536984,0.0000026290936,0.0000311548],"genre_scores_gemma":[0.9992312,0.00022147574,0.00011320311,0.00035527773,0.000029850205,3.1921482e-7,0.000035426037,0.000007623897,0.000005627455],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99876016,0.00015671445,0.00052488706,0.00023754103,0.00007985196,0.00024083165],"domain_scores_gemma":[0.9990037,0.000021621974,0.00047232283,0.00011758349,0.00013948744,0.00024526427],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006771605,0.0001665833,0.00034896567,0.00014270892,0.00006725603,0.000017414368,0.00012623279,0.00017062618,0.00010171668],"category_scores_gemma":[0.000107102926,0.0001407276,0.00006686592,0.00017845684,0.00033483838,0.00010645771,0.000023795017,0.00013103284,0.0000013875114],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005030045,0.000017703049,0.0058852085,0.000008081274,0.000027853786,0.0000048371426,0.00039873034,0.000024128209,0.98750454,0.00000223584,0.000079256315,0.0059971446],"study_design_scores_gemma":[0.0017458593,0.00032525536,0.08914291,0.000043383432,0.00010997287,0.0002610609,0.00009641135,0.00021078937,0.90691185,0.00004712292,0.00089039415,0.00021495817],"about_ca_topic_score_codex":0.000421007,"about_ca_topic_score_gemma":0.00055025093,"teacher_disagreement_score":0.083257705,"about_ca_system_score_codex":0.00009469889,"about_ca_system_score_gemma":0.0001591496,"threshold_uncertainty_score":0.5738705},"labels":[],"label_agreement":null},{"id":"W2134761464","doi":"10.1128/jb.01675-05","title":"Metabolism of Isovanillate, Vanillate, and Veratrate by <i>Comamonas testosteroni</i> Strain BR6020","year":2006,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada; Deutsche Forschungsgemeinschaft; Alexander von Humboldt-Stiftung","keywords":"Comamonas testosteroni; Oxygenase; Biology; Biochemistry; NAD+ kinase; Metabolism; Enzyme; Demethylation; Oxidoreductase; Molecular biology; Stereochemistry; Gene; Gene expression; Chemistry","score_opus":0.003996215546941591,"score_gpt":0.18492025412888669,"score_spread":0.18092403858194508,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134761464","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99820846,0.00024258757,0.000026372241,0.00027161886,0.00020901884,0.00005866015,0.00006236726,0.000004494262,0.00091641635],"genre_scores_gemma":[0.99879336,0.00014683932,0.0005701059,0.00025791375,0.00006619062,1.4236291e-7,0.0000069430985,0.000007806298,0.00015070496],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989728,0.00008237942,0.0005266548,0.00012638954,0.000115888004,0.00017593477],"domain_scores_gemma":[0.9993068,0.000037039914,0.00047935193,0.00007974077,0.000023456878,0.00007363517],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024414784,0.000121534926,0.0003109278,0.0000363986,0.000031968822,0.000014852708,0.0001313919,0.00010678064,0.00059915404],"category_scores_gemma":[0.00001601093,0.000092664755,0.000058162663,0.00008023707,0.00019941686,0.00015796046,0.000056594152,0.00012330289,0.00002054529],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043485798,0.00003657852,0.02331741,0.0000035125183,0.000012403791,0.000006351885,0.000036553934,0.0000123092095,0.9706489,0.000016798636,0.0043899543,0.0014757669],"study_design_scores_gemma":[0.0015060415,0.00050726486,0.82012856,0.000014829425,0.00004411849,0.00039283987,0.0000313335,0.000024168692,0.099003725,0.00046524854,0.07763074,0.00025115177],"about_ca_topic_score_codex":0.00008458717,"about_ca_topic_score_gemma":0.000039765968,"teacher_disagreement_score":0.87164515,"about_ca_system_score_codex":0.000029596198,"about_ca_system_score_gemma":0.00001560314,"threshold_uncertainty_score":0.6560316},"labels":[],"label_agreement":null},{"id":"W2135150658","doi":"10.1128/jb.01950-06","title":"Characterization of a C—C Bond Hydrolase from<i>Sphingomonas wittichii</i>RW1 with Novel Specificities towards Polychlorinated Biphenyl Metabolites","year":2007,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Université Laval; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biphenyl; Biology; Stereochemistry; Dibenzofuran; Enzyme; Hydrolysis; Hydrolase; Biochemistry; Rhodococcus rhodochrous; Sphingomonas; Cleavage (geology); Burkholderia; Chemistry; Rhodococcus; Organic chemistry; Bacteria; Gene","score_opus":0.010898088905913327,"score_gpt":0.21018687151931306,"score_spread":0.19928878261339975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135150658","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977755,0.00002860185,0.00093096716,0.0002476652,0.0003752232,0.00008931968,0.000102247584,0.000009076474,0.0004414335],"genre_scores_gemma":[0.99708545,0.00006647448,0.0022729028,0.00027123516,0.00016906991,3.0876413e-7,0.000036528447,0.000012970779,0.000085035776],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986981,0.000036952068,0.0006204692,0.00016365871,0.0002414375,0.00023933998],"domain_scores_gemma":[0.998762,0.000057134577,0.0008670707,0.00013380176,0.000054551907,0.00012541683],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047436936,0.00016335472,0.00039366016,0.0001141768,0.0000398564,0.00001857521,0.00021534422,0.00011056473,0.000859221],"category_scores_gemma":[0.000047869013,0.00011523295,0.00007855329,0.00023249967,0.00024803838,0.00028383275,0.000059208483,0.00017217705,0.000016561038],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006235099,0.00012378866,0.038027428,0.000003939079,0.000048111127,0.000014643027,0.00039987572,0.0000036417373,0.959539,0.000021342807,0.000026541673,0.0011681902],"study_design_scores_gemma":[0.00064841314,0.00027814799,0.48427084,0.000017642978,0.000030483541,0.000060064747,0.000073364645,0.000008332267,0.50756514,0.000018130217,0.0069257426,0.00010372725],"about_ca_topic_score_codex":0.00014600606,"about_ca_topic_score_gemma":0.000061899744,"teacher_disagreement_score":0.4519739,"about_ca_system_score_codex":0.00006685728,"about_ca_system_score_gemma":0.000033263343,"threshold_uncertainty_score":0.9407867},"labels":[],"label_agreement":null},{"id":"W2135433905","doi":"10.1080/009083190925392","title":"Thermobioremediation of Soil Contaminated with Used Motor Oil","year":2006,"lang":"en","type":"article","venue":"Energy Sources Part A Recovery Utilization and Environmental Effects","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Chemistry; Mesophile; Hydrocarbon; Total petroleum hydrocarbon; Biodegradation; Nitrogen; Moisture; Water content; Kjeldahl method; Environmental chemistry; Limiting; Soil contamination; Animal science; Soil water; Environmental science; Soil science","score_opus":0.004159164673612718,"score_gpt":0.16023862673643616,"score_spread":0.15607946206282344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135433905","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99724317,0.00023693283,0.00026079384,0.0000151904005,0.00009133487,0.0000922515,0.000030268198,0.000034077388,0.0019960012],"genre_scores_gemma":[0.99762934,0.00033501818,0.000069903115,0.00012155147,0.000037098416,0.000011399305,0.00037210502,0.000019553978,0.0014040009],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989364,0.00008774933,0.00022935505,0.00029172807,0.00026771709,0.00018705483],"domain_scores_gemma":[0.9995563,0.000054446315,0.00018480365,0.0001309122,0.0000030957913,0.000070446746],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007432331,0.00018880625,0.00017870612,0.000044456912,0.00009434466,0.000020838705,0.00007316307,0.000101776306,0.00052987615],"category_scores_gemma":[0.0000067833607,0.00015372575,0.00004245208,0.00012826984,0.00023894709,0.00017040774,0.000052535554,0.000042785727,0.000028229379],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026971902,0.0003380755,0.17725368,0.0000631249,0.000034377867,0.000005842182,0.00051690487,0.0031145774,0.760961,0.00005689121,0.00046608993,0.056919735],"study_design_scores_gemma":[0.0027340066,0.00076340063,0.29715428,0.000073849806,0.000073582036,0.00000912836,0.00034950915,0.0035575766,0.66231316,0.000032588974,0.032360513,0.0005783802],"about_ca_topic_score_codex":0.00027932282,"about_ca_topic_score_gemma":0.00043711433,"teacher_disagreement_score":0.119900614,"about_ca_system_score_codex":0.000091810754,"about_ca_system_score_gemma":0.0000054165503,"threshold_uncertainty_score":0.6268754},"labels":[],"label_agreement":null},{"id":"W2135683575","doi":"10.7202/000379ar","title":"Phytoremediation of hydrocarbon-contaminated soils with emphasis on the effect of petroleum hydrocarbons on the growth of plant species","year":2009,"lang":"en","type":"article","venue":"Phytoprotection","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Phytoremediation; Environmental remediation; Petroleum; Soil contamination; Environmental science; Soil water; Contamination; Hydrocarbon; Total petroleum hydrocarbon; Sorghum; Bioremediation; Environmental chemistry; Agronomy; Chemistry; Biology; Soil science; Ecology","score_opus":0.006500137028712403,"score_gpt":0.18005225709883224,"score_spread":0.17355212007011983,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135683575","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952539,0.0000052248215,0.000049957118,0.0006246156,0.00007043313,0.0005619659,0.00002048031,0.000016962469,0.003396444],"genre_scores_gemma":[0.99980307,0.000013072155,0.00000703143,0.00007722365,0.000035762594,0.000014095731,0.000006435813,0.0000066464345,0.00003668612],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988482,0.00015883002,0.00024275409,0.00018052476,0.0004304369,0.0001392314],"domain_scores_gemma":[0.99922746,0.00016429572,0.00034570094,0.00022682967,0.000011281437,0.00002439935],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004327363,0.00014829768,0.00019770622,0.000053344604,0.00007308921,0.00000636877,0.00015926477,0.000059361955,0.0000936872],"category_scores_gemma":[0.00009838035,0.000073278905,0.00007252983,0.000328492,0.00015821436,0.000054634253,0.000014475001,0.00013380358,0.000013052866],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005588765,0.00009991588,0.007552286,0.000012832377,0.00002163748,4.548694e-7,0.00019998278,0.0001253438,0.98963493,0.00011346524,0.00016558991,0.0015146969],"study_design_scores_gemma":[0.00037157597,0.002061706,0.12976831,0.000050550894,0.0000194713,0.0000012548977,0.000026137439,0.000563044,0.8669539,0.00007236512,0.000039932995,0.00007173111],"about_ca_topic_score_codex":0.00014730837,"about_ca_topic_score_gemma":0.00006995673,"teacher_disagreement_score":0.122681,"about_ca_system_score_codex":0.00007309653,"about_ca_system_score_gemma":0.00000661789,"threshold_uncertainty_score":0.2988227},"labels":[],"label_agreement":null},{"id":"W2135738695","doi":"10.1016/j.marenvres.2003.07.001","title":"Crude oil bioremediation in sub-Antarctic intertidal sediments: chemistry and toxicity of oiled residues","year":2004,"lang":"en","type":"article","venue":"Marine Environmental Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":110,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Rimouski","funders":"Polar Knowledge Canada","keywords":"Bioremediation; Environmental chemistry; Chemistry; Intertidal zone; Environmental remediation; Acute toxicity; Phosphorus; Compost; Seawater; Toxicity; Hydrocarbon; Biostimulation; Contamination; Agronomy; Ecology; Biology; Organic chemistry","score_opus":0.013508221094060904,"score_gpt":0.25897858072030466,"score_spread":0.24547035962624375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135738695","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969693,0.00002944296,0.0000022049214,0.00033609895,0.000028761007,0.0001285382,0.000021543376,0.000009698551,0.0024744147],"genre_scores_gemma":[0.9985585,0.00060353096,0.00022016236,0.000044620392,0.000024686493,0.000009486833,0.00005471089,0.000012485121,0.00047180903],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981558,0.000089350746,0.0003225176,0.00037966325,0.00068034464,0.00037236288],"domain_scores_gemma":[0.9995237,0.000057128025,0.00006868674,0.00020855594,0.0000037826926,0.00013813641],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006827274,0.00013941061,0.00015808249,0.000057783585,0.0000683895,0.000020592925,0.00021101681,0.00010065199,0.0030313178],"category_scores_gemma":[0.00010547097,0.00013133172,0.000031834625,0.00023731685,0.00056335673,0.00017090744,0.00079094217,0.00027767345,0.00022463138],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000067993715,0.00023599046,0.3221651,0.000019188394,0.000003955424,0.0000070468186,0.00015005867,0.00002035647,0.6696873,7.699265e-7,0.00004427191,0.007597998],"study_design_scores_gemma":[0.0007513291,0.00006668383,0.3915912,0.000017326554,0.0000022038018,0.0000031912698,0.000091638394,0.00002984473,0.6070284,0.00007878796,0.00024626715,0.00009310018],"about_ca_topic_score_codex":0.0007712678,"about_ca_topic_score_gemma":0.0007415979,"teacher_disagreement_score":0.069426104,"about_ca_system_score_codex":0.0007043698,"about_ca_system_score_gemma":0.000018648074,"threshold_uncertainty_score":0.99788004},"labels":[],"label_agreement":null},{"id":"W2135746737","doi":"10.1111/j.1574-6941.2010.00845.x","title":"Tetrachloroethene conversion to ethene by a<i>Dehalococcoides</i>-containing enrichment culture from Bitterfeld","year":2010,"lang":"en","type":"article","venue":"FEMS Microbiology Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Helmholtz-Zentrum für Umweltforschung; European Commission; McMaster University","keywords":"Dehalococcoides; Reductive dechlorination; Enrichment culture; Vinyl chloride; Electron donor; Electron acceptor; Microcosm; Dehalogenase; Temperature gradient gel electrophoresis; Microbiology; Chemistry; Biology; Bacteria; Environmental chemistry; Photochemistry; Biodegradation; Organic chemistry; Catalysis; Halogenation","score_opus":0.004297206012410156,"score_gpt":0.20391312161537758,"score_spread":0.19961591560296743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135746737","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993363,0.00002799983,0.000058343754,0.0025531973,0.001950236,0.00042062,0.00030127694,0.000084965235,0.0012403517],"genre_scores_gemma":[0.9858055,0.000019354804,0.0015911793,0.010437857,0.00012761247,0.000016134782,0.00039007477,0.000020299069,0.0015920035],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981155,0.00012711527,0.0003693674,0.00072028465,0.00006575396,0.0006019874],"domain_scores_gemma":[0.9991351,0.000113576534,0.00016378003,0.00034414214,0.000020168427,0.00022325755],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00030794536,0.00029006964,0.00033597305,0.000054346547,0.00018762292,0.000022971331,0.00049390143,0.00063800917,0.020479947],"category_scores_gemma":[0.00008134729,0.00024542876,0.00007914917,0.00018198858,0.00038633693,0.0000822009,0.0003603124,0.00054228574,0.007520797],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006014236,0.00009029076,0.05535792,9.1601925e-7,0.000019103261,0.0000065390705,0.0005144226,0.0000035009687,0.8174631,0.0000048489005,0.1257803,0.0006988962],"study_design_scores_gemma":[0.0008056954,0.00036474972,0.025638724,0.0000032927815,0.000018617628,0.000027768961,0.000118388925,0.000007382287,0.53843933,0.00003754927,0.43417665,0.00036183983],"about_ca_topic_score_codex":0.00051479193,"about_ca_topic_score_gemma":0.002172952,"teacher_disagreement_score":0.30839634,"about_ca_system_score_codex":0.0001444734,"about_ca_system_score_gemma":0.000019708596,"threshold_uncertainty_score":0.9999998},"labels":[],"label_agreement":null},{"id":"W2135863181","doi":"10.1111/j.1574-6941.2002.tb00932.x","title":"Bacterial growth and biofilm production on pyrene","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Pyrene; Biology; Phenanthrene; Biofilm; Sphingomonas; Ribosomal Intergenic Spacer analysis; Microbiology; Pseudomonas; Phylotype; Alcaligenes; Chrysosporium; Library; 16S ribosomal RNA; Bacteria; Ribosomal RNA; Botany; Biochemistry; Gene; Internal transcribed spacer","score_opus":0.009892013075216014,"score_gpt":0.18429243060432116,"score_spread":0.17440041752910515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135863181","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99350023,0.000014043894,8.199229e-7,0.0022143668,0.0015123136,0.00019209746,0.000026670696,0.0000446704,0.0024947792],"genre_scores_gemma":[0.99726963,0.00011042443,0.00016067822,0.0010946648,0.00015044116,0.000004942174,0.000046352296,0.0000087135995,0.0011541474],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99897957,0.00009752771,0.00017874489,0.00042378635,0.000024119707,0.00029627958],"domain_scores_gemma":[0.9996878,0.000031759777,0.000083089035,0.00013129476,0.0000057251145,0.0000603533],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00010653294,0.00014043163,0.00016085865,0.000046241672,0.00010901029,0.000009340234,0.00011207849,0.0002266641,0.010873837],"category_scores_gemma":[0.00007404009,0.00011875825,0.00002633427,0.00010313941,0.00038332568,0.000054529763,0.00010013188,0.000116796415,0.0029002845],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026243995,0.00008341814,0.034328617,0.0000016177652,0.000007219738,0.0000027567314,0.000067610825,0.0000010230345,0.9317488,0.000018269477,0.032939985,0.0007744541],"study_design_scores_gemma":[0.0014089216,0.0010138339,0.25165105,0.0000064439873,0.00002297513,0.000291751,0.000026913058,0.000021377065,0.6348796,0.00010320369,0.11001396,0.0005599684],"about_ca_topic_score_codex":0.000023397868,"about_ca_topic_score_gemma":0.00021342977,"teacher_disagreement_score":0.2968692,"about_ca_system_score_codex":0.000054363973,"about_ca_system_score_gemma":0.000002819722,"threshold_uncertainty_score":0.99787605},"labels":[],"label_agreement":null},{"id":"W2136146855","doi":"10.5539/esr.v1n2p43","title":"Mathematical Model to Predict Conductive Properties of Contaminated Riverbed Sand in Ado-Odo Ota Local Government Area of Ogun State, Nigeria","year":2012,"lang":"en","type":"article","venue":"Earth Science Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Contamination; Hydraulic conductivity; Caustic (mathematics); Thermal conductivity; Environmental science; Hydrology (agriculture); Diesel fuel; Current (fluid); Environmental engineering; Soil science; Geotechnical engineering; Geology; Materials science; Waste management; Soil water; Physics; Composite material; Engineering","score_opus":0.0718596533827897,"score_gpt":0.3078083804975534,"score_spread":0.23594872711476367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2136146855","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99633235,0.000015305237,0.0005981834,0.000074843956,0.00002898518,0.0005577015,0.00004246551,0.000005777786,0.0023444116],"genre_scores_gemma":[0.99858886,0.000009610118,0.00088664115,0.000018124972,0.0000038217413,0.000008051123,6.733166e-7,0.0000049642513,0.00047924172],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996801,0.00011619552,0.000319882,0.00027989564,0.0018549435,0.0006280757],"domain_scores_gemma":[0.9992906,0.000051334166,0.00006496842,0.00023162932,0.00008009059,0.00028137377],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030290487,0.00009788269,0.00019413816,0.00009653027,0.00008891367,0.000021143478,0.00042167955,0.00004461952,0.0006805243],"category_scores_gemma":[0.0003995177,0.00007100008,0.000023451925,0.0009762211,0.0023782603,0.00041736604,0.00044128226,0.0001585987,0.00013916632],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009470599,0.00022630495,0.04794656,0.000016740209,0.0000022701217,7.341989e-7,0.0033120182,0.00052589603,0.9467566,0.000024939065,0.00011067265,0.000982583],"study_design_scores_gemma":[0.00030771445,0.00016738953,0.09508927,0.00006929333,9.3533407e-7,0.0000013321168,0.0010970626,0.013757798,0.88932914,0.000050185226,0.00003554181,0.00009434178],"about_ca_topic_score_codex":0.00013391724,"about_ca_topic_score_gemma":0.0000933579,"teacher_disagreement_score":0.05742744,"about_ca_system_score_codex":0.00023726889,"about_ca_system_score_gemma":0.0001207582,"threshold_uncertainty_score":0.87627983},"labels":[],"label_agreement":null},{"id":"W2136328025","doi":"10.1080/10889860091114220","title":"Protocols To Enhance Biodegradation of Hydrocarbon Contaminants in Soil","year":2000,"lang":"en","type":"article","venue":"Bioremediation Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Phenanthrene; Creosote; Environmental chemistry; Contamination; Biodegradation; Chemistry; Soil contamination; Hydrocarbon; Bioremediation; Anthracene; Naphthalene; Soil water; Pyrene; Desorption; Polycyclic aromatic hydrocarbon; Total petroleum hydrocarbon; Petroleum; Environmental science; Adsorption; Organic chemistry; Soil science; Ecology","score_opus":0.009804583884749996,"score_gpt":0.267014433939738,"score_spread":0.25720985005498803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2136328025","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99646634,0.0000055009887,0.000109756766,0.0004576372,0.00009603552,0.0015313555,0.000007970633,0.00001021119,0.0013152029],"genre_scores_gemma":[0.9985713,0.00004075047,0.00064018345,0.00024334891,0.000073108444,0.00006545162,0.000006609088,0.000007188217,0.0003520857],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99862325,0.00007679231,0.0005025566,0.00017787749,0.0004075098,0.0002120362],"domain_scores_gemma":[0.99950796,0.000016904998,0.00019868342,0.00011717617,0.000020810814,0.00013843813],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00053796364,0.000106860796,0.00015141258,0.000098090604,0.00004716244,0.000025526042,0.00018129824,0.00007316975,0.0044618705],"category_scores_gemma":[0.000081953505,0.00009247324,0.00003914635,0.0004365993,0.00004740667,0.00022616409,0.00002062872,0.000114998555,0.00057228864],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013537754,0.00017132158,0.1181067,0.0000060056755,0.0000035575106,0.0000044613516,0.0007865556,0.0003597226,0.7454161,0.0000024255241,0.0027121603,0.13229564],"study_design_scores_gemma":[0.00083919376,0.0002578638,0.39732924,0.00008430884,0.0000049263567,0.000012365076,0.00005592177,0.00051520666,0.5853729,0.00007050588,0.01521339,0.00024416426],"about_ca_topic_score_codex":0.00005735793,"about_ca_topic_score_gemma":0.00028957298,"teacher_disagreement_score":0.27922255,"about_ca_system_score_codex":0.0001548148,"about_ca_system_score_gemma":0.000031485386,"threshold_uncertainty_score":0.99644816},"labels":[],"label_agreement":null},{"id":"W2136539702","doi":"10.1139/cjm-2014-0214","title":"Hydrocarbonoclastic biofilms based on sewage microorganisms and their application in hydrocarbon removal in liquid wastes","year":2014,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Effluent; Biofilm; Microcosm; Bioremediation; Sewage; Hydrocarbon; Microbiology; Bacteria; Microorganism; Biology; Environmental chemistry; Chemistry; Environmental engineering; Environmental science","score_opus":0.0038796458080189457,"score_gpt":0.16671280802569965,"score_spread":0.1628331622176807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2136539702","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982488,0.000060752624,0.00010252426,0.0006967761,0.00012407031,0.00011107009,0.000014289966,0.000002944699,0.0006387785],"genre_scores_gemma":[0.9985774,0.000008590148,0.0002583034,0.0010925408,0.000030355863,7.08931e-7,0.000010138873,0.000010301764,0.0000116397205],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989889,0.00013504407,0.00034537533,0.0002052966,0.000028952634,0.0002964129],"domain_scores_gemma":[0.9994381,0.000073745556,0.00015790992,0.00011884597,0.000007503059,0.00020389196],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045871257,0.00014149635,0.00022502126,0.00025484248,0.000033996537,0.000012629436,0.00019587683,0.00015338109,0.00012493873],"category_scores_gemma":[0.00006888053,0.000115755116,0.000032869648,0.00021555823,0.00018576186,0.00004206875,0.000017241415,0.00021227341,0.00004343275],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051530034,0.000016566451,0.012074173,0.0000029747696,0.0000019694326,0.000015029276,0.00016464022,0.00029514634,0.98609596,0.000010471195,0.00010821766,0.001163303],"study_design_scores_gemma":[0.0040519545,0.001936065,0.04789706,0.0002024352,0.000017494756,0.0008491204,0.00025008628,0.008943343,0.8998096,0.00033641278,0.0348664,0.0008400408],"about_ca_topic_score_codex":0.0020477902,"about_ca_topic_score_gemma":0.060629368,"teacher_disagreement_score":0.08628639,"about_ca_system_score_codex":0.00025774929,"about_ca_system_score_gemma":0.00010138927,"threshold_uncertainty_score":0.9565117},"labels":[],"label_agreement":null},{"id":"W2136791851","doi":"10.1126/science.aab3472","title":"Monodehydroascorbate reductase mediates TNT toxicity in plants","year":2015,"lang":"en","type":"article","venue":"Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":98,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; Engineering and Physical Sciences Research Council; W. Garfield Weston Foundation; Garfield Weston Foundation","keywords":"Phytotoxicity; Trinitrotoluene; Environmental remediation; Reductase; Chemistry; Environmental chemistry; Economic shortage; Pollutant; Contamination; Biology; Botany; Explosive material; Biochemistry; Enzyme; Organic chemistry; Ecology","score_opus":0.02235036126882934,"score_gpt":0.24484892441106884,"score_spread":0.2224985631422395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2136791851","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99300504,0.000021918904,0.000005617628,0.00033955605,0.000326946,0.000103104336,0.000010659667,0.00002524052,0.0061619026],"genre_scores_gemma":[0.9989889,0.000016105469,0.00046696048,0.00031790804,0.000019427884,0.0000015602237,0.0000024908768,0.0000030407639,0.00018360754],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99864054,0.000026933441,0.00016133195,0.00033688077,0.00049417117,0.0003401402],"domain_scores_gemma":[0.9994773,0.000011983998,0.000051294264,0.00018598416,0.000008632318,0.0002647899],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009765335,0.00008621481,0.000084354455,0.000061751394,0.000063789426,0.00004029959,0.00043912666,0.000032968546,0.00043446073],"category_scores_gemma":[0.00019116754,0.0000696945,0.000013122833,0.00062367925,0.00056729163,0.00039996524,0.0002125175,0.00007556026,0.0015018384],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015069567,0.00006931282,0.077480786,8.4769835e-7,3.9295202e-7,0.000012267109,0.0009902209,0.00024324509,0.91556585,0.000010257555,0.002885552,0.0027262068],"study_design_scores_gemma":[0.00061659724,0.000078066034,0.18028118,0.00001302966,0.0000015388393,0.000013651996,0.0003501497,0.003091453,0.8083914,0.00091761927,0.0059185172,0.0003268042],"about_ca_topic_score_codex":0.00022955032,"about_ca_topic_score_gemma":0.00034194798,"teacher_disagreement_score":0.10717445,"about_ca_system_score_codex":0.00023208252,"about_ca_system_score_gemma":0.000072279014,"threshold_uncertainty_score":0.9992756},"labels":[],"label_agreement":null},{"id":"W2137147583","doi":"10.5376/ijms.2015.05.0027","title":"The Effect of Biostimulation and Biostimulation-Bioaugmentation on Biodegradation of Oil-Pollution on Sandy Beaches Using Mesocosms","year":2015,"lang":"en","type":"article","venue":"International Journal of Marine Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Biostimulation; Bioaugmentation; Mesocosm; Environmental science; Biodegradation; Pollution; Oil pollution; Environmental engineering; Bioremediation; Contamination; Ecology; Biology; Ecosystem","score_opus":0.020219779486359724,"score_gpt":0.2925938016651363,"score_spread":0.2723740221787766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2137147583","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980138,0.0000097615075,0.00027171712,0.00056787935,0.00052056066,0.00007710932,0.000008322307,0.0000030753413,0.0005277638],"genre_scores_gemma":[0.99876267,0.00002443806,0.0010936934,0.000041561365,0.000045413195,2.8594113e-7,0.000005522692,0.00000319649,0.000023227623],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982768,0.00007785269,0.0004147968,0.00012830624,0.0010089555,0.000093262875],"domain_scores_gemma":[0.99882513,0.00017731657,0.0006655053,0.000084384024,0.00017761312,0.00007007106],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016043041,0.00008827554,0.000110943925,0.00017886989,0.00008486133,0.000044696426,0.00027983484,0.000030966283,0.000035575897],"category_scores_gemma":[0.0006432695,0.000056181,0.00004040096,0.00029814415,0.00042015698,0.00037444482,0.00011837941,0.00006780887,0.00000517916],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00087873486,0.0000920552,0.21430455,0.0000055952864,0.000027387434,0.0000014423421,0.0002694908,0.03627912,0.6007372,0.00022139274,0.00012588927,0.14705715],"study_design_scores_gemma":[0.0022758506,0.00142354,0.28157574,0.00010057799,0.000033775865,0.000024704588,0.00009933161,0.036768753,0.6768227,0.00045130448,0.00027825186,0.00014542269],"about_ca_topic_score_codex":0.00008936026,"about_ca_topic_score_gemma":0.000012029454,"teacher_disagreement_score":0.14691171,"about_ca_system_score_codex":0.00024618625,"about_ca_system_score_gemma":0.000046673707,"threshold_uncertainty_score":0.22909947},"labels":[],"label_agreement":null},{"id":"W2137347189","doi":"10.1128/aem.71.12.8257-8264.2005","title":"Multiple Reductive-Dehalogenase-Homologous Genes Are Simultaneously Transcribed during Dechlorination by <i>Dehalococcoides-</i> Containing Cultures","year":2005,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":126,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Dehalococcoides; Dehalogenase; Gene; Reductive dechlorination; Biology; Genetics; Chemistry; Biochemistry; Vinyl chloride; Biodegradation","score_opus":0.004261309580924599,"score_gpt":0.1787333034459183,"score_spread":0.1744719938649937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2137347189","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981382,0.0004377558,0.000035804456,0.00021467388,0.00008547674,0.00040087727,0.00030367845,0.00006780501,0.000315758],"genre_scores_gemma":[0.9977663,0.0004457992,0.00046514094,0.0005410247,0.000081755425,0.00002228174,0.00041289162,0.000026050038,0.00023873373],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984853,0.000050495746,0.00031438255,0.0006255277,0.0000785439,0.0004457217],"domain_scores_gemma":[0.99950755,0.000049632883,0.00015513203,0.00015787869,0.0000020631849,0.00012774777],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000101807214,0.00030793334,0.0002658536,0.00002984552,0.00027866807,0.000022344359,0.00017150815,0.00022656684,0.00073187455],"category_scores_gemma":[0.0000073840383,0.0002785306,0.000057116355,0.000066066306,0.00049233146,0.00010329596,0.00012488605,0.00017005713,0.00031399968],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011679021,0.00014295924,0.012209357,0.0000049526384,0.00002112896,0.0000069783114,0.00041575762,0.00021453005,0.9812111,0.0000036023496,0.0006685987,0.004984224],"study_design_scores_gemma":[0.0017765823,0.00009879395,0.012991413,0.0000063170874,0.000027791444,0.00017217472,0.0009312418,0.0000583907,0.94855666,0.000011944581,0.034854703,0.00051396305],"about_ca_topic_score_codex":0.000058873433,"about_ca_topic_score_gemma":0.00019908791,"teacher_disagreement_score":0.034186102,"about_ca_system_score_codex":0.00024391168,"about_ca_system_score_gemma":0.0000031068844,"threshold_uncertainty_score":0.9999667},"labels":[],"label_agreement":null},{"id":"W2137379828","doi":"10.1007/s00253-002-1038-0","title":"Biostimulation and bioaugmentation for on-site treatment of weathered diesel fuel in Arctic soil","year":2002,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":110,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Royal Military College of Canada","funders":"Ministère de la Défense Nationale; National Science Council","keywords":"Biostimulation; Microcosm; Bioaugmentation; Bioremediation; Total petroleum hydrocarbon; Environmental chemistry; Diesel fuel; Soil contamination; Phylotype; Chemistry; Biology; Soil water; Ecology; Bacteria; Contamination; 16S ribosomal RNA","score_opus":0.012200586289169726,"score_gpt":0.20622267053397247,"score_spread":0.19402208424480274,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2137379828","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980432,0.00015071673,0.00004743199,0.00108862,0.00003559937,0.00041583975,0.00005166662,0.00002033825,0.00014662814],"genre_scores_gemma":[0.99823916,0.0008267988,0.00065337616,0.0001529801,0.000005889684,0.000015256974,0.000044423883,0.0000050000117,0.00005714121],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993557,0.000014142805,0.00017773345,0.000276805,0.000015477306,0.00016014723],"domain_scores_gemma":[0.999749,0.00005408034,0.000081118866,0.00009363191,0.0000032887424,0.000018860543],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005464407,0.00011649216,0.00016770413,0.00008748867,0.000040564628,0.0000031454506,0.000042260515,0.00028711846,0.00013275244],"category_scores_gemma":[0.000007869389,0.000092573755,0.000017661418,0.000114655515,0.00037620217,0.000017804166,0.000031090844,0.000042161046,0.000039076593],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000821636,0.0001352235,0.008119773,0.000009890196,0.000009538452,3.9817712e-7,0.00022351205,0.000008503729,0.970511,0.00028032984,0.000056160086,0.020563459],"study_design_scores_gemma":[0.0044028535,0.0013412831,0.01984784,0.000013221409,0.000029103081,0.00001951644,0.00015156236,0.0004239997,0.96571964,0.0007794598,0.006990155,0.00028135374],"about_ca_topic_score_codex":0.000047697733,"about_ca_topic_score_gemma":0.00032000337,"teacher_disagreement_score":0.020282106,"about_ca_system_score_codex":0.00005383024,"about_ca_system_score_gemma":0.0000014341655,"threshold_uncertainty_score":0.37750483},"labels":[],"label_agreement":null},{"id":"W2137819808","doi":"10.1061/(asce)0733-9372(2006)132:2(279)","title":"Biodegradability of Surfactants under Aerobic, Anoxic, and Anaerobic Conditions","year":2006,"lang":"en","type":"article","venue":"Journal of Environmental Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Biodegradation; Chemistry; Sulfate; Anoxic waters; Anaerobic exercise; Respirometer; Nitrate; Denitrification; Rhamnolipid; Environmental chemistry; Oxygen; Organic chemistry; Bacteria; Nitrogen","score_opus":0.0038690928299553676,"score_gpt":0.17420969476927262,"score_spread":0.17034060193931724,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2137819808","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992236,0.000118561366,0.0002576822,0.000060965165,0.00010203508,0.0000665458,0.00004764787,0.0000065163813,0.000116449446],"genre_scores_gemma":[0.99793404,0.00006315259,0.0018984486,0.000024518571,0.00002439783,2.5392484e-7,0.000006139889,0.000009791356,0.000039274582],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990868,0.000017702989,0.00041233114,0.000116516356,0.00022114537,0.00014549178],"domain_scores_gemma":[0.9995727,0.000035564295,0.00020941468,0.000095927266,0.0000028269237,0.00008358797],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015339583,0.00012352213,0.00018702824,0.000050684266,0.000032183583,0.0000099735835,0.0000988999,0.00005874165,0.0010276015],"category_scores_gemma":[0.000009796242,0.00010748504,0.000069309106,0.000088372006,0.00014259198,0.00022601298,0.000055913475,0.000111054804,0.000021712905],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008116017,0.00010282558,0.03663596,0.0000055371,0.000010974654,0.0000038181597,0.000020045432,0.0060156146,0.9568572,0.000015896658,0.00018499859,0.00013899383],"study_design_scores_gemma":[0.00046851434,0.000089938985,0.8749156,0.000016752494,0.000022189677,0.000059299367,0.000050502666,0.00036116084,0.12329004,0.000054115222,0.0005256429,0.00014623093],"about_ca_topic_score_codex":0.0000280918,"about_ca_topic_score_gemma":0.000011219889,"teacher_disagreement_score":0.83827966,"about_ca_system_score_codex":0.00014067134,"about_ca_system_score_gemma":0.0000044502985,"threshold_uncertainty_score":0.9998856},"labels":[],"label_agreement":null},{"id":"W2138329279","doi":"10.1128/genomea.01066-13","title":"Complete Genome Sequence of <i>Bacteroidales</i> Strain CF from a Chloroform-Dechlorinating Enrichment Culture","year":2013,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Chloroform; Whole genome sequencing; Strain (injury); Biology; Organism; Metagenomics; Enrichment culture; Genome; Microbiology; Gene; Bacteria; Genetics; Chromatography; Chemistry; Anatomy","score_opus":0.02211203489610673,"score_gpt":0.22379632783817457,"score_spread":0.20168429294206786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138329279","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9913993,0.000061004357,0.0001217854,0.00013996958,0.00021034852,0.0006392421,0.0035415255,0.000038883987,0.0038479504],"genre_scores_gemma":[0.99408454,0.0001062481,0.0020232697,0.0008992159,0.00007340226,0.000025117319,0.0016238539,0.000015769207,0.0011486119],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99797803,0.000040617822,0.0005100546,0.0004541418,0.00054441724,0.0004727341],"domain_scores_gemma":[0.9991365,0.000013723691,0.0003027568,0.00033666546,0.000044871922,0.00016547758],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00019614087,0.00025252995,0.00025530593,0.00003584734,0.00013429184,0.000060804927,0.00048576194,0.000093286,0.00946079],"category_scores_gemma":[0.00001443032,0.00021711862,0.00007627296,0.00026522277,0.00015344673,0.00039129786,0.0002974107,0.00013627035,0.0025939406],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008304951,0.00008852964,0.0135584455,0.00000954816,0.000028427132,0.0000022077536,0.0012450697,0.000032403088,0.9833552,0.0000063280404,0.00044951722,0.0012160154],"study_design_scores_gemma":[0.0022910417,0.00054008514,0.59830254,0.00005812967,0.00005263347,0.0000070450005,0.0013742979,0.00024019835,0.019126995,0.00074803055,0.37602645,0.0012325316],"about_ca_topic_score_codex":0.0010090441,"about_ca_topic_score_gemma":0.0000825229,"teacher_disagreement_score":0.9642282,"about_ca_system_score_codex":0.0002911825,"about_ca_system_score_gemma":0.000018055218,"threshold_uncertainty_score":0.99818265},"labels":[],"label_agreement":null},{"id":"W2138468564","doi":"10.5897/ajb2005.000-3033","title":"Production of bioemulsifier by an unusual isolate of salmon/red melanin containing Rhodotorula glutinis","year":2005,"lang":"en","type":"article","venue":"AFRICAN JOURNAL OF BIOTECHNOLOGY","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Rhodotorula; Yeast; Sodium dodecyl sulfate; Polyacrylamide gel electrophoresis; Mycelium; Food science; Gel electrophoresis; Biology; Chemistry; Spore; Emulsion; Chromatography; Melanin; Microbiology; Botany; Biochemistry; Enzyme","score_opus":0.009733137101682731,"score_gpt":0.2266072100250974,"score_spread":0.21687407292341468,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138468564","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99555993,0.00008201215,0.00024634218,0.003607252,0.00016347546,0.00008937005,0.000013884269,0.000016263108,0.00022147642],"genre_scores_gemma":[0.99674857,0.000085916676,0.003010389,0.000058233934,0.00003852361,3.005889e-7,0.0000018145001,0.000009088825,0.00004715053],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987085,0.00008085765,0.00061999215,0.00017422425,0.00021445431,0.00020198037],"domain_scores_gemma":[0.99882615,0.0000194188,0.00085705623,0.00018531278,0.00003786609,0.00007422944],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005072197,0.00011517865,0.00029543982,0.00014607754,0.000035853896,0.00000443716,0.00032058416,0.00021777755,0.00028895307],"category_scores_gemma":[0.0001241638,0.00009562838,0.000065323475,0.00037721623,0.00043784935,0.00016775528,0.00007075436,0.00022226662,0.000013064573],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013318626,0.00013951618,0.0054451283,0.0000026825714,0.000020412355,0.0000021375386,0.00033269054,0.00003158755,0.9703126,0.000027448927,0.0008469547,0.02270566],"study_design_scores_gemma":[0.0004174364,0.0010511063,0.0031820484,0.000013712584,0.0000203072,0.00006746261,0.00063114415,0.000081036844,0.98515993,0.000034733388,0.009237108,0.00010399849],"about_ca_topic_score_codex":0.000049894352,"about_ca_topic_score_gemma":0.000033368968,"teacher_disagreement_score":0.02260166,"about_ca_system_score_codex":0.00007681391,"about_ca_system_score_gemma":0.000021623111,"threshold_uncertainty_score":0.38996118},"labels":[],"label_agreement":null},{"id":"W2139562530","doi":"10.1002/rcm.7146","title":"Compound specific isotope analysis of hexachlorocyclohexane isomers: a method for source fingerprinting and field investigation of <i>in situ</i> biodegradation","year":2015,"lang":"en","type":"article","venue":"Rapid Communications in Mass Spectrometry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Environment and Climate Change Canada; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Svenska Forskningsrådet Formas","keywords":"Chemistry; Isotope analysis; Hexachlorocyclohexane; Environmental chemistry; Biodegradation; Dichloromethane; Isotope-ratio mass spectrometry; Fractionation; Isotopes of carbon; Contamination; Isotope; Gas chromatography; Mass spectrometry; Isotope fractionation; Chromatography; Solvent; Organic chemistry; Total organic carbon; Pesticide","score_opus":0.03789407105232425,"score_gpt":0.28702142615542636,"score_spread":0.2491273551031021,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2139562530","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9666284,0.00035175646,0.030601263,0.00091744354,0.000023142144,0.00030061658,0.000014199388,0.000011247857,0.0011519727],"genre_scores_gemma":[0.81925607,0.00032829275,0.18026729,0.00006283726,0.0000042324946,0.000007459153,0.00005356625,0.0000051132583,0.000015169789],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987894,0.00019598241,0.00050361105,0.00020739788,0.00016499539,0.00013858527],"domain_scores_gemma":[0.9985287,0.0005233133,0.00029685826,0.0005746423,0.000026342692,0.000050143564],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001203751,0.00009796855,0.00029124,0.00052421156,0.00003824288,0.000016255808,0.00038786247,0.00007557759,0.00007637007],"category_scores_gemma":[0.0001628172,0.00010341025,0.000059858663,0.0021479053,0.00014449572,0.00013775709,0.0001741854,0.00012821084,0.000002204555],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029632814,0.000081801445,0.3170308,0.00001312289,0.00003986518,8.0862584e-8,0.000938782,0.000368047,0.6763587,0.00020337253,0.000098530596,0.004837284],"study_design_scores_gemma":[0.0021978184,0.00029804197,0.46108115,0.00008576711,0.00022189626,0.000002773507,0.0030431843,0.06437744,0.4625081,0.002386875,0.0032853663,0.00051156053],"about_ca_topic_score_codex":0.00041377384,"about_ca_topic_score_gemma":0.00087301695,"teacher_disagreement_score":0.21385056,"about_ca_system_score_codex":0.00013702543,"about_ca_system_score_gemma":0.000014121718,"threshold_uncertainty_score":0.4216948},"labels":[],"label_agreement":null},{"id":"W2140096309","doi":"10.1128/aem.00717-14","title":"Metatranscriptome of an Anaerobic Benzene-Degrading, Nitrate-Reducing Enrichment Culture Reveals Involvement of Carboxylation in Benzene Ring Activation","year":2014,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":117,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Ontario; Ontario Genomics","keywords":"Benzene; Carboxylation; Nitrate; Anaerobic exercise; Chemistry; Environmental chemistry; Enrichment culture; Biodegradation; Ring (chemistry); Biochemistry; Biology; Bacteria; Organic chemistry; Catalysis; Genetics; Physiology","score_opus":0.006327185837774516,"score_gpt":0.19152959845486556,"score_spread":0.18520241261709103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140096309","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990273,0.000043779855,0.00008220114,0.000019740106,0.00004652517,0.00029824532,0.00003007747,0.000009019854,0.00044308702],"genre_scores_gemma":[0.9981165,0.00009180969,0.0013669125,0.00012508965,0.000015692953,0.000007673652,0.00024319804,0.000011252325,0.000021903195],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988129,0.000074787335,0.00043501647,0.0003708094,0.00008168722,0.00022476347],"domain_scores_gemma":[0.99952954,0.000017953796,0.00022981211,0.00015850275,0.0000018487175,0.00006236277],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029590828,0.00018238253,0.00028462237,0.00006934717,0.000048071164,0.000005594637,0.000118644195,0.00013943497,0.00022282147],"category_scores_gemma":[0.0000032652006,0.00016436048,0.000036380494,0.00011755372,0.00016912066,0.00010782814,0.00007055029,0.000101333724,0.00000823965],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030046021,0.00014848943,0.016857753,0.000019280948,0.000013502402,1.743947e-7,0.0009162773,0.0004531738,0.97919726,0.00008022311,0.00001816644,0.0022656727],"study_design_scores_gemma":[0.00081774994,0.00018627406,0.08888306,0.000017890565,0.000019751938,0.0000026324353,0.00037947975,0.00013280743,0.90892094,0.0001327473,0.00032100003,0.00018564455],"about_ca_topic_score_codex":0.00023849578,"about_ca_topic_score_gemma":0.00008345715,"teacher_disagreement_score":0.0720253,"about_ca_system_score_codex":0.00012655726,"about_ca_system_score_gemma":0.0000031674772,"threshold_uncertainty_score":0.6702426},"labels":[],"label_agreement":null},{"id":"W2141403175","doi":"10.1128/aem.68.12.5933-5942.2002","title":"Gene Cloning and Characterization of Multiple Alkane Hydroxylase Systems in<i>Rhodococcus</i>Strains Q15 and NRRL B-16531","year":2002,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":237,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Monooxygenase; Biology; AlkB; Alkane; Gene; Pseudomonas putida; Rhodococcus; Escherichia coli; Gene cluster; Heterologous expression; Genetics; Pseudomonas; Biochemistry; Bacteria; Enzyme; Cytochrome P450; Recombinant DNA","score_opus":0.006937680980837268,"score_gpt":0.15998749613603902,"score_spread":0.15304981515520175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141403175","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99904287,0.00019125563,0.000010872985,0.000043570442,0.000047593905,0.000289256,0.00018231927,0.0000097091115,0.00018252716],"genre_scores_gemma":[0.99839264,0.0010577017,0.00011976864,0.0001490161,0.000015763486,0.000006910811,0.00018262486,0.00001046128,0.00006511646],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990928,0.000036099274,0.0002660843,0.0003470143,0.000039106286,0.00021885968],"domain_scores_gemma":[0.99969244,0.000023879666,0.00011121899,0.00009578427,5.62063e-7,0.000076086166],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000103803315,0.00016107586,0.00021699048,0.000037216687,0.00006186447,0.00001183183,0.000058279667,0.00012999553,0.00026201515],"category_scores_gemma":[0.00000276847,0.00014909248,0.0000137136185,0.000051683255,0.00040980187,0.00006394718,0.00014832322,0.00008274698,0.000037477148],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010383823,0.00007268986,0.04955245,0.000011655415,0.0000059886124,0.0000021069052,0.0003586808,0.000008103008,0.9477975,0.0000054063084,0.000020458505,0.0021546038],"study_design_scores_gemma":[0.002793597,0.00019874003,0.3939924,0.000024948567,0.000027657416,0.00017470394,0.00039490144,0.0013487965,0.5942082,0.000012403993,0.0062594865,0.0005641518],"about_ca_topic_score_codex":0.00006591857,"about_ca_topic_score_gemma":0.000022634598,"teacher_disagreement_score":0.35358927,"about_ca_system_score_codex":0.0000391537,"about_ca_system_score_gemma":9.2937006e-7,"threshold_uncertainty_score":0.6079815},"labels":[],"label_agreement":null},{"id":"W2141590932","doi":"10.1351/pac-con-08-09-25","title":"Newly isolated marine Bacillus pumilus (SP21): A source of novel lipoamides and other antimicrobial agents","year":2009,"lang":"en","type":"article","venue":"Pure and Applied Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Prince Edward Island","funders":"Natural Sciences and Engineering Research Council of Canada; Dalhousie University","keywords":"Bacillus pumilus; Chemistry; Antimicrobial; Surfactin; Isolation (microbiology); Fractionation; Bacillus (shape); Bacteria; Microbiology; Chromatography; Bacillus subtilis; Organic chemistry; Biology","score_opus":0.007041485453788145,"score_gpt":0.19409568891289697,"score_spread":0.18705420345910884,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141590932","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9875735,0.000013023076,0.0000721726,0.00018893596,0.000011277907,0.000092575385,0.000022155325,0.000022277054,0.0120040495],"genre_scores_gemma":[0.9978569,0.00002820815,0.00042635135,0.0008532582,0.000033611774,7.0549066e-7,0.000013575361,0.000007505294,0.00077986636],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993152,0.000002653284,0.00016752852,0.0002437734,0.00010080765,0.0001700256],"domain_scores_gemma":[0.9997158,0.000006961384,0.00008538153,0.00011133326,0.000003962092,0.000076575576],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000054398766,0.00013680824,0.00014638469,0.00000767799,0.00004895636,0.000021609168,0.00009180237,0.00011273149,0.00081962073],"category_scores_gemma":[0.0000049993446,0.000120775294,0.000022762826,0.00008695648,0.00012271787,0.000027591717,0.00007921022,0.00008260993,0.000013255589],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044651497,0.00008432267,0.0025840125,0.000019027533,0.000008255105,5.7782574e-7,0.00011286914,0.000014238464,0.9838838,0.0000034039058,0.0012880198,0.011956794],"study_design_scores_gemma":[0.0013628816,0.000025299834,0.01086365,0.000015819203,0.000025680953,0.000022663184,0.000038154223,0.00028581684,0.97286695,0.000036328227,0.014187784,0.0002689941],"about_ca_topic_score_codex":0.000032110172,"about_ca_topic_score_gemma":0.0000063502607,"teacher_disagreement_score":0.012899764,"about_ca_system_score_codex":0.00001543415,"about_ca_system_score_gemma":0.000004987325,"threshold_uncertainty_score":0.8974272},"labels":[],"label_agreement":null},{"id":"W2141606648","doi":"10.1098/rstb.2012.0322","title":"Overview of organohalide-respiring bacteria and a proposal for a classification system for reductive dehalogenases","year":2013,"lang":"en","type":"review","venue":"Philosophical Transactions of the Royal Society B Biological Sciences","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":317,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Dehalogenase; Obligate; Bacteria; Phylum; Metagenomics; Obligate anaerobe; Anaerobic respiration; Biology; Chemistry; Microbiology; Biochemistry; Gene; Ecology; Genetics","score_opus":0.17682258276950633,"score_gpt":0.33864721574627205,"score_spread":0.16182463297676572,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141606648","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.017762292,0.9418478,0.010325457,0.0052824714,0.0014463473,0.018654285,0.004060926,0.0001747454,0.00044566693],"genre_scores_gemma":[0.20115355,0.77713853,0.020695837,0.000069757545,0.00021231567,0.00061253057,0.000038856357,0.000028259488,0.00005036795],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981783,0.00018163741,0.00064336363,0.00052117184,0.00022410309,0.00025143652],"domain_scores_gemma":[0.9987032,0.00044262985,0.00054649834,0.00017924925,0.000044784774,0.00008365438],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006893354,0.00025564697,0.0007642364,0.000017537444,0.00037094005,0.000029096282,0.00056686293,0.00035709754,0.0001587444],"category_scores_gemma":[0.00010119443,0.00012750617,0.00079457404,0.00038897677,0.0017978823,0.000070602146,0.00006804792,0.00014306196,0.0000045642373],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015703202,0.0013981856,0.00053021574,0.033768922,0.00082861213,1.5652557e-7,0.0006664398,0.000077173434,0.06751067,0.013847865,0.0006598834,0.88055485],"study_design_scores_gemma":[0.007949378,0.015530218,0.006292213,0.047171563,0.012822896,0.00016935547,0.00423248,0.017186215,0.058652263,0.09884819,0.7203766,0.010768606],"about_ca_topic_score_codex":0.000042975185,"about_ca_topic_score_gemma":0.0000030396986,"teacher_disagreement_score":0.86978626,"about_ca_system_score_codex":0.000118527474,"about_ca_system_score_gemma":0.000089630325,"threshold_uncertainty_score":0.6624372},"labels":[],"label_agreement":null},{"id":"W2141643441","doi":"10.1002/cjce.5450840312","title":"Cometabolic Transformation of 2‐Chlorophenol and 4‐Chlorophenol in the Presence of Phenol by <i>Pseudomonas putida</i>","year":2006,"lang":"en","type":"article","venue":"The Canadian Journal of Chemical Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Pseudomonas putida; Cometabolism; Phenol; Chemistry; Substrate (aquarium); Biodegradation; Pseudomonas; Chlorophenol; Kinetics; Nuclear chemistry; Degradation (telecommunications); Biotransformation; Transformation (genetics); Medicinal chemistry; Stereochemistry; Chromatography; Bacteria; Biochemistry; Organic chemistry; Bioremediation; Biology; Enzyme; Ecology","score_opus":0.00377622725706766,"score_gpt":0.16014462906755184,"score_spread":0.15636840181048417,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141643441","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99883497,0.00024918004,0.000058078156,0.0004682677,0.000037402297,0.00009164661,0.000016203368,0.0000015085201,0.00024275525],"genre_scores_gemma":[0.9998229,0.000008628662,0.000085110536,0.000049223112,0.000022921195,6.030169e-7,0.0000015396882,0.000004870638,0.0000041738635],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992404,0.00001943323,0.00034115562,0.000051390518,0.00019421052,0.00015340424],"domain_scores_gemma":[0.99963737,0.00006828676,0.00012165242,0.000081674225,0.000013937237,0.00007710027],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030160238,0.00007688974,0.00013877793,0.000040634408,0.000022778906,0.0000134936345,0.000269584,0.000043462398,0.000057922425],"category_scores_gemma":[0.000047932364,0.000048502283,0.000035181925,0.00021552233,0.00014804993,0.00010415896,0.000009355661,0.00015490134,0.0000013414005],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000087518565,0.000013300575,0.0015982535,0.000014430136,0.000005138034,0.000001756948,0.0009555829,0.002061168,0.99411017,0.0001543555,0.0003600588,0.00071706116],"study_design_scores_gemma":[0.000657862,0.000040811887,0.009408897,0.000051621555,0.000024499994,0.00005888455,0.00008387445,0.0014884138,0.98574084,0.00017024862,0.00213383,0.00014022824],"about_ca_topic_score_codex":0.0037435058,"about_ca_topic_score_gemma":0.0006066918,"teacher_disagreement_score":0.008369314,"about_ca_system_score_codex":0.000052375173,"about_ca_system_score_gemma":0.000029770488,"threshold_uncertainty_score":0.5659086},"labels":[],"label_agreement":null},{"id":"W2142176767","doi":"10.1128/aem.72.4.2765-2774.2006","title":"Quantitative PCR Targeting 16S rRNA and Reductive Dehalogenase Genes Simultaneously Monitors Multiple<i>Dehalococcoides</i>Strains","year":2006,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":474,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Toronto; U.S. Department of Energy; Environmental Security Technology Certification Program; National Science Foundation","keywords":"Dehalococcoides; Biology; Dehalogenase; 16S ribosomal RNA; Gene; Microbiology; Ribosomal RNA; Computational biology; Genetics; Chemistry","score_opus":0.005327945064705403,"score_gpt":0.18234042343692794,"score_spread":0.17701247837222253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142176767","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980551,0.00040703084,0.00005109074,0.00009608739,0.000101501704,0.00039441598,0.00030636907,0.000039054135,0.0005493362],"genre_scores_gemma":[0.99641377,0.00029692097,0.002436631,0.00021814124,0.00006500186,0.000011931044,0.00040209197,0.000025162943,0.00013037965],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984325,0.000060606806,0.00033488852,0.0006579079,0.00006992714,0.00044415923],"domain_scores_gemma":[0.9995029,0.000098807766,0.00014887199,0.0001300094,0.000002084035,0.00011732858],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001370422,0.00031911704,0.00026265683,0.00003836811,0.00027244785,0.000026689053,0.0001218068,0.00019604094,0.0003564331],"category_scores_gemma":[0.000010304521,0.00028558576,0.00004410588,0.00007591682,0.0010754077,0.00007971639,0.00022497623,0.00015912708,0.0002102057],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048520447,0.00010651854,0.028412385,0.0000048454685,0.000016813248,0.000012156766,0.0002479927,0.0001675948,0.9681674,0.000043294203,0.00048356087,0.0022889173],"study_design_scores_gemma":[0.002776357,0.00039394284,0.09158764,0.000012912927,0.00008061848,0.00024893327,0.0039280653,0.00043561036,0.8790371,0.000375508,0.019747574,0.0013757636],"about_ca_topic_score_codex":0.0003085818,"about_ca_topic_score_gemma":0.00011724905,"teacher_disagreement_score":0.08913033,"about_ca_system_score_codex":0.000119852135,"about_ca_system_score_gemma":0.0000047597955,"threshold_uncertainty_score":0.99995965},"labels":[],"label_agreement":null},{"id":"W2142324671","doi":"10.1111/j.1745-6592.2008.00197.x","title":"Demonstration of Enhanced Bioremediation in a TCE Source Area at Launch Complex 34, Cape Canaveral Air Force Station","year":2008,"lang":"en","type":"article","venue":"Groundwater Monitoring & Remediation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":69,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Environmental Security Technology Certification Program; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Small Business Innovation Research; National Aeronautics and Space Administration","keywords":"Bioremediation; Microcosm; Bioaugmentation; Environmental chemistry; Chemistry; Reductive dechlorination; Contamination; Biodegradation; Environmental remediation; Environmental science; Organic chemistry","score_opus":0.02437355571272981,"score_gpt":0.2250279436441408,"score_spread":0.200654387931411,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142324671","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948937,0.000010453318,0.0034598047,0.00013917584,0.00053379784,0.00043389932,0.00001480185,0.00006198729,0.0004523748],"genre_scores_gemma":[0.9976029,0.000077340985,0.0009665277,0.000048662903,0.00019086119,0.000021437747,0.00032726562,0.000021156415,0.0007438684],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99775475,0.000113411996,0.0006480703,0.00041633387,0.0006893069,0.00037810445],"domain_scores_gemma":[0.9991502,0.00006368327,0.0003839167,0.00022377328,0.000065137196,0.00011324675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034406676,0.00022607509,0.0002358574,0.00015100332,0.00015516773,0.00001787571,0.0001674196,0.0001629159,0.00023412102],"category_scores_gemma":[0.00006995771,0.00022435655,0.00006104915,0.00046051128,0.00013173504,0.00056882465,0.00007839987,0.00013325301,0.00012172064],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053253796,0.000060682916,0.31625363,0.000011834757,0.000004885061,0.0000018221178,0.002063386,0.001591768,0.67837626,0.0000021543854,0.00017038663,0.00140992],"study_design_scores_gemma":[0.0006559352,0.00007041632,0.57757705,0.000017124754,0.0000074554987,0.0000039953907,0.00013035537,0.0013863624,0.41958553,0.000016483435,0.00035888416,0.00019037399],"about_ca_topic_score_codex":0.002964149,"about_ca_topic_score_gemma":0.0035116726,"teacher_disagreement_score":0.26132345,"about_ca_system_score_codex":0.0011845337,"about_ca_system_score_gemma":0.00003993899,"threshold_uncertainty_score":0.91489947},"labels":[],"label_agreement":null},{"id":"W2142601151","doi":"10.1128/jb.185.18.5333-5341.2003","title":"Characterization of Hybrid Toluate and Benzoate Dioxygenases","year":2003,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Dioxygenase; Benzoates; Stereochemistry; Oxygenase; Biology; Dihydroxylation; Biochemistry; Substrate (aquarium); Enzyme; Chemistry; Catalysis; Organic chemistry; Enantioselective synthesis","score_opus":0.008775679507479832,"score_gpt":0.20450385740241603,"score_spread":0.19572817789493618,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142601151","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993512,0.000013401099,0.000077129676,0.000109980865,0.00018840161,0.00003443865,0.000009734436,0.0000016379917,0.00021408593],"genre_scores_gemma":[0.999349,0.00018117116,0.00025690233,0.00013377912,0.000018775125,1.1376616e-7,0.000003190635,0.000003037762,0.000054060554],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999423,0.00007899419,0.0002875714,0.0000639042,0.000063726286,0.000082750084],"domain_scores_gemma":[0.99952704,0.000016625203,0.0003420956,0.00004766917,0.000016764943,0.000049809507],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021764117,0.0000547801,0.0001530725,0.000029031955,0.000018063763,0.0000054684388,0.000055726865,0.00002550907,0.0009327907],"category_scores_gemma":[0.000059535403,0.000041060764,0.000029797946,0.00004511031,0.00008653609,0.00011123198,0.000020029522,0.000049805432,0.000017057007],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000231557,0.000020630827,0.033957414,0.0000026486014,0.000006498888,0.000004826709,0.000040278555,0.0000016718814,0.9648809,0.000014375431,0.000058682464,0.0009889395],"study_design_scores_gemma":[0.00031637383,0.0001936336,0.44171348,0.000008235403,0.000010095659,0.00024292932,0.000010271003,0.0000084883795,0.54632396,0.00005428722,0.011057302,0.00006095706],"about_ca_topic_score_codex":0.000003835391,"about_ca_topic_score_gemma":0.0000030315696,"teacher_disagreement_score":0.41855693,"about_ca_system_score_codex":0.00001745365,"about_ca_system_score_gemma":0.000010065554,"threshold_uncertainty_score":0.9999805},"labels":[],"label_agreement":null},{"id":"W2142676657","doi":"10.1002/cjce.5450810614","title":"Biodegradation of High Strength Phenolic Wastewater in a Modified External Loop Inversed Fluidized Bed Airlift Bioreactor (EIFBAB)","year":2003,"lang":"en","type":"article","venue":"The Canadian Journal of Chemical Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Phenol; Biodegradation; Airlift; Bioreactor; Degradation (telecommunications); Chemistry; Wastewater; Pulp and paper industry; Volume (thermodynamics); Batch reactor; Volumetric flow rate; Chromatography; Waste management; Nuclear chemistry; Environmental science; Environmental engineering; Organic chemistry; Catalysis; Engineering; Physics","score_opus":0.008637292033681264,"score_gpt":0.17214640733296113,"score_spread":0.16350911529927986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142676657","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99947315,0.000026428037,0.000025629193,0.00021152779,0.00013052525,0.00006624637,0.000010420533,0.0000034571087,0.000052610394],"genre_scores_gemma":[0.9993193,0.000003875252,0.00057905994,0.00004967136,0.000025985402,5.0588335e-7,0.0000027056255,0.000009231328,0.000009675945],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99911,0.000028047618,0.00035710598,0.00008777876,0.00018569351,0.00023141888],"domain_scores_gemma":[0.9994776,0.00003096215,0.00012774904,0.00010690169,0.000016425563,0.00024034656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002659272,0.000110372035,0.00017877643,0.0000968646,0.00001889982,0.000018628183,0.00021199943,0.000095545845,0.00042224547],"category_scores_gemma":[0.00012924604,0.00007997872,0.00005662873,0.00022383206,0.00007595473,0.00010264602,0.000011276237,0.0002411593,0.000010524874],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013288568,0.000011552416,0.0010102018,0.0000045756246,0.00000785985,0.000006436903,0.00022215118,0.00093125505,0.99749,0.000056836227,0.00008881041,0.00015707249],"study_design_scores_gemma":[0.00071770523,0.000016347396,0.00056842767,0.00003687927,0.000009751278,0.000016465725,0.000013115808,0.00084121956,0.9974691,0.000046925536,0.00016472305,0.00009931598],"about_ca_topic_score_codex":0.0032757835,"about_ca_topic_score_gemma":0.0008212828,"teacher_disagreement_score":0.0024545009,"about_ca_system_score_codex":0.0002557327,"about_ca_system_score_gemma":0.00009074051,"threshold_uncertainty_score":0.49520266},"labels":[],"label_agreement":null},{"id":"W2143315140","doi":"10.1139/s04-040","title":"Optimization of nitrogen for bioventing of gasoline contaminated soil","year":2005,"lang":"en","type":"article","venue":"Journal of Environmental Engineering and Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Environmental remediation; Groundwater remediation; Environmental chemistry; Environmental science; Biodegradation; Gasoline; Nutrient; Population; Soil contamination; Environmental engineering; Soil water; Chemistry; Contamination; Ecology; Soil science; Biology","score_opus":0.003809128697075391,"score_gpt":0.179144270481798,"score_spread":0.17533514178472262,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143315140","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943966,0.00006753584,0.0053440854,0.00003315913,0.00005115109,0.000054015003,0.0000118372645,0.0000019759268,0.000039611543],"genre_scores_gemma":[0.98271716,0.00007078492,0.01716081,0.000012128701,0.000018155728,2.0057847e-7,7.9282e-7,0.000003588496,0.000016409247],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99930644,0.0000042794923,0.00029537972,0.00007883545,0.00020676287,0.00010829115],"domain_scores_gemma":[0.9996259,0.000021179794,0.00023611593,0.00004673199,0.000007576188,0.000062475585],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041419154,0.00005844183,0.00011536015,0.00005968676,0.000030735457,0.000006247864,0.00011548534,0.00002257757,0.00010900651],"category_scores_gemma":[0.000051425177,0.000049273236,0.000038066664,0.00011119035,0.00018571374,0.00020708985,0.000043441833,0.000037266025,8.950224e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010124464,0.000039039158,0.0047378875,0.000005757649,0.0000032676178,1.8654453e-7,0.000077657656,0.16119102,0.8322164,0.0000031142285,0.0000089177165,0.0017066351],"study_design_scores_gemma":[0.00065621507,0.0001983716,0.019613914,0.000033770717,0.000018127916,0.000025872107,0.0000718663,0.20577045,0.7731105,0.000003975422,0.00040000657,0.00009691284],"about_ca_topic_score_codex":0.0000025766153,"about_ca_topic_score_gemma":5.922918e-7,"teacher_disagreement_score":0.059105873,"about_ca_system_score_codex":0.000058015918,"about_ca_system_score_gemma":0.0000075506314,"threshold_uncertainty_score":0.20093042},"labels":[],"label_agreement":null},{"id":"W2143510420","doi":"10.1007/s10529-006-9093-8","title":"Direct estimation of the oxygen requirements of Achromobacter xylosoxidans for aerobic degradation of monoaromatic hydrocarbons (BTEX) in a bioscrubber","year":2006,"lang":"en","type":"article","venue":"Biotechnology Letters","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Achromobacter xylosoxidans; Ethylbenzene; BTEX; Benzene; Environmental chemistry; Oxygen; Chemistry; Biomass (ecology); Degradation (telecommunications); Environmental science; Analytical Chemistry (journal); Biology; Organic chemistry; Ecology","score_opus":0.007976486898480113,"score_gpt":0.20419167822808948,"score_spread":0.19621519132960938,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143510420","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996203,0.0000068015215,0.00085202017,0.002341179,0.000057943605,0.00042719804,0.000017578377,0.000015508966,0.0000787641],"genre_scores_gemma":[0.9968522,0.0000030365356,0.0029818949,0.000110095716,0.0000033160034,0.000008913192,0.0000144364585,0.0000066660464,0.00001945051],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991281,0.00003648258,0.00039916224,0.00016555874,0.0001293936,0.00014129396],"domain_scores_gemma":[0.9993896,0.000027662041,0.00033064667,0.00023906968,0.0000040716177,0.000008987512],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015210832,0.00009493345,0.00017206818,0.00009464299,0.000021462292,0.0000021049182,0.00022578187,0.00014700243,0.000024528565],"category_scores_gemma":[0.000042780386,0.00007289836,0.000062667605,0.00036843747,0.00031409814,0.00006816671,0.00006342311,0.000050934035,0.0000045456877],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010351625,0.00007720085,0.0148487035,0.000018089939,0.00000767276,8.994934e-8,0.00003100995,0.00019053732,0.9838972,0.000047825022,0.00029522815,0.0005760544],"study_design_scores_gemma":[0.00034510085,0.000032835345,0.10201762,0.000034090004,0.000015719137,4.807313e-7,0.00000881289,0.0007220632,0.89662856,0.000099062454,0.000031142394,0.000064522836],"about_ca_topic_score_codex":0.00032760235,"about_ca_topic_score_gemma":0.00033796928,"teacher_disagreement_score":0.08726869,"about_ca_system_score_codex":0.000084642714,"about_ca_system_score_gemma":0.000006435881,"threshold_uncertainty_score":0.2972709},"labels":[],"label_agreement":null},{"id":"W2143553991","doi":"10.1128/jb.01122-07","title":"Roles of Ring-Hydroxylating Dioxygenases in Styrene and Benzene Catabolism in<i>Rhodococcus jostii</i>RHA1","year":2007,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":89,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Genome British Columbia; Genome Canada","keywords":"Ethylbenzene; Benzene; Styrene; Biphenyl; Rhodococcus; Dioxygenase; Catabolism; Enzyme; Biochemistry; Chemistry; Catechol; Biology; Organic chemistry; Copolymer","score_opus":0.008169914114969302,"score_gpt":0.23401875889858675,"score_spread":0.22584884478361744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143553991","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99923915,0.00020057047,0.000027620265,0.000097564516,0.00013382739,0.000054464137,0.00000615617,0.0000019463303,0.0002387055],"genre_scores_gemma":[0.99903464,0.00020958338,0.000581523,0.000108988635,0.000051344214,1.4768894e-7,0.0000015799745,0.0000047896638,0.000007386863],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988819,0.000069806025,0.00063197745,0.00011221442,0.00009954703,0.00020455978],"domain_scores_gemma":[0.99933773,0.000107288935,0.0004003686,0.00006856115,0.000012497143,0.0000735363],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008568823,0.000090952344,0.00028876137,0.0001326191,0.000016539861,0.00000586727,0.00012344036,0.00008709199,0.00018013097],"category_scores_gemma":[0.00013650107,0.00007364661,0.00003289867,0.00015022885,0.00011140077,0.00013259427,0.00008686701,0.00016034405,0.0000049434507],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004537719,0.00003558753,0.34876063,0.000003906924,0.0000029600913,0.000021393542,0.0003633638,0.00006408742,0.64413506,0.0000041637395,0.0000103194325,0.0065531377],"study_design_scores_gemma":[0.00064383977,0.00011130657,0.9317884,0.00003384928,0.0000039009087,0.000060609967,0.00011589924,0.000031372372,0.06658099,0.00004393718,0.0005126226,0.00007329604],"about_ca_topic_score_codex":0.00018196616,"about_ca_topic_score_gemma":0.0018036806,"teacher_disagreement_score":0.5830277,"about_ca_system_score_codex":0.00006034674,"about_ca_system_score_gemma":0.000014287072,"threshold_uncertainty_score":0.30032215},"labels":[],"label_agreement":null},{"id":"W2145190981","doi":"10.1080/15226510701232690","title":"Influence of Catclaw<i>Mimosa Monancistra</i>on the Dissipation of Soil PAHS","year":2007,"lang":"en","type":"article","venue":"International Journal of Phytoremediation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Memorial University of Newfoundland; Consejo Nacional de Ciencia y Tecnología","keywords":"Pyrene; Phenanthrene; Phytoremediation; Rhizosphere; Environmental chemistry; Soil contamination; Chemistry; Soil water; Environmental science; Biology; Bacteria; Soil science; Heavy metals","score_opus":0.007244422410855538,"score_gpt":0.23886033879424137,"score_spread":0.23161591638338583,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145190981","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976409,0.000012164883,0.000568664,0.0006486858,0.00042485204,0.000079068705,0.000024346513,0.0000032533053,0.0005980426],"genre_scores_gemma":[0.99937785,0.00004528737,0.00015700357,0.00020354227,0.00018306887,4.4503903e-7,0.000009003063,0.0000051876627,0.000018596025],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99814373,0.000047202597,0.00067901216,0.0000883215,0.00093903637,0.000102680424],"domain_scores_gemma":[0.9982527,0.00020845135,0.001131076,0.00010207177,0.00025434766,0.00005133439],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011360634,0.00008651902,0.000122113,0.00008158486,0.000023995673,0.000009359318,0.0003722131,0.000055268225,0.00022903067],"category_scores_gemma":[0.00048685292,0.00005926838,0.000085593434,0.00016837215,0.00012656373,0.00023689149,0.00003603392,0.000116733725,0.000022812976],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023759523,0.0001885755,0.13134573,0.000005380698,0.000036294983,0.0000047638378,0.0006466282,0.005520095,0.85243493,0.00032463556,0.0015788713,0.0076764757],"study_design_scores_gemma":[0.0002883709,0.00009283297,0.5242313,0.00003417403,0.000008372673,0.0000052186083,0.00005194903,0.00012196517,0.47406116,0.0003207269,0.000729879,0.000054054988],"about_ca_topic_score_codex":0.0000779122,"about_ca_topic_score_gemma":0.000121868194,"teacher_disagreement_score":0.39288557,"about_ca_system_score_codex":0.00013309083,"about_ca_system_score_gemma":0.000032961987,"threshold_uncertainty_score":0.25077254},"labels":[],"label_agreement":null},{"id":"W2145403720","doi":"10.4141/cjss2012-012","title":"A rapid bioassay to screen soils for toxicity of residual petroleum hydrocarbons","year":2012,"lang":"en","type":"article","venue":"Canadian Journal of Soil Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"Petroleum Technology Alliance Canada","keywords":"Bioassay; Soil water; Petroleum; Environmental chemistry; Environmental remediation; Toxicity; Chemistry; Soil contamination; Pesticide; Environmental science; Residual; Contamination; Ecology; Biology; Soil science; Organic chemistry","score_opus":0.017930294653225574,"score_gpt":0.22849531037010848,"score_spread":0.2105650157168829,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145403720","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947905,0.000057636596,0.00017401413,0.0012134786,0.0003626579,0.000105208026,0.000056969297,0.0000024817775,0.0032370652],"genre_scores_gemma":[0.9977146,0.0000050480526,0.0015214432,0.00052926503,0.000114152404,6.246985e-7,5.9554066e-7,0.000005090857,0.000109189925],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985519,0.000026947417,0.0003186599,0.0001383047,0.00039217106,0.00057202636],"domain_scores_gemma":[0.9981732,0.00003604767,0.00020826253,0.00014460075,0.000042859145,0.0013950653],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018582754,0.000092430906,0.0001557246,0.00021293403,0.00018898354,0.00003733154,0.00057695346,0.000044929646,0.00037517503],"category_scores_gemma":[0.00039258445,0.000076454926,0.00006527853,0.00056565343,0.00061154197,0.0004332164,0.000041418203,0.000084422485,0.000047881244],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003511739,0.000052519725,0.20379576,0.00000567385,0.000009756111,0.000004337209,0.0012650662,0.00020050198,0.76692694,0.00014627252,0.017725686,0.009832345],"study_design_scores_gemma":[0.00060446543,0.00052785693,0.45656306,0.000053793174,0.000026539992,0.000059552356,0.00039905828,0.00021360823,0.51359403,0.00012251409,0.027485281,0.00035023424],"about_ca_topic_score_codex":0.0054025245,"about_ca_topic_score_gemma":0.039100103,"teacher_disagreement_score":0.25333294,"about_ca_system_score_codex":0.00030801177,"about_ca_system_score_gemma":0.0005792823,"threshold_uncertainty_score":0.9784338},"labels":[],"label_agreement":null},{"id":"W2145473801","doi":"10.1128/aem.72.1.491-496.2006","title":"Aerobic Biodegradation of 2,2′-Dithiodibenzoic Acid Produced from Dibenzothiophene Metabolites","year":2006,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Directorate for Biological Sciences; University of Alberta","keywords":"Dibenzothiophene; Biodegradation; Benzoic acid; Chemistry; Sulfur; Metabolite; Biochemistry; Enrichment culture; Organic chemistry; Bacteria; Nuclear chemistry; Biology","score_opus":0.003198416966423988,"score_gpt":0.15189568396275838,"score_spread":0.1486972669963344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145473801","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99808794,0.00030589188,0.000035953504,0.00008970743,0.00009766668,0.0002450581,0.00031331705,0.000026080563,0.00079840526],"genre_scores_gemma":[0.9968777,0.00009905522,0.001429096,0.00020268689,0.000055006534,0.000007603878,0.0012121575,0.0000139322865,0.000102771555],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988125,0.00003857439,0.00034457378,0.00047652144,0.00007189542,0.0002559281],"domain_scores_gemma":[0.9995383,0.000026354599,0.00017436242,0.00020754263,0.0000012519464,0.00005216264],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009768654,0.00021397555,0.00025937267,0.000033523014,0.000081981416,0.0000109936045,0.00014448464,0.00015089518,0.0019240377],"category_scores_gemma":[0.0000029236824,0.00018321924,0.00004626647,0.000089307396,0.00044774442,0.00007016125,0.00016239523,0.00009001854,0.00034767823],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025186646,0.000120043915,0.022867776,0.0000030775168,0.000013120073,4.8287313e-7,0.00006314049,0.000008093206,0.9743063,0.000074556,0.00058781414,0.0019304081],"study_design_scores_gemma":[0.0005329037,0.000032981407,0.08214337,0.00000242249,0.000026220128,0.000004889318,0.000054463755,0.0000060654706,0.9106864,0.000305922,0.0060034087,0.00020096966],"about_ca_topic_score_codex":0.00033407402,"about_ca_topic_score_gemma":0.00006147939,"teacher_disagreement_score":0.06361991,"about_ca_system_score_codex":0.000054705568,"about_ca_system_score_gemma":0.0000038781764,"threshold_uncertainty_score":0.99898833},"labels":[],"label_agreement":null},{"id":"W2145483664","doi":"10.1128/genomea.00909-15","title":"Draft Genome Sequence of Acinetobacter calcoaceticus Strain GK1, a Hydrocarbon-Degrading Plant Growth-Promoting Rhizospheric Bacterium","year":2015,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Thompson Rivers University","funders":"Universiteit Hasselt","keywords":"Acinetobacter calcoaceticus; Biology; Bacteria; Strain (injury); Whole genome sequencing; Genome; Phytoremediation; Botany; Acinetobacter; Microbiology; Contamination; Gene; Ecology; Genetics","score_opus":0.03143931980774773,"score_gpt":0.22751259215174785,"score_spread":0.19607327234400013,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145483664","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99304765,0.00006133397,0.00008458235,0.000160903,0.00035051367,0.00040677268,0.0009297791,0.0000518676,0.004906565],"genre_scores_gemma":[0.99718034,0.0000438528,0.0010370694,0.0003510381,0.000085512416,0.000008846393,0.0006098511,0.000026114914,0.0006573624],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.997577,0.00007265805,0.00057553005,0.00052546646,0.0006231712,0.00062616833],"domain_scores_gemma":[0.9989686,0.000013507918,0.00031827728,0.00032287542,0.000046353554,0.00033036777],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00056149124,0.0003048709,0.0003257928,0.000049589096,0.00009244309,0.000057844147,0.00046961106,0.000113257316,0.0011283719],"category_scores_gemma":[0.000044954046,0.0002742576,0.00007694264,0.00044900377,0.00017955728,0.00031098328,0.00028355687,0.00015149161,0.00061584654],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034118682,0.00009158456,0.027689697,0.000021611642,0.000028420696,0.000017607785,0.001924327,0.00003905688,0.9696183,0.0000054724983,0.00020077542,0.00032902314],"study_design_scores_gemma":[0.014369816,0.004412836,0.4750288,0.00047255046,0.00044244697,0.00033307815,0.0046498002,0.004656944,0.15025985,0.001079415,0.33728567,0.0070088087],"about_ca_topic_score_codex":0.00039040003,"about_ca_topic_score_gemma":0.00006238048,"teacher_disagreement_score":0.81935847,"about_ca_system_score_codex":0.00044379782,"about_ca_system_score_gemma":0.00006059684,"threshold_uncertainty_score":0.999971},"labels":[],"label_agreement":null},{"id":"W2146418885","doi":"10.1017/s0032247403002985","title":"Contaminants in the Arctic and the Antarctic: a comparison of sources, impacts, and remediation options","year":2003,"lang":"en","type":"article","venue":"Polar Record","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":122,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Military College of Canada; Queen's University","funders":"","keywords":"Arctic; Biota; Indigenous; Biodiversity; Arctic ecology; Antarctic treaty; Population; Geography; Environmental science; Ecology; Physical geography; Environmental protection; Biology","score_opus":0.013602169668202801,"score_gpt":0.24495072130226625,"score_spread":0.23134855163406345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146418885","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983461,0.00036543983,0.000016369644,0.0006517689,0.000049628274,0.00022459077,0.000005760052,0.00000299104,0.0003373392],"genre_scores_gemma":[0.9989524,0.00059983815,0.00020259908,0.00020779345,0.0000074054665,0.0000022234549,0.0000027155588,0.0000028341587,0.000022181508],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992577,0.00022523785,0.00018073237,0.000103830025,0.000119528566,0.00011299189],"domain_scores_gemma":[0.9996112,0.00015086686,0.00010052584,0.00010192061,0.000004767487,0.00003072202],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006859288,0.000062226005,0.000108703956,0.000018741299,0.00007941554,0.000022731865,0.00007444334,0.00003234274,0.00013526063],"category_scores_gemma":[0.00020691454,0.000033918855,0.00001614717,0.00013536881,0.0002289484,0.00007322588,0.000024311186,0.000094475625,0.000012912156],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026932892,0.000040454357,0.9868016,0.000007893364,0.0000031916013,2.745111e-7,0.0026619541,0.0000011327819,0.0072093406,0.00017401128,0.00015363969,0.002919579],"study_design_scores_gemma":[0.0009832676,0.000059275455,0.987665,0.00001688121,0.000017277798,0.00001127278,0.001243154,0.00021032056,0.001583583,0.00022847849,0.007907438,0.000074044205],"about_ca_topic_score_codex":0.0015556194,"about_ca_topic_score_gemma":0.0037353006,"teacher_disagreement_score":0.0077537987,"about_ca_system_score_codex":0.000026627624,"about_ca_system_score_gemma":0.0000057645925,"threshold_uncertainty_score":0.23516417},"labels":[],"label_agreement":null},{"id":"W2147352039","doi":"10.1139/gen-2013-0069","title":"Metagenomic analysis of an anaerobic alkane-degrading microbial culture: potential hydrocarbon-activating pathways and inferred roles of community members","year":2013,"lang":"en","type":"article","venue":"Genome","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Ontario Genomics; University of Alberta","funders":"Genome Alberta; Syncrude; Genome Canada","keywords":"Biology; Metagenomics; Deltaproteobacteria; Pyrosequencing; Enrichment culture; Operon; Microbiology; 16S ribosomal RNA; Genetics; Biochemistry; Gene; Bacteria; Gammaproteobacteria; Escherichia coli","score_opus":0.012945514839525487,"score_gpt":0.20886574693020749,"score_spread":0.195920232090682,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147352039","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992967,0.000046984682,0.000036435486,0.000017153257,0.000031923984,0.00017342546,0.000063405736,0.000017056362,0.00031690634],"genre_scores_gemma":[0.9983232,0.000028133614,0.0014346335,0.00006659867,0.000011921392,0.0000018622067,0.00010196184,0.000009785691,0.000021897538],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99890196,0.00017904984,0.0003757041,0.00018054566,0.00015661062,0.00020615247],"domain_scores_gemma":[0.999285,0.000024933956,0.00029096223,0.0002741614,0.000016992873,0.00010795878],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00030760464,0.00015424717,0.0003445273,0.00012055043,0.00013350835,0.000030058949,0.00025366704,0.0000869536,0.00096469425],"category_scores_gemma":[0.000023179107,0.00013640779,0.000108053646,0.0004900659,0.000204612,0.0002362894,0.00018258808,0.00014102632,0.000013208344],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011672205,0.00006790089,0.0021154718,0.0000075145003,0.00017727245,4.11378e-7,0.003659892,0.0011042877,0.99162793,0.0000020405398,0.000011155166,0.0012144774],"study_design_scores_gemma":[0.00069879857,0.00020195119,0.6280985,0.000008130558,0.00049623055,0.0000051585607,0.0030937244,0.0037841944,0.36293676,0.000068373905,0.00018491247,0.0004232743],"about_ca_topic_score_codex":0.0028209153,"about_ca_topic_score_gemma":0.00085112505,"teacher_disagreement_score":0.62869114,"about_ca_system_score_codex":0.000062312014,"about_ca_system_score_gemma":0.000008502188,"threshold_uncertainty_score":0.99994856},"labels":[],"label_agreement":null},{"id":"W2148180351","doi":"10.1128/jb.183.5.1511-1516.2001","title":"Comparative Specificities of Two Evolutionarily Divergent Hydrolases Involved in Microbial Degradation of Polychlorinated Biphenyls","year":2001,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; European Commission","keywords":"Hydrolysis; Hydrolase; Moiety; Biphenyl; Biology; Stereochemistry; Enzyme; Enzyme kinetics; Serine hydrolase; Biochemistry; Catalytic triad; Rhodococcus; Chemistry; Serine; Active site; Organic chemistry","score_opus":0.030222906007933734,"score_gpt":0.25477610931176325,"score_spread":0.22455320330382952,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2148180351","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991291,0.000057902285,0.00005367249,0.000111668276,0.0003214527,0.000076537915,0.000023664794,0.0000021426972,0.00022384609],"genre_scores_gemma":[0.99916714,0.00016494423,0.0005149519,0.000034777346,0.00003737097,2.674699e-7,0.000010816634,0.0000029468306,0.00006675224],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988615,0.00012369548,0.00065980124,0.000094506046,0.00012991113,0.00013059643],"domain_scores_gemma":[0.9991201,0.00005075954,0.0006669569,0.00006892985,0.000049522532,0.00004373328],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00023092469,0.00009154128,0.0003498565,0.00012793996,0.000021284897,0.0000035397084,0.00015631314,0.00005935294,0.001386359],"category_scores_gemma":[0.00003084723,0.00007496436,0.00007066931,0.00021677055,0.00025861512,0.00016142106,0.00005598398,0.00009932375,0.000016756127],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030112732,0.00012620841,0.2566813,0.0000026381367,0.000013913655,0.0000055181235,0.00025859458,0.00020665611,0.74200374,0.000016578062,0.0002602594,0.00012350037],"study_design_scores_gemma":[0.0012452367,0.00040177515,0.7725987,0.000032867683,0.000013703063,0.000048162634,0.00027629474,0.00010316509,0.22357215,0.00010376708,0.0015048358,0.00009936309],"about_ca_topic_score_codex":0.00030793514,"about_ca_topic_score_gemma":0.00044391473,"teacher_disagreement_score":0.5184316,"about_ca_system_score_codex":0.00013202114,"about_ca_system_score_gemma":0.000031464373,"threshold_uncertainty_score":0.9995265},"labels":[],"label_agreement":null},{"id":"W2148454982","doi":"10.1177/1091581813504229","title":"Toxicological Assessment of Refined Naphthenic Acids in a Repeated Dose/Developmental Toxicity Screening Test","year":2013,"lang":"en","type":"article","venue":"International Journal of Toxicology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Alberta","keywords":"Toxicity; Developmental toxicity; Offspring; Physiology; Micronucleus test; Reproductive toxicity; Toxicology; Micronucleus; Biology; Genotoxicity; In vivo; Pharmacology; Pregnancy; Internal medicine; Fetus; Medicine; Biotechnology","score_opus":0.018163157074635592,"score_gpt":0.28616659513049003,"score_spread":0.2680034380558544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2148454982","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942527,0.0000055595706,0.0002097281,0.0020449616,0.00033622564,0.00013864855,0.000009683415,0.0000070096426,0.00299552],"genre_scores_gemma":[0.985871,0.000020927668,0.013120558,0.0007605532,0.000049421793,0.0000022591348,0.000004601767,0.0000056684808,0.00016499135],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99825007,0.00010971262,0.0008075782,0.00016740478,0.00046954493,0.00019571216],"domain_scores_gemma":[0.9990113,0.00018595252,0.0005348294,0.000068139845,0.0001069622,0.00009286216],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00054332113,0.00012004575,0.00025349794,0.00015947265,0.000023520684,0.00002351573,0.00052636414,0.00013563171,0.009560212],"category_scores_gemma":[0.00041593274,0.0000948735,0.000091791626,0.0001831867,0.0001516189,0.00024668392,0.00022677473,0.0002504032,0.00006102828],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051450595,0.00036848552,0.35232788,9.388376e-7,0.000028907956,0.000038634786,0.00006653903,0.00009624886,0.6410281,0.000016110467,0.00094993104,0.0050267726],"study_design_scores_gemma":[0.0012979968,0.00045763224,0.95963204,0.000025091435,0.0000052118107,0.00017345471,0.00008453442,0.00047395998,0.036345776,0.00012011554,0.0012751613,0.00010902766],"about_ca_topic_score_codex":0.00006812449,"about_ca_topic_score_gemma":0.00015713545,"teacher_disagreement_score":0.60730416,"about_ca_system_score_codex":0.0004656767,"about_ca_system_score_gemma":0.00007299975,"threshold_uncertainty_score":0.99134517},"labels":[],"label_agreement":null},{"id":"W2149580264","doi":"10.1099/00221287-147-8-2157","title":"Comamonas testosteroni BR6020 possesses a single genetic locus for extradiol cleavage of protocatechuate The GenBank accession number for the sequence reported in this paper is AF305325.","year":2001,"lang":"en","type":"article","venue":"Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada; Deutsche Forschungsgemeinschaft; Alexander von Humboldt-Stiftung","keywords":"Comamonas testosteroni; Biochemistry; Enzyme; Chemistry; Biology; Stereochemistry","score_opus":0.04944229701339916,"score_gpt":0.2896136050963828,"score_spread":0.24017130808298362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149580264","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99209684,0.00013638765,0.00054319407,0.0023631642,0.00014149286,0.0040382803,0.00012217432,0.000023862782,0.0005345937],"genre_scores_gemma":[0.9963994,0.000099221375,0.00090542884,0.0016511789,0.000031229385,0.00025234531,0.000034269815,0.0000176467,0.0006092745],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998622,0.00009141443,0.00048653534,0.00038263874,0.00005486677,0.00036256836],"domain_scores_gemma":[0.99902636,0.00024600787,0.00029214134,0.00037469552,0.000027820093,0.000032987395],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00038168018,0.00017803616,0.00021125232,0.00001994424,0.0001472196,0.000024707746,0.0004735368,0.00015980122,0.0016018014],"category_scores_gemma":[0.00008257324,0.00009980957,0.00008409299,0.00022356409,0.00043065698,0.00008578514,0.00012197363,0.00010737768,0.0000759401],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012333367,0.00009465467,0.025718924,0.000015760565,0.00001281191,0.000004081484,0.00026827314,0.0000100033585,0.9578984,0.000002349541,0.009906665,0.005944752],"study_design_scores_gemma":[0.0011063212,0.00029080262,0.026249764,0.00003725606,0.000038433758,0.00025768424,0.00009479064,0.00021150024,0.83796066,0.00019576438,0.133276,0.00028104035],"about_ca_topic_score_codex":0.00041352658,"about_ca_topic_score_gemma":0.00079594494,"teacher_disagreement_score":0.12336934,"about_ca_system_score_codex":0.000092447175,"about_ca_system_score_gemma":0.000029460203,"threshold_uncertainty_score":0.99931085},"labels":[],"label_agreement":null},{"id":"W2150575101","doi":"10.1007/s00253-002-1024-6","title":"Biotechnology and bioremediation: successes and limitations","year":2002,"lang":"en","type":"review","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":521,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Bioremediation; Biodegradation; Pollutant; DNA shuffling; Biochemical engineering; Environmental chemistry; Biotransformation; Biotechnology; Environmental remediation; Environmental science; Bioavailability; Chemistry; Contamination; Biology; Directed evolution; Ecology; Organic chemistry; Enzyme; Biochemistry; Engineering","score_opus":0.024170275781786536,"score_gpt":0.23539649745121402,"score_spread":0.21122622166942748,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150575101","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0023795932,0.9933321,0.000028287614,0.0021656053,0.00017307421,0.00083867816,0.00013830549,0.0002473068,0.0006970788],"genre_scores_gemma":[0.0045141275,0.9938077,0.0010245765,0.00026251678,0.000034269862,0.00003799013,0.00017534892,0.000029041903,0.00011446774],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978746,0.0000666661,0.0005301744,0.0010170824,0.000041275423,0.00047020585],"domain_scores_gemma":[0.9989758,0.00024217828,0.0003398548,0.0003404926,0.0000069566017,0.00009469231],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00017258074,0.00052329793,0.0010547538,0.0003142725,0.0002394593,0.00003175472,0.00030126094,0.0028882613,0.00023589616],"category_scores_gemma":[0.00008146606,0.0004176662,0.00006141521,0.0005024283,0.0027077708,0.000051253806,0.00074914773,0.000641034,0.00034747017],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000417306,0.000039661376,0.00002637308,0.00040678223,0.00006260846,0.000006134222,0.000030921477,2.212987e-8,0.03167923,0.0025830367,0.0013494681,0.9638116],"study_design_scores_gemma":[0.00026218506,0.00008923461,0.00001792002,0.00010581685,0.00019537463,0.00045897314,0.00003375055,0.0000011365723,0.002155311,0.00015456142,0.99606246,0.00046330647],"about_ca_topic_score_codex":0.000014910088,"about_ca_topic_score_gemma":0.00016493328,"teacher_disagreement_score":0.99471295,"about_ca_system_score_codex":0.000054085907,"about_ca_system_score_gemma":0.000017980738,"threshold_uncertainty_score":0.9998275},"labels":[],"label_agreement":null},{"id":"W2150817751","doi":"10.1128/genomea.00890-15","title":"Insights into the Hydrocarbon Tolerance of Two <i>Devosia</i> Isolates, <i>D. chinhatensis</i> Strain IPL18 <sup>T</sup> and <i>D. geojensis</i> Strain BD-c194 <sup>T</sup> , via Whole-Genome Sequence Analysis","year":2015,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Strain (injury); Bioremediation; Hydrocarbon; Biology; Bacteria; Chemistry; Genetics; Organic chemistry","score_opus":0.015567803034282702,"score_gpt":0.22797306881629922,"score_spread":0.21240526578201652,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150817751","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99310315,0.0012500529,0.00047025838,0.0007062449,0.00014096012,0.0009822214,0.0014558092,0.000088696914,0.0018026339],"genre_scores_gemma":[0.9936654,0.00047683952,0.0007191304,0.0029172264,0.0001383743,0.000027615672,0.0014035725,0.000052428368,0.0005994447],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99482906,0.00036352416,0.001236725,0.0013275592,0.0012498157,0.0009933243],"domain_scores_gemma":[0.9975099,0.000067485074,0.0006013628,0.0010855475,0.00015369429,0.0005820312],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001139235,0.00076066516,0.00090267556,0.00022199561,0.0004402206,0.00019098459,0.0010666115,0.00023740066,0.00032332784],"category_scores_gemma":[0.0000566698,0.0006017287,0.00026111177,0.0021294823,0.00085641013,0.0006883945,0.0006310481,0.00043465622,0.00038918044],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001043052,0.00026836724,0.012587517,0.000032034677,0.00044611032,0.000024437853,0.014020944,0.05259847,0.91727185,0.000019958832,0.00058197393,0.0020440188],"study_design_scores_gemma":[0.01728752,0.0029586356,0.052392703,0.00025953265,0.0037833436,0.00014571274,0.010483073,0.32742986,0.018552005,0.005500661,0.5532218,0.007985139],"about_ca_topic_score_codex":0.0015511882,"about_ca_topic_score_gemma":0.0005261405,"teacher_disagreement_score":0.89871985,"about_ca_system_score_codex":0.00041692719,"about_ca_system_score_gemma":0.0001123006,"threshold_uncertainty_score":0.9996434},"labels":[],"label_agreement":null},{"id":"W2150929242","doi":"10.1111/1462-2920.13121","title":"Cultivating microbial dark matter in benzene‐degrading methanogenic consortia","year":2015,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Ontario Genomics Institute; Government of Canada; Government of Ontario; Joint Genome Institute; Genome Canada; U.S. Department of Energy","keywords":"Biology; Metagenomics; 16S ribosomal RNA; Pyrosequencing; Population; Microbiology; Bacteria; Biochemistry; Genetics; Gene","score_opus":0.013595392016209759,"score_gpt":0.21319109088074822,"score_spread":0.19959569886453846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150929242","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946056,0.00008462124,0.00002396759,0.00026494017,0.00035105902,0.000292291,0.00009244095,0.000028549592,0.0042565367],"genre_scores_gemma":[0.99561864,0.000015108836,0.0017346969,0.0014638696,0.000042164498,0.000007049756,0.00018109447,0.000027434357,0.00090994174],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980568,0.0002076311,0.0004739244,0.0005990963,0.00009407445,0.0005684691],"domain_scores_gemma":[0.99937886,0.000040527968,0.00015823188,0.00024892908,0.0000016988538,0.0001717653],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003926388,0.0002822985,0.0002865664,0.00007427335,0.000071178896,0.000019860558,0.0003170817,0.00021177188,0.0070941094],"category_scores_gemma":[0.000026138183,0.00026516282,0.00008296761,0.00016507585,0.0003851514,0.00015813857,0.00038650027,0.00024005317,0.008672069],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025536341,0.00007704078,0.30299684,0.0000012766349,0.00000726703,0.000008725982,0.00029384965,0.00003263319,0.6845688,0.0000011625744,0.01170156,0.0002853243],"study_design_scores_gemma":[0.0036776795,0.00019646087,0.17217354,0.000028339071,0.000031136035,0.00035747045,0.00079017767,0.000034699933,0.76042473,0.00014373651,0.060983695,0.0011583427],"about_ca_topic_score_codex":0.00015192368,"about_ca_topic_score_gemma":0.00014521572,"teacher_disagreement_score":0.13082328,"about_ca_system_score_codex":0.0006048202,"about_ca_system_score_gemma":0.000013303856,"threshold_uncertainty_score":0.99998003},"labels":[],"label_agreement":null},{"id":"W2152183514","doi":"10.1139/l09-130","title":"Management of hydrocarbon-contaminated soil through bioremediation and landfill disposal at a remote location in Northern CanadaA paper submitted to the Journal of Environmental Engineering and Science.","year":2010,"lang":"en","type":"article","venue":"Canadian Journal of Civil Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Royal Military College of Canada","funders":"","keywords":"Environmental science; Bioremediation; Leachate; Soil contamination; Waste management; Environmental engineering; Contamination; Petroleum; Total petroleum hydrocarbon; Microcosm; Soil water; Environmental chemistry; Geology; Soil science; Engineering; Chemistry","score_opus":0.002280892125935977,"score_gpt":0.15193463587752415,"score_spread":0.14965374375158816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152183514","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990612,0.00012157058,0.00019549018,0.00022241897,0.0002513539,0.000089814224,0.000007144016,0.0000013223186,0.00004962976],"genre_scores_gemma":[0.99958456,0.00006798629,0.00026956078,0.000029619156,0.000031628682,1.6110619e-7,0.0000010283453,0.0000084510675,0.000007035024],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99912494,0.000010319191,0.0003292239,0.00008475311,0.00024888982,0.00020186993],"domain_scores_gemma":[0.9994648,0.00001996834,0.0001573248,0.00008205389,0.000019939656,0.00025591798],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055416866,0.00009757094,0.00012954349,0.00016372337,0.000045963432,0.000017848019,0.00017196796,0.000040995772,0.000067933746],"category_scores_gemma":[0.0000575021,0.00007724568,0.00001798238,0.00030694343,0.00009265218,0.00022023632,0.00003566632,0.00016407881,0.0000011138529],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024450992,0.000012009548,0.09663602,0.000031039355,0.000026877779,0.0000516529,0.0023690064,0.030145694,0.8670291,0.00000891083,0.000069297705,0.0035959964],"study_design_scores_gemma":[0.00064976956,0.000097396194,0.9721429,0.0001220964,0.00003191195,0.00016003454,0.00023124786,0.0096621625,0.014988964,0.000005305233,0.0017380985,0.0001701341],"about_ca_topic_score_codex":0.0034015318,"about_ca_topic_score_gemma":0.55109143,"teacher_disagreement_score":0.8755069,"about_ca_system_score_codex":0.00030953682,"about_ca_system_score_gemma":0.000079001715,"threshold_uncertainty_score":0.51421213},"labels":[],"label_agreement":null},{"id":"W2152282785","doi":"10.1098/rstb.2012.0318","title":"Identification of <i>Dehalobacter</i> reductive dehalogenases that catalyse dechlorination of chloroform, 1,1,1-trichloroethane and 1,1-dichloroethane","year":2013,"lang":"en","type":"article","venue":"Philosophical Transactions of the Royal Society B Biological Sciences","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":89,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Chloroform; Chemistry; Amino acid; Chromatography; Corrinoid; Polyacrylamide gel electrophoresis; Tandem mass spectrometry; Biochemistry; Biology; Mass spectrometry; Enzyme","score_opus":0.031006460931070096,"score_gpt":0.2411298178509493,"score_spread":0.2101233569198792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152282785","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99624544,0.000077283126,0.00073092565,0.0020972542,0.00012288468,0.0004044135,0.00007223781,0.000016583896,0.00023297014],"genre_scores_gemma":[0.9991747,0.0001937066,0.0004909248,0.000066974986,0.000020171412,0.000014016716,0.0000047486287,0.0000037106129,0.000031010924],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99835026,0.00009960552,0.0005160878,0.00035581546,0.0004520917,0.00022615083],"domain_scores_gemma":[0.9990109,0.00019906707,0.0004337043,0.00019734657,0.000065593544,0.0000933537],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.000605086,0.00015677644,0.00026884678,0.000025233823,0.00021586221,0.00001574282,0.00048788261,0.00017324193,0.000529932],"category_scores_gemma":[0.00012440124,0.00009127253,0.00024524223,0.0006380813,0.003047537,0.00023188269,0.00008425015,0.00014960355,0.00001129919],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042742886,0.00042803172,0.061750796,0.000035940026,0.00004667423,8.045489e-8,0.0004351605,0.00039201116,0.93231356,0.00029933627,0.000048771075,0.0042068786],"study_design_scores_gemma":[0.00027749987,0.000262808,0.22689855,0.00001994713,0.00004496676,0.0000031629484,0.00032203132,0.0010419462,0.7640244,0.006928993,0.000014662746,0.00016102723],"about_ca_topic_score_codex":0.0005029385,"about_ca_topic_score_gemma":0.000010123708,"teacher_disagreement_score":0.16828917,"about_ca_system_score_codex":0.00004755049,"about_ca_system_score_gemma":0.000017919887,"threshold_uncertainty_score":0.9996656},"labels":[],"label_agreement":null},{"id":"W2152733191","doi":"10.1080/15320380600646332","title":"Bioremediation of Diesel Fuel Contaminated Soil: Comparison of Individual Compounds to Complex Mixtures","year":2006,"lang":"en","type":"article","venue":"Soil and Sediment Contamination An International Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Bioremediation; Biodegradation; Degradation (telecommunications); Hydrocarbon; Environmental chemistry; Soil contamination; Chemistry; Contamination; Microbial biodegradation; Biostimulation; Diesel fuel; Population; Total petroleum hydrocarbon; Soil water; Microorganism; Environmental science; Bacteria; Organic chemistry; Biology; Ecology; Soil science","score_opus":0.01841812748690876,"score_gpt":0.2760655084148639,"score_spread":0.25764738092795514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152733191","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964964,0.000028014189,0.0005607151,0.00067591225,0.00047453668,0.00015023391,0.000117934615,0.000014223886,0.0014820626],"genre_scores_gemma":[0.99866897,0.00002791573,0.000462472,0.00029663247,0.00013084733,0.0000022142403,0.00028171853,0.000008096812,0.000121132354],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9979436,0.00010051244,0.00067859987,0.00019331582,0.0009254047,0.00015861531],"domain_scores_gemma":[0.998989,0.00005388316,0.0005217427,0.000083763705,0.00023133014,0.00012026841],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049096823,0.00014688967,0.00023050891,0.0002007955,0.00008374796,0.000080603444,0.00033038895,0.00007861195,0.00056088006],"category_scores_gemma":[0.00004666638,0.00013163661,0.00005760196,0.00015001112,0.00016258049,0.00033414873,0.00010913792,0.00011803013,0.0000123534055],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018496127,0.0007445087,0.40919152,0.0000124581575,0.00008155701,0.0000036081574,0.0027712896,0.0005573194,0.5625057,0.0006033158,0.0059353947,0.01740832],"study_design_scores_gemma":[0.0015969418,0.0003493457,0.910963,0.000027618627,0.00002888143,0.000013627109,0.0005665984,0.0023919411,0.0811519,0.00023290748,0.0025013094,0.0001759315],"about_ca_topic_score_codex":0.0003064186,"about_ca_topic_score_gemma":0.00059500674,"teacher_disagreement_score":0.50177145,"about_ca_system_score_codex":0.00012777258,"about_ca_system_score_gemma":0.00002325296,"threshold_uncertainty_score":0.6141243},"labels":[],"label_agreement":null},{"id":"W2152762034","doi":"10.1128/aem.01362-10","title":"Identification and Characterization of a Novel CprA Reductive Dehalogenase Specific to Highly Chlorinated Phenols from <i>Desulfitobacterium hafniense</i> Strain PCP-1","year":2010,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Armand Frappier Museum; Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Pentachlorophenol; Corrinoid; Chemistry; Cofactor; Phenols; Chlorophenol; Reductive dechlorination; Dehalogenase; Molecular mass; Polyacrylamide gel electrophoresis; Halogenation; Oxidoreductase; Biochemistry; Chromatography; Stereochemistry; Enzyme; Organic chemistry; Phenol; Biodegradation","score_opus":0.005763426543278567,"score_gpt":0.17422806671921165,"score_spread":0.16846464017593307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152762034","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99672097,0.000006293874,0.00015050468,0.00019747046,0.00023126404,0.00041026314,0.002196083,0.000017469254,0.000069691945],"genre_scores_gemma":[0.9974946,0.00007194913,0.0007092987,0.00019968998,0.000054150354,0.000012249969,0.0013897541,0.000015166041,0.00005317525],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988503,0.00001941801,0.0003204699,0.00052810623,0.000059353424,0.00022235869],"domain_scores_gemma":[0.99948204,0.000021115886,0.0001730336,0.00020173591,0.0000029106582,0.00011913872],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011599043,0.00019437364,0.00020237041,0.000039271246,0.00008398095,0.000022466846,0.00012765535,0.00016343303,0.00051767903],"category_scores_gemma":[0.0000041831763,0.00018421635,0.000022730352,0.000090599206,0.0004520514,0.00009162159,0.00017595197,0.00012707003,0.00013149163],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000068366666,0.0001746477,0.0020994926,0.0000025168388,0.000011287082,5.558004e-7,0.00042487343,0.000001023379,0.9935592,0.000041654122,0.000048310692,0.0035680851],"study_design_scores_gemma":[0.00053364126,0.000047669608,0.20242408,0.0000026242178,0.000009378833,0.000012081599,0.00010908662,0.0000056035265,0.792504,0.00002136989,0.0041468334,0.00018358932],"about_ca_topic_score_codex":0.000038052058,"about_ca_topic_score_gemma":0.000027025626,"teacher_disagreement_score":0.20105515,"about_ca_system_score_codex":0.000045531215,"about_ca_system_score_gemma":0.0000035029755,"threshold_uncertainty_score":0.7512125},"labels":[],"label_agreement":null},{"id":"W2153188372","doi":"10.1002/bit.21674","title":"Biodegradation of PCBs in two‐phase partitioning bioreactors following solid extraction from soil","year":2007,"lang":"en","type":"article","venue":"Biotechnology and Bioengineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Biodegradation; Bioreactor; Chemistry; Extraction (chemistry); Polymer; Chromatography; Solid phase extraction; Contamination; Environmental remediation; Soil contamination; Microbial consortium; Soil water; Environmental chemistry; Microorganism; Organic chemistry; Environmental science; Bacteria","score_opus":0.008251212669540724,"score_gpt":0.2655529692931477,"score_spread":0.257301756623607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153188372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954205,0.000100667276,0.003942566,0.00014739312,0.00017900167,0.000074020616,0.000010206549,0.00006985792,0.000055747158],"genre_scores_gemma":[0.9982018,0.00006730307,0.0016663683,0.000015383193,0.000016490316,9.0237864e-7,0.000022634373,0.00000562025,0.0000035250857],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999298,0.00000734235,0.00024283705,0.00018984932,0.000077471625,0.00018449925],"domain_scores_gemma":[0.9997467,0.000028422775,0.00009435424,0.00009227177,0.0000026211571,0.00003565351],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023148448,0.000096482836,0.00011700816,0.00013570482,0.00003603209,0.0000072755724,0.00006488476,0.0001667712,0.00007967623],"category_scores_gemma":[0.000036831825,0.00009264908,0.000028323058,0.00029555598,0.00007854451,0.0001314069,0.00004330453,0.00012521802,0.00001359595],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013492433,0.00004226174,0.04735727,0.0000022577033,0.000006880131,0.000004870997,0.000049261394,0.000097347656,0.93592644,0.000041234132,0.000005394466,0.016453275],"study_design_scores_gemma":[0.00056652736,0.00003463169,0.066042125,0.000023997218,0.000008358223,0.0000025470167,0.00008360739,0.0016584031,0.9312313,0.000022840708,0.00021553863,0.00011012337],"about_ca_topic_score_codex":0.00050001213,"about_ca_topic_score_gemma":0.0007685903,"teacher_disagreement_score":0.01868486,"about_ca_system_score_codex":0.000053349384,"about_ca_system_score_gemma":0.0000031553568,"threshold_uncertainty_score":0.377812},"labels":[],"label_agreement":null},{"id":"W2154086974","doi":"10.1128/aem.67.6.2669-2676.2001","title":"Induction of <i>bphA</i> , Encoding Biphenyl Dioxygenase, in Two Polychlorinated Biphenyl-Degrading Bacteria, Psychrotolerant <i>Pseudomonas</i> Strain Cam-1 and Mesophilic <i>Burkholderia</i> Strain LB400","year":2001,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biphenyl; Biology; Dioxygenase; Pseudomonas; Bacteria; Mesophile; Strain (injury); Burkholderia; Microbiology; Biochemistry; Chemistry; Enzyme","score_opus":0.008695076937325049,"score_gpt":0.2072922869178927,"score_spread":0.19859720998056765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154086974","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975709,0.00020775382,0.00001840986,0.00016500168,0.00017268484,0.00058038125,0.00042291306,0.000029654324,0.0008323367],"genre_scores_gemma":[0.9976391,0.001030999,0.00041547028,0.00046785624,0.00006104332,0.000021313399,0.00028104018,0.000028666584,0.000054520817],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99797946,0.00008695621,0.0005533118,0.0007343606,0.00010499181,0.0005408877],"domain_scores_gemma":[0.99935025,0.00004029656,0.00022916598,0.00022014132,0.0000016071598,0.00015854172],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003214323,0.00038290818,0.00045339868,0.00011149784,0.00013070449,0.000024198864,0.00018356729,0.00020224144,0.0008026957],"category_scores_gemma":[0.0000040038294,0.00035973723,0.000055427485,0.00024930242,0.0007126685,0.00015757326,0.00020906229,0.00024249805,0.000036665184],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010212306,0.00016618212,0.024037061,0.000012692774,0.000018452056,0.000008611214,0.0003627748,0.000014982809,0.9655606,0.000037048496,0.0000829858,0.009596466],"study_design_scores_gemma":[0.0068779625,0.0003069835,0.10821739,0.00007206849,0.000048498732,0.0005480577,0.0015833187,0.00007177441,0.86965793,0.00028722634,0.0111557515,0.0011730171],"about_ca_topic_score_codex":0.00029792017,"about_ca_topic_score_gemma":0.00023017326,"teacher_disagreement_score":0.09590267,"about_ca_system_score_codex":0.00012103179,"about_ca_system_score_gemma":0.000008466948,"threshold_uncertainty_score":0.99988544},"labels":[],"label_agreement":null},{"id":"W2154453217","doi":"10.1128/aem.70.1.174-181.2004","title":"Metabolism of 2,2′- and 3,3′-Dihydroxybiphenyl by the Biphenyl Catabolic Pathway of <i>Comamonas testosteroni</i> B-356","year":2004,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Comamonas testosteroni; Metabolite; Hydroxylation; Chemistry; Biphenyl; Catabolism; Metabolism; Enzyme; Substrate (aquarium); Stereochemistry; Biochemistry; Dioxygenase; Cometabolism; Biotransformation; Organic chemistry; Biology; Bacteria; Bioremediation","score_opus":0.0030418760939088974,"score_gpt":0.15551094845530386,"score_spread":0.15246907236139495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154453217","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997684,0.0009136848,0.00002227418,0.00016313871,0.00004243061,0.00026433577,0.0003613285,0.000009002043,0.0005398244],"genre_scores_gemma":[0.99852127,0.00051006896,0.00024156814,0.0005456807,0.000012866471,0.0000061946753,0.00009619004,0.000012863751,0.00005329102],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99901533,0.00002481061,0.00031471896,0.00032590967,0.00007118798,0.00024806656],"domain_scores_gemma":[0.99950844,0.00003476295,0.00017654916,0.00020676426,0.000001071439,0.00007244132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013316686,0.00019779567,0.00027480637,0.000020140862,0.0000860587,0.000005524009,0.0001842925,0.00012317664,0.00022495813],"category_scores_gemma":[0.0000029575904,0.00013812903,0.000037731457,0.00007457385,0.0013286235,0.000045439654,0.00029482626,0.00010600472,0.000040986997],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018561514,0.000101703015,0.0041664992,0.0000065078825,0.00001555051,3.223978e-7,0.00035418008,0.000008864194,0.9910085,0.00017964924,0.0002343131,0.003905314],"study_design_scores_gemma":[0.0014601692,0.000093295945,0.025309017,0.000005984805,0.000034761233,0.00005175574,0.00027957713,0.0000029964597,0.94494784,0.00038629406,0.027181411,0.00024688372],"about_ca_topic_score_codex":0.0002082919,"about_ca_topic_score_gemma":0.000032065826,"teacher_disagreement_score":0.04606068,"about_ca_system_score_codex":0.0000327656,"about_ca_system_score_gemma":0.0000061756195,"threshold_uncertainty_score":0.56327385},"labels":[],"label_agreement":null},{"id":"W2154496811","doi":"10.1002/etc.5620190827","title":"Assessment of 2,4,6-trinitrotoluene toxicity in field soils by pollution-induced community tolerance, denaturing gradient gel electrophoresis, and seed germination assay","year":2000,"lang":"en","type":"article","venue":"Environmental Toxicology and Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Trinitrotoluene; Temperature gradient gel electrophoresis; Environmental chemistry; Toxicity; Ecotoxicology; Soil water; Pollution; Germination; Chemistry; Chromatography; Biology; Botany; Ecology; Biochemistry; Explosive material","score_opus":0.004161286950346487,"score_gpt":0.21430846567670248,"score_spread":0.210147178726356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154496811","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976051,0.00008308792,0.000003303945,0.000116011404,0.000015996988,0.00015273332,0.00002318434,0.0000080579075,0.0019925504],"genre_scores_gemma":[0.99899197,0.00035708133,0.0000877088,0.00026557225,0.000009084474,0.000009722033,0.000023000002,0.000005533849,0.00025035348],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990874,0.00011321864,0.00023646907,0.00022395712,0.00012782094,0.00021111277],"domain_scores_gemma":[0.99964845,0.000057691144,0.000083344865,0.00013039893,9.053051e-7,0.000079184785],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00024965266,0.00013855561,0.00017136804,0.0000141250885,0.00013146935,0.000008226109,0.000105872845,0.00020350434,0.0016809123],"category_scores_gemma":[0.000011050354,0.0001423403,0.00002480036,0.00006346002,0.00018326563,0.00007755827,0.00008568043,0.0003358046,0.000005326934],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002835179,0.00027553464,0.12861726,0.000011742809,0.0000055225073,0.0000018191822,0.00007362045,0.00001149276,0.8682582,7.35875e-7,0.00005271455,0.002663012],"study_design_scores_gemma":[0.00037931654,0.000058212256,0.47079894,0.0000057638536,0.0000045662237,0.000007639403,0.000040844105,0.000103602746,0.52839434,0.000016611026,0.000101575606,0.00008857545],"about_ca_topic_score_codex":0.0000808689,"about_ca_topic_score_gemma":0.000048102807,"teacher_disagreement_score":0.34218168,"about_ca_system_score_codex":0.00019439962,"about_ca_system_score_gemma":0.0000068702875,"threshold_uncertainty_score":0.9992317},"labels":[],"label_agreement":null},{"id":"W2155335998","doi":"10.1002/cbic.200500480","title":"Dichlorination and Bromination of a Threonyl‐<i>S</i>‐Carrier Protein by the Non‐heme Fe<sup>II</sup> Halogenase SyrB2","year":2006,"lang":"en","type":"article","venue":"ChemBioChem","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Boehringer Ingelheim (Canada)","funders":"National Institute of General Medical Sciences","keywords":"Halogenation; Heme; Chemistry; Biosynthesis; Cofactor; Enzyme; Stereochemistry; Combinatorial chemistry; Organic chemistry","score_opus":0.003877042122367404,"score_gpt":0.17900446721058788,"score_spread":0.1751274250882205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155335998","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99588686,0.00007603602,0.00004202118,0.0006625341,0.00002370964,0.00042075693,0.000059325495,0.000020809008,0.002807967],"genre_scores_gemma":[0.9972097,0.000009940422,0.00013935851,0.0001239015,0.000041127136,0.000017890203,0.00008430736,0.000011035071,0.0023627374],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99901026,0.000021390162,0.00023831915,0.00027583903,0.0002647274,0.00018944495],"domain_scores_gemma":[0.99956244,0.00001722143,0.0001426407,0.00020108582,0.000022512479,0.0000541107],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023843432,0.00014327012,0.00012136798,0.000019198827,0.00014477225,0.00002470002,0.00016535418,0.00010134466,0.0002998166],"category_scores_gemma":[0.000041268413,0.00010751221,0.00004212659,0.00021019808,0.0002404571,0.00012860699,0.00013025598,0.000082704064,0.000034142035],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013019189,0.00008583996,0.0024089161,0.000014678512,0.0000045234096,4.604008e-7,0.00025007516,0.000005241219,0.9867507,0.000043197146,0.00928344,0.0011398884],"study_design_scores_gemma":[0.00043821923,0.00004173413,0.008662272,0.000011916762,0.000010222238,0.0000029216237,0.00007152134,0.00037967484,0.9855554,0.00013172394,0.0045615947,0.00013279512],"about_ca_topic_score_codex":0.00025582645,"about_ca_topic_score_gemma":0.00004139823,"teacher_disagreement_score":0.0062533556,"about_ca_system_score_codex":0.00007407866,"about_ca_system_score_gemma":0.000010322452,"threshold_uncertainty_score":0.43842205},"labels":[],"label_agreement":null},{"id":"W2155481565","doi":"10.1128/aem.00031-09","title":"Proteomic and Transcriptomic Analyses Reveal Genes Upregulated by<i>cis</i>-Dichloroethene in<i>Polaromonas</i>sp. Strain JS666","year":2009,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Chemistry; Biochemistry","score_opus":0.007444552920048475,"score_gpt":0.20769268606420377,"score_spread":0.2002481331441553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155481565","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979977,0.00043650257,0.000020485437,0.00033873433,0.000034427165,0.0004695505,0.0003511065,0.000028909668,0.00032258642],"genre_scores_gemma":[0.99721575,0.0006002933,0.00037456656,0.0011748781,0.000017510049,0.00000821882,0.00047513764,0.000014659724,0.00011901773],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984757,0.00006439142,0.00035437668,0.00061162974,0.00006642127,0.00042753882],"domain_scores_gemma":[0.9995975,0.000014861425,0.000093476156,0.00016208868,7.6571826e-7,0.00013129925],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00016394923,0.0003000572,0.00032537544,0.000048201156,0.00010481885,0.000022261507,0.00015444329,0.0002295869,0.0005070452],"category_scores_gemma":[0.0000018383262,0.00026588328,0.00003765594,0.00011838777,0.0004875923,0.00008657598,0.00008215818,0.00017537712,0.000076689525],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007555468,0.00011974181,0.0072061284,0.0000038095461,0.000012556735,0.0000031966974,0.00019120566,0.000009962061,0.98302495,0.0000048192396,0.0005375427,0.008810528],"study_design_scores_gemma":[0.0019670085,0.00021766199,0.16217671,0.000009103798,0.000034361005,0.00007507924,0.00012951122,0.00003039089,0.83073497,0.00024838228,0.00385472,0.0005220896],"about_ca_topic_score_codex":0.00008102009,"about_ca_topic_score_gemma":0.000031475098,"teacher_disagreement_score":0.15497059,"about_ca_system_score_codex":0.00009554889,"about_ca_system_score_gemma":0.000004883563,"threshold_uncertainty_score":0.9999793},"labels":[],"label_agreement":null},{"id":"W2155840322","doi":"10.1139/a02-008","title":"Exploitation of composting management for either reclamation of organic wastes or solid-phase treatment of contaminated environmental matrices","year":2002,"lang":"en","type":"article","venue":"Environmental Reviews","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Bioremediation; Land reclamation; Compost; Environmental science; Waste management; Green waste; Hazardous waste; Pollutant; Environmental chemistry; Biodegradable waste; Contamination; Mechanical biological treatment; Municipal solid waste; Chemistry; Ecology","score_opus":0.038602766479640165,"score_gpt":0.29003508353790175,"score_spread":0.2514323170582616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155840322","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99573517,0.0014979746,0.00031822917,0.000027644106,0.00005752303,0.0017896281,0.00012540404,0.0000085919955,0.00043982317],"genre_scores_gemma":[0.9797164,0.015227667,0.0036188865,0.00002447073,0.0000115232915,0.000043028762,0.000119653705,0.00001924483,0.0012190918],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983646,0.00009349207,0.000855796,0.0002690429,0.00024503216,0.00017200422],"domain_scores_gemma":[0.99885595,0.000070801514,0.0007878632,0.00022869954,8.458849e-7,0.000055829296],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00020912474,0.00020601989,0.00043413416,0.000052314776,0.000049602637,0.0000045760007,0.00014071872,0.00005803102,0.0066245645],"category_scores_gemma":[0.000015529808,0.00015436861,0.00013862457,0.00011890662,0.00016193515,0.0001457689,0.000052165156,0.000024503566,0.00022808173],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000095240175,0.0013541639,0.005203321,0.00008958252,0.000038907943,9.730652e-7,0.00090066873,0.000008244406,0.8642314,0.0000015405975,0.0002612454,0.12781468],"study_design_scores_gemma":[0.005694955,0.0027145767,0.014136682,0.00022161576,0.00031328676,0.000007028139,0.0014508531,0.0015299213,0.9263763,0.0000150426495,0.047102153,0.00043761026],"about_ca_topic_score_codex":0.0000063567286,"about_ca_topic_score_gemma":0.0000081904045,"teacher_disagreement_score":0.12737706,"about_ca_system_score_codex":0.00024087014,"about_ca_system_score_gemma":0.0000013242203,"threshold_uncertainty_score":0.9942835},"labels":[],"label_agreement":null},{"id":"W2155875073","doi":"10.1080/10889860290777477","title":"Phytotoxicity Assay to Assess Plant Species for Phytoremediation of Petroleum-Contaminated Soil","year":2002,"lang":"en","type":"article","venue":"Bioremediation Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Phytoremediation; Lolium perenne; Phytotoxicity; Germination; Bioassay; Agronomy; Biology; Soil contamination; Medicago sativa; Environmental science; Perennial plant; Botany; Contamination; Ecology","score_opus":0.045500703867582655,"score_gpt":0.23279098638753937,"score_spread":0.18729028251995672,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155875073","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98246115,0.00004403295,0.012781439,0.0011160367,0.0013330124,0.00055385154,0.00029992952,0.000046372777,0.0013641432],"genre_scores_gemma":[0.9960905,0.00013545815,0.002256002,0.0003490214,0.0005193881,0.00001143066,0.00006105507,0.00001728924,0.00055985525],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980231,0.00011245124,0.0006086403,0.00025597916,0.0006493922,0.00035042487],"domain_scores_gemma":[0.99882543,0.00012947459,0.00051733624,0.00015842024,0.0001023822,0.00026695983],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009336664,0.00019064102,0.000251845,0.00015270345,0.00016400956,0.000062540836,0.0002727894,0.00012034165,0.0026541168],"category_scores_gemma":[0.0005274983,0.00016528467,0.00013129109,0.00033108387,0.00007798848,0.00030224634,0.00004953547,0.00015203266,0.00025269145],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000069963746,0.00019687755,0.038187746,0.0000153704,0.000021018259,0.0000035061792,0.0005575169,0.00030916499,0.90009385,0.000027245354,0.05482675,0.005690989],"study_design_scores_gemma":[0.00181793,0.00040618645,0.22724314,0.000032282427,0.000042173804,0.000027450129,0.00016040249,0.011511471,0.71964955,0.000052720916,0.03861428,0.00044238725],"about_ca_topic_score_codex":0.000007714924,"about_ca_topic_score_gemma":0.00009644103,"teacher_disagreement_score":0.1890554,"about_ca_system_score_codex":0.00027627582,"about_ca_system_score_gemma":0.000020537564,"threshold_uncertainty_score":0.9982576},"labels":[],"label_agreement":null},{"id":"W2156034694","doi":"10.1007/s00253-003-1297-4","title":"Biodegradation of polycyclic aromatic hydrocarbons in a two-phase partitioning bioreactor in the presence of a bioavailable solvent","year":2003,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":54,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Chemistry; Pyrene; Phenanthrene; Anthracene; Bioavailability; Biodegradation; Naphthalene; Bioreactor; Solvent; Aqueous solution; Aqueous two-phase system; Polycyclic aromatic hydrocarbon; Organic chemistry; Environmental chemistry; Chromatography","score_opus":0.009393989260087665,"score_gpt":0.23033487764307983,"score_spread":0.22094088838299217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156034694","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998683,0.00009988409,0.000055705284,0.000400031,0.000027947337,0.00029560443,0.0000092871,0.000010830081,0.00041774503],"genre_scores_gemma":[0.9991962,0.00009184125,0.00057477196,0.00009568504,0.0000016454607,0.000012037808,0.00001906198,0.0000032677679,0.000005544542],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990828,0.000082899125,0.0003483852,0.00023637612,0.000034966633,0.00021454738],"domain_scores_gemma":[0.9995542,0.0000776933,0.00016966036,0.00018275833,6.2170363e-7,0.000015078892],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000385678,0.00010699922,0.00019831053,0.00013061684,0.00003004263,0.0000030346407,0.00016859942,0.0001971904,0.000039232695],"category_scores_gemma":[0.00004802291,0.000077106895,0.000021091686,0.00048465913,0.0006944247,0.000029121047,0.00004695938,0.00014993879,0.000017436498],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025924677,0.00022694928,0.012454201,0.0000037970783,0.0000043662126,0.000001265237,0.00021223874,9.3411194e-7,0.9853749,0.00073366443,0.000044095552,0.0009176358],"study_design_scores_gemma":[0.0012194167,0.000104802566,0.0026063637,0.00001548633,0.00000784235,0.000022904322,0.0003536598,0.000029509838,0.9935612,0.0010019033,0.00097634195,0.00010054623],"about_ca_topic_score_codex":0.00023386446,"about_ca_topic_score_gemma":0.0009238807,"teacher_disagreement_score":0.0098478375,"about_ca_system_score_codex":0.000023382303,"about_ca_system_score_gemma":0.000012435626,"threshold_uncertainty_score":0.3144328},"labels":[],"label_agreement":null},{"id":"W2156583979","doi":"10.1039/b403874f","title":"Characterisation of weathered hydrocarbon wastes at contaminated sites by GC-simulated distillation and nitrous oxide chemical ionisation GC-MS, with implications for bioremediation","year":2004,"lang":"en","type":"article","venue":"Journal of Environmental Monitoring","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Bioremediation; Environmental chemistry; Chemistry; Contamination; Alkylbenzenes; Asphaltene; Hydrocarbon; Distillation; Soil water; Soil contamination; Vacuum distillation; Nitrous oxide; Gas chromatography; Environmental science; Chromatography; Organic chemistry; Soil science; Benzene","score_opus":0.007926671470337023,"score_gpt":0.20725881829480264,"score_spread":0.19933214682446562,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156583979","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99905896,0.000056816196,0.00028229895,0.00016718854,0.00006595257,0.0002799501,0.000067236244,0.000009006135,0.0000125862425],"genre_scores_gemma":[0.99857664,0.00011476846,0.0010546918,0.000010800009,0.000093180126,0.0000030618432,0.00011555657,0.00001574383,0.000015547423],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989883,0.000022342898,0.00044325305,0.00016966288,0.00023250465,0.00014394597],"domain_scores_gemma":[0.9991252,0.000050918377,0.0006350479,0.00008600569,0.000013254773,0.000089567955],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014134598,0.00014274937,0.00018057133,0.00004556027,0.00009260241,0.00001909927,0.00007562752,0.00008924813,0.00002397581],"category_scores_gemma":[0.000029269155,0.00012076404,0.0000455115,0.000082678474,0.00011431294,0.00029636282,0.000036313257,0.000073830015,0.0000036120948],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011411975,0.000072771996,0.32271227,0.0000050821677,0.000014719031,2.2444951e-7,0.00016369813,0.00030212614,0.67573833,7.440357e-7,0.000008843891,0.0008670646],"study_design_scores_gemma":[0.0010473699,0.00016169544,0.50195014,0.000022630124,0.00003654056,0.000011138717,0.0000636723,0.00009457169,0.49643952,0.000026162712,0.000054904533,0.000091646056],"about_ca_topic_score_codex":0.000032343807,"about_ca_topic_score_gemma":0.0000058259957,"teacher_disagreement_score":0.17929883,"about_ca_system_score_codex":0.00060806423,"about_ca_system_score_gemma":0.000007044244,"threshold_uncertainty_score":0.49246144},"labels":[],"label_agreement":null},{"id":"W2156705208","doi":"10.1099/ijs.0.034926-0","title":"Dehalococcoides mccartyi gen. nov., sp. nov., obligately organohalide-respiring anaerobic bacteria relevant to halogen cycling and bioremediation, belong to a novel bacterial class, Dehalococcoidia classis nov., order Dehalococcoidales ord. nov. and family Dehalococcoidaceae fam. nov., within the phylum Chloroflexi","year":2012,"lang":"en","type":"article","venue":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":556,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Strategic Environmental Research and Development Program; National Science Foundation","keywords":"Biology; Dehalococcoides; Electron acceptor; Reductive dechlorination; Bioremediation; 16S ribosomal RNA; Microbiology; Bacteria; Nuclear chemistry; Biochemistry; Biodegradation; Chemistry; Organic chemistry; Ecology; Vinyl chloride","score_opus":0.017721057974577927,"score_gpt":0.24050261473231055,"score_spread":0.22278155675773262,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156705208","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98964024,0.0014671354,0.0014972087,0.0029810925,0.0025123956,0.0014877216,0.0003216318,0.000044148375,0.000048443126],"genre_scores_gemma":[0.98694277,0.00033500098,0.010030705,0.001566907,0.0008377745,0.00005137773,0.00009110917,0.00006679834,0.0000775318],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9949563,0.00041225582,0.0023951759,0.00076854107,0.0005969125,0.0008708108],"domain_scores_gemma":[0.9963306,0.0005360579,0.0014883564,0.00041643696,0.0005596899,0.00066881045],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0023385559,0.00072226505,0.00110347,0.0005409484,0.00049468107,0.00026638334,0.0009191081,0.0004221763,0.00025686927],"category_scores_gemma":[0.00094439345,0.00053043093,0.00017914055,0.00064936,0.0006592929,0.00088603,0.00084414595,0.000502263,0.00023628797],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033574642,0.00019858005,0.061994746,0.00028360495,0.00031416802,0.00001888443,0.0019614073,0.00013167279,0.9327685,0.00011511193,0.0016418508,0.00023568531],"study_design_scores_gemma":[0.008671255,0.0012673131,0.8685587,0.005734586,0.0009954137,0.010518166,0.0064155986,0.00074469583,0.08088093,0.0002561474,0.012645942,0.0033112443],"about_ca_topic_score_codex":0.0003396279,"about_ca_topic_score_gemma":0.0005569301,"teacher_disagreement_score":0.8518876,"about_ca_system_score_codex":0.0005247232,"about_ca_system_score_gemma":0.00020686554,"threshold_uncertainty_score":0.99971473},"labels":[],"label_agreement":null},{"id":"W2157820412","doi":"10.1111/j.1751-7915.2008.00081.x","title":"Assessing <i>in situ</i> rates of anaerobic hydrocarbon bioremediation","year":2009,"lang":"en","type":"article","venue":"Microbial Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Science Foundation","keywords":"Bioremediation; Aquifer; Environmental chemistry; Biodegradation; Ethylbenzene; Hydrocarbon; Biotransformation; Chemistry; Anaerobic exercise; BTEX; Xylene; Contamination; Environmental science; Toluene; Groundwater; Geology; Ecology; Biology; Organic chemistry; Physiology","score_opus":0.010712928992666694,"score_gpt":0.2449042380315097,"score_spread":0.23419130903884303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157820412","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959263,0.000037574853,0.000093118186,0.002366249,0.00014065728,0.00018438559,0.000004657899,0.00007552971,0.001171534],"genre_scores_gemma":[0.9973928,0.00007085945,0.0019551606,0.0005055194,0.000020088211,7.4108095e-7,0.000021846961,0.000007289143,0.00002573379],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987802,0.000047897145,0.000394177,0.00034243826,0.00011396169,0.00032133466],"domain_scores_gemma":[0.99952364,0.000017208911,0.00018363628,0.00022896932,0.0000075668136,0.000038994516],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023222207,0.00015870683,0.00023497401,0.00017900653,0.000039326867,0.000020137633,0.00027096923,0.00038927118,0.00022431482],"category_scores_gemma":[0.000054122276,0.00015189231,0.000051750812,0.0007516157,0.00023129433,0.0001915587,0.0000784881,0.00019964359,0.0001676854],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013216374,0.00010190801,0.003987485,0.0000025640536,0.0000019919082,0.000004405744,0.00005667256,0.000020029653,0.98336,0.000049456743,0.0005746809,0.011827596],"study_design_scores_gemma":[0.0004358114,0.000097892815,0.037005395,0.000014541382,0.0000048679517,0.0000059445306,0.000037634793,0.000046883582,0.9605864,0.00015931517,0.001445044,0.00016024352],"about_ca_topic_score_codex":0.00011442357,"about_ca_topic_score_gemma":0.00042484788,"teacher_disagreement_score":0.03301791,"about_ca_system_score_codex":0.00013500039,"about_ca_system_score_gemma":0.000016431524,"threshold_uncertainty_score":0.61939883},"labels":[],"label_agreement":null},{"id":"W2157873810","doi":"10.1128/jb.187.23.7996-8005.2005","title":"Growth Substrate- and Phase-Specific Expression of Biphenyl, Benzoate, and C <sub>1</sub> Metabolic Pathways in <i>Burkholderia xenovorans</i> LB400","year":2005,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":98,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Fonds Wetenschappelijk Onderzoek; National Institute of Environmental Health Sciences; Genome British Columbia; Vlaamse regering; U.S. Department of Energy","keywords":"Biochemistry; Biphenyl; Biology; Metabolic pathway; Catabolism; Enzyme; Metabolism; Chemistry; Organic chemistry","score_opus":0.014143478367045319,"score_gpt":0.21204992162924743,"score_spread":0.1979064432622021,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157873810","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99893826,0.0005344851,0.000019736535,0.00018577711,0.00012074273,0.000085070904,0.00002036367,0.0000039073034,0.000091678434],"genre_scores_gemma":[0.9957162,0.0035147106,0.00054987136,0.00013267218,0.00007189181,5.8298406e-7,0.0000037140933,0.00000815997,0.0000021914068],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988099,0.0001134925,0.0005863688,0.00017539761,0.00011832731,0.0001965605],"domain_scores_gemma":[0.9993433,0.00004016763,0.0003929244,0.00008369156,0.000021989688,0.00011794524],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038436434,0.00013851307,0.00036531145,0.000098371864,0.00003411968,0.000016629963,0.00012246746,0.00012802376,0.00024349036],"category_scores_gemma":[0.000018602354,0.00010624509,0.00004346901,0.0001384063,0.00022193145,0.00029942798,0.000061540086,0.00017179406,0.000008966697],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018278888,0.00012338543,0.018086633,0.000006211396,0.000005221838,0.000008912076,0.0003123253,0.000003837043,0.9742703,0.000014759701,0.0002052597,0.006780368],"study_design_scores_gemma":[0.001518191,0.00019475109,0.21250328,0.000022333657,0.000007810747,0.000081524966,0.000041819476,0.000009708008,0.7830428,0.00005812566,0.002422911,0.000096733595],"about_ca_topic_score_codex":0.000009116802,"about_ca_topic_score_gemma":0.000041030835,"teacher_disagreement_score":0.19441666,"about_ca_system_score_codex":0.000027760807,"about_ca_system_score_gemma":0.000015309986,"threshold_uncertainty_score":0.4332549},"labels":[],"label_agreement":null},{"id":"W2158107035","doi":"10.1371/journal.pone.0052550","title":"Structural Characterization of Pandoraea pnomenusa B-356 Biphenyl Dioxygenase Reveals Features of Potent Polychlorinated Biphenyl-Degrading Enzymes","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Concordia University","funders":"Argonne National Laboratory; National Center for Research Resources; National Institute of General Medical Sciences; Biological and Environmental Research; Natural Sciences and Engineering Research Council of Canada; U.S. Department of Energy; Office of Experimental Program to Stimulate Competitive Research; National Science Foundation; National Institutes of Health; University of Chicago","keywords":"Biphenyl; Dioxygenase; Active site; Stereochemistry; Chemistry; Enzyme; Polychlorinated biphenyl; Steric effects; Substrate (aquarium); Biochemistry; Biology; Organic chemistry","score_opus":0.020294172627946718,"score_gpt":0.1892423613935738,"score_spread":0.1689481887656271,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158107035","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987589,0.00004456538,0.000006383861,0.00021633465,0.00006606544,0.00044979496,0.00011176659,0.000031925414,0.0003142573],"genre_scores_gemma":[0.9982772,0.000081002254,0.00053306663,0.00009078316,0.00003989308,0.0000078814155,0.00010166112,0.000013684979,0.00085481914],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99872154,0.000054003878,0.00035664235,0.00023778474,0.000396034,0.00023400552],"domain_scores_gemma":[0.9992822,0.000022431988,0.0003326997,0.00021484087,0.00004176815,0.00010608441],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001064358,0.00016044313,0.00029249213,0.00006638931,0.000055776898,0.000022139304,0.00019887966,0.000084736974,0.0017968161],"category_scores_gemma":[0.00005399618,0.00012979998,0.0000566862,0.00030419795,0.000120558485,0.00026548488,0.00009040855,0.00008586615,0.00008569971],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029388446,0.00018419654,0.051541608,0.000047354388,0.00004577921,5.234249e-7,0.00021106446,0.000001364842,0.94577396,0.00001917066,0.000102943224,0.0020426656],"study_design_scores_gemma":[0.0002495226,0.000054107353,0.40267506,0.0000452543,0.000018237162,5.864295e-7,0.000021162397,0.000058542933,0.596745,0.00001873676,0.000014296318,0.00009945677],"about_ca_topic_score_codex":0.00025896728,"about_ca_topic_score_gemma":0.000013088215,"teacher_disagreement_score":0.35113347,"about_ca_system_score_codex":0.00006775235,"about_ca_system_score_gemma":0.000008102363,"threshold_uncertainty_score":0.9991157},"labels":[],"label_agreement":null},{"id":"W2158265621","doi":"10.1128/aem.72.1.428-436.2006","title":"Growth of <i>Dehalobacter</i> and <i>Dehalococcoides</i> spp. during Degradation of Chlorinated Ethanes","year":2006,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":157,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Dehalococcoides; Reductive dechlorination; Vinyl chloride; Enrichment culture; Bacteria; Microbiology; Chemistry; 16S ribosomal RNA; Biology; Biodegradation; Organic chemistry","score_opus":0.0026293326779586045,"score_gpt":0.14937209467513474,"score_spread":0.14674276199717612,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158265621","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99882346,0.000080532685,0.000006980116,0.000032323518,0.000031776188,0.00017577937,0.00011114287,0.00001095946,0.0007270678],"genre_scores_gemma":[0.99922717,0.00020487071,0.00021524334,0.000048053294,0.000011565181,0.000003107588,0.00017021898,0.000009092116,0.00011070872],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991837,0.000020866313,0.0002923778,0.0002747439,0.000048311653,0.00017999043],"domain_scores_gemma":[0.99967927,0.000022573151,0.00016344196,0.00009441651,0.0000015922582,0.000038737966],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000080722464,0.00014860439,0.00020850131,0.000029363822,0.000049002527,0.000004219948,0.00007692057,0.000113364134,0.00027855037],"category_scores_gemma":[0.0000020231594,0.00013327839,0.000025948018,0.00006818932,0.0005396696,0.000053251755,0.00014211508,0.00006290062,0.000025162431],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035289297,0.00007241452,0.113402836,0.00001944302,0.0000062328045,6.4031997e-7,0.000036602014,0.0000030172178,0.8860232,0.00005737018,0.000065610795,0.00027729257],"study_design_scores_gemma":[0.0005560472,0.000034491008,0.24688005,0.0000042148995,0.000012395708,0.000022812681,0.000047685786,0.0000020795353,0.751923,0.00005613785,0.00034582787,0.00011525676],"about_ca_topic_score_codex":0.00021157667,"about_ca_topic_score_gemma":0.000029116114,"teacher_disagreement_score":0.13410024,"about_ca_system_score_codex":0.000030883406,"about_ca_system_score_gemma":0.0000018174625,"threshold_uncertainty_score":0.5434935},"labels":[],"label_agreement":null},{"id":"W2158345445","doi":"10.1186/1471-2164-12-287","title":"Site-Specific Mobilization of Vinyl Chloride Respiration Islands by a Mechanism Common in Dehalococcoides","year":2011,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of General Medical Sciences; Strategic Environmental Research and Development Program; Joint Genome Institute; Office of Science; National Institutes of Health; U.S. Environmental Protection Agency; U.S. Department of Energy","keywords":"Dehalococcoides; Biology; Genomic island; Synteny; Mobile genetic elements; Genome; Genetics; Horizontal gene transfer; Gene; Computational biology; Vinyl chloride","score_opus":0.027062230552941578,"score_gpt":0.2090450660578226,"score_spread":0.18198283550488104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158345445","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965931,0.00001907,0.0013300797,0.0000071172763,0.00007699052,0.00023054318,0.000031666514,0.000013320843,0.001698103],"genre_scores_gemma":[0.9981752,0.00007822119,0.0015056555,0.00006793327,0.000012591835,0.000004103782,0.000047406065,0.000009427939,0.0000994862],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992396,0.000038241946,0.00029378707,0.0001897164,0.00010686113,0.00013179409],"domain_scores_gemma":[0.9996411,0.000015077261,0.000131451,0.00016675217,0.000007414677,0.000038160128],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023553411,0.00009004326,0.000112656664,0.000038890284,0.00003007229,0.000009466528,0.00012851573,0.00007963628,0.0008349474],"category_scores_gemma":[0.0000119848455,0.0000877915,0.000028191058,0.00015074834,0.00004647142,0.000082953804,0.000060926595,0.000048049562,0.00017645552],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006655387,0.00007359755,0.10195338,0.0000045398237,8.638138e-7,3.807456e-7,0.0012484498,0.000059826372,0.8957175,0.000088974426,0.000388245,0.0003977178],"study_design_scores_gemma":[0.00041374407,0.00007752384,0.045695726,0.000005758653,0.0000036608155,7.874825e-7,0.00013469293,0.0007125178,0.9499743,0.00054381316,0.0022945593,0.00014292577],"about_ca_topic_score_codex":0.00036219083,"about_ca_topic_score_gemma":0.003577605,"teacher_disagreement_score":0.05625765,"about_ca_system_score_codex":0.00013267218,"about_ca_system_score_gemma":0.00001013365,"threshold_uncertainty_score":0.9142088},"labels":[],"label_agreement":null},{"id":"W2158439517","doi":"10.1111/j.1574-6941.2002.tb00956.x","title":"Microbial community composition at an ethane pyrolysis plant site at different hydrocarbon inputs","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nova Chemicals (Canada); University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Naphthalene; Hydrocarbon; Toluene; Biodegradation; Composition (language); Environmental chemistry; Benzene; Biology; Incubation; Xylene; Microbial population biology; Aromatic hydrocarbon; Alcaligenes; Pyrolysis; Styrene; Pseudomonas; Chemistry; Organic chemistry; Bacteria; Ecology; Biochemistry","score_opus":0.015055673599816114,"score_gpt":0.20041508514302267,"score_spread":0.18535941154320656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158439517","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967766,0.000029251276,0.0000038415515,0.0007725456,0.0006487769,0.00034723218,0.0005167106,0.000108622095,0.00079646293],"genre_scores_gemma":[0.9927161,0.00006644237,0.000073261326,0.0032465183,0.00006932655,0.000010168519,0.0026025246,0.000024460489,0.0011912492],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972253,0.00097348844,0.0004750444,0.0005568691,0.00007049248,0.0006988254],"domain_scores_gemma":[0.99886054,0.00014114047,0.0002681911,0.00051199197,0.000012550823,0.00020560296],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00026448342,0.00036582517,0.0004843956,0.00009250138,0.000562635,0.000016997657,0.00046513448,0.0005882232,0.016380781],"category_scores_gemma":[0.000017288103,0.0003254499,0.00012454788,0.00015682528,0.0006574649,0.000094912946,0.0008506284,0.00047663815,0.0060441433],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012313537,0.00048816652,0.10777428,0.0000042999995,0.000030999883,0.00001433819,0.00082202564,0.000023206829,0.87573886,0.0000011518244,0.014859033,0.000120490535],"study_design_scores_gemma":[0.0022840004,0.000898069,0.19739981,0.000009412377,0.00007585656,0.00060460967,0.00002525278,0.00034849253,0.77713525,0.000014135187,0.020458698,0.0007464279],"about_ca_topic_score_codex":0.0002842251,"about_ca_topic_score_gemma":0.020360308,"teacher_disagreement_score":0.098603636,"about_ca_system_score_codex":0.0008974613,"about_ca_system_score_gemma":0.0000035622954,"threshold_uncertainty_score":0.9999198},"labels":[],"label_agreement":null},{"id":"W2159562027","doi":"10.1128/jb.01267-06","title":"Family Shuffling of Soil DNA To Change the Regiospecificity of <i>Burkholderia xenovorans</i> LB400 Biphenyl Dioxygenase","year":2006,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Biphenyl; Dioxygenase; Biology; Chemistry; Burkholderia; Biochemistry; Stereochemistry; Enzyme; Bacteria; Genetics; Organic chemistry","score_opus":0.022992491846451264,"score_gpt":0.2197485863287453,"score_spread":0.19675609448229403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159562027","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976358,0.0001000358,0.00010839718,0.0010828836,0.00037468414,0.00012997526,0.000029008983,0.0000037457482,0.00053551025],"genre_scores_gemma":[0.99855375,0.00011405325,0.00037994303,0.00067244336,0.00021782624,8.494592e-7,0.000002658608,0.000008109272,0.00005038829],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986927,0.00011241802,0.00067029253,0.00013089905,0.00019619518,0.00019747966],"domain_scores_gemma":[0.9989904,0.000055435725,0.0006498156,0.00018451382,0.00004843947,0.00007135533],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005158403,0.00011953781,0.0003369801,0.000057315476,0.000043668933,0.0000082871675,0.00034559914,0.0000949193,0.00043895544],"category_scores_gemma":[0.000034212175,0.00007664148,0.00012781007,0.00022267054,0.00022463208,0.000107035405,0.00008865996,0.00013262602,0.000026829333],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010782833,0.00007856604,0.014508027,0.000006704258,0.000011198064,0.000005537507,0.0002284617,0.00007112772,0.98126066,0.0000135951095,0.0026009295,0.0011073723],"study_design_scores_gemma":[0.00053458026,0.00038189717,0.6255192,0.000035662728,0.000020953552,0.00004400644,0.000114303795,0.000017913093,0.3487325,0.000089776724,0.02437614,0.00013306581],"about_ca_topic_score_codex":0.00045098324,"about_ca_topic_score_gemma":0.00026055938,"teacher_disagreement_score":0.6325281,"about_ca_system_score_codex":0.000055773882,"about_ca_system_score_gemma":0.00001999395,"threshold_uncertainty_score":0.48062542},"labels":[],"label_agreement":null},{"id":"W2159741264","doi":"10.1139/s06-061","title":"Organic solvents improve hydrocarbon desorption and biodegradation in highly contaminated weathered soils","year":2007,"lang":"en","type":"article","venue":"Journal of Environmental Engineering and Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Consejo Nacional de Ciencia y Tecnología","keywords":"Biodegradation; Microcosm; Toluene; Hydrocarbon; Chemistry; Desorption; Acetone; Environmental chemistry; Benzene; Solubility; Solvent; Organic chemistry; Adsorption","score_opus":0.003279805153558228,"score_gpt":0.17342649943456467,"score_spread":0.17014669428100646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159741264","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99925536,0.000075275166,0.00041160322,0.000031555304,0.00012082001,0.000058855483,0.0000018772002,0.0000045070337,0.00004016928],"genre_scores_gemma":[0.9992018,0.00013724118,0.0005895385,0.000024867144,0.000013867097,1.4517245e-7,5.6194875e-7,0.0000045167185,0.000027496768],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99916196,0.0000071252202,0.00025018677,0.0001443518,0.00025246458,0.00018390946],"domain_scores_gemma":[0.99969476,0.000018274739,0.000114100716,0.000050924376,0.0000022420672,0.000119721524],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007871202,0.000086885404,0.00009727346,0.00010569189,0.00004480614,0.000025852423,0.00009322487,0.000041454427,0.00004650619],"category_scores_gemma":[0.000029853736,0.00007370754,0.00001462852,0.00017671578,0.00016967172,0.00033011867,0.000056615874,0.00010387515,0.000005757199],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012077728,0.000030837356,0.02370439,0.000001987168,0.0000014219418,0.0000055941478,0.00015527438,0.00009224226,0.97111046,0.000002859436,0.0000016390939,0.004881234],"study_design_scores_gemma":[0.00064085564,0.00015885437,0.7137372,0.00002349218,0.0000064277647,0.00005764649,0.00011499916,0.006705861,0.27830523,0.0000116277715,0.00010759021,0.0001302234],"about_ca_topic_score_codex":0.000014017889,"about_ca_topic_score_gemma":0.000011809597,"teacher_disagreement_score":0.6928052,"about_ca_system_score_codex":0.00021251819,"about_ca_system_score_gemma":0.0000062755917,"threshold_uncertainty_score":0.30057064},"labels":[],"label_agreement":null},{"id":"W2160003948","doi":"10.1128/aem.66.12.5387-5392.2000","title":"Uptake and Active Efflux of Polycyclic Aromatic Hydrocarbons by <i>Pseudomonas fluorescens</i> LP6a","year":2000,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":111,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Phenanthrene; Efflux; Chemistry; Pseudomonas fluorescens; Fluoranthene; Naphthalene; Biochemistry; Chromatography; Bacteria; Environmental chemistry; Organic chemistry; Biology","score_opus":0.0026270077597695548,"score_gpt":0.1606900668144376,"score_spread":0.15806305905466803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160003948","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99575895,0.00011884841,0.0000024584933,0.000094890274,0.000026863689,0.00023457785,0.00013527868,0.000016391994,0.003611714],"genre_scores_gemma":[0.99806696,0.00059582794,0.0001979529,0.0005548667,0.0000117963955,0.000006058155,0.00018103686,0.000014409273,0.00037110408],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99897015,0.000031181753,0.0002615226,0.0003948415,0.00005769325,0.00028460225],"domain_scores_gemma":[0.99962187,0.000033746725,0.00008401362,0.00014892155,8.5714376e-8,0.000111342066],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000065315064,0.00021119611,0.00024639204,0.000019521038,0.00008794152,0.0000074399168,0.00011210656,0.00015163833,0.0011853375],"category_scores_gemma":[0.0000016014645,0.00018537638,0.000033524677,0.000056168898,0.00079205824,0.000046780788,0.000099738034,0.00010634934,0.00028715754],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040621388,0.00010023876,0.0039456272,0.0000023907824,0.00001743158,6.885032e-7,0.00020483881,4.9413813e-7,0.9732179,0.0000022618553,0.001239524,0.02122795],"study_design_scores_gemma":[0.0018435733,0.00020172025,0.07153424,0.000010357817,0.000055837176,0.000105036444,0.00027598903,0.000022165663,0.87875986,0.00020501482,0.046463426,0.00052276236],"about_ca_topic_score_codex":0.00006069408,"about_ca_topic_score_gemma":0.000010890204,"teacher_disagreement_score":0.09445805,"about_ca_system_score_codex":0.000045256686,"about_ca_system_score_gemma":0.0000024462192,"threshold_uncertainty_score":0.9997277},"labels":[],"label_agreement":null},{"id":"W2160619929","doi":"10.1897/03-484","title":"Degradation of petroleum hydrocarbons in two sub-antarctic soils: Influence of an oleophilic fertilizer","year":2004,"lang":"en","type":"article","venue":"Environmental Toxicology and Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Rimouski","funders":"","keywords":"Soil water; Petroleum; Environmental science; Fertilizer; Environmental chemistry; Degradation (telecommunications); Chemistry; Soil science; Engineering; Organic chemistry","score_opus":0.004619078267516316,"score_gpt":0.20983131909473918,"score_spread":0.20521224082722286,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160619929","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995039,0.000038917853,0.0000018898376,0.000051724608,0.000012561728,0.000071650335,0.000012619855,0.0000056889385,0.00030104074],"genre_scores_gemma":[0.9996801,0.000077639226,0.00009118239,0.000079129946,0.000005790396,0.0000034259974,0.000022769722,0.0000055552987,0.000034418124],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99920243,0.00002390073,0.00025444367,0.00023821772,0.00012329262,0.00015768986],"domain_scores_gemma":[0.9996578,0.000015202954,0.00011375684,0.00014149181,4.5998416e-7,0.00007130115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000098985445,0.000111921596,0.0001489041,0.000016012367,0.000028561593,0.0000024050669,0.0001146348,0.00009362217,0.00031526596],"category_scores_gemma":[0.000011489605,0.00011186801,0.000025871275,0.000061812156,0.00047251326,0.00012017372,0.00007686091,0.00010966378,0.000014272276],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003654665,0.00025763552,0.14286618,0.000008221608,0.000003790428,0.0000033054137,0.00009720546,0.00085030694,0.85558105,0.0000012157018,8.7791375e-7,0.00029368562],"study_design_scores_gemma":[0.0006420861,0.00004798037,0.34935918,0.000007492086,0.0000063629086,0.000010876792,0.00006477969,0.00004747204,0.649607,0.00012499248,0.000007341589,0.00007442759],"about_ca_topic_score_codex":0.00009519973,"about_ca_topic_score_gemma":0.00015081708,"teacher_disagreement_score":0.206493,"about_ca_system_score_codex":0.00013556654,"about_ca_system_score_gemma":0.000010364185,"threshold_uncertainty_score":0.4561845},"labels":[],"label_agreement":null},{"id":"W2160793801","doi":"10.1139/s06-057","title":"Comparative study of PAH removal efficiency under absence of molecular oxygen: effect of electron acceptor and hydrodynamic conditions","year":2007,"lang":"en","type":"article","venue":"Journal of Environmental Engineering and Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Environmental Health Sciences; National Institutes of Health","keywords":"Sulfate; Denitrification; Chemistry; Denitrifying bacteria; Pyrene; Electron acceptor; Phenanthrene; Environmental chemistry; Naphthalene; Shear (geology); Sulfate-reducing bacteria; Biodegradation; Photochemistry; Organic chemistry; Nitrogen; Materials science; Composite material","score_opus":0.0035436718519557655,"score_gpt":0.22359673565934243,"score_spread":0.22005306380738668,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160793801","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993517,0.00008974139,0.00031097178,0.0000044668977,0.000049502953,0.00012652659,0.0000066781354,0.0000018618276,0.000058568432],"genre_scores_gemma":[0.9996673,0.00002893019,0.0002865361,0.0000039899724,0.000004093887,1.8610143e-7,3.6059652e-7,0.0000032303785,0.000005360025],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99891734,0.000022335515,0.00035850707,0.00013837643,0.0004107182,0.00015272123],"domain_scores_gemma":[0.99948627,0.000066401175,0.00026539032,0.00008333812,0.00000591318,0.000092668684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007643767,0.000100424586,0.00023226108,0.0001040521,0.000042809254,0.000006116189,0.00016017987,0.000026397385,0.00003901883],"category_scores_gemma":[0.000023745226,0.00007907011,0.000032516044,0.00022948308,0.0004944984,0.0001526793,0.000075786134,0.00009334307,8.1135846e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002787829,0.00016017711,0.0069294255,0.000008249519,0.000008832123,0.000003946096,0.00044145773,0.010129046,0.9821799,0.0000048765205,0.0000013976342,0.00010485365],"study_design_scores_gemma":[0.000654063,0.0012941692,0.39298898,0.000018857338,0.000018730314,0.00005203737,0.0003763464,0.0024644765,0.60204154,0.00000331741,0.000004526035,0.00008294994],"about_ca_topic_score_codex":0.000009364368,"about_ca_topic_score_gemma":0.0000023912444,"teacher_disagreement_score":0.38605955,"about_ca_system_score_codex":0.00007097277,"about_ca_system_score_gemma":0.000008386332,"threshold_uncertainty_score":0.32243857},"labels":[],"label_agreement":null},{"id":"W2160933846","doi":"10.1139/s08-027","title":"Décontamination de sols pollués par les hydrocarbures aromatiques polycycliques par biodégradation en présence de substrats organiques supplémentaires","year":2008,"lang":"fr","type":"article","venue":"Journal of Environmental Engineering and Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Forestry; Gradation; Chemistry; Geography; Art","score_opus":0.0053637740960255165,"score_gpt":0.20102384926512318,"score_spread":0.19566007516909767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160933846","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954496,0.0013201566,0.0014675814,0.0011603474,0.00036962112,0.00012861549,0.000034981313,0.000021352209,0.00004772799],"genre_scores_gemma":[0.98275244,0.008056901,0.008764768,0.0001279214,0.00014527487,0.0000013203745,0.0000029902337,0.000015805075,0.0001325528],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99808514,0.0001011162,0.00050199137,0.00027821577,0.0005469619,0.00048659844],"domain_scores_gemma":[0.9991348,0.00008214685,0.0003074587,0.00012303349,0.000009686849,0.00034291012],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00094022753,0.00025057222,0.00023562174,0.00015706276,0.00035821958,0.000099097284,0.0003474634,0.00014968636,0.00025554938],"category_scores_gemma":[0.00011880007,0.00023664623,0.0000726091,0.00021102332,0.0011598683,0.0011056787,0.00009958752,0.00028007716,0.000013581125],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013993463,0.00011875306,0.080864094,0.00001874927,0.000012463622,0.00004875872,0.00287593,0.000641641,0.91168785,0.000018524872,0.00042102448,0.0032782087],"study_design_scores_gemma":[0.00017813026,0.00021444727,0.487462,0.000084071886,0.000019459627,0.00063126045,0.0002243954,0.002566071,0.50769883,0.000039501327,0.0006948789,0.00018690796],"about_ca_topic_score_codex":0.0002931831,"about_ca_topic_score_gemma":0.000021091497,"teacher_disagreement_score":0.4065979,"about_ca_system_score_codex":0.00082344626,"about_ca_system_score_gemma":0.000103357976,"threshold_uncertainty_score":0.96501535},"labels":[],"label_agreement":null},{"id":"W2161127204","doi":"10.1080/09593332708618727","title":"A New Rapid Technique for Screening the Potential of Implanted Microorganisms to Tolerate and Grow on Petroleum Oily Sludges","year":2006,"lang":"en","type":"article","venue":"Environmental Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Bacillus cereus; Microorganism; Petroleum; Biodegradation; Chemistry; Pulp and paper industry; Extraction (chemistry); Microbiology; Food science; Environmental science; Waste management; Bacteria; Biology; Chromatography; Organic chemistry","score_opus":0.0034253207276896936,"score_gpt":0.18044153722119338,"score_spread":0.1770162164935037,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161127204","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97902995,0.00004996316,0.016881648,0.0028965166,0.0000585865,0.00072890957,0.000107180305,0.000056232664,0.00019102203],"genre_scores_gemma":[0.987307,0.000023587927,0.011892357,0.0003018118,0.000028662791,0.000025979552,0.000021932905,0.000016935306,0.0003817496],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999048,0.000020194831,0.00022517367,0.00031562906,0.00013241124,0.00025860008],"domain_scores_gemma":[0.99961686,0.000020349884,0.000101564576,0.00020958442,0.0000011653639,0.000050500566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012206399,0.00016139315,0.00015707217,0.0000796459,0.00012049181,0.000011968409,0.00024650374,0.00015580868,0.00047494448],"category_scores_gemma":[0.000007514533,0.00012305648,0.000043005497,0.00012975992,0.00023790957,0.00004123533,0.00021287207,0.00011458824,0.000069954986],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000061430874,0.000043496955,0.003368018,0.0000019237727,0.000006138058,0.0000020493767,0.000014982273,0.00003945726,0.98423797,0.000063488435,0.0024679396,0.009693135],"study_design_scores_gemma":[0.0004898906,0.0003664532,0.025146719,0.000008285665,0.000011619824,0.00004395402,0.000087006076,0.000025395593,0.96480703,0.0003528653,0.008509889,0.00015091286],"about_ca_topic_score_codex":0.00007644795,"about_ca_topic_score_gemma":0.000031880572,"teacher_disagreement_score":0.0217787,"about_ca_system_score_codex":0.000058583104,"about_ca_system_score_gemma":0.0000036341391,"threshold_uncertainty_score":0.5200309},"labels":[],"label_agreement":null},{"id":"W2161377296","doi":"10.1128/jb.01476-06","title":"Characterization of Biphenyl Dioxygenase of <i>Pandoraea pnomenusa</i> B-356 As a Potent Polychlorinated Biphenyl-Degrading Enzyme","year":2007,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; University of British Columbia","funders":"Basic Energy Sciences; Natural Sciences and Engineering Research Council of Canada; Office of Science","keywords":"Biphenyl; Dioxygenase; Polychlorinated biphenyl; Enzyme; Biology; Chemistry; Biochemistry; Ecology","score_opus":0.008969530192365436,"score_gpt":0.22164907795156236,"score_spread":0.21267954775919692,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161377296","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981199,0.000032085216,0.0006869262,0.00018075909,0.0005392529,0.000118676886,0.000029454268,0.0000068935706,0.0002860733],"genre_scores_gemma":[0.99903697,0.00015153502,0.0003591793,0.00019954283,0.00009897913,3.4288587e-7,0.00001707627,0.000011464451,0.00012491125],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983425,0.000088153385,0.00090829324,0.00015402035,0.00024126313,0.000265732],"domain_scores_gemma":[0.9982511,0.000055411543,0.001332291,0.00014316873,0.0000674857,0.00015057888],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00078656577,0.00015291719,0.00042704758,0.00017034255,0.0000369864,0.00000806922,0.00024703442,0.00014162788,0.0008524386],"category_scores_gemma":[0.00008723048,0.000121159996,0.00013839196,0.0003254222,0.0001908823,0.00020945376,0.00007769551,0.00015952128,0.00003231872],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046406154,0.00013904157,0.023221038,0.0000119132155,0.000035510224,0.000020010499,0.00025414542,0.000006942579,0.9719826,0.00001401861,0.000056190685,0.0037945053],"study_design_scores_gemma":[0.00086032733,0.0005495325,0.25783926,0.00003335321,0.0000216153,0.00012857257,0.000056703153,0.0000113375445,0.73542386,0.000015553984,0.004944893,0.0001150026],"about_ca_topic_score_codex":0.00006520256,"about_ca_topic_score_gemma":0.000017518696,"teacher_disagreement_score":0.23655878,"about_ca_system_score_codex":0.000118729746,"about_ca_system_score_gemma":0.00003847111,"threshold_uncertainty_score":0.9333605},"labels":[],"label_agreement":null},{"id":"W2161724993","doi":"10.1186/2193-2697-3-6","title":"Effects of soil properties and biosurfactant on the behavior of PAHs in soil-water systems","year":2014,"lang":"en","type":"article","venue":"ENVIRONMENTAL SYSTEMS RESEARCH","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Government of Saskatchewan; Ministry of Agriculture; University of New Brunswick","funders":"","keywords":"Phenanthrene; Environmental chemistry; Sorption; Environmental remediation; Desorption; Chemistry; Soil contamination; Ditch; Pyrene; Bioremediation; Environmental science; Soil water; Environmental engineering; Contamination; Soil science; Adsorption; Ecology","score_opus":0.02918811736247511,"score_gpt":0.23357616488448207,"score_spread":0.20438804752200695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161724993","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977225,0.00017709988,0.0000017411547,0.00006344613,0.00011714442,0.0013709873,0.000018200923,0.0000060665598,0.0005227856],"genre_scores_gemma":[0.9992598,0.00009992991,0.0000021505853,0.000010842475,0.000020304868,0.00010302108,0.0000040731716,0.000015512733,0.00048436385],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997136,0.0009218763,0.0004072434,0.0003088502,0.0008437496,0.0003822737],"domain_scores_gemma":[0.99930775,0.0002248728,0.0000897105,0.00028811127,0.0000043221316,0.00008526014],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021555934,0.00015140024,0.00025674468,0.00007832338,0.000101521975,0.00003182183,0.00027056315,0.000102487276,0.00015301016],"category_scores_gemma":[0.00005715782,0.000081268685,0.000036243127,0.00011792476,0.0006864921,0.00007658239,0.00029272848,0.00020998847,0.0002549393],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036512658,0.0002073933,0.07310992,0.00012620672,0.000006335207,0.000003201383,0.0004599825,0.00018568327,0.9253475,0.000018943378,0.000119537755,0.00037879965],"study_design_scores_gemma":[0.0005136987,0.0003599448,0.12733945,0.00018083549,0.000006767935,0.0000058614605,0.0007330422,0.0012071817,0.8685304,0.00000361148,0.0009674667,0.00015174807],"about_ca_topic_score_codex":0.0020694297,"about_ca_topic_score_gemma":0.000054154378,"teacher_disagreement_score":0.056817096,"about_ca_system_score_codex":0.00016994089,"about_ca_system_score_gemma":0.0000049632395,"threshold_uncertainty_score":0.3314041},"labels":[],"label_agreement":null},{"id":"W2162059849","doi":"10.1139/w09-044","title":"Enhancement of surfactin production of <i>Bacillus subtilis</i> fmbR by replacement of the native promoter with the Pspac promoter","year":2009,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Surfactin; Bacillus subtilis; Recombinant DNA; Operon; Strain (injury); Wild type; Microbiology; Bacillales; Bacillaceae; Chemistry; Promoter; Plasmid; Biology; Escherichia coli; Lipopeptide; Molecular biology; Gene; Biochemistry; Mutant; Bacteria; Genetics; Gene expression","score_opus":0.0056008437267385585,"score_gpt":0.18427603721582875,"score_spread":0.1786751934890902,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162059849","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99323416,0.00009011047,0.00001688685,0.0057898443,0.00021983495,0.00035283025,0.000060462902,8.3094955e-7,0.00023502008],"genre_scores_gemma":[0.99902713,0.000015485813,0.000119556986,0.00031330428,0.000016155887,5.5578175e-7,0.000004722726,0.000004384865,0.0004986849],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989511,0.00015817935,0.00043034222,0.00014612629,0.000109130306,0.00020515252],"domain_scores_gemma":[0.9988076,0.000016835387,0.0007884501,0.00020451167,0.000101844584,0.00008076689],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005475952,0.00011555856,0.00022228995,0.0000408623,0.000060045724,0.000004373662,0.00030781986,0.00006681772,0.0005629991],"category_scores_gemma":[0.0000484892,0.000058988197,0.00006762094,0.00019381852,0.0005221093,0.000060258957,0.000020162386,0.00015336782,0.0000034631494],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009233052,0.000053249823,0.004983773,0.0000065909026,0.000029661038,7.8785973e-7,0.0011263038,0.000014396681,0.9759056,0.000001988249,0.017104851,0.0006804688],"study_design_scores_gemma":[0.0003404254,0.0007296211,0.0059053632,0.00004346697,0.000023308685,0.00005639401,0.00017213586,7.1490683e-7,0.9746773,0.0000086761775,0.017972521,0.00007002203],"about_ca_topic_score_codex":0.00075631216,"about_ca_topic_score_gemma":0.007529664,"teacher_disagreement_score":0.0067733517,"about_ca_system_score_codex":0.00016088235,"about_ca_system_score_gemma":0.00020334886,"threshold_uncertainty_score":0.6164445},"labels":[],"label_agreement":null},{"id":"W2162446418","doi":"10.1016/j.jcis.2007.11.045","title":"Effects of additives on the structure of rhamnolipid (biosurfactant): A small-angle neutron scattering (SANS) study","year":2007,"lang":"en","type":"article","venue":"Journal of Colloid and Interface Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":77,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Steacie Institute for Molecular Sciences; National Research Council Canada; Concordia University","funders":"Natural Sciences and Engineering Research Council of Canada; Concordia University; National Science Foundation","keywords":"Rhamnolipid; Micelle; Small-angle neutron scattering; Chemistry; Neutron scattering; Chemical engineering; Scattering; Organic chemistry; Aqueous solution; Geology","score_opus":0.006345901697692151,"score_gpt":0.22838704535849097,"score_spread":0.22204114366079883,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162446418","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99898183,0.000043702334,0.000035386736,0.0001361318,0.0002823538,0.00023785088,0.000008426662,0.0000025686422,0.00027176284],"genre_scores_gemma":[0.9996545,0.000026138596,0.00016211497,0.00009276826,0.000025249401,1.1100028e-7,5.2438413e-8,0.0000041504472,0.000034971945],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99866116,0.000054286687,0.0004203728,0.00016423037,0.00049165176,0.0002083014],"domain_scores_gemma":[0.9990167,0.00019255011,0.00050602615,0.00012497275,0.00006213522,0.0000976196],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009792417,0.000118881835,0.00021410748,0.00009938828,0.000108598695,0.000032915428,0.00046740225,0.000033412533,0.00020893237],"category_scores_gemma":[0.00018080688,0.00006887267,0.000050543953,0.00046687748,0.000697925,0.00021753836,0.00014449366,0.00016276714,0.0000028431448],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011386832,0.00013281105,0.009705103,0.000010952537,0.000009724162,8.927103e-7,0.0014711794,0.000041441184,0.9878705,0.00000750323,0.00009453696,0.00054148876],"study_design_scores_gemma":[0.00031959533,0.00092095154,0.19108759,0.0000708042,0.00001123382,0.000009670852,0.0010271175,0.0000149569305,0.8063612,0.0000096398435,0.000106842424,0.00006040632],"about_ca_topic_score_codex":0.000020494781,"about_ca_topic_score_gemma":0.000056759276,"teacher_disagreement_score":0.1815093,"about_ca_system_score_codex":0.000066847395,"about_ca_system_score_gemma":0.00003448054,"threshold_uncertainty_score":0.28085458},"labels":[],"label_agreement":null},{"id":"W2163292114","doi":"10.1128/aem.02037-08","title":"Characterization of a <i>Dehalobacter</i> Coculture That Dechlorinates 1,2-Dichloroethane to Ethene and Identification of the Putative Reductive Dehalogenase Gene","year":2009,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Dehalogenase; Dehalococcoides; Reductive dechlorination; Chemistry; Biology; Biochemistry; Gene; Organic chemistry; Biodegradation","score_opus":0.004532803342170158,"score_gpt":0.17800423892343942,"score_spread":0.17347143558126926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2163292114","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998792,0.000026924348,0.000042551477,0.00032662,0.000045290097,0.00037953092,0.0003304351,0.0000071889326,0.000049438917],"genre_scores_gemma":[0.999112,0.00012614687,0.00014262692,0.0003761296,0.000009193892,0.0000050433064,0.00018751211,0.0000051897828,0.000036136116],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992639,0.00003847498,0.00022804363,0.00027735403,0.00005529524,0.0001369293],"domain_scores_gemma":[0.99959874,0.000013197796,0.0002069543,0.0001269277,0.0000027652084,0.00005141595],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000104773426,0.00013169831,0.00016621973,0.000020459349,0.00006245664,0.000005793075,0.000109930275,0.000097037875,0.000044741922],"category_scores_gemma":[0.000005075935,0.000094386975,0.00002570637,0.00008988146,0.00043768558,0.000051218027,0.00009110246,0.00006209835,0.000012063439],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051222956,0.00006870482,0.004359154,0.0000034990396,0.000009172042,1.8937935e-7,0.0010623343,0.000005307044,0.99242127,0.000031189087,0.00001458774,0.001973384],"study_design_scores_gemma":[0.0001981252,0.000053594198,0.26100433,0.0000031479278,0.000013312994,0.000012150777,0.00015249262,0.0000017720839,0.73824924,0.00006491449,0.00017155801,0.00007538772],"about_ca_topic_score_codex":0.000009406871,"about_ca_topic_score_gemma":0.0000047248172,"teacher_disagreement_score":0.25664517,"about_ca_system_score_codex":0.00004381152,"about_ca_system_score_gemma":0.0000026848609,"threshold_uncertainty_score":0.3848989},"labels":[],"label_agreement":null},{"id":"W2163404894","doi":"10.1139/w05-111","title":"Occurrence and expression of<i>crdA</i>and<i>cprA5</i>encoding chloroaromatic reductive dehalogenases in<i>Desulfitobacterium</i>strains","year":2006,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Strain (injury); Gene; Biology; Bacteria; Microbiology; Chemistry; Biochemistry; Molecular biology; Genetics","score_opus":0.008393299020669357,"score_gpt":0.19311533068845455,"score_spread":0.1847220316677852,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2163404894","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988208,0.00041076468,0.000006957166,0.00014332792,0.00019374443,0.00007863072,0.00018129882,0.0000017660051,0.00016272497],"genre_scores_gemma":[0.9993785,0.00007115428,0.0004043673,0.00009095194,0.00002635437,3.7435052e-7,0.0000150149735,0.0000031956126,0.000010100579],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99907875,0.00007913927,0.0004066163,0.00015555692,0.00003615941,0.00024375698],"domain_scores_gemma":[0.99942094,0.000041960848,0.00027655944,0.0000715897,0.0000195533,0.00016936791],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002549904,0.00011358763,0.00022761922,0.00012465884,0.00005405119,0.000013792776,0.0001356075,0.00009532407,0.00020331512],"category_scores_gemma":[0.00006667213,0.00009504283,0.000032620566,0.00012831362,0.00046443273,0.00011651468,0.000029230363,0.00013167821,0.0000073815504],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010841929,0.000012098159,0.075040825,0.0000069799507,0.0000024751876,0.000023278606,0.00028615815,0.000009301988,0.9226072,0.0000046360756,0.0015512842,0.00044493144],"study_design_scores_gemma":[0.0010197181,0.0002325052,0.32987645,0.00020607251,0.00002315903,0.0011340083,0.00041963125,0.0000035232893,0.6617675,0.00015544806,0.0048476076,0.00031438257],"about_ca_topic_score_codex":0.0022581464,"about_ca_topic_score_gemma":0.017207468,"teacher_disagreement_score":0.2608397,"about_ca_system_score_codex":0.000097288015,"about_ca_system_score_gemma":0.00011171383,"threshold_uncertainty_score":0.96021706},"labels":[],"label_agreement":null},{"id":"W2164388141","doi":"10.1021/ac8025515","title":"Methods for Recovery of Microorganisms and Intact Microbial Polar Lipids from Oil−Water Mixtures: Laboratory Experiments and Natural Well-Head Fluids","year":2009,"lang":"en","type":"article","venue":"Analytical Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Nexen (Canada); University of Calgary","funders":"Natural Environment Research Council; Sight Research UK","keywords":"Chemistry; Microorganism; Polar; Chromatography; Environmental chemistry; Petroleum engineering; Bacteria","score_opus":0.00706492262745243,"score_gpt":0.2725418172041814,"score_spread":0.26547689457672896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164388141","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985669,0.00033938268,0.00014405516,0.00032571636,0.00007644772,0.000058969952,0.00009983333,0.000014818678,0.00037386324],"genre_scores_gemma":[0.9819033,0.00008809062,0.016079223,0.0011044153,0.00010252587,9.897033e-7,0.000097259064,0.000012036112,0.0006121218],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989965,0.00003474941,0.00026534765,0.00036370338,0.00010048335,0.00023919722],"domain_scores_gemma":[0.99959296,0.000053323845,0.000051403586,0.0001626167,0.00001699682,0.00012271934],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018327251,0.00017669782,0.0002455852,0.000013016273,0.00005827605,0.000036442958,0.0001312869,0.00018520083,0.000952409],"category_scores_gemma":[0.00006148381,0.0001374747,0.000060547747,0.000075160926,0.00018522052,0.0000997233,0.00008990403,0.00012879848,0.000015919342],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008712171,0.000056650842,0.0007001837,0.00001790111,0.00002279932,9.538854e-7,0.00009641592,1.2727172e-7,0.99439865,8.5612083e-7,0.0018639874,0.0027543632],"study_design_scores_gemma":[0.0005234752,0.00004066551,0.0019159497,0.000015895184,0.00003786734,0.0000026715327,0.00003242403,0.00009056759,0.9912235,0.00006910541,0.0058617024,0.00018614756],"about_ca_topic_score_codex":0.000045254215,"about_ca_topic_score_gemma":0.000002927535,"teacher_disagreement_score":0.016663574,"about_ca_system_score_codex":0.000059630605,"about_ca_system_score_gemma":0.000011881396,"threshold_uncertainty_score":0.99996084},"labels":[],"label_agreement":null},{"id":"W2164417708","doi":"10.1021/es4036072","title":"Rapid Degradation of <i>Deepwater Horizon</i> Spilled Oil by Indigenous Microbial Communities in Louisiana Saltmarsh Sediments","year":2013,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":121,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Scarborough Hospital; University of Toronto; McMaster University","funders":"Government of Canada; Ontario Genomics Institute; Genome Canada","keywords":"Salt marsh; Environmental science; Biodegradation; Petroleum; Microbial population biology; Environmental chemistry; Bay; Oil spill; Environmental engineering; Oceanography; Ecology; Geology; Chemistry; Biology","score_opus":0.00460439408950587,"score_gpt":0.18162280557883195,"score_spread":0.1770184114893261,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164417708","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99785054,0.00009258931,0.000012790267,0.00033664986,0.00013226774,0.00029718093,0.000039638635,0.000045501143,0.0011928371],"genre_scores_gemma":[0.9981753,0.0003090499,0.0007485603,0.00021602915,0.0000063544335,0.000020559304,0.000054975073,0.00001300276,0.00045617353],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980782,0.00005465972,0.0004385399,0.0003917304,0.00043272227,0.00060413196],"domain_scores_gemma":[0.99927676,0.000016198668,0.00019587328,0.00040515527,0.0000044428266,0.000101599835],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00038658126,0.00021207026,0.00022830449,0.00029897827,0.00021242199,0.000032768632,0.00088888506,0.00018357542,0.0054261396],"category_scores_gemma":[0.000013615894,0.00019209892,0.00003815429,0.0008725658,0.0027710407,0.00048674844,0.000564067,0.00022850854,0.0010499022],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006651298,0.0002218885,0.077541634,0.0000024145588,0.0000027830938,0.0000010667662,0.00039915714,0.000008597563,0.87371725,0.0000034646914,0.00065654743,0.047438536],"study_design_scores_gemma":[0.00089269824,0.0003366731,0.033683967,0.000016722548,0.000006914219,0.00001365064,0.001676219,0.00006471468,0.95229626,0.00008465115,0.010551554,0.00037599757],"about_ca_topic_score_codex":0.0012535154,"about_ca_topic_score_gemma":0.00018291984,"teacher_disagreement_score":0.07857898,"about_ca_system_score_codex":0.00056070567,"about_ca_system_score_gemma":0.000019143754,"threshold_uncertainty_score":0.99994284},"labels":[],"label_agreement":null},{"id":"W2164500974","doi":"10.1128/aem.67.10.4874-4879.2001","title":"Physical and Metabolic Interactions of <i>Pseudomonas</i> sp. Strain JA5-B45 and <i>Rhodococcus</i> sp. Strain F9-D79 during Growth on Crude Oil and Effect of a Chemical Surfactant on Them","year":2001,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":127,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Pulmonary surfactant; Chemistry; Rhodococcus; Strain (injury); Microbiology; Biodegradation; Nonylphenol; Chromatography; Biochemistry; Organic chemistry; Biology; Environmental chemistry","score_opus":0.005192767381446522,"score_gpt":0.19357483525441146,"score_spread":0.18838206787296494,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164500974","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99839973,0.000052309013,8.026056e-7,0.00009477562,0.000028645189,0.0001720423,0.00050412904,0.000012020397,0.00073553843],"genre_scores_gemma":[0.99881583,0.0007961464,0.00007230989,0.0001598352,0.00002618916,0.0000072312505,0.00007527795,0.000016945818,0.000030249554],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99878234,0.00007297957,0.0002743573,0.00050196005,0.00008210701,0.0002862693],"domain_scores_gemma":[0.9994332,0.000159769,0.00014138473,0.00013861485,0.0000011685216,0.00012583507],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014560646,0.0002964194,0.00044184565,0.00003534985,0.00007528448,0.000011493262,0.00009019143,0.00012089271,0.00016653891],"category_scores_gemma":[0.0000076674505,0.00023300573,0.000049468093,0.00006483076,0.0008647688,0.00005745211,0.00020067005,0.00019882344,0.000019637515],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029052878,0.00019356418,0.019114595,0.00002913347,0.00003267468,0.00000334842,0.0002682434,0.000001847067,0.9750535,0.00006165555,0.000027307029,0.0049236184],"study_design_scores_gemma":[0.0016125634,0.0002515067,0.06315714,0.000021293008,0.000047004836,0.00011071933,0.00010967137,0.00000882843,0.9339458,0.000051678115,0.0004418667,0.00024195171],"about_ca_topic_score_codex":0.00003870517,"about_ca_topic_score_gemma":0.000009588412,"teacher_disagreement_score":0.044042546,"about_ca_system_score_codex":0.000035307417,"about_ca_system_score_gemma":0.0000024964747,"threshold_uncertainty_score":0.9501698},"labels":[],"label_agreement":null},{"id":"W2165259044","doi":"10.1139/w03-071","title":"The concentrations of hexadecane and inorganic nutrients modulate the production of extracellular membrane-bound vesicles, soluble protein, and bioemulsifier by <i>Acinetobacter venetianus</i> RAG-1 and <i>Acinetobacter</i> sp. strain HO1-N","year":2003,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"United States Agency for International Development; National Science Foundation","keywords":"Hexadecane; Vesicle; Biochemistry; Acinetobacter; Alkane; Bacteria; Substrate (aquarium); Extracellular; Nutrient; Strain (injury); Chemistry; Biology; Microbiology; Food science; Membrane; Ecology; Organic chemistry; Catalysis","score_opus":0.00634811253961762,"score_gpt":0.1731522273662208,"score_spread":0.16680411482660318,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165259044","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99553466,0.0027013773,0.000006678752,0.0011012766,0.0002115345,0.00031903764,0.000099908095,0.000001337505,0.000024178607],"genre_scores_gemma":[0.99908996,0.00047418397,0.000067876164,0.000120895966,0.0000204983,8.6809297e-7,0.000010721016,0.000008092701,0.0002069213],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989132,0.00017801845,0.00042091217,0.00017557023,0.000058411042,0.0002538741],"domain_scores_gemma":[0.9992272,0.00004081872,0.0003567763,0.00014087869,0.000048301015,0.00018602794],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050763576,0.00012986442,0.00019737973,0.000035324712,0.00019029879,0.00003264071,0.0001384284,0.00009885543,0.000107405904],"category_scores_gemma":[0.00009027532,0.00008430393,0.000027510401,0.00013024283,0.00097065256,0.00009627524,0.00001994547,0.00015892369,0.0000016282105],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001975745,0.000014228755,0.01300607,0.000010463381,0.000024782625,0.0000019767049,0.0002933097,0.0000039250676,0.98413163,0.000033445904,0.001984434,0.00047598634],"study_design_scores_gemma":[0.0008059495,0.00022728635,0.013245773,0.000045494762,0.00004567799,0.0003943276,0.0002742697,0.0000042532665,0.9101305,0.000071614384,0.074597165,0.00015771462],"about_ca_topic_score_codex":0.0005475718,"about_ca_topic_score_gemma":0.0053933547,"teacher_disagreement_score":0.07400115,"about_ca_system_score_codex":0.000051260864,"about_ca_system_score_gemma":0.00012436336,"threshold_uncertainty_score":0.35764098},"labels":[],"label_agreement":null},{"id":"W2165607897","doi":"10.1099/mic.0.26154-0","title":"rhlA is required for the production of a novel biosurfactant promoting swarming motility in Pseudomonas aeruginosa: 3-(3-hydroxyalkanoyloxy)alkanoic acids (HAAs), the precursors of rhamnolipids","year":2003,"lang":"en","type":"article","venue":"Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":498,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Rhamnolipid; Swarming motility; Chemistry; Rhamnose; Pseudomonas aeruginosa; Operon; Extracellular; Mutant; Swarming (honey bee); Microbiology; Motility; Biosynthesis; Overproduction; Biochemistry; Bacteria; Biology; Enzyme; Cell biology; Gene; Virulence; Quorum sensing; Galactose; Genetics","score_opus":0.019692210491317846,"score_gpt":0.24083532709491662,"score_spread":0.22114311660359878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165607897","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99630624,0.00012930734,0.00025228958,0.0011863563,0.00055220776,0.0012965557,0.00011644531,0.000017121418,0.0001434568],"genre_scores_gemma":[0.99844253,0.000045522494,0.0010914834,0.00017305759,0.00002780399,0.000024923193,0.000013336708,0.000015405303,0.0001659423],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980011,0.00020378483,0.000724173,0.0005120495,0.00011170955,0.0004471688],"domain_scores_gemma":[0.998737,0.00024544177,0.0004616099,0.00047439468,0.00004468531,0.000036898185],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015899859,0.00023298385,0.00034821627,0.000055522283,0.00014789663,0.000009869918,0.0004305568,0.0001882786,0.00021716647],"category_scores_gemma":[0.000601904,0.0001417281,0.00013450845,0.0005083129,0.0007372762,0.000099394325,0.00012927732,0.00017818826,0.000012843524],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054331587,0.00023234864,0.025241554,0.000037290905,0.000025068633,1.5923378e-7,0.0019774823,0.000074765645,0.97112125,0.000050789742,0.0003889145,0.00079604],"study_design_scores_gemma":[0.0006819066,0.00013712492,0.011647919,0.000039978546,0.000029510176,0.000025516716,0.0002742588,0.00029273966,0.98241866,0.00005091925,0.0042438526,0.00015761565],"about_ca_topic_score_codex":0.0002001405,"about_ca_topic_score_gemma":0.0002495397,"teacher_disagreement_score":0.0135936355,"about_ca_system_score_codex":0.00012197075,"about_ca_system_score_gemma":0.000049858223,"threshold_uncertainty_score":0.5779504},"labels":[],"label_agreement":null},{"id":"W2165619344","doi":"10.1139/w01-140","title":"Total microbial activity and microbial composition of a mangrove sediment are reduced by oil pollution at a site in the Arabian Gulf","year":2002,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Sediment; Environmental chemistry; Mangrove; Aerobic bacteria; Pollution; Anaerobic bacteria; Anaerobic exercise; Chemistry; Bacteria; Biology; Environmental science; Ecology","score_opus":0.007741063392523434,"score_gpt":0.1808948794912787,"score_spread":0.17315381609875527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165619344","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947257,0.00020715091,0.0000032529636,0.004133856,0.00024637821,0.000103547805,0.00043097252,0.0000018394155,0.00014728929],"genre_scores_gemma":[0.9987138,0.000045508856,0.000065264794,0.00091335026,0.000043809483,5.83171e-7,0.000024389605,0.0000069448765,0.00018637007],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99884045,0.0002271952,0.00036213006,0.00019051044,0.000060113252,0.00031962892],"domain_scores_gemma":[0.99927455,0.000027481123,0.00039045315,0.00011568136,0.000020802325,0.00017104611],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003043108,0.00014900282,0.0002484996,0.00011351985,0.000115410825,0.000019774014,0.00018892664,0.00015896396,0.00097629474],"category_scores_gemma":[0.000018488916,0.00011919866,0.000078388715,0.00016435284,0.00037534037,0.00009786599,0.000037740636,0.00021318281,0.000050402756],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005626051,0.000056845634,0.0044654896,0.0000060407256,0.000011398774,0.00002319916,0.000994911,0.000014376834,0.9558796,6.576281e-7,0.037619334,0.0008718669],"study_design_scores_gemma":[0.0037683006,0.00057890534,0.10462802,0.00014491247,0.00006885573,0.004038629,0.00032803888,0.000041441665,0.8498756,0.000007271561,0.035964362,0.00055560376],"about_ca_topic_score_codex":0.0034464563,"about_ca_topic_score_gemma":0.037428617,"teacher_disagreement_score":0.10600396,"about_ca_system_score_codex":0.0004888672,"about_ca_system_score_gemma":0.000038792226,"threshold_uncertainty_score":0.99993694},"labels":[],"label_agreement":null},{"id":"W2165785525","doi":"10.2134/jeq2010.0286","title":"Solubilization of Mixed Polycyclic Aromatic Hydrocarbons through a Rhamnolipid Biosurfactant","year":2011,"lang":"en","type":"article","venue":"Journal of Environmental Quality","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Water Network","keywords":"Phenanthrene; Chemistry; Solubility; Pyrene; Solubilization; Compost; Rhamnolipid; Dissolved organic carbon; Environmental chemistry; Micelle; Hydrocarbon; Critical micelle concentration; Chromatography; Aqueous solution; Organic chemistry; Biochemistry","score_opus":0.03957616922484474,"score_gpt":0.25108830414273703,"score_spread":0.21151213491789228,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165785525","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973276,0.00007130329,0.00031982138,0.00006913394,0.00028389704,0.00013108723,0.00001943766,0.000008495077,0.0017692089],"genre_scores_gemma":[0.9968085,0.00016251874,0.0027903635,0.00012951937,0.000030378129,5.576937e-7,0.000004786582,0.000013482373,0.00005984772],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977158,0.00022340858,0.0010854198,0.00018721951,0.0005597566,0.00022845197],"domain_scores_gemma":[0.9984161,0.000051093473,0.0011502544,0.0002494782,0.0000011344326,0.00013189025],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00069385685,0.00017933466,0.0003478801,0.000041274143,0.000058419093,0.000007712327,0.0002929724,0.000106083615,0.0016820794],"category_scores_gemma":[0.0000658431,0.00014478619,0.00019616779,0.00015157621,0.00035313462,0.0003697798,0.00010495775,0.00014686059,0.00014256648],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009866784,0.0006684535,0.15419081,0.0000062796985,0.000037914964,0.000004540128,0.0014797301,0.0000027198976,0.8419397,0.000010759282,0.00021557376,0.0013448526],"study_design_scores_gemma":[0.0006764266,0.0002763421,0.6869185,0.000022684237,0.000044623852,0.000030963147,0.0004380959,0.000017967819,0.30973938,0.0009794917,0.00066122564,0.00019430144],"about_ca_topic_score_codex":0.00012667685,"about_ca_topic_score_gemma":0.0000315631,"teacher_disagreement_score":0.5327277,"about_ca_system_score_codex":0.0001920487,"about_ca_system_score_gemma":0.000013790219,"threshold_uncertainty_score":0.9992305},"labels":[],"label_agreement":null},{"id":"W2165886940","doi":"10.1007/s10532-006-9080-8","title":"Selectivity among organic sulfur compounds in one- and two-liquid-phase cultures of Rhodococcus sp. strain JVH1","year":2006,"lang":"en","type":"article","venue":"Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Benzothiophene; Sulfur; Rhodococcus; Chemistry; Sulfone; Sulfide; Biodegradation; Selectivity; Toluene; Organic chemistry; Strain (injury); Rhodococcus rhodochrous; Degradation (telecommunications); Thiophene; Catalysis; Enzyme","score_opus":0.013314827355798278,"score_gpt":0.2494715142803364,"score_spread":0.23615668692453812,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165886940","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998606,0.000019331148,0.00013956706,0.00013714784,0.000034565426,0.00020041585,0.00005936512,0.000021428203,0.0007821402],"genre_scores_gemma":[0.9992987,0.000012818863,0.00041780595,0.000037306796,0.000021042173,0.0000016674346,0.00011300825,0.0000053966473,0.00009229054],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99916595,0.00006843376,0.00022993117,0.00021859792,0.00017136757,0.00014572366],"domain_scores_gemma":[0.99971455,0.000020151012,0.00012225303,0.00009386935,0.000010860842,0.000038318187],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023476881,0.000102524275,0.00012516686,0.00004332322,0.00004681266,0.000022961158,0.00007473292,0.000065853455,0.00033394518],"category_scores_gemma":[0.00002352001,0.000092994196,0.000019719662,0.00030240222,0.00013082573,0.00020205058,0.000036480276,0.00006657301,0.000019439047],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003010132,0.00015696045,0.16690952,0.0000046370674,0.0000018763856,5.928796e-7,0.0000717222,0.000008604826,0.8312982,0.00003305223,0.00034121276,0.0011435517],"study_design_scores_gemma":[0.0008206753,0.00007415767,0.5951952,0.000007644481,0.0000054735415,0.0000010300255,0.000024310057,0.0001724043,0.40328118,0.00006483439,0.0002470047,0.00010608158],"about_ca_topic_score_codex":0.0021059592,"about_ca_topic_score_gemma":0.010414973,"teacher_disagreement_score":0.4282857,"about_ca_system_score_codex":0.000099623925,"about_ca_system_score_gemma":0.000011090213,"threshold_uncertainty_score":0.5811799},"labels":[],"label_agreement":null},{"id":"W2166641274","doi":"10.1002/jctb.2226","title":"Comparing phenanthrene degradation by alginate‐encapsulated and free <i>Pseudomonas</i> sp. UG14Lr cells in heavy metal contaminated soils","year":2009,"lang":"en","type":"article","venue":"Journal of Chemical Technology & Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Ministry of Agriculture, Food and Rural Affairs","funders":"","keywords":"Phenanthrene; Biodegradation; Chemistry; Environmental chemistry; Soil contamination; Pseudomonas; Bioremediation; Contamination; Metal; Soil water; Bacteria; Environmental science; Organic chemistry; Biology; Soil science; Ecology","score_opus":0.005989490533017677,"score_gpt":0.20392688949573093,"score_spread":0.19793739896271326,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166641274","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9878732,0.00046282803,0.00021807816,0.010960252,0.0000983827,0.00015877135,0.000010280986,0.000116449635,0.00010174412],"genre_scores_gemma":[0.9970418,0.00038765714,0.002253298,0.00026639187,0.000011127146,0.0000010713431,0.000007876886,0.0000113365595,0.000019409112],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99812454,0.00003769796,0.0007801494,0.00036590302,0.00023035594,0.00046137866],"domain_scores_gemma":[0.9990465,0.000032161846,0.00049145246,0.00029682586,0.000033050794,0.00010000075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003385972,0.00025972477,0.0005913988,0.00036505127,0.00004683429,0.000017131271,0.0006844763,0.0010796265,0.000087547036],"category_scores_gemma":[0.00016992251,0.0002227725,0.000070517264,0.00094486936,0.0008048001,0.00019071593,0.00024628374,0.000913616,0.000022709115],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000073779476,0.00022281038,0.0026359647,0.0000030846552,0.000017519445,0.000041465108,0.000016107459,0.0000025714503,0.9804301,0.00014362163,0.0018690563,0.014543882],"study_design_scores_gemma":[0.0017878737,0.00030468733,0.0010445383,0.000033668206,0.00002727874,0.0002475812,0.00005581965,0.0002117433,0.99225557,0.0023266624,0.0014797153,0.00022483936],"about_ca_topic_score_codex":0.000025780364,"about_ca_topic_score_gemma":0.000013984844,"teacher_disagreement_score":0.014319042,"about_ca_system_score_codex":0.0002079889,"about_ca_system_score_gemma":0.000017508706,"threshold_uncertainty_score":0.90843993},"labels":[],"label_agreement":null},{"id":"W2167540100","doi":"10.1128/aem.01269-06","title":"A 1,1,1-Trichloroethane-Degrading Anaerobic Mixed Microbial Culture Enhances Biotransformation of Mixtures of Chlorinated Ethenes and Ethanes","year":2006,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":109,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Reductive dechlorination; Vinyl chloride; Dehalococcoides; Bioaugmentation; Enrichment culture; Bioremediation; Biotransformation; Chemistry; Desulfovibrio; Biodegradation; Microbial consortium; Environmental chemistry; Trichloroethylene; Microbiology; Propionate; Carbon monoxide dehydrogenase; Bacteria; Microorganism; Biochemistry; Biology; Organic chemistry; Enzyme; Carbon monoxide; Catalysis","score_opus":0.0033706416438358594,"score_gpt":0.16976099815921622,"score_spread":0.16639035651538037,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167540100","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986803,0.00036592316,0.00005834958,0.00004416413,0.00007448874,0.00025026267,0.00015358614,0.000015369333,0.0003575337],"genre_scores_gemma":[0.99807584,0.0006641735,0.0008452866,0.000058185393,0.000021783304,0.0000040205964,0.00025537438,0.000010211309,0.00006512853],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99897814,0.000041382464,0.00038134228,0.00030777004,0.000062250496,0.00022910854],"domain_scores_gemma":[0.9996086,0.000033302356,0.00021244957,0.000099611854,0.0000024403332,0.00004362005],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013427116,0.00021182583,0.0003004763,0.000057593723,0.00007291599,0.0000074940504,0.00010960445,0.00021749403,0.00022119882],"category_scores_gemma":[0.0000026706691,0.00017269442,0.000045066776,0.00011546995,0.0007474638,0.00007579482,0.000094294875,0.00009744105,0.000013847817],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006410855,0.0000830248,0.0040770173,0.000032829434,0.000015854052,5.075937e-7,0.00044701956,0.000021892183,0.9934775,0.00005496399,0.00022053675,0.0015047037],"study_design_scores_gemma":[0.00072298566,0.000092956114,0.016139727,0.0000109375405,0.000027009006,0.0000270896,0.00024387611,0.000011218835,0.9806925,0.00009894174,0.0017428462,0.00018993473],"about_ca_topic_score_codex":0.00025124731,"about_ca_topic_score_gemma":0.0000786938,"teacher_disagreement_score":0.012785064,"about_ca_system_score_codex":0.0000318751,"about_ca_system_score_gemma":0.0000032394332,"threshold_uncertainty_score":0.7042274},"labels":[],"label_agreement":null},{"id":"W2168485389","doi":"10.1128/aem.72.4.2651-2660.2006","title":"The Locus Coding for the 3-Nitrobenzoate Dioxygenase of <i>Comamonas</i> sp. Strain JS46 Is Flanked by IS <i>1071</i> Elements and Is Subject to Deletion and Inversion Events","year":2006,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Insertion sequence; Comamonas; Genetics; Biology; Locus (genetics); Dioxygenase; Plasmid; Direct repeat; Molecular biology; Gene; Transposable element; Bacteria; Pseudomonas","score_opus":0.0037070634305244026,"score_gpt":0.17404045553552994,"score_spread":0.17033339210500553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168485389","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967032,0.0002976016,0.00009193987,0.0009140918,0.000042819927,0.0006666902,0.0012071506,0.0000066757775,0.0000698057],"genre_scores_gemma":[0.9954625,0.0009475486,0.00014560793,0.0030651235,0.000017232438,0.000016348315,0.00016647228,0.000012261213,0.00016694442],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989363,0.0000305442,0.00028096893,0.00037769452,0.00007643404,0.00029806484],"domain_scores_gemma":[0.99957925,0.000079009194,0.00012994352,0.00014152854,0.0000016697705,0.000068601745],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022724636,0.00019379979,0.00016495866,0.00001614972,0.00033721147,0.000019654648,0.0001347176,0.00010151963,0.00014787957],"category_scores_gemma":[0.0000020941359,0.00012853171,0.0000356645,0.000053187116,0.00035992058,0.000040103278,0.00022360332,0.000072861134,0.000025383013],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000806349,0.000037399313,0.011778953,0.0000066485027,0.000017449558,1.4930949e-7,0.0001926125,0.0000010252141,0.9654652,0.000007999464,0.017927686,0.0044842535],"study_design_scores_gemma":[0.002040306,0.00019626693,0.027935468,0.0000096896265,0.00005328076,0.000012480056,0.0005150034,0.00008703272,0.8571341,0.00025359128,0.11141574,0.00034703023],"about_ca_topic_score_codex":0.00013165237,"about_ca_topic_score_gemma":0.000057579044,"teacher_disagreement_score":0.10833107,"about_ca_system_score_codex":0.00005232763,"about_ca_system_score_gemma":0.000002472327,"threshold_uncertainty_score":0.5241371},"labels":[],"label_agreement":null},{"id":"W2168936220","doi":"10.1128/aem.67.2.821-826.2001","title":"Purification, Stability, and Mineralization of 3-Hydroxy-2- Formylbenzothiophene, a Metabolite of Dibenzothiophene","year":2001,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Department of Biotechnology, Ministry of Science and Technology, India","keywords":"Metabolite; Dibenzothiophene; Biodegradation; Benzothiophene; Chemistry; Mineralization (soil science); Bacteria; Toluene; Chromatography; Organic chemistry; Environmental chemistry; Biochemistry; Biology; Catalysis","score_opus":0.006407601559535211,"score_gpt":0.1747421454025892,"score_spread":0.168334543843054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168936220","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99805677,0.00020664651,0.000117056195,0.000067263725,0.000027822043,0.00022677534,0.00011499569,0.000007984771,0.0011746584],"genre_scores_gemma":[0.99808854,0.0008469014,0.0006867384,0.00014480545,0.00000708675,0.0000047630438,0.00014988758,0.000008753996,0.00006255224],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99910754,0.000030793097,0.00034391638,0.0002932623,0.000057391193,0.00016708295],"domain_scores_gemma":[0.9995768,0.000025129308,0.00017829453,0.00015779326,0.0000022165204,0.000059746308],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001498992,0.0001403228,0.00023010498,0.000030849184,0.000045359164,0.0000043015034,0.00008942686,0.00011150086,0.0009104944],"category_scores_gemma":[0.000004891745,0.00012258449,0.000027796696,0.000093826646,0.0005717949,0.00006572681,0.00014424375,0.00004921625,0.00001615238],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003317859,0.000090385875,0.08449489,0.000011740199,0.000010334884,1.616901e-7,0.0002676325,0.0000055482847,0.9135123,0.0002874308,0.000033105338,0.0012532949],"study_design_scores_gemma":[0.000809293,0.000082496794,0.20462136,0.0000041223843,0.000032757187,0.000026564354,0.00022869626,0.00004519917,0.78794926,0.0003705965,0.005621811,0.00020786132],"about_ca_topic_score_codex":0.000082567734,"about_ca_topic_score_gemma":0.000033158623,"teacher_disagreement_score":0.12556306,"about_ca_system_score_codex":0.000025371792,"about_ca_system_score_gemma":0.000002970439,"threshold_uncertainty_score":0.99692756},"labels":[],"label_agreement":null},{"id":"W2169104069","doi":"10.1111/j.1574-6941.2001.tb00839.x","title":"Geographic distribution of Desulfitobacterium frappieri PCP-1 and Desulfitobacterium spp. in soils from the province of Quebec, Canada","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Biology; Soil water; Polymerase chain reaction; Soil microbiology; Ribosomal RNA; 16S ribosomal RNA; Bacteria; Ecology; Gene; Genetics","score_opus":0.00436407518103048,"score_gpt":0.17272460472420212,"score_spread":0.16836052954317163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169104069","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976972,0.000084048326,0.000011459247,0.00091311877,0.00037467224,0.0002907468,0.00057269144,0.00000774743,0.00004831382],"genre_scores_gemma":[0.99886644,0.00015771923,0.00004384378,0.00039317543,0.000025737296,0.000005229299,0.00041573687,0.0000064069304,0.00008572899],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985949,0.00019242769,0.00047450812,0.00033722245,0.000049773724,0.0003511594],"domain_scores_gemma":[0.9992075,0.00019128063,0.00029490827,0.00023053565,0.000021008573,0.000054787153],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002276137,0.00016726521,0.00032232993,0.000027308668,0.00005634656,0.000005946273,0.0002853965,0.0002312319,0.0006654385],"category_scores_gemma":[0.00007124394,0.0001272016,0.00003992712,0.00021680306,0.0007568987,0.00006191062,0.00018924955,0.00015518077,0.00001660005],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052156796,0.000040289004,0.5283447,0.0000024148692,0.000011050417,0.0000062165846,0.000030672367,0.0000060577104,0.46858487,0.0000025746397,0.0025018281,0.00041717186],"study_design_scores_gemma":[0.00045650563,0.000058247766,0.95879036,0.000008892275,0.000009646748,0.000014408937,0.00006196563,0.000006933589,0.02752459,0.000022869723,0.012919092,0.00012650379],"about_ca_topic_score_codex":0.5803265,"about_ca_topic_score_gemma":0.9876924,"teacher_disagreement_score":0.44106027,"about_ca_system_score_codex":0.00017146216,"about_ca_system_score_gemma":0.00015139047,"threshold_uncertainty_score":0.7286085},"labels":[],"label_agreement":null},{"id":"W2169108184","doi":"10.1128/aem.01217-10","title":"Functional Characterization of pGKT2, a 182-Kilobase Plasmid Containing the <i>xplAB</i> Genes, Which Are Involved in the Degradation of Hexahydro-1,3,5-Trinitro-1,3,5-Triazine by <i>Gordonia</i> sp. Strain KTR9","year":2010,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"U.S. Army Corps of Engineers; Genome British Columbia; Strategic Environmental Research and Development Program; U.S. Department of Health and Human Services; National Institutes of Health; National Institute of Allergy and Infectious Diseases","keywords":"Plasmid; Biology; Gene; Degradation (telecommunications); Genetics; Computational biology; Computer science","score_opus":0.006178240076862307,"score_gpt":0.16708447002666527,"score_spread":0.16090622994980297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169108184","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997632,0.000036224552,0.000051078354,0.0005124545,0.00012585991,0.0004647678,0.0010417355,0.0000085916045,0.00012726133],"genre_scores_gemma":[0.996683,0.00016517931,0.00008593062,0.0008660872,0.00003450822,0.000019998273,0.002099627,0.000012224999,0.000033455326],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99869806,0.000108419415,0.00046053997,0.00034773734,0.00013422986,0.0002509996],"domain_scores_gemma":[0.99924076,0.000112162386,0.0003716032,0.00022396888,0.000004972155,0.000046540812],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047316228,0.00021182727,0.0002506907,0.000036032587,0.00011579924,0.000013723005,0.00024343428,0.00018611773,0.0004894898],"category_scores_gemma":[0.000014265006,0.00014270974,0.000037459544,0.00021221695,0.00053090206,0.000081099024,0.00013002838,0.00027135594,0.00003483405],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011682359,0.00017306226,0.055315934,0.0000067840856,0.000012293215,4.7498588e-7,0.00013914781,0.000010294442,0.9427936,0.000049155813,0.00037167274,0.0010107233],"study_design_scores_gemma":[0.0022427686,0.00014855721,0.2465178,0.00001080606,0.000038535065,0.000030858224,0.00096082845,0.00007467233,0.73613304,0.000036989502,0.013484077,0.00032104336],"about_ca_topic_score_codex":0.00007346609,"about_ca_topic_score_gemma":0.00040748555,"teacher_disagreement_score":0.20666057,"about_ca_system_score_codex":0.000040860657,"about_ca_system_score_gemma":0.000013220169,"threshold_uncertainty_score":0.58195347},"labels":[],"label_agreement":null},{"id":"W2169382993","doi":"10.1111/j.1574-6941.2002.tb00975.x","title":"Prevalence of alkane monooxygenase genes in Arctic and Antarctic hydrocarbon-contaminated and pristine soils1","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":158,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Ministère de la Défense Nationale; Public Works and Government Services Canada","keywords":"AlkB; Biology; Microbiology; Pseudomonas putida; Bacteria; Mesophile; Gene; Genetics; Escherichia coli","score_opus":0.0073835876618914,"score_gpt":0.1855330535533683,"score_spread":0.1781494658914769,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169382993","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99844575,0.0006795439,0.0000014718592,0.00034987982,0.00011045299,0.00025053514,0.000029254785,0.000013324966,0.00011980245],"genre_scores_gemma":[0.99781984,0.0013019777,0.00020009832,0.00027584613,0.000009991591,0.00000553084,0.000011466086,0.000007655537,0.00036760527],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99880874,0.00013054065,0.0003262066,0.00039580872,0.000026548656,0.00031214792],"domain_scores_gemma":[0.99954087,0.00010211879,0.00014341937,0.00013809849,0.000008976067,0.000066535096],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00019867679,0.00015483411,0.00026415734,0.00007212408,0.00004223497,0.000004198796,0.00012422094,0.00019965597,0.001687849],"category_scores_gemma":[0.000067315814,0.00014048333,0.000019838695,0.00013087183,0.0006420085,0.00005559259,0.0001705489,0.00012686962,0.00008114702],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015865266,0.00006556877,0.45872468,0.00003078069,0.000006323859,0.000009559145,0.00019846638,0.0000025059549,0.5400128,0.0000017820465,0.00011073565,0.00082098396],"study_design_scores_gemma":[0.0011015708,0.00033439172,0.9544555,0.00001879185,0.000022641882,0.00023631415,0.000028394485,0.0004549986,0.04236538,0.00003648496,0.0007285694,0.00021695394],"about_ca_topic_score_codex":0.00025402303,"about_ca_topic_score_gemma":0.0009925335,"teacher_disagreement_score":0.49764737,"about_ca_system_score_codex":0.000066036504,"about_ca_system_score_gemma":0.0000054904567,"threshold_uncertainty_score":0.9992247},"labels":[],"label_agreement":null},{"id":"W2169629692","doi":"10.1128/aem.68.7.3449-3454.2002","title":"<i>tfdA</i> -Like Genes in 2,4-Dichlorophenoxyacetic Acid-Degrading Bacteria Belonging to the <i>Bradyrhizobium-Agromonas-Nitrobacter-Afipia</i> Cluster in α- <i>Proteobacteria</i>","year":2002,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Proteobacteria; Biology; Bradyrhizobium; Gene; Genetics; Microbiology; 16S ribosomal RNA; Rhizobium","score_opus":0.0051983267218182975,"score_gpt":0.16047658191268233,"score_spread":0.15527825519086402,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169629692","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99657685,0.00017730072,0.000017852439,0.0013361565,0.0002578694,0.00086755684,0.00010305354,0.00003064841,0.00063272665],"genre_scores_gemma":[0.99376047,0.00030693936,0.0005655258,0.004883266,0.0000674392,0.00006701992,0.0001138089,0.00003820618,0.00019735152],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99760926,0.0001278794,0.0005384861,0.0008205401,0.00010712935,0.0007966845],"domain_scores_gemma":[0.9992972,0.00005169884,0.0001221435,0.0003599092,0.0000012089819,0.00016781504],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00031907615,0.00042142827,0.00038706444,0.00009935524,0.00017520585,0.000058745612,0.00041830234,0.00022388395,0.0019957158],"category_scores_gemma":[0.000005587852,0.00033153308,0.000058064907,0.00029777904,0.00035230303,0.00013700227,0.0005767104,0.0003057871,0.0012704473],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049587485,0.00013513592,0.027768014,0.000006153678,0.000007396534,0.0000076052615,0.0007786251,0.000029031238,0.9660086,0.000006034151,0.0010879331,0.0041159033],"study_design_scores_gemma":[0.0057043345,0.00036801488,0.22208431,0.000079546444,0.00005075799,0.00034158412,0.00092275586,0.00026141744,0.5815428,0.00009598885,0.18627706,0.0022714534],"about_ca_topic_score_codex":0.00014632643,"about_ca_topic_score_gemma":0.00072641805,"teacher_disagreement_score":0.3844658,"about_ca_system_score_codex":0.00031092908,"about_ca_system_score_gemma":0.0000038775997,"threshold_uncertainty_score":0.9999137},"labels":[],"label_agreement":null},{"id":"W2172202523","doi":"","title":"In-situ Caged Wood Frog (Rana sylvatica) Survival and Development in Wetlands Formed from Oil Sands Process- Affected Materials (OSPM)","year":2009,"lang":"en","type":"article","venue":"University Library - University of Saskatchewan (University of Saskatchewan)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Syncrude; Suncor Energy Incorporated","keywords":"Process (computing); Wetland; Environmental science; Oil sands; Ecology; Biology; Geography; Computer science; Archaeology","score_opus":0.005946212229271172,"score_gpt":0.16146442285634735,"score_spread":0.1555182106270762,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2172202523","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99632,0.0000149327625,0.00009914911,0.0007307558,0.00007527287,0.00025145692,0.00023560617,0.000079068974,0.002193755],"genre_scores_gemma":[0.9925951,0.000113018825,0.004165395,0.00007381165,0.000012933976,1.2819636e-8,0.00022746486,0.000013773873,0.0027984998],"study_design_codex":"qualitative","study_design_gemma":"qualitative","domain_scores_codex":[0.9978338,0.00022339982,0.0002933781,0.00069891394,0.00045140242,0.0004991436],"domain_scores_gemma":[0.9988928,0.000091045265,0.0003717143,0.0003215944,0.000033901,0.0002889809],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00025516225,0.00036633288,0.0007377767,0.00041298146,0.00025957066,0.000020852762,0.00083977013,0.00036760618,0.003234802],"category_scores_gemma":[0.000009353659,0.000496358,0.000105417595,0.0009318536,0.00053958746,0.001985659,0.00045755436,0.00029603517,0.00005321755],"study_design_candidate":"qualitative","study_design_consensus":"qualitative","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035526308,0.0014204038,0.17915598,0.00023999522,0.00021116521,0.0009131168,0.42615727,0.00008291832,0.38042367,0.000015128196,0.0006059917,0.007221756],"study_design_scores_gemma":[0.006524637,0.000184607,0.4396683,0.00019191146,0.00007700725,0.0000027454294,0.5199056,0.0000265419,0.03143136,0.00014608767,0.0011315787,0.0007095742],"about_ca_topic_score_codex":0.014548906,"about_ca_topic_score_gemma":0.06550107,"teacher_disagreement_score":0.3489923,"about_ca_system_score_codex":0.0002823291,"about_ca_system_score_gemma":0.00034720742,"threshold_uncertainty_score":0.9997488},"labels":[],"label_agreement":null},{"id":"W2177644512","doi":"10.1007/s10040-015-1306-6","title":"Distribution of biofilm thickness in porous media and implications for permeability models","year":2015,"lang":"en","type":"article","venue":"Hydrogeology Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"DuPont","keywords":"Biofilm; Permeability (electromagnetism); Porous medium; Porosity; Materials science; Hydrogeology; Soil science; Composite material; Chemistry; Geology; Geotechnical engineering; Bacteria; Membrane","score_opus":0.031443685822406496,"score_gpt":0.25771047579750345,"score_spread":0.22626678997509694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2177644512","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996195,0.000056796758,0.0013770008,0.0019750088,0.00007524902,0.000109068285,0.0000648301,0.0000044483486,0.00014256402],"genre_scores_gemma":[0.9993829,0.00004060527,0.00045050684,0.00006774015,0.000016787204,0.0000026552448,0.000029663348,0.0000023446821,0.0000067742],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993925,0.000054326276,0.00022754942,0.00011625627,0.00006766408,0.0001416673],"domain_scores_gemma":[0.99963444,0.000048781403,0.00010695054,0.00007626589,0.000029116956,0.00010443986],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006165982,0.00005561604,0.00010780702,0.000019992645,0.00004366479,0.000005461459,0.000089617635,0.000085521555,0.00006344479],"category_scores_gemma":[0.00014815734,0.000045976478,0.000021285805,0.000088233544,0.00023604915,0.00011465751,0.000045991055,0.00008906669,0.0000056541594],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007161245,0.00012994629,0.95391214,0.0000051179018,0.000004669689,0.0000012412551,0.0008496514,0.0008842313,0.03898996,0.00082045066,0.0013421543,0.0029888223],"study_design_scores_gemma":[0.0015667109,0.00012313933,0.91296136,0.0000069146467,0.000017111961,0.00037089663,0.00016815447,0.004044847,0.00404455,0.07600401,0.0005386976,0.00015363058],"about_ca_topic_score_codex":0.000051554423,"about_ca_topic_score_gemma":0.00022220447,"teacher_disagreement_score":0.07518356,"about_ca_system_score_codex":0.000080862636,"about_ca_system_score_gemma":0.000030434136,"threshold_uncertainty_score":0.18748663},"labels":[],"label_agreement":null},{"id":"W2182708051","doi":"","title":"In situ treatment of MTBE-contaminated groundwater at two sites in California","year":2002,"lang":"en","type":"article","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Contamination; Groundwater; Environmental science; Environmental chemistry; Environmental remediation; Biodegradation; In situ; Waste management; Human decontamination; Environmental engineering; Chemistry; Ecology; Geology; Engineering; Biology","score_opus":0.016248418046985093,"score_gpt":0.21994678219231142,"score_spread":0.20369836414532633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2182708051","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9890914,0.0000146657985,0.0000011173872,0.0002459318,0.00002367646,0.00013354214,0.0000073016636,0.000007872168,0.010474491],"genre_scores_gemma":[0.99318427,0.00004578556,0.0000953776,0.00016297337,0.000004767045,0.0000021962428,0.000009938225,0.000003583575,0.006491103],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99937415,0.000028195118,0.0001939389,0.00015414697,0.000090490896,0.00015908925],"domain_scores_gemma":[0.99982715,0.000013972027,0.00003222799,0.00008836423,0.0000018198202,0.000036459533],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000051309456,0.00008370419,0.00011380445,0.000037471233,0.000012666623,0.0000046964756,0.000055419,0.000037210473,0.028446183],"category_scores_gemma":[0.0000037431928,0.000058653735,0.000024159168,0.0001566562,0.000050037524,0.00007190034,0.000035605608,0.00001890118,0.0026071041],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009344444,0.00026777096,0.38179618,0.0000010262545,0.0000013212995,0.000009369837,0.0004064065,0.000008645247,0.61567485,0.0000016294556,0.0007338545,0.0010896078],"study_design_scores_gemma":[0.0019620536,0.00016050265,0.29261428,0.0000044536528,0.0000034267173,0.0000034236832,0.000043481563,0.0006562255,0.6936453,0.00001387116,0.01073697,0.00015604036],"about_ca_topic_score_codex":0.001916626,"about_ca_topic_score_gemma":0.038233686,"teacher_disagreement_score":0.08918189,"about_ca_system_score_codex":0.00036289942,"about_ca_system_score_gemma":9.1510054e-7,"threshold_uncertainty_score":0.9981695},"labels":[],"label_agreement":null},{"id":"W2189171396","doi":"","title":"Bioremediation and Ecotoxicity of Drilling Fluids Used for Land-based Drilling","year":2002,"lang":"en","type":"article","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Bioremediation; Ecotoxicity; Loam; Drilling fluid; Biodegradation; Environmental chemistry; Environmental science; Diesel fuel; Waste management; Chemistry; Contamination; Soil water; Drilling; Toxicity; Biology; Ecology; Organic chemistry; Soil science; Materials science","score_opus":0.019469121417571816,"score_gpt":0.2144014208184231,"score_spread":0.19493229940085127,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2189171396","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99422276,0.000015072234,0.0046224566,0.00024537274,0.000072249895,0.00023561993,0.000021051279,0.00002724824,0.0005381534],"genre_scores_gemma":[0.9939982,0.000028262039,0.0055774297,0.00020068666,0.00002672171,0.0000025822785,0.000011470553,0.0000059473073,0.00014869282],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993668,0.0000141986875,0.0001864563,0.00016676333,0.00013101086,0.00013477005],"domain_scores_gemma":[0.99971586,0.0000657973,0.00006861844,0.00008177476,0.000009531317,0.000058409227],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017082435,0.00007806037,0.00010365005,0.00002818609,0.00005542693,0.000012625121,0.000059598628,0.00006132239,0.0019004975],"category_scores_gemma":[0.000041632822,0.000063568725,0.000034758574,0.00010378811,0.00006681089,0.00007919572,0.000019170842,0.000027076472,0.00004313982],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007883948,0.000041724972,0.15630558,0.000012098362,0.0000031101947,1.0738797e-7,0.000116832845,0.00021212104,0.84054303,0.0000097325665,0.0005270122,0.002220776],"study_design_scores_gemma":[0.0009262003,0.00008763549,0.016243543,0.000008980912,0.000010898958,3.2701627e-7,0.000018479237,0.13842875,0.840159,0.000030692194,0.003922479,0.00016299213],"about_ca_topic_score_codex":0.00004093792,"about_ca_topic_score_gemma":0.00016999789,"teacher_disagreement_score":0.14006203,"about_ca_system_score_codex":0.000029282708,"about_ca_system_score_gemma":0.0000023393936,"threshold_uncertainty_score":0.9990119},"labels":[],"label_agreement":null},{"id":"W2189303383","doi":"","title":"Petroleum oil biodegradation by Corynebacterium aquaticum and Pseudomonas aeruginosa strains isolated from the industrial rejection of the refinery of Arzew-Algeria","year":2012,"lang":"en","type":"article","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Biodegradation; Pseudomonas; Oil refinery; Petroleum; Microbiology; Stenotrophomonas; Bacteria; Corynebacterium; Chemistry; Stenotrophomonas maltophilia; Food science; Pseudomonas aeruginosa; Environmental chemistry; Biology; Organic chemistry","score_opus":0.014644276418279938,"score_gpt":0.19630697016649507,"score_spread":0.18166269374821511,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2189303383","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99750465,0.000022764329,0.000056693047,0.00076260645,0.0003504781,0.00008700915,0.00015401814,0.000011930122,0.0010498282],"genre_scores_gemma":[0.9991634,0.000038481292,0.000083940635,0.00014522861,0.00006032331,0.0000011999914,0.000054840017,0.000005314735,0.0004472769],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990631,0.000131836,0.00029570056,0.00013849755,0.00021782033,0.00015309251],"domain_scores_gemma":[0.9994148,0.000063134394,0.00026196864,0.00020132895,0.000009375657,0.0000493731],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00029588057,0.00010694838,0.00012753483,0.000012068057,0.000072612595,0.0000147601795,0.00014456276,0.000112237474,0.0011418839],"category_scores_gemma":[0.000067286,0.00005794923,0.00004081129,0.00017777472,0.00022048157,0.00017235085,0.00008723152,0.00011040377,0.00002098314],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032701686,0.000054437223,0.10776935,0.0000014478653,0.0000099544595,1.7640902e-8,0.0001594093,0.000001060955,0.8837941,0.000011650849,0.005463523,0.0027023102],"study_design_scores_gemma":[0.0011280952,0.00009861416,0.47665888,0.000025093816,0.000059676902,0.0000027003114,0.0004712558,0.00044595622,0.51362497,0.000024484398,0.0072448244,0.00021541811],"about_ca_topic_score_codex":0.0020828317,"about_ca_topic_score_gemma":0.00032323168,"teacher_disagreement_score":0.37016916,"about_ca_system_score_codex":0.000043341417,"about_ca_system_score_gemma":0.000013135037,"threshold_uncertainty_score":0.99977124},"labels":[],"label_agreement":null},{"id":"W2192110968","doi":"","title":"Review of Isolation of Potential Dehalogenase Marine Bacteria that can Degrade 2, 2-Dichloropropionate (2,2-DCP)","year":2013,"lang":"en","type":"article","venue":"Journal of academic and applied studies","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Chemistry; Dehalogenase; Salt (chemistry); Sodium salt; Chlorine; Atrazine; Moisture; Thermal decomposition; Sodium; Environmental chemistry; Nuclear chemistry; Organic chemistry; Inorganic chemistry; Pesticide; Agronomy","score_opus":0.019053635207123224,"score_gpt":0.24775533845958275,"score_spread":0.22870170325245953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2192110968","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917697,0.006498547,0.000025358124,0.001153444,0.000086532935,0.0001765641,0.000007760463,0.0000024990393,0.00027960923],"genre_scores_gemma":[0.89858294,0.10010981,0.0008010614,0.00043473247,0.000037398564,0.0000012471954,0.0000022063912,0.000003835984,0.000026766293],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990758,0.000023777193,0.00050009286,0.00008904424,0.0002052846,0.00010602288],"domain_scores_gemma":[0.99916685,0.000024661025,0.0006645162,0.000051106774,0.00003370722,0.000059149697],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002553257,0.000097612836,0.00031784287,0.000030270043,0.000037112346,0.0000030236768,0.00010552065,0.00006315607,0.00042409266],"category_scores_gemma":[0.00003701049,0.000063737585,0.000050330345,0.000087843146,0.00017738243,0.00009160943,0.00013270631,0.00016214176,0.000005972229],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003063191,0.000023604383,0.01331882,0.0003832291,0.000060496004,5.7978133e-7,0.00022999493,0.0000034678087,0.96904963,0.000018562372,0.005975418,0.0109055815],"study_design_scores_gemma":[0.0022257278,0.0003321065,0.5506914,0.0023342127,0.00037640837,0.00009930372,0.001636753,0.000035985875,0.4363805,0.0015442565,0.0038732484,0.00047008015],"about_ca_topic_score_codex":0.000019052264,"about_ca_topic_score_gemma":0.0000036246026,"teacher_disagreement_score":0.5373726,"about_ca_system_score_codex":0.000023323972,"about_ca_system_score_gemma":0.000009654168,"threshold_uncertainty_score":0.46435174},"labels":[],"label_agreement":null},{"id":"W2209800759","doi":"10.1128/genomea.00489-15","title":"<i>Sphingomonas taxi</i> , Isolated from <i>Cucurbita pepo</i> , Proves to Be a DDE-Degrading and Plant Growth-Promoting Strain","year":2015,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Thompson Rivers University","funders":"Vlaamse regering; Fonds Wetenschappelijk Onderzoek","keywords":"Cucurbita pepo; Strain (injury); Biology; Sphingomonas; Phytoremediation; Botany; Horticulture; Food science; Bacteria; Contamination; 16S ribosomal RNA; Genetics","score_opus":0.026145304202225987,"score_gpt":0.2182709434337977,"score_spread":0.1921256392315717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2209800759","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941731,0.00007802187,0.00010226477,0.0013023813,0.00020845483,0.00051257655,0.0012553164,0.00007161084,0.0022962724],"genre_scores_gemma":[0.9941792,0.0000313039,0.0012856129,0.003555563,0.00008646296,0.000011442512,0.00045196738,0.00002314294,0.00037530213],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.998067,0.00005239848,0.00035336224,0.00057293783,0.00047151343,0.0004827673],"domain_scores_gemma":[0.9991761,0.000019755196,0.00014324635,0.00021144519,0.00002621176,0.00042326382],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041583282,0.00025135413,0.00021463378,0.0000470783,0.00016328474,0.0001372971,0.00029223826,0.00008711508,0.00031664025],"category_scores_gemma":[0.00007360112,0.000229313,0.000033581015,0.00029192795,0.00007773637,0.00030072205,0.0003557131,0.0001295928,0.00039372634],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005226629,0.000084376334,0.030427838,0.000006915605,0.000026044023,0.000017199602,0.005833588,0.000006600061,0.95881987,0.000008005256,0.0038131014,0.0009042035],"study_design_scores_gemma":[0.009602869,0.0028656833,0.116798274,0.00028108258,0.00021239753,0.0000958485,0.006157348,0.0029590745,0.08022042,0.0022375332,0.7738513,0.0047181807],"about_ca_topic_score_codex":0.0009259643,"about_ca_topic_score_gemma":0.000196834,"teacher_disagreement_score":0.87859946,"about_ca_system_score_codex":0.00019007939,"about_ca_system_score_gemma":0.000026906595,"threshold_uncertainty_score":0.9351112},"labels":[],"label_agreement":null},{"id":"W2216930967","doi":"10.1016/j.jenvman.2015.12.021","title":"Physiological and functional diversity of phenol degraders isolated from phenol-grown aerobic granules: Phenol degradation kinetics and trichloroethylene co-metabolic activities","year":2015,"lang":"en","type":"article","venue":"Journal of Environmental Management","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Natural Science Foundation of China; National Science Foundation","keywords":"Phenol; Chemistry; Trichloroethylene; Biodegradation; Population; Environmental chemistry; Kinetics; Microbial biodegradation; Chromatography; Organic chemistry; Microorganism; Bacteria; Biology","score_opus":0.022790969776661296,"score_gpt":0.20105546831958918,"score_spread":0.1782644985429279,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2216930967","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99828106,0.0003988541,0.0005732094,0.00010753961,0.00013450842,0.00019350018,0.000048054317,0.0000076094198,0.00025567945],"genre_scores_gemma":[0.99709386,0.0013190673,0.0012310658,0.00014223662,0.000044681485,0.000001023658,0.000027687765,0.000008767445,0.0001316315],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986114,0.00008753227,0.00037843603,0.00023484758,0.00050887646,0.00017890398],"domain_scores_gemma":[0.999276,0.000032658212,0.00040440485,0.00011126919,0.000005070367,0.00017058557],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020200503,0.00019115488,0.00027698462,0.00007884772,0.00010491488,0.000023369432,0.00014538682,0.00007555348,0.00061740016],"category_scores_gemma":[0.000009125671,0.00015647204,0.00006440027,0.00009620719,0.00037431097,0.00031303926,0.00038628568,0.00013283925,0.000020110752],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00075857993,0.0010889728,0.09169125,0.000022468195,0.00031734243,0.000022273945,0.001452194,0.0003594463,0.8737248,0.000033086464,0.0027931752,0.027736422],"study_design_scores_gemma":[0.003782684,0.00069477083,0.96403664,0.000024699915,0.00027030785,0.000016968104,0.0040847426,0.00020468423,0.023979254,0.00039345288,0.0021854339,0.0003263561],"about_ca_topic_score_codex":0.00004376602,"about_ca_topic_score_gemma":0.000008605651,"teacher_disagreement_score":0.8723454,"about_ca_system_score_codex":0.00015050708,"about_ca_system_score_gemma":0.0000034452273,"threshold_uncertainty_score":0.6760099},"labels":[],"label_agreement":null},{"id":"W2230307905","doi":"","title":"Biopile treatment of hydrocarbon contaminated soil of the Redwater Oil Production Area","year":2010,"lang":"en","type":"article","venue":"Library and Archives Canada (Government of Canada)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Environmental science; Soil contamination; Contamination; Hydrocarbon; Production (economics); Oil sludge; Petroleum; Waste management; Soil water; Environmental chemistry; Petroleum engineering; Soil science; Chemistry; Geology; Engineering","score_opus":0.0024343337268054087,"score_gpt":0.12295622416819486,"score_spread":0.12052189044138946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2230307905","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9638066,0.0000097413995,2.5736523e-7,0.0014343719,0.00022455011,0.00007260151,0.00007500293,0.0000022834324,0.03437455],"genre_scores_gemma":[0.9937148,0.000053456242,0.000059576592,0.00009614277,0.000013461627,0.0000014108579,0.000003554852,0.0000047743906,0.006052799],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99897695,0.000025372334,0.00018964338,0.00013544945,0.00055882277,0.00011376532],"domain_scores_gemma":[0.9995945,0.000024314133,0.0001540651,0.00016219054,2.652633e-7,0.00006462849],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000007982971,0.00008959272,0.00012387492,0.000006108119,0.000050635543,0.0000027822748,0.00011265637,0.000019991478,0.00015219105],"category_scores_gemma":[0.0000025222612,0.00005833517,0.000021602153,0.000060883547,0.00015894364,0.000087600034,0.000058426533,0.000042032745,4.6552815e-9],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007414614,0.000039611834,0.08910208,0.0000148435065,0.000011399956,0.0000011546261,0.00007545714,0.000013820304,0.9059632,0.000109622146,0.00015343806,0.0044412613],"study_design_scores_gemma":[0.00016611202,0.000046549772,0.13389868,0.0000130245435,0.000008365696,0.000001494784,0.00013575162,0.00012839198,0.86128765,0.000026879316,0.0042296983,0.000057429526],"about_ca_topic_score_codex":0.0061643487,"about_ca_topic_score_gemma":0.088445134,"teacher_disagreement_score":0.082280785,"about_ca_system_score_codex":0.000007229386,"about_ca_system_score_gemma":0.00015124728,"threshold_uncertainty_score":0.9318692},"labels":[],"label_agreement":null},{"id":"W2235173415","doi":"","title":"Microorganisms and Metabolic Pathways Involved in Anaerobic Benzene Biodegradation under Nitrate-reducing Conditions","year":2012,"lang":"en","type":"dissertation","venue":"Library and Archives Canada (Government of Canada)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biodegradation; Microorganism; Metabolic pathway; Nitrate; Environmental chemistry; Benzene; Anaerobic exercise; Chemistry; Environmental science; Biology; Bacteria; Biochemistry; Metabolism; Organic chemistry; Physiology","score_opus":0.005168006306137721,"score_gpt":0.15308732589077056,"score_spread":0.14791931958463284,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2235173415","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98031783,0.00061095186,0.00000195981,0.00036830123,0.00022849599,0.00020980214,0.00039296033,0.000006791987,0.017862925],"genre_scores_gemma":[0.9954024,0.0007176188,0.0002697005,0.0004584907,0.000025128567,0.0000046580853,0.00047939885,0.000021482469,0.002621126],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99835294,0.000058567442,0.00033557715,0.00029196308,0.00068324344,0.00027772004],"domain_scores_gemma":[0.99938077,0.000057419737,0.00022827918,0.00012548374,3.4098127e-7,0.00020770199],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000017192378,0.00023597882,0.000268088,0.000036885405,0.0001337168,0.000025540709,0.0001324768,0.00007703198,0.00044054753],"category_scores_gemma":[0.0000021632902,0.00023224523,0.00002034547,0.00013233435,0.00006597386,0.00037270333,0.00006203081,0.00016057015,3.6744268e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007793892,0.000032176074,0.01694795,0.000057555113,0.000024942432,0.000005247671,0.00020850058,0.00001528285,0.97788024,0.0027571856,0.0004647232,0.0015282874],"study_design_scores_gemma":[0.00022573554,0.000013940028,0.48324338,0.000056644276,0.000026015328,0.0000012256498,0.002257461,0.00004791231,0.5125602,0.00026856788,0.0010636296,0.00023532826],"about_ca_topic_score_codex":0.011667202,"about_ca_topic_score_gemma":0.3577384,"teacher_disagreement_score":0.46629542,"about_ca_system_score_codex":0.000018192359,"about_ca_system_score_gemma":0.00041479155,"threshold_uncertainty_score":0.9949142},"labels":[],"label_agreement":null},{"id":"W2240054435","doi":"10.1007/s13762-016-0935-1","title":"Multimedia environmental analysis of PCBs fate and transport mechanism through a case study of transformer oil leakage","year":2016,"lang":"en","type":"article","venue":"International Journal of Environmental Science and Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Environmental science; Groundwater; Environmental remediation; Transformer oil; Oil spill; Hydrogeology; Petroleum; Environmental engineering; Petroleum engineering; Contamination; Transformer; Geotechnical engineering; Geology; Engineering","score_opus":0.006761993807167879,"score_gpt":0.22800212904645484,"score_spread":0.22124013523928696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2240054435","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992593,0.000035008725,0.00011299404,0.0002674147,0.00008453603,0.00007419781,0.000090233014,0.000003944648,0.000072381365],"genre_scores_gemma":[0.99888873,0.00058781815,0.00044514923,0.000033632736,0.000007188036,0.0000011604949,9.833096e-7,0.0000046031964,0.00003073492],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983532,0.000018995323,0.0005064902,0.00025088052,0.0007091025,0.00016136083],"domain_scores_gemma":[0.99940217,0.000030833697,0.00036415318,0.00011288648,0.000012458007,0.00007750078],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037830137,0.00012433543,0.00025966522,0.0003665077,0.00006052506,0.000006291444,0.00035939206,0.00007462675,0.00073232147],"category_scores_gemma":[0.000018215698,0.000083407096,0.000058719426,0.00035491685,0.0015892661,0.00042945225,0.00010617078,0.000084499174,0.0000040782243],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003219947,0.0003801646,0.15469861,8.758342e-7,0.0001430791,0.0001487222,0.0011359716,0.0000031312745,0.80380094,0.000015606513,0.0000012231877,0.039639466],"study_design_scores_gemma":[0.004404854,0.0016289569,0.35961786,0.000036007714,0.00063006964,0.002004114,0.011861587,0.00018651495,0.6184546,0.0003055826,0.0004885415,0.0003813438],"about_ca_topic_score_codex":0.000084890125,"about_ca_topic_score_gemma":0.00011419361,"teacher_disagreement_score":0.20491926,"about_ca_system_score_codex":0.00013548316,"about_ca_system_score_gemma":0.00001238814,"threshold_uncertainty_score":0.8018406},"labels":[],"label_agreement":null},{"id":"W2246012671","doi":"10.2166/wst.2001.0149","title":"Explosive biodegradation in soil slurry batch reactors amended with exogenous microorganisms","year":2001,"lang":"en","type":"article","venue":"Water Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Methanogenesis; Biodegradation; Mineralization (soil science); Environmental chemistry; Trinitrotoluene; Amendment; Slurry; Chemistry; Microorganism; Bioaugmentation; Soil water; Microbial consortium; Waste management; Soil contamination; Biostimulation; Anaerobic digestion; Bioremediation; Pulp and paper industry; Environmental science; Contamination; Methane; Environmental engineering; Bacteria; Nitrogen; Biology; Organic chemistry; Explosive material; Ecology","score_opus":0.007131613011733921,"score_gpt":0.19233445046043868,"score_spread":0.18520283744870475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2246012671","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959584,0.0000057362863,0.00017736755,0.0024542587,0.00010207933,0.00020969105,0.0000023935727,0.00012765489,0.0009624595],"genre_scores_gemma":[0.9984142,0.000032311447,0.0010464179,0.00023728849,0.0000076102874,0.000008943641,0.0000058364417,0.000009076641,0.0002383252],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99832976,0.000017237524,0.00020956501,0.0005466903,0.00030358805,0.0005931848],"domain_scores_gemma":[0.99949366,0.000004878293,0.000064214364,0.00033803695,0.000021593063,0.00007762668],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028926492,0.00015616827,0.0001386176,0.00039481634,0.00020028485,0.00004559133,0.00061268423,0.00013423769,0.00065979414],"category_scores_gemma":[0.00002031272,0.000101839854,0.000015104047,0.0019718108,0.0012537219,0.00041233798,0.00024789583,0.00015617943,0.00070033583],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012320218,0.00006144343,0.065437734,6.820299e-7,9.078718e-7,0.00002483189,0.00078123185,0.000013872275,0.93091625,0.000020754991,0.00004245503,0.0026875054],"study_design_scores_gemma":[0.0002912562,0.00013303098,0.004672708,0.000006126244,0.0000026974385,0.00006654529,0.00053139735,0.000042422624,0.99065167,0.00029650744,0.003117349,0.00018831721],"about_ca_topic_score_codex":0.00019803802,"about_ca_topic_score_gemma":0.0011664872,"teacher_disagreement_score":0.060765024,"about_ca_system_score_codex":0.00032304853,"about_ca_system_score_gemma":0.000036599635,"threshold_uncertainty_score":0.90016335},"labels":[],"label_agreement":null},{"id":"W2250864217","doi":"10.1007/978-90-481-8630-3_59","title":"Impact of Hydrocarbons on Marine Microbial Communities","year":2010,"lang":"en","type":"book-chapter","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Microcosm; Biology; Terminal restriction fragment length polymorphism; Ecosystem; Restriction fragment length polymorphism; Microbial population biology; Marine ecosystem; Microorganism; Metagenomics; Bioremediation; 16S ribosomal RNA; Ecology; Bacteria; Gene; Contamination; Genetics; Polymerase chain reaction","score_opus":0.01272410643169351,"score_gpt":0.22192455338441452,"score_spread":0.20920044695272103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2250864217","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13531561,0.000001536287,0.0000010475591,0.000039746563,0.00013271785,0.00014483859,0.0001227664,0.000025643918,0.8642161],"genre_scores_gemma":[0.5999481,0.00006541677,0.00022112885,0.00020364556,0.000050658346,4.286757e-7,0.00016344133,0.000029538745,0.39931765],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99922496,0.000010909316,0.0002569668,0.0001519288,0.00019615627,0.00015907013],"domain_scores_gemma":[0.99929535,0.00003552467,0.00017955006,0.0004020262,0.0000059296494,0.000081597],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00008235047,0.00025667078,0.0002632095,0.000056790355,0.000050250368,0.000012859759,0.00030575355,0.0003292668,0.10876748],"category_scores_gemma":[0.0000044093636,0.00019122865,0.0002182135,0.00001912119,0.00036040248,0.000031930434,0.00029773466,0.00042494267,0.0018845566],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018511928,0.0002504635,0.013505476,0.000017220367,0.000176724,0.00000848703,0.00038278493,0.000009909442,0.9381338,0.0029384035,0.035971917,0.008419708],"study_design_scores_gemma":[0.0038290694,0.003864091,0.1263021,0.00034802526,0.00032115888,0.00008572429,0.000059821454,0.00008716461,0.1629193,0.011409475,0.6860548,0.004719226],"about_ca_topic_score_codex":0.0021243568,"about_ca_topic_score_gemma":0.00425484,"teacher_disagreement_score":0.7752145,"about_ca_system_score_codex":0.00011015074,"about_ca_system_score_gemma":0.000020954789,"threshold_uncertainty_score":0.9988926},"labels":[],"label_agreement":null},{"id":"W2263095262","doi":"10.51847/zmw1lsw","title":"10.51847/zmw1lSw","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Jaypee Institute of Information Technology","keywords":"Carbazole; Polyvinyl alcohol; Calcium alginate; Biodegradation; Degradation (telecommunications); Chemistry; Matrix (chemical analysis); Dissolution; Pseudomonas; Nuclear chemistry; Chromatography; Chemical engineering; Calcium; Organic chemistry; Bacteria","score_opus":0.004210316475886052,"score_gpt":0.16035634106400362,"score_spread":0.15614602458811758,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2263095262","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04051262,0.0000023859716,1.2786623e-7,0.00030441594,0.0000021093897,0.00009121768,0.000010272691,0.000050507035,0.95902634],"genre_scores_gemma":[0.006110901,2.8735593e-7,0.00011069266,0.00028796194,0.000026964537,0.000001266907,0.0000067279816,0.0000062874487,0.9934489],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999452,0.000015200923,0.00009005358,0.00015330972,0.00012871998,0.00016069201],"domain_scores_gemma":[0.9997347,0.0000071263053,0.000012730975,0.00013127163,0.0000022283796,0.00011195808],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000072732866,0.0000684333,0.000059171365,0.000010907368,0.00004272255,0.000017414248,0.00013801269,0.00003339311,0.99957764],"category_scores_gemma":[0.000008360566,0.000060213522,0.000023570059,0.00014102785,0.00003249663,0.000061306135,0.00003822092,0.000032479817,0.99844766],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019340441,0.000026926939,0.00000851098,4.1254566e-7,0.0000015609468,0.0000014358263,0.000012340624,0.000033584412,0.019201277,7.2571375e-8,0.13182865,0.84886587],"study_design_scores_gemma":[0.00009129156,0.00003650035,0.0014543441,0.0000015804661,0.0000021207807,0.0000016224021,2.3667992e-7,0.000045354896,0.0009714089,4.990331e-7,0.9973012,0.00009381545],"about_ca_topic_score_codex":0.000031628588,"about_ca_topic_score_gemma":7.9458755e-7,"teacher_disagreement_score":0.86547256,"about_ca_system_score_codex":0.00003990805,"about_ca_system_score_gemma":0.0000029345158,"threshold_uncertainty_score":0.24554361},"labels":[],"label_agreement":null},{"id":"W2267648689","doi":"10.1007/s10924-016-0754-y","title":"Investigation of Biosurfactant Activity and Asphaltene Biodegradation by Bacillus cereus","year":2016,"lang":"en","type":"article","venue":"Journal of environmental polymer degradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bacillus cereus; Biodegradation; Asphaltene; Response surface methodology; Bacterial growth; Materials science; Chromatography; Food science; Bacteria; Chemistry; Organic chemistry; Biology","score_opus":0.009249654501468328,"score_gpt":0.1871060288706836,"score_spread":0.17785637436921525,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2267648689","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980134,0.00024938252,0.0004257601,0.00088846893,0.00013290408,0.0001037074,0.000102540325,0.0000054945313,0.00007837677],"genre_scores_gemma":[0.9986488,0.0005746221,0.0003076008,0.00006923071,0.000023956823,5.3487355e-7,0.00001221681,0.000010443891,0.00035256284],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986776,0.00009656879,0.00046444987,0.00018051505,0.00043163143,0.00014920907],"domain_scores_gemma":[0.9989186,0.000055355707,0.0007568369,0.00012004616,0.00000659947,0.00014259608],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00029956314,0.00014960954,0.00018811984,0.000066106935,0.00005527255,0.000013415322,0.00011717686,0.00008869122,0.0009819911],"category_scores_gemma":[0.00002588084,0.00010050361,0.000059667047,0.00011107883,0.00029931328,0.0007238783,0.00005985703,0.000072124385,0.000036915608],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000061710074,0.00004801385,0.06441583,0.000002992082,0.000014897743,6.991574e-7,0.00005179555,4.1851902e-7,0.8853171,0.0000029672026,0.0005752875,0.04950831],"study_design_scores_gemma":[0.00063545123,0.0001792812,0.20416874,0.000018442614,0.000021933447,0.00001752256,0.000026534763,0.000014681338,0.7944433,0.000040974144,0.00032501537,0.00010813927],"about_ca_topic_score_codex":0.000059858536,"about_ca_topic_score_gemma":0.000011180263,"teacher_disagreement_score":0.13975291,"about_ca_system_score_codex":0.00019658344,"about_ca_system_score_gemma":0.000012162653,"threshold_uncertainty_score":0.9999313},"labels":[],"label_agreement":null},{"id":"W2276784535","doi":"10.1038/srep11068","title":"Distribution of petroleum degrading genes and factor analysis of petroleum contaminated soil from the Dagang Oilfield, China","year":2015,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Specialized Research Fund for the Doctoral Program of Higher Education of China; Nanjing University; State Administration of Foreign Experts Affairs; Chinese Academy of Sciences; Western Economic Diversification Canada; National Natural Science Foundation of China","keywords":"Petroleum; Soil water; AlkB; Total petroleum hydrocarbon; Environmental chemistry; Gene; Soil contamination; Contamination; Hydrocarbon; Chemistry; Biology; Environmental science; Soil science; Ecology; Biochemistry; Organic chemistry; Escherichia coli","score_opus":0.01427145535002314,"score_gpt":0.21827668845131104,"score_spread":0.2040052331012879,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2276784535","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983914,0.00011309432,0.0002055546,0.00009731562,0.0007549527,0.00007084198,0.00011685049,0.000011353586,0.000238619],"genre_scores_gemma":[0.99928737,0.0000091167985,0.000039230385,0.000009150202,0.000011030076,8.841571e-7,0.00028102729,0.0000033166891,0.00035885902],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985413,0.00006262495,0.00041488922,0.00036582284,0.00046046588,0.00015487458],"domain_scores_gemma":[0.9990096,0.000038615173,0.00043049542,0.00038559007,0.00003642109,0.000099240475],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00079967006,0.00009896596,0.00021984559,0.00005213356,0.000108982356,0.00005985907,0.00013362776,0.000054915297,0.00034049174],"category_scores_gemma":[0.00015429412,0.00006584367,0.000086537875,0.00058068894,0.0003654366,0.00012222078,0.00011390139,0.00005558059,0.0000057388206],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008043266,0.000032676915,0.6014236,0.0000021011272,0.00005926418,0.000007353982,0.00048398913,0.00024671,0.3948842,0.0000025037443,0.0016247313,0.0012247739],"study_design_scores_gemma":[0.00014720699,0.000022807713,0.777398,0.000009114903,0.00018082611,0.0000054196457,0.00030438582,0.0027246645,0.21661112,0.00008799614,0.0023995598,0.00010893308],"about_ca_topic_score_codex":0.0014737501,"about_ca_topic_score_gemma":0.0010043657,"teacher_disagreement_score":0.1782731,"about_ca_system_score_codex":0.000057875677,"about_ca_system_score_gemma":0.000026523321,"threshold_uncertainty_score":0.3728146},"labels":[],"label_agreement":null},{"id":"W2280416398","doi":"10.1128/aem.02017-15","title":"Dehalogenimonas sp. Strain WBC-2 Genome and Identification of Its <i>trans</i> -Dichloroethene Reductive Dehalogenase, TdrA","year":2015,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Dehalogenase; Dehalococcoides; Operon; Corrinoid; Genome; Biology; Biochemistry; Chemistry; Genetics; Gene; Escherichia coli; Vinyl chloride","score_opus":0.009879822336764791,"score_gpt":0.18867080901436392,"score_spread":0.17879098667759913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2280416398","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977285,0.00045374222,0.00007211485,0.00012549551,0.000068420944,0.0003387674,0.00069676357,0.00001555505,0.00050061085],"genre_scores_gemma":[0.99845934,0.00049832574,0.00028014043,0.00022269656,0.000024147248,0.000008652914,0.00039333626,0.000014531167,0.000098844765],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988164,0.000049197464,0.00034842573,0.00045123923,0.00007628195,0.0002584551],"domain_scores_gemma":[0.9995134,0.000019853213,0.00015691215,0.00015315786,0.0000028754184,0.00015379667],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002540509,0.00019853745,0.00022500781,0.00003479534,0.00007374018,0.000010505382,0.00013356362,0.000158916,0.00029934297],"category_scores_gemma":[0.000005832424,0.00018264433,0.000030361785,0.00007354213,0.00075947196,0.0000768373,0.00016270627,0.00009736876,0.00012474609],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051619485,0.00008392064,0.0037828484,0.000007532292,0.000019244597,0.0000014745339,0.0007155511,0.000016606149,0.9936523,0.00004536364,0.00009403723,0.0015294905],"study_design_scores_gemma":[0.0013095213,0.00017211334,0.08539916,0.0000038986586,0.000051638053,0.00010312654,0.0011117648,0.000014208852,0.9024542,0.00034144238,0.0086432425,0.0003957115],"about_ca_topic_score_codex":0.000022719269,"about_ca_topic_score_gemma":0.000021107937,"teacher_disagreement_score":0.09119814,"about_ca_system_score_codex":0.00008912163,"about_ca_system_score_gemma":0.000007844922,"threshold_uncertainty_score":0.74480194},"labels":[],"label_agreement":null},{"id":"W2283595540","doi":"10.3389/fmicb.2016.00100","title":"Sister Dehalobacter Genomes Reveal Specialization in Organohalide Respiration and Recent Strain Differentiation Likely Driven by Chlorinated Substrates","year":2016,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Strategic Environmental Research and Development Program; Ontario Genomics Institute; Government of Canada; Joint Genome Institute; Government of Ontario; National Institute of Environmental Health Sciences; Ontario Genomics; Genome Canada; U.S. Department of Energy; U.S. Department of Defense","keywords":"Dehalogenase; Genome; Biology; Strain (injury); Corrinoid; Gene; Genetics","score_opus":0.007903044524390085,"score_gpt":0.19623318586912014,"score_spread":0.18833014134473006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2283595540","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99766797,0.000092030125,0.000592042,0.0007802572,0.0003660925,0.0002636108,0.000118734184,0.000015054679,0.000104237384],"genre_scores_gemma":[0.99772763,0.000652447,0.000673525,0.00026158648,0.000030646563,0.0000049495407,0.0002998453,0.000010822809,0.00033853756],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99882036,0.00016494194,0.00034572242,0.0003634822,0.0000469582,0.00025855898],"domain_scores_gemma":[0.9997001,0.000017945558,0.00012478746,0.00010203955,0.000011867918,0.00004325864],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001889825,0.00014334924,0.00018063391,0.0000923601,0.00003364708,0.000020666086,0.000109308494,0.00018253233,0.0007494703],"category_scores_gemma":[0.00003553406,0.00010973531,0.000017023642,0.00020697896,0.00014104442,0.00016995806,0.00005372284,0.00006992915,0.00004555468],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003317973,0.000024774574,0.4249747,0.0000018734879,0.0000027174785,9.1374847e-7,0.00009660045,0.0000011222712,0.56555367,0.000002503032,0.003507077,0.0058008577],"study_design_scores_gemma":[0.0013473299,0.000075549506,0.79745525,0.000025262778,0.000006283018,0.000004136106,0.000042780826,0.000021592823,0.1786104,0.00015328046,0.021995818,0.00026228023],"about_ca_topic_score_codex":0.00003102304,"about_ca_topic_score_gemma":0.00078160473,"teacher_disagreement_score":0.38694328,"about_ca_system_score_codex":0.0003372314,"about_ca_system_score_gemma":0.00001049064,"threshold_uncertainty_score":0.82061744},"labels":[],"label_agreement":null},{"id":"W2285495942","doi":"10.1016/j.watres.2016.01.034","title":"Microbial interactions with naturally occurring hydrophobic sediments: Influence on sediment and associated contaminant mobility","year":2016,"lang":"en","type":"article","venue":"Water Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Environment and Climate Change Canada","funders":"","keywords":"Sediment; Environmental chemistry; Extracellular polymeric substance; Microbial population biology; Settling; Consolidation (business); Contamination; Erosion; Oil sands; Environmental science; Biofilm; Chemistry; Environmental engineering; Asphalt; Geology; Ecology; Bacteria; Geomorphology; Materials science; Biology","score_opus":0.02012610547627684,"score_gpt":0.2882323404571909,"score_spread":0.26810623498091407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2285495942","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980887,0.0000029809403,0.0000028210477,0.00092038175,0.000077395416,0.00036706816,0.00002787008,0.000026669843,0.00048608906],"genre_scores_gemma":[0.9982543,0.000009621164,0.000033293578,0.00027044382,0.000015721054,0.000012928704,0.0000067368646,0.000009445308,0.0013875278],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982385,0.00018427767,0.00017991033,0.0004128385,0.00049090496,0.000493575],"domain_scores_gemma":[0.99951696,0.000054004326,0.000034780853,0.00020635538,0.00004701802,0.00014088186],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0007737424,0.00012968214,0.00011397908,0.00006411266,0.00022290836,0.000060480947,0.00018607145,0.00005830539,0.0012760278],"category_scores_gemma":[0.00005638639,0.00006207334,0.00002108863,0.00014450938,0.0003579517,0.00024414717,0.00027964386,0.00024220836,0.0010862035],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012627467,0.00013759371,0.04184162,0.0000035833716,0.000012325033,0.00000981512,0.00033335717,0.000005248905,0.95592725,0.0000017726836,0.00085242355,0.00074874447],"study_design_scores_gemma":[0.0012020534,0.00041847216,0.13261794,0.00012791944,0.0000051497677,0.000008070246,0.00005310548,0.00002664695,0.85434806,0.000025254714,0.010965794,0.00020151665],"about_ca_topic_score_codex":0.00047437116,"about_ca_topic_score_gemma":0.0004559765,"teacher_disagreement_score":0.10157917,"about_ca_system_score_codex":0.00051194703,"about_ca_system_score_gemma":0.000014212763,"threshold_uncertainty_score":0.99969155},"labels":[],"label_agreement":null},{"id":"W2287037894","doi":"10.1021/acs.est.5b03879","title":"Microbially Enhanced Oil Recovery by Sequential Injection of Light Hydrocarbon and Nitrate in Low- And High-Pressure Bioreactors","year":2015,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Enbridge; Natural Sciences and Engineering Research Council of Canada; Computer Modelling Group; ConocoPhillips; Shell; Dow Chemical Company; BP; Baker Hughes","keywords":"Nitrate; Toluene; Chemistry; Bioreactor; Residual oil; Hydrocarbon; Enhanced oil recovery; Light crude oil; Water injection (oil production); Aqueous solution; Environmental chemistry; Petroleum engineering; Organic chemistry; Geology","score_opus":0.0035559991826219686,"score_gpt":0.18179896284535965,"score_spread":0.17824296366273767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2287037894","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987822,0.0001153744,0.00001728874,0.00027892212,0.0001372572,0.000109018685,0.00002617979,0.000029292367,0.00050444255],"genre_scores_gemma":[0.99936515,0.0002007586,0.00020033213,0.000062580475,0.0000072485664,0.0000035303349,0.0000068491504,0.000007664796,0.00014588036],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99863553,0.000030262621,0.00025555925,0.00050677493,0.0002592011,0.00031265186],"domain_scores_gemma":[0.9995519,0.0000073750653,0.00014224148,0.00017697539,0.0000025867753,0.00011893852],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002998493,0.0001574227,0.00017444187,0.0002104623,0.00007192614,0.00002136866,0.0002492843,0.00018873576,0.00011983219],"category_scores_gemma":[0.00003309593,0.00014584088,0.000014817337,0.0005959666,0.001769936,0.00034908083,0.00037705465,0.00015025937,0.000032124757],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026561936,0.00007534369,0.02596929,0.0000035629882,0.000002509505,0.000001476575,0.00014752225,0.00002902066,0.969198,0.0000055461446,0.000065217624,0.004475973],"study_design_scores_gemma":[0.00052764267,0.00022130403,0.0096756285,0.000016142936,0.000007371025,0.000017192044,0.00025042612,0.000055354474,0.988402,0.00016009432,0.0004884911,0.00017835117],"about_ca_topic_score_codex":0.00035175405,"about_ca_topic_score_gemma":0.00018413065,"teacher_disagreement_score":0.019204026,"about_ca_system_score_codex":0.00022199903,"about_ca_system_score_gemma":0.000020713092,"threshold_uncertainty_score":0.65214026},"labels":[],"label_agreement":null},{"id":"W2287382567","doi":"10.1080/09593330.2015.1102333","title":"Halotolerance and effect of salt on hydrophobicity in hydrocarbon-degrading bacteria","year":2015,"lang":"en","type":"article","venue":"Environmental Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Halotolerance; Hydrocarbon; Bioremediation; Biodegradation; Bacteria; Environmental chemistry; Microorganism; Chemistry; Salt (chemistry); Contamination; Salinity; Flocculation; Microbiology; Biology; Ecology; Organic chemistry","score_opus":0.005030491290903082,"score_gpt":0.19686391244290583,"score_spread":0.19183342115200275,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2287382567","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99864274,0.00004616737,0.0000023210555,0.00014675641,0.000069974434,0.00021597343,0.000007756147,0.00003135599,0.0008369746],"genre_scores_gemma":[0.9996635,0.0000395678,0.00016430553,0.00006279287,0.0000061333267,0.0000064465953,0.000004429578,0.000009921915,0.000042916654],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991338,0.00004155327,0.00019182776,0.00028858182,0.000145088,0.00019911276],"domain_scores_gemma":[0.9996529,0.000020491621,0.00007881004,0.00018033096,3.2738882e-7,0.00006712305],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019385281,0.00014296522,0.00020676375,0.00008624132,0.000021179936,0.000003761389,0.00014694629,0.00014850612,0.00020056305],"category_scores_gemma":[0.000021587077,0.00012351267,0.000020268864,0.0001659149,0.00039092335,0.000058831745,0.00016574515,0.00014432453,0.0001966642],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004395353,0.000042938762,0.4099717,0.0000021634696,0.0000017425727,0.0000053199647,0.000044510394,0.000012366848,0.58779854,0.0000075997723,0.0000366933,0.0020324679],"study_design_scores_gemma":[0.0012392988,0.00069142366,0.14354917,0.000017578543,0.000004534745,0.00001487951,0.000032742308,0.00020889443,0.8529392,0.0001970375,0.00093309354,0.00017214881],"about_ca_topic_score_codex":0.00004785988,"about_ca_topic_score_gemma":0.000028267354,"teacher_disagreement_score":0.26642254,"about_ca_system_score_codex":0.0001849897,"about_ca_system_score_gemma":0.0000021280703,"threshold_uncertainty_score":0.50367004},"labels":[],"label_agreement":null},{"id":"W2288735998","doi":"10.1016/j.watres.2016.01.057","title":"Use of dual carbon–chlorine isotope analysis to assess the degradation pathways of 1,1,1-trichloroethane in groundwater","year":2016,"lang":"en","type":"article","venue":"Water Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Toronto; Direction Générale Opérationnelle Agriculture, Ressources Naturelles et Environnement du Service Public de Wallonie; European Commission","keywords":"Environmental chemistry; Chemistry; Isotope analysis; Groundwater; Trichloroethylene; Chlorine; Aquifer; Isotopes of carbon; Degradation (telecommunications); Reductive dechlorination; Stable isotope ratio; Isotopes of chlorine; Total organic carbon; Biodegradation; Geology; Organic chemistry","score_opus":0.1526537454922612,"score_gpt":0.3210267661070512,"score_spread":0.16837302061479,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2288735998","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982939,0.0000020028533,0.000039156963,0.0011259872,0.00002884986,0.0002700557,0.000016562048,0.000004379971,0.00021913552],"genre_scores_gemma":[0.998382,0.000020055195,0.00009360548,0.000030165858,0.000011932684,0.000009941591,0.000009836513,0.000005765802,0.0014367234],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982352,0.00026613913,0.00029341417,0.0002272906,0.0006484115,0.00032949034],"domain_scores_gemma":[0.99942994,0.0000844489,0.00003674717,0.00031350355,0.000054160642,0.00008119585],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0015626671,0.00007555823,0.00015540994,0.00024844846,0.000031700336,0.000021258116,0.00024430058,0.000048337904,0.0013572421],"category_scores_gemma":[0.00014419474,0.000032508862,0.000047030473,0.0010305966,0.0001690368,0.00014756144,0.0003231199,0.00008629291,0.00011996647],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005699622,0.000060595772,0.20577139,0.000002823948,0.000018630553,0.000002364412,0.00034324083,0.000023610657,0.7924646,0.000009393587,0.000091712,0.0011546476],"study_design_scores_gemma":[0.00016343559,0.00007686208,0.18572085,0.0000058773016,0.000009711145,3.5847773e-7,0.000037769732,0.000056711586,0.81290746,0.000028947226,0.0009374137,0.00005458592],"about_ca_topic_score_codex":0.004454915,"about_ca_topic_score_gemma":0.0028010828,"teacher_disagreement_score":0.020442884,"about_ca_system_score_codex":0.00011423355,"about_ca_system_score_gemma":0.000011519385,"threshold_uncertainty_score":0.99955565},"labels":[],"label_agreement":null},{"id":"W2291919805","doi":"10.6000/1927-3037.2015.04.04.3","title":"The Effect of Bacteria on Seed Germination in Sorghum and Rape Under Cadmium and Petroleum Conditions","year":2016,"lang":"en","type":"article","venue":"International Journal of Biotechnology for Wellness Industries","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Germination; Sorghum; Cadmium; Bacteria; Chemistry; Food science; Botany; Agronomy; Biology","score_opus":0.006185039769217019,"score_gpt":0.24195870360920751,"score_spread":0.2357736638399905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2291919805","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98537004,0.000021566952,0.00010070431,0.014003363,0.0003378239,0.00009277316,0.00004060202,0.000004462728,0.00002866989],"genre_scores_gemma":[0.99968314,0.00013271761,0.000007750815,0.000040365252,0.000025167274,0.0000025501693,0.0000020040054,0.0000037430098,0.0001025653],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99938846,0.00003971581,0.00025475642,0.00008990572,0.0001368896,0.00009024868],"domain_scores_gemma":[0.9993041,0.00034148435,0.00026438772,0.000052956315,0.000014303875,0.000022735065],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003677051,0.000073459065,0.00011398963,0.00011927694,0.000054184038,0.000016808443,0.00017380346,0.00017882664,0.000052103947],"category_scores_gemma":[0.00024269779,0.000040034505,0.0000234728,0.0000659723,0.0005159666,0.00011402591,0.000058277088,0.00011649478,0.000002515133],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00060567906,0.00004081676,0.08214117,0.000004503816,0.00006264945,0.0000052352298,0.00005529851,0.0000100155885,0.76302356,0.00204978,0.0005938995,0.15140739],"study_design_scores_gemma":[0.0011533968,0.00036267418,0.09823254,0.000044570075,0.000008407222,0.000038960763,0.00007278214,0.000011107328,0.8957103,0.0007227935,0.0035898983,0.000052566655],"about_ca_topic_score_codex":0.000007910868,"about_ca_topic_score_gemma":0.00004163396,"teacher_disagreement_score":0.15135483,"about_ca_system_score_codex":0.00007376312,"about_ca_system_score_gemma":0.000014408178,"threshold_uncertainty_score":0.19011006},"labels":[],"label_agreement":null},{"id":"W2292844128","doi":"","title":"Characterization of Hydrolytic Dehalogenases: Substrate Specificity and Isotope Fractionation","year":2013,"lang":"en","type":"dissertation","venue":"Library and Archives Canada (Government of Canada)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Fractionation; Characterization (materials science); Substrate specificity; Chemistry; Hydrolysis; Substrate (aquarium); Biochemistry; Chromatography; Biology; Materials science; Enzyme; Nanotechnology; Ecology","score_opus":0.0027862518252406232,"score_gpt":0.13603245904218353,"score_spread":0.1332462072169429,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2292844128","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9554865,0.000028720659,0.0000047078925,0.00020472278,0.00016750033,0.00022198792,0.0002554905,0.0000037221628,0.043626692],"genre_scores_gemma":[0.9882885,0.00038666782,0.00008680851,0.00017533226,0.00002259969,0.0000034105167,0.00032228418,0.000012562697,0.010701802],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99844456,0.000034108412,0.0003140901,0.00022526499,0.00084668864,0.00013526829],"domain_scores_gemma":[0.99935275,0.00004945164,0.0003807159,0.000098749726,5.837697e-7,0.00011773966],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000093840545,0.0001631356,0.00019963017,0.000017954804,0.00007751245,0.00001671981,0.00010300593,0.000057150628,0.00065683306],"category_scores_gemma":[0.0000027277133,0.00015676861,0.000017426682,0.000054767082,0.00005513021,0.00033123096,0.000036542886,0.00009249082,3.0772455e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011432831,0.000019107156,0.019681003,0.00010139878,0.0000175696,0.0000027255226,0.00007647011,0.0000051357506,0.976437,0.00047669085,0.00013076665,0.0029378582],"study_design_scores_gemma":[0.00010295264,0.000020916363,0.4614125,0.000039774284,0.0000127998255,9.2010816e-7,0.00033561437,0.0002932734,0.5357677,0.000074308824,0.0018102276,0.00012902882],"about_ca_topic_score_codex":0.0035079317,"about_ca_topic_score_gemma":0.043780297,"teacher_disagreement_score":0.44173148,"about_ca_system_score_codex":0.000010180093,"about_ca_system_score_gemma":0.00023855847,"threshold_uncertainty_score":0.9736682},"labels":[],"label_agreement":null},{"id":"W2293562983","doi":"10.1016/j.jhazmat.2015.12.039","title":"Nitrate-Mediated Microbially Enhanced Oil Recovery (N-MEOR) from model upflow bioreactors","year":2016,"lang":"en","type":"article","venue":"Journal of Hazardous Materials","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Bioreactor; Nitrate; Chemistry; Residual oil; Microbial enhanced oil recovery; Fermentation; Enhanced oil recovery; Pulp and paper industry; Chromatography; Food science; Waste management; Microorganism; Bacteria; Organic chemistry; Biology","score_opus":0.007116958273578908,"score_gpt":0.19321684671284942,"score_spread":0.1860998884392705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2293562983","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959906,0.000018135564,0.0005055468,0.00063649047,0.0014111245,0.00006860149,0.0005539653,0.000028504299,0.00078705174],"genre_scores_gemma":[0.99552643,0.0004118125,0.0023496652,0.0005305216,0.00027488917,0.0000010640919,0.00001903831,0.000029203307,0.0008573825],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979289,0.00013426213,0.00092685525,0.00026162673,0.00039319549,0.00035516932],"domain_scores_gemma":[0.99854314,0.00010205892,0.00086068735,0.00022654077,0.00005967081,0.00020792824],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00057132187,0.00024941127,0.00046403435,0.000077605575,0.00006156872,0.000097862,0.00041278458,0.00019041507,0.009704002],"category_scores_gemma":[0.00020376097,0.00015219982,0.00014393215,0.000115741415,0.00013148488,0.00048754126,0.00008008727,0.000088977475,0.0015346534],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003836734,0.00008455788,0.00023781612,0.000004175889,0.000038529248,0.000018656385,0.00010472971,0.000042224037,0.9866888,9.241504e-7,0.008697682,0.0036982687],"study_design_scores_gemma":[0.0011521677,0.00011552789,0.0013043232,0.0000882845,0.00003188398,0.000016953161,0.000015627915,0.0000064970122,0.99485564,0.00019815388,0.0019641297,0.00025081018],"about_ca_topic_score_codex":0.0000880673,"about_ca_topic_score_gemma":0.00006880754,"teacher_disagreement_score":0.008169348,"about_ca_system_score_codex":0.00025121673,"about_ca_system_score_gemma":0.0000943946,"threshold_uncertainty_score":0.9992428},"labels":[],"label_agreement":null},{"id":"W2294836852","doi":"10.2166/wst.2005.0504","title":"Molecular analysis of Desulfitobacterium frappieri  pcp-1 involved in reductive dehalogenation of pentachlorophenol","year":2005,"lang":"en","type":"article","venue":"Water Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Reductive dechlorination; Bioremediation; Pentachlorophenol; Halogenation; Clostridia; Bacteria; Chemistry; Dehalococcoides; Dehalogenase; Bioaugmentation; Firmicutes; Anaerobic bacteria; Geobacter; Environmental chemistry; Microbiology; Biochemistry; Biology; Organic chemistry; Biodegradation; Gene; 16S ribosomal RNA","score_opus":0.006346921030319756,"score_gpt":0.2178555732174672,"score_spread":0.21150865218714746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2294836852","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99859816,0.000010361677,0.0002721451,0.00060584064,0.000045020442,0.00013635294,0.0000068455993,0.000021394075,0.0003038635],"genre_scores_gemma":[0.9982015,0.000008293031,0.0017078487,0.000054986143,0.0000028232282,0.000004039474,0.0000068148993,0.0000033248089,0.000010380948],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99873745,0.000020604888,0.00033445613,0.0003457135,0.0002811972,0.00028058578],"domain_scores_gemma":[0.99950016,0.0000042801516,0.00012527885,0.00029278893,0.00003952727,0.000037997837],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037416597,0.00009415618,0.00021046906,0.0010414975,0.00003802168,0.0000073378887,0.000533554,0.00010470264,0.00034339735],"category_scores_gemma":[0.000039726492,0.000072277515,0.000047761314,0.003913122,0.0013206349,0.00023105797,0.00025418366,0.000077557626,0.0000390547],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000871206,0.00007081155,0.06242251,0.0000011702768,0.000010621192,0.0000010600362,0.0005093671,0.0009186031,0.93403447,0.000056308676,0.0000030257695,0.0019633523],"study_design_scores_gemma":[0.0001415976,0.000046410187,0.048086446,0.0000026867356,0.000022956596,7.4288243e-7,0.0001885773,0.0008578168,0.95033056,0.00012665484,0.00011291046,0.00008262671],"about_ca_topic_score_codex":0.00013174495,"about_ca_topic_score_gemma":0.00035545797,"teacher_disagreement_score":0.016296115,"about_ca_system_score_codex":0.00018663856,"about_ca_system_score_gemma":0.000019540683,"threshold_uncertainty_score":0.48659343},"labels":[],"label_agreement":null},{"id":"W2295319879","doi":"10.3390/agronomy6010019","title":"Root Exudation: The Ecological Driver of Hydrocarbon Rhizoremediation","year":2016,"lang":"en","type":"article","venue":"Agronomy","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":177,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Espace pour la vie","funders":"Natural Sciences and Engineering Research Council of Canada; Génome Québec; Genome Canada","keywords":"Rhizosphere; Bioremediation; Microbiome; Biodegradation; Phytoremediation; Nutrient; Environmental chemistry; Polycyclic aromatic hydrocarbon; Bacteria; Chemistry; Soil water; Biology; Contamination; Ecology; Bioinformatics","score_opus":0.007573925106578063,"score_gpt":0.19187036349071027,"score_spread":0.1842964383841322,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2295319879","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899999,0.000005715792,0.00018257258,0.0017654255,0.00009120419,0.00013025083,0.0000030734257,0.000013375971,0.007808477],"genre_scores_gemma":[0.99916595,0.000009261101,0.00012356714,0.0001360053,0.00003943445,0.0000039723427,0.0000038775743,0.0000025456886,0.00051539013],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99946225,0.00003750138,0.00014311654,0.00012663548,0.00012536092,0.00010516117],"domain_scores_gemma":[0.9996811,0.00006443476,0.00008822746,0.0001275568,0.000005682928,0.000032959542],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00015602545,0.000057105044,0.00005857329,0.000008805311,0.000040323204,0.000005317335,0.00014016844,0.000042832176,0.006516774],"category_scores_gemma":[0.000032299875,0.000026615011,0.000030623527,0.00007791887,0.0001442009,0.00010624615,0.00006511666,0.000025637608,0.00090536475],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014994604,0.00007231267,0.669612,0.0000013566176,0.000008940102,5.6549453e-7,0.00019934165,0.000012004698,0.28896984,0.0003705361,0.0148094315,0.025928665],"study_design_scores_gemma":[0.0002473791,0.000032088905,0.93142223,0.000003250212,0.0000054551615,5.8181996e-7,0.000011951385,0.000016621263,0.04627622,0.0002649584,0.021652188,0.00006708245],"about_ca_topic_score_codex":0.000023498602,"about_ca_topic_score_gemma":0.0000952769,"teacher_disagreement_score":0.2618102,"about_ca_system_score_codex":0.000058214555,"about_ca_system_score_gemma":0.0000067434553,"threshold_uncertainty_score":0.99987257},"labels":[],"label_agreement":null},{"id":"W2296094090","doi":"10.2166/wqrjc.2016.025","title":"Biosurfactant produced by a Rhodococcus erythropolis mutant as an oil spill response agent","year":2016,"lang":"en","type":"article","venue":"Water Quality Research Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"National Natural Science Foundation of China","keywords":"Dispersant; Chemistry; Strain (injury); Biodegradation; Critical micelle concentration; Rhodococcus; Petroleum; Food science; Micelle; Dispersion (optics); Aqueous solution; Organic chemistry; Biology","score_opus":0.08421653579683999,"score_gpt":0.388254476241608,"score_spread":0.30403794044476806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2296094090","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9790138,0.000022447228,0.000014449635,0.019800607,0.0002520724,0.00018967548,0.00010333627,0.000043623455,0.0005600103],"genre_scores_gemma":[0.99328786,0.00032031196,0.00012285302,0.0003495516,0.00015532007,0.000005890672,0.0000081730195,0.000028338523,0.005721681],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9914407,0.0039676107,0.00073171465,0.0006440715,0.0019077385,0.001308148],"domain_scores_gemma":[0.9979674,0.00018698546,0.00014271542,0.00060742535,0.00014770303,0.0009477329],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.015958197,0.00025075232,0.0002725544,0.0001365268,0.00067356636,0.00031033895,0.00075583096,0.00015012678,0.020940809],"category_scores_gemma":[0.0010322855,0.00012501764,0.00014605591,0.00029897495,0.000825121,0.00054995675,0.00041030746,0.00053410186,0.007819286],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014778185,0.0002499917,0.004883243,0.0000062880813,0.00002144317,0.00007531177,0.001081652,3.888988e-7,0.9722252,0.000010326869,0.010661473,0.009306864],"study_design_scores_gemma":[0.0010505413,0.0005733035,0.0057465443,0.00003476392,0.0000046067066,0.00009859487,0.00027789467,0.000002491624,0.8998014,0.00044819101,0.09166036,0.0003013113],"about_ca_topic_score_codex":0.0009602757,"about_ca_topic_score_gemma":0.00011820993,"teacher_disagreement_score":0.08099888,"about_ca_system_score_codex":0.000915489,"about_ca_system_score_gemma":0.00012352722,"threshold_uncertainty_score":0.99295324},"labels":[],"label_agreement":null},{"id":"W2302418272","doi":"10.3389/fpls.2016.00303","title":"Potential Biotechnological Strategies for the Cleanup of Heavy Metals and Metalloids","year":2016,"lang":"en","type":"review","venue":"Frontiers in Plant Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":445,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Science and Engineering Research Board; University of Sharjah","keywords":"Metalloid; Heavy metals; Environmental science; Environmental chemistry; Chemistry; Metal","score_opus":0.02145470076411435,"score_gpt":0.26337931607223025,"score_spread":0.2419246153081159,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2302418272","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00035187084,0.98932254,0.0069948793,0.0001228464,0.0011001392,0.0011718858,0.00060992286,0.000025091345,0.00030081565],"genre_scores_gemma":[0.0023019263,0.9937864,0.0037368136,0.000024818017,0.000017823415,0.00001554842,0.0000072479816,0.000006282394,0.00010317511],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99841833,0.00004420132,0.00039916424,0.00047084785,0.00033639462,0.0003310888],"domain_scores_gemma":[0.99934024,0.00008987511,0.00025433925,0.0002490445,0.000007582162,0.00005891067],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011158655,0.00020692458,0.0006114868,0.00013968404,0.00013457768,0.000064313215,0.0009087936,0.00019168099,0.00008687118],"category_scores_gemma":[0.00009848555,0.00009771597,0.00012458483,0.0005306361,0.002327718,0.00021772801,0.00029315052,0.00014293744,0.000013478568],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002107999,0.000037556685,0.000056931294,0.0004011575,0.0000314129,0.0000039177858,0.000034976514,0.0000045184634,0.0029368082,0.00051148125,0.0065467,0.98941344],"study_design_scores_gemma":[0.00018848483,0.0000875017,0.00011817011,0.00067617587,0.00012545106,0.000027438156,0.00015865652,0.0002208044,0.0007442218,0.0007134833,0.9966277,0.0003119001],"about_ca_topic_score_codex":0.00001796869,"about_ca_topic_score_gemma":0.000009079909,"teacher_disagreement_score":0.990081,"about_ca_system_score_codex":0.0000913449,"about_ca_system_score_gemma":0.000097308715,"threshold_uncertainty_score":0.85765743},"labels":[],"label_agreement":null},{"id":"W2303343820","doi":"10.1128/aem.03306-15","title":"Use of Substrate-Induced Gene Expression in Metagenomic Analysis of an Aromatic Hydrocarbon-Contaminated Soil","year":2015,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Metagenomics; Biology; Contig; Computational biology; Context (archaeology); Gene; Genetics; Shotgun sequencing; Genomic library; Gene prediction; DNA sequencing; Genome; Peptide sequence","score_opus":0.019366906719915318,"score_gpt":0.20000484225068982,"score_spread":0.1806379355307745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2303343820","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995946,0.000022575605,0.000008782715,0.0000055902156,0.000024641364,0.00016980105,0.00007829364,0.0000063485754,0.00008932762],"genre_scores_gemma":[0.9989348,0.000030042836,0.00060453935,0.00005219914,0.0000031062257,0.0000035811815,0.0003489858,0.000008368991,0.000014383668],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998955,0.00007719276,0.00039535706,0.00032044956,0.0000621426,0.00018983599],"domain_scores_gemma":[0.9994794,0.000026798061,0.00019685287,0.00020035903,8.5835165e-7,0.00009569652],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001912026,0.00015471957,0.00038406882,0.00011767944,0.000018146951,0.0000049540076,0.00012256943,0.00014030225,0.00018794624],"category_scores_gemma":[0.0000040411423,0.0001339387,0.000045836452,0.00021154234,0.00023239972,0.00008542363,0.00011892072,0.00006834993,0.000020718617],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052500087,0.00016883283,0.0452548,0.000002415858,0.00005254628,0.0000018763008,0.00040235498,0.00058746623,0.9530649,9.978569e-7,0.0000066286834,0.00040468565],"study_design_scores_gemma":[0.0005179318,0.00008404027,0.16259159,0.000002256939,0.00009628086,0.0000035097567,0.00023442211,0.00043987768,0.8358596,0.000013262771,0.000027278698,0.00012997974],"about_ca_topic_score_codex":0.0003297964,"about_ca_topic_score_gemma":0.00030230725,"teacher_disagreement_score":0.11733679,"about_ca_system_score_codex":0.00008014287,"about_ca_system_score_gemma":0.0000058343135,"threshold_uncertainty_score":0.54618615},"labels":[],"label_agreement":null},{"id":"W2313475472","doi":"10.1007/s002530000584","title":"Biotransformations catalyzed by cloned p -cymene monooxygenase from Pseudomonas putida F1","year":2001,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Biotechnology Research Institute","funders":"","keywords":"Pseudomonas putida; Biotransformation; Chemistry; Monooxygenase; Hydroxylation; Styrene; Biocatalysis; Toluene; Substituent; Styrene oxide; Biphenyl; Ethylbenzene; Benzene; Stereochemistry; Catalysis; Organic chemistry; Enzyme; Cytochrome P450; Reaction mechanism","score_opus":0.004391220297392593,"score_gpt":0.18025935243035643,"score_spread":0.17586813213296384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2313475472","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9925885,0.00020107739,0.00073970354,0.0042245355,0.000113001115,0.00034144826,0.0003971864,0.00019073009,0.0012037741],"genre_scores_gemma":[0.9955991,0.0009689747,0.0011847542,0.0011766254,0.000019895851,0.0000137497445,0.0008733829,0.000012743284,0.00015081251],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99863404,0.000031133488,0.00032600094,0.00053383055,0.0000412066,0.00043375825],"domain_scores_gemma":[0.9994666,0.000038408718,0.00010933273,0.0002890833,0.00000535892,0.000091193026],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00011940257,0.00024753725,0.00026628017,0.000072340044,0.0002158309,0.000015684162,0.00028187537,0.0007929265,0.0018672006],"category_scores_gemma":[0.000008592239,0.00021226122,0.00004194612,0.00030744524,0.000790239,0.00006733324,0.0001863467,0.00026272066,0.0012305616],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000063614614,0.000080829785,0.000998096,0.000001636041,0.000026584064,0.000004285199,0.00006952721,7.808248e-7,0.9843142,0.00022094873,0.0073702154,0.0068493085],"study_design_scores_gemma":[0.0008538715,0.000038902526,0.00053889473,0.00000202826,0.000019459232,0.000053025018,0.00006871668,0.000008786122,0.86944497,0.00031676836,0.12839162,0.0002629339],"about_ca_topic_score_codex":0.00035926068,"about_ca_topic_score_gemma":0.00034928726,"teacher_disagreement_score":0.121021405,"about_ca_system_score_codex":0.000057621077,"about_ca_system_score_gemma":0.000009440716,"threshold_uncertainty_score":0.9995471},"labels":[],"label_agreement":null},{"id":"W2314484188","doi":"10.1139/w11-093","title":"Polycyclic aromatic hydrocarbon degrading gene islands in five pyrene-degrading<i>Mycobacterium</i>isolates from different geographic locations","year":2012,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Gene; Biology; Pyrene; Plasmid; Genome; Genetics; Mycobacterium; Synteny; Horizontal gene transfer; Microbiology; Bacteria","score_opus":0.007933091024519542,"score_gpt":0.19007636991028223,"score_spread":0.1821432788857627,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2314484188","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99759716,0.00093790557,0.000023190474,0.0003203207,0.0007977141,0.000102242295,0.0000589961,0.000006554272,0.00015594637],"genre_scores_gemma":[0.99897265,0.000106736305,0.00023990848,0.00041020624,0.00014025596,0.0000014682746,0.00006989644,0.000015729078,0.000043159962],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984972,0.000120704084,0.000537464,0.00018157123,0.000050690698,0.00061239785],"domain_scores_gemma":[0.9989188,0.000078032965,0.00030208973,0.00016146486,0.000004477419,0.0005351579],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024111304,0.00020945213,0.00032616366,0.00031651018,0.00010502712,0.000030362557,0.00032747636,0.00018617329,0.00052603084],"category_scores_gemma":[0.00003928912,0.00017407486,0.000112846334,0.0002343774,0.00020707429,0.00016844922,0.000029226167,0.00027694443,0.00011473642],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000627114,0.000023187864,0.49167848,9.3340554e-7,0.00001992838,0.000006133008,0.0005082378,0.0000033716444,0.5069633,8.4875e-7,0.00045726515,0.00033200713],"study_design_scores_gemma":[0.000939142,0.00012773897,0.9296839,0.00007586025,0.00006692731,0.00032931165,0.0002696853,0.0000490283,0.06301705,0.00027298572,0.004749513,0.00041882924],"about_ca_topic_score_codex":0.009099366,"about_ca_topic_score_gemma":0.080152795,"teacher_disagreement_score":0.4439463,"about_ca_system_score_codex":0.0004085564,"about_ca_system_score_gemma":0.00008805765,"threshold_uncertainty_score":0.9974991},"labels":[],"label_agreement":null},{"id":"W2318637491","doi":"10.1021/es300214f","title":"Dechlorinating Microorganisms in a Sedimentary Rock Matrix Contaminated with a Mixture of VOCs","year":2012,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; University of Guelph","keywords":"Sedimentary rock; Microorganism; Matrix (chemical analysis); Geology; Biodegradation; Environmental chemistry; Environmental remediation; Microbial biodegradation; Contamination; Environmental science; Mineralogy; Chemistry; Geochemistry; Ecology; Chromatography; Bacteria","score_opus":0.002717447572763569,"score_gpt":0.19577246222423592,"score_spread":0.19305501465147235,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2318637491","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99867666,0.00007644014,0.000105379266,0.0002667115,0.000079955236,0.00028542054,0.000013505638,0.000044385593,0.00045156712],"genre_scores_gemma":[0.996914,0.000018984532,0.0027904704,0.00012834708,0.000009230999,0.000007250197,0.000005763419,0.000011660367,0.000114263035],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998302,0.000021894013,0.00027775162,0.00037300834,0.0004073411,0.00061800174],"domain_scores_gemma":[0.9994453,0.000015025142,0.00016299721,0.0002552459,0.0000025843333,0.000118825425],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00040060453,0.00018088789,0.00018797202,0.00026291914,0.00012048119,0.000008958723,0.00049554807,0.00014131698,0.0015277277],"category_scores_gemma":[0.0000203632,0.00014774792,0.000023134036,0.0014306109,0.0011323376,0.0004195981,0.00043619296,0.00020511204,0.0002816769],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010093159,0.00014110525,0.3873422,0.0000015044286,0.0000017067138,0.000003270645,0.0002556156,0.000020951875,0.61106956,0.000018605288,0.000022348204,0.0011130448],"study_design_scores_gemma":[0.00048233822,0.00015438098,0.20920376,0.000012762426,0.000006692228,0.00005007462,0.00093115185,0.00006221774,0.7875339,0.000022122538,0.0013522011,0.00018843761],"about_ca_topic_score_codex":0.00009610969,"about_ca_topic_score_gemma":0.00005423172,"teacher_disagreement_score":0.17813845,"about_ca_system_score_codex":0.0005624735,"about_ca_system_score_gemma":0.000016193293,"threshold_uncertainty_score":0.999385},"labels":[],"label_agreement":null},{"id":"W2320319116","doi":"10.1021/es200649t","title":"Anaerobic Biodegradation of Longer-Chain <i>n</i>-Alkanes Coupled to Methane Production in Oil Sands Tailings","year":2011,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":207,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Syncrude (Canada); University of Alberta","funders":"Syncrude","keywords":"Tailings; Methanogenesis; Oil sands; Biodegradation; Environmental chemistry; Methane; Chemistry; Xylene; Alkane; Environmental science; Hydrocarbon; Waste management; Pulp and paper industry; Toluene; Asphalt; Organic chemistry","score_opus":0.010208855804867292,"score_gpt":0.2056120096885819,"score_spread":0.1954031538837146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2320319116","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983875,0.000025987381,0.00004639858,0.0005905164,0.0001780519,0.0002107239,0.0000052336604,0.000052637908,0.0005029241],"genre_scores_gemma":[0.9957749,0.00008157547,0.0037160367,0.00011473892,0.00000826162,0.000013759927,0.0000055303885,0.000008400296,0.00027676733],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982037,0.000025311654,0.00035222404,0.00061688694,0.00039357893,0.00040829752],"domain_scores_gemma":[0.9993799,0.000007067661,0.00015702046,0.00034990098,0.0000045120023,0.00010162216],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00070148014,0.00016307006,0.00018701046,0.0004864777,0.000090764544,0.000007085012,0.00053365045,0.00013048272,0.0013080336],"category_scores_gemma":[0.0000906835,0.00014967399,0.000029541743,0.002063417,0.0016123785,0.00030711212,0.00032744734,0.00013256603,0.000335765],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002283231,0.00016062215,0.06453233,0.0000020367363,0.0000013486406,0.0000023004866,0.0005627707,0.00003920134,0.9203678,0.000016434618,0.00002854284,0.014263787],"study_design_scores_gemma":[0.0002115164,0.00017385642,0.062865734,0.000010472868,0.0000046890345,0.000009906674,0.0004931855,0.000101038444,0.935354,0.000119228294,0.0004729899,0.00018341221],"about_ca_topic_score_codex":0.00037180216,"about_ca_topic_score_gemma":0.00030783704,"teacher_disagreement_score":0.014986181,"about_ca_system_score_codex":0.0003584555,"about_ca_system_score_gemma":0.00001752962,"threshold_uncertainty_score":0.9996049},"labels":[],"label_agreement":null},{"id":"W2321220942","doi":"10.1021/ie402239p","title":"Waste Biomass-Extracted Surfactants for Heavy Oil Removal","year":2014,"lang":"en","type":"article","venue":"Industrial & Engineering Chemistry Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Extraction (chemistry); Pulmonary surfactant; Biomass (ecology); Chemistry; Compost; Pulp and paper industry; Toluene; Hexane; Asphalt; Green waste; Wastewater; Environmental chemistry; Environmental science; Waste management; Chromatography; Materials science; Organic chemistry; Environmental engineering; Geology","score_opus":0.0631803105303954,"score_gpt":0.29731563324631377,"score_spread":0.23413532271591836,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2321220942","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99485344,0.000010666273,0.000025150941,0.00043369006,0.00030262364,0.00016882976,0.000060552033,0.00010069615,0.0040443647],"genre_scores_gemma":[0.9944911,0.000008147422,0.0001852503,0.000013606558,0.0007909932,0.00001536107,0.000061920226,0.00003574193,0.004397907],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977689,0.00005059568,0.00032182012,0.0004525746,0.0006517906,0.00075434387],"domain_scores_gemma":[0.9989391,0.00029970726,0.000057798927,0.0003462161,0.000059170074,0.00029801638],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0015766454,0.00019899529,0.00020637865,0.00004421282,0.00014734858,0.000102507875,0.00044305017,0.0003763833,0.0011758521],"category_scores_gemma":[0.001600135,0.00019308827,0.000081397644,0.0005449943,0.00012286186,0.00012150864,0.00017478703,0.0005431534,0.0002105283],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007942634,0.00004436098,0.0005333226,0.00003064492,0.000010844585,0.000004411835,0.000018291266,0.00025216318,0.9846441,0.0000024997912,0.0074133,0.0069666137],"study_design_scores_gemma":[0.00089570164,0.000037934897,0.00016130481,0.00003130386,0.000004116704,0.00000962466,0.000014281454,0.003850734,0.85311174,0.0000051555585,0.14166708,0.00021098195],"about_ca_topic_score_codex":0.00010024565,"about_ca_topic_score_gemma":0.0000052136515,"teacher_disagreement_score":0.13425379,"about_ca_system_score_codex":0.00028406837,"about_ca_system_score_gemma":0.000050371105,"threshold_uncertainty_score":0.9997372},"labels":[],"label_agreement":null},{"id":"W2321632109","doi":"10.1139/w11-097","title":"Glucose and plant exudate enhanced enumeration of bacteria capable of degrading polycyclic aromatic hydrocarbons","year":2011,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Enumeration; Exudate; Polycyclic aromatic hydrocarbon; Microorganism; Pseudomonas putida; Bacteria; Biodegradation; Pseudomonas; Chemistry; Rhizosphere; Microbial biodegradation; Hydrocarbon; Environmental chemistry; Degradation (telecommunications); Microbiology; Biology; Organic chemistry; Botany","score_opus":0.012860904352733033,"score_gpt":0.17818572404087038,"score_spread":0.16532481968813734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2321632109","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99911207,0.00014458882,0.00003744293,0.00003409692,0.00018438557,0.00005836649,0.00003965883,0.0000011948692,0.00038820863],"genre_scores_gemma":[0.9989768,0.000045913737,0.00086162344,0.000063965665,0.00001128766,1.9956299e-7,0.000010502781,0.000004702664,0.000024987417],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99926966,0.000060162034,0.00037947387,0.00008855047,0.000026288259,0.0001758641],"domain_scores_gemma":[0.99936163,0.000018777684,0.00036565887,0.000077038196,0.00000391896,0.00017299115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018659123,0.0000816289,0.00020762245,0.00010055714,0.000035583816,0.0000044597514,0.0001319045,0.00007800463,0.0004317384],"category_scores_gemma":[0.00003101541,0.0000692275,0.000035852525,0.00008238111,0.00022261226,0.00007834709,0.00001228328,0.00007072441,0.00001175716],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017908307,0.000010668734,0.009395299,0.0000035436924,0.00001572762,0.0000050032822,0.0011405352,3.8454345e-7,0.9886993,0.000003878167,0.00019854479,0.00050917774],"study_design_scores_gemma":[0.0003008215,0.00015444365,0.02516366,0.000033081502,0.00001935771,0.00015120098,0.00008301944,0.00000566115,0.9732291,0.00006697674,0.00071338634,0.000079266494],"about_ca_topic_score_codex":0.004022643,"about_ca_topic_score_gemma":0.019253066,"teacher_disagreement_score":0.015768362,"about_ca_system_score_codex":0.000057780948,"about_ca_system_score_gemma":0.00009133357,"threshold_uncertainty_score":0.998643},"labels":[],"label_agreement":null},{"id":"W2324795887","doi":"10.1128/jb.00952-15","title":"Structural Basis of the Enhanced Pollutant-Degrading Capabilities of an Engineered Biphenyl Dioxygenase","year":2016,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; University of British Columbia","funders":"Argonne National Laboratory; National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; Office of Science; Government of Canada; National Institutes of Health; Defence Research and Development Organisation; U.S. Department of Energy","keywords":"Biphenyl; Dioxygenase; Enzyme; Polychlorinated biphenyl; Biology; Stereochemistry; Active site; Substrate specificity; Hydrolase; Biochemistry; Catabolism; Chemistry; Organic chemistry","score_opus":0.008072418143690925,"score_gpt":0.20530277127771102,"score_spread":0.1972303531340201,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2324795887","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991585,0.000012254847,0.00003151675,0.00027998094,0.000364428,0.00004956291,0.000051269923,0.0000023263206,0.00005014899],"genre_scores_gemma":[0.99943036,0.000021061245,0.0004143464,0.000040496863,0.0000465155,1.5586268e-7,3.4142863e-7,0.000004547559,0.00004216049],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99910444,0.00011314066,0.00044416788,0.00008131519,0.0001243252,0.00013259503],"domain_scores_gemma":[0.99922967,0.00006789969,0.00047142737,0.000145167,0.000026306903,0.000059540464],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021401941,0.00008196732,0.00022922161,0.000036061512,0.000023964149,0.0000029467978,0.00026142108,0.000063830856,0.0015169327],"category_scores_gemma":[0.00014789062,0.000038426173,0.00010185871,0.0000875531,0.00027838864,0.00015018012,0.000051736046,0.000061573,0.000003527779],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006147644,0.000012289158,0.008444445,0.0000041373614,0.000013228356,7.2439593e-7,0.00029191,0.000010477336,0.98647016,0.000008939648,0.000021475349,0.00466072],"study_design_scores_gemma":[0.00030540267,0.0001682025,0.30917847,0.000018251107,0.000007314828,0.000032785116,0.000071879615,0.000008281438,0.6900007,0.000073513445,0.00008908079,0.000046098212],"about_ca_topic_score_codex":0.000029095601,"about_ca_topic_score_gemma":0.000042674932,"teacher_disagreement_score":0.30073404,"about_ca_system_score_codex":0.00006644276,"about_ca_system_score_gemma":0.000023718925,"threshold_uncertainty_score":0.9993958},"labels":[],"label_agreement":null},{"id":"W2325367485","doi":"10.1093/femsec/fiv042","title":"Anaerobic alkane biodegradation by cultures enriched from oil sands tailings ponds involves multiple species capable of fumarate addition","year":2015,"lang":"en","type":"article","venue":"FEMS Microbiology Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Methylcyclopentane; Alkane; Deltaproteobacteria; Methanogenesis; Tailings; Biology; Environmental chemistry; Biodegradation; AlkB; Hydrocarbon; Enrichment culture; Clostridia; Biochemistry; Organic chemistry; Gammaproteobacteria; Chemistry; Methane; Ecology; Bacteria; Gene; 16S ribosomal RNA; Catalysis","score_opus":0.013902116062042011,"score_gpt":0.20584031999238972,"score_spread":0.19193820393034772,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2325367485","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99686986,0.00019793208,0.000024781111,0.00043989712,0.00057141297,0.00012555032,0.0009875813,0.00004976522,0.00073319464],"genre_scores_gemma":[0.98967034,0.0001598688,0.0007605331,0.0005983143,0.00006266129,0.000009556213,0.0053258273,0.000012957502,0.0033999644],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99844193,0.0001881853,0.00044663026,0.00047037104,0.00007341135,0.00037943796],"domain_scores_gemma":[0.99915385,0.000109176624,0.00035058946,0.00021654188,0.000051118444,0.00011870906],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00026794663,0.00023357401,0.0003696455,0.00006827949,0.000095106894,0.000015714193,0.0002873838,0.00042182242,0.0042740214],"category_scores_gemma":[0.00015418472,0.00019987731,0.000068066445,0.0002261839,0.0005718244,0.00016648271,0.0001504376,0.00015851934,0.00068229047],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000071849085,0.00011394347,0.028383879,0.0000026456607,0.000026281688,0.0000014362356,0.00041024512,0.000019815545,0.8336483,0.000006901463,0.13713326,0.0001813982],"study_design_scores_gemma":[0.001966422,0.00034854002,0.028158644,0.00000680812,0.000035847836,0.0000116044575,0.0005193985,0.00009928234,0.8872829,0.00010146038,0.081081346,0.00038771122],"about_ca_topic_score_codex":0.0012527824,"about_ca_topic_score_gemma":0.0048182597,"teacher_disagreement_score":0.056051914,"about_ca_system_score_codex":0.00020504658,"about_ca_system_score_gemma":0.000037616523,"threshold_uncertainty_score":0.9966362},"labels":[],"label_agreement":null},{"id":"W2327130291","doi":"10.1021/es4054384","title":"Distinct Carbon Isotope Fractionation during Anaerobic Degradation of Dichlorobenzene Isomers","year":2014,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Reductive dechlorination; Chemistry; Fractionation; Environmental chemistry; Isotopes of carbon; Kinetic isotope effect; Isotope fractionation; Isotope analysis; Organic chemistry; Biodegradation; Total organic carbon; Geology; Deuterium","score_opus":0.0036996744668851616,"score_gpt":0.18881522844789947,"score_spread":0.1851155539810143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2327130291","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967755,0.000010659661,0.00017332652,0.00032841667,0.00014431645,0.00017535436,0.0000055730843,0.00006511056,0.0023217523],"genre_scores_gemma":[0.99885136,0.0000258937,0.00079422514,0.000039418035,0.000013874674,0.0000059796657,0.000009833425,0.000008667202,0.000250761],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99847674,0.00002513132,0.00027139607,0.0004475226,0.00046366153,0.00031553453],"domain_scores_gemma":[0.999402,0.000014061912,0.00021053386,0.00029034851,0.000003886977,0.000079171616],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00032257332,0.00013970683,0.00013782052,0.00024813737,0.00022357238,0.000012825973,0.0004156559,0.00011175989,0.0010029981],"category_scores_gemma":[0.000074240364,0.00013085778,0.000031780004,0.00092817366,0.0013898636,0.00029568627,0.00028124763,0.00012484267,0.00017653458],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000056927115,0.00005931592,0.15597333,0.0000014783691,0.0000014753142,3.4338936e-7,0.000029874442,0.00007214934,0.8376555,0.000058923324,0.000008095959,0.006133849],"study_design_scores_gemma":[0.00021275741,0.00007085035,0.46491265,0.0000039581982,0.0000050600756,0.000005829979,0.00007881297,0.00058300566,0.5329616,0.00011571053,0.0009220463,0.00012771953],"about_ca_topic_score_codex":0.00009493288,"about_ca_topic_score_gemma":0.00006614311,"teacher_disagreement_score":0.3089393,"about_ca_system_score_codex":0.00047474814,"about_ca_system_score_gemma":0.000009313213,"threshold_uncertainty_score":0.99991024},"labels":[],"label_agreement":null},{"id":"W2328472251","doi":"10.1021/es4019817","title":"Design and Application of an Internal Amplification Control to Improve Dehalococcoides mccartyi 16S rRNA Gene Enumeration by qPCR","year":2013,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Strategic Environmental Research and Development Program; University of Toronto","keywords":"16S ribosomal RNA; Multiplex; Dehalococcoides; Biology; Enumeration; Ribosomal RNA; Gene; Real-time polymerase chain reaction; Molecular biology; Microbiology; Polymerase chain reaction; Chemistry; Genetics","score_opus":0.002881479004104567,"score_gpt":0.19098832850286687,"score_spread":0.1881068494987623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2328472251","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.900766,0.000016712924,0.09768276,0.00052165193,0.000038069487,0.0008716354,0.000017825394,0.000038686598,0.00004664139],"genre_scores_gemma":[0.9905107,0.000016099651,0.009067847,0.00024110635,0.000008691639,0.000085508436,0.000011542006,0.000007699717,0.000050803013],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99863565,0.000032719614,0.00026335262,0.00052186096,0.00027572626,0.000270698],"domain_scores_gemma":[0.9993842,0.0000145140875,0.00015610084,0.00029368032,0.0000066245784,0.0001448648],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034521762,0.00013345132,0.00012307845,0.00012907619,0.00016648076,0.000039772134,0.00040792656,0.0001048952,0.00043302265],"category_scores_gemma":[0.000024715084,0.00012112452,0.000014252301,0.00037553578,0.0010827002,0.0005077466,0.00015920112,0.000083474944,0.0004963314],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008258215,0.00007186015,0.012755278,6.031722e-7,0.0000015695946,1.07338096e-7,0.00007658171,0.00011798638,0.9211297,0.000013349773,0.000068689755,0.06575602],"study_design_scores_gemma":[0.000271125,0.00025577424,0.04485864,0.0000015415006,0.0000052413034,0.0000064074047,0.000095241936,0.006316884,0.9471984,0.00021212186,0.0006372714,0.00014138453],"about_ca_topic_score_codex":0.00018440928,"about_ca_topic_score_gemma":0.000008935306,"teacher_disagreement_score":0.08974468,"about_ca_system_score_codex":0.00022570598,"about_ca_system_score_gemma":0.000007978432,"threshold_uncertainty_score":0.63795024},"labels":[],"label_agreement":null},{"id":"W2329467143","doi":"10.1139/cjm-2013-0185","title":"Profiles of<i>Mycobacterium</i>communities under polycyclic aromatic hydrocarbon contamination stress in the Shenfu Irrigation Area, northeast China","year":2013,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Contamination; Environmental chemistry; Polycyclic aromatic hydrocarbon; Soil water; Canonical correspondence analysis; Mycobacterium; Environmental science; Biology; Abundance (ecology); Chemistry; Ecology; Bacteria","score_opus":0.008615787254501807,"score_gpt":0.1852085079689697,"score_spread":0.1765927207144679,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2329467143","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978015,0.000061443934,0.000010944805,0.0009932482,0.0001691277,0.0002004891,0.000031990894,0.0000018476649,0.00072942633],"genre_scores_gemma":[0.99948114,0.000013170341,0.000051943345,0.00033863733,0.000023687524,0.0000023019186,0.00005129318,0.000005588647,0.000032263124],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990025,0.00024965935,0.00040701375,0.00006925958,0.000058345682,0.00021319833],"domain_scores_gemma":[0.9993815,0.00005813681,0.0003241413,0.00013059196,0.000012152417,0.000093473114],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029783728,0.00010680503,0.00017493693,0.00013311765,0.000070715025,0.000026922464,0.00033769058,0.00009389471,0.0007533727],"category_scores_gemma":[0.000024742656,0.000073520816,0.000049126666,0.00015429739,0.00028294732,0.00015954027,0.00001521937,0.0001864304,0.00004195932],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008470947,0.000042807045,0.36292452,0.000008551356,0.000016948605,0.0000049933255,0.004297688,0.000051847914,0.630517,0.000019758318,0.00081424747,0.0012931523],"study_design_scores_gemma":[0.0004321874,0.00014973889,0.9791071,0.00007919258,0.000016564627,0.00017767372,0.0031784286,0.000054573324,0.015719013,0.00041750356,0.00052628975,0.00014172954],"about_ca_topic_score_codex":0.024252689,"about_ca_topic_score_gemma":0.15577547,"teacher_disagreement_score":0.61618257,"about_ca_system_score_codex":0.0001490617,"about_ca_system_score_gemma":0.00009455272,"threshold_uncertainty_score":0.9822449},"labels":[],"label_agreement":null},{"id":"W2329907258","doi":"10.1061/9780784412312.015","title":"Remediation of Gasoline Contaminated Soil Using Surfactant Enhanced Aquifer Remediation (SEAR)","year":2012,"lang":"en","type":"article","venue":"World Environmental And Water Resources Congress 2012","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Gasoline; Pulmonary surfactant; Environmental remediation; Contamination; Isopropyl alcohol; Solvent; Electrolyte; Chemistry; Chromatography; Environmental science; Waste management; Environmental chemistry; Organic chemistry; Electrode","score_opus":0.009935802800137021,"score_gpt":0.20374750964344474,"score_spread":0.1938117068433077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2329907258","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980439,0.00022229581,0.000033360535,0.00008621643,0.00034506377,0.00026843473,0.00004398471,0.000025718999,0.0009310044],"genre_scores_gemma":[0.9971001,0.00016433242,0.00018205596,0.00012954214,0.00011969076,0.0000041081335,0.00011930443,0.000024095876,0.002156735],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99823195,0.000113841,0.00044021223,0.00029216736,0.00040962966,0.0005121809],"domain_scores_gemma":[0.9993253,0.000031929798,0.00020469358,0.00019927147,0.000004722087,0.00023412208],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00037315048,0.00024388813,0.00025895162,0.00008243667,0.00013022547,0.000023492183,0.00013476753,0.00010147624,0.004815324],"category_scores_gemma":[0.000008495864,0.00018015275,0.000058454425,0.000098152166,0.00036459183,0.0005621105,0.0002303637,0.00012741443,0.00033286575],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000065344815,0.00011679451,0.20059422,0.000010764842,0.000015122764,7.997154e-7,0.001338039,0.00006207043,0.79564255,0.0000014156105,0.00012689349,0.002025964],"study_design_scores_gemma":[0.00080119324,0.0000480983,0.21272102,0.000021470412,0.00004699811,0.000005862516,0.00014899982,0.0005312369,0.76911044,0.000011026623,0.016229702,0.00032394586],"about_ca_topic_score_codex":0.00013532041,"about_ca_topic_score_gemma":0.00014797208,"teacher_disagreement_score":0.026532123,"about_ca_system_score_codex":0.00014020405,"about_ca_system_score_gemma":0.0000019669428,"threshold_uncertainty_score":0.9960944},"labels":[],"label_agreement":null},{"id":"W2330055492","doi":"10.1139/cjm-2014-0417","title":"Identification and characterization of phenol hydroxylase from phenol-degrading <i>Candida tropicalis</i> strain JH8","year":2014,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Candida tropicalis; Phenol; Strain (injury); Microbiology; Identification (biology); Chemistry; Biology; Biodegradation; Biochemistry; Organic chemistry; Candida albicans; Botany","score_opus":0.0051879663299164835,"score_gpt":0.17447301360055337,"score_spread":0.1692850472706369,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2330055492","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982074,0.000030159947,0.0005280041,0.00046206932,0.00027106144,0.000066633045,0.00034418804,0.000002423053,0.000088099245],"genre_scores_gemma":[0.9992592,0.000021463833,0.00015392272,0.0003411694,0.00007652446,2.4870837e-7,0.000087563465,0.0000064121073,0.00005349464],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99915653,0.00010616859,0.00039392608,0.00013637145,0.000038256654,0.00016872941],"domain_scores_gemma":[0.9992642,0.00002910162,0.00037732106,0.00009433191,0.00002338496,0.00021169722],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021847631,0.00008957923,0.0001824827,0.000075324635,0.000060883063,0.000020890408,0.00016086736,0.0000959347,0.0008492699],"category_scores_gemma":[0.000057463807,0.00007966351,0.00003720797,0.00008788423,0.00021835955,0.000106258114,0.000013704713,0.00009600828,0.000032932352],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000087813,0.000007678352,0.015985776,0.0000025229945,0.000009828882,0.0000019415847,0.00028281726,0.0000028239238,0.97906816,0.00002230414,0.0003460939,0.0042612874],"study_design_scores_gemma":[0.0013940752,0.00021862827,0.2171341,0.000056839366,0.00006400679,0.00012058936,0.00013628672,0.00014224688,0.7297496,0.00035780785,0.050297286,0.00032849496],"about_ca_topic_score_codex":0.0012786888,"about_ca_topic_score_gemma":0.006109189,"teacher_disagreement_score":0.2493185,"about_ca_system_score_codex":0.000088228764,"about_ca_system_score_gemma":0.00005490987,"threshold_uncertainty_score":0.929891},"labels":[],"label_agreement":null},{"id":"W2332951663","doi":"10.1021/es505837v","title":"Kinetics of Substrate Biodegradation under the Cumulative Effects of Bioavailability and Self-Inhibition","year":2015,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Helmholtz-Gemeinschaft","keywords":"Biodegradation; Bioavailability; Substrate (aquarium); Chemistry; Environmental chemistry; Degradation (telecommunications); Kinetics; Organic chemistry; Ecology; Biology; Pharmacology","score_opus":0.00804114603980516,"score_gpt":0.21013340500976121,"score_spread":0.20209225896995606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2332951663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988155,0.000044877677,0.00014188373,0.0004055263,0.0000561948,0.00025037865,0.000008172933,0.000023098795,0.000254361],"genre_scores_gemma":[0.99919915,0.000039261497,0.00069742743,0.00003671525,0.0000030498861,0.0000024799676,0.0000025911197,0.0000031026316,0.000016197804],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990174,0.000035855846,0.0002025796,0.00025727612,0.00032039973,0.0001664489],"domain_scores_gemma":[0.9995274,0.000030878975,0.0001649092,0.00021231492,0.000005669239,0.00005885223],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00031379022,0.00009206104,0.00010322491,0.000077634526,0.00006198575,0.000006673533,0.00019232348,0.00008006667,0.0000712711],"category_scores_gemma":[0.000044690176,0.00006413831,0.000016601996,0.0006043227,0.0037593807,0.00015755133,0.00023945032,0.0000700956,0.000034516583],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000047079934,0.00014870045,0.045438074,0.0000031156928,0.0000019220724,2.9281097e-7,0.00020564138,0.000045666748,0.95294964,0.00014197425,0.000018670527,0.0010416198],"study_design_scores_gemma":[0.00021240776,0.00019456945,0.17564565,0.0000037000948,0.000007641102,0.0000033818862,0.00035255103,0.00015402892,0.8224309,0.00079901697,0.00013413976,0.00006203722],"about_ca_topic_score_codex":0.00004018362,"about_ca_topic_score_gemma":0.000021600006,"teacher_disagreement_score":0.13051873,"about_ca_system_score_codex":0.00018390283,"about_ca_system_score_gemma":0.0000084773965,"threshold_uncertainty_score":0.9989518},"labels":[],"label_agreement":null},{"id":"W2333324465","doi":"10.1021/es201260n","title":"Quantifying the Effects of 1,1,1-Trichloroethane and 1,1-Dichloroethane on Chlorinated Ethene Reductive Dehalogenases","year":2011,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Reductive dechlorination; Chemistry; Vinyl chloride; Dehalococcoides; 1,2-Dichloroethane; Trichloroethylene; Reductive elimination; Chlorinated solvents; Biodegradation; Organic chemistry; Medicinal chemistry; Stereochemistry; Catalysis; Contamination","score_opus":0.016090680483927915,"score_gpt":0.22227309898118533,"score_spread":0.2061824184972574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2333324465","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99765927,0.00013729454,0.000011124852,0.00026991224,0.00021603395,0.00040132587,0.00000777182,0.00005814817,0.0012391417],"genre_scores_gemma":[0.9991483,0.0002561282,0.0003469766,0.00013429871,0.000009882423,0.000014382266,0.000001645517,0.000010917853,0.000077448116],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982883,0.000045356308,0.00024402585,0.0005575058,0.00041853098,0.00044629624],"domain_scores_gemma":[0.99922043,0.00007573588,0.00018468118,0.00040915987,0.0000042275587,0.000105749714],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00041711028,0.00020365149,0.00019190054,0.00021887773,0.00028735877,0.000010155977,0.00065402366,0.00013503968,0.0005356245],"category_scores_gemma":[0.0001992686,0.00013837192,0.000036858088,0.0010676691,0.0069076577,0.00018876499,0.0005336669,0.00022588558,0.00018814538],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041890864,0.00016554602,0.038135026,0.0000045553875,0.0000067038322,0.00000959296,0.0006877869,0.000002318218,0.950847,0.00031261775,0.00002095632,0.009765996],"study_design_scores_gemma":[0.00028670888,0.00046374678,0.15634719,0.000013553457,0.000013276306,0.0000275293,0.00044292113,0.00001587493,0.8416784,0.00031260477,0.00025227794,0.00014596428],"about_ca_topic_score_codex":0.00010681412,"about_ca_topic_score_gemma":0.000023137893,"teacher_disagreement_score":0.11821216,"about_ca_system_score_codex":0.00016964097,"about_ca_system_score_gemma":0.000011837762,"threshold_uncertainty_score":0.99579495},"labels":[],"label_agreement":null},{"id":"W2334195899","doi":"10.1021/es3043092","title":"Anaerobic Conversion of Chlorobenzene and Benzene to CH <sub>4</sub> and CO <sub>2</sub> in Bioaugmented Microcosms","year":2013,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Chlorobenzene; Benzene; Microcosm; Chemistry; Reductive dechlorination; Environmental chemistry; Bioremediation; Biodegradation; Organic chemistry; Bacteria; Catalysis; Geology","score_opus":0.0037543368112898847,"score_gpt":0.1857851294722747,"score_spread":0.18203079266098482,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2334195899","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99819505,0.00007405503,0.000018720359,0.0007093537,0.000061849896,0.0007967481,0.000021600224,0.000041910338,0.00008071005],"genre_scores_gemma":[0.99868584,0.00046618737,0.00046854388,0.00031729962,0.0000056873673,0.000026593028,0.000008050598,0.000012823243,0.000008952147],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99791044,0.000026359105,0.000364133,0.00076279766,0.00036360958,0.00057263504],"domain_scores_gemma":[0.999298,0.000017884036,0.00014677498,0.0002998537,0.0000046538844,0.000232842],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000323308,0.00024432517,0.0002623461,0.00044151637,0.0001826383,0.00003148778,0.0004177334,0.00019846496,0.00028771235],"category_scores_gemma":[0.00002583646,0.0002290936,0.000026295547,0.0010459374,0.0022853296,0.00038918896,0.00079975324,0.00017454302,0.0004775057],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010776406,0.00010159088,0.08940826,0.0000044430853,0.0000023504354,0.000002729438,0.000103850885,0.000009136454,0.89065737,0.0000064730148,0.00012183832,0.019571159],"study_design_scores_gemma":[0.00043946737,0.0001921406,0.23927991,0.00001359352,0.000004006719,0.000014954334,0.00024298175,0.000070459384,0.7592146,0.000040185972,0.00029417293,0.00019356517],"about_ca_topic_score_codex":0.00009996277,"about_ca_topic_score_gemma":0.000092200244,"teacher_disagreement_score":0.14987165,"about_ca_system_score_codex":0.0003546502,"about_ca_system_score_gemma":0.000012977822,"threshold_uncertainty_score":0.9342166},"labels":[],"label_agreement":null},{"id":"W2338196949","doi":"10.1021/acs.est.5b04370","title":"Long-Term Incubation Reveals Methanogenic Biodegradation of C<sub>5</sub> and C<sub>6</sub> <i>iso</i>-Alkanes in Oil Sands Tailings","year":2015,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Helmholtz-Gemeinschaft; Genome Alberta; University of Alberta; Genome Canada","keywords":"Biodegradation; Methanogenesis; Tailings; Environmental chemistry; Alkane; Oil sands; Chemistry; Methane; Incubation; Hydrocarbon; Organic chemistry; Biochemistry","score_opus":0.009074170844716341,"score_gpt":0.21386692867471288,"score_spread":0.20479275782999654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2338196949","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99873716,0.0001850591,0.00007372584,0.00041237444,0.0001289297,0.00022487126,0.000018113056,0.00005964136,0.00016012206],"genre_scores_gemma":[0.9988182,0.0006686476,0.00030937535,0.00011792056,0.000013430195,0.000013966415,0.000025470385,0.000013655833,0.000019312945],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99758685,0.00006271017,0.000506873,0.0007221841,0.0006203033,0.0005010624],"domain_scores_gemma":[0.9991204,0.000026093729,0.00031113296,0.00035129287,0.000008880727,0.00018217244],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010147901,0.0002463575,0.00027764097,0.00046253318,0.000143411,0.000030213783,0.00049528555,0.0002604434,0.000053328273],"category_scores_gemma":[0.00012436316,0.00023323354,0.000041114345,0.0014483689,0.0025754233,0.0006102874,0.0005640961,0.00020661458,0.00017937191],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016604501,0.000089094065,0.24394462,0.0000045363454,0.0000021573735,0.0000033077172,0.00015214404,0.00001790434,0.717466,0.000011531852,0.00002096138,0.03827114],"study_design_scores_gemma":[0.0005016636,0.00015039067,0.161452,0.000017050847,0.000010322496,0.000024055582,0.00016288768,0.000099071156,0.8369583,0.00035847755,0.00004397716,0.00022181845],"about_ca_topic_score_codex":0.00002802965,"about_ca_topic_score_gemma":0.00017626419,"teacher_disagreement_score":0.119492285,"about_ca_system_score_codex":0.0005526785,"about_ca_system_score_gemma":0.000033308577,"threshold_uncertainty_score":0.9510988},"labels":[],"label_agreement":null},{"id":"W2341016763","doi":"10.3389/fmicb.2016.00562","title":"Community Structure in Methanogenic Enrichments Provides Insight into Syntrophic Interactions in Hydrocarbon-Impacted Environments","year":2016,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Innovates; Genome Canada","keywords":"Methanogenesis; Microbial population biology; Biodegradation; Archaea; Bacteria; Metagenomics; Chemistry; Environmental chemistry; Bioremediation; Deltaproteobacteria; Hydrocarbon; Biology; Methane; Gammaproteobacteria; Ecology; Biochemistry; 16S ribosomal RNA; Organic chemistry; Gene","score_opus":0.00782655590339598,"score_gpt":0.22189693068063365,"score_spread":0.21407037477723767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2341016763","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998029,0.000105850384,0.00016194378,0.0004204817,0.0006278386,0.0004012846,0.000058055273,0.000014598858,0.0001809785],"genre_scores_gemma":[0.99772066,0.00012238164,0.0014915449,0.00032966316,0.0000135242235,0.000012035115,0.00006146091,0.000015688944,0.00023302932],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977653,0.0007897682,0.00050028646,0.00039485292,0.00007290209,0.00047690546],"domain_scores_gemma":[0.99936044,0.00007241952,0.00015217102,0.00033506792,0.0000027343124,0.00007717727],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003206472,0.00024930696,0.00034840233,0.00031580773,0.00006419603,0.000010632509,0.00045052837,0.00021030426,0.000764728],"category_scores_gemma":[0.00012149682,0.00018688756,0.00004916827,0.0004433953,0.00034719417,0.00024418818,0.00029572283,0.00048825511,0.000118522345],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000061112936,0.00012392316,0.33986583,0.0000030466654,0.000009825605,0.000005756721,0.0007970149,0.000016567004,0.6562383,5.898131e-7,0.0006589858,0.002219039],"study_design_scores_gemma":[0.0039658896,0.00017049783,0.7416498,0.00012645025,0.000016212816,0.000028918626,0.00039378233,0.00010863591,0.22167923,0.001151518,0.029980134,0.0007289577],"about_ca_topic_score_codex":0.0013365641,"about_ca_topic_score_gemma":0.009171914,"teacher_disagreement_score":0.43455908,"about_ca_system_score_codex":0.0013369699,"about_ca_system_score_gemma":0.00002194975,"threshold_uncertainty_score":0.8373235},"labels":[],"label_agreement":null},{"id":"W2346723388","doi":"10.1128/aem.00599-16","title":"Implications of Limited Thermophilicity of Nitrite Reduction for Control of Sulfide Production in Oil Reservoirs","year":2016,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Nitrite; Nitrate; Mesophile; Chemistry; Ammonia; Food science; Sulfide; Microbiology; Bacteria; Biochemistry; Biology; Organic chemistry","score_opus":0.007840412148942663,"score_gpt":0.19153146117814043,"score_spread":0.18369104902919778,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2346723388","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986351,0.000023678538,0.00006268915,0.0004765294,0.00003329428,0.00025155678,0.00031949248,0.0000037447194,0.00019391708],"genre_scores_gemma":[0.99937856,0.00025368074,0.00022622869,0.000019873292,0.000010568881,0.000015321482,0.00004421827,0.000005694304,0.000045864494],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992703,0.000028910486,0.00032286017,0.00022431633,0.000029239198,0.00012434508],"domain_scores_gemma":[0.9995804,0.000046439585,0.00020560836,0.00014134975,0.0000031722848,0.000023073788],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017376851,0.00008367764,0.00018456175,0.000042256932,0.000024408819,6.363377e-7,0.00008025184,0.00008952868,0.00015678712],"category_scores_gemma":[0.000014208208,0.00006137797,0.000032788892,0.00007477295,0.00049732433,0.000035968682,0.000045829656,0.000029371668,0.00000480213],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016961066,0.00012565464,0.032754406,0.000012497598,0.00000873398,1.2438558e-8,0.00007995308,0.0000131916295,0.95761853,0.000060354436,0.000053559685,0.009103504],"study_design_scores_gemma":[0.0011415455,0.00008269471,0.11958088,0.000010699891,0.000011611919,0.0000038595253,0.000098880184,0.0000017746922,0.8782818,0.00035825727,0.0003524641,0.0000755906],"about_ca_topic_score_codex":0.00003258178,"about_ca_topic_score_gemma":0.000027966063,"teacher_disagreement_score":0.08682647,"about_ca_system_score_codex":0.00005089371,"about_ca_system_score_gemma":0.0000030712424,"threshold_uncertainty_score":0.2502921},"labels":[],"label_agreement":null},{"id":"W237467462","doi":"10.1023/a:1024593231015","title":"Delivery of benzene to Alcaligenes xylosoxidans by solid polymers in a two-phase partitioning bioreactor","year":2003,"lang":"en","type":"article","venue":"Biotechnology Letters","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Benzene; Polymer; Bioreactor; Achromobacter xylosoxidans; Chemistry; Alcaligenes; Styrene; Nuclear chemistry; Materials science; Organic chemistry; Chromatography; Bacteria; Copolymer; Biology","score_opus":0.007580434617718593,"score_gpt":0.2512819480452808,"score_spread":0.24370151342756222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W237467462","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931041,0.00003348105,0.00035524042,0.0059872456,0.00009460994,0.00016842461,0.000044620934,0.000047883204,0.00016439447],"genre_scores_gemma":[0.9958096,0.000028841556,0.0011304684,0.0029771153,0.0000059767085,0.0000057833327,0.000010780613,0.000009875375,0.000021522323],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989337,0.0000458057,0.00027492427,0.00030022216,0.00012470568,0.0003206832],"domain_scores_gemma":[0.99961454,0.000017158693,0.00008855176,0.00020306309,0.0000034446568,0.00007324774],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013407675,0.00013383858,0.00016711549,0.00013493893,0.00004058497,0.0000071123327,0.00018890481,0.00013645063,0.0009990938],"category_scores_gemma":[0.000042153115,0.00013091555,0.00004147386,0.00047590144,0.00023152806,0.00006517637,0.00005979118,0.00010748314,0.00016862885],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015592645,0.000110197856,0.009900046,0.0000017499949,0.000006720187,0.0000065497557,0.00007143937,0.000026645437,0.98488843,0.00003803119,0.002434176,0.0025004025],"study_design_scores_gemma":[0.0006400723,0.00006104449,0.0013593829,0.000009303282,0.0000053965387,0.0000037390366,0.000067703106,0.000014509854,0.9889582,0.000007762506,0.008716128,0.00015679093],"about_ca_topic_score_codex":0.00045395902,"about_ca_topic_score_gemma":0.00036335457,"teacher_disagreement_score":0.008540663,"about_ca_system_score_codex":0.00010397445,"about_ca_system_score_gemma":0.000007305515,"threshold_uncertainty_score":0.9999141},"labels":[],"label_agreement":null},{"id":"W2378398343","doi":"","title":"Effects of Petroleum on the Seed Germination and Growth of Wheat and Alfalfa in Soil","year":2007,"lang":"en","type":"article","venue":"Seed","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Germination; Hypocotyl; Petroleum; Agronomy; Elongation; Dry weight; Chemistry; Biology; Environmental science; Horticulture; Materials science","score_opus":0.003955885082334462,"score_gpt":0.191137163627775,"score_spread":0.18718127854544053,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2378398343","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99850655,0.000016266782,0.0000059846348,0.00021736723,0.000024341016,0.00010050986,0.0000018278507,0.0000026592436,0.0011245076],"genre_scores_gemma":[0.9997718,0.000021524073,0.000022160068,0.0001056662,0.000004576875,3.9719635e-7,9.1709603e-7,0.00000219206,0.000070771246],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9996109,0.00002534636,0.00010219867,0.000083054576,0.00010278052,0.000075698816],"domain_scores_gemma":[0.9997808,0.0001023862,0.000048430993,0.0000428741,0.0000036415397,0.00002192173],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002826579,0.00004534194,0.00006651399,0.000026913207,0.000015889125,0.0000030792744,0.000038049515,0.00003295488,0.000018154207],"category_scores_gemma":[0.00004379087,0.000030259684,0.000009054023,0.0000859896,0.00009515853,0.000033524124,0.000027492271,0.000036466874,0.000005156561],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023048706,0.000025041494,0.23477186,0.000013915646,0.0000010852477,6.493575e-7,0.000253137,9.215454e-7,0.7644898,0.000045232417,0.000012950469,0.0003623035],"study_design_scores_gemma":[0.00021357035,0.000036219688,0.63788146,0.000009272784,0.000001748965,3.5527373e-7,0.000023510198,0.000054764438,0.36171052,0.00003997576,0.0000070516903,0.000021577427],"about_ca_topic_score_codex":0.00017327216,"about_ca_topic_score_gemma":0.00021600639,"teacher_disagreement_score":0.40310958,"about_ca_system_score_codex":0.000017859282,"about_ca_system_score_gemma":0.0000018907105,"threshold_uncertainty_score":0.123395406},"labels":[],"label_agreement":null},{"id":"W2379538575","doi":"","title":"Effect of Different Electron Donors on Reductive Dechlorination of 2,4-Dichlorophenol","year":2008,"lang":"en","type":"article","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CAE (Canada)","funders":"","keywords":"Reductive dechlorination; Electron donor; Sodium acetate; Chemistry; Sodium; Nuclear chemistry; 2,4-Dichlorophenol; Inorganic chemistry; Biodegradation; Bacteria; Catalysis; Organic chemistry; Biology","score_opus":0.006329904943616632,"score_gpt":0.2181176820175649,"score_spread":0.21178777707394827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2379538575","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920617,0.0000027509655,0.000018768142,0.000033373875,0.000064632055,0.00018667636,0.000003741252,0.000012939779,0.007615428],"genre_scores_gemma":[0.9995412,0.000040048144,0.00004616224,0.000017114744,0.000010164958,0.0000020978598,0.000004297849,0.0000042574984,0.0003346578],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993172,0.000053266824,0.00016087444,0.00014205562,0.00021667378,0.0001099192],"domain_scores_gemma":[0.9997019,0.000047300848,0.00009871506,0.000109984125,0.000007158608,0.000034900342],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010180316,0.00008757317,0.00013531558,0.000031142223,0.000028810635,0.0000011232141,0.000086815686,0.000041228403,0.0010846142],"category_scores_gemma":[0.00003347584,0.000058209826,0.000044892626,0.0001289584,0.00011435431,0.000047403293,0.000028798042,0.000046869074,0.00007545639],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018516596,0.00010510295,0.025104696,0.000006788741,0.000006612568,4.402093e-7,0.00013765233,0.000022664415,0.97141635,0.000071234244,0.00036761994,0.0025756424],"study_design_scores_gemma":[0.0003080322,0.00096584036,0.07939281,0.0000043074315,0.0000051390484,0.0000013056612,0.0000051779866,0.000021614023,0.9191616,0.000018870238,0.00006014274,0.000055127017],"about_ca_topic_score_codex":0.000080225545,"about_ca_topic_score_gemma":0.000027561147,"teacher_disagreement_score":0.05428812,"about_ca_system_score_codex":0.0000853836,"about_ca_system_score_gemma":0.0000038133198,"threshold_uncertainty_score":0.9998285},"labels":[],"label_agreement":null},{"id":"W2386621288","doi":"10.1128/genomea.00488-15","title":"Draft Genome Sequence of Methylobacterium radiotolerans,a DDE-Degrading and Plant Growth-Promoting Strain Isolated from <i>Cucurbita pepo</i>","year":2015,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Thompson Rivers University","funders":"","keywords":"Cucurbita pepo; Biology; Strain (injury); Whole genome sequencing; Botany; Cucurbita; Genome; Horticulture; Genetics; Gene","score_opus":0.02846847532471091,"score_gpt":0.22671320781141402,"score_spread":0.1982447324867031,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2386621288","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99424464,0.00021929819,0.00019658105,0.00017605486,0.00028281604,0.00037478894,0.0035309896,0.000043130884,0.0009316945],"genre_scores_gemma":[0.996675,0.00012812405,0.0015405299,0.0003819343,0.000064151805,0.000004698499,0.0010456905,0.000020638205,0.00013919894],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99791807,0.000102375496,0.00052384933,0.00052863656,0.000475258,0.00045181435],"domain_scores_gemma":[0.9991047,0.000025665588,0.00028139816,0.00025356462,0.000041441483,0.00029326402],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00055309804,0.00026750265,0.00032684143,0.00005671818,0.00010775717,0.00006709837,0.00035014047,0.000113144844,0.0005976156],"category_scores_gemma":[0.000040866118,0.00024880058,0.000050231138,0.00030014873,0.00019464245,0.00033795027,0.0002258238,0.00014368715,0.00015309837],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046043377,0.000060233753,0.025742877,0.000014881872,0.000040820672,0.000015835058,0.0033070538,0.000011708568,0.97028106,0.0000032158086,0.00013854145,0.00033769885],"study_design_scores_gemma":[0.02290417,0.004550942,0.47104123,0.0006669781,0.0007612095,0.0002927702,0.0067692893,0.011111342,0.22478423,0.002712951,0.24606259,0.008342307],"about_ca_topic_score_codex":0.00094817166,"about_ca_topic_score_gemma":0.000049746024,"teacher_disagreement_score":0.74549687,"about_ca_system_score_codex":0.00022836607,"about_ca_system_score_gemma":0.00003970282,"threshold_uncertainty_score":0.9999964},"labels":[],"label_agreement":null},{"id":"W2393400107","doi":"10.1007/s00253-016-7595-4","title":"Heavy metals species affect fungal-bacterial synergism during the bioremediation of fluoranthene","year":2016,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Fundamental Research Funds for the Central Universities","keywords":"Bioremediation; Fluoranthene; Environmental chemistry; Chemistry; Microbiology; Bacillus subtilis; Bacteria; Bioconcentration; Biology; Food science; Bioaccumulation; Phenanthrene","score_opus":0.0052360139372411635,"score_gpt":0.17779543865628641,"score_spread":0.17255942471904526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2393400107","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99637425,0.00006338636,0.00007904019,0.0026214344,0.00021079864,0.00027286238,0.00008623633,0.00006232706,0.00022965873],"genre_scores_gemma":[0.99906754,0.00035312338,0.00019794266,0.0001119134,0.000045507757,0.000007444121,0.0000124849275,0.000008298503,0.00019571898],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99899,0.000058806767,0.00027371783,0.0003437797,0.000043684882,0.0002900396],"domain_scores_gemma":[0.9994345,0.00009297317,0.00017897318,0.00025665096,0.0000065965105,0.000030341582],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00025858413,0.00017049588,0.0002489632,0.000065553235,0.00012742092,0.0000061158034,0.0002547125,0.00043468492,0.0009934049],"category_scores_gemma":[0.000036609043,0.0000871884,0.00004642478,0.00017987358,0.0014947995,0.000039661118,0.00025776177,0.00011073504,0.00018286472],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000114911796,0.000027142558,0.0016116102,0.000005803228,0.000025437965,0.0000010907595,0.000035875644,2.8440152e-7,0.9943694,0.00072080723,0.00031750512,0.002770159],"study_design_scores_gemma":[0.0005925117,0.000065147484,0.017173057,0.000005842829,0.00001686461,0.000035411027,0.000026567486,3.3020248e-7,0.9725728,0.00009916429,0.009281449,0.00013084634],"about_ca_topic_score_codex":0.000016270258,"about_ca_topic_score_gemma":0.00006939213,"teacher_disagreement_score":0.021796566,"about_ca_system_score_codex":0.000039796414,"about_ca_system_score_gemma":0.000007270065,"threshold_uncertainty_score":0.99991983},"labels":[],"label_agreement":null},{"id":"W2400046829","doi":"10.1021/es011253a","title":"Hydrogen Isotopic Enrichment:  An Indicator of Biodegradation at a Petroleum Hydrocarbon Contaminated Field Site","year":2002,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Ethylbenzene; Biodegradation; BTEX; Environmental chemistry; Benzene; Hydrocarbon; Carbon fibers; Chemistry; Isotope analysis; Organic chemistry; Geology; Materials science","score_opus":0.005071248782787172,"score_gpt":0.18869862404671345,"score_spread":0.18362737526392628,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2400046829","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99726045,0.00006539007,0.000016654638,0.0005204173,0.000085637526,0.00022907305,0.000021085705,0.0000756726,0.0017256386],"genre_scores_gemma":[0.99893916,0.00008683268,0.00017267441,0.00024511002,0.000010792836,0.000008915168,0.00001645365,0.000008496135,0.00051156647],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981788,0.000029577084,0.00030474598,0.0005839618,0.0004808565,0.00042205857],"domain_scores_gemma":[0.9992075,0.000013287534,0.0002123282,0.0004231583,0.000001711991,0.00014199765],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00022071748,0.00017545735,0.00017371813,0.00027131886,0.00023222285,0.0000125621555,0.0005951285,0.00018236316,0.006619636],"category_scores_gemma":[0.000023260984,0.0001611381,0.000040443432,0.00071093405,0.0014603623,0.00032290103,0.00046060147,0.00013723763,0.0013252691],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000053016684,0.0001549294,0.23278359,9.677279e-7,0.0000023772184,0.000002861894,0.00016344547,0.000009247634,0.7625983,0.000009805325,0.00009320458,0.004176025],"study_design_scores_gemma":[0.0004211441,0.0004568888,0.059630867,0.0000040851705,0.000010995558,0.000018534416,0.00010864097,0.0017357928,0.9314064,0.00004413661,0.0059367265,0.00022583052],"about_ca_topic_score_codex":0.00006520816,"about_ca_topic_score_gemma":0.00006120439,"teacher_disagreement_score":0.17315271,"about_ca_system_score_codex":0.0005112744,"about_ca_system_score_gemma":0.0000050670465,"threshold_uncertainty_score":0.9994523},"labels":[],"label_agreement":null},{"id":"W2404263553","doi":"10.1016/j.jbiotec.2016.05.014","title":"Enrichment and identification of biosurfactant-producing oil field microbiota utilizing electron acceptors other than oxygen and nitrate","year":2016,"lang":"en","type":"article","venue":"Journal of Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Agriculture and Agri-Food Canada; Suncor Energy (Canada); National Research Council Canada","funders":"National Research Council Canada","keywords":"Nitrate; Identification (biology); Electron acceptor; Oil field; Oxygen; Environmental chemistry; Chemistry; Environmental science; Microbiology; Biology; Ecology; Biochemistry; Organic chemistry","score_opus":0.007265113338545956,"score_gpt":0.21887346273127187,"score_spread":0.2116083493927259,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2404263553","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99539614,0.0002448778,0.000100159334,0.0040399227,0.000113013484,0.000042195665,0.000006451607,0.000010253348,0.000046986825],"genre_scores_gemma":[0.9979912,0.0014065542,0.00036996868,0.000093943316,0.000018406612,2.1109945e-7,2.2443743e-7,0.0000062567724,0.000113234855],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990978,0.00003225915,0.0004076692,0.00017994753,0.00010346382,0.00017880913],"domain_scores_gemma":[0.99930567,0.00003402685,0.0004689216,0.00013422719,0.0000141687815,0.000042991906],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040135032,0.00009667798,0.00016493932,0.000105171974,0.000038746457,0.000012974797,0.00015490652,0.00018052189,0.00017652284],"category_scores_gemma":[0.000080054735,0.00006294084,0.000032844906,0.00014330898,0.00017826319,0.00012923211,0.00009565764,0.0001109932,0.000010498],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038523638,0.000024745033,0.017760584,0.0000070905053,0.000016377639,9.867878e-7,0.00011072833,2.0129002e-7,0.9573999,0.000017513998,0.00023191456,0.024391452],"study_design_scores_gemma":[0.000311086,0.0001650698,0.033552893,0.00003093263,0.000013461335,0.00004566708,0.00007600067,0.000002078838,0.96427244,0.00006573407,0.0013866072,0.00007804262],"about_ca_topic_score_codex":0.000035529505,"about_ca_topic_score_gemma":0.00004348102,"teacher_disagreement_score":0.024313409,"about_ca_system_score_codex":0.000054988403,"about_ca_system_score_gemma":0.000010704512,"threshold_uncertainty_score":0.2566653},"labels":[],"label_agreement":null},{"id":"W2409907720","doi":"","title":"Design and optimization of surfactant based enhanced remediation of bunker C fuel oil contaminated soil","year":2015,"lang":"en","type":"dissertation","venue":"Memorial University Research Repository (Memorial University)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Mitacs","keywords":"Environmental remediation; Environmental science; Soil contamination; Waste management; Contamination; Remedial action; Underground storage tank; Hazardous waste; Petroleum; Pollution; Fuel oil; Brownfield; Environmental engineering; Engineering; Soil water; Storage tank; Civil engineering; Chemistry","score_opus":0.020580321109467684,"score_gpt":0.2380020727677929,"score_spread":0.21742175165832522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409907720","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9634185,0.00003214849,0.0010933373,0.000031962183,0.0038381158,0.0008035565,0.0000960243,0.00006730933,0.030619087],"genre_scores_gemma":[0.972361,0.0004039147,0.00203689,0.000003473105,0.0003715974,3.6023414e-7,0.00063203386,0.000042059575,0.024148662],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9956775,0.0013212941,0.00043476775,0.00071257784,0.0014242555,0.0004296614],"domain_scores_gemma":[0.99734294,0.0003264091,0.00071272795,0.00040524418,0.00089288293,0.00031978515],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013106206,0.00032999794,0.000597586,0.000696095,0.00032249402,0.000039317507,0.0006815131,0.0006878185,0.0003078893],"category_scores_gemma":[0.00030801955,0.00038560387,0.0001347597,0.0014619702,0.0005576371,0.0004992303,0.0002174809,0.0004903107,0.000017595747],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012037483,0.00036850368,0.00025337606,0.00032472555,0.00012591534,0.00014849026,0.0021303399,0.017798314,0.96359056,0.000041177947,0.002144633,0.0010365022],"study_design_scores_gemma":[0.011792279,0.0016026112,0.0010516079,0.0004164894,0.0005055538,0.000004042048,0.007959484,0.011969065,0.9557663,0.000042129377,0.007697802,0.0011926192],"about_ca_topic_score_codex":0.0020712893,"about_ca_topic_score_gemma":0.0006757083,"teacher_disagreement_score":0.008942551,"about_ca_system_score_codex":0.0011211628,"about_ca_system_score_gemma":0.0009381239,"threshold_uncertainty_score":0.9998596},"labels":[],"label_agreement":null},{"id":"W2414831661","doi":"10.1021/es301047d","title":"Aerobic Mineralization of Nitroguanidine by <i>Variovorax</i> Strain VC1 Isolated from Soil","year":2012,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Defence Research and Development Canada; National Research Council Canada; Biotechnology Research Institute","funders":"Ministère de la Défense Nationale; Defence Research and Development Canada","keywords":"Chemistry; Mineralization (soil science); Environmental chemistry; Microcosm; Biodegradation; Nitrogen cycle; Nitrogen; Organic chemistry","score_opus":0.003998515249151953,"score_gpt":0.18717439274500194,"score_spread":0.18317587749585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414831661","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99756235,0.00013251918,0.00043621968,0.0003352225,0.00017213749,0.00019180884,0.00014742599,0.000075571166,0.0009467572],"genre_scores_gemma":[0.9983983,0.0000673878,0.0009368513,0.00022744574,0.000019641138,0.00000454578,0.000097440345,0.000012399074,0.00023599995],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99822193,0.000029364039,0.00033276284,0.00041510595,0.00044032637,0.00056049635],"domain_scores_gemma":[0.99928707,0.000012977079,0.0002061025,0.0003306774,0.000002990127,0.00016020657],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00031412218,0.00018959156,0.00018261715,0.00013276793,0.00016497278,0.000015255394,0.000559071,0.0001872621,0.0048337495],"category_scores_gemma":[0.00003055848,0.00017307559,0.000039262093,0.001010002,0.002008377,0.00051768444,0.0003845053,0.00014321867,0.0007022548],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000068050313,0.00018953157,0.13499087,6.4357886e-7,0.0000033767062,4.662995e-7,0.00011849084,0.000022129494,0.8616856,0.000039615803,0.00081762223,0.00212484],"study_design_scores_gemma":[0.00038983615,0.00012857579,0.038166363,0.0000058945493,0.000014633743,0.000008558532,0.00022563049,0.00029697944,0.95252246,0.00017650312,0.00778583,0.00027874712],"about_ca_topic_score_codex":0.00028039017,"about_ca_topic_score_gemma":0.00005602394,"teacher_disagreement_score":0.09682451,"about_ca_system_score_codex":0.0003115472,"about_ca_system_score_gemma":0.000011183446,"threshold_uncertainty_score":0.996076},"labels":[],"label_agreement":null},{"id":"W2416558339","doi":"10.1007/978-1-4939-0473-0_30","title":"Liquid Chromatography/Mass Spectrometry for the Identification and Quantification of Rhamnolipids","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Chemistry; Chromatography; Mass spectrometry; High-performance liquid chromatography; Tandem mass spectrometry; Dissociation (chemistry); Organic chemistry","score_opus":0.016385124980931157,"score_gpt":0.3350356436833628,"score_spread":0.31865051870243166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416558339","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15373312,0.00008837351,0.8454028,0.00030060165,0.0001294487,0.00021271755,0.000005011019,0.0000071455106,0.00012078738],"genre_scores_gemma":[0.63326913,0.00005217368,0.36651596,0.0001112687,0.000011461307,0.000013203048,0.0000089622845,0.0000050656336,0.0000127835465],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99897647,0.00037385864,0.00026359857,0.00021749889,0.000046828674,0.00012173716],"domain_scores_gemma":[0.9993779,0.00023803624,0.00013919426,0.0002155518,0.000009695402,0.000019633435],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019417963,0.00006925694,0.0001171068,0.00006170324,0.000036989477,0.000007160228,0.00015802584,0.00008601511,0.000054091954],"category_scores_gemma":[0.0003723686,0.00005006427,0.000041621337,0.00026832262,0.00023997168,0.000019425177,0.00003941641,0.000048974864,0.000004683995],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016477314,0.000013765474,0.004765443,0.0000059700624,0.000005394754,2.3269966e-8,0.000031335596,0.0000132429905,0.98576003,0.0021210935,0.000018380604,0.007248825],"study_design_scores_gemma":[0.00016874136,0.00009791575,0.022815205,0.0000023000578,0.000009630173,7.206095e-7,0.000017383069,0.0014690958,0.97002417,0.0027686197,0.0025589226,0.00006731842],"about_ca_topic_score_codex":0.000030244646,"about_ca_topic_score_gemma":0.000012404543,"teacher_disagreement_score":0.47953597,"about_ca_system_score_codex":0.000014507901,"about_ca_system_score_gemma":0.0000029361022,"threshold_uncertainty_score":0.20415618},"labels":[],"label_agreement":null},{"id":"W2422347416","doi":"10.1007/s11356-016-7068-4","title":"Reductive dechlorination in recalcitrant sources of chloroethenes in the transition zone between aquifers and aquitards","year":2016,"lang":"en","type":"article","venue":"Environmental Science and Pollution Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Ministerio de Economía y Competitividad","keywords":"Biostimulation; Reductive dechlorination; Aquifer; Environmental chemistry; Microcosm; Biodegradation; Groundwater pollution; Denitrification; Chemistry; Sulfate; Groundwater; Environmental science; Bioremediation; Geology; Ecology; Contamination; Biology","score_opus":0.032922992368758515,"score_gpt":0.2983793478513488,"score_spread":0.2654563554825903,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2422347416","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99606735,0.000042548327,0.000028809447,0.0033005644,0.000016036096,0.00025008494,0.000021925047,0.0000024751182,0.00027020046],"genre_scores_gemma":[0.99944764,0.00040428372,0.000039015176,0.00004815812,0.000015127583,0.000006335529,0.0000013543713,0.0000023433236,0.000035716246],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983135,0.00018155616,0.00017292259,0.00027425023,0.00078229903,0.00027550422],"domain_scores_gemma":[0.9997302,0.00007437768,0.00003436561,0.00009420427,0.000004341495,0.000062457875],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034737298,0.00006753232,0.00008060519,0.00016146213,0.0001654064,0.00001905008,0.00017604309,0.000046518304,0.00015456433],"category_scores_gemma":[0.00005683347,0.000039895785,0.000011307648,0.00058126217,0.0024680616,0.00038198312,0.00008560273,0.00010005723,0.000015630985],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036652724,0.00005468485,0.1031084,0.0000026864254,8.88851e-7,0.000001282141,0.003982106,0.0000075706234,0.8395949,0.00004777964,0.000017903376,0.053145133],"study_design_scores_gemma":[0.00034445402,0.00010892844,0.8980299,0.00001885703,0.0000013735839,0.000003333185,0.0020865244,0.00003063661,0.09877489,0.0002493414,0.00028965186,0.00006208043],"about_ca_topic_score_codex":0.00042495385,"about_ca_topic_score_gemma":0.00017354255,"teacher_disagreement_score":0.7949215,"about_ca_system_score_codex":0.0002454217,"about_ca_system_score_gemma":0.000016903585,"threshold_uncertainty_score":0.90936756},"labels":[],"label_agreement":null},{"id":"W242934836","doi":"10.1023/a:1015080700477","title":"Scale-up performance of a partitioning bioreactor for the degradation of polyaromatic hydrocarbons by Sphingomonas aromaticivorans","year":2002,"lang":"en","type":"article","venue":"Biotechnology Letters","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Phenanthrene; Sphingomonas; Naphthalene; Chemistry; Hydrocarbon; Degradation (telecommunications); Dodecane; Bioreactor; Biodegradation; Aqueous solution; Aqueous two-phase system; Chromatography; Nuclear chemistry; Organic chemistry; Biochemistry","score_opus":0.010144122448844788,"score_gpt":0.18595530163624832,"score_spread":0.17581117918740352,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W242934836","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9866548,0.000035727433,0.0013384577,0.01150117,0.00008519037,0.00028067097,0.000028556058,0.000039124105,0.00003627459],"genre_scores_gemma":[0.9983076,0.00006388142,0.0011291783,0.00039508025,0.000006271578,0.000011532992,0.00000953816,0.000007550059,0.00006935868],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99924576,0.000016136786,0.0002796178,0.00015044403,0.00013333332,0.00017469989],"domain_scores_gemma":[0.99947464,0.00006882324,0.0002162765,0.00021598578,0.0000032343744,0.000021061736],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012466015,0.00009790835,0.00013806699,0.000046190096,0.000081731385,0.0000055303203,0.00023825804,0.00011985837,0.0001606955],"category_scores_gemma":[0.00003738045,0.00006494187,0.00005292514,0.0002457688,0.00047097102,0.00007722434,0.0000364711,0.00007677109,0.00003263637],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006742631,0.000036846293,0.008424459,0.000014257246,0.000012059554,6.3214486e-8,0.000117361815,0.0000054321063,0.9836701,0.000009493241,0.0031118775,0.004591264],"study_design_scores_gemma":[0.0003021756,0.00008285206,0.0059525217,0.000024982426,0.000030362442,0.0000029174848,0.00007042775,0.006983101,0.9856193,0.0000087974095,0.0008211651,0.00010141865],"about_ca_topic_score_codex":0.00007134985,"about_ca_topic_score_gemma":0.000028627308,"teacher_disagreement_score":0.01165278,"about_ca_system_score_codex":0.000035374083,"about_ca_system_score_gemma":0.000001845133,"threshold_uncertainty_score":0.26482525},"labels":[],"label_agreement":null},{"id":"W2463500010","doi":"10.1128/aem.01327-16","title":"A Diverse Soil Microbiome Degrades More Crude Oil than Specialized Bacterial Assemblages Obtained in Culture","year":2016,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; National Research Council Canada; Espace pour la vie; Canadian Forest Service; Université de Montréal; Natural Resources Canada","funders":"","keywords":"Microbiome; Biology; Metagenomics; Soil microbiology; Soil bacteria; Microbiological culture; Crude oil; Bacteria; Ecology; Biotechnology; Soil water; Bioinformatics; Petroleum engineering; Genetics; Engineering","score_opus":0.005860330714556526,"score_gpt":0.18826908353963703,"score_spread":0.1824087528250805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2463500010","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99797887,0.0000449805,0.000007529786,0.00036700116,0.00017800936,0.00016849721,0.00028793403,0.00003409773,0.0009330556],"genre_scores_gemma":[0.9968568,0.00064795214,0.00023820478,0.00045244646,0.00009014144,0.000012179531,0.00023131169,0.000020594971,0.0014503858],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984238,0.000067371584,0.00031745317,0.0006234416,0.000069662965,0.000498257],"domain_scores_gemma":[0.9995213,0.00003343807,0.00011889127,0.00019893436,0.0000010191634,0.00012643055],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012999044,0.0003234378,0.0003165446,0.000057461813,0.00011173229,0.00002379896,0.00023548103,0.00028562587,0.0031460985],"category_scores_gemma":[0.0000066350176,0.00021874436,0.00006663944,0.000100622405,0.0007428259,0.0001071726,0.00036904775,0.00011222545,0.0007325031],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012440668,0.00012452037,0.020235889,0.000004660029,0.000014315727,0.000011079241,0.00037843568,6.6591826e-7,0.97034687,0.000012970796,0.0018469782,0.0068991985],"study_design_scores_gemma":[0.005303502,0.00012367628,0.12240819,0.000030224117,0.000030421876,0.00008178795,0.0009268411,0.0000010846384,0.8012659,0.000063628686,0.06894753,0.0008172098],"about_ca_topic_score_codex":0.00006794929,"about_ca_topic_score_gemma":0.0003521958,"teacher_disagreement_score":0.16908097,"about_ca_system_score_codex":0.00023032006,"about_ca_system_score_gemma":0.00000655057,"threshold_uncertainty_score":0.9977652},"labels":[],"label_agreement":null},{"id":"W2468171822","doi":"10.1680/jenes.16.00002","title":"Ozone enhances biodegradability of heavy hydrocarbons in soil","year":2016,"lang":"en","type":"article","venue":"Journal of Environmental Engineering and Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Biodegradation; Environmental chemistry; Chemistry; Biochemical oxygen demand; Ozone; Hydrocarbon; Bioaugmentation; Petroleum; Total petroleum hydrocarbon; Bioremediation; Chemical oxygen demand; Soil contamination; Soil water; Bacteria; Environmental science; Environmental engineering; Organic chemistry; Sewage treatment","score_opus":0.0043099605897680415,"score_gpt":0.17859225688824967,"score_spread":0.17428229629848163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2468171822","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99939597,0.000073647396,0.0001694107,0.00013108035,0.000092963186,0.00003007636,0.000004901808,0.0000023424714,0.00009958368],"genre_scores_gemma":[0.99910307,0.00020189284,0.0006425842,0.000012834939,0.000009877532,1.9412771e-7,5.6720523e-8,0.0000025357376,0.00002696795],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99912685,0.000010056707,0.0002792164,0.00012899442,0.0003004708,0.00015438227],"domain_scores_gemma":[0.9996663,0.000035390043,0.000116367555,0.00008016648,0.0000011046542,0.00010068082],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056165736,0.00007306798,0.00012468589,0.00007282832,0.000023990238,0.000007040704,0.00016839939,0.00002524016,0.00012274158],"category_scores_gemma":[0.000061696504,0.00004568034,0.0000289787,0.00017028354,0.00049535686,0.00027611305,0.000069686044,0.00005795144,0.00000876276],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009093267,0.000047476842,0.0513358,0.0000016569547,0.0000010905327,0.0000016648357,0.000076950404,0.00009972808,0.9451463,0.000002153316,0.0000069626967,0.0032710868],"study_design_scores_gemma":[0.00030945134,0.000121943245,0.4677561,0.0000387993,0.0000028330753,0.000022301065,0.000033339737,0.0004433364,0.5309001,0.00002542387,0.00025641057,0.00008995472],"about_ca_topic_score_codex":0.000012983373,"about_ca_topic_score_gemma":0.000007041034,"teacher_disagreement_score":0.41642028,"about_ca_system_score_codex":0.00012881163,"about_ca_system_score_gemma":0.0000111089075,"threshold_uncertainty_score":0.18627901},"labels":[],"label_agreement":null},{"id":"W2471811809","doi":"10.1016/j.marpolbul.2016.06.087","title":"The biodegradation of crude oil in the deep ocean","year":2016,"lang":"en","type":"article","venue":"Marine Pollution Bulletin","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"ExxonMobil Research and Engineering Company","keywords":"Biodegradation; Crude oil; Oil spill; Environmental science; Petroleum engineering; Oceanography; Geology; Environmental engineering; Biology; Ecology","score_opus":0.005577120461363948,"score_gpt":0.18794708437691168,"score_spread":0.18236996391554774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2471811809","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90922946,0.000020422132,0.000092402086,0.07545662,0.00012676204,0.00010694619,0.000012030978,0.000016874736,0.014938487],"genre_scores_gemma":[0.99665636,0.00013460258,0.00010562288,0.0005719817,0.000020940239,0.000001586846,0.0000036467657,0.0000030812455,0.0025021785],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99926645,0.000103410064,0.00018999165,0.00011157895,0.00018993803,0.00013863147],"domain_scores_gemma":[0.9996539,0.000066408815,0.000085387794,0.00016846095,0.0000058675914,0.00001999057],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00052757194,0.00006276976,0.000051361094,0.000016584967,0.00008302523,0.000012922076,0.00021820782,0.000031972097,0.0032531347],"category_scores_gemma":[0.00010932716,0.00002690971,0.000028676683,0.0001482514,0.00016013985,0.00002462935,0.00009893413,0.000040987543,0.0006388873],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012430947,0.00018402548,0.14703679,0.000006417253,0.00000775231,0.0000024401525,0.00039899166,0.000012860537,0.19787063,0.0015891623,0.079387344,0.5733793],"study_design_scores_gemma":[0.00048271852,0.00003214438,0.4109318,0.0000075900166,0.0000037362297,0.0000038383027,0.00008300909,0.00002218083,0.014972058,0.00022014765,0.5731491,0.000091680864],"about_ca_topic_score_codex":0.00033442277,"about_ca_topic_score_gemma":0.0007337505,"teacher_disagreement_score":0.5732876,"about_ca_system_score_codex":0.00006060636,"about_ca_system_score_gemma":0.0000042601537,"threshold_uncertainty_score":0.997658},"labels":[],"label_agreement":null},{"id":"W2474975949","doi":"10.1007/s00253-014-6159-8","title":"Importance of Rhodococcus strains in a bacterial consortium degrading a mixture of hydrocarbons, gasoline, and diesel oil additives revealed by metatranscriptomic analysis","year":2014,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":71,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"Association Nationale de la Recherche et de la Technologie","keywords":"Rhodococcus; Actinobacteria; Bacteria; Microorganism; Chemistry; Biodegradation; Microbacterium; Food science; Strain (injury); Microbiology; Microbial biodegradation; Degradation (telecommunications); Biology; Biochemistry; Pseudomonas; Organic chemistry; Gene","score_opus":0.003966290215414236,"score_gpt":0.18943448122813858,"score_spread":0.18546819101272435,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2474975949","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99872977,0.00021968874,0.000106370724,0.00028656903,0.000030116009,0.00011778544,0.0002891374,0.000019631667,0.00020093497],"genre_scores_gemma":[0.9981992,0.0005543175,0.000962981,0.00012524893,0.000005684616,0.0000057999773,0.00012055471,0.0000059689532,0.00002020323],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988048,0.000068351175,0.00042921808,0.0004159362,0.000028786339,0.00025291595],"domain_scores_gemma":[0.9994677,0.00006486392,0.00025814437,0.0001672,0.0000042263873,0.00003788402],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027112555,0.00017718875,0.00055077195,0.00015946437,0.00003417863,0.0000032194573,0.00014964235,0.00042676128,0.000117352785],"category_scores_gemma":[0.0000353155,0.00014900399,0.000051128194,0.00038835165,0.0011950961,0.000026062102,0.00008585381,0.00017887836,0.0000021274452],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000076374745,0.000046913578,0.033013996,0.000016663662,0.000097926844,6.423207e-7,0.000091889495,5.304885e-7,0.9635445,0.00021611075,0.00016015557,0.0027343],"study_design_scores_gemma":[0.0015137509,0.00014528679,0.040517174,0.000014297879,0.00022076632,0.000017738259,0.00016974412,0.000046827216,0.95501006,0.00016848258,0.0018774559,0.00029843676],"about_ca_topic_score_codex":0.000063342355,"about_ca_topic_score_gemma":0.0011126564,"teacher_disagreement_score":0.008534458,"about_ca_system_score_codex":0.00001765621,"about_ca_system_score_gemma":0.000007923916,"threshold_uncertainty_score":0.60762066},"labels":[],"label_agreement":null},{"id":"W2478786827","doi":"10.1007/8623_2015_55","title":"Protocols for Harvesting a Microbial Community Directly as a Biofilm for the Remediation of Oil Sands Process Water","year":2015,"lang":"en","type":"book-chapter","venue":"Springer protocols handbooks/Springer protocols","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Environmental remediation; Oil sands; Biofilm; Environmental science; Process (computing); Microbial population biology; Petroleum engineering; Waste management; Geology; Ecology; Engineering; Biology; Computer science; Geography; Contamination; Bacteria; Archaeology","score_opus":0.07921126902067334,"score_gpt":0.3295334666626765,"score_spread":0.2503221976420032,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2478786827","genre_codex":"protocol","genre_gemma":"protocol","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"protocol","genre_consensus":"protocol","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000503919,0.000014277113,0.00065984257,0.00021861464,0.00015043278,0.9653642,0.00047647025,0.00030113143,0.03231107],"genre_scores_gemma":[0.0006147092,0.000002663305,0.0032323091,0.00023650471,0.00057963055,0.9205927,0.00013412345,0.00030858035,0.074298754],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9932846,0.00027799245,0.0022918575,0.0013825465,0.0013931418,0.0013698956],"domain_scores_gemma":[0.99438435,0.00047939408,0.0020894697,0.0019017282,0.00070449413,0.00044055132],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.005506235,0.0013896151,0.0015413205,0.00024010931,0.000964244,0.00046355103,0.0023363174,0.0010915281,0.0012402126],"category_scores_gemma":[0.0007143827,0.0009733074,0.00074469124,0.00016328519,0.00090394774,0.0005247817,0.0010063305,0.0010696015,0.00032373675],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008689057,0.0012437883,0.0010452899,0.012051505,0.0005857674,0.000009205982,0.0053615645,0.00016833017,0.88544285,0.0010608066,0.011285195,0.07305662],"study_design_scores_gemma":[0.0046451758,0.0012639605,0.00004610697,0.0033612484,0.0001071605,0.00000961237,0.000026559444,0.00009107149,0.39717677,0.002071172,0.5901029,0.0010982812],"about_ca_topic_score_codex":0.0002274121,"about_ca_topic_score_gemma":0.00044174344,"teacher_disagreement_score":0.57881767,"about_ca_system_score_codex":0.00067850953,"about_ca_system_score_gemma":0.0005498127,"threshold_uncertainty_score":0.99988544},"labels":[],"label_agreement":null},{"id":"W2498441911","doi":"10.1201/noe0415451369.ch349","title":"Bioremediation strategy for monoaromatic hydrocarbons in the Borden Aquifer, Canada","year":2007,"lang":"en","type":"book-chapter","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Aquifer; Bioremediation; Environmental science; Petroleum engineering; Geology; Hydrology (agriculture); Water resource management; Groundwater; Geotechnical engineering","score_opus":0.0299419359310059,"score_gpt":0.23794725151185087,"score_spread":0.20800531558084495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2498441911","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008650175,0.00006683207,0.00009712036,0.00090604473,0.00032079555,0.001412827,0.000099328245,0.000028028187,0.9884189],"genre_scores_gemma":[0.747342,0.0001429308,0.0004620587,0.004034413,0.00023353411,0.000023000506,0.0004304152,0.000057026915,0.2472746],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99861956,0.000013671818,0.00038129571,0.00028787402,0.000428867,0.00026874008],"domain_scores_gemma":[0.99941015,0.000115932715,0.00016138644,0.00023942035,0.0000039692654,0.000069111775],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00036164967,0.00023062358,0.00018447012,0.000047066107,0.00005876742,0.000028353228,0.0003279728,0.00020964952,0.0016013095],"category_scores_gemma":[0.000021924192,0.00015822584,0.000059265585,0.000056874367,0.000070174174,0.00004944715,0.000037248476,0.00016535047,0.00013700277],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019800269,0.0002917947,0.007381204,0.00016648682,0.00017924418,0.00011237889,0.0015140068,0.0003638722,0.018420218,0.02664133,0.8538724,0.09085907],"study_design_scores_gemma":[0.001527179,0.00028422597,0.0140255485,0.00008609914,0.00011964808,0.000014283528,0.00034869584,0.0023178551,0.0021143642,0.012507737,0.96495944,0.0016948964],"about_ca_topic_score_codex":0.14003547,"about_ca_topic_score_gemma":0.93102574,"teacher_disagreement_score":0.7909903,"about_ca_system_score_codex":0.00040043797,"about_ca_system_score_gemma":0.00013031664,"threshold_uncertainty_score":0.9993114},"labels":[],"label_agreement":null},{"id":"W2505254251","doi":"10.5772/2053","title":"Introduction to Enhanced Oil Recovery (EOR) Processes and Bioremediation of Oil-Contaminated Sites","year":2012,"lang":"en","type":"book","venue":"InTech eBooks","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":136,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"McGill University; U.S. Department of Energy","keywords":"Bioremediation; Enhanced oil recovery; Environmental science; Petroleum engineering; Waste management; Oil spill; Crude oil; Engineering; Contamination; Environmental engineering; Ecology","score_opus":0.008236225539059814,"score_gpt":0.20697592809737572,"score_spread":0.1987397025583159,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2505254251","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5798513,0.000341736,0.00033206504,0.00069458486,0.0018457384,0.00061062403,0.0003226416,0.00026535813,0.41573593],"genre_scores_gemma":[0.36150077,0.000232161,0.00058243825,0.0002515051,0.0007900408,0.000023790159,0.00028965622,0.00004724938,0.6362824],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985604,0.000031624215,0.00041838308,0.00044265745,0.00030127057,0.00024563997],"domain_scores_gemma":[0.99915284,0.000053063097,0.00035280694,0.00023854675,0.00007863823,0.00012408863],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00025670786,0.00027076594,0.00030606496,0.00013934578,0.00004936798,0.000026449476,0.00018099611,0.00032982958,0.0010862326],"category_scores_gemma":[0.00024498306,0.00024565967,0.000047767524,0.00009809186,0.00019493497,0.00012397049,0.00016519675,0.00019436823,0.00046198178],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005613086,0.00002165651,0.000046391502,0.00015918289,0.000016135655,4.1502787e-7,0.00048182183,2.7117719e-7,0.90037566,0.00000312894,0.0076630404,0.09117614],"study_design_scores_gemma":[0.00015213207,0.00012209988,0.000112475514,0.00011949321,0.000037374768,0.0000033810336,0.000028195042,4.779709e-7,0.87997925,0.00008992763,0.11907528,0.0002799099],"about_ca_topic_score_codex":0.000042276886,"about_ca_topic_score_gemma":0.00036019587,"teacher_disagreement_score":0.22054647,"about_ca_system_score_codex":0.0002869244,"about_ca_system_score_gemma":0.00006310986,"threshold_uncertainty_score":0.9999996},"labels":[],"label_agreement":null},{"id":"W2507212591","doi":"10.1080/10889868.2017.1312265","title":"Large-scale bioventing degradation rates of petroleum hydrocarbons and determination of scale-up factors","year":2017,"lang":"en","type":"article","venue":"Bioremediation Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Environmental science; Bioremediation; Environmental remediation; Groundwater remediation; Petroleum; Soil water; Moisture; Degradation (telecommunications); Environmental chemistry; Gasoline; Environmental engineering; Soil science; Contamination; Waste management; Chemistry; Ecology; Engineering","score_opus":0.016593709080007315,"score_gpt":0.2560224821387707,"score_spread":0.2394287730587634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2507212591","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972128,0.000020627804,0.0017962453,0.00016559118,0.00039310558,0.000083230654,0.000025755664,0.0000064844203,0.00029611544],"genre_scores_gemma":[0.998598,0.00010249073,0.0010882576,0.000013601396,0.000059046855,5.4550924e-7,0.00001741999,0.000007206398,0.000113443086],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988651,0.00005233978,0.00042167204,0.00014674981,0.00034996204,0.00016415761],"domain_scores_gemma":[0.998636,0.000032748074,0.0010376859,0.00015653388,0.000034364275,0.00010264928],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005532476,0.00010762569,0.00015992082,0.0000849316,0.00029574832,0.00006841291,0.00019086365,0.00008253069,0.00021504406],"category_scores_gemma":[0.00021828193,0.00008985644,0.00006458758,0.000067392175,0.00017274483,0.0004794542,0.00008027723,0.000096823765,0.000008465547],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011038095,0.00003551228,0.6371051,0.000006397073,0.000003906082,2.6440102e-7,0.0005320888,0.0000015766703,0.35819808,0.000003283524,0.000071258044,0.0040314784],"study_design_scores_gemma":[0.0005260192,0.000050744544,0.7351457,0.000022538083,0.000019860152,0.000004793869,0.00032699684,0.0018454655,0.26167604,0.00007121652,0.00021860501,0.000092033435],"about_ca_topic_score_codex":0.00002669251,"about_ca_topic_score_gemma":0.00016041186,"teacher_disagreement_score":0.09804058,"about_ca_system_score_codex":0.000049035312,"about_ca_system_score_gemma":0.000018700215,"threshold_uncertainty_score":0.36642393},"labels":[],"label_agreement":null},{"id":"W2511441757","doi":"10.1371/journal.pone.0161032","title":"Comparative Genomics and Metabolic Analysis Reveals Peculiar Characteristics of Rhodococcus opacus Strain M213 Particularly for Naphthalene Degradation","year":2016,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Army Research Office; U.S. Department of Defense","keywords":"Rhodococcus; Genome; Biology; Comparative genomics; Genetics; Replicon; Gene; Strain (injury); GC-content; Synteny; Microbacterium; Genomic island; Genomics; Bacteria; 16S ribosomal RNA","score_opus":0.051495226049346525,"score_gpt":0.2438965276739886,"score_spread":0.19240130162464206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2511441757","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997304,0.00003647075,0.0011027409,0.00023073444,0.000011360687,0.00036774945,0.0008673053,0.000010358292,0.00006928092],"genre_scores_gemma":[0.9942206,0.00015547157,0.0051774452,0.000047465994,0.000019867864,0.000012138409,0.00005725173,0.000005756754,0.00030400377],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990913,0.000056759633,0.00029886063,0.00021827193,0.00017476565,0.00016001934],"domain_scores_gemma":[0.9994299,0.00007622863,0.00022282165,0.00014813857,0.00003616849,0.000086741195],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002398544,0.000106980086,0.00036441375,0.000046720023,0.00004633778,0.000016809156,0.00009047215,0.000048265043,0.00037350802],"category_scores_gemma":[0.00007802642,0.00007577325,0.00006103919,0.00020553131,0.00011955648,0.0001227271,0.000040052466,0.000026114823,0.00003680486],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028962115,0.00020338727,0.055575516,0.000010961019,0.00029523403,2.9880414e-7,0.00020910334,8.708932e-7,0.9428143,0.000034101697,0.000043581767,0.0007836921],"study_design_scores_gemma":[0.00040367033,0.00006775747,0.5086002,0.000015917532,0.0006296499,2.943225e-7,0.000031911208,0.00022898967,0.48963276,0.00006790804,0.00018634996,0.00013459504],"about_ca_topic_score_codex":0.000016821139,"about_ca_topic_score_gemma":0.000038068953,"teacher_disagreement_score":0.45318154,"about_ca_system_score_codex":0.000040070114,"about_ca_system_score_gemma":0.000008981944,"threshold_uncertainty_score":0.40896508},"labels":[],"label_agreement":null},{"id":"W2512972894","doi":"10.1680/jenge.15.00035","title":"Degradation and mobility of petroleum hydrocarbons in oil sand waste","year":2016,"lang":"en","type":"article","venue":"Environmental Geotechnics","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Land reclamation; Overburden; Environmental science; Petroleum; Oil sands; Groundwater; Soil water; Carbon dioxide; Hydrocarbon; Biodegradation; Waste management; Fossil fuel; Environmental engineering; Mining engineering; Geology; Environmental chemistry; Geotechnical engineering; Soil science; Asphalt; Chemistry; Archaeology","score_opus":0.004812577143981053,"score_gpt":0.17816262166237729,"score_spread":0.17335004451839622,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2512972894","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99871534,0.00003456976,0.000098124256,0.0002000644,0.000028972167,0.000068438625,0.000029755689,0.000013280443,0.0008114308],"genre_scores_gemma":[0.99869466,0.00049577915,0.00020159542,0.000041851967,0.0000056453787,0.0000035905805,0.000005976935,0.000007180611,0.0005437502],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991435,0.000031922325,0.00022737664,0.0002489831,0.00018586656,0.0001623775],"domain_scores_gemma":[0.9996465,0.000026687268,0.00008394496,0.00018414388,2.2712571e-7,0.000058495545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019869172,0.00010630373,0.00011371989,0.000030232422,0.000025196132,0.0000037494776,0.0001002167,0.00008375913,0.00051607884],"category_scores_gemma":[0.000014675547,0.0000783961,0.000027120126,0.00006805323,0.0002666198,0.0001222334,0.00014756381,0.000060907525,0.00007202136],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015323438,0.0001096148,0.06742908,0.0000025704655,0.0000016903666,9.813881e-7,0.000037166403,0.000020471896,0.9075253,0.0000041461976,0.00004478511,0.024808874],"study_design_scores_gemma":[0.0017826649,0.00019162617,0.3648788,0.00005370377,0.000015953134,0.00001163591,0.00017765112,0.0011582727,0.62500364,0.0004021726,0.0058785784,0.00044534166],"about_ca_topic_score_codex":0.000050100676,"about_ca_topic_score_gemma":0.000035206507,"teacher_disagreement_score":0.2974497,"about_ca_system_score_codex":0.00015671403,"about_ca_system_score_gemma":0.0000027906963,"threshold_uncertainty_score":0.56507015},"labels":[],"label_agreement":null},{"id":"W2513199783","doi":"10.1002/cjce.22631","title":"Kinetic modelling of cell growth, substrate utilization, and biosurfactant production from solid agrowaste (<i>Beta vulgaris)</i> by <i>Bacillus licheniformis</i> STK 01","year":2016,"lang":"en","type":"article","venue":"The Canadian Journal of Chemical Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Bacillus licheniformis; Substrate (aquarium); Chemistry; Food science; Biochemistry; Bacteria; Biology; Bacillus subtilis","score_opus":0.01129803958420423,"score_gpt":0.16485669546333287,"score_spread":0.15355865587912865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2513199783","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974567,0.00025140223,0.0013166139,0.0006447144,0.00013988145,0.000072299925,0.000045929894,0.000006096036,0.0000663403],"genre_scores_gemma":[0.9993421,0.00010256464,0.00040649067,0.00004231113,0.000058230195,3.3044736e-7,0.000003499495,0.000013501584,0.000030997617],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990472,0.000015194766,0.00037868597,0.00013675603,0.00019086046,0.0002312675],"domain_scores_gemma":[0.99932003,0.000038109814,0.0001916366,0.000112659225,0.0000412299,0.00029630782],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021291398,0.00013248262,0.00016722351,0.000035822803,0.000042288706,0.000024303765,0.00020178698,0.00007967962,0.00013379872],"category_scores_gemma":[0.000051133295,0.00008403016,0.00004340832,0.00014505291,0.00013084878,0.00016335741,0.000020343727,0.00013358514,0.0000072939088],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009753922,0.000006773999,0.0007178461,0.000008363902,0.0000105828285,0.0000016964769,0.00015230408,0.0021146329,0.996277,0.0000044164403,0.00043289663,0.00026376615],"study_design_scores_gemma":[0.0002522406,0.000019861913,0.0002284079,0.000049995073,0.000022929664,0.000014786305,0.000008594765,0.002059449,0.996683,0.000059727157,0.00048100052,0.00012003046],"about_ca_topic_score_codex":0.0012275451,"about_ca_topic_score_gemma":0.00023602833,"teacher_disagreement_score":0.0018853523,"about_ca_system_score_codex":0.0001269578,"about_ca_system_score_gemma":0.000054356493,"threshold_uncertainty_score":0.34266502},"labels":[],"label_agreement":null},{"id":"W2513941538","doi":"10.1007/s11270-016-3012-y","title":"Biosurfactant Production by Marine-Originated Bacteria Bacillus Subtilis and Its Application for Crude Oil Removal","year":2016,"lang":"en","type":"article","venue":"Water Air & Soil Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":48,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Chemistry; Yeast extract; Biodegradation; Bioremediation; Diesel fuel; Food science; Glycerol; Chromatography; Pulp and paper industry; Bacteria; Fermentation; Organic chemistry; Biology","score_opus":0.005924186135308161,"score_gpt":0.19585780315098256,"score_spread":0.1899336170156744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2513941538","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927757,0.00001674274,0.0001786999,0.0057575353,0.00033829035,0.00033901382,0.00015064741,0.00009142371,0.00035195806],"genre_scores_gemma":[0.99333435,0.00014121526,0.00017802925,0.00018157283,0.000090375426,0.000029703542,0.0001436413,0.000018775827,0.005882341],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99863976,0.000046703048,0.00026624324,0.0005053747,0.00018695717,0.0003549724],"domain_scores_gemma":[0.9995682,0.000007560039,0.00009398861,0.00019077159,0.00003104266,0.00010839746],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029717226,0.00019037613,0.0001370597,0.00003698797,0.00016277582,0.000021105028,0.00010945512,0.00012793564,0.00048429033],"category_scores_gemma":[0.000030916523,0.000116991345,0.00004326004,0.00011223343,0.00010724822,0.00037639798,0.00009485486,0.000045023924,0.00055122544],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010207878,0.000041923493,0.000894199,0.000011287794,0.000007528319,3.4234395e-7,0.000079139536,0.0000029046298,0.9383484,0.000009249523,0.0022955996,0.058207333],"study_design_scores_gemma":[0.0006063627,0.000054933455,0.01021954,0.000009672433,0.000015225718,0.000013978829,0.0000069576918,0.00013851588,0.8895148,0.00007167574,0.09912979,0.00021851817],"about_ca_topic_score_codex":0.00016520408,"about_ca_topic_score_gemma":0.00017412947,"teacher_disagreement_score":0.09683419,"about_ca_system_score_codex":0.00025702777,"about_ca_system_score_gemma":0.00000946943,"threshold_uncertainty_score":0.7085072},"labels":[],"label_agreement":null},{"id":"W2515696551","doi":"10.3390/ijerph13090846","title":"Bioaugmentation: An Emerging Strategy of Industrial Wastewater Treatment for Reuse and Discharge","year":2016,"lang":"en","type":"review","venue":"International Journal of Environmental Research and Public Health","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":230,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"King Fahd University of Petroleum and Minerals","keywords":"Bioaugmentation; Wastewater; Pollutant; Environmental science; Sewage treatment; Industrial wastewater treatment; Reuse; Waste management; Biodegradation; Environmental engineering; Contamination; Engineering; Bioremediation; Ecology; Biology","score_opus":0.2684105797435165,"score_gpt":0.4529206364757614,"score_spread":0.1845100567322449,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2515696551","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1582152,0.8288462,0.000029763829,0.006504856,0.0008392129,0.002127763,0.0032873196,0.000007973978,0.00014172232],"genre_scores_gemma":[0.01927105,0.9799076,0.00016392533,0.000028059947,0.00030177287,0.000009964964,0.00011784483,0.000017220324,0.00018259778],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99749213,0.00032935716,0.00082394044,0.00026578878,0.00073717406,0.0003515777],"domain_scores_gemma":[0.9985236,0.00018623419,0.0006320882,0.0001562619,0.000023374094,0.00047844328],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0015503408,0.00018886161,0.0005038219,0.00026011997,0.000103360886,0.00009051067,0.0004308713,0.00012564825,0.0011188483],"category_scores_gemma":[0.00009357828,0.000116651005,0.00010982555,0.00007703376,0.00033773086,0.000426957,0.00022419992,0.00019484278,0.000014099368],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055370252,0.00036861203,0.0004895544,0.0000842078,0.00010619212,0.0000036390609,0.00018732164,9.411109e-8,0.00035868175,0.000026810549,0.00053544354,0.9977841],"study_design_scores_gemma":[0.0013870564,0.0019728346,0.0002322255,0.0007075726,0.000015351867,0.00007285341,0.00030172925,0.0000033862527,0.00008785926,0.0001311907,0.9949472,0.00014072994],"about_ca_topic_score_codex":0.00006006433,"about_ca_topic_score_gemma":0.000022198992,"teacher_disagreement_score":0.99764335,"about_ca_system_score_codex":0.0007921693,"about_ca_system_score_gemma":0.00024524287,"threshold_uncertainty_score":0.99979424},"labels":[],"label_agreement":null},{"id":"W2516540967","doi":"10.4172/2155-6199.1000358","title":"Application of Microbial Culture and Rhamnolipid for Improving the Sedimentation of Oil Sand Tailings","year":2016,"lang":"en","type":"article","venue":"Journal of Bioremediation & Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Tailings; Flocculation; Rhamnolipid; Sedimentation; Oil sands; Dewatering; Environmentally friendly; Chemistry; Environmental science; Pulp and paper industry; Environmental engineering; Environmental chemistry; Geology; Sediment; Bacteria; Materials science; Geotechnical engineering; Biology; Ecology","score_opus":0.006988902880477268,"score_gpt":0.215560810413735,"score_spread":0.20857190753325774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2516540967","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97806954,0.00007840584,0.019944254,0.0013414322,0.00024519267,0.00022587435,0.00006141559,0.0000055801606,0.000028301305],"genre_scores_gemma":[0.995762,0.00025727745,0.00367827,0.00007630304,0.00013151694,0.0000031272305,0.000023848772,0.0000063791585,0.000061263956],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988078,0.000045510573,0.0006238251,0.00012935295,0.00029285316,0.000100647696],"domain_scores_gemma":[0.9982045,0.00008924707,0.0013977237,0.00010005741,0.00016345637,0.000045014414],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005576766,0.00009766658,0.00015508472,0.00007132185,0.00006158042,0.0000133466365,0.00013000955,0.000089978115,0.000038601374],"category_scores_gemma":[0.00018661878,0.000054059157,0.000072051276,0.00018046632,0.00015618946,0.0003380739,0.000026607375,0.000048491824,0.000003325582],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000093392606,0.00003552945,0.008965401,0.000024060719,0.000008078166,2.6016243e-8,0.00034817774,0.000004975982,0.89249736,0.000025052808,0.0005342641,0.097463705],"study_design_scores_gemma":[0.0013677628,0.00020382508,0.018984882,0.000028447834,0.000060855742,0.000005122681,0.00014839882,0.0003306363,0.97559583,0.00010228764,0.0030799187,0.00009200726],"about_ca_topic_score_codex":0.00003526437,"about_ca_topic_score_gemma":0.000023669623,"teacher_disagreement_score":0.0973717,"about_ca_system_score_codex":0.00008131146,"about_ca_system_score_gemma":0.000028388546,"threshold_uncertainty_score":0.22044684},"labels":[],"label_agreement":null},{"id":"W2520590781","doi":"10.7150/jgen.16156","title":"Whole Genome Sequence Analysis of an Alachlor and Endosulfan Degrading <i>Micrococcus </i>sp. strain 2385 Isolated from Ochlockonee River, Florida","year":2016,"lang":"en","type":"article","venue":"Journal of Genomics","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"United States Agency for International Development; University of Illinois at Urbana-Champaign; U.S. Department of Defense","keywords":"Strain (injury); Whole genome sequencing; Genome; Genome size; Biology; Gene; Chemistry; Genetics","score_opus":0.013165847976049676,"score_gpt":0.22004204881277264,"score_spread":0.20687620083672298,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2520590781","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99767214,0.000099552686,0.0009459549,0.00017259955,0.00014477932,0.00007804186,0.00084455434,0.0000064296087,0.000035936573],"genre_scores_gemma":[0.99565834,0.0003593961,0.003686026,0.00012600484,0.00007348024,2.1486554e-7,0.00002630966,0.000011787117,0.00005842026],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99866265,0.00006348027,0.0005992751,0.00022778142,0.00022311253,0.00022367362],"domain_scores_gemma":[0.9988495,0.00006501083,0.0006291223,0.00019347998,0.000038184324,0.00022466555],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038775426,0.00015881598,0.00037779787,0.00015870872,0.00006632236,0.00003282924,0.00032246596,0.000094375275,0.0005199082],"category_scores_gemma":[0.000031855914,0.00011288639,0.00013795155,0.00034640753,0.00020709082,0.00034801094,0.00009063039,0.000114098744,0.000026824464],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009136898,0.00003511246,0.0279345,0.0000016040982,0.00019746824,0.00001491082,0.0005995739,0.00020380516,0.96466976,0.0000014791257,0.000033722117,0.006216684],"study_design_scores_gemma":[0.0033943146,0.00075183314,0.6977968,0.000057712,0.0013825421,0.000088927314,0.00053469464,0.0032303606,0.28039256,0.0004104427,0.011160313,0.0007994496],"about_ca_topic_score_codex":0.00014825641,"about_ca_topic_score_gemma":0.00019652177,"teacher_disagreement_score":0.68427724,"about_ca_system_score_codex":0.000245909,"about_ca_system_score_gemma":0.000035763613,"threshold_uncertainty_score":0.56926304},"labels":[],"label_agreement":null},{"id":"W2521022407","doi":"10.1016/j.ibiod.2016.08.014","title":"Exploring the potential of halophilic bacteria from oil terminal environments for biosurfactant production and hydrocarbon degradation under high-salinity conditions","year":2016,"lang":"en","type":"article","venue":"International Biodeterioration & Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":87,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Petrobras; Conselho Nacional de Desenvolvimento Científico e Tecnológico; University of British Columbia; Universidade Federal de Viçosa","keywords":"Halophile; Halomonas; Actinobacteria; Firmicutes; Proteobacteria; Biology; Bacteria; Bioremediation; Biodegradation; 16S ribosomal RNA; Food science; Microbial enhanced oil recovery; Microbiology; Kerosene; Chemistry; Microorganism; Ecology; Organic chemistry","score_opus":0.034167742463201416,"score_gpt":0.23283764976349233,"score_spread":0.1986699073002909,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2521022407","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9873224,0.0000069396897,0.0051039015,0.0052409074,0.0012015669,0.00028526378,0.00078558206,0.00003181056,0.000021646747],"genre_scores_gemma":[0.9967055,0.0003170914,0.0015137616,0.00011471638,0.00016875137,0.00006293467,0.0008396708,0.000015330746,0.00026225258],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99832517,0.00009382765,0.000533753,0.00046360717,0.0004132182,0.00017043136],"domain_scores_gemma":[0.99914944,0.00008333631,0.00042663596,0.00023152829,0.00004660785,0.000062426334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023817357,0.0002022772,0.0001533325,0.00008737429,0.00019268514,0.000075400545,0.00020633642,0.00008214969,0.00040188103],"category_scores_gemma":[0.00012699692,0.00013578674,0.00006713219,0.00012629347,0.0002731633,0.001109811,0.00008488568,0.00005709536,0.00006130826],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013046312,0.00007023159,0.0023692374,0.0000034597672,0.000030276657,2.4744705e-7,0.00008872309,0.000029552892,0.9739212,0.00007686804,0.00008942987,0.023190325],"study_design_scores_gemma":[0.0009267693,0.00012634414,0.42729756,0.0000684816,0.000067242196,0.000008317156,0.000096708005,0.0008181492,0.56712776,0.0009181742,0.0022371467,0.00030734827],"about_ca_topic_score_codex":0.0002514737,"about_ca_topic_score_gemma":0.00019330852,"teacher_disagreement_score":0.4249283,"about_ca_system_score_codex":0.00020325623,"about_ca_system_score_gemma":0.000018001592,"threshold_uncertainty_score":0.55372226},"labels":[],"label_agreement":null},{"id":"W2521691211","doi":"10.1080/09593330.2016.1239658","title":"Optimizing removal of arsenic, chromium, copper, pentachlorophenol and polychlorodibenzo-dioxins/furans from the 1–4 mm fraction of polluted soil using an attrition process","year":2016,"lang":"en","type":"article","venue":"Environmental Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hydro-Québec; Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Pentachlorophenol; Arsenic; Chemistry; Chromium; Pulmonary surfactant; Soil contamination; Environmental chemistry; Fraction (chemistry); Environmental remediation; Contamination; Box–Behnken design; Chromatography; Response surface methodology; Organic chemistry","score_opus":0.01370081215074596,"score_gpt":0.22638067257299122,"score_spread":0.21267986042224526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2521691211","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982928,0.00019816076,0.00035861527,0.00053538627,0.000070541515,0.00025624144,0.00019065366,0.000040855004,0.00005672341],"genre_scores_gemma":[0.99749607,0.00030748284,0.0020388102,0.00007333357,0.000026880098,0.000003219186,0.000019470037,0.000018218438,0.000016522998],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987555,0.00005462347,0.00034960624,0.00037979364,0.0002365123,0.00022392995],"domain_scores_gemma":[0.9993071,0.00002980511,0.00028912324,0.00031633562,0.0000031500285,0.0000545077],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012107168,0.00017499107,0.00023334323,0.00006080918,0.000117350406,0.0000065691193,0.00025757373,0.0002170365,0.0008762782],"category_scores_gemma":[0.000017858307,0.00012002907,0.00004517132,0.00016116683,0.00088023546,0.0002831019,0.00015416121,0.00011962672,0.0000316436],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060086597,0.0001670489,0.018936777,0.0000034178865,0.000016095433,0.0000041105754,0.00017046517,0.000028469698,0.9719746,0.0000051118222,0.000015363745,0.008618427],"study_design_scores_gemma":[0.0010630424,0.00016406194,0.030163575,0.000039533985,0.000037453327,0.000068896836,0.0012756535,0.00026385652,0.96629196,0.00022593948,0.00021614356,0.00018985149],"about_ca_topic_score_codex":0.00028882068,"about_ca_topic_score_gemma":0.0001166891,"teacher_disagreement_score":0.0112267975,"about_ca_system_score_codex":0.00019703036,"about_ca_system_score_gemma":0.000008031815,"threshold_uncertainty_score":0.9594632},"labels":[],"label_agreement":null},{"id":"W2531573377","doi":"10.1021/acs.estlett.6b00352","title":"Growth and Attachment-Facilitated Entry of Bacteria into Submicrometer Pores Can Enhance Bioremediation and Oil Recovery in Low-Permeability and Microporous Media","year":2016,"lang":"en","type":"article","venue":"Environmental Science & Technology Letters","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Membrane; Hexadecane; Bacteria; Bacterial growth; Chemical engineering; Microporous material; Chemistry; Biofilm; Biophysics; Bioremediation; Permeability (electromagnetism); Materials science; Biology; Biochemistry; Organic chemistry","score_opus":0.002452411348775218,"score_gpt":0.1819338316235251,"score_spread":0.1794814202747499,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2531573377","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952162,0.00006150928,0.000010566613,0.004399648,0.00008170756,0.0001405923,0.000052024116,0.000024127294,0.000013626299],"genre_scores_gemma":[0.9979367,0.0007758777,0.0009266896,0.0003220338,0.0000057444067,0.00000687367,0.0000062046224,0.000007073416,0.000012777047],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99829996,0.000046104808,0.00033498,0.00069009315,0.00025097153,0.00037787034],"domain_scores_gemma":[0.9994665,0.00005532733,0.00014510787,0.00021425776,0.0000026004427,0.000116242154],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00039603666,0.00019476147,0.00020324643,0.0002578365,0.000105391766,0.000018975024,0.00023730463,0.00013138696,0.0001727781],"category_scores_gemma":[0.000107099244,0.0001492215,0.000017395214,0.00041203533,0.005805822,0.00037997487,0.00042360282,0.0001025899,0.00001445041],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000141167875,0.000029350062,0.39434445,0.000006482165,0.0000016681169,0.0000021405435,0.00030577267,1.3043052e-7,0.5925854,0.0000010517334,0.000010076498,0.01269938],"study_design_scores_gemma":[0.00031356837,0.00004780696,0.4677446,0.000020038984,0.0000033490073,0.000008155624,0.00010937808,0.0000022112838,0.5315231,0.000058327536,0.00003425578,0.0001352252],"about_ca_topic_score_codex":0.00020404348,"about_ca_topic_score_gemma":0.00022387618,"teacher_disagreement_score":0.07340016,"about_ca_system_score_codex":0.0003055932,"about_ca_system_score_gemma":0.000010385306,"threshold_uncertainty_score":0.9968998},"labels":[],"label_agreement":null},{"id":"W2534839044","doi":"10.11159/icesdp16.104","title":"Isolation, Screening and Activity of Hydrocarbon-Degrading Bacteria from Harsh Soils","year":2016,"lang":"en","type":"article","venue":"Proceedings of the World Congress on Civil, Structural, and Environmental Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Qatar University","keywords":"Isolation (microbiology); Bacteria; Soil water; Hydrocarbon; Environmental science; Environmental chemistry; Chemistry; Geology; Biology; Soil science; Microbiology; Organic chemistry","score_opus":0.005381124078473651,"score_gpt":0.17445674889537885,"score_spread":0.1690756248169052,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2534839044","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992878,0.000024889836,0.00002553289,0.0001412793,0.00016134419,0.00012252107,0.00005746204,0.00001601195,0.0001631506],"genre_scores_gemma":[0.9989948,0.000059575454,0.0007241246,0.000021892163,0.000022887345,0.0000018529153,0.0000015896267,0.000014166549,0.00015905837],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99916846,0.000004024343,0.00019733758,0.00025958766,0.00019737311,0.0001732246],"domain_scores_gemma":[0.99961007,0.000047376216,0.00018436181,0.00008141579,0.000002436869,0.000074326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000071579845,0.00017894048,0.0001869408,0.00004282324,0.00007420454,0.00002320287,0.00015646417,0.000046960486,0.00023203497],"category_scores_gemma":[0.000018319559,0.00011496498,0.000043286287,0.00008412735,0.00020478868,0.00030182922,0.00020904878,0.00008168892,0.0000015719827],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027990056,0.000005593666,0.12015644,0.000012474383,0.000016629956,8.360234e-8,0.000054841097,0.000039682716,0.8771033,0.000028346762,0.00004368934,0.0025109285],"study_design_scores_gemma":[0.00036604865,0.000022816504,0.4997756,0.00013244095,0.000016530545,0.000002125533,0.000020145295,0.002492873,0.49681637,0.00008050136,0.00012287108,0.00015168247],"about_ca_topic_score_codex":0.00004272758,"about_ca_topic_score_gemma":0.00002462442,"teacher_disagreement_score":0.38028693,"about_ca_system_score_codex":0.000050583883,"about_ca_system_score_gemma":0.0000011230985,"threshold_uncertainty_score":0.4688136},"labels":[],"label_agreement":null},{"id":"W2547090259","doi":"10.1021/acs.est.6b02957","title":"1,2-Dichloroethane Exposure Alters the Population Structure, Metabolism, and Kinetics of a Trichloroethene-Dechlorinating <i>Dehalococcoides mccartyi</i> Consortium","year":2016,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Division of Mathematical Sciences; Division of Molecular and Cellular Biosciences; Natural Sciences and Engineering Research Council of Canada; National Science Foundation","keywords":"Dehalococcoides; Vinyl chloride; 1,2-Dichloroethane; Reductive dechlorination; Chemistry; Population; Dehalogenase; Chloride; Environmental chemistry; Biodegradation; Organic chemistry; Catalysis; Enzyme","score_opus":0.005163921728193512,"score_gpt":0.20174520522560227,"score_spread":0.19658128349740875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2547090259","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99786896,0.00014334147,0.00010484415,0.0011706916,0.00015813888,0.00031008315,0.00005151449,0.000050817434,0.00014162977],"genre_scores_gemma":[0.9988744,0.00013844573,0.00072088634,0.00015101217,0.000019208559,0.0000071058885,0.0000027930794,0.000011634991,0.000074507334],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981602,0.000042883774,0.00037471266,0.00050311297,0.0004982695,0.00042082547],"domain_scores_gemma":[0.9991616,0.000066714914,0.00028014148,0.00038845208,0.000005902168,0.00009721502],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00037034575,0.00019704089,0.000206445,0.00016693422,0.00018372362,0.000020842248,0.00056776433,0.00012863736,0.0005434107],"category_scores_gemma":[0.00013631438,0.00011272419,0.000037567486,0.0007644765,0.003868882,0.0003004768,0.00051315175,0.00012391715,0.000033556305],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010429668,0.000029796323,0.12933433,0.0000013393632,0.000003398007,9.001083e-7,0.000081575025,0.000010158321,0.84097165,0.00016972973,0.0000140568045,0.029372623],"study_design_scores_gemma":[0.00039155595,0.00010154024,0.25153917,0.0000074248283,0.000015201736,0.000023062197,0.00018050503,0.000016088556,0.7453085,0.0006798037,0.0015897182,0.00014740913],"about_ca_topic_score_codex":0.000054398337,"about_ca_topic_score_gemma":0.00005130417,"teacher_disagreement_score":0.122204855,"about_ca_system_score_codex":0.0001716094,"about_ca_system_score_gemma":0.0000071966742,"threshold_uncertainty_score":0.998842},"labels":[],"label_agreement":null},{"id":"W2553497929","doi":"10.3389/fmicb.2016.01836","title":"The Interaction between Plants and Bacteria in the Remediation of Petroleum Hydrocarbons: An Environmental Perspective","year":2016,"lang":"en","type":"review","venue":"Frontiers in Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":251,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Thompson Rivers University","funders":"Universiteit Hasselt","keywords":"Environmental remediation; Bioremediation; Nutrient; Environmental chemistry; Environmental science; Phytoremediation; Microorganism; Soil water; Ecology; Bacteria; Biology; Chemistry; Contamination","score_opus":0.012783889042577426,"score_gpt":0.2560206946347463,"score_spread":0.24323680559216887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2553497929","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12802242,0.867781,0.00003108178,0.0002660641,0.0014783231,0.001388871,0.0006945341,0.000012527917,0.00032520999],"genre_scores_gemma":[0.034470648,0.96502435,0.00009255703,0.0000387944,0.00007478156,0.000016867438,0.00023145803,0.00001380649,0.000036716196],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979092,0.00082481443,0.00054306735,0.00039061438,0.00007143943,0.00026084995],"domain_scores_gemma":[0.99909693,0.00021070048,0.0004153248,0.00024483088,0.0000013574677,0.00003086737],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007171781,0.0002361762,0.00056933775,0.0001060087,0.00006361399,0.000016410966,0.0004172339,0.000283845,0.000059784517],"category_scores_gemma":[0.000041267715,0.00012358285,0.0000761197,0.0000946091,0.00045157326,0.000106203115,0.00011561175,0.0002955386,0.000037394857],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012723911,0.00020466166,0.048153903,0.00018009782,0.00014123802,0.00000969231,0.0038474735,5.38184e-7,0.025511015,0.000011858599,0.0057925857,0.9160197],"study_design_scores_gemma":[0.00050056813,0.00016743407,0.007438386,0.0006074747,0.000056347533,0.000043457378,0.0024838706,0.000005401424,0.00017231896,0.00014391111,0.9880285,0.00035232422],"about_ca_topic_score_codex":0.00006455238,"about_ca_topic_score_gemma":0.00020325212,"teacher_disagreement_score":0.9822359,"about_ca_system_score_codex":0.00051242573,"about_ca_system_score_gemma":0.000019551208,"threshold_uncertainty_score":0.5039562},"labels":[],"label_agreement":null},{"id":"W2554145695","doi":"","title":"Modelling of dissolution and bioremediation of chlorinated ethene DNAPL source zones","year":2014,"lang":"en","type":"dissertation","venue":"Library and Archives Canada (Government of Canada)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Bioremediation; Dissolution; Chlorinated solvents; Environmental chemistry; Environmental science; Waste management; Petroleum engineering; Contamination; Chemistry; Environmental engineering; Geology; Groundwater; Engineering; Geotechnical engineering; Biology; Ecology; Organic chemistry","score_opus":0.003969835725557661,"score_gpt":0.13847409422528836,"score_spread":0.1345042584997307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2554145695","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98809505,0.00011243657,0.00050933595,0.00021254586,0.0001640149,0.00015593588,0.00015493736,0.000004370006,0.010591368],"genre_scores_gemma":[0.9943883,0.00038922275,0.0004219541,0.000050503873,0.000018707253,0.0000014040207,0.000116116906,0.000013616959,0.0046001626],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99826425,0.000040232284,0.00037155402,0.00021071837,0.0009640255,0.00014923223],"domain_scores_gemma":[0.99922734,0.00007375488,0.00047633515,0.00011240359,7.395594e-7,0.00010943579],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000020212523,0.00016431468,0.00026857844,0.000023326651,0.000060132003,0.0000054612697,0.00012013143,0.00006575159,0.00006656298],"category_scores_gemma":[0.000004357625,0.00015454221,0.000023763168,0.000076876524,0.00010325103,0.00014303831,0.000053587217,0.000086754786,4.245362e-9],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010717594,0.00007551259,0.033800192,0.001023763,0.00009440867,0.0000029755315,0.00081744057,0.0055633355,0.92570925,0.0034968778,0.00033113052,0.028013336],"study_design_scores_gemma":[0.00043905523,0.00010769141,0.08260254,0.00025723508,0.00005967732,8.8280757e-7,0.0015128198,0.030499065,0.8799146,0.00026125094,0.0039893338,0.00035587428],"about_ca_topic_score_codex":0.007324836,"about_ca_topic_score_gemma":0.027373195,"teacher_disagreement_score":0.048802346,"about_ca_system_score_codex":0.000007735251,"about_ca_system_score_gemma":0.00017799297,"threshold_uncertainty_score":0.99928546},"labels":[],"label_agreement":null},{"id":"W255637494","doi":"10.1007/978-3-662-06066-7_2","title":"Microbial Community Dynamics During Bioremediation of Hydrocarbons","year":2004,"lang":"en","type":"book-chapter","venue":"Soil biology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Bioremediation; Microbial population biology; Biodegradation; Environmental science; Degradation (telecommunications); Microbial biodegradation; Population; Environmental chemistry; Biochemical engineering; Environmental engineering; Ecology; Chemistry; Biology; Contamination; Microorganism; Bacteria; Engineering","score_opus":0.010080300489703658,"score_gpt":0.20519077458048907,"score_spread":0.1951104740907854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W255637494","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7183903,0.00004133915,0.000016807804,0.00019806494,0.0006106082,0.00029736338,0.0005572173,0.00006624492,0.2798221],"genre_scores_gemma":[0.98444736,0.00018010163,0.00009695108,0.00011074415,0.00007594104,0.0000012247639,0.0007806528,0.000028905051,0.014278104],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99888104,0.000065521155,0.00042799662,0.00026808193,0.0001146985,0.00024268843],"domain_scores_gemma":[0.99910784,0.000038284717,0.00039681507,0.00037001405,0.00001152242,0.00007551062],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00020062683,0.0002687239,0.00036330026,0.000083022554,0.0001211628,0.0000058430423,0.0003549545,0.00063373917,0.0017606379],"category_scores_gemma":[0.00003062343,0.00025511842,0.00014202733,0.000048170423,0.00063303486,0.000035767614,0.00030270035,0.0004972085,0.0005340741],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008036788,0.00012498627,0.008259161,0.000072946954,0.00009093306,0.0000053809945,0.00040245435,0.000044694225,0.97914314,0.008555735,0.00045571759,0.0027645086],"study_design_scores_gemma":[0.012617897,0.0027555898,0.09537912,0.001079899,0.0008903368,0.00016387731,0.00029736423,0.00043008392,0.5965622,0.22570626,0.055778477,0.008338887],"about_ca_topic_score_codex":0.00086382154,"about_ca_topic_score_gemma":0.0045734015,"teacher_disagreement_score":0.3825809,"about_ca_system_score_codex":0.0005048682,"about_ca_system_score_gemma":0.000044644,"threshold_uncertainty_score":0.9999901},"labels":[],"label_agreement":null},{"id":"W2558755311","doi":"10.1107/s2053273314095552","title":"Structural insights into broad substrate range of biphenyl dioxygenases &amp; dehydrogenase","year":2014,"lang":"en","type":"article","venue":"Acta Crystallographica Section A Foundations and Advances","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Biphenyl; Chemistry; Dioxygenase; Stereochemistry; NAD+ kinase; Ternary complex; Enzyme; Dibenzofuran; Oxidoreductase; Substrate (aquarium); Dehydrogenase; Active site; Biochemistry; Organic chemistry; Biology","score_opus":0.009277848291414866,"score_gpt":0.23170973695845873,"score_spread":0.22243188866704386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2558755311","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99815893,0.00014904558,0.00049912,0.00012404191,0.00019305722,0.00015575376,0.000009173466,0.000047295867,0.0006635753],"genre_scores_gemma":[0.99792415,0.00070771587,0.001099952,0.00009451338,0.000050470087,0.000006614113,0.00004927004,0.000008730607,0.00005860917],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989893,0.00007237864,0.00028765964,0.00030213455,0.00018772816,0.00016080849],"domain_scores_gemma":[0.99943703,0.000059950788,0.00018971179,0.00017680546,0.000029344163,0.00010715876],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011130464,0.00015420561,0.00015849277,0.00011893547,0.00030468637,0.000051254898,0.00011124432,0.00006960661,0.00063837],"category_scores_gemma":[0.00005422533,0.00012581426,0.00006828172,0.00055175164,0.00041629144,0.0005617813,0.000050857703,0.00008385225,0.00000401287],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035738092,0.000056283436,0.09165532,0.000025439133,0.000020865446,3.1097704e-7,0.00040089153,0.00010785278,0.9019663,0.00013694247,0.000090315974,0.0055037807],"study_design_scores_gemma":[0.001217321,0.00026477253,0.39567095,0.000034859222,0.0000570237,0.000020459944,0.00023751278,0.0007598791,0.0057318066,0.0064911717,0.5888822,0.0006320071],"about_ca_topic_score_codex":0.00040548365,"about_ca_topic_score_gemma":0.010870356,"teacher_disagreement_score":0.89623445,"about_ca_system_score_codex":0.000021692134,"about_ca_system_score_gemma":0.000007893467,"threshold_uncertainty_score":0.6989704},"labels":[],"label_agreement":null},{"id":"W2559178234","doi":"10.2172/1281780","title":"Varying Conditions for Hexanoic Acid Degradation with BioTiger™","year":2016,"lang":"en","type":"report","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Tailings; Hexanoic acid; Bioremediation; Biodegradation; Oil sands; Degradation (telecommunications); Oil refinery; Chemistry; Petroleum; Environmental chemistry; Bioaugmentation; Yeast extract; Naphthenic acid; Contamination; Environmental science; Pulp and paper industry; Waste management; Food science; Organic chemistry; Biology; Ecology; Materials science","score_opus":0.03044624283911392,"score_gpt":0.27240370038237405,"score_spread":0.24195745754326012,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2559178234","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05141077,0.00012550321,0.020291204,0.0028102053,0.0029042338,0.0043549095,0.0034844491,0.0005450517,0.91407365],"genre_scores_gemma":[0.7384963,0.0008522354,0.00936503,0.0010027775,0.00067120587,0.00011632072,0.0034116232,0.0001254992,0.245959],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99861485,0.000016309645,0.00026169233,0.00039694755,0.00045615187,0.00025404055],"domain_scores_gemma":[0.99935144,0.00004176827,0.00023625231,0.000223886,0.000049491955,0.00009715567],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00023378631,0.00021165906,0.00019954894,0.000052028157,0.00014313325,0.00003747833,0.00015282223,0.00020672017,0.013137381],"category_scores_gemma":[0.000056941648,0.00012713426,0.00007970632,0.00012356867,0.00012107946,0.00015014884,0.000050882696,0.00007700452,0.0008907718],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000337483,0.00007892515,0.008858016,0.000060606006,0.000064001986,0.000003803685,0.000026239613,0.0000031327602,0.54782504,0.000034421162,0.43187687,0.011135214],"study_design_scores_gemma":[0.00095421844,0.00019261197,0.0080568995,0.0001701712,0.00011167528,0.00004627213,0.000016733324,0.000021430042,0.1767511,0.00010739136,0.8127572,0.0008142866],"about_ca_topic_score_codex":0.00013362487,"about_ca_topic_score_gemma":0.00040755974,"teacher_disagreement_score":0.6870855,"about_ca_system_score_codex":0.00039824098,"about_ca_system_score_gemma":0.00014990856,"threshold_uncertainty_score":0.99988717},"labels":[],"label_agreement":null},{"id":"W2559775379","doi":"10.1002/rem.21494","title":"Practical Perspectives of 1,4‐Dioxane Investigation and Remediation","year":2016,"lang":"en","type":"article","venue":"Remediation Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Health Canada; Dow Chemical Company; U.S. Environmental Protection Agency; U.S. Department of Defense","keywords":"1,4-Dioxane; Chlorinated solvents; Environmental remediation; Environmental chemistry; Environmental science; Waste management; Bioremediation; Laundry; Contamination; Chemistry; Sorption; Cosmetics; Biochemical engineering; Organic chemistry; Engineering","score_opus":0.01790554911629344,"score_gpt":0.25383449931666985,"score_spread":0.2359289502003764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2559775379","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98304576,0.000025868172,0.0026066853,0.013488888,0.00020660555,0.000103698425,0.000006088889,0.000015544445,0.00050085306],"genre_scores_gemma":[0.9949608,0.0005139126,0.0039639273,0.00010584,0.00018798056,8.046046e-7,0.0000030520027,0.0000064526944,0.00025722958],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99877745,0.00011441201,0.0003190616,0.00015348513,0.000500254,0.00013531836],"domain_scores_gemma":[0.99919534,0.000117216005,0.00035951854,0.00008191519,0.00008660468,0.00015941734],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00079431967,0.000083101266,0.00010320882,0.00006327877,0.00007421421,0.000023134662,0.00006097914,0.00007359384,0.0013884604],"category_scores_gemma":[0.0013497807,0.00005457872,0.00003119904,0.00015296605,0.00019496639,0.00054923835,0.000034490997,0.00009540638,0.00010327969],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000286004,0.00003202243,0.120127216,0.0000030048259,0.000008754944,0.000001940647,0.001347733,0.0000021699861,0.86027926,0.00018203675,0.008635241,0.009352004],"study_design_scores_gemma":[0.00194227,0.0002735731,0.78405035,0.000059093287,0.000040555642,0.000190247,0.0011695739,0.00020225927,0.20095786,0.0023573665,0.008441052,0.0003157843],"about_ca_topic_score_codex":0.0000051012107,"about_ca_topic_score_gemma":0.0000139055355,"teacher_disagreement_score":0.66392314,"about_ca_system_score_codex":0.00014307494,"about_ca_system_score_gemma":0.000041494153,"threshold_uncertainty_score":0.9995244},"labels":[],"label_agreement":null},{"id":"W2560373031","doi":"10.1016/j.envpol.2016.12.002","title":"Sequential biodegradation of complex naphtha hydrocarbons under methanogenic conditions in two different oil sands tailings","year":2016,"lang":"en","type":"article","venue":"Environmental Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":48,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Helmholtz-Alberta Initiative; Jabatan Perkhidmatan Awam Malaysia; Universiti Malaysia Perlis; Canada Foundation for Innovation; Natural Resources Canada; Canadian Natural Resources Limited","keywords":"Naphtha; Tailings; Oil sands; Biodegradation; Environmental science; Petroleum; Environmental chemistry; Waste management; Pulp and paper industry; Chemistry; Petroleum engineering; Geology; Organic chemistry; Asphalt; Catalysis; Engineering; Materials science","score_opus":0.017264538213975854,"score_gpt":0.25058461052464576,"score_spread":0.2333200723106699,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2560373031","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976818,0.000018049112,0.00045417785,0.00058249664,0.00011990497,0.00011888825,0.00022084972,0.000021701191,0.0007821524],"genre_scores_gemma":[0.99894434,0.000086995264,0.00011470189,0.00015850198,0.000025614885,0.0000071031272,0.00015660675,0.000012404094,0.00049372204],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986359,0.00010566767,0.0003681062,0.00031723507,0.0003153243,0.00025777708],"domain_scores_gemma":[0.99953413,0.000024881425,0.00016679874,0.00018460162,8.827137e-7,0.00008870114],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001410442,0.00017488784,0.00016911991,0.00008421904,0.00007293636,0.000007641565,0.00013519466,0.000070343944,0.005226675],"category_scores_gemma":[0.0000087203225,0.00013113742,0.00009067405,0.00013885039,0.00039044255,0.00020855309,0.000107451546,0.000067062625,0.00037194905],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025764935,0.00017524889,0.032734863,0.0000017356459,0.000010417907,8.021244e-7,0.000058986952,0.000047579917,0.9642645,0.000057281963,0.0001287482,0.0024940523],"study_design_scores_gemma":[0.0017099794,0.00006184838,0.4749815,0.000022116601,0.00002290134,0.0000063395937,0.00007820809,0.00021856315,0.52181745,0.0004543976,0.00039157682,0.00023516017],"about_ca_topic_score_codex":0.00022469253,"about_ca_topic_score_gemma":0.0003695278,"teacher_disagreement_score":0.4424471,"about_ca_system_score_codex":0.0005747526,"about_ca_system_score_gemma":0.000006741564,"threshold_uncertainty_score":0.99568266},"labels":[],"label_agreement":null},{"id":"W2563566315","doi":"10.1016/j.biortech.2016.12.086","title":"Screening selectively harnessed environmental microbial communities for biodegradation of polycyclic aromatic hydrocarbons in moving bed biofilm reactors","year":2016,"lang":"en","type":"article","venue":"Bioresource Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Biostimulation; Biofilm; Microbial inoculant; Biodegradation; Pollutant; Environmental chemistry; Bioaugmentation; Bioremediation; Polycyclic aromatic hydrocarbon; Microbial population biology; Contamination; Environmental science; Bacteria; Chemistry; Bioreactor; Biology; Ecology; Organic chemistry","score_opus":0.01154264846069515,"score_gpt":0.20757855295873423,"score_spread":0.1960359044980391,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2563566315","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978589,0.000026186899,0.0007301562,0.00074539566,0.00003762508,0.00038746596,0.00005427746,0.00009668504,0.0000633514],"genre_scores_gemma":[0.99746007,0.00002064763,0.0023126635,0.00005695522,0.000010449662,0.000019409868,0.000033088818,0.000020140864,0.00006656583],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99883103,0.00006116689,0.00038258472,0.00025297783,0.00013058816,0.00034165938],"domain_scores_gemma":[0.9993214,0.000116721894,0.00025048008,0.00026811857,8.196452e-7,0.000042450723],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020274399,0.00018486407,0.00023900776,0.00033135692,0.00009090297,0.000008542885,0.00035990853,0.0002572378,0.00008667709],"category_scores_gemma":[0.000067534645,0.00014620426,0.00006216483,0.00039742058,0.0006110957,0.00010254748,0.00015105476,0.00010613007,0.000034513043],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042830652,0.000079781596,0.17234494,0.0000022126342,0.000009118624,3.9373143e-7,0.000221527,3.2657462e-7,0.81730485,0.0000063523726,0.000077524346,0.009910121],"study_design_scores_gemma":[0.001354704,0.00016158099,0.08977016,0.00006620114,0.000015542346,0.00000694828,0.00079735834,0.00018990789,0.9049479,0.00023726534,0.0021861293,0.00026634312],"about_ca_topic_score_codex":0.00034648104,"about_ca_topic_score_gemma":0.000417337,"teacher_disagreement_score":0.08764299,"about_ca_system_score_codex":0.00017943434,"about_ca_system_score_gemma":0.000009800502,"threshold_uncertainty_score":0.5962037},"labels":[],"label_agreement":null},{"id":"W2572573145","doi":"10.1016/j.micpath.2017.01.017","title":"Antioxidant and antiproliferative potential of biosurfactants isolated from Lactobacillus casei and their anti-biofilm effect in oral Staphylococcus aureus strains","year":2017,"lang":"en","type":"article","venue":"Microbial Pathogenesis","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":157,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Faculté de pharmacie, Université de Montréal","keywords":"Lactobacillus casei; DPPH; Staphylococcus aureus; Microbiology; Chemistry; Antioxidant; Biofilm; Antimicrobial; IC50; Food science; MTT assay; Potency; Minimum inhibitory concentration; Antibacterial activity; Bacteria; In vitro; Biology; Biochemistry","score_opus":0.008839314440506592,"score_gpt":0.21722509070918272,"score_spread":0.20838577626867613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2572573145","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99673074,0.00012223417,0.00004280088,0.0001091298,0.00020886505,0.00051123515,0.0021982305,0.000023579063,0.000053187778],"genre_scores_gemma":[0.99933094,0.00018894773,0.00028093712,0.00007836007,0.000035944828,0.000002032895,0.000041345967,0.000023442934,0.000018076551],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981381,0.00020908192,0.00044105426,0.00063717837,0.00015604935,0.0004185279],"domain_scores_gemma":[0.9990211,0.00004020227,0.00034518793,0.00041584374,0.000022559727,0.00015506861],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00038497898,0.0003749939,0.00056755234,0.00008166675,0.00030852712,0.00013918048,0.0003050479,0.00023826135,0.00026236352],"category_scores_gemma":[0.00007010249,0.00029604352,0.000088379296,0.00013481796,0.00059213105,0.00028678103,0.00036300233,0.00014605229,0.000026378848],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001202817,0.00007359997,0.2639936,0.000012441198,0.000026414413,0.0000493017,0.0002729603,0.000008763839,0.7303098,4.1445827e-7,0.000048715014,0.0050837407],"study_design_scores_gemma":[0.0011686744,0.00012978335,0.5988155,0.00003007853,0.000021033224,0.0000063520506,0.000049828494,0.00025855578,0.39923567,0.000007802229,0.000037527836,0.00023921227],"about_ca_topic_score_codex":0.0025190064,"about_ca_topic_score_gemma":0.0022955,"teacher_disagreement_score":0.33482188,"about_ca_system_score_codex":0.00005556757,"about_ca_system_score_gemma":0.000025175988,"threshold_uncertainty_score":0.99994916},"labels":[],"label_agreement":null},{"id":"W2578290912","doi":"10.1016/j.scitotenv.2017.01.038","title":"Methanogenic biodegradation of paraffinic solvent hydrocarbons in two different oil sands tailings","year":2017,"lang":"en","type":"article","venue":"The Science of The Total Environment","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Helmholtz-Alberta Initiative; Natural Sciences and Engineering Research Council of Canada; Jabatan Perkhidmatan Awam Malaysia; Universiti Malaysia Perlis; Canada Foundation for Innovation; Natural Resources Canada; Canadian Natural Resources Limited","keywords":"Tailings; Oil sands; Biodegradation; Environmental chemistry; Chemistry; Solvent; Methanogenesis; Methane; Waste management; Environmental science; Organic chemistry; Asphalt; Materials science","score_opus":0.014340158747995744,"score_gpt":0.24160049821613971,"score_spread":0.22726033946814397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2578290912","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997261,0.000025341827,0.000006622847,0.00101011,0.00017549304,0.00013791055,0.000005816084,0.000003602482,0.0013740979],"genre_scores_gemma":[0.9992862,0.000071539755,0.00008543272,0.00001646375,0.000009437667,0.0000042252786,7.2542696e-7,0.0000046582363,0.00052135915],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99840844,0.00005931265,0.00031942574,0.00027742228,0.00067502825,0.00026035064],"domain_scores_gemma":[0.9985988,0.00002872066,0.0004324214,0.0008802698,0.0000016952453,0.000058106114],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00090967386,0.0001288808,0.00015927658,0.000031489108,0.00031629598,0.000026731543,0.0013193047,0.000026339394,0.00028155674],"category_scores_gemma":[0.000075018055,0.00006884149,0.00010119054,0.00013202814,0.0023049386,0.00016445472,0.0008675428,0.00010403611,0.00005633502],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001364078,0.00010861478,0.0031809513,0.000002011492,0.0000041417247,1.4110977e-7,0.00028186344,0.0018653906,0.9921137,0.000030962507,0.00001153567,0.0023870445],"study_design_scores_gemma":[0.0003904718,0.00004108024,0.226546,0.000020615973,0.000018238356,0.0000017947732,0.000057411646,0.0032674153,0.76926416,0.00026508185,0.000020341811,0.00010740322],"about_ca_topic_score_codex":0.000449922,"about_ca_topic_score_gemma":0.00006063786,"teacher_disagreement_score":0.22336505,"about_ca_system_score_codex":0.00018578085,"about_ca_system_score_gemma":0.00002027351,"threshold_uncertainty_score":0.8492642},"labels":[],"label_agreement":null},{"id":"W2587128906","doi":"10.1016/j.biortech.2017.02.007","title":"Microbial degradation of four crude oil by biosurfactant producing strain Rhodococcus sp.","year":2017,"lang":"en","type":"article","venue":"Bioresource Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":92,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Environment Canada; National Key Research and Development Program of China; China Scholarship Council; Natural Sciences and Engineering Research Council of Canada; National Natural Science Foundation of China","keywords":"Rhodococcus; Strain (injury); Degradation (telecommunications); Biodegradation; Microbial biodegradation; Chemistry; Crude oil; Rhodococcus equi; Microbial enhanced oil recovery; Microbiology; Food science; Bacteria; Microorganism; Biology; Organic chemistry; Biochemistry; Petroleum engineering; Engineering; Enzyme","score_opus":0.01489533475875441,"score_gpt":0.22960784112737653,"score_spread":0.21471250636862213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2587128906","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99497294,0.000043348435,0.000057186382,0.0029532744,0.00014940888,0.00016340346,0.00018863428,0.00013648793,0.0013352968],"genre_scores_gemma":[0.9964664,0.00004500745,0.0021136065,0.00009055801,0.00002931139,0.000004230015,0.000027582051,0.000020230264,0.0012030873],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99844736,0.000037165333,0.0003827183,0.0005126263,0.00022191674,0.0003982044],"domain_scores_gemma":[0.9985149,0.000016447342,0.0005141579,0.0008555033,0.000021741631,0.00007723367],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033558093,0.0002142948,0.0002574752,0.00010680309,0.00030356293,0.000051784034,0.000915326,0.0003215716,0.0007206846],"category_scores_gemma":[0.000302996,0.0001912875,0.00006758404,0.00020663037,0.0008415897,0.00013389665,0.000414569,0.00018849084,0.0002695013],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018921255,0.00006543264,0.0652253,0.000007963306,0.000009245803,0.0000037827238,0.000057394824,0.0000017380806,0.88188887,0.000019945173,0.0046173385,0.048084076],"study_design_scores_gemma":[0.00059951184,0.000100077894,0.0422134,0.00003067186,0.000016495716,0.000016367228,0.0000776707,0.000029060437,0.9194842,0.00004702445,0.037096087,0.00028943695],"about_ca_topic_score_codex":0.00040279396,"about_ca_topic_score_gemma":0.00029755707,"teacher_disagreement_score":0.04779464,"about_ca_system_score_codex":0.000107003965,"about_ca_system_score_gemma":0.000019602683,"threshold_uncertainty_score":0.78909904},"labels":[],"label_agreement":null},{"id":"W2589606885","doi":"10.1007/s11270-017-3292-x","title":"Polycyclic Aromatic Hydrocarbon Oxidation from Concentrates Issued from an Attrition Process of Polluted Soil Using the Fenton Reagent and Permanganate","year":2017,"lang":"en","type":"article","venue":"Water Air & Soil Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Permanganate; Chemistry; Environmental chemistry; Degradation (telecommunications); Potassium permanganate; Fenton's reagent; Hydrocarbon; Reagent; Advanced oxidation process; Environmental remediation; Contamination; Hydrogen peroxide; Fenton reaction; Inorganic chemistry; Organic chemistry; Catalysis","score_opus":0.016658768463515473,"score_gpt":0.2570892171583224,"score_spread":0.24043044869480693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2589606885","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980057,0.000045177778,0.000057050194,0.0012723168,0.00016323502,0.00025161586,0.00006545177,0.000028477694,0.00011099542],"genre_scores_gemma":[0.9993042,0.000043304703,0.0000657662,0.00022522287,0.000083340754,0.0000031049578,0.00022228154,0.0000128113525,0.000040020703],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99874693,0.00011628322,0.00030115168,0.0003208208,0.00027731594,0.0002375167],"domain_scores_gemma":[0.99927616,0.000007632866,0.00027222288,0.00035179922,0.000005600424,0.00008656649],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018652652,0.00016781206,0.00016807066,0.000026363574,0.00043411012,0.00009760784,0.00023443591,0.00010623246,0.000113266724],"category_scores_gemma":[0.000017560524,0.000111400564,0.000039215007,0.00005113569,0.00028735734,0.0005745478,0.00007976866,0.00007949958,0.000043383014],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004087407,0.000057166464,0.014279967,0.0000042170013,0.000016168833,0.0000010049727,0.002094235,0.00010498353,0.9817312,5.4606573e-7,0.00002325882,0.00164643],"study_design_scores_gemma":[0.0005083654,0.000031278458,0.3077847,0.000038544546,0.000049575763,0.0000012777202,0.00017983798,0.012109908,0.6787236,0.00041266868,0.000025242938,0.00013501818],"about_ca_topic_score_codex":0.015946727,"about_ca_topic_score_gemma":0.002505064,"teacher_disagreement_score":0.30300757,"about_ca_system_score_codex":0.000105751664,"about_ca_system_score_gemma":0.000010612034,"threshold_uncertainty_score":0.9906062},"labels":[],"label_agreement":null},{"id":"W2592401530","doi":"10.1139/cjss2013-001","title":"Hexachlorobenzene accumulation in rice plants as affected by farm manure and urea applications in dissimilar soils","year":2013,"lang":"en","type":"article","venue":"BioOne Complete (BioOne)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Manure; Chemistry; Agronomy; Shoot; Soil water; Hexachlorobenzene; Bioavailability; Bioconcentration; Oryza sativa; Urea; Environmental chemistry; Environmental science; Bioaccumulation; Biology; Pesticide; Soil science","score_opus":0.12963693872849455,"score_gpt":0.2452823030099015,"score_spread":0.11564536428140695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2592401530","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962866,0.00011208421,0.00012497272,0.0006196375,0.000045442157,0.001084271,0.00017391406,0.000059636648,0.0014934478],"genre_scores_gemma":[0.9983283,0.000117742966,0.0003327832,0.00045075227,0.000024609106,0.000051274266,0.00045135876,0.000018055582,0.00022507123],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983675,0.00008578897,0.00038528163,0.00051329343,0.0002508116,0.00039735384],"domain_scores_gemma":[0.999338,0.000067758556,0.00013729403,0.0002772845,0.000010751778,0.00016894376],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00016469367,0.0002513853,0.00024946372,0.00010296383,0.00010995127,0.00007451136,0.00025054973,0.00016584029,0.0012032432],"category_scores_gemma":[0.0000229151,0.00022867785,0.00003378868,0.0004238103,0.00011744687,0.00023281253,0.00016689407,0.00016749078,0.0007954911],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019561892,0.00024703055,0.063361056,0.000017155617,0.0000060776756,0.000002312177,0.00023401325,0.000026833564,0.9286486,0.000026463631,0.0034889474,0.003921984],"study_design_scores_gemma":[0.0010325253,0.00005181778,0.97029346,0.000029660903,0.0000062478416,0.00000530971,0.00012506609,0.0015244645,0.016756402,0.00015847835,0.009624772,0.0003917867],"about_ca_topic_score_codex":0.0032213943,"about_ca_topic_score_gemma":0.0018842596,"teacher_disagreement_score":0.9118922,"about_ca_system_score_codex":0.00014946303,"about_ca_system_score_gemma":0.000009450869,"threshold_uncertainty_score":0.9999825},"labels":[],"label_agreement":null},{"id":"W2598980243","doi":"10.1016/j.jhazmat.2017.03.061","title":"Biodegradation of isopropanol and acetone under denitrifying conditions by Thauera sp. TK001 for nitrate-mediated microbially enhanced oil recovery","year":2017,"lang":"en","type":"article","venue":"Journal of Hazardous Materials","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Denitrifying bacteria; Biodegradation; Nitrate; Chemistry; Acetone; Denitrification; Environmental chemistry; Pulp and paper industry; Organic chemistry; Nitrogen","score_opus":0.012521706461391524,"score_gpt":0.2508299153140254,"score_spread":0.23830820885263385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2598980243","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99746346,0.000045204855,0.00027238918,0.0006962124,0.00056934834,0.00015772978,0.00062066485,0.000007591824,0.00016737446],"genre_scores_gemma":[0.9977741,0.00047999152,0.001165599,0.00014733966,0.00008016051,0.0000025701793,0.00006119269,0.000014410205,0.00027458984],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987677,0.00006237117,0.0006283954,0.00015703094,0.00019024893,0.00019425908],"domain_scores_gemma":[0.99826527,0.00006309265,0.0013379914,0.00016886067,0.000078038516,0.00008676954],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052742363,0.00014462012,0.0003491891,0.000055737448,0.00022978381,0.00017575295,0.0002404881,0.00012087376,0.0008565424],"category_scores_gemma":[0.00019361591,0.00011771627,0.00006947626,0.000041694133,0.00018475993,0.00046705856,0.00006349927,0.00006582054,0.000030290741],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002340195,0.00007034947,0.0003771607,0.000032496147,0.00003513517,0.0000018256725,0.000055659228,0.0000044762755,0.99366647,0.000003435586,0.004696608,0.0008223669],"study_design_scores_gemma":[0.0013346943,0.00017582373,0.0046403203,0.00006416112,0.00004747553,0.00002991582,0.000047035304,0.0000027063859,0.9926723,0.00016096665,0.0006853538,0.0001392162],"about_ca_topic_score_codex":0.00007680473,"about_ca_topic_score_gemma":0.000060368093,"teacher_disagreement_score":0.0042631594,"about_ca_system_score_codex":0.00006920015,"about_ca_system_score_gemma":0.00004586037,"threshold_uncertainty_score":0.9378538},"labels":[],"label_agreement":null},{"id":"W2603843566","doi":"10.1139/cjss2012-012","title":"A rapid bioassay to screen soils for toxicity of residual petroleum hydrocarbons","year":2012,"lang":"en","type":"article","venue":"BioOne Complete (BioOne)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Bioassay; Petroleum; Environmental chemistry; Soil water; Environmental remediation; Toxicity; Soil contamination; Environmental science; Pesticide; Chemistry; Contamination; Ecology; Soil science; Biology","score_opus":0.21876012818969448,"score_gpt":0.24742780609666307,"score_spread":0.028667677906968586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2603843566","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904292,0.0001132572,0.0014084515,0.0017947475,0.00032837596,0.00081530056,0.0010244953,0.0000867592,0.003999408],"genre_scores_gemma":[0.99237514,0.00001807741,0.005757017,0.0009957675,0.00023843713,0.000016388829,0.000105643776,0.000028003846,0.00046552563],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977879,0.00009986625,0.0005075635,0.00042959192,0.00042527748,0.0007497828],"domain_scores_gemma":[0.99877393,0.00011067696,0.00021193868,0.00046126937,0.000019102446,0.0004230782],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00068954367,0.0002819351,0.00038063826,0.000104531064,0.00015545604,0.000026558404,0.00045715945,0.00014295737,0.0013562724],"category_scores_gemma":[0.00011618312,0.00025228626,0.00016112346,0.00035248915,0.00024027584,0.00018335729,0.0003224727,0.00010259277,0.00084091956],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001259514,0.00024188006,0.0133277625,0.000013893089,0.000026873031,4.919223e-7,0.00019610907,0.0000056188887,0.95436555,0.000120449986,0.029224535,0.002350889],"study_design_scores_gemma":[0.0017463227,0.0006760766,0.15573102,0.000051411465,0.00006452692,0.000009035971,0.00013895506,0.00037417977,0.6255794,0.00007745033,0.21466948,0.00088211335],"about_ca_topic_score_codex":0.00038795272,"about_ca_topic_score_gemma":0.00031865758,"teacher_disagreement_score":0.32878613,"about_ca_system_score_codex":0.00013090427,"about_ca_system_score_gemma":0.000021646269,"threshold_uncertainty_score":0.99999297},"labels":[],"label_agreement":null},{"id":"W2605853676","doi":"10.5539/enrr.v7n2p37","title":"Distribution of Dehalococcoides 16S rRNA and Dehalogenase Genes in Contaminated Sites","year":2017,"lang":"en","type":"article","venue":"Environment and Natural Resources Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Dehalococcoides; Dehalogenase; Bioremediation; 16S ribosomal RNA; Ribosomal RNA; Reductive dechlorination; Gene; Biology; Contamination; Environmental chemistry; Chemistry; Vinyl chloride; Ecology; Genetics","score_opus":0.025693405128338877,"score_gpt":0.28843203455857847,"score_spread":0.26273862943023957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2605853676","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99794835,0.0012704964,9.2953803e-7,0.00028485956,0.000014370389,0.0002067635,0.000025012281,0.0000039659544,0.00024526144],"genre_scores_gemma":[0.9974067,0.0019421225,0.000041181967,0.000010240696,0.000013825862,0.0000035759244,0.00002684581,0.000004927524,0.00055057555],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99882317,0.000112077454,0.0001685671,0.00027271357,0.00035306753,0.00027039953],"domain_scores_gemma":[0.9995232,0.00009629604,0.00007912432,0.00020239082,0.000005565873,0.00009340145],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006580916,0.0000996087,0.00013051518,0.00004608372,0.0003056152,0.00006439431,0.00020516886,0.00007965349,0.00028248836],"category_scores_gemma":[0.00015038332,0.00007772925,0.00001978752,0.00005917572,0.0009921419,0.00014884028,0.0004610604,0.00019724596,0.000036263173],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055319066,0.000029965426,0.5771337,0.000007696742,0.0000033025985,0.000007192651,0.00017648583,0.000001918437,0.40334907,0.000007089161,0.0001004569,0.01912778],"study_design_scores_gemma":[0.00042054185,0.000067330715,0.9337319,0.000013679668,0.000002753482,0.000002255949,0.00011049224,0.00022911781,0.058428552,0.000042468964,0.0068600434,0.000090834474],"about_ca_topic_score_codex":0.00049380335,"about_ca_topic_score_gemma":0.0003809624,"teacher_disagreement_score":0.3565982,"about_ca_system_score_codex":0.00008215448,"about_ca_system_score_gemma":0.000002792645,"threshold_uncertainty_score":0.36555883},"labels":[],"label_agreement":null},{"id":"W2606966028","doi":"10.1139/cjc-2016-0653","title":"Theoretical study on the hydrolytic step in the biotransformation of β-hexachlorocyclohexane degraded by haloalkane dehalogenase LinB","year":2017,"lang":"en","type":"article","venue":"Canadian Journal of Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Natural Science Foundation of China","keywords":"Chemistry; Biotransformation; Hydrolysis; Computational chemistry; Dehalogenase; Catalysis; Stereochemistry; Enzyme; Organic chemistry","score_opus":0.010577174113768528,"score_gpt":0.21301750984604992,"score_spread":0.2024403357322814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2606966028","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923817,0.000024151524,0.000003816475,0.0027544172,0.00004385364,0.00013306177,0.000025444731,8.5525494e-7,0.004632687],"genre_scores_gemma":[0.9996838,0.000008117207,0.000005004645,0.00024132078,0.000027692928,8.2305024e-7,0.0000024370404,0.0000041650515,0.000026656968],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991331,0.000057870304,0.00030439327,0.000081673694,0.00024938042,0.00017357344],"domain_scores_gemma":[0.9992267,0.000064043714,0.00024825384,0.00028501474,0.000013533317,0.00016249312],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007118715,0.00009265553,0.00012068753,0.000016256356,0.00016287187,0.00006136712,0.00071928516,0.00006435337,0.001295218],"category_scores_gemma":[0.00018788868,0.000051267507,0.00005353793,0.000060424543,0.0004219446,0.00007920573,0.000011370865,0.0002469447,0.000013811478],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000089443965,0.0002912826,0.10049983,0.000018177761,0.000037066173,0.00012602951,0.003928075,0.00002708189,0.88608855,0.00009006308,0.0066645397,0.0021398768],"study_design_scores_gemma":[0.0021592553,0.0003438425,0.16242774,0.00010295047,0.000059664442,0.00015386398,0.0043752,0.00019486013,0.82686657,0.00042189495,0.0025746326,0.0003195095],"about_ca_topic_score_codex":0.00079991866,"about_ca_topic_score_gemma":0.0024613857,"teacher_disagreement_score":0.061927907,"about_ca_system_score_codex":0.00010900972,"about_ca_system_score_gemma":0.00007969669,"threshold_uncertainty_score":0.99961776},"labels":[],"label_agreement":null},{"id":"W2607284357","doi":"10.2174/0929866524666170404162730","title":"Impact of Salt Concentration and pH on Surface Charged Residues: Controlling Protein Association Pathways in Carboxylesterase EstGtA2","year":2017,"lang":"en","type":"article","venue":"Protein and Peptide Letters","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; PROTEO; Université du Québec à Trois-Rivières","funders":"","keywords":"Carboxylesterase; Ionic strength; Circular dichroism; Chemistry; Protein secondary structure; Enzyme; Biophysics; Salt (chemistry); Thermal stability; Dynamic light scattering; Biochemistry; Crystallography; Chemical engineering; Biology; Organic chemistry; Aqueous solution","score_opus":0.011998496918802965,"score_gpt":0.23069531986689376,"score_spread":0.21869682294809079,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2607284357","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99745613,0.000016742932,0.000009653358,0.0013825415,0.00002311698,0.0008337451,0.00003265967,0.000011131347,0.00023427316],"genre_scores_gemma":[0.999459,0.000020029052,0.00016336032,0.0002472285,0.000024213987,0.0000089447685,0.000008283166,0.0000076260444,0.000061310384],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990098,0.000102932005,0.00022939917,0.0002420934,0.00020104971,0.0002147218],"domain_scores_gemma":[0.99939156,0.00003101516,0.00033766704,0.00016052816,0.000009418826,0.00006979684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045411615,0.00013291344,0.00018599234,0.000014860145,0.00012931084,0.00009239267,0.000093045564,0.00007816444,0.00005335532],"category_scores_gemma":[0.00016913158,0.000112320915,0.000033921606,0.000038866623,0.00009003225,0.00018343302,0.000037167945,0.00012696395,0.000011538435],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007428494,0.000020014206,0.32562634,0.000009296187,0.000005536392,0.0000023844354,0.00028184245,0.000039969676,0.6734973,0.0000054699694,0.000039074755,0.00039848135],"study_design_scores_gemma":[0.0017325752,0.00014681976,0.71772724,0.00012276713,0.0000055149258,5.6125043e-7,0.00001618241,0.000461048,0.27952817,0.00003314708,0.00004441755,0.00018155461],"about_ca_topic_score_codex":0.0017414253,"about_ca_topic_score_gemma":0.0005266367,"teacher_disagreement_score":0.39396912,"about_ca_system_score_codex":0.0001791204,"about_ca_system_score_gemma":0.000012367328,"threshold_uncertainty_score":0.4580314},"labels":[],"label_agreement":null},{"id":"W2607416672","doi":"10.1080/13102818.2017.1309992","title":"Production and characterization of biosurfactant by free and immobilized cells from<i>Ochrobactrum intermedium</i>isolated from the soil of southern Algeria with a view to environmental application","year":2017,"lang":"en","type":"article","venue":"Biotechnology & Biotechnological Equipment","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Agence Universitaire de la Francophonie","keywords":"Chemistry; Calcium alginate; Solubility; Hexadecane; Phenanthrene; Strain (injury); Chromatography; Calcium; Food science; Organic chemistry; Biology","score_opus":0.004718496283947762,"score_gpt":0.18163210048774298,"score_spread":0.1769136042037952,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2607416672","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98797286,0.000094736344,0.0008069134,0.009284234,0.00006236924,0.0008643724,0.0008235083,0.00008588199,0.000005101376],"genre_scores_gemma":[0.9979413,0.00097070547,0.0008191742,0.00013051947,0.000010315833,0.000024498742,0.00007847729,0.000013443733,0.000011570161],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984154,0.000041831525,0.00041850162,0.00066443806,0.00022002916,0.00023976516],"domain_scores_gemma":[0.99840873,0.000024052526,0.0005596023,0.00093335815,0.000007770445,0.000066508364],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019389973,0.00025018599,0.00034149544,0.000041235005,0.00019498073,0.00003417964,0.0006856422,0.00059033954,0.00017666981],"category_scores_gemma":[0.00007121611,0.0001574493,0.000032479264,0.00013159307,0.0017454904,0.00008639819,0.00096330454,0.00023159625,0.000037361828],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015730366,0.00014596044,0.005773035,0.0000048084416,0.00003161619,5.821287e-7,0.00009930585,4.2081396e-7,0.97022563,0.000010024715,0.00004535809,0.023505952],"study_design_scores_gemma":[0.00048123577,0.00042266905,0.02241377,0.000053802687,0.00003579654,0.0000021462681,0.00016399396,0.00008551018,0.9745492,0.00012433951,0.0014733833,0.00019417293],"about_ca_topic_score_codex":0.00050548534,"about_ca_topic_score_gemma":0.00019366854,"teacher_disagreement_score":0.023311779,"about_ca_system_score_codex":0.00007209268,"about_ca_system_score_gemma":0.0000076243136,"threshold_uncertainty_score":0.6431332},"labels":[],"label_agreement":null},{"id":"W2609741027","doi":"10.1016/j.scitotenv.2017.04.144","title":"Optimization of moving bed biofilm reactors for oil sands process-affected water treatment: The effect of HRT and ammonia concentrations","year":2017,"lang":"en","type":"article","venue":"The Science of The Total Environment","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Helmholtz-Alberta Initiative; Alberta Innovates; Shell Canada; Natural Sciences and Engineering Research Council of Canada; Syncrude; Alberta Environment and Parks; Canadian Natural Resources Limited","keywords":"Moving bed biofilm reactor; Chemistry; Hydraulic retention time; Ammonia; Biofilm; Nitrification; Environmental chemistry; Pulp and paper industry; Environmental engineering; Nitrogen; Sewage treatment; Environmental science; Bacteria; Biology; Biochemistry","score_opus":0.00693304744290989,"score_gpt":0.21885141950690068,"score_spread":0.21191837206399078,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2609741027","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986714,0.0000110767705,0.000012009788,0.00054685486,0.000072982126,0.00042312682,0.000028506991,0.0000032424732,0.00023080086],"genre_scores_gemma":[0.9996148,0.000041957206,0.00012948144,0.0000052879104,0.000008020056,0.000012039857,0.0000026077666,0.000004491508,0.00018135941],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99910015,0.000056222198,0.00019055343,0.00018036095,0.0002991634,0.0001735473],"domain_scores_gemma":[0.9991697,0.000055722154,0.0002852635,0.00044816645,0.0000060150464,0.000035123234],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059174915,0.00010752976,0.00013347552,0.0000125232355,0.0005569406,0.000028586435,0.0004928221,0.000029878256,0.000099555546],"category_scores_gemma":[0.00007877975,0.000041138577,0.000058898928,0.000063527856,0.0023545893,0.00020089172,0.00019799257,0.000033542256,0.0000038522508],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036865214,0.000036600122,0.0018287775,0.000009793507,0.000009437726,2.4809719e-8,0.00062724884,0.017824674,0.97832114,0.0000061582073,0.0000046611676,0.0012946541],"study_design_scores_gemma":[0.0004481133,0.00023597121,0.041965604,0.000013468989,0.000047113408,0.0000011345385,0.000044967535,0.006219928,0.9509497,0.000009985809,0.000009116111,0.00005489431],"about_ca_topic_score_codex":0.00013671452,"about_ca_topic_score_gemma":0.000004982222,"teacher_disagreement_score":0.04013683,"about_ca_system_score_codex":0.000072530274,"about_ca_system_score_gemma":0.000011564987,"threshold_uncertainty_score":0.86755824},"labels":[],"label_agreement":null},{"id":"W2613815655","doi":"10.3389/fmicb.2017.00833","title":"Editorial: Petroleum Microbial Biotechnology: Challenges and Prospects","year":2017,"lang":"en","type":"editorial","venue":"Frontiers in Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Thompson Rivers University","funders":"","keywords":"Biotechnology; Industrial biotechnology; Microbial consortium; Biochemical engineering; Biology; Engineering; Microorganism; Bacteria; Genetics","score_opus":0.005562809600396921,"score_gpt":0.20943361991474388,"score_spread":0.20387081031434695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2613815655","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0016974127,0.003639166,0.000009060335,0.0006799279,0.99199814,0.0004444473,0.00043576086,0.0000897469,0.0010063539],"genre_scores_gemma":[0.0005840936,0.02293038,0.0019612098,0.000057432684,0.97206664,0.000020615804,0.0005223891,0.00007458411,0.0017826579],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99704564,0.0001611265,0.00050222396,0.0013102373,0.00018140727,0.00079939346],"domain_scores_gemma":[0.99852717,0.000081081846,0.0005169248,0.00073888025,0.000025953308,0.00010999386],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00065094756,0.0005809077,0.0009299834,0.00023694054,0.00017489886,0.0000652557,0.0010993002,0.004038829,0.00014037127],"category_scores_gemma":[0.00055319606,0.00054789317,0.00010464815,0.00007719105,0.001425507,0.00013452269,0.00085470465,0.0014431381,0.00028591187],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008014379,0.000056081215,0.0003932973,0.000038951115,0.000030979027,0.000012903237,0.000098786164,3.4795406e-7,0.10968332,0.0000028601462,0.88682294,0.0027793997],"study_design_scores_gemma":[0.0010963036,0.00014283157,0.00013801469,0.000064959844,0.000027504211,0.000008753638,0.00003246073,0.0000018464953,0.003216996,0.00014804692,0.99454063,0.0005816281],"about_ca_topic_score_codex":0.00011601372,"about_ca_topic_score_gemma":0.0010374173,"teacher_disagreement_score":0.10771772,"about_ca_system_score_codex":0.00046219147,"about_ca_system_score_gemma":0.00010468489,"threshold_uncertainty_score":0.99969727},"labels":[],"label_agreement":null},{"id":"W2614584415","doi":"10.1101/128660","title":"Vitamin and amino acid auxotrophy in anaerobic consortia operating under methanogenic condition","year":2017,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Uppsala Multidisciplinary Center for Advanced Computational Science; Svenska Forskningsrådet Formas; Vetenskapsrådet; Stiftelsen för Strategisk Forskning","keywords":"Metagenomics; Auxotrophy; Archaea; Metabolic pathway; Bacteria; Alkane; Microbial metabolism; Biology; Fermentation; Thermophile; Biochemistry; Chemistry; Food science; Metabolism; Gene; Genetics; Catalysis","score_opus":0.014160958105277744,"score_gpt":0.2280533475628452,"score_spread":0.21389238945756747,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2614584415","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997866,0.00030391733,0.00016701309,0.00021969971,0.0005350972,0.0005993183,0.0001842326,0.00009557571,0.000029150277],"genre_scores_gemma":[0.99595314,0.00032826888,0.0031607042,0.00035210233,0.00009792996,0.0000394776,0.0000015275308,0.000054518907,0.00001234168],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99743205,0.00018245708,0.00052734884,0.0010314309,0.00032383733,0.0005029012],"domain_scores_gemma":[0.9983703,0.000033950073,0.00046809058,0.0008442748,0.000046521855,0.00023688529],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006170534,0.0004725529,0.00048066908,0.0001451291,0.0002451269,0.00031208814,0.0004968617,0.0005130299,0.00056717114],"category_scores_gemma":[0.00015509613,0.0004900004,0.00008399337,0.00020120945,0.00039623745,0.00029442742,0.0007806523,0.00058361393,0.00027367123],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008380602,0.000057421898,0.030762844,0.00004665137,0.000028171507,0.000027740462,0.000014485629,0.00005997428,0.9687908,0.000044490578,0.00015269386,0.0000063037946],"study_design_scores_gemma":[0.0005525488,0.000031171712,0.50599575,0.00012935542,0.000040946223,3.567972e-8,0.0000042250267,0.00024201382,0.49198383,0.0000028146758,0.0004532716,0.0005640745],"about_ca_topic_score_codex":0.00025349174,"about_ca_topic_score_gemma":0.000104201965,"teacher_disagreement_score":0.47680703,"about_ca_system_score_codex":0.00043101134,"about_ca_system_score_gemma":0.00013078292,"threshold_uncertainty_score":0.99975514},"labels":[],"label_agreement":null},{"id":"W2617564004","doi":"10.1039/c7em00084g","title":"Effects of freeze–thawing cycles on desorption behaviors of PAH-contaminated soil in the presence of a biosurfactant: a case study in western Canada","year":2017,"lang":"en","type":"article","venue":"Environmental Science Processes & Impacts","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Regina","funders":"Natural Sciences and Engineering Research Council of Canada; Petroleum Technology Research Centre","keywords":"Rhamnolipid; Phenanthrene; Environmental chemistry; Environmental science; Desorption; Contamination; Environmental remediation; Soil contamination; Soil water; Environmental engineering; Chemistry; Soil science; Ecology; Geology; Biology; Adsorption","score_opus":0.009423034380139115,"score_gpt":0.24914701486827684,"score_spread":0.23972398048813773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2617564004","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990738,0.000027208996,7.739003e-7,0.000039499482,0.00005175971,0.00072909944,0.000032981057,0.0000029855914,0.00004186165],"genre_scores_gemma":[0.99989766,0.00003277096,0.00001531869,0.000027324788,0.0000034559728,0.000008940823,0.000001390567,0.0000066752154,0.0000064458945],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99787074,0.000102859456,0.00042757398,0.0003672536,0.00087399274,0.00035758733],"domain_scores_gemma":[0.9988245,0.00015447281,0.0005261789,0.00039341394,0.0000067655355,0.00009469685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00087183935,0.00018243557,0.0002451378,0.00008909185,0.00017621771,0.000037590224,0.000865349,0.000046698406,0.000039331087],"category_scores_gemma":[0.0003597878,0.00013097012,0.000024247718,0.00041361898,0.00097004155,0.00059740496,0.0002517799,0.00012677426,0.000002983281],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022932141,0.0005402981,0.5723077,0.00003548037,0.0000014661318,0.00009761847,0.003799081,0.00012941794,0.42244968,8.611205e-8,0.0000016839689,0.0006145728],"study_design_scores_gemma":[0.0004420806,0.00023448309,0.62360424,0.00007919802,0.000007837347,0.000020016605,0.002362444,0.000026375417,0.3731337,0.0000017327062,9.1946856e-7,0.0000870228],"about_ca_topic_score_codex":0.3617101,"about_ca_topic_score_gemma":0.6036845,"teacher_disagreement_score":0.24197434,"about_ca_system_score_codex":0.0003073187,"about_ca_system_score_gemma":0.00014000562,"threshold_uncertainty_score":0.64254034},"labels":[],"label_agreement":null},{"id":"W2625644373","doi":"10.1016/j.ibiod.2017.05.027","title":"Analyses of 16S rRNA and cpn60 gene sequences provide complementary information about potentially useful and harmful oil field microbiota","year":2017,"lang":"en","type":"article","venue":"International Biodeterioration & Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Suncor Energy (Canada); National Research Council Canada; Saskatchewan Research Council (Canada)","funders":"Innovation Saskatchewan","keywords":"Amplicon; Biology; 16S ribosomal RNA; Betaproteobacteria; Genetics; Microbiology; Ralstonia; Gene; Ribosomal RNA; Polymerase chain reaction; Actinobacteria","score_opus":0.02970246280443299,"score_gpt":0.2919349176849892,"score_spread":0.2622324548805562,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2625644373","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930826,0.000030068022,0.0015960451,0.0037131072,0.00035496082,0.00016195764,0.00033432103,0.000023441025,0.000703503],"genre_scores_gemma":[0.99250966,0.00036071966,0.005778962,0.00056782103,0.00004614042,0.0000052306,0.0006020908,0.0000051275483,0.00012425284],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998722,0.000040954714,0.0005127504,0.00026216533,0.00032620132,0.00013590339],"domain_scores_gemma":[0.99892443,0.000024984742,0.0006674414,0.00022163405,0.000093723706,0.00006780285],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023544964,0.00016604745,0.00015379183,0.00010989943,0.00028590657,0.00042084805,0.00029787954,0.00008915609,0.00058992946],"category_scores_gemma":[0.000109232875,0.00014899853,0.00004344447,0.00006385755,0.00024046046,0.001974023,0.00021622378,0.00007004441,0.00004578357],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000066997585,0.000025404046,0.036514938,0.000015043918,0.00002969518,6.4854817e-7,0.0001861966,0.000006186666,0.89902544,0.000026446594,0.0005883021,0.06351468],"study_design_scores_gemma":[0.0009459729,0.00013688712,0.28309825,0.00005193606,0.000046072408,0.00001761237,0.000109457476,0.0018377864,0.6984325,0.000083437284,0.014934036,0.00030607302],"about_ca_topic_score_codex":0.0016747061,"about_ca_topic_score_gemma":0.0005843828,"teacher_disagreement_score":0.2465833,"about_ca_system_score_codex":0.00007082592,"about_ca_system_score_gemma":0.000022757922,"threshold_uncertainty_score":0.6459314},"labels":[],"label_agreement":null},{"id":"W2626114300","doi":"10.1128/genomea.00494-17","title":"Complete Genome Sequence of Acinetobacter calcoaceticus CA16, a Bacterium Capable of Degrading Diesel and Lignin","year":2017,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Western University","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Acinetobacter calcoaceticus; Whole genome sequencing; Biology; Bacteria; Genome; Plasmid; Metabolic pathway; Genetics; Gene; Lignin; Biochemistry; Acinetobacter; Botany","score_opus":0.04081275877433469,"score_gpt":0.25389346133548263,"score_spread":0.21308070256114794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2626114300","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947897,0.000057640496,0.000017052844,0.00010443299,0.00013150241,0.00024078091,0.0009251497,0.000007700704,0.0037260086],"genre_scores_gemma":[0.9980022,0.00013400473,0.0005835261,0.00009379486,0.000021760281,0.000003416993,0.000090533584,0.000009366138,0.0010613988],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998767,0.000027890677,0.0003426039,0.00029437244,0.0002623474,0.00030575672],"domain_scores_gemma":[0.9990577,0.00001087838,0.00037236288,0.00041929007,0.000031841486,0.00010794468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024247663,0.00016043703,0.00026609958,0.00003580688,0.00019807731,0.000045313984,0.00039078188,0.000058186804,0.00061232765],"category_scores_gemma":[0.000027500239,0.00014074756,0.000041175866,0.00007101296,0.00042099025,0.00024334609,0.0003518936,0.0000639775,0.00009772842],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016887294,0.000035456404,0.06921635,0.000027190827,0.000020428095,0.000002589822,0.00052845414,0.000005658034,0.92977864,0.0000050406334,0.000097469536,0.0002658221],"study_design_scores_gemma":[0.0014221868,0.00032853067,0.8570345,0.00005890309,0.000053289205,0.000010180927,0.00016629555,0.00011731937,0.05605246,0.000050264254,0.08420223,0.0005038496],"about_ca_topic_score_codex":0.0009316784,"about_ca_topic_score_gemma":0.00014221833,"teacher_disagreement_score":0.8737262,"about_ca_system_score_codex":0.00009012371,"about_ca_system_score_gemma":0.0000156478,"threshold_uncertainty_score":0.6704559},"labels":[],"label_agreement":null},{"id":"W2678722129","doi":"10.1016/j.scitotenv.2017.06.166","title":"Branched pathways in the degradation of cDCE by cytochrome P450 in Polaromonas sp. JS666","year":2017,"lang":"en","type":"article","venue":"The Science of The Total Environment","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Windsor","funders":"Strategic Environmental Research and Development Program","keywords":"Degradation (telecommunications); Chemistry; Cytochrome P450; Biochemistry; Enzyme; Computer science","score_opus":0.013336318139713782,"score_gpt":0.2109574609534435,"score_spread":0.19762114281372972,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2678722129","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99618274,0.000019321498,0.000003852236,0.0018426899,0.000051100033,0.00036385606,0.0000250397,0.0000016887016,0.0015096908],"genre_scores_gemma":[0.9996049,0.00003086637,0.00007079966,0.000046551857,0.000006259806,0.000004008875,0.0000015044478,0.000003714585,0.00023141317],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99839133,0.000102225145,0.0002786439,0.00024403316,0.0007375061,0.0002462636],"domain_scores_gemma":[0.9987765,0.000037502683,0.00031019744,0.0008396,0.000002623888,0.000033555556],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016889605,0.00010898378,0.00012212935,0.000023150982,0.00028056142,0.000036850033,0.0017817894,0.00003733679,0.00032975158],"category_scores_gemma":[0.000110426605,0.000054084307,0.000048095964,0.0002246103,0.0021225265,0.00026502102,0.00052908243,0.00012885398,0.000075793636],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000102070235,0.00009943462,0.0024493614,0.0000016010052,0.0000010403678,3.105192e-7,0.00069306744,0.0008201345,0.99483305,0.000031780008,0.000059218106,0.0010007782],"study_design_scores_gemma":[0.00023352387,0.000032922406,0.7321774,0.000011277629,0.000003767501,0.0000025509712,0.00016234852,0.00044415402,0.2666737,0.00014215976,0.00004814533,0.00006807359],"about_ca_topic_score_codex":0.0007837327,"about_ca_topic_score_gemma":0.000053809683,"teacher_disagreement_score":0.729728,"about_ca_system_score_codex":0.00016201826,"about_ca_system_score_gemma":0.00002092315,"threshold_uncertainty_score":0.7820537},"labels":[],"label_agreement":null},{"id":"W2703216501","doi":"10.1007/978-3-319-57057-0_28","title":"Bioremediation of Petroleum Hydrocarbon Spills in Cold Terrestrial Environments","year":2017,"lang":"en","type":"book-chapter","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Bioremediation; Environmental science; Environmental chemistry; Soil water; Petroleum; Biodegradation; Hydrocarbon; Energy source; Contamination; Environmental engineering; Ecology; Chemistry; Soil science; Biology","score_opus":0.012954048488217788,"score_gpt":0.20782370651877863,"score_spread":0.19486965803056083,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2703216501","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.051447958,0.000032461732,0.000009963654,0.00013403692,0.0006807655,0.00058413733,0.00008952303,0.000019845727,0.94700134],"genre_scores_gemma":[0.6599122,0.00034401283,0.000091351576,0.000084844745,0.00012393197,0.0000026400016,0.00008652705,0.000031159085,0.3393233],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99829006,0.00001658168,0.0005258464,0.00042688413,0.0005156485,0.00022499019],"domain_scores_gemma":[0.9988228,0.000022743388,0.00059780315,0.00045989096,0.0000014637449,0.00009528025],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00022662131,0.0002866393,0.00036862877,0.00009829159,0.000039345017,0.000019313882,0.0003841965,0.000405371,0.006049118],"category_scores_gemma":[0.000027690527,0.0002592668,0.00011397093,0.00001219334,0.00026132475,0.00011707168,0.00019920546,0.00020492623,0.0013264534],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020117327,0.00024350049,0.03032925,0.000028414457,0.000063729676,0.000041003437,0.00014070426,0.00009865442,0.94901544,0.00104378,0.011013521,0.007780811],"study_design_scores_gemma":[0.0037893257,0.00038729294,0.02943998,0.00023245694,0.00009484317,0.0000029400628,0.000008020126,0.000359138,0.119913094,0.0012472555,0.84312195,0.0014037102],"about_ca_topic_score_codex":0.0002732929,"about_ca_topic_score_gemma":0.00076818955,"teacher_disagreement_score":0.83210844,"about_ca_system_score_codex":0.00026639897,"about_ca_system_score_gemma":0.00001978927,"threshold_uncertainty_score":0.99998593},"labels":[],"label_agreement":null},{"id":"W2728376748","doi":"10.3389/fmicb.2017.01223","title":"Biphenyl Modulates the Expression and Function of Respiratory Oxidases in the Polychlorinated-Biphenyls Degrader Pseudomonas pseudoalcaligenes KF707","year":2017,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Università di Bologna","keywords":"Biphenyl; Biochemistry; Pseudomonas; Oxidase test; Chemistry; Metabolite; Enzyme; Bacteria; Microbiology; Biology; Organic chemistry; Genetics","score_opus":0.015622003670465371,"score_gpt":0.23201380079416287,"score_spread":0.2163917971236975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2728376748","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99761605,0.0006269315,0.00011170912,0.000538738,0.0005607271,0.00027621377,0.000020663616,0.0000074772506,0.00024148567],"genre_scores_gemma":[0.99877495,0.00016090587,0.00044955604,0.0004884969,0.000030000794,0.000008834207,0.000007781643,0.0000074461204,0.00007201119],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99884444,0.00023768081,0.0002941996,0.00029830707,0.00006956083,0.000255796],"domain_scores_gemma":[0.999268,0.000057052675,0.00021486013,0.00042613607,0.000007592858,0.000026335805],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058236014,0.00014901298,0.0001959648,0.00006324582,0.00023267495,0.000031813193,0.00052726845,0.00016377008,0.000095019896],"category_scores_gemma":[0.000079311445,0.000084469604,0.000041379066,0.00010617768,0.0008502606,0.0001326118,0.00019145981,0.00016285652,0.000012465505],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005625883,0.00004002392,0.31760472,0.0000037184302,0.0000041091,0.0000017655653,0.00026294874,0.000010697074,0.67500114,0.0000091440315,0.005118686,0.0018867903],"study_design_scores_gemma":[0.0008179223,0.00010014091,0.66193783,0.000030940664,0.000011703346,0.000008792203,0.00064545934,0.000037260943,0.3206587,0.0005099138,0.015056256,0.00018503504],"about_ca_topic_score_codex":0.00026001054,"about_ca_topic_score_gemma":0.00033130197,"teacher_disagreement_score":0.3543424,"about_ca_system_score_codex":0.00004332138,"about_ca_system_score_gemma":0.000009985888,"threshold_uncertainty_score":0.34445703},"labels":[],"label_agreement":null},{"id":"W2738836311","doi":"10.82308/45579","title":"Biopile bioremediation of petroleum hydrocarbon contaminated soils from a sub-Arctic site","year":2010,"lang":"en","type":"article","venue":"eScholarship@McGill (McGill)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Bioremediation; Petroleum; Environmental science; Soil water; Hydrocarbon; Contamination; Soil contamination; Biostimulation; Environmental remediation; Arctic; Petroleum engineering; Environmental chemistry; Waste management; Environmental engineering; Geology; Soil science; Chemistry; Ecology; Engineering; Oceanography","score_opus":0.006548703226485436,"score_gpt":0.18848724561733285,"score_spread":0.18193854239084742,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2738836311","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99239624,0.00001352647,3.547352e-7,0.000050798866,0.00073929294,0.0003246659,0.001077006,0.00012387711,0.0052742343],"genre_scores_gemma":[0.9987391,0.000044351156,0.00041064795,0.00030054818,0.000037265265,0.000011105981,0.0002331133,0.000045079454,0.00017873723],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972701,0.0001756341,0.0006712284,0.0007025128,0.0006605592,0.00051996217],"domain_scores_gemma":[0.99845344,0.00015155425,0.00045246526,0.00056154287,0.000062506006,0.00031850633],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00063131144,0.00036117184,0.00038354614,0.00012994769,0.00029161072,0.000036156554,0.00045059752,0.00038358718,0.0025294402],"category_scores_gemma":[0.0004352814,0.00034603415,0.00016570749,0.00051259785,0.0002566547,0.00056270574,0.00025468002,0.00064548105,0.0017457084],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000581154,0.00017025198,0.015174376,0.000011811327,0.000024632684,0.00000817052,0.000008503426,0.000011577285,0.97428316,0.00030898346,0.000008658648,0.009931746],"study_design_scores_gemma":[0.0010751633,0.00011794045,0.0833935,0.000028413973,0.00005234104,0.0000054939396,0.000019849344,0.00033016418,0.90602016,0.0009900995,0.00753178,0.0004350975],"about_ca_topic_score_codex":0.0025374952,"about_ca_topic_score_gemma":0.0053162845,"teacher_disagreement_score":0.06826302,"about_ca_system_score_codex":0.00029788128,"about_ca_system_score_gemma":0.000013687463,"threshold_uncertainty_score":0.99989915},"labels":[],"label_agreement":null},{"id":"W2739998841","doi":"10.1111/jam.13549","title":"Response of microbial community and catabolic genes to simulated petroleum hydrocarbon spills in soils/sediments from different geographic locations","year":2017,"lang":"en","type":"article","venue":"Journal of Applied Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Science Foundation of Tianjin City; National Natural Science Foundation of China","keywords":"AlkB; Microcosm; Actinobacteria; Environmental chemistry; Bioremediation; Soil water; Microbial population biology; Temperature gradient gel electrophoresis; Hydrocarbon; Proteobacteria; Relative species abundance; Soil microbiology; Chemistry; Environmental science; Abundance (ecology); Ecology; Biology; Bacteria; Contamination; 16S ribosomal RNA; Gene; Organic chemistry","score_opus":0.009916386713747982,"score_gpt":0.23149849533720623,"score_spread":0.22158210862345826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2739998841","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99907225,0.00004989572,0.0000128585225,0.00036037603,0.00017372689,0.0001671879,0.000097966324,0.0000038994735,0.000061814666],"genre_scores_gemma":[0.9993458,0.000078792276,0.00023106032,0.0002784945,0.000024906192,8.11164e-7,0.000020754684,0.0000091858,0.000010206206],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99878895,0.00018673709,0.0005561878,0.00016914144,0.00007193283,0.0002270392],"domain_scores_gemma":[0.9987708,0.00012275932,0.00061267416,0.00035921347,0.000019456567,0.00011513032],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059345027,0.00016604719,0.00039144128,0.0001586741,0.00017479248,0.00002682384,0.0005319649,0.00014946253,0.00010910451],"category_scores_gemma":[0.00004291317,0.00013666468,0.000059007976,0.000069313755,0.00034166288,0.00006585321,0.00034796508,0.00029195982,0.000022805381],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000980056,0.00019789218,0.05308886,0.000003252672,0.000027620172,0.0000023733417,0.00038060363,0.00025218964,0.9442993,0.0000016767926,0.0001286126,0.00063758873],"study_design_scores_gemma":[0.0016878748,0.00017746656,0.5503662,0.000027265482,0.000025534866,0.000011443496,0.000104106395,0.000023576411,0.44624308,0.00005367972,0.0011347373,0.00014499328],"about_ca_topic_score_codex":0.0010580518,"about_ca_topic_score_gemma":0.0012391015,"teacher_disagreement_score":0.4980562,"about_ca_system_score_codex":0.000084068255,"about_ca_system_score_gemma":0.000020777592,"threshold_uncertainty_score":0.55730236},"labels":[],"label_agreement":null},{"id":"W2740257899","doi":"10.1016/j.ab.2017.07.027","title":"Neutral Red versus MTT assay of cell viability in the presence of copper compounds","year":2017,"lang":"en","type":"article","venue":"Analytical Biochemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":75,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Université du Québec à Montréal","keywords":"Formazan; Copper; Neutral red; Cytotoxicity; MTT assay; Chemistry; Bromide; Lactate dehydrogenase; Viability assay; Enzyme; Biochemistry; In vitro; Inorganic chemistry; Organic chemistry","score_opus":0.018630245031015277,"score_gpt":0.26463539244969236,"score_spread":0.24600514741867707,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2740257899","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96458685,0.0000034095926,0.0000013561337,0.0005639561,0.000037853286,0.00006205203,0.000020067686,0.0000025559361,0.034721915],"genre_scores_gemma":[0.99971056,0.0000051694055,0.000070561284,0.00003622368,0.000012755502,6.201206e-7,0.0000062328345,0.000002058424,0.00015582322],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999228,0.000040584684,0.00022020159,0.00018817821,0.00017991166,0.00014310514],"domain_scores_gemma":[0.9991479,0.00013124727,0.00012936634,0.00053060707,0.000011870312,0.000048998256],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043551569,0.00007666614,0.00012982513,0.000005732754,0.00004806469,0.00001637551,0.00056424446,0.000085561776,0.00039264144],"category_scores_gemma":[0.00030644482,0.000053681844,0.000064650536,0.000072841554,0.00066298305,0.00004787217,0.00013935377,0.000107989596,0.000021018908],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006450681,0.00014974475,0.1427313,0.000018745128,0.000003439992,0.0000013188306,0.00003736834,0.0000040169416,0.8545454,0.000010132547,0.0023805194,0.00005349061],"study_design_scores_gemma":[0.000401845,0.000028596432,0.14061092,0.0000063553016,0.000010804018,3.62299e-7,0.000045447487,0.00032960222,0.8583108,0.000033093515,0.00015567499,0.00006650488],"about_ca_topic_score_codex":0.00018015687,"about_ca_topic_score_gemma":0.000050881812,"teacher_disagreement_score":0.03512372,"about_ca_system_score_codex":0.0000349947,"about_ca_system_score_gemma":0.000015094994,"threshold_uncertainty_score":0.42991483},"labels":[],"label_agreement":null},{"id":"W2740575293","doi":"10.1002/jctb.5385","title":"Selective biostimulation of cold‐ and salt‐tolerant hydrocarbon‐degrading <i>Dietzia maris</i> in petroleum‐contaminated sub‐Arctic soils with high salinity","year":2017,"lang":"en","type":"article","venue":"Journal of Chemical Technology & Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University of Saskatchewan; Geological Survey of Canada","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Microcosm; Biostimulation; Halotolerance; Salinity; Hydrocarbon; Bioremediation; Environmental chemistry; Hexadecane; Biodegradation; Soil microbiology; Soil salinity; Soil water; Chemistry; Bacteria; Biology; Ecology; Organic chemistry","score_opus":0.004857810876664272,"score_gpt":0.20754706677604767,"score_spread":0.2026892558993834,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2740575293","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947385,0.00008395819,0.00007655778,0.0047731753,0.00006733877,0.00015868344,0.000006040851,0.000045814984,0.000049898867],"genre_scores_gemma":[0.99812,0.00015968017,0.0016140334,0.00006942908,0.000013427621,0.0000021058966,0.0000016573193,0.000014405548,0.0000052366418],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984628,0.000030697294,0.0006298973,0.00031885738,0.0002164555,0.00034132195],"domain_scores_gemma":[0.99840945,0.000061125844,0.0010511959,0.00034849747,0.000058961537,0.00007076283],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036527473,0.00021529781,0.00057229534,0.00036288842,0.000087217166,0.000017603892,0.00055331545,0.0009121474,0.000020091762],"category_scores_gemma":[0.00037712307,0.00017285463,0.000054297394,0.00043403672,0.0015560408,0.00021495274,0.00027098265,0.0008768342,0.000005169208],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018486974,0.000113244314,0.14971265,0.000012325983,0.000033702385,0.000030809126,0.000017887665,0.000014393493,0.847083,0.00021973958,0.000023805078,0.0025536173],"study_design_scores_gemma":[0.0017801508,0.0004855032,0.04323314,0.00009673287,0.000040487714,0.00014807547,0.000032489916,0.00035032563,0.952259,0.0013176864,0.000082321094,0.00017406206],"about_ca_topic_score_codex":0.00013121989,"about_ca_topic_score_gemma":0.000114028844,"teacher_disagreement_score":0.1064795,"about_ca_system_score_codex":0.00024013857,"about_ca_system_score_gemma":0.000035588055,"threshold_uncertainty_score":0.7048807},"labels":[],"label_agreement":null},{"id":"W2742732015","doi":"10.1101/175182","title":"Chlorinated electron acceptor availability selects for specific <i>Dehalococcoides</i> populations in dechlorinating enrichment cultures and in groundwater","year":2017,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Strategic Environmental Research and Development Program; Natural Sciences and Engineering Research Council of Canada; European Commission; Government of Ontario; Sustainable Development Technology Canada; Genome Canada; Ontario Genomics; LOEWE Zentrum AdRIA; Ontario Genomics Institute; U.S. Department of Defense","keywords":"Dehalococcoides; Dehalogenase; Gene; Biology; Enrichment culture; Metagenomics; Genome; Population; Vinyl chloride; Microbiology; Genetics; Chemistry; Bacteria","score_opus":0.02368511502854987,"score_gpt":0.25509235446888134,"score_spread":0.23140723944033148,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2742732015","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970406,0.00021847947,0.000059504808,0.00023025511,0.00053862174,0.0017152443,0.00008319915,0.00009227728,0.000021808324],"genre_scores_gemma":[0.9965086,0.0002482879,0.0027490894,0.000073908384,0.00012343086,0.00022676864,0.0000027500073,0.00005054106,0.000016598482],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9970438,0.00010523415,0.0006555372,0.0011912349,0.00030366113,0.0007005257],"domain_scores_gemma":[0.99856913,0.000049030867,0.0004236337,0.00071147765,0.00007219771,0.00017451351],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009673425,0.0004892635,0.00048373788,0.00016839098,0.00023808214,0.0003095579,0.0005133806,0.00045371059,0.00014911377],"category_scores_gemma":[0.00022910818,0.00048596048,0.00008364991,0.00032554843,0.0001574811,0.00033062728,0.00052680576,0.00058441155,0.00004382916],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060378647,0.00023762615,0.27146947,0.00009335454,0.000010161279,0.0000063645325,0.0000337465,0.000061965606,0.72759974,0.000042767853,0.00037659262,0.000007819962],"study_design_scores_gemma":[0.0007242548,0.00004841118,0.74808997,0.000087917615,0.000014242592,1.4726463e-8,0.000002830968,0.00017862055,0.24614923,0.0000134210995,0.004140952,0.0005501224],"about_ca_topic_score_codex":0.00046773578,"about_ca_topic_score_gemma":0.0007040747,"teacher_disagreement_score":0.48145053,"about_ca_system_score_codex":0.00114662,"about_ca_system_score_gemma":0.00008940418,"threshold_uncertainty_score":0.9997592},"labels":[],"label_agreement":null},{"id":"W2744725584","doi":"10.1038/ismej.2017.129","title":"Chemical dispersants enhance the activity of oil- and gas condensate-degrading marine bacteria","year":2017,"lang":"en","type":"article","venue":"The ISME Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":177,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Armand Frappier Museum; Fisheries and Oceans Canada; Institut National de la Recherche Scientifique; National Research Council Canada","funders":"Natural Resources Canada; Environmental Studies Research Funds; Dalhousie University; Compute Canada; Suncor Energy Incorporated; McGill University","keywords":"Dispersant; Biodegradation; Context (archaeology); AlkB; Environmental chemistry; Hopanoids; Metagenomics; Hydrocarbon; Residual oil; Petroleum; Environmental science; Microorganism; Biology; Bacteria; Chemistry; Ecology; Dispersion (optics); Organic chemistry; Source rock","score_opus":0.012555341922173694,"score_gpt":0.24401456462429133,"score_spread":0.23145922270211763,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2744725584","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930266,0.000006347412,0.0000048286297,0.0042290734,0.00014491242,0.000022040454,0.000003830677,0.0000028646314,0.0025594712],"genre_scores_gemma":[0.9989441,0.00022146452,0.000081164464,0.00008783423,0.00007345881,2.3127613e-7,2.169812e-7,0.0000039446545,0.00058756565],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999446,0.000047824262,0.00011710997,0.00008643814,0.00016381517,0.00013882027],"domain_scores_gemma":[0.9994403,0.00003862598,0.00024509945,0.00021121558,0.0000063297357,0.000058413443],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00043133608,0.000072878094,0.00009485606,0.0000050876183,0.0003794011,0.000099874196,0.0003728737,0.000031759053,0.0016862033],"category_scores_gemma":[0.00007330378,0.000035304238,0.000034508168,0.000019776986,0.0004202566,0.00014985554,0.000263039,0.00018568759,0.00003987246],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026733416,0.00001359912,0.010830387,0.0000014942357,0.000007449038,0.0000011710738,0.00018503644,3.0954678e-7,0.95000976,0.0000035761668,0.000372591,0.038547877],"study_design_scores_gemma":[0.00025962424,0.000016170787,0.3483283,0.000015458776,0.000016057074,0.00008045569,0.000036934605,0.00013951483,0.64965427,0.0001610848,0.0012093569,0.000082795515],"about_ca_topic_score_codex":0.000091837974,"about_ca_topic_score_gemma":0.000053634223,"teacher_disagreement_score":0.3374979,"about_ca_system_score_codex":0.000031814467,"about_ca_system_score_gemma":0.0000068858276,"threshold_uncertainty_score":0.9992264},"labels":[],"label_agreement":null},{"id":"W2748053368","doi":"10.2175/106143017x14839994523622","title":"Biotransformation of RDX and HMX by Anaerobic Granular Sludge with Enriched Sulfate and Nitrate","year":2017,"lang":"en","type":"article","venue":"Water Environment Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Nitrate; Biotransformation; Sulfate; Chemistry; Environmental chemistry; Bioreactor; Biodegradation; Trinitrotoluene; Explosive material","score_opus":0.020908558953545882,"score_gpt":0.2560631639125136,"score_spread":0.23515460495896773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2748053368","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978018,0.00003841239,0.000040281404,0.0008579707,0.0000081248545,0.0002985514,0.000020321935,0.0000055912496,0.0009289427],"genre_scores_gemma":[0.99831975,0.0008534747,0.00017556913,0.000022488734,0.000004956118,0.0000055814135,0.00003029445,0.000008709846,0.0005791661],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987375,0.000083010265,0.00015779301,0.0002721058,0.00042401624,0.00032558342],"domain_scores_gemma":[0.99952424,0.000011953937,0.000048613416,0.0002898566,0.000004644883,0.000120716984],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007182541,0.00011335487,0.00011990096,0.000038525035,0.00033410994,0.00008733471,0.00018798008,0.000067168134,0.0007112638],"category_scores_gemma":[0.000005100214,0.00007086656,0.000013539162,0.000029546685,0.00090057816,0.00030014315,0.00019724962,0.00013211911,0.00015142471],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049909784,0.000041769395,0.0683261,0.000015550128,0.0000061043515,0.0000021612682,0.00036672328,0.0000026197495,0.9294475,0.0000064207743,0.00022718884,0.0015079969],"study_design_scores_gemma":[0.0007786148,0.00020014489,0.23598897,0.000007753079,0.0000073239703,0.0000030904373,0.000051594267,0.00006032904,0.75605214,0.000076629505,0.0066361357,0.00013725243],"about_ca_topic_score_codex":0.00037857608,"about_ca_topic_score_gemma":0.000048374448,"teacher_disagreement_score":0.1733953,"about_ca_system_score_codex":0.00004630072,"about_ca_system_score_gemma":0.000002668962,"threshold_uncertainty_score":0.778784},"labels":[],"label_agreement":null},{"id":"W2750592176","doi":"10.1016/j.scitotenv.2017.08.227","title":"Enhanced bioremediation of nutrient-amended, petroleum hydrocarbon-contaminated soils over a cold-climate winter: The rate and extent of hydrocarbon biodegradation and microbial response in a pilot-scale biopile subjected to natural seasonal freeze-thaw temperatures","year":2017,"lang":"en","type":"article","venue":"The Science of The Total Environment","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":76,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Foundation for Innovation","keywords":"Bioremediation; Biodegradation; Hydrocarbon; Environmental science; Petroleum; Biostimulation; Nutrient; Environmental chemistry; Contamination; Soil water; Total petroleum hydrocarbon; Soil contamination; Waste management; Environmental engineering; Ecology; Soil science; Chemistry; Biology; Engineering","score_opus":0.00492022505927307,"score_gpt":0.20208206809802956,"score_spread":0.1971618430387565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2750592176","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980309,0.000053032814,0.0000035590845,0.0009976,0.00016192548,0.0006203025,0.00009407396,0.0000048489437,0.000033778317],"genre_scores_gemma":[0.99970365,0.00009312294,0.000050634968,0.000040889117,0.000010517186,0.000009883999,0.0000031225231,0.000007180885,0.000081016035],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982366,0.00019002962,0.00037426857,0.00037559067,0.0005235042,0.00030002845],"domain_scores_gemma":[0.998815,0.000080337384,0.00047695858,0.00054271775,0.000011024106,0.00007393657],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014806979,0.00018171179,0.00021462346,0.00005938801,0.00032542006,0.00005726743,0.0006431824,0.000043880696,0.00004037487],"category_scores_gemma":[0.00012716654,0.000101583304,0.000051759984,0.0002226246,0.0022030373,0.00022035229,0.0007356552,0.00013809811,0.000004147772],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00079749915,0.00010290293,0.0031314704,0.000007598598,0.000006685603,3.026879e-7,0.00072058226,0.00022722576,0.9948761,0.000009885693,0.000013859765,0.00010588255],"study_design_scores_gemma":[0.00053419557,0.00018491439,0.4134045,0.00003681878,0.000012163139,0.000002121838,0.000106921354,0.0012094247,0.5844165,0.0000131212,0.0000033176573,0.000075970456],"about_ca_topic_score_codex":0.00038783712,"about_ca_topic_score_gemma":0.00013744745,"teacher_disagreement_score":0.41045958,"about_ca_system_score_codex":0.00014524786,"about_ca_system_score_gemma":0.000031030064,"threshold_uncertainty_score":0.8117183},"labels":[],"label_agreement":null},{"id":"W2753111085","doi":"10.1039/c7ra07411e","title":"A novel bioemulsifier produced by Exiguobacterium sp. strain N4-1P isolated from petroleum hydrocarbon contaminated coastal sediment","year":2017,"lang":"en","type":"article","venue":"RSC Advances","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada; Memorial University of Newfoundland","keywords":"Hydrocarbon; Sediment; Strain (injury); Petroleum; Environmental chemistry; Bacterial strain; Chemistry; Contamination; Environmental science; Geology; Bacteria; Organic chemistry; Biology; Ecology","score_opus":0.010206196492012192,"score_gpt":0.23136150040075057,"score_spread":0.2211553039087384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2753111085","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953698,0.0000915157,0.0003202562,0.00072828896,0.00057569845,0.00029782366,0.0011079044,0.00007687885,0.0014318622],"genre_scores_gemma":[0.997732,0.00008394018,0.0005982154,0.00025160357,0.0000809602,0.0000073379874,0.00024151351,0.000020240659,0.0009842133],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99834675,0.00003331768,0.00029912952,0.00058867096,0.0003327744,0.00039936072],"domain_scores_gemma":[0.9989887,0.000021597,0.00034013038,0.00047296332,0.000013832836,0.00016278334],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014292555,0.0002638852,0.00024674155,0.000020471121,0.00028386718,0.00012928653,0.00045585842,0.00011240143,0.0013240835],"category_scores_gemma":[0.00005453175,0.00022586396,0.000057901223,0.000064215536,0.0002832514,0.00055905676,0.00020567623,0.00015000434,0.00034062998],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008178296,0.00015415486,0.02016696,0.0000038072003,0.000017703669,0.000005131898,0.00011126566,0.000008381728,0.9751117,0.0000018716004,0.0008274232,0.0035097876],"study_design_scores_gemma":[0.0031003146,0.00035774615,0.17222159,0.0000600754,0.000039059043,0.0000054389848,0.00019084213,0.0032559105,0.7335506,0.000051753657,0.08625486,0.00091183593],"about_ca_topic_score_codex":0.0008885349,"about_ca_topic_score_gemma":0.0007050107,"teacher_disagreement_score":0.24156114,"about_ca_system_score_codex":0.000099909026,"about_ca_system_score_gemma":0.000014243711,"threshold_uncertainty_score":0.99958885},"labels":[],"label_agreement":null},{"id":"W2755429939","doi":"10.1007/s00449-017-1836-5","title":"Comparative proteomic analysis and characterization of benzo(a)pyrene removal by Microbacterium sp. strain M.CSW3 under denitrifying conditions","year":2017,"lang":"en","type":"article","venue":"Bioprocess and Biosystems Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Fundamental Research Funds for the Central Universities; National Natural Science Foundation of China","keywords":"Microbacterium; Denitrifying bacteria; Chemistry; Strain (injury); Microbiology; Industrial and production engineering; Biochemistry; Biology; Organic chemistry; Denitrification; Engineering; Gene","score_opus":0.010936415198107487,"score_gpt":0.22544685845557008,"score_spread":0.2145104432574626,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2755429939","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984011,0.000042546406,0.00066846487,0.000063309184,0.00006149556,0.00022024127,0.00048647885,0.000020821526,0.00003554901],"genre_scores_gemma":[0.9994692,0.00004683306,0.0002284782,0.000010744637,0.000024563467,0.000004964481,0.00014250245,0.0000071615273,0.00006553123],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992419,0.000011096104,0.00024443064,0.00024333713,0.00010703344,0.0001521897],"domain_scores_gemma":[0.9995157,0.0000069328657,0.00023895792,0.00014031034,0.000018173567,0.000079908525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001170437,0.00014623725,0.00026588354,0.00006941594,0.00017488652,0.00012124509,0.00011757163,0.00008359315,0.000055391807],"category_scores_gemma":[0.000007153965,0.00012857752,0.000034106026,0.00015329284,0.000094612486,0.00023703609,0.000070195136,0.0000549539,0.0000038312537],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000054502216,0.000015006352,0.019693494,0.00007133596,0.00006030596,7.839753e-7,0.00012286675,0.000013896801,0.97988826,0.0000076108113,0.0000066403472,0.0001143609],"study_design_scores_gemma":[0.00023721752,0.00002256666,0.4540535,0.000050276467,0.000070791524,0.000009947444,0.00005235983,0.0018874032,0.54328775,0.0000014100563,0.00014481081,0.0001819469],"about_ca_topic_score_codex":0.00016554732,"about_ca_topic_score_gemma":0.000057736546,"teacher_disagreement_score":0.43660048,"about_ca_system_score_codex":0.000029290244,"about_ca_system_score_gemma":0.0000057144593,"threshold_uncertainty_score":0.5243239},"labels":[],"label_agreement":null},{"id":"W2760154452","doi":"10.1680/jenes.17.00018","title":"Briefing: A study on biological remediation and ecotoxicity evaluation of BaP-contaminated soil","year":2017,"lang":"en","type":"article","venue":"Journal of Environmental Engineering and Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Hankuk University of Foreign Studies","keywords":"Ecotoxicity; Environmental remediation; Daphnia magna; Environmental chemistry; Biodegradation; Chemistry; Soil contamination; Pyrene; Bioremediation; Contamination; Soil water; Environmental science; Toxicity; Organic chemistry; Biology; Ecology","score_opus":0.02457852176909415,"score_gpt":0.24717859083002872,"score_spread":0.22260006906093457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2760154452","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995666,0.00002089108,0.000018242392,0.00005140579,0.00011709033,0.000109846704,0.000003012765,0.000002225876,0.00011065066],"genre_scores_gemma":[0.99977714,0.00006499427,0.00011913178,0.000014448881,0.000016263244,5.0077676e-7,2.222319e-7,0.0000023444104,0.000004933396],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989954,0.000026342545,0.000209527,0.00014598099,0.00051823055,0.00010447526],"domain_scores_gemma":[0.99950635,0.000023521447,0.00025958216,0.00011412962,0.000008171424,0.000088223926],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017070307,0.00007555799,0.000115533716,0.000048723075,0.00015112832,0.00004131875,0.0001691226,0.000030695144,0.0000690918],"category_scores_gemma":[0.0002919462,0.000056978246,0.00001778478,0.000042998843,0.00032558411,0.000271597,0.0001042749,0.000084071304,0.0000027636454],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013696798,0.00011326614,0.13817973,0.0000010600128,0.000003844156,0.0000016598425,0.00028326426,0.00075614266,0.8547421,0.0000019198283,0.0000051609954,0.005898122],"study_design_scores_gemma":[0.000545757,0.00037196837,0.95489234,0.000011118055,0.000010255994,0.000008818246,0.00011749569,0.007141482,0.036796257,0.00000722555,0.00003359477,0.00006371013],"about_ca_topic_score_codex":0.000010940256,"about_ca_topic_score_gemma":0.000004136616,"teacher_disagreement_score":0.81794584,"about_ca_system_score_codex":0.00010242546,"about_ca_system_score_gemma":0.000009497224,"threshold_uncertainty_score":0.23235054},"labels":[],"label_agreement":null},{"id":"W2760707974","doi":"10.3389/fmicb.2017.01845","title":"Benzene and Naphthalene Degrading Bacterial Communities in an Oil Sands Tailings Pond","year":2017,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta; University of Calgary","funders":"Genome Alberta; Genome British Columbia; Natural Sciences and Engineering Research Council of Canada; Syncrude; Government of Alberta; Joint Genome Institute; Genome Canada","keywords":"Naphthalene; Metagenomics; Environmental chemistry; Polycyclic aromatic hydrocarbon; Tailings; Benzene; Bioremediation; Microbial population biology; Stable-isotope probing; 16S ribosomal RNA; Aromatic hydrocarbon; Oil sands; Chemistry; Hydrocarbon; Biology; Organic chemistry; Gene; Microorganism; Bacteria; Ecology; Contamination; Biochemistry; Genetics; Materials science","score_opus":0.013457896929992729,"score_gpt":0.23177534394701746,"score_spread":0.21831744701702474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2760707974","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980766,0.000095352174,0.000008880282,0.00016427346,0.0007446804,0.000059102123,0.00004083372,0.000009850752,0.00080040714],"genre_scores_gemma":[0.9961012,0.00025935264,0.0031427173,0.00015493363,0.000033398745,0.0000018688938,0.00009812576,0.0000089077,0.00019952167],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99908274,0.00012381581,0.0002239992,0.00023305841,0.000028913077,0.0003074797],"domain_scores_gemma":[0.99950284,0.000016483145,0.000115511706,0.0003032098,0.0000043198015,0.000057659243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035586153,0.000138805,0.00023017988,0.000082368846,0.00017570287,0.00006496939,0.0004127488,0.00017592384,0.0006005756],"category_scores_gemma":[0.000029314477,0.00013081558,0.000020718275,0.00004649822,0.0005452315,0.0002498233,0.00025028628,0.00016810461,0.000019495032],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004592982,0.00002494768,0.43600208,0.0000031710476,0.0000022759452,0.000004466703,0.00053066167,0.000001271938,0.55871487,0.0000018822324,0.0009475976,0.003720856],"study_design_scores_gemma":[0.0065755285,0.00044538872,0.73062426,0.00014292295,0.000022156222,0.00012653705,0.0031367468,0.00048084895,0.17694406,0.00037997778,0.07978737,0.0013342121],"about_ca_topic_score_codex":0.0009232249,"about_ca_topic_score_gemma":0.0066968617,"teacher_disagreement_score":0.3817708,"about_ca_system_score_codex":0.000102205886,"about_ca_system_score_gemma":0.000008732908,"threshold_uncertainty_score":0.6575882},"labels":[],"label_agreement":null},{"id":"W2761336281","doi":"10.1016/j.bjm.2017.04.014","title":"Anaerobic biodegradation of benzo(a)pyrene by a novel Cellulosimicrobium cellulans CWS2 isolated from polycyclic aromatic hydrocarbon-contaminated soil","year":2017,"lang":"en","type":"article","venue":"Brazilian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland; Science North","funders":"Fundamental Research Funds for the Central Universities; National Natural Science Foundation of China","keywords":"Biodegradation; Pyrene; Chemistry; Phenanthrene; Polycyclic aromatic hydrocarbon; Environmental chemistry; Benzo(a)pyrene; Bioremediation; Environmental remediation; Hydrocarbon; Nuclear chemistry; Contamination; Organic chemistry","score_opus":0.007743802153735702,"score_gpt":0.20708679875765992,"score_spread":0.1993429966039242,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2761336281","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997119,0.00022288963,0.0005567161,0.00071630755,0.00064668286,0.00017808753,0.0003476277,0.0000147698975,0.00019792777],"genre_scores_gemma":[0.99800247,0.00009690929,0.001007173,0.00024344127,0.000059637805,6.552565e-7,0.00022793982,0.000025286712,0.00033646275],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978644,0.00013669863,0.0010815066,0.00036403726,0.0001334494,0.00041990913],"domain_scores_gemma":[0.9971063,0.000069025824,0.002104803,0.0005145664,0.000025780653,0.00017950646],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00038562674,0.00031881404,0.0006170806,0.00012344553,0.00021518747,0.00005739751,0.0010281403,0.00033134565,0.00077742094],"category_scores_gemma":[0.00009366585,0.00027147192,0.00021257259,0.00014826989,0.000584806,0.00029794435,0.00017052342,0.00030857945,0.00015499392],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014099145,0.00025540066,0.0084264595,0.0000063173343,0.00009060875,0.000010648109,0.00021106751,0.0000082146535,0.9829785,5.930625e-7,0.00677733,0.0010938286],"study_design_scores_gemma":[0.002270219,0.00040966982,0.017591257,0.00008459869,0.00009436116,0.00010608555,0.000062662395,0.00017991078,0.97599864,0.00003324994,0.0028485341,0.00032079514],"about_ca_topic_score_codex":0.00075110485,"about_ca_topic_score_gemma":0.0005657202,"teacher_disagreement_score":0.009164798,"about_ca_system_score_codex":0.00014370107,"about_ca_system_score_gemma":0.000056243396,"threshold_uncertainty_score":0.9999738},"labels":[],"label_agreement":null},{"id":"W2761453615","doi":"10.1039/c7em00242d","title":"Indigenous<sup>14</sup>C-phenanthrene biodegradation in “pristine” woodland and grassland soils from Norway and the United Kingdom","year":2017,"lang":"en","type":"article","venue":"Environmental Science Processes & Impacts","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Environment and Climate Change Canada","funders":"","keywords":"Woodland; Grassland; Indigenous; Soil water; Environmental science; Phenanthrene; Forestry; Geography; Agroforestry; Ecology; Environmental chemistry; Soil science; Chemistry; Biology","score_opus":0.013739562099690418,"score_gpt":0.23801679658086167,"score_spread":0.22427723448117126,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2761453615","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983612,0.00018253703,0.000016724978,0.000646898,0.000048621412,0.000385611,0.00006943687,0.00001319082,0.00027580658],"genre_scores_gemma":[0.9985454,0.0009206839,0.00018253055,0.00021896865,0.000030541036,0.00000678804,0.00003077924,0.000010355805,0.000053958665],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99808174,0.000048438967,0.00026673972,0.000570863,0.0005288304,0.0005034084],"domain_scores_gemma":[0.99901617,0.00009668026,0.00027235955,0.00035579188,0.0000050722133,0.0002539486],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.000739829,0.00023875608,0.00020572671,0.00007197166,0.0011973908,0.00053817226,0.0005916794,0.00008132331,0.00032264684],"category_scores_gemma":[0.00035875317,0.0001530305,0.000018867535,0.00031095147,0.003324681,0.0010499905,0.00051596056,0.00016339167,0.00009412279],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010161011,0.00009809149,0.90803164,0.00001166871,0.000006010059,0.0000060280677,0.0033972876,0.00008269886,0.08240035,0.000004636811,0.00005701981,0.005802965],"study_design_scores_gemma":[0.0019341353,0.00005959131,0.97600013,0.000039770708,0.000016069655,0.000011823499,0.00029989288,0.0012806305,0.019087026,0.00025200035,0.00073680305,0.00028210273],"about_ca_topic_score_codex":0.0046954006,"about_ca_topic_score_gemma":0.0015190375,"teacher_disagreement_score":0.067968525,"about_ca_system_score_codex":0.00016740273,"about_ca_system_score_gemma":0.000047400063,"threshold_uncertainty_score":0.9993877},"labels":[],"label_agreement":null},{"id":"W2765253715","doi":"10.1128/genomea.01248-17","title":"Complete Genome Sequence of <i>Exiguobacterium</i> sp. Strain N4-1P, a Psychrophilic Bioemulsifier Producer Isolated from a Cold Marine Environment in North Atlantic Canada","year":2017,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada; Memorial University of Newfoundland; Research and Development Corporation of Newfoundland and Labrador","keywords":"Psychrophile; Extremophile; Strain (injury); Biology; Whole genome sequencing; Extreme environment; Bacteria; Genome; Microbiology; Thermophile; Gene; Genetics","score_opus":0.023637032156775973,"score_gpt":0.2147137691650967,"score_spread":0.19107673700832073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2765253715","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927989,0.000020677402,0.00001007561,0.00040614317,0.00023665761,0.00068311294,0.0052611628,0.000010562941,0.00057270075],"genre_scores_gemma":[0.9969609,0.00016964656,0.00023506317,0.0005080976,0.00004912773,0.000013209091,0.0016248864,0.000019877873,0.0004192337],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9975905,0.000057885813,0.00058742234,0.00067251857,0.0005539887,0.00053769356],"domain_scores_gemma":[0.99845695,0.000010029576,0.00046288568,0.0008819383,0.00001661536,0.00017157209],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001853189,0.00030070695,0.00035237047,0.000042673146,0.00020241998,0.000069651665,0.000781101,0.000076029355,0.004245204],"category_scores_gemma":[0.000015413592,0.000288031,0.00004977733,0.00015619477,0.00027848518,0.00020434002,0.00051462936,0.00015652322,0.00032086927],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046224402,0.00010565809,0.3512811,0.000010059799,0.000026010995,0.000025035073,0.00013697377,0.00006920591,0.6479707,7.3684e-7,0.000103760525,0.00022453099],"study_design_scores_gemma":[0.0008713646,0.00010271534,0.919957,0.000012467605,0.000016916685,0.000001841715,0.000017795383,0.00010626327,0.0004349447,0.0000116936435,0.07812319,0.0003438263],"about_ca_topic_score_codex":0.38842005,"about_ca_topic_score_gemma":0.53760445,"teacher_disagreement_score":0.64753574,"about_ca_system_score_codex":0.0006620178,"about_ca_system_score_gemma":0.00009893138,"threshold_uncertainty_score":0.9999572},"labels":[],"label_agreement":null},{"id":"W2766190056","doi":"10.1038/s41598-017-14032-5","title":"Aerobic degradation of crude oil by microorganisms in soils from four geographic regions of China","year":2017,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Science Foundation of Tianjin City; National Natural Science Foundation of China","keywords":"Microcosm; Bioremediation; Environmental chemistry; Soil water; AlkB; Microbial population biology; Soil texture; Temperature gradient gel electrophoresis; Soil microbiology; Phenanthrene; Proteobacteria; Microorganism; Soil contamination; Environmental science; Chemistry; Biology; Ecology; Soil science; Contamination; Bacteria; 16S ribosomal RNA","score_opus":0.011306363847379729,"score_gpt":0.21442497656151158,"score_spread":0.20311861271413184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766190056","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972537,0.00003419419,0.000028521308,0.000206274,0.0011529089,0.00009008253,0.000022701994,0.000009951353,0.0012016218],"genre_scores_gemma":[0.9971318,0.000025072459,0.000528752,0.00001176334,0.0000075899784,0.0000015144748,0.00007561204,0.0000065197914,0.0022113593],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99841744,0.000035291698,0.0005149987,0.0004654943,0.0003780779,0.00018867783],"domain_scores_gemma":[0.9981656,0.000011353028,0.0008411672,0.0008903621,0.00002085744,0.0000706259],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007246367,0.0001038562,0.00017705308,0.00007597964,0.00021414683,0.00008814967,0.00031455417,0.00007795013,0.0007689942],"category_scores_gemma":[0.00013876535,0.00009253813,0.00007014322,0.00022513924,0.00064202666,0.0002589235,0.0001462786,0.00006943252,0.000030044035],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000029917849,0.000064464824,0.17951658,0.000003929501,0.0000030537376,0.00000978238,0.00011141427,0.0000040384834,0.81325185,0.0000024187425,0.0056826775,0.0013468232],"study_design_scores_gemma":[0.00013833515,0.0000098867795,0.328718,0.00003108491,0.000007497222,0.000006825329,0.00001986363,0.000012562814,0.66819006,0.00071644515,0.0020519868,0.0000974779],"about_ca_topic_score_codex":0.0032642446,"about_ca_topic_score_gemma":0.0022413114,"teacher_disagreement_score":0.14920142,"about_ca_system_score_codex":0.000039446113,"about_ca_system_score_gemma":0.00002901903,"threshold_uncertainty_score":0.84199476},"labels":[],"label_agreement":null},{"id":"W2766490689","doi":"10.15626/eco-tech.2014.058","title":"Phytoremediation of petroleum hydrocarbons contaminated soils with alfalfa (Medicago sativa)","year":2017,"lang":"en","type":"article","venue":"Linnaeus Eco-Tech","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Phytoremediation; Medicago sativa; Environmental science; Environmental remediation; Contamination; Petroleum; Soil contamination; Soil water; Pollutant; Biomass (ecology); Amendment; Total petroleum hydrocarbon; Waste management; Environmental chemistry; Agronomy; Chemistry; Biology; Ecology","score_opus":0.00808790870312003,"score_gpt":0.2201587228150486,"score_spread":0.21207081411192857,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766490689","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9822909,0.0000136572635,0.00018103041,0.0009897618,0.00027317932,0.00025704328,0.000040457402,0.00005902504,0.015894907],"genre_scores_gemma":[0.99841005,0.000047023073,0.00043051338,0.00017571327,0.000086313536,0.000008766251,0.000041027546,0.000019501358,0.0007810768],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99844277,0.000044623524,0.0003403909,0.0003642917,0.0004753948,0.00033250998],"domain_scores_gemma":[0.9986576,0.000038521885,0.00051999994,0.00061344024,0.000018849873,0.00015160294],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00031342276,0.00020175042,0.00027059752,0.000051248433,0.0002432266,0.00004839685,0.0005233671,0.00016093205,0.00094868493],"category_scores_gemma":[0.0001557325,0.00016008518,0.000060751707,0.00011346885,0.00043892287,0.0002489527,0.00015470646,0.00017934311,0.00034812017],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000119915654,0.00025314963,0.3940516,0.000023619748,0.000054764794,0.00001989664,0.00047411848,0.000023328013,0.5888281,0.000055578956,0.0044987896,0.011597143],"study_design_scores_gemma":[0.0018225944,0.0003412431,0.626189,0.000060278897,0.00004307238,0.000007764079,0.00008087451,0.0013423809,0.3595055,0.00015987994,0.010040873,0.00040656896],"about_ca_topic_score_codex":0.0004274548,"about_ca_topic_score_gemma":0.0015228781,"teacher_disagreement_score":0.23213737,"about_ca_system_score_codex":0.00010476861,"about_ca_system_score_gemma":0.000037208476,"threshold_uncertainty_score":0.9999646},"labels":[],"label_agreement":null},{"id":"W2766675971","doi":"10.1371/journal.pone.0186704","title":"Growing plants on oily, nutrient-poor soil using a native symbiotic fungus","year":2017,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan; Nortel (Canada)","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada","keywords":"Tailings; Germination; Biology; Nutrient; Agronomy; Petrochemical; Botany; Biomass (ecology); Symbiosis; Horticulture; Chemistry; Environmental science; Ecology; Bacteria; Environmental engineering","score_opus":0.05651954976941391,"score_gpt":0.2368456876850535,"score_spread":0.18032613791563962,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766675971","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99251306,0.000008902868,0.000004784859,0.00032774554,0.000117064046,0.00019490941,0.000037536003,0.000032010445,0.0067640105],"genre_scores_gemma":[0.9984778,0.000024499283,0.0003772964,0.0004649251,0.00007713292,0.0000017314326,0.0000066614634,0.000012178819,0.0005577833],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988657,0.000030618627,0.00014920732,0.0002847643,0.00040156985,0.00026813048],"domain_scores_gemma":[0.99940574,0.000028381179,0.00015510803,0.00029236817,0.000008667121,0.00010971323],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00013251638,0.00013035622,0.00015770088,0.000027716926,0.00041605052,0.000089600464,0.0003055031,0.00007209002,0.0009582414],"category_scores_gemma":[0.00013285097,0.000116336974,0.00003754737,0.00004497936,0.00012902835,0.00028236167,0.00017230416,0.00012007621,0.0012970753],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050287137,0.00063604466,0.01987262,0.000014201838,0.000040524574,0.000015060463,0.00021859295,0.000009654027,0.9782165,0.000019274043,0.0002353552,0.00067183306],"study_design_scores_gemma":[0.0006300335,0.00008797255,0.01904871,0.00018697738,0.000032858243,0.0000016950901,0.00006302268,0.0012024479,0.97835034,0.00007302575,0.000097970864,0.00022496477],"about_ca_topic_score_codex":0.00017724848,"about_ca_topic_score_gemma":0.00006338047,"teacher_disagreement_score":0.006206227,"about_ca_system_score_codex":0.00016525266,"about_ca_system_score_gemma":0.0000103959765,"threshold_uncertainty_score":0.999955},"labels":[],"label_agreement":null},{"id":"W2769199284","doi":"10.1021/acs.est.7b04145","title":"Natural Attenuation and Anaerobic Benzene Detoxification Processes at a Chlorobenzene-Contaminated Industrial Site Inferred from Field Investigations and Microcosm Studies","year":2017,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"China Scholarship Council; National Natural Science Foundation of China; Ontario Genomics Institute; Genome Canada; DuPont","keywords":"Microcosm; Environmental chemistry; Reductive dechlorination; Benzene; Chemistry; Environmental remediation; Dehalococcoides; Contamination; Chlorobenzene; Biodegradation; Organic chemistry; Ecology; Biology; Catalysis","score_opus":0.02083021262719555,"score_gpt":0.2472886992793944,"score_spread":0.22645848665219884,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2769199284","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965579,0.00028880432,0.000007827475,0.0025625045,0.00013544025,0.0003215847,0.000029191287,0.00005011161,0.00004664395],"genre_scores_gemma":[0.9986572,0.00036064853,0.00058797805,0.00021209383,0.000022099211,0.000016053267,0.000027353643,0.0000068906743,0.00010967949],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99866885,0.000018026094,0.00022396621,0.00058986834,0.00023377808,0.00026553078],"domain_scores_gemma":[0.9992489,0.00004437429,0.00026318585,0.00033660833,0.000008573685,0.0000983517],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00017139797,0.0001734672,0.0001614838,0.0001238748,0.0012051859,0.00010098536,0.00037680575,0.00017321286,0.00012587519],"category_scores_gemma":[0.00047166456,0.00015544714,0.000013223238,0.0002749936,0.0027434325,0.0006740286,0.00092150865,0.00016744871,0.00008602197],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008303375,0.00001709951,0.28067923,0.0000014667625,0.0000045905476,0.0000010794249,0.00027432168,0.0000013772773,0.7121005,0.000006929224,0.00006772182,0.006837357],"study_design_scores_gemma":[0.00042320628,0.000066837994,0.42686614,0.000015579482,0.00001526514,0.000007391709,0.00024280902,0.00008196381,0.571131,0.00024594966,0.00073734147,0.00016652468],"about_ca_topic_score_codex":0.00019157706,"about_ca_topic_score_gemma":0.0012239206,"teacher_disagreement_score":0.1461869,"about_ca_system_score_codex":0.00032496,"about_ca_system_score_gemma":0.000019294908,"threshold_uncertainty_score":0.99997056},"labels":[],"label_agreement":null},{"id":"W2770034471","doi":"10.1093/femsec/fix141","title":"A switch of chlorinated substrate causes emergence of a previously undetected native Dehalobacter population in an established Dehalococcoides-dominated chloroethene-dechlorinating enrichment culture","year":2017,"lang":"en","type":"article","venue":"FEMS Microbiology Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Dehalococcoides; Dehalogenase; Biology; Bioaugmentation; Reductive dechlorination; Enrichment culture; Population; Methanogen; Ecology; Environmental chemistry; Bioremediation; Bacteria; Chemistry; Organic chemistry; Biodegradation; Methane; Contamination; Genetics","score_opus":0.015050114321418936,"score_gpt":0.26654300340064974,"score_spread":0.2514928890792308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2770034471","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984895,0.00002212211,0.000008494387,0.000071056864,0.00038698423,0.00073103874,0.000072805495,0.000031499374,0.00018651754],"genre_scores_gemma":[0.9991847,0.000053653846,0.00038741447,0.000044158853,0.000017537584,0.000025796111,0.00018311934,0.000017357697,0.0000862457],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99767864,0.00027481862,0.0008278801,0.0006006856,0.000089047055,0.00052895123],"domain_scores_gemma":[0.9980614,0.0000796354,0.0011536494,0.0004943762,0.00012083139,0.00009007299],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00058878626,0.0002960928,0.000579951,0.00014709293,0.00018204971,0.000021611708,0.000668846,0.00043493,0.0010623583],"category_scores_gemma":[0.00039631434,0.0002600509,0.00007938678,0.00031103764,0.00049902743,0.00039301495,0.00027708395,0.0002641068,0.000028289582],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000118634605,0.00016221106,0.44029972,0.000012654642,0.000019215175,0.000006686746,0.000648311,0.000053571905,0.55837107,0.000012809002,0.000028239596,0.00026689057],"study_design_scores_gemma":[0.0009787906,0.00037611346,0.7005042,0.000026989193,0.000019448617,0.00001262008,0.00019384289,0.0000881894,0.29747963,0.00008217973,0.000034938796,0.00020303416],"about_ca_topic_score_codex":0.0023741517,"about_ca_topic_score_gemma":0.030365685,"teacher_disagreement_score":0.2608914,"about_ca_system_score_codex":0.00021256946,"about_ca_system_score_gemma":0.000044302113,"threshold_uncertainty_score":0.99998516},"labels":[],"label_agreement":null},{"id":"W2770738113","doi":"10.1016/j.scitotenv.2017.11.150","title":"37Cl-compound specific isotope analysis and assessment of functional genes for monitoring monochlorobenzene (MCB) biodegradation under aerobic conditions","year":2017,"lang":"en","type":"article","venue":"The Science of The Total Environment","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Eni; Università degli Studi di Milano-Bicocca","keywords":"Microcosm; Biodegradation; Chemistry; Environmental chemistry; Isotope analysis; Fractionation; Reductive dechlorination; Chromatography; Organic chemistry; Ecology; Biology","score_opus":0.03188332394338629,"score_gpt":0.26705055104756975,"score_spread":0.23516722710418347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2770738113","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973979,0.00002952853,0.00093916693,0.00075595215,0.00021752232,0.0003037209,0.00003764282,0.000003440699,0.00031514576],"genre_scores_gemma":[0.997953,0.00010468896,0.0015692776,0.00000707181,0.000025167721,0.000008811489,0.0000043545087,0.0000039250294,0.00032371527],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988594,0.00002736912,0.00022571612,0.0002629516,0.00045904593,0.0001654949],"domain_scores_gemma":[0.9989864,0.000039948507,0.00035791335,0.00055589346,0.000009505738,0.000050315226],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005661934,0.000102715036,0.0001337893,0.00004358362,0.0008860601,0.00006436946,0.0004973774,0.000027415486,0.0003945265],"category_scores_gemma":[0.000012932887,0.0000622388,0.00009764133,0.00016357024,0.0016134368,0.00024109076,0.0003854176,0.000054497556,0.000008929011],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007232224,0.00005524506,0.0073365048,0.0000021542216,0.00003325663,3.028996e-8,0.000044507487,0.028068645,0.9634845,0.0002013783,0.000026231432,0.000740274],"study_design_scores_gemma":[0.00016277737,0.000027175904,0.76406956,0.0000043916857,0.00007510086,0.0000010817087,0.00007614386,0.0029487133,0.23227005,0.00023925256,0.000057650785,0.000068073925],"about_ca_topic_score_codex":0.0001060286,"about_ca_topic_score_gemma":0.000007351266,"teacher_disagreement_score":0.75673306,"about_ca_system_score_codex":0.0001530629,"about_ca_system_score_gemma":0.000018197667,"threshold_uncertainty_score":0.6814948},"labels":[],"label_agreement":null},{"id":"W2773415790","doi":"10.1002/cjce.23115","title":"Evaluation of the effects of AlkylPhenolic compounds on kinetic parameters in a moving bed biofilm reactor","year":2017,"lang":"en","type":"article","venue":"The Canadian Journal of Chemical Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Moving bed biofilm reactor; Hydraulic retention time; Chemistry; Substrate (aquarium); Wastewater; Stover; Pulp and paper industry; Environmental engineering; Biofilm; Environmental science; Mathematics; Ecology","score_opus":0.013290153906563002,"score_gpt":0.20914375519544945,"score_spread":0.19585360128888646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2773415790","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993361,0.000026180178,0.0000011364507,0.0002452211,0.00016884974,0.00009315528,0.0000021322344,7.6050134e-7,0.00012645448],"genre_scores_gemma":[0.99988645,0.000001251146,0.00005977035,0.000030290917,0.000015444313,4.7301572e-7,1.9802918e-7,0.000004497676,0.0000016094212],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99930584,0.000031012012,0.0001979995,0.000049138667,0.00029745346,0.00011852589],"domain_scores_gemma":[0.99941766,0.00007606826,0.00021631765,0.00018027549,0.000022197162,0.00008747011],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005481906,0.00006072477,0.00011029277,0.000036119895,0.00002828249,0.0000150183105,0.00037180752,0.000039534254,0.000025457892],"category_scores_gemma":[0.0010333859,0.000037715003,0.00004933613,0.000070311806,0.00011169478,0.000044669494,0.000021889708,0.0001443452,0.0000014469514],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000385089,0.0000062018216,0.0028156922,0.000008725611,0.0000082523775,8.986839e-7,0.00020447222,0.0025070186,0.9934186,0.0000057266343,0.00003728168,0.0009833305],"study_design_scores_gemma":[0.00038839114,0.000025225878,0.058496073,0.00015740748,0.000028689417,0.000004670505,0.0000040578802,0.0038692246,0.9369095,0.00003753127,0.000028559742,0.00005068754],"about_ca_topic_score_codex":0.0025343955,"about_ca_topic_score_gemma":0.00095308403,"teacher_disagreement_score":0.056509066,"about_ca_system_score_codex":0.00026235144,"about_ca_system_score_gemma":0.00007207793,"threshold_uncertainty_score":0.38312647},"labels":[],"label_agreement":null},{"id":"W2773985565","doi":"10.1007/978-3-319-70548-4_87","title":"Biostimulation of Microbial Community by Carob (Ceratonia siliqua) to Degrade Total Petroleum Hydrocarbon (TPH) in Contaminated Soil","year":2017,"lang":"en","type":"book-chapter","venue":"Advances in Science, Technology & Innovation/Advances in science, technology & innovation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Ceratonia siliqua; Biostimulation; Total petroleum hydrocarbon; Contamination; Soil contamination; Environmental chemistry; Environmental science; Biology; Chemistry; Botany; Bioremediation; Ecology","score_opus":0.008939490727434541,"score_gpt":0.2711296745053272,"score_spread":0.26219018377789266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2773985565","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96010375,0.0006230513,0.00050572027,0.0014010175,0.0010437293,0.0014923458,0.000121187724,0.00030508594,0.034404118],"genre_scores_gemma":[0.99391276,0.00051254354,0.003134475,0.00031658733,0.000026384943,0.000090292655,0.00013191784,0.000054718996,0.0018203363],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99169594,0.000071537776,0.0030380143,0.0021451737,0.0015452743,0.0015040677],"domain_scores_gemma":[0.99417055,0.00013366526,0.002726513,0.0019827136,0.00090049155,0.00008605401],"candidate_categories":["metaepi_narrow","bibliometrics","sts","research_integrity"],"consensus_categories":["bibliometrics","research_integrity"],"category_scores_codex":[0.004859788,0.00092612597,0.0012622835,0.022769565,0.0011187617,0.00012814188,0.0046097008,0.0015911929,0.00008984895],"category_scores_gemma":[0.0023910496,0.0009869747,0.00006683521,0.03610814,0.018954877,0.0042016297,0.0017966849,0.0026964631,0.00006414629],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007878565,0.00024601922,0.070526674,0.000034664256,0.0000058766313,0.000011315641,0.00019621466,0.0022880936,0.83279216,0.05774275,0.00006911785,0.03600832],"study_design_scores_gemma":[0.004174747,0.0014144342,0.014394291,0.00137751,0.000031460946,0.00009087404,0.0009292608,0.0014251678,0.82778233,0.10151356,0.04383457,0.0030317798],"about_ca_topic_score_codex":0.0001469526,"about_ca_topic_score_gemma":0.00342672,"teacher_disagreement_score":0.056132387,"about_ca_system_score_codex":0.0027140817,"about_ca_system_score_gemma":0.0006838809,"threshold_uncertainty_score":0.99970496},"labels":[],"label_agreement":null},{"id":"W2776447092","doi":"10.1016/j.envpol.2017.11.097","title":"Microbial community composition and PAHs removal potential of indigenous bacteria in oil contaminated sediment of Taean coast, Korea","year":2017,"lang":"en","type":"article","venue":"Environmental Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":146,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Bacteroidetes; Firmicutes; Proteobacteria; Actinobacteria; Environmental chemistry; Halomonas; Bioremediation; Rhodococcus; Biology; Microbial population biology; Metagenomics; Bacteria; Chemistry; Contamination; 16S ribosomal RNA; Ecology","score_opus":0.006841725875326928,"score_gpt":0.19940946863598902,"score_spread":0.1925677427606621,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2776447092","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990712,0.000015153939,0.000015150158,0.00007605423,0.0001186526,0.00015361287,0.0003341258,0.000006546321,0.00020953217],"genre_scores_gemma":[0.9993462,0.000086508,0.00026688562,0.000045670706,0.0000140503125,0.0000012511761,0.0001763122,0.000008460793,0.000054656102],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99892056,0.00020229798,0.0003372764,0.00016946407,0.00018834329,0.00018208561],"domain_scores_gemma":[0.9992812,0.0000095499645,0.0003678285,0.00027755884,0.000001911387,0.00006192127],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038106617,0.00013836278,0.00020050595,0.000040173552,0.0002597745,0.00001747667,0.00020217313,0.00010697169,0.00036467914],"category_scores_gemma":[0.0000074801574,0.00014074691,0.000042206048,0.00003200983,0.0006222805,0.00020035345,0.00028926335,0.00014614582,0.000022148472],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013316107,0.0003761971,0.040482488,0.000012582897,0.0000087062435,0.0000048603256,0.0009135346,0.000022634247,0.94898695,0.0000012226946,0.000032941614,0.009024718],"study_design_scores_gemma":[0.001079187,0.00010444202,0.6973183,0.00002467939,0.000013146578,0.000018417166,0.00023656362,0.000063340594,0.3009609,0.000008547799,0.00006557246,0.00010687627],"about_ca_topic_score_codex":0.002921802,"about_ca_topic_score_gemma":0.00059054286,"teacher_disagreement_score":0.65683585,"about_ca_system_score_codex":0.00021443052,"about_ca_system_score_gemma":0.0000063270877,"threshold_uncertainty_score":0.5739493},"labels":[],"label_agreement":null},{"id":"W2780449764","doi":"10.1038/s41598-017-18475-8","title":"Residues His172 and Lys238 are Essential for the Catalytic Activity of the Maleylacetate Reductase from Sphingobium chlorophenolicum Strain L-1","year":2017,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Agriculture and Agri-Food Canada","funders":"King Saud University; Saskatchewan Health Research Foundation","keywords":"Strain (injury); Chemistry; Reductase; Catalysis; Biochemistry; Microbiology; Enzyme; Biology","score_opus":0.015011952569048888,"score_gpt":0.23850742206321443,"score_spread":0.22349546949416554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2780449764","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99344313,0.000031733933,0.000012397939,0.0024138466,0.0031213537,0.00047847332,0.00015818389,0.000010823015,0.00033005423],"genre_scores_gemma":[0.9970914,0.0000056860604,0.00010250937,0.000028070473,0.00007136182,0.0000057151724,0.000014391397,0.000007862546,0.0026729999],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985697,0.000034328084,0.00026151113,0.0005374246,0.00037441164,0.00022257793],"domain_scores_gemma":[0.9973699,0.000046017005,0.0007901719,0.0016970724,0.000025751393,0.0000711078],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00095504354,0.00012330865,0.0001476049,0.000015240838,0.0011602568,0.00033471303,0.0005615298,0.00005308283,0.00025626615],"category_scores_gemma":[0.0004814279,0.000070104674,0.00008632074,0.00007132797,0.0014722531,0.00023958634,0.0005249514,0.00008341371,0.000011549263],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002191257,0.000035125224,0.01848639,0.000009449904,0.000012762658,0.000008835545,0.0004932754,0.000012609257,0.96809715,0.0000034723703,0.011181406,0.0016375866],"study_design_scores_gemma":[0.00016889907,0.000008324951,0.3290739,0.00002077095,0.000043882683,0.000015423586,0.00009991791,0.00012228312,0.66338474,0.0013627975,0.005575271,0.00012380804],"about_ca_topic_score_codex":0.0016196317,"about_ca_topic_score_gemma":0.002720008,"teacher_disagreement_score":0.31058753,"about_ca_system_score_codex":0.000042452804,"about_ca_system_score_gemma":0.000040043087,"threshold_uncertainty_score":0.89238745},"labels":[],"label_agreement":null},{"id":"W2789950306","doi":"10.1016/j.watres.2018.02.039","title":"Novel insights into freshwater hydrocarbon-rich sediments using metatranscriptomics: Opening the black box","year":2018,"lang":"en","type":"article","venue":"Water Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Environment and Climate Change Canada; University of Windsor","funders":"Natural Sciences and Engineering Research Council of Canada; Environment and Climate Change Canada","keywords":"Land reclamation; Environmental science; Bioremediation; Oil sands; Hydrocarbon; Methane; Environmental remediation; Ecosystem; Biogeochemical cycle; Environmental chemistry; Contamination; Ecology; Chemistry; Biology; Geography","score_opus":0.06681959558842346,"score_gpt":0.3190484936920178,"score_spread":0.2522288981035944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2789950306","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942003,0.000016212996,0.00026954882,0.0006504865,0.00022099714,0.00038839076,0.0000044534686,0.000020676554,0.004228953],"genre_scores_gemma":[0.995867,0.000008755051,0.0016018181,0.00042297403,0.00017424574,0.0000052991845,0.000011625146,0.000022798402,0.0018854704],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976371,0.00019630523,0.0002519595,0.0004311472,0.00081212097,0.00067139295],"domain_scores_gemma":[0.99938804,0.000015863969,0.000027494823,0.0003832569,0.00004854276,0.00013680154],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0012040115,0.00015575225,0.00013205099,0.000083381245,0.0005707741,0.0001825247,0.0006724605,0.00009075422,0.003938913],"category_scores_gemma":[0.000018176286,0.000080792575,0.000046046738,0.0003483056,0.0009257355,0.00028409463,0.00061246636,0.0003069484,0.004641586],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034277004,0.00004378308,0.0019852556,0.000004258526,0.000018983581,0.000004308171,0.007860832,0.000026561878,0.9879194,0.0000051102525,0.0019322555,0.0001649751],"study_design_scores_gemma":[0.00038514382,0.000063894324,0.00052983133,0.000010767867,0.0000081944645,0.0000044661087,0.00021129496,0.005132462,0.9304331,0.00018929916,0.06287692,0.00015466055],"about_ca_topic_score_codex":0.0022404536,"about_ca_topic_score_gemma":0.0014291479,"teacher_disagreement_score":0.06094466,"about_ca_system_score_codex":0.0002116075,"about_ca_system_score_gemma":0.000018254661,"threshold_uncertainty_score":0.9969716},"labels":[],"label_agreement":null},{"id":"W2790496036","doi":"10.1016/j.ijbiomac.2018.01.177","title":"Production and characterization of novel hydrocarbon degrading enzymes from Alcanivorax borkumensis","year":2018,"lang":"en","type":"article","venue":"International Journal of Biological Macromolecules","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cape Breton University; TechnoRem (Canada); Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Hexadecane; Lipase; Chemistry; Esterase; Hexane; Alkane; Hydrocarbon; Food science; Pseudomonas; Chromatography; Enzyme; Biochemistry; Organic chemistry; Bacteria; Biology","score_opus":0.018133157906946123,"score_gpt":0.23931575739269173,"score_spread":0.22118259948574562,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2790496036","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978112,0.000024409066,0.0007759209,0.0006480064,0.00050125946,0.000044555985,0.000031666834,0.000005802479,0.00015716767],"genre_scores_gemma":[0.9974868,0.00013469513,0.0019018953,0.00019506022,0.00025026652,2.6274608e-7,0.000015068068,0.0000035593246,0.000012369751],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992132,0.000029562068,0.0003147824,0.00013950875,0.00022371991,0.0000791882],"domain_scores_gemma":[0.99943364,0.000021375385,0.00036619118,0.00004654253,0.000085022526,0.000047236117],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015962905,0.00007993447,0.00012286569,0.00004594986,0.000026167228,0.000021505262,0.00017645511,0.00006177749,0.00029218433],"category_scores_gemma":[0.00013966465,0.000056674362,0.000052243176,0.00007638319,0.00022832549,0.00012052013,0.000084285646,0.000059628845,0.000009367985],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008311796,0.0000724927,0.04169221,5.0122264e-7,0.000034206318,0.0000034531356,0.00008832145,9.644677e-7,0.95376754,0.000045921603,0.000044954875,0.0041662925],"study_design_scores_gemma":[0.00024531467,0.00018278982,0.21202834,0.00003771258,0.000010758836,0.000042696414,0.000028243367,0.00010717307,0.7863602,0.0001843765,0.0006934746,0.00007890701],"about_ca_topic_score_codex":0.000043089716,"about_ca_topic_score_gemma":0.00001594721,"teacher_disagreement_score":0.17033614,"about_ca_system_score_codex":0.00004310462,"about_ca_system_score_gemma":0.0000068852028,"threshold_uncertainty_score":0.31992134},"labels":[],"label_agreement":null},{"id":"W2791409810","doi":"10.1016/j.ecoenv.2018.01.052","title":"Energetic contaminants inhibit plant litter decomposition in soil","year":2018,"lang":"en","type":"article","venue":"Ecotoxicology and Environmental Safety","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Polytechnique Montréal; McGill University","funders":"Strategic Environmental Research and Development Program","keywords":"Loam; Chemistry; Environmental chemistry; Dactylis glomerata; Decomposition; Soil biology; Litter; Agronomy; Straw; Soil water; Animal science; Environmental science; Biology; Soil science; Poaceae","score_opus":0.0043951411783587375,"score_gpt":0.20017432912959685,"score_spread":0.1957791879512381,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791409810","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960196,0.000025430729,0.000019397152,0.00032200178,0.00016736996,0.00016840256,0.000055418484,0.000013240465,0.0032091446],"genre_scores_gemma":[0.99782526,0.00018832555,0.00010366928,0.0014293842,0.000048113976,0.000005833792,0.00007479291,0.000008017954,0.00031656984],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989793,0.000079029334,0.00024240898,0.0003216187,0.000094265815,0.00028339762],"domain_scores_gemma":[0.9997125,0.000027187622,0.00006006204,0.000105101906,5.437176e-7,0.000094550094],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001831472,0.00013940247,0.00014250801,0.00003146732,0.00013360361,0.000008383901,0.00008465376,0.00015318996,0.0066226814],"category_scores_gemma":[0.000004983112,0.00012744383,0.000030333304,0.000057430792,0.00048267524,0.00011954847,0.0001638928,0.000107412234,0.0010849512],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017947218,0.00021170592,0.41793853,0.0000027669996,0.000007436586,0.00001916459,0.0003899128,0.00001343304,0.5750522,0.000013919757,0.0014634088,0.0047080275],"study_design_scores_gemma":[0.0009208984,0.00023887008,0.9045405,0.000008984792,0.000007277218,0.00003875041,0.00006776404,0.0002744341,0.08338335,0.0000881885,0.0102241235,0.00020686534],"about_ca_topic_score_codex":0.00005003427,"about_ca_topic_score_gemma":0.0015200959,"teacher_disagreement_score":0.49166885,"about_ca_system_score_codex":0.00018929379,"about_ca_system_score_gemma":0.0000032396633,"threshold_uncertainty_score":0.9996928},"labels":[],"label_agreement":null},{"id":"W2791439010","doi":"10.1007/s00449-018-1921-4","title":"Microbial diversity and activity of an aged soil contaminated by polycyclic aromatic hydrocarbons","year":2018,"lang":"en","type":"article","venue":"Bioprocess and Biosystems Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Bioremediation; Bacillus cereus; Environmental chemistry; Ralstonia; Soil contamination; Soil microbiology; Microorganism; Biology; Contamination; Chemistry; Soil water; Ecology; Bacteria","score_opus":0.005583590164084839,"score_gpt":0.17667756912328414,"score_spread":0.1710939789591993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791439010","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99955356,0.000047861464,0.000069637754,0.000016388842,0.000091036905,0.00011284568,0.000020349118,0.00003909955,0.000049226397],"genre_scores_gemma":[0.99983734,0.000015158627,0.000049584334,0.000014941642,0.00002816099,8.0963633e-7,0.000004669312,0.0000069039893,0.000042418676],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993724,0.000014313477,0.00013229034,0.00021412873,0.00010690053,0.00015993923],"domain_scores_gemma":[0.9997189,0.0000100738835,0.000077564575,0.00008589634,0.0000018983603,0.0001056377],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001274348,0.00012492416,0.00016047515,0.000031227908,0.00016628728,0.000019640882,0.00009284651,0.000084396146,0.000010377366],"category_scores_gemma":[0.000011210806,0.00010805203,0.000015470447,0.00013600776,0.00011798154,0.00014866803,0.00017923213,0.000047431735,0.000004128444],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013115801,0.00003018159,0.012595045,0.000037301397,0.000008589668,8.041133e-7,0.00040150192,3.6227758e-7,0.9861245,2.8509245e-7,0.000034687208,0.0007536284],"study_design_scores_gemma":[0.000565163,0.00015444164,0.095953934,0.000057498895,0.00001890068,0.000014826146,0.00006664408,0.004017077,0.8987222,0.0000018450799,0.00018710922,0.00024037824],"about_ca_topic_score_codex":0.00093224447,"about_ca_topic_score_gemma":0.00022904093,"teacher_disagreement_score":0.08740232,"about_ca_system_score_codex":0.000025158679,"about_ca_system_score_gemma":0.000002825606,"threshold_uncertainty_score":0.4406234},"labels":[],"label_agreement":null},{"id":"W2791603344","doi":"10.1016/j.jhazmat.2018.03.030","title":"Microbial degradation of Cold Lake Blend and Western Canadian select dilbits by freshwater enrichments","year":2018,"lang":"en","type":"article","venue":"Journal of Hazardous Materials","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":48,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Biodegradation; Environmental chemistry; Microbial population biology; Hydrocarbon; Microbial consortium; Arthrobacter; Pseudomonas; Rhodococcus; Microbial biodegradation; Chemistry; Polycyclic aromatic hydrocarbon; Relative species abundance; Contamination; Bacteria; Environmental science; Microorganism; Abundance (ecology); Ecology; Biology; Organic chemistry","score_opus":0.005457312187112602,"score_gpt":0.20128096643977178,"score_spread":0.19582365425265919,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791603344","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985455,0.000017737326,0.000007524279,0.0002878152,0.00050034554,0.00011109319,0.0003681627,0.0000034282468,0.00015834309],"genre_scores_gemma":[0.99840426,0.000044211338,0.00030688374,0.00035576502,0.00011489575,3.414489e-7,0.000016399226,0.0000094479365,0.0007478065],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989581,0.00007279301,0.00044579816,0.00011649819,0.00019623601,0.00021057775],"domain_scores_gemma":[0.99933803,0.000010580084,0.00036929213,0.00007685812,0.00004582164,0.00015941386],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003847708,0.00011090531,0.00022275087,0.0000629274,0.000065118,0.00006289713,0.00014712494,0.00007677137,0.0029923185],"category_scores_gemma":[0.000022682243,0.00008629861,0.00002622378,0.00007518034,0.00011860723,0.00018581202,0.0000424173,0.000043794797,0.00009881051],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045978708,0.000028478018,0.02001225,0.00000650337,0.000015948253,0.0000044638837,0.00010946513,3.0889282e-7,0.94057894,8.289533e-7,0.039010204,0.00018663374],"study_design_scores_gemma":[0.00046152674,0.0002098584,0.011545703,0.0000212303,0.000019550962,0.000042780106,0.0000074533154,6.523585e-7,0.90139383,0.0000048572533,0.086198956,0.00009362741],"about_ca_topic_score_codex":0.0039333254,"about_ca_topic_score_gemma":0.0843126,"teacher_disagreement_score":0.08037928,"about_ca_system_score_codex":0.00008382379,"about_ca_system_score_gemma":0.000044684173,"threshold_uncertainty_score":0.9979191},"labels":[],"label_agreement":null},{"id":"W2791631417","doi":"10.1016/j.chemosphere.2018.01.171","title":"Potential of dissimilatory nitrate reduction pathways in polycyclic aromatic hydrocarbon degradation","year":2018,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":63,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"European Social Fund; Ministério da Ciência, Tecnologia e Ensino Superior","keywords":"Fluoranthene; Environmental chemistry; Microcosm; Denitrification; Chemistry; Nitrate; Anoxic waters; Polycyclic aromatic hydrocarbon; Microbial biodegradation; Biogeochemical cycle; Microbial population biology; Sediment; Naphthalene; Microorganism; Nitrogen; Biology; Bacteria; Organic chemistry; Phenanthrene","score_opus":0.008600458680444345,"score_gpt":0.201270244067155,"score_spread":0.19266978538671065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791631417","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943797,0.000013441146,0.000028842214,0.00007199488,0.00017459637,0.00011135297,0.0000021234944,0.000021199803,0.005196747],"genre_scores_gemma":[0.99913895,0.000008218832,0.00044399832,0.00003317241,0.000048299284,0.0000015454805,0.000011687286,0.000007327056,0.00030682387],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992781,0.00002422142,0.00022355973,0.00018076619,0.00015294895,0.00014037066],"domain_scores_gemma":[0.9996944,0.0000037822097,0.0001107842,0.0001424335,0.0000023116875,0.00004630717],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010822426,0.000086663444,0.00009740684,0.000009396406,0.00003280668,0.00000809637,0.00008919594,0.000075147465,0.00096260884],"category_scores_gemma":[0.000014139637,0.00007933846,0.000030220284,0.00021930483,0.00015235743,0.0001252368,0.0000315406,0.00005721881,0.00019780299],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021258686,0.000057414156,0.009744803,0.000004511157,0.0000021465366,7.406501e-7,0.0002116361,0.000010391802,0.9836641,0.0000012902494,0.00046729553,0.0058144326],"study_design_scores_gemma":[0.00034586305,0.000048663176,0.14839126,0.000020161418,0.0000069446564,0.000005419029,0.00017384137,0.0011991924,0.8492922,0.00029289225,0.00010272018,0.000120836616],"about_ca_topic_score_codex":0.00011009587,"about_ca_topic_score_gemma":0.00007769943,"teacher_disagreement_score":0.13864647,"about_ca_system_score_codex":0.0000816879,"about_ca_system_score_gemma":0.000011461592,"threshold_uncertainty_score":0.99995065},"labels":[],"label_agreement":null},{"id":"W2791833214","doi":"10.1061/(asce)ee.1943-7870.0001369","title":"Dispersion of Weathered Biodiesel, Diesel, and Light Crude Oil in the Presence of Sophorolipid Biosurfactant in Seawater","year":2018,"lang":"en","type":"article","venue":"Journal of Environmental Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Seawater; Dispersion (optics); Diesel fuel; Oil droplet; Biodiesel; Chemistry; Light crude oil; Micelle; Environmental remediation; Salinity; Chemical engineering; Contamination; Geology; Aqueous solution; Emulsion; Organic chemistry; Oceanography; Catalysis","score_opus":0.004268765525425501,"score_gpt":0.17564396438425847,"score_spread":0.17137519885883298,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791833214","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99931216,0.00021656834,0.000008925718,0.000183405,0.00008946163,0.000050711904,0.000008826893,0.0000013472654,0.00012859302],"genre_scores_gemma":[0.99896467,0.00062505977,0.0003351423,0.000022519382,0.000026765265,4.2817626e-7,5.0232643e-7,0.000006379569,0.000018507868],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990157,0.000035635974,0.00041501364,0.000104723105,0.0002725687,0.00015637084],"domain_scores_gemma":[0.9996351,0.00004137766,0.00017117872,0.00010583217,0.0000025431357,0.000043983044],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039171326,0.000108224136,0.00018527737,0.00007472728,0.00001701199,0.0000068163386,0.0002010672,0.00005123155,0.0002748035],"category_scores_gemma":[0.000027585444,0.00007033465,0.000042716525,0.00012803977,0.00016951974,0.00016258401,0.000096865784,0.00012108946,0.000007697263],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044078628,0.00009712253,0.08841701,0.000013449524,0.0000060957577,0.000006004342,0.0013295333,0.00030781652,0.9088739,9.2293334e-7,0.000047291363,0.00085675094],"study_design_scores_gemma":[0.00088360655,0.00035113422,0.5575242,0.00014125755,0.0000120281475,0.000030476529,0.00072101376,0.0011559345,0.43709424,0.000006639336,0.0019218274,0.00015764202],"about_ca_topic_score_codex":0.000035076177,"about_ca_topic_score_gemma":0.000034306227,"teacher_disagreement_score":0.4717797,"about_ca_system_score_codex":0.00007876364,"about_ca_system_score_gemma":0.0000033018732,"threshold_uncertainty_score":0.30089054},"labels":[],"label_agreement":null},{"id":"W2792546428","doi":"10.3390/microorganisms6010013","title":"Biomarkers’ Responses to Reductive Dechlorination Rates and Oxygen Stress in Bioaugmentation Culture KB-1TM","year":2018,"lang":"en","type":"article","venue":"Microorganisms","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Division of Chemical, Bioengineering, Environmental, and Transport Systems; University of Toronto; Pacific Northwest National Laboratory; National Stroke Foundation; Ohio State University; National Institute of General Medical Sciences; Battelle; U.S. Department of Energy; U.S. Department of Defense; Office of Defense Programs; National Science Foundation","keywords":"Bioaugmentation; Transcriptome; Bioremediation; Biology; Strain (injury); Microbiology; Chemistry; Biochemistry; Gene expression; Gene; Bacteria; Genetics","score_opus":0.010697360306559602,"score_gpt":0.25371874910991515,"score_spread":0.24302138880335555,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2792546428","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998177,0.00002368174,0.00006993406,0.0008095961,0.00014625683,0.00028583434,0.00004641763,0.000024812005,0.00041648914],"genre_scores_gemma":[0.9960515,0.000032640924,0.0027502123,0.00040616648,0.000045706955,0.0000039624524,0.000025827185,0.000009932383,0.0006740557],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991583,0.00006203711,0.0001624681,0.00031375978,0.00012334206,0.00018005508],"domain_scores_gemma":[0.9997273,0.0000148349045,0.00005498103,0.000103947605,0.00002030054,0.00007864003],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014868093,0.000118064134,0.00008511318,0.000073365445,0.00009712223,0.000051442352,0.00010898035,0.00007710367,0.000879635],"category_scores_gemma":[0.00005627174,0.00010446346,0.000012603207,0.00040372935,0.00015193413,0.00017470485,0.000104283165,0.00004630032,0.00054265663],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008690767,0.000036107107,0.03648678,0.0000021874523,0.000004737168,0.0000016805031,0.0035071722,3.8684018e-7,0.95510054,0.000006567734,0.0024904828,0.0022764588],"study_design_scores_gemma":[0.0002525471,0.00009743132,0.26073536,0.000010203267,0.0000033810122,0.0000033915996,0.00073475594,0.000004355301,0.7356753,0.00005582177,0.0023137778,0.00011369182],"about_ca_topic_score_codex":0.00020967232,"about_ca_topic_score_gemma":0.0006732013,"teacher_disagreement_score":0.22424859,"about_ca_system_score_codex":0.00016482796,"about_ca_system_score_gemma":0.000009895108,"threshold_uncertainty_score":0.96313864},"labels":[],"label_agreement":null},{"id":"W2793729868","doi":"10.30634/2414-2077.2016.02.3","title":"Analysis of Biosurfactant Production by a New Thermophilic and Halotolerant Bacterium, Geobacillus sp. QT","year":2018,"lang":"en","type":"article","venue":"International Journal of Green Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Thermophile; Halotolerance; Geobacillus stearothermophilus; Bacteria; Biology; Microbiology; Food science; Genetics","score_opus":0.005733539876126726,"score_gpt":0.22468831209658735,"score_spread":0.21895477222046061,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793729868","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99285555,0.000069692556,0.00018709154,0.0063031344,0.00034528397,0.00006102005,0.0000297972,0.000013140797,0.0001353059],"genre_scores_gemma":[0.99888504,0.0001335905,0.00054365495,0.00012391755,0.00008799991,2.484554e-7,0.000004931256,0.0000053821514,0.00021522341],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989271,0.000021668331,0.00043599642,0.0001719707,0.0003238894,0.00011934187],"domain_scores_gemma":[0.9991785,0.000011977509,0.00049422914,0.00012532291,0.00012912054,0.000060829538],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021042416,0.00009995851,0.00022523645,0.00038991033,0.000027293414,0.000013315878,0.00037990577,0.00010766445,0.0011926601],"category_scores_gemma":[0.00007089287,0.00007834201,0.00007668893,0.0005593404,0.00038716456,0.00014525387,0.00012425825,0.000110220615,0.000028254826],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009132931,0.00006342695,0.12505814,0.0000010152007,0.0003881,0.000008085016,0.0001568117,0.000004418047,0.83186895,0.000017942282,0.0011244472,0.041217335],"study_design_scores_gemma":[0.0011945807,0.0007938795,0.36604422,0.000046098816,0.00040435974,0.00042264452,0.00015587547,0.00048711724,0.60346323,0.0008624854,0.025808899,0.00031660992],"about_ca_topic_score_codex":0.00035695307,"about_ca_topic_score_gemma":0.00036131122,"teacher_disagreement_score":0.24098608,"about_ca_system_score_codex":0.00008755951,"about_ca_system_score_gemma":0.000021464335,"threshold_uncertainty_score":0.9997204},"labels":[],"label_agreement":null},{"id":"W2794956892","doi":"10.1021/acsomega.8b00247","title":"Optimizing Reductive Degradation of PAHs Using Anhydrous Ethanol with Magnesium Catalyzed by Glacial Acetic Acid","year":2018,"lang":"en","type":"article","venue":"ACS Omega","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cape Breton University; Memorial University of Newfoundland","funders":"","keywords":"Anthracene; Fluoranthene; Anhydrous; Acetic acid; Chemistry; Coal tar; Polycyclic aromatic hydrocarbon; Nuclear chemistry; Organic chemistry; Coal","score_opus":0.011892153802660281,"score_gpt":0.22601770472356067,"score_spread":0.21412555092090038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794956892","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980069,0.000019697065,0.0006051748,0.00012830245,0.00011564087,0.00018294928,0.000029298484,0.000022479044,0.00088956725],"genre_scores_gemma":[0.9950136,0.0000051644174,0.0045681424,0.000073808165,0.000047562575,0.0000015757577,0.000033251526,0.000012354319,0.00024452235],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990866,0.00004697768,0.00017359306,0.0002500807,0.00023500751,0.00020773742],"domain_scores_gemma":[0.9995782,0.000011288785,0.00015204561,0.00017099545,0.000025714564,0.00006180645],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015555695,0.00012206881,0.00012936455,0.000032370288,0.00009632901,0.000019289022,0.00015262197,0.00007497719,0.00024423472],"category_scores_gemma":[0.000029287585,0.000100683734,0.000020397065,0.00031013947,0.0003482635,0.0002632731,0.00007567644,0.000063694824,0.000093000104],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006866145,0.000042196607,0.0027577179,0.000004717331,0.000005742854,0.000001004977,0.0007017191,0.000016598631,0.9948608,0.0000012118996,0.00036838598,0.0011711966],"study_design_scores_gemma":[0.000422712,0.00011751664,0.0010967379,0.000008481847,0.000023061146,0.00000809083,0.00012709276,0.00022427799,0.9974977,0.000007745496,0.00031482772,0.00015180097],"about_ca_topic_score_codex":0.00037138586,"about_ca_topic_score_gemma":0.0001494536,"teacher_disagreement_score":0.0039629675,"about_ca_system_score_codex":0.000109233544,"about_ca_system_score_gemma":0.00002106625,"threshold_uncertainty_score":0.41057634},"labels":[],"label_agreement":null},{"id":"W2795697566","doi":"10.1128/genomea.00207-18","title":"Draft Genome Sequence of the 1,4-Dioxane-Degrading Bacterium Pseudonocardia dioxanivorans BERK-1","year":2018,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Institute of General Medical Sciences","keywords":"Biology; Whole genome sequencing; 1,4-Dioxane; Bacteria; Pyrosequencing; Genome; Genetics; Gene; Chemistry; Organic chemistry","score_opus":0.016407695261028532,"score_gpt":0.22425508486464155,"score_spread":0.20784738960361301,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2795697566","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9872668,0.00003299491,0.0000882788,0.00027722737,0.00080328196,0.0003900384,0.0004522235,0.000032431388,0.01065674],"genre_scores_gemma":[0.9963909,0.00005229936,0.00031046182,0.00085971644,0.00014868376,0.0000051701963,0.00006860524,0.000017670365,0.0021465176],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99819595,0.00007791632,0.00038396072,0.00040941313,0.00048025153,0.00045252795],"domain_scores_gemma":[0.99908125,0.0000114129325,0.00021986439,0.0005316002,0.000041428397,0.00011444102],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00033248,0.00021404569,0.00021146274,0.000035245277,0.00024943758,0.00003899438,0.0006903055,0.0000844346,0.0035527877],"category_scores_gemma":[0.000020664156,0.00015893207,0.00011934219,0.00047909934,0.00051978364,0.00021477521,0.0003618304,0.00010996317,0.0013672308],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014919,0.00004002352,0.05084517,0.000007298059,0.000025428015,0.000001345661,0.0007384262,0.000011244289,0.9474286,0.000006967859,0.0005805765,0.00030004585],"study_design_scores_gemma":[0.00078267313,0.00025352862,0.52191794,0.000030784646,0.000058848702,0.000016417118,0.00016024653,0.00005189914,0.05916645,0.00008161639,0.41689086,0.00058874674],"about_ca_topic_score_codex":0.00018659185,"about_ca_topic_score_gemma":0.00008831055,"teacher_disagreement_score":0.8882621,"about_ca_system_score_codex":0.00024224905,"about_ca_system_score_gemma":0.000035492838,"threshold_uncertainty_score":0.99941033},"labels":[],"label_agreement":null},{"id":"W2798147267","doi":"10.1128/genomea.00249-18","title":"Draft Whole-Genome Sequence of the Fluorene-Degrading Sphingobium sp. Strain LB126, Isolated from Polycyclic Aromatic Hydrocarbon-Contaminated Soil","year":2018,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Fluorene; Strain (injury); Whole genome sequencing; Polycyclic aromatic hydrocarbon; Protocatechuic acid; Biology; Bacteria; Biodegradation; Gene; Genome; Chemistry; Microbiology; Biochemistry; Genetics; Environmental chemistry; Organic chemistry","score_opus":0.014552149028673585,"score_gpt":0.2193600668446342,"score_spread":0.2048079178159606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2798147267","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954781,0.00005674591,0.00008342963,0.00028162633,0.00056111015,0.00044533183,0.001131711,0.000055904304,0.0019060696],"genre_scores_gemma":[0.997234,0.0000197208,0.00018131793,0.0006583553,0.00010849667,0.000006211235,0.0005443528,0.00002717194,0.001220406],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99752384,0.00011590183,0.00062816095,0.0005571393,0.0005963849,0.0005785813],"domain_scores_gemma":[0.99876887,0.000025145417,0.0004228105,0.0006144583,0.000015335387,0.0001533735],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003437704,0.00032107387,0.00030774006,0.00006230244,0.0002948133,0.00006576401,0.0008638098,0.00014391133,0.0014983949],"category_scores_gemma":[0.000037279264,0.00024968642,0.000112567155,0.000674187,0.0005385139,0.00025127016,0.00033502304,0.00017765597,0.0014664738],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027323382,0.000080596816,0.010911107,0.0000054227444,0.000051549116,0.0000034656173,0.0017361661,0.000015998838,0.9864931,0.0000010816592,0.00014183497,0.00053231925],"study_design_scores_gemma":[0.005527269,0.0013239171,0.6398839,0.00038267157,0.00033313048,0.000027942353,0.001679217,0.007364833,0.26820114,0.0015354598,0.07103249,0.0027080574],"about_ca_topic_score_codex":0.0015909912,"about_ca_topic_score_gemma":0.00056031917,"teacher_disagreement_score":0.718292,"about_ca_system_score_codex":0.00033482883,"about_ca_system_score_gemma":0.00004899145,"threshold_uncertainty_score":0.9999955},"labels":[],"label_agreement":null},{"id":"W2800211080","doi":"","title":"Oxydation chimique des hydrocarbures aromatiques polycycliques dans les concentrés issus de la décontamination de sols pollués.","year":2016,"lang":"fr","type":"article","venue":"EspaceINRS Institutional Digital Repository (Institut National de la Recherche Scientifique)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Geology","score_opus":0.048957304896423436,"score_gpt":0.3105875247382904,"score_spread":0.26163021984186696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2800211080","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6679063,0.0009422269,0.08125861,0.004230139,0.0009910584,0.0007381113,0.00055212626,0.00026599327,0.24311547],"genre_scores_gemma":[0.95024794,0.0010967181,0.01512786,0.00034496852,0.00041675242,0.00005668475,0.00010710942,0.000038683178,0.032563303],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9933749,0.002867044,0.00078178034,0.0009191184,0.0011912596,0.0008659333],"domain_scores_gemma":[0.99599415,0.0024023545,0.00043572183,0.00029548295,0.00030439577,0.000567898],"candidate_categories":["metaepi_narrow","sts","scholarly_communication","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0052429484,0.00054594333,0.00032874595,0.0002720303,0.0010531996,0.001169239,0.00066144706,0.0013282481,0.00026931605],"category_scores_gemma":[0.008204952,0.0004888812,0.00029258896,0.00069495,0.006475305,0.0029126178,0.00021632877,0.0007349934,0.00020744381],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012375895,0.0006130109,0.04164934,0.00010791211,0.00010185161,0.000096591524,0.0027431892,0.0013636966,0.85209936,0.06783286,0.0042596254,0.029008828],"study_design_scores_gemma":[0.0013554686,0.0001090905,0.22503711,0.0015005646,0.0000789819,0.0010805253,0.00029935144,0.0029392452,0.61534977,0.035473634,0.11574745,0.001028777],"about_ca_topic_score_codex":0.0009659441,"about_ca_topic_score_gemma":0.0005688921,"teacher_disagreement_score":0.28234166,"about_ca_system_score_codex":0.013007929,"about_ca_system_score_gemma":0.0036477325,"threshold_uncertainty_score":0.99996823},"labels":[],"label_agreement":null},{"id":"W2801513845","doi":"10.1016/j.ibiod.2018.04.009","title":"Biosurfactant enhanced soil bioremediation of petroleum hydrocarbons: Design of experiments (DOE) based system optimization and phospholipid fatty acid (PLFA) based microbial community analysis","year":2018,"lang":"en","type":"article","venue":"International Biodeterioration & Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bioremediation; Microorganism; Biodegradation; Nutrient; Microbial population biology; Biomass (ecology); Factorial experiment; Chemistry; Biostimulation; Environmental chemistry; Rhamnolipid; Fatty acid methyl ester; Fatty acid; Hydrocarbon; Soil water; Bacteria; Food science; Biology; Agronomy; Organic chemistry; Ecology; Biodiesel","score_opus":0.01837213374135249,"score_gpt":0.2364447255009282,"score_spread":0.21807259175957572,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2801513845","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5889516,0.0000105292565,0.40995765,0.00011302453,0.00030773674,0.000304816,0.00020741786,0.000047553458,0.00009964938],"genre_scores_gemma":[0.965198,0.000017078835,0.03342737,0.00012463603,0.00004697997,0.000017475799,0.001142116,0.000017320719,0.000009057135],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99728507,0.0004255321,0.0009698191,0.00043788593,0.0006652185,0.000216468],"domain_scores_gemma":[0.9981304,0.00008559473,0.0010792047,0.00038249476,0.00022338289,0.00009895215],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008122728,0.00029526156,0.00037584556,0.00043466437,0.00020742248,0.00008029087,0.0003574833,0.00020134651,0.00046354084],"category_scores_gemma":[0.00011664504,0.00028518133,0.00013424823,0.00085253204,0.0004239259,0.00048303377,0.00009233535,0.00011888067,0.00002845151],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033040062,0.00021521443,0.0091990875,0.000020721864,0.000097830714,1.9875174e-7,0.00029160152,0.016460165,0.97271276,0.0000068847357,0.000038560138,0.0006265519],"study_design_scores_gemma":[0.0007730454,0.00020444056,0.006644662,0.000034753084,0.00009507239,5.0843306e-7,0.00010561177,0.34754834,0.64439887,0.0000028772927,0.000016603624,0.00017524743],"about_ca_topic_score_codex":0.0005883777,"about_ca_topic_score_gemma":0.00020203399,"teacher_disagreement_score":0.3765303,"about_ca_system_score_codex":0.0003621068,"about_ca_system_score_gemma":0.00006972236,"threshold_uncertainty_score":0.99996},"labels":[],"label_agreement":null},{"id":"W2802124425","doi":"10.1080/15226514.2017.1393389","title":"The fate of DDT in soils treated with hydroxypropyl-β-cyclodextrin (HPβCD)","year":2018,"lang":"en","type":"article","venue":"International Journal of Phytoremediation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University; Royal Military College of Canada","funders":"","keywords":"Environmental chemistry; Bioavailability; Chemistry; Environmental remediation; Soil water; Phytoremediation; Pesticide; Contamination; Soil contamination; Triclocarban; Eisenia fetida; Environmental science; Agronomy; Ecology; Triclosan; Toxicity; Biology; Soil science","score_opus":0.006253181138741226,"score_gpt":0.22962970669110047,"score_spread":0.22337652555235923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2802124425","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99737406,0.000019047468,0.00015727198,0.00064195134,0.00048086268,0.00008696125,0.0000068172503,0.000004243081,0.0012287882],"genre_scores_gemma":[0.9991287,0.000091812144,0.0002820863,0.00008158967,0.00031340306,9.48218e-7,0.000004497515,0.0000063959837,0.00009055607],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998603,0.000055669396,0.00047080975,0.00009837413,0.0006471086,0.00012506684],"domain_scores_gemma":[0.99901813,0.00006767242,0.0005963918,0.00008410219,0.00018521454,0.000048481346],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046966167,0.00008629698,0.000112992435,0.00008936788,0.000035985508,0.000026894753,0.0003531816,0.000042569034,0.00028739372],"category_scores_gemma":[0.00011799011,0.000052079155,0.000046719204,0.00020808575,0.00020082646,0.00025376375,0.000040323062,0.00010005293,0.000053419517],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007835575,0.00018863437,0.5538525,0.0000026136424,0.000071380244,0.000017297472,0.00067917904,0.00027321937,0.41446522,0.00006925733,0.0020607326,0.027536385],"study_design_scores_gemma":[0.0019978837,0.00047131922,0.6345918,0.000067684225,0.000016825807,0.00003026204,0.0001047594,0.0012387605,0.35306868,0.00039934908,0.007859901,0.00015279694],"about_ca_topic_score_codex":0.00008049501,"about_ca_topic_score_gemma":0.000554925,"teacher_disagreement_score":0.08073927,"about_ca_system_score_codex":0.00018880604,"about_ca_system_score_gemma":0.000036183053,"threshold_uncertainty_score":0.31467596},"labels":[],"label_agreement":null},{"id":"W2802979866","doi":"10.1016/s1002-0160(18)60018-9","title":"Biosurfactants as a Biological Tool to Increase Micronutrient Availability in Soil: A Review","year":2018,"lang":"en","type":"review","venue":"Pedosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":94,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Nutrient; Bioremediation; Micronutrient; Agriculture; Soil water; Environmental science; Biotechnology; Environmental chemistry; Biology; Chemistry; Ecology; Contamination; Soil science","score_opus":0.03479464975038082,"score_gpt":0.3064053827583341,"score_spread":0.2716107330079533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2802979866","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.013106481,0.97996247,0.0000011311193,0.00014271378,0.00022587288,0.002798019,0.00023391802,0.00007087039,0.0034585379],"genre_scores_gemma":[0.00012585611,0.99653834,0.0004563061,0.0016110045,0.00008027794,0.000088860754,0.0001114895,0.00003720917,0.0009506501],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99595815,0.0004646634,0.0012488362,0.0012616153,0.00039401947,0.0006727133],"domain_scores_gemma":[0.998281,0.00010438733,0.00039192717,0.0008348554,0.0000239811,0.00036382859],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0011474234,0.00066015916,0.0016805469,0.000036648053,0.00007694722,0.000047293935,0.00082987203,0.00048715022,0.034675326],"category_scores_gemma":[0.00080469385,0.0004655333,0.0004252742,0.0011249222,0.00023845928,0.0000940305,0.0007654247,0.00039384584,0.047615383],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050364546,0.00064206927,0.0029861284,0.011638914,0.000038029455,0.000074010604,0.00006423193,2.2966351e-7,0.00017851041,0.0000040111113,0.1251288,0.8591947],"study_design_scores_gemma":[0.00016550698,0.00013458171,0.000286189,0.01115298,0.00008182883,0.000027489401,0.0000050543863,5.0909404e-7,0.00002008856,0.00001202003,0.98747927,0.0006344996],"about_ca_topic_score_codex":0.0006753263,"about_ca_topic_score_gemma":0.00060664525,"teacher_disagreement_score":0.86235046,"about_ca_system_score_codex":0.00063235103,"about_ca_system_score_gemma":0.00016605068,"threshold_uncertainty_score":0.99977964},"labels":[],"label_agreement":null},{"id":"W2804667349","doi":"10.4238/gmr16039916","title":"Research Article Genetic expression of pobA and fabHB in Bacillus licheniformis M2-7 in the presence of benzo[a]pyrene","year":2018,"lang":"en","type":"article","venue":"Genetics and Molecular Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Consejo Nacional de Ciencia y Tecnología","keywords":"Bacillus licheniformis; Pyrene; Chemistry; Benzo(a)pyrene; Food science; Molecular biology; Biology; Genetics; Organic chemistry; Bacillus subtilis; Bacteria","score_opus":0.03868366195655587,"score_gpt":0.3353654801019821,"score_spread":0.2966818181454262,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2804667349","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979025,0.0005453176,0.000020727459,0.0003142771,0.00000891463,0.00029617077,0.000010033107,8.9658704e-7,0.0009011477],"genre_scores_gemma":[0.9987306,0.0006871585,0.0005040717,0.000028068309,0.000007887493,0.000005412379,8.998382e-7,0.000005212782,0.000030699735],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982135,0.0003457866,0.00020988344,0.00023946623,0.00066958414,0.00032172923],"domain_scores_gemma":[0.99944806,0.00008571312,0.000034256365,0.00030581994,0.000054908636,0.00007122905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017986902,0.000061168765,0.00009003156,0.00008675635,0.00009369302,0.00003406241,0.0003295509,0.00006912453,0.00012293458],"category_scores_gemma":[0.0001552043,0.000044800414,0.000011449773,0.0004215969,0.0010447896,0.0000306381,0.0005489461,0.00017902932,0.000008337561],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027754608,0.00006130811,0.04133537,0.000012891062,9.575383e-7,0.00000398599,0.0009086008,0.0000069019366,0.94944376,0.000014639237,0.00029931328,0.007884519],"study_design_scores_gemma":[0.00028863963,0.00024165842,0.22940964,0.00002242465,7.9142774e-7,0.0000013560268,0.00038154382,0.000489072,0.7682875,0.0003510303,0.00047944984,0.00004689641],"about_ca_topic_score_codex":0.0006774245,"about_ca_topic_score_gemma":0.00058517064,"teacher_disagreement_score":0.18807426,"about_ca_system_score_codex":0.00001940594,"about_ca_system_score_gemma":0.000018614826,"threshold_uncertainty_score":0.38495705},"labels":[],"label_agreement":null},{"id":"W2804820596","doi":"10.7939/r39z90j97","title":"Biodegradation of Fat, Oil, and Grease (FOG) in Wet Wells","year":2014,"lang":"en","type":"article","venue":"University of Alberta Library","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Grease; Biodegradation; Environmental science; Petroleum; Waste management; Petroleum engineering; Environmental chemistry; Environmental engineering; Chemistry; Geology; Engineering","score_opus":0.003934050136111396,"score_gpt":0.14544257990140516,"score_spread":0.14150852976529377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2804820596","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96900445,0.000004083408,0.0000053431904,0.0006277748,0.00001463497,0.000020512995,0.0000050992267,0.000004026218,0.030314047],"genre_scores_gemma":[0.99502397,0.00006671144,0.00064243306,0.00008387917,0.000003305662,6.662058e-9,0.000019441184,0.0000020561008,0.0041581835],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99968904,0.000030186753,0.00006560812,0.000099835,0.000057321933,0.000058011065],"domain_scores_gemma":[0.9997866,0.00003819931,0.00005728878,0.00007400253,0.0000012614994,0.00004265455],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000030681258,0.000041929663,0.000072437484,0.000036074725,0.000016590204,0.000002780145,0.00009358049,0.000036923335,0.0020629659],"category_scores_gemma":[0.000008502982,0.000043580847,0.00001602275,0.00010747798,0.00011615672,0.00032203403,0.00009011939,0.000025676996,0.000047740137],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008789034,0.00010432073,0.93172306,0.000027940105,0.0000054734237,0.0000016061972,0.0015350988,0.000015449834,0.045300324,0.00040930693,0.010292265,0.010497298],"study_design_scores_gemma":[0.0016778115,0.00013248847,0.8171268,0.000060046055,0.00001714478,0.0000014475486,0.0004732117,0.0013525152,0.047262724,0.00021722003,0.1314104,0.00026816287],"about_ca_topic_score_codex":0.0023986136,"about_ca_topic_score_gemma":0.0006313896,"teacher_disagreement_score":0.12111814,"about_ca_system_score_codex":0.000006347551,"about_ca_system_score_gemma":0.000004318177,"threshold_uncertainty_score":0.9988493},"labels":[],"label_agreement":null},{"id":"W2806773722","doi":"10.1007/s11274-018-2469-9","title":"Biotransformation of benzo[a]pyrene by the thermophilic bacterium Bacillus licheniformis M2-7","year":2018,"lang":"en","type":"article","venue":"World Journal of Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Consejo Nacional de Ciencia y Tecnología; Secretaría de Educación Pública; U.S. Environmental Protection Agency","keywords":"Biotransformation; Bacillus licheniformis; Thermophile; Pyrene; Chemistry; Bacteria; Phthalic acid; Mesophile; Biocatalysis; Biochemistry; Enzyme; Food science; Stereochemistry; Organic chemistry; Biology; Bacillus subtilis; Reaction mechanism","score_opus":0.0051699180288806755,"score_gpt":0.1936892760389556,"score_spread":0.18851935801007494,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2806773722","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9905881,0.0003964968,0.000090266665,0.008025471,0.00020492318,0.00009881458,0.000045111326,0.000010907459,0.00053988764],"genre_scores_gemma":[0.9984673,0.0004819264,0.00025158844,0.0005683722,0.0000400554,3.2532682e-7,0.000007423658,0.0000047832423,0.0001782192],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991011,0.000068919406,0.00044849812,0.00012806639,0.000049856444,0.00020357956],"domain_scores_gemma":[0.99936086,0.000036279715,0.00039347878,0.00014014503,0.000031293283,0.000037949994],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004189749,0.00012459733,0.00021916232,0.000109963854,0.000105606516,0.0000069132243,0.00032943525,0.0002596612,0.0010208697],"category_scores_gemma":[0.000023444605,0.00007278054,0.00006126836,0.0002993592,0.0014637685,0.00008469357,0.000095267584,0.00024971407,0.000057219368],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000073885385,0.00003462369,0.0012226223,0.0000034699917,0.000026289943,7.532108e-7,0.00012971384,2.0301944e-7,0.97491866,0.000057002984,0.004713467,0.018819291],"study_design_scores_gemma":[0.0003930704,0.0004067659,0.0023281197,0.000010708638,0.000020000702,0.00027260894,0.000056370915,0.0000034857555,0.84886456,0.00009095869,0.14746714,0.00008620883],"about_ca_topic_score_codex":0.000018242066,"about_ca_topic_score_gemma":0.00020975995,"teacher_disagreement_score":0.14275366,"about_ca_system_score_codex":0.000033026023,"about_ca_system_score_gemma":0.0000133871645,"threshold_uncertainty_score":0.99989235},"labels":[],"label_agreement":null},{"id":"W2808469734","doi":"10.1101/345173","title":"Eight new genomes of organohalide-respiring <i>Dehalococcoides mccartyi</i> reveal evolutionary trends in reductive dehalogenase enzymes","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Strategic Environmental Research and Development Program; Ontario Genomics Institute; Government of Ontario; Ontario Genomics; Genome Canada; Government of Canada; U.S. Department of Defense","keywords":"Dehalogenase; Dehalococcoides; Genome; Biology; Synteny; Genetics; Gene; Chemistry; Vinyl chloride","score_opus":0.012827950875232589,"score_gpt":0.21577587304297258,"score_spread":0.20294792216774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2808469734","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962752,0.0013313087,0.00004198618,0.00028863153,0.00084071246,0.0005002086,0.0004798224,0.0001221202,0.000119999],"genre_scores_gemma":[0.99331105,0.00023868518,0.0056187897,0.00016765509,0.0004659581,0.00002504614,0.000002819857,0.00008675244,0.00008327104],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962579,0.00021773757,0.00097471685,0.0012736741,0.0005785294,0.0006974146],"domain_scores_gemma":[0.997698,0.000054539138,0.0007046085,0.0010459877,0.00011944139,0.00037742918],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00062351587,0.00063597347,0.0007112705,0.00043608237,0.00012377891,0.000069126734,0.0008241272,0.0005878373,0.002075466],"category_scores_gemma":[0.00015259252,0.00064866967,0.0002096529,0.0012449494,0.00050938356,0.0002757236,0.0010008034,0.00054319925,0.00031184574],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005786024,0.00016938335,0.072357185,0.000057729936,0.000052963136,0.000029403674,0.000056493398,0.000079443664,0.91616225,0.000027928781,0.010923243,0.0000260926],"study_design_scores_gemma":[0.00047601407,0.00006105444,0.35987413,0.00016334797,0.000050366678,5.5174734e-8,0.000005206944,0.000031464166,0.6329073,0.0000065485865,0.0057943026,0.0006302311],"about_ca_topic_score_codex":0.0005724497,"about_ca_topic_score_gemma":0.00007728173,"teacher_disagreement_score":0.28751695,"about_ca_system_score_codex":0.0009003679,"about_ca_system_score_gemma":0.0003530916,"threshold_uncertainty_score":0.9995965},"labels":[],"label_agreement":null},{"id":"W2809047257","doi":"10.1016/j.chemosphere.2018.06.126","title":"Indigenous microorganisms residing in oil sands tailings biodegrade residual bitumen","year":2018,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; China Scholarship Council","keywords":"Tailings; Biostimulation; Oil sands; Asphalt; Environmental chemistry; Biodegradation; Microbial biodegradation; Microbial consortium; Microbial enhanced oil recovery; Total petroleum hydrocarbon; Environmental science; Waste management; Bioremediation; Pulp and paper industry; Chemistry; Geology; Microorganism; Contamination; Biology; Ecology; Bacteria; Organic chemistry; Materials science","score_opus":0.007081513933002551,"score_gpt":0.21212465167983105,"score_spread":0.2050431377468285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2809047257","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9881043,0.000074276104,0.000004491078,0.00040792188,0.00013449043,0.000073414776,0.000007140064,0.000056878453,0.011137078],"genre_scores_gemma":[0.99304736,0.0000688264,0.0019349665,0.00057747186,0.00012159478,0.000001965173,0.0000129787195,0.000019208599,0.0042156084],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99875265,0.000026805194,0.0002488498,0.00037348567,0.00020167677,0.00039653954],"domain_scores_gemma":[0.999565,0.000014783803,0.000081667924,0.00022764217,0.0000096678095,0.000101208985],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002361099,0.00016035474,0.00014698746,0.00001401795,0.00013582884,0.0000454965,0.00028462434,0.00015102541,0.007256061],"category_scores_gemma":[0.00003775594,0.00014494937,0.00003045736,0.00041358045,0.00023147733,0.00012607886,0.00015343021,0.0001394404,0.0022477708],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021661896,0.000048140155,0.05725644,0.0000065394765,0.0000032270564,0.000008596813,0.0018651397,9.577085e-7,0.9230426,0.0000014745452,0.00815497,0.009590258],"study_design_scores_gemma":[0.00048736847,0.000053310378,0.016691912,0.000020612406,0.0000042795978,0.000006668466,0.00024229621,0.000013065056,0.9615109,0.00006641688,0.020671295,0.00023187356],"about_ca_topic_score_codex":0.00053405913,"about_ca_topic_score_gemma":0.0012241409,"teacher_disagreement_score":0.04056453,"about_ca_system_score_codex":0.00021408296,"about_ca_system_score_gemma":0.000030977473,"threshold_uncertainty_score":0.9985291},"labels":[],"label_agreement":null},{"id":"W2876758001","doi":"10.3390/microorganisms6030065","title":"Stable Isotope and Metagenomic Profiling of a Methanogenic Naphthalene-Degrading Enrichment Culture","year":2018,"lang":"en","type":"article","venue":"Microorganisms","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Metagenomics; Stable-isotope probing; Naphthalene; Methanogenesis; Metabolite; Enrichment culture; Biodegradation; Chemistry; Environmental chemistry; Anoxic waters; Microbial biodegradation; Microbial metabolism; Biochemistry; Biology; Bacteria; Gene; Methane; Organic chemistry; Microorganism; Genetics","score_opus":0.009894405675342749,"score_gpt":0.2208587402708753,"score_spread":0.21096433459553254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2876758001","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99728906,0.00023646677,0.00018622223,0.000051521725,0.00011699749,0.0002416205,0.00002732807,0.000025354346,0.0018254096],"genre_scores_gemma":[0.9855391,0.000074372496,0.013058884,0.00018570639,0.000040237614,0.0000018639706,0.000007570022,0.000014731752,0.0010775507],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99903995,0.00004234752,0.00023225808,0.00030386107,0.00014192371,0.00023965692],"domain_scores_gemma":[0.9996016,0.000010358734,0.00011808069,0.00017114368,0.000016154461,0.00008268625],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00026413615,0.00014315962,0.00017369281,0.000031089963,0.000107833344,0.000024762947,0.00017082115,0.00007735233,0.0026887297],"category_scores_gemma":[0.000016749844,0.00011540321,0.000040318482,0.00021550666,0.0001964127,0.000102666,0.00018164208,0.00006782598,0.0003563785],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009737299,0.00002387797,0.008192608,0.000008721904,0.000018541114,0.0000011023589,0.0008630696,6.222402e-7,0.9896379,0.000023256458,0.0006625409,0.0005580396],"study_design_scores_gemma":[0.00025332908,0.00009926343,0.004023295,0.0000068024,0.000024552905,0.000013509318,0.00016039929,0.000015245743,0.98931366,0.00006246456,0.005881884,0.00014559789],"about_ca_topic_score_codex":0.00007642464,"about_ca_topic_score_gemma":0.000034808425,"teacher_disagreement_score":0.012872661,"about_ca_system_score_codex":0.000108455024,"about_ca_system_score_gemma":0.00001621034,"threshold_uncertainty_score":0.99822295},"labels":[],"label_agreement":null},{"id":"W2884499025","doi":"10.1002/cjce.23297","title":"Investigation of growth kinetics of <i>Debaryomyces hansenii</i> (LAF‐3 10 U) in petroleum refinery desalter effluent","year":2018,"lang":"en","type":"article","venue":"The Canadian Journal of Chemical Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Debaryomyces hansenii; Effluent; Yeast; Phenols; Chemistry; Phenol; Substrate (aquarium); Refinery; Wastewater; Chromatography; Environmental chemistry; Pulp and paper industry; Environmental engineering; Environmental science; Organic chemistry; Biology; Ecology; Biochemistry; Engineering","score_opus":0.007852551751120804,"score_gpt":0.16969690486491415,"score_spread":0.16184435311379336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2884499025","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992149,0.000033513945,0.000031780248,0.0004391775,0.00008554832,0.000028295786,0.0000045225993,0.0000017022842,0.00016057357],"genre_scores_gemma":[0.9992913,0.0000023775192,0.0005455377,0.00007827333,0.00005902753,1.960784e-7,0.0000010328845,0.0000064102724,0.000015822097],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992952,0.000014215853,0.0003337952,0.000057054116,0.0001527418,0.00014698929],"domain_scores_gemma":[0.99955,0.00003497594,0.00014013873,0.00007512118,0.000034908742,0.00016484968],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021416921,0.00007122074,0.00012845616,0.000065890956,0.00000977232,0.0000070847614,0.00019734263,0.000048890608,0.00022519645],"category_scores_gemma":[0.0001289082,0.00005275408,0.000038202397,0.0001788002,0.00019677753,0.000057110323,0.00001645099,0.00011433029,0.0000068098298],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009390568,0.0000032559471,0.00681128,0.0000108400845,0.000004657328,0.0000019381432,0.00020711563,0.0005717285,0.99183846,0.00001110964,0.00046423686,0.00006600556],"study_design_scores_gemma":[0.00018167094,0.000049991853,0.0068663196,0.00005882179,0.000007424145,0.00001235111,0.0000047211906,0.00072846626,0.99163103,0.000036130386,0.0003641564,0.000058919726],"about_ca_topic_score_codex":0.00094263186,"about_ca_topic_score_gemma":0.0010468104,"teacher_disagreement_score":0.00051375746,"about_ca_system_score_codex":0.00012509884,"about_ca_system_score_gemma":0.000043360058,"threshold_uncertainty_score":0.24657431},"labels":[],"label_agreement":null},{"id":"W2884707276","doi":"10.1039/c8ra03377c","title":"Isolation of nitrate-reducing bacteria from an offshore reservoir and the associated biosurfactant production","year":2018,"lang":"en","type":"article","venue":"RSC Advances","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Suncor Energy Incorporated","keywords":"Isolation (microbiology); Nitrate; Bacteria; Submarine pipeline; Environmental science; Production (economics); Chemistry; Petroleum engineering; Microbiology; Biology; Geology; Oceanography; Organic chemistry","score_opus":0.011654959773097655,"score_gpt":0.24492359299619104,"score_spread":0.23326863322309338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2884707276","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983738,0.00006976251,0.000032224794,0.00053318165,0.0002826495,0.0001636365,0.000032523643,0.000021663958,0.0004905773],"genre_scores_gemma":[0.99854887,0.00011820701,0.0010503773,0.000059534406,0.000094938456,0.0000013373236,0.000032408458,0.000005577189,0.00008875475],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991817,0.00011498791,0.00019918387,0.00023223713,0.00015413786,0.00011775269],"domain_scores_gemma":[0.99956036,0.000036983336,0.00018591089,0.0001543229,0.000026020776,0.000036409936],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003405014,0.00008507866,0.00011682106,0.000013193498,0.00013467779,0.000023453833,0.000105814914,0.0000463799,0.0006633736],"category_scores_gemma":[0.00013991397,0.000054446158,0.000017857956,0.0001666824,0.00044954673,0.00046412722,0.000045225686,0.000050712046,0.000030111976],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014755216,0.000034390785,0.050027985,0.0000021196124,0.000007561709,1.0160146e-7,0.0010606365,0.000028257471,0.9463088,0.000008366667,0.00020677302,0.0021674861],"study_design_scores_gemma":[0.00073776534,0.00016679967,0.47379878,0.000036044134,0.000024099028,0.0000010738031,0.00048571537,0.0016100374,0.51978,0.0010111216,0.00216344,0.00018514931],"about_ca_topic_score_codex":0.00043955326,"about_ca_topic_score_gemma":0.0014728132,"teacher_disagreement_score":0.4265288,"about_ca_system_score_codex":0.000035280365,"about_ca_system_score_gemma":0.0000070512183,"threshold_uncertainty_score":0.72634757},"labels":[],"label_agreement":null},{"id":"W2885056215","doi":"10.11159/icepr18.129","title":"Anaerobic Intrinsic Bioremediation of Benzene in the Presence of Salinity","year":2018,"lang":"en","type":"article","venue":"Proceedings of the World Congress on New Technologies","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Bioremediation; Salinity; Benzene; Anaerobic exercise; Environmental science; Environmental chemistry; Computer science; Biochemical engineering; Chemistry; Contamination; Engineering; Ecology; Biology; Organic chemistry","score_opus":0.014902981026772986,"score_gpt":0.23815844082922746,"score_spread":0.22325545980245448,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2885056215","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99492455,0.000021696018,4.205448e-7,0.002947419,0.00016245696,0.00030050968,0.0000054724387,0.000042763848,0.0015947222],"genre_scores_gemma":[0.9992356,0.00005599626,0.00046179522,0.000060632006,0.000013678211,0.0000034161249,3.397091e-7,0.000004148485,0.0001643975],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999011,0.000010071109,0.00032659696,0.00017790022,0.00032646034,0.0001480046],"domain_scores_gemma":[0.99919516,0.00007682514,0.00046605978,0.00020754786,0.00004216922,0.000012213787],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035817968,0.00010452792,0.00016726936,0.00012628005,0.000039332408,0.000009561604,0.0011034788,0.00007784562,0.00005226916],"category_scores_gemma":[0.0005980032,0.000059026035,0.000045324326,0.0011609852,0.0009203894,0.00011695644,0.00033395088,0.00014476012,0.000008276627],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008061231,0.00011534733,0.2320546,0.00002614037,0.0000083787645,1.0029333e-7,0.0003738065,0.0000033793192,0.73666054,0.0018839565,0.010566164,0.018226994],"study_design_scores_gemma":[0.00020128243,0.000113758004,0.105382085,0.000081279315,0.000006899036,3.7926736e-7,0.00035590425,0.000018026782,0.8911733,0.0016451614,0.0009601528,0.00006176115],"about_ca_topic_score_codex":0.00012384953,"about_ca_topic_score_gemma":0.0005588729,"teacher_disagreement_score":0.1545128,"about_ca_system_score_codex":0.000033826054,"about_ca_system_score_gemma":0.000012153357,"threshold_uncertainty_score":0.3391213},"labels":[],"label_agreement":null},{"id":"W2886374366","doi":"10.1007/s11270-018-3949-0","title":"Treatment of Waters Contaminated by Phenol and Cresols in Circulating Packed Bed Bioreactors—Biodegradation and Toxicity Evaluations","year":2018,"lang":"en","type":"article","venue":"Water Air & Soil Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; China Scholarship Council","keywords":"Phenol; Chemistry; Biodegradation; Effluent; Cresol; Toxicity; Bioreactor; p-Cresol; Chromatography; Nuclear chemistry; Environmental chemistry; Environmental engineering; Organic chemistry","score_opus":0.01108870274320881,"score_gpt":0.23709724883539893,"score_spread":0.22600854609219012,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2886374366","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989249,0.000012886969,0.00004282048,0.00047389447,0.000045181252,0.00027616374,0.00005082544,0.000016154909,0.00015718877],"genre_scores_gemma":[0.9996403,0.000020910275,0.0000720644,0.000059909777,0.000014315355,0.000005031058,0.00011259201,0.0000057805387,0.00006913791],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991501,0.0000797384,0.00023060264,0.00022489321,0.0001336842,0.00018096072],"domain_scores_gemma":[0.999764,0.000009158996,0.00006875718,0.00008968215,0.000013844957,0.00005452025],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015121282,0.000115360686,0.0001253197,0.000044187924,0.000088320834,0.000014493253,0.00003322679,0.00007252862,0.00012925631],"category_scores_gemma":[0.000012554992,0.00008039112,0.000018015513,0.00009568808,0.00023482759,0.00016498614,0.000029781077,0.000024500161,0.000031163152],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024418276,0.00007879124,0.04970992,0.0000029600674,0.0000053249355,3.0638463e-7,0.0026315802,0.0000035536732,0.93953276,0.0000023332602,0.000046000558,0.007962081],"study_design_scores_gemma":[0.0009275732,0.00020369033,0.18760018,0.000008125398,0.00001531677,0.0000020198129,0.00011535634,0.0012692596,0.80956995,0.00003397688,0.0001522115,0.00010232351],"about_ca_topic_score_codex":0.0013695043,"about_ca_topic_score_gemma":0.00052440376,"teacher_disagreement_score":0.13789026,"about_ca_system_score_codex":0.00018954498,"about_ca_system_score_gemma":0.000005510525,"threshold_uncertainty_score":0.32782546},"labels":[],"label_agreement":null},{"id":"W2886852914","doi":"10.1111/1751-7915.13303","title":"Rhizoremediation of petroleum hydrocarbons: a model system for plant microbiome manipulation","year":2018,"lang":"en","type":"review","venue":"Microbial Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":149,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Espace pour la vie; Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Phytoremediation; Environmental remediation; Environmental science; Biochemical engineering; Rhizosphere; Abiotic component; Environmental chemistry; Contamination; Biology; Chemistry; Soil water; Ecology; Soil science; Engineering; Bacteria","score_opus":0.028474030898272936,"score_gpt":0.25240131914618286,"score_spread":0.22392728824790992,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2886852914","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00279312,0.96588314,0.009702375,0.00029353815,0.0038595663,0.0076749073,0.008199167,0.0009562704,0.0006379191],"genre_scores_gemma":[0.0034631009,0.985464,0.006404829,0.00005808318,0.00031168596,0.000106620064,0.0036820157,0.00013984779,0.0003698577],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99709684,0.00008085581,0.0012349231,0.0008630792,0.00017779916,0.00054653466],"domain_scores_gemma":[0.9980405,0.000056206372,0.0011976174,0.00060817954,0.000020626949,0.00007687065],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00041262966,0.0005610993,0.0014126141,0.00042848877,0.00011702437,0.000022765831,0.0007501244,0.0018441622,0.00008544038],"category_scores_gemma":[0.000057013393,0.0004909119,0.00048431117,0.00052946113,0.0004416464,0.000079530546,0.00032449854,0.000287551,0.0005332931],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016027872,0.00036048648,0.000010998952,0.016062563,0.00036101203,0.00001018743,0.00013264973,0.000044422275,0.7691766,0.00070017565,0.041759174,0.17122142],"study_design_scores_gemma":[0.00054808875,0.00017728072,6.3653675e-7,0.0019389895,0.0004596234,0.000108343906,0.00001019754,0.0015640799,0.031119214,0.000031971336,0.9633926,0.0006489441],"about_ca_topic_score_codex":0.000059927082,"about_ca_topic_score_gemma":0.00010872106,"teacher_disagreement_score":0.9216335,"about_ca_system_score_codex":0.0007193272,"about_ca_system_score_gemma":0.00010290308,"threshold_uncertainty_score":0.99975425},"labels":[],"label_agreement":null},{"id":"W2887269168","doi":"10.1016/j.jbiotec.2018.07.039","title":"Bench-scale production of enzymes from the hydrocarbonoclastic bacteria Alcanivorax borkumensis and biodegradation tests","year":2018,"lang":"en","type":"article","venue":"Journal of Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cegep de Sainte Foy; TechnoRem (Canada); Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biodegradation; Bacteria; Chemistry; Enzyme; Biology; Biochemistry; Organic chemistry","score_opus":0.0058763927816145685,"score_gpt":0.19875703660813793,"score_spread":0.19288064382652337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2887269168","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993714,0.00008535532,0.00005465177,0.005625525,0.00040112803,0.000063439584,0.000011258929,0.000009194489,0.000035446486],"genre_scores_gemma":[0.99778897,0.00018378686,0.0017816249,0.00011284465,0.00010488793,1.9650233e-7,0.0000021745261,0.000003853841,0.000021638385],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99934316,0.000033785538,0.00028130325,0.0001243931,0.00011991171,0.00009744361],"domain_scores_gemma":[0.99943674,0.000031980046,0.00034517123,0.00013733972,0.000020909885,0.000027883203],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019456413,0.000072776515,0.00012890575,0.000048037316,0.000053696505,0.000009701104,0.0001532061,0.00013717651,0.00022767104],"category_scores_gemma":[0.00011785933,0.00004605335,0.000025868114,0.00020588371,0.0005292893,0.000101904756,0.00007214692,0.00011293091,0.000019827852],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023322928,0.0000246916,0.021284426,9.899744e-7,0.000011114202,5.043727e-7,0.00013217045,5.8033186e-7,0.96837044,0.000008851261,0.0025781407,0.007564792],"study_design_scores_gemma":[0.00014777726,0.00022580047,0.15645246,0.000013961144,0.000022449784,0.000030765874,0.00008801843,0.00003403529,0.8386474,0.00022299193,0.0040669953,0.0000473079],"about_ca_topic_score_codex":0.00010200794,"about_ca_topic_score_gemma":0.00039854346,"teacher_disagreement_score":0.13516803,"about_ca_system_score_codex":0.000039360664,"about_ca_system_score_gemma":0.000012538377,"threshold_uncertainty_score":0.24928382},"labels":[],"label_agreement":null},{"id":"W2888478183","doi":"10.3389/fmicb.2018.01926","title":"Endophytic Bacterial Community Structure and Function of Herbaceous Plants From Petroleum Hydrocarbon Contaminated and Non-contaminated Sites","year":2018,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Scarborough Hospital; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Contamination; Herbaceous plant; Soil contamination; Petroleum; Environmental science; Environmental chemistry; Biology; Botany; Ecology; Chemistry","score_opus":0.004315467490095269,"score_gpt":0.1780245815844827,"score_spread":0.17370911409438744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2888478183","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99847436,0.000111621266,0.000057767586,0.00002039005,0.00072714116,0.00016792835,0.0003248757,0.000012860865,0.000103067265],"genre_scores_gemma":[0.9988906,0.00004676223,0.0005333947,0.00011212287,0.000036657228,9.996612e-7,0.00032891336,0.000008720255,0.000041854604],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99901,0.00023263347,0.00024873373,0.00025297367,0.00003500959,0.0002206038],"domain_scores_gemma":[0.9995986,0.00004568344,0.00013934544,0.00015512353,0.0000112122,0.000050007442],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013865769,0.00016435012,0.00030526737,0.000060791015,0.00008274166,0.0000110315395,0.00013251971,0.00023122571,0.00038087304],"category_scores_gemma":[0.000027835335,0.00014756701,0.000015800555,0.000098530196,0.0006522528,0.00006946062,0.00014574565,0.0002078786,0.000010176187],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030015424,0.000027377977,0.19666998,0.0000054992774,0.000019404364,0.0000017900012,0.00046039323,4.89192e-7,0.79985684,1.5752371e-7,0.0011480574,0.0015098457],"study_design_scores_gemma":[0.0021020544,0.0005001579,0.59009486,0.000024332923,0.000024918994,0.000015478876,0.0003254531,0.0002580497,0.40508088,0.00010128074,0.0012575377,0.00021498742],"about_ca_topic_score_codex":0.0010508918,"about_ca_topic_score_gemma":0.002308461,"teacher_disagreement_score":0.394776,"about_ca_system_score_codex":0.00007244645,"about_ca_system_score_gemma":0.000008568779,"threshold_uncertainty_score":0.6017608},"labels":[],"label_agreement":null},{"id":"W2888851102","doi":"10.3390/molecules23092224","title":"High-Frequency Occurrence of Surfactin Monomethyl Isoforms in the Ferment Broth of a Bacillus subtilis Strain Revealed by Ion Trap Mass Spectrometry","year":2018,"lang":"en","type":"article","venue":"Molecules","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Population and Public Health; Magyar Tudományos Akadémia; Emberi Eroforrások Minisztériuma; Hungarian Scientific Research Fund; King Saud University","keywords":"Surfactin; Lipopeptide; Bacillus subtilis; Peptide; Chemistry; Residue (chemistry); Amino acid; Antimicrobial; Chromatography; Strain (injury); Mass spectrometry; Aspartic acid; Bacillales; Biochemistry; Stereochemistry; Biology; Bacteria; Organic chemistry","score_opus":0.009554495327722451,"score_gpt":0.2193997660795821,"score_spread":0.20984527075185963,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2888851102","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99764884,0.000043066182,0.00028894446,0.00025732588,0.00007121469,0.0002815493,0.00047191378,0.000008041423,0.0009291383],"genre_scores_gemma":[0.99777853,0.000051384442,0.001963108,0.00011074163,0.000010023209,0.0000035238884,0.00003993973,0.0000050998397,0.00003767002],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986783,0.00011091544,0.00037966206,0.0002485575,0.00033892936,0.00024359605],"domain_scores_gemma":[0.99943954,0.000039611212,0.00020305387,0.00025864132,0.00001312005,0.000046027555],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00048324198,0.00013894311,0.00019391162,0.000059091108,0.000036859114,0.000012367429,0.00037127765,0.00006968113,0.0015016044],"category_scores_gemma":[0.00005303169,0.000095781324,0.000056434936,0.0005200402,0.00032109022,0.00008816373,0.00004326343,0.00010002073,0.00004987028],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025440431,0.000117582815,0.024421867,0.000011753663,0.0000053134504,0.000001449285,0.0004924295,0.0000038436538,0.97257215,0.000030008552,0.00072232675,0.0015958179],"study_design_scores_gemma":[0.0004843382,0.00031015917,0.25894052,0.000020667903,0.000007921865,0.0000015126443,0.00027287722,0.000024914858,0.7392319,0.0003953384,0.00014680126,0.00016307102],"about_ca_topic_score_codex":0.0006383891,"about_ca_topic_score_gemma":0.0002304818,"teacher_disagreement_score":0.23451865,"about_ca_system_score_codex":0.00008719557,"about_ca_system_score_gemma":0.00001532491,"threshold_uncertainty_score":0.99941117},"labels":[],"label_agreement":null},{"id":"W2890761977","doi":"10.3389/fchem.2018.00403","title":"Cyclodextrin-Based Polymer-Supported Bacterium for the Adsorption and in-situ Biodegradation of Phenolic Compounds","year":2018,"lang":"en","type":"article","venue":"Frontiers in Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Global Institute for Water Security, University of Saskatchewan; University of Saskatchewan","keywords":"Chemistry; Biodegradation; Adsorption; Pentachlorophenol; Polymer; Cyclodextrin; Nuclear chemistry; Aqueous solution; Hydroquinone; Electrospray ionization; Organic chemistry","score_opus":0.008197293788467865,"score_gpt":0.21192313144700076,"score_spread":0.2037258376585329,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2890761977","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976147,0.000051290583,0.0009927594,0.00027428928,0.00014364939,0.00014607722,0.000024108802,0.0000072539547,0.0007458685],"genre_scores_gemma":[0.9986628,0.000017924716,0.0009991768,0.00009758939,0.0000312956,0.000005562027,0.000047056663,0.000004761682,0.00013381867],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994348,0.000010816679,0.00017846539,0.00015996827,0.00008779905,0.0001281046],"domain_scores_gemma":[0.9997353,0.000020452366,0.00008976419,0.00011961691,0.0000073784545,0.000027518527],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014036178,0.000075662465,0.00009453916,0.000018191411,0.00002674996,0.0000095296,0.00010950632,0.00009533505,0.0001550482],"category_scores_gemma":[0.00001768515,0.00006154489,0.000020654516,0.00015056676,0.00023951045,0.0000481027,0.000025609475,0.00006399333,0.000002881859],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000069657624,0.000032218733,0.1208295,0.000014126808,0.000002502322,9.577188e-8,0.00006830559,0.0000023687298,0.87474585,1.97875e-7,0.002028744,0.0022064333],"study_design_scores_gemma":[0.0005952292,0.0000127369185,0.09142226,0.000010633527,0.0000053094313,4.9903423e-7,0.00007221751,0.0018981199,0.9044801,0.000015882715,0.0014125489,0.00007445863],"about_ca_topic_score_codex":0.000046211808,"about_ca_topic_score_gemma":0.00008327502,"teacher_disagreement_score":0.02973425,"about_ca_system_score_codex":0.00007577795,"about_ca_system_score_gemma":0.000013650499,"threshold_uncertainty_score":0.25097275},"labels":[],"label_agreement":null},{"id":"W2892242347","doi":"10.1111/gwmr.12298","title":"Infiltration of Sulfate to Enhance Sulfate‐Reducing Biodegradation of Petroleum Hydrocarbons","year":2018,"lang":"en","type":"article","venue":"Groundwater Monitoring & Remediation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; American Petroleum Institute","keywords":"Sulfate; Biodegradation; Aquifer; Environmental remediation; Environmental chemistry; Infiltration (HVAC); Petroleum; Groundwater; Contamination; Environmental science; Environmental engineering; Chemistry; Geology; Geotechnical engineering; Ecology","score_opus":0.011612589604259763,"score_gpt":0.25394751528149523,"score_spread":0.24233492567723547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2892242347","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99463016,0.000007943761,0.003471255,0.00016043396,0.0010337884,0.00021958032,0.0000067764563,0.000038350703,0.00043173606],"genre_scores_gemma":[0.9970264,0.000022739949,0.002301157,0.000016096023,0.00038656182,0.0000073713873,0.00003616987,0.000014262407,0.00018923277],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99839777,0.00006308216,0.0005208826,0.00031275192,0.00045865818,0.00024687097],"domain_scores_gemma":[0.9992479,0.000029857943,0.0003185727,0.00025686907,0.000055893666,0.00009090792],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042047026,0.00015113775,0.00017839909,0.00012494341,0.00008562529,0.000026989954,0.00018201106,0.00009455121,0.00013987262],"category_scores_gemma":[0.000088985034,0.00014261543,0.000047816735,0.0004218628,0.00011411407,0.0003992524,0.00007322336,0.000072697956,0.00020195011],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038751514,0.000051744108,0.080184735,0.000010041995,0.0000071043614,1.5789271e-7,0.0010449988,0.0000823683,0.91057456,0.000004471477,0.00010441473,0.007896678],"study_design_scores_gemma":[0.00013434986,0.00019802475,0.1457771,0.000039729493,0.000012061189,5.4743583e-7,0.000059924834,0.00020368348,0.8529963,0.00003090592,0.00042079308,0.00012658047],"about_ca_topic_score_codex":0.0008721416,"about_ca_topic_score_gemma":0.000116709045,"teacher_disagreement_score":0.06559237,"about_ca_system_score_codex":0.00018422607,"about_ca_system_score_gemma":0.000017616867,"threshold_uncertainty_score":0.5815689},"labels":[],"label_agreement":null},{"id":"W2892448315","doi":"10.1016/j.jenvman.2018.09.045","title":"Polymer extraction and ex situ biodegradation of xenobiotic contaminated soil: Modelling of the process concept","year":2018,"lang":"en","type":"article","venue":"Journal of Environmental Management","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Istituto Superiore per la Protezione e la Ricerca Ambientale","keywords":"Biodegradation; Extraction (chemistry); Polymer; Partition coefficient; Chemistry; Sorption; Bioreactor; Chromatography; Bioremediation; Desorption; Environmental chemistry; Raffinate; Contamination; Chemical engineering; Materials science; Adsorption; Organic chemistry","score_opus":0.008152170488293703,"score_gpt":0.20519502955403668,"score_spread":0.19704285906574298,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2892448315","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977834,0.00008636462,0.0010409645,0.00011589515,0.00015034738,0.00016299242,0.000008924034,0.000001910456,0.0006491622],"genre_scores_gemma":[0.9991415,0.00013191134,0.0003190875,0.000061821935,0.000023595987,2.5963297e-7,0.000001664007,0.0000057498933,0.00031441732],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99903345,0.000039419472,0.00038716244,0.000112223024,0.00032840256,0.00009933493],"domain_scores_gemma":[0.9992645,0.0000109170505,0.0005749129,0.000103389546,0.000006248093,0.000040083505],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018620641,0.000091174115,0.00012727006,0.00003898982,0.000050455732,0.00000768431,0.00014713929,0.000038461018,0.00046796273],"category_scores_gemma":[0.0000029775808,0.00006339908,0.00004967296,0.00009454383,0.0003532056,0.00018860813,0.00008849431,0.0000658798,0.000011173192],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000085513646,0.00027188263,0.012531403,0.000030289684,0.00004606167,0.0000019968415,0.0007120778,0.0010132873,0.97758293,0.000018554249,0.0002084942,0.007497493],"study_design_scores_gemma":[0.00074004615,0.000235037,0.10371448,0.000059547016,0.00009219959,0.000013657956,0.0009635851,0.0011385994,0.89261717,0.000054395092,0.000267052,0.00010425984],"about_ca_topic_score_codex":0.000015696723,"about_ca_topic_score_gemma":0.000006513683,"teacher_disagreement_score":0.09118308,"about_ca_system_score_codex":0.000082122635,"about_ca_system_score_gemma":0.0000029890664,"threshold_uncertainty_score":0.5123864},"labels":[],"label_agreement":null},{"id":"W2896039244","doi":"10.12688/f1000research.16126.1","title":"Metagenomic evaluation of a Utah tar sand microbiota suggests the predominant hydrocarbonoclastic role of Actinobacteria","year":2018,"lang":"en","type":"preprint","venue":"F1000Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Savannah River National Laboratory; University of Alberta; U.S. Department of Energy","keywords":"Biology","score_opus":0.031496922946252795,"score_gpt":0.2988471485363754,"score_spread":0.2673502255901226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896039244","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945164,0.00023320186,0.0000059092426,0.00013887626,0.00026525426,0.0015444825,0.0002980708,0.000012405312,0.0029854358],"genre_scores_gemma":[0.9991399,0.00012731375,0.00023923913,0.000013927724,0.00008958118,0.00003138845,0.00008969237,0.000027696873,0.0002412308],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965107,0.00074056565,0.0005987355,0.000553007,0.0012005975,0.0003964045],"domain_scores_gemma":[0.9982078,0.00016546121,0.0004918299,0.0008720724,0.00015877861,0.00010404169],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0036426664,0.00025310146,0.00038759792,0.00010894191,0.00008957266,0.000048548336,0.0010809437,0.00026855295,0.011661671],"category_scores_gemma":[0.0003775006,0.00017645837,0.00015706396,0.00026443228,0.00081433525,0.000058729045,0.0018439869,0.00040116094,0.000504269],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013069587,0.00011039372,0.0047674715,0.00005515215,0.00006921408,4.452172e-7,0.0007131311,0.00021673941,0.9898041,0.0000019066094,0.0017977749,0.0023329684],"study_design_scores_gemma":[0.0006168346,0.00013588798,0.11393565,0.00010092042,0.00018809638,0.000004414893,0.000101036705,0.007507854,0.87439555,0.00041406907,0.0023496132,0.00025005618],"about_ca_topic_score_codex":0.0011357958,"about_ca_topic_score_gemma":0.00028928978,"teacher_disagreement_score":0.11540854,"about_ca_system_score_codex":0.00041247913,"about_ca_system_score_gemma":0.00031216003,"threshold_uncertainty_score":0.9892418},"labels":[],"label_agreement":null},{"id":"W2897083688","doi":"10.3390/colloids2040049","title":"Culture Medium Optimization for Production of Rhamnolipids by Burkholderia glumae","year":2018,"lang":"en","type":"article","venue":"Colloids and Interfaces","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada; Universitaire Stichting","keywords":"Rhamnolipid; Food science; Burkholderia; Mannitol; Response surface methodology; Fractional factorial design; Microbiology; Pseudomonas aeruginosa; Chemistry; Factorial experiment; Bacteria; Biology; Biochemistry; Chromatography; Mathematics","score_opus":0.007303232928326828,"score_gpt":0.2275094605665966,"score_spread":0.22020622763826977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897083688","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996266,0.00007301083,0.0010952605,0.00043581732,0.0006383251,0.00028291292,0.000031719872,0.000017455328,0.0011594613],"genre_scores_gemma":[0.9942142,0.0001162726,0.0022346422,0.00007692918,0.00009784078,0.0000047853027,0.00001659007,0.0000050647245,0.003233709],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99950594,0.000011077585,0.00013559662,0.0001755297,0.000078673,0.0000931921],"domain_scores_gemma":[0.99979067,0.00000506945,0.00007120564,0.00006918786,0.000029508334,0.00003435346],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010100481,0.00007107854,0.000083613755,0.000011825078,0.00007203289,0.000017711809,0.000071939794,0.00005743257,0.0009112742],"category_scores_gemma":[0.000046929646,0.00005428457,0.000014815108,0.00009183808,0.0002697645,0.00013054401,0.000041365693,0.000022659508,0.000013287793],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004002829,0.000024051309,0.00078769715,0.00000807792,0.0000051365646,7.1453994e-9,0.00057665457,0.000019694857,0.8807981,0.0000033952838,0.11685666,0.00088049326],"study_design_scores_gemma":[0.00023777176,0.00032878047,0.000556013,0.000013026052,0.000008967936,8.623949e-7,0.0002373726,0.0008645694,0.9307314,0.000018038867,0.06691472,0.00008848955],"about_ca_topic_score_codex":0.000021222224,"about_ca_topic_score_gemma":0.000033564353,"teacher_disagreement_score":0.049941942,"about_ca_system_score_codex":0.000022220485,"about_ca_system_score_gemma":0.000004650167,"threshold_uncertainty_score":0.9977814},"labels":[],"label_agreement":null},{"id":"W2898262301","doi":"10.1111/gwmr.12303","title":"Special Issue: Diagnostic Tools to Assess In Situ Remediation System Performance","year":2018,"lang":"en","type":"article","venue":"Groundwater Monitoring & Remediation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Waterloo","keywords":"Environmental remediation; Environmental science; Soil vapor extraction; Air sparging; Contamination; Zerovalent iron; Groundwater remediation; Waste management; Environmental chemistry; Biochemical engineering; Chemistry; Engineering","score_opus":0.026751136786050473,"score_gpt":0.2488946507261119,"score_spread":0.2221435139400614,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2898262301","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.986764,0.000003004349,0.00021790677,0.00021007916,0.0072729513,0.0005439634,0.000003846964,0.00010349753,0.004880757],"genre_scores_gemma":[0.98120946,0.000030429128,0.0008029716,0.00007824092,0.017359657,0.000036388865,0.000032308806,0.000022986875,0.00042754924],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997803,0.00009973125,0.0005004197,0.0004747245,0.0006464534,0.00047568398],"domain_scores_gemma":[0.9991962,0.00014518567,0.00015554798,0.0002809272,0.00005350262,0.0001686682],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006720887,0.00022061152,0.00019990036,0.00013900833,0.00016662611,0.00016647631,0.00027675647,0.00015066809,0.0004448172],"category_scores_gemma":[0.0003908839,0.00020995966,0.000037107828,0.0005738557,0.00006570542,0.00086231425,0.00013873549,0.00015000191,0.005768482],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060132526,0.00007781485,0.6585718,0.000034557113,0.0000055850132,0.0000073255464,0.0022616913,0.00010107256,0.2823006,0.0000051302445,0.0046159476,0.05195836],"study_design_scores_gemma":[0.00036370772,0.00015130015,0.7618464,0.000079566045,0.000008644132,0.0000025612844,0.0001672601,0.0000965969,0.21014138,0.0000027951999,0.026881259,0.00025848218],"about_ca_topic_score_codex":0.00014921927,"about_ca_topic_score_gemma":0.0003449344,"teacher_disagreement_score":0.10327466,"about_ca_system_score_codex":0.0011213921,"about_ca_system_score_gemma":0.000019886449,"threshold_uncertainty_score":0.99500567},"labels":[],"label_agreement":null},{"id":"W2898533553","doi":"10.1016/j.carres.2018.10.009","title":"Structural determination of ananatoside A: An unprecedented 15-membered macrodilactone-containing glycolipid from Pantoea ananatis","year":2018,"lang":"en","type":"article","venue":"Carbohydrate Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec en Outaouais; Institut National de la Recherche Scientifique","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Chemistry; Glycolipid; Bacteria; Stereochemistry; Pantoea agglomerans; Conformational isomerism; Biochemistry; Molecule; Organic chemistry; Biology","score_opus":0.05232173980659924,"score_gpt":0.34418442753541434,"score_spread":0.2918626877288151,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2898533553","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99721617,0.00001924586,0.000031087937,0.00011786959,0.00020249627,0.00031991358,0.00008756461,0.00003565242,0.0019700215],"genre_scores_gemma":[0.9989159,0.000023758053,0.00059957383,0.000061389794,0.00014763811,0.000005974299,0.00010043397,0.000020843045,0.00012447218],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973601,0.00040211316,0.00038295888,0.00051084615,0.0007939618,0.00055003155],"domain_scores_gemma":[0.9988961,0.00011452682,0.0001433741,0.00043425398,0.00016646319,0.0002452696],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007417707,0.00017054676,0.0002255079,0.0001672411,0.00024920786,0.00008050181,0.0004889065,0.00014989394,0.0051068943],"category_scores_gemma":[0.00018827939,0.00015284518,0.00005209827,0.0008901552,0.0006646715,0.0004046573,0.00025334634,0.00023261168,0.00027608083],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011230581,0.000026334483,0.035667904,0.000004835404,0.000009706445,0.0000074523546,0.00093720836,0.0000039789406,0.9521742,0.000015944022,0.0002917369,0.010748386],"study_design_scores_gemma":[0.0007765657,0.00042010957,0.14467613,0.000032147447,0.00001277361,0.000002212066,0.0005548236,0.019015852,0.833331,0.00041940185,0.00047641108,0.00028260262],"about_ca_topic_score_codex":0.006836235,"about_ca_topic_score_gemma":0.010209717,"teacher_disagreement_score":0.11884325,"about_ca_system_score_codex":0.00028124955,"about_ca_system_score_gemma":0.00005512421,"threshold_uncertainty_score":0.9997773},"labels":[],"label_agreement":null},{"id":"W2901118055","doi":"10.1016/j.envpol.2018.11.012","title":"Petroleum hydrocarbon (PHC) uptake in plants: A literature review","year":2018,"lang":"en","type":"review","venue":"Environmental Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":82,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stantec (Canada)","funders":"","keywords":"Trophic level; Human health; Edible plants; Risk assessment; Ecology; Biology; Environmental health; Biotechnology; Medicine","score_opus":0.012229755391562408,"score_gpt":0.24173330412791058,"score_spread":0.22950354873634818,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901118055","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00024342691,0.9956466,0.0000015895512,0.000059525028,0.0003387898,0.0009513712,0.0004878081,0.00003893119,0.0022319504],"genre_scores_gemma":[0.00045610577,0.9964521,0.00005650663,0.00090863154,0.00017314492,0.00003834172,0.00089053327,0.000049506874,0.00097512227],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9970659,0.00025378758,0.0008773834,0.00081911724,0.0004821957,0.0005016363],"domain_scores_gemma":[0.9988865,0.000015718018,0.00044528604,0.00048877293,6.2807567e-7,0.00016306662],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00043870145,0.0005954893,0.0010008224,0.00012249932,0.00008189779,0.000036229507,0.00042583424,0.00047333096,0.003682409],"category_scores_gemma":[0.000020484142,0.00048679815,0.00036444253,0.00034823146,0.00022427212,0.0002229306,0.00028063,0.0005048381,0.00787437],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002279861,0.00047214807,0.00017277825,0.008564117,0.0000646075,0.00012909042,0.00014326922,0.0000024288024,0.00060455245,0.0000035118026,0.05128768,0.938533],"study_design_scores_gemma":[0.00019874549,0.000058863046,0.0004156334,0.02544169,0.0001026274,0.000090463145,0.000004724268,0.0000073196206,0.000012483247,0.000006132098,0.9731783,0.00048298822],"about_ca_topic_score_codex":0.000017852313,"about_ca_topic_score_gemma":0.000044268625,"teacher_disagreement_score":0.93805003,"about_ca_system_score_codex":0.0012328188,"about_ca_system_score_gemma":0.000019003885,"threshold_uncertainty_score":0.99975836},"labels":[],"label_agreement":null},{"id":"W2901601197","doi":"10.3390/environments5110124","title":"Bioremediation of Polluted Soil Sites with Crude Oil Hydrocarbons Using Carrot Peel Waste","year":2018,"lang":"en","type":"article","venue":"Environments","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre in Green Chemistry and Catalysis","funders":"","keywords":"Bioremediation; Chemistry; Hydrocarbon; Petroleum; Total petroleum hydrocarbon; Soil contamination; Environmental chemistry; Biostimulation; Crude oil; Environmental science; Pulp and paper industry; Soil water; Bacteria; Geology","score_opus":0.011853323792939232,"score_gpt":0.20949500531613485,"score_spread":0.1976416815231956,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901601197","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974968,0.000012302047,0.00017209261,0.000059762726,0.000097055665,0.00009525232,0.000031690888,0.000017271921,0.00201776],"genre_scores_gemma":[0.9975152,0.000020590798,0.0013501581,0.00015409649,0.00008615374,0.000001996269,0.000025686415,0.000019914529,0.00082622515],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986448,0.0000466274,0.00025396945,0.0003189409,0.00045510687,0.00028053],"domain_scores_gemma":[0.9993966,0.000012339519,0.00020452027,0.00026816397,0.0000026136927,0.00011576268],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012763597,0.00017620689,0.0001568469,0.000046500845,0.00010763847,0.000011963467,0.00017989414,0.000086599044,0.0013552785],"category_scores_gemma":[0.000015002741,0.00014591315,0.000040292856,0.00018348568,0.00046686124,0.000163557,0.000118479125,0.00007046797,0.000451523],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003084595,0.00008089104,0.08275985,0.0000027992007,0.000014549263,0.000001474497,0.0002535701,0.00013293055,0.9155937,9.408977e-7,0.00018899552,0.0009394976],"study_design_scores_gemma":[0.00080705626,0.00018711545,0.10396854,0.000020804831,0.00004259348,0.0000042388588,0.00010023523,0.0020357515,0.89077747,0.000012387727,0.0017584935,0.0002853282],"about_ca_topic_score_codex":0.00015111518,"about_ca_topic_score_gemma":0.00023054986,"teacher_disagreement_score":0.0248162,"about_ca_system_score_codex":0.0001631483,"about_ca_system_score_gemma":0.00001099069,"threshold_uncertainty_score":0.9995576},"labels":[],"label_agreement":null},{"id":"W2901892507","doi":"10.1016/j.watres.2018.11.023","title":"Oil-in-water emulsion breaking marine bacteria for demulsifying oily wastewater","year":2018,"lang":"en","type":"article","venue":"Water Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":112,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada; Research and Development Corporation of Newfoundland and Labrador; Canada Foundation for Innovation","keywords":"Emulsion; Bacteria; Wastewater; Chemistry; Chromatography; Biology; Environmental science; Environmental engineering; Organic chemistry","score_opus":0.053206672004522594,"score_gpt":0.32537762767214207,"score_spread":0.27217095566761945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901892507","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99269855,0.0000012561395,0.000007472791,0.0011252785,0.00020542325,0.0001898743,0.0000057510374,0.000025796635,0.005740577],"genre_scores_gemma":[0.9891811,0.000007735344,0.0008692626,0.00014459479,0.00019947252,0.000026990205,0.000060643008,0.000024797228,0.009485385],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977045,0.00014362804,0.00027384833,0.00045164014,0.00042765922,0.0009987012],"domain_scores_gemma":[0.99952585,0.000018520426,0.000016704918,0.0002708809,0.000043660148,0.00012436887],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0013488154,0.0001407823,0.00014117996,0.00012983839,0.00026724077,0.00012151672,0.0003391419,0.000110970446,0.013911396],"category_scores_gemma":[0.000029086834,0.000079952326,0.000045872977,0.00014306468,0.0002487351,0.00023079748,0.00084584375,0.00018168402,0.00616044],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014581479,0.000044664586,0.012424191,0.000020250767,0.000003217395,0.0000058891355,0.0010895681,0.0000015373391,0.9754572,0.0000021392352,0.0011304119,0.009675145],"study_design_scores_gemma":[0.0005868685,0.00011278098,0.006858102,0.00001908914,0.0000016125597,0.0000041820376,0.000038744147,0.00024066598,0.9054243,0.00011305452,0.08644967,0.00015095332],"about_ca_topic_score_codex":0.0005951897,"about_ca_topic_score_gemma":0.0008380148,"teacher_disagreement_score":0.08531926,"about_ca_system_score_codex":0.00018695297,"about_ca_system_score_gemma":0.000004069867,"threshold_uncertainty_score":0.99461335},"labels":[],"label_agreement":null},{"id":"W2903902634","doi":"10.3390/su10124817","title":"The Role of Biosurfactants in the Continued Drive for Environmental Sustainability","year":2018,"lang":"en","type":"article","venue":"Sustainability","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":109,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Northern British Columbia","funders":"University of Northern British Columbia","keywords":"Sustainability; Reuse; Pollutant; Bioremediation; Biochemical engineering; Environmental science; Waste management; Business; Engineering; Contamination; Ecology","score_opus":0.0030850563810508654,"score_gpt":0.22709212467292186,"score_spread":0.224007068291871,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2903902634","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99478614,0.00003338719,0.000025744283,0.0021677176,0.00007307088,0.0018059452,0.00005344197,0.000012283295,0.0010422943],"genre_scores_gemma":[0.99951124,0.00000720132,0.000053489184,0.00010819018,0.000032913456,0.00003992489,0.000006962029,0.000007454785,0.00023261186],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99815947,0.00029184704,0.0004120705,0.0003648836,0.00029736417,0.00047438694],"domain_scores_gemma":[0.99870026,0.00040394563,0.00016089983,0.00057886547,0.00010139087,0.000054658187],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020929172,0.00015514274,0.00016627293,0.000018037947,0.0003148796,0.000031830383,0.0005539455,0.00008991343,0.00026414372],"category_scores_gemma":[0.001469893,0.000089741865,0.000104524086,0.0002531483,0.0018121225,0.00011995439,0.00018069702,0.00011657667,0.000018783669],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035951892,0.0003942766,0.92854816,0.000024241319,0.00000914654,0.0000010716552,0.0037795578,0.0000060781877,0.019993044,0.0007583738,0.000649053,0.045477472],"study_design_scores_gemma":[0.0005870715,0.00027380398,0.86700845,0.0000020233888,0.000010571461,0.0000011556203,0.014829347,0.00021179298,0.024947751,0.032052226,0.05990418,0.00017164883],"about_ca_topic_score_codex":0.00029943304,"about_ca_topic_score_gemma":0.0008943223,"teacher_disagreement_score":0.061539736,"about_ca_system_score_codex":0.0011268323,"about_ca_system_score_gemma":0.00010608538,"threshold_uncertainty_score":0.6676841},"labels":[],"label_agreement":null},{"id":"W2910453271","doi":"10.1080/15226514.2018.1523873","title":"Toluene biodegradation in the vadose zone of a poplar phytoremediation system identified using metagenomics and toluene-specific stable carbon isotope analysis","year":2019,"lang":"en","type":"article","venue":"International Journal of Phytoremediation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo; EcoMetrix; University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Vadose zone; Biodegradation; Rhizosphere; Environmental chemistry; Stable-isotope probing; Toluene; Chemistry; Environmental science; Soil water; Soil science; Geology; Organic chemistry; Microorganism","score_opus":0.012754187037304465,"score_gpt":0.22806075334236559,"score_spread":0.21530656630506112,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2910453271","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968789,0.00016415208,0.0013600038,0.00014920703,0.001029313,0.00025677087,0.00003059742,0.0000056520585,0.00012539966],"genre_scores_gemma":[0.9985478,0.00017063928,0.0009588977,0.000055235458,0.0001921923,0.0000013744983,0.000048314712,0.000009220794,0.00001632216],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9976072,0.00017361026,0.0008666645,0.0002118792,0.0009879993,0.00015266547],"domain_scores_gemma":[0.99833274,0.00009530726,0.0011624378,0.00017079663,0.0001871107,0.00005161495],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013286544,0.00014522459,0.0003100848,0.00042395332,0.000030988587,0.00007203716,0.00037359082,0.00008774538,0.0001197931],"category_scores_gemma":[0.000060515555,0.00011529746,0.00012459619,0.0006886148,0.000052171614,0.0005015503,0.000058892478,0.00014269944,0.0000109047],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000154619,0.00011580929,0.36629388,0.000018104987,0.00019929439,0.0000074608565,0.0012294102,0.005657672,0.6248887,0.00008908734,0.00006390146,0.0012820325],"study_design_scores_gemma":[0.0029146,0.0001755499,0.80026835,0.00010821867,0.00043921336,0.00004684027,0.001974516,0.057619736,0.13464755,0.00009333824,0.0013063981,0.00040569485],"about_ca_topic_score_codex":0.0003611861,"about_ca_topic_score_gemma":0.0002968586,"teacher_disagreement_score":0.4902412,"about_ca_system_score_codex":0.00048838276,"about_ca_system_score_gemma":0.00003810716,"threshold_uncertainty_score":0.4701694},"labels":[],"label_agreement":null},{"id":"W2911844125","doi":"10.1080/15226514.2018.1523870","title":"Kinetics of phytoremediation of petroleum hydrocarbon contaminated soil","year":2019,"lang":"en","type":"article","venue":"International Journal of Phytoremediation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Waterloo; Earthmaster Environmental Strategies (Canada)","funders":"National Research Council Canada; Natural Sciences and Engineering Research Council of Canada","keywords":"Environmental remediation; Phytoremediation; Rhizosphere; Environmental science; Soil contamination; Total petroleum hydrocarbon; Biomass (ecology); Contamination; Environmental chemistry; Environmental engineering; Soil science; Chemistry; Soil water; Agronomy; Ecology; Geology; Biology","score_opus":0.0038722554899875074,"score_gpt":0.2069916223750676,"score_spread":0.2031193668850801,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2911844125","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953912,0.00003585046,0.0003954686,0.0002407416,0.0022854805,0.00011987758,0.000028290035,0.000006771007,0.0014963268],"genre_scores_gemma":[0.99904794,0.00009235567,0.00035018797,0.0000781412,0.00028943256,6.3484066e-7,0.000036684884,0.000011928688,0.00009269168],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975996,0.0000641003,0.00090076873,0.00013972953,0.0011618654,0.0001339191],"domain_scores_gemma":[0.9976786,0.00008671805,0.001696027,0.00012754905,0.00034002698,0.00007110245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003671245,0.00013165575,0.0002725518,0.00018973243,0.000008368388,0.0000117286545,0.0004042739,0.000100626596,0.0009072058],"category_scores_gemma":[0.00020036199,0.000117836425,0.00014225887,0.00018731307,0.000086825894,0.00032990897,0.00006430235,0.00013190473,0.00006951502],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014871478,0.00018586927,0.14414753,0.000011637585,0.000053108528,0.000002004532,0.00027546397,0.0014543793,0.8509729,0.000029832925,0.0005308513,0.0021877477],"study_design_scores_gemma":[0.0014941678,0.00036004733,0.2214402,0.000056531542,0.000027271517,0.000008126621,0.000073832736,0.0016391776,0.7734064,0.00014490027,0.0012313792,0.000117971606],"about_ca_topic_score_codex":0.00003857447,"about_ca_topic_score_gemma":0.000037729485,"teacher_disagreement_score":0.07756646,"about_ca_system_score_codex":0.00023248754,"about_ca_system_score_gemma":0.00003083823,"threshold_uncertainty_score":0.9933268},"labels":[],"label_agreement":null},{"id":"W2912329112","doi":"10.1016/j.biortech.2019.02.002","title":"First demonstration that ascomycetous halophilic fungi (Aspergillus sydowii and Aspergillus destruens) are useful in xenobiotic mycoremediation under high salinity conditions","year":2019,"lang":"en","type":"article","venue":"Bioresource Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":87,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada; Consejo Nacional de Ciencia y Tecnología; Department of Science and Technology, Ministry of Science and Technology, India; Université de Sherbrooke","keywords":"Halophile; Phenanthrene; Salinity; Xenobiotic; Biodegradation; Bioremediation; Wastewater; Biology; Environmental chemistry; Botany; Ecotoxicity; Chemistry; Environmental engineering; Biochemistry; Organic chemistry; Enzyme; Contamination; Toxicity; Ecology; Environmental science","score_opus":0.008920583277622865,"score_gpt":0.19687150001438455,"score_spread":0.18795091673676168,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912329112","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99554944,0.00011506412,0.000043687483,0.002895255,0.00020106972,0.0006055532,0.00005682239,0.00022681043,0.000306274],"genre_scores_gemma":[0.9989276,0.00014616307,0.00025420016,0.00042234844,0.000024947542,0.000012512482,0.00008009051,0.000025344743,0.00010680285],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982053,0.00006883882,0.00038066544,0.00062019046,0.0002702233,0.00045475803],"domain_scores_gemma":[0.99910223,0.00008820175,0.00024671806,0.00042979454,0.00001839303,0.00011465794],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00020769454,0.00028217578,0.0003154906,0.00030732222,0.00017797152,0.000042358348,0.00029220714,0.0005564068,0.0012665973],"category_scores_gemma":[0.00007535752,0.0002697882,0.000050368806,0.0006967819,0.00050789554,0.00018462447,0.00020495483,0.00032166098,0.00095048465],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023736293,0.00010834912,0.91155833,0.000016352833,0.000012869025,0.000014060104,0.000102570135,0.0005640759,0.08649721,0.000453453,0.0003066617,0.00034230918],"study_design_scores_gemma":[0.0010304281,0.0001266731,0.9831845,0.00004302297,0.00002119737,0.000052937292,0.00048826804,0.00045766923,0.011713411,0.0009911224,0.0015303589,0.00036042056],"about_ca_topic_score_codex":0.0002881208,"about_ca_topic_score_gemma":0.0024173069,"teacher_disagreement_score":0.0747838,"about_ca_system_score_codex":0.00033412682,"about_ca_system_score_gemma":0.0000220614,"threshold_uncertainty_score":0.99997544},"labels":[],"label_agreement":null},{"id":"W2913727043","doi":"10.1021/acs.est.8b03717","title":"Reductive Dehalogenation of Trichloromethane by Two Different <i>Dehalobacter restrictus</i> Strains Reveal Opposing Dual Element Isotope Effects","year":2019,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Deutsche Forschungsgemeinschaft; Helmholtz-Gemeinschaft","keywords":"Kinetic isotope effect; Chemistry; Isotope analysis; Stereochemistry; Stable isotope ratio; Isotopes of carbon; Isotope; Biochemistry; Organic chemistry; Biology; Deuterium; Total organic carbon","score_opus":0.0037863824959854806,"score_gpt":0.2074819729161279,"score_spread":0.20369559042014243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2913727043","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972478,0.00005171317,0.0000798949,0.00037004275,0.00028220643,0.0008282668,0.00006812992,0.000055283675,0.0010166495],"genre_scores_gemma":[0.9987816,0.000060068425,0.00059524097,0.00012994104,0.000015127041,0.0000149265,0.000035768615,0.000014465852,0.00035285877],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973783,0.00006565615,0.00042285232,0.0007725282,0.0007517643,0.00060891494],"domain_scores_gemma":[0.99908787,0.00003407943,0.00029927024,0.00042288098,0.0000059108766,0.00015001082],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00040900562,0.0002656858,0.00029234609,0.0002757626,0.00015956823,0.000024501232,0.0005899646,0.00015376265,0.0012859092],"category_scores_gemma":[0.000048419657,0.00022667708,0.00006462433,0.0010819496,0.001470378,0.00035124627,0.0005545848,0.00023035803,0.00039478316],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017586812,0.0002479166,0.07615343,0.0000042813813,0.000007080622,0.000002741091,0.000107610605,0.0000261282,0.91328377,0.000033503817,0.00022259078,0.00989334],"study_design_scores_gemma":[0.00071364135,0.0004420727,0.1052074,0.000012652916,0.000015532327,0.000015485224,0.00017451473,0.000049533155,0.8920639,0.00011093307,0.0009457181,0.00024858743],"about_ca_topic_score_codex":0.00003916213,"about_ca_topic_score_gemma":0.000008073997,"teacher_disagreement_score":0.02905397,"about_ca_system_score_codex":0.00088723964,"about_ca_system_score_gemma":0.000020271895,"threshold_uncertainty_score":0.99962705},"labels":[],"label_agreement":null},{"id":"W2913973794","doi":"10.1038/s41598-018-37323-x","title":"Proteinaceous Nano container Encapsulate Polycyclic Aromatic Hydrocarbons","year":2019,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stantec (Canada); Canadian Mennonite University; International Institute for Sustainable Development; University of Manitoba","funders":"Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada; Canadian Light Source","keywords":"Acenaphthylene; Pyrene; Naphthalene; Chemistry; Fluorene; Environmental chemistry; Chromatography; Organic chemistry; Polymer","score_opus":0.005113080491584485,"score_gpt":0.19452725868013532,"score_spread":0.18941417818855083,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2913973794","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97385985,0.00002097223,0.000008806055,0.00020336582,0.0035358195,0.0006989985,7.7204106e-7,0.000083703744,0.021587731],"genre_scores_gemma":[0.96512896,0.0000011268595,0.00022186646,0.00012681645,0.000020055835,0.000008199767,0.000019867022,0.0000130301205,0.034460105],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978226,0.00004354774,0.00043130195,0.00072472054,0.00058161333,0.0003962518],"domain_scores_gemma":[0.9987691,0.0000120077375,0.00026990476,0.00078379066,0.0000024001952,0.0001628196],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000774415,0.00016224103,0.00017293726,0.0000624274,0.00016744592,0.0001610537,0.00018707896,0.00007877943,0.0024564106],"category_scores_gemma":[0.00006550097,0.00012952679,0.00008458395,0.00046485907,0.00023602317,0.00020722902,0.00012567775,0.00008707109,0.005739615],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000003773472,0.000048870395,0.033277784,0.000002782201,0.0000046170767,0.000069554364,0.00016682615,0.0000075300118,0.95908666,0.0000022788297,0.0065762973,0.00075301423],"study_design_scores_gemma":[0.0005626585,0.00012347494,0.035490956,0.000062914514,0.000028244036,0.0005424717,0.000120598546,0.00071922276,0.70348173,0.006134935,0.25187808,0.0008546789],"about_ca_topic_score_codex":0.000121722296,"about_ca_topic_score_gemma":0.00006847285,"teacher_disagreement_score":0.25560492,"about_ca_system_score_codex":0.000115144874,"about_ca_system_score_gemma":0.000036951347,"threshold_uncertainty_score":0.99845546},"labels":[],"label_agreement":null},{"id":"W2914206490","doi":"10.1016/j.jes.2019.02.001","title":"Vertical response of microbial community and degrading genes to petroleum hydrocarbon contamination in saline alkaline soil","year":2019,"lang":"en","type":"article","venue":"Journal of Environmental Sciences","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":67,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Science Foundation of Tianjin City; National Natural Science Foundation of China","keywords":"Biostimulation; Bioremediation; Microbial population biology; Environmental chemistry; Petroleum; Microcosm; Soil water; Bioaugmentation; Soil contamination; Microorganism; Environmental science; Chemistry; Contamination; Bacteria; Biology; Ecology; Soil science","score_opus":0.01028972310493133,"score_gpt":0.22672453148880883,"score_spread":0.2164348083838775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2914206490","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993395,0.00003359382,0.000008784911,0.0003021027,0.000088941895,0.000088480054,0.0000057096754,0.0000016660476,0.0001312219],"genre_scores_gemma":[0.9993728,0.000051501218,0.00034280887,0.00016745347,0.000013140685,2.2797035e-7,8.1100393e-7,0.0000035030314,0.000047789446],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987192,0.0002558817,0.00039212196,0.00012076326,0.00035129592,0.00016073619],"domain_scores_gemma":[0.9995345,0.00013375154,0.00015188714,0.00007754072,0.0000025082866,0.000099809324],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018841928,0.000090915506,0.00018258343,0.00010316306,0.000067430876,0.000017479762,0.0002391441,0.000045379886,0.00040793445],"category_scores_gemma":[0.00006526613,0.0000720085,0.00003825143,0.00016866827,0.00033372123,0.00023173216,0.00015355831,0.00013990534,0.000035593268],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002191699,0.000104522216,0.26055023,0.0000019490274,0.0000019837312,0.0000016856532,0.00028524455,0.00030267486,0.7375252,0.0000012086366,0.000024904788,0.0009812176],"study_design_scores_gemma":[0.0007655802,0.00086673535,0.7729098,0.000029245746,0.0000061965006,0.000027813803,0.0005152826,0.00044791395,0.2240474,0.000013249301,0.0002791444,0.00009161733],"about_ca_topic_score_codex":0.00011622407,"about_ca_topic_score_gemma":0.00016513694,"teacher_disagreement_score":0.5134778,"about_ca_system_score_codex":0.00016672556,"about_ca_system_score_gemma":0.000012799648,"threshold_uncertainty_score":0.44665962},"labels":[],"label_agreement":null},{"id":"W2914541138","doi":"10.1002/jctb.5945","title":"Microbial degradation of four dispersed crude oils by <i>Rhodococcus</i> sp. evaluated using carbon stable isotope analysis","year":2019,"lang":"en","type":"article","venue":"Journal of Chemical Technology & Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"China Scholarship Council; Natural Sciences and Engineering Research Council of Canada; National Natural Science Foundation of China","keywords":"Biodegradation; Isotopes of carbon; Environmental chemistry; Fractionation; Chemistry; Isotope-ratio mass spectrometry; Residual oil; Microbial biodegradation; Isotope analysis; Isotope fractionation; Carbon fibers; Gas chromatography; Stable isotope ratio; Chromatography; Total organic carbon; Organic chemistry; Microorganism; Ecology; Geology; Materials science; Bacteria","score_opus":0.009645895450078507,"score_gpt":0.23008732675056845,"score_spread":0.22044143130048993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2914541138","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969106,0.0001244035,0.00042301006,0.0019456925,0.00015377936,0.00023285137,0.000030331641,0.000068564485,0.00011078234],"genre_scores_gemma":[0.99500936,0.000093504954,0.004676979,0.00011032704,0.000015094524,9.674775e-7,0.000012752522,0.000017578634,0.00006343377],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99780035,0.00006129195,0.00095146766,0.00038925762,0.00036311639,0.00043449725],"domain_scores_gemma":[0.9982731,0.000041377298,0.0010697872,0.00043914284,0.0000943841,0.000082237704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004715437,0.0002525286,0.00076998095,0.0006135947,0.00003260107,0.000012335597,0.0007753816,0.0011516864,0.00079129613],"category_scores_gemma":[0.00020759592,0.00021693074,0.00023853692,0.0024740524,0.000619034,0.00013415054,0.0002920347,0.00066775875,0.000035270943],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008544631,0.00014319562,0.033075117,0.000008269096,0.00020268062,0.000006241706,0.000011292049,0.000040459032,0.9641975,0.000014947974,0.00049439695,0.00172045],"study_design_scores_gemma":[0.0009911923,0.0001750884,0.00027340624,0.000021347274,0.00032710625,0.00007145331,0.000055191325,0.00087515445,0.9953619,0.00012614993,0.0015079881,0.00021401102],"about_ca_topic_score_codex":0.00008558147,"about_ca_topic_score_gemma":0.000016149585,"teacher_disagreement_score":0.03280171,"about_ca_system_score_codex":0.0003415029,"about_ca_system_score_gemma":0.00005307417,"threshold_uncertainty_score":0.88828605},"labels":[],"label_agreement":null},{"id":"W2916120159","doi":"10.1016/bs.ache.2018.12.002","title":"Solid–liquid partitioning bioreactors for industrial wastewater treatment","year":2019,"lang":"en","type":"book-chapter","venue":"Advances in chemical engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Polymer; Aqueous solution; Inert; Solvent; Bioreactor; Flammable liquid; Organic solvent; Sewage treatment; Chemical engineering; Chemistry; Industrial wastewater treatment; Aqueous two-phase system; Materials science; Degradation (telecommunications); Organic chemistry; Waste management","score_opus":0.015884197280571447,"score_gpt":0.23915225692489472,"score_spread":0.22326805964432328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2916120159","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7282711,0.0036285992,0.0005593035,0.00079878233,0.009692853,0.007652478,0.0016230762,0.0008496586,0.24692412],"genre_scores_gemma":[0.94170606,0.0020131327,0.004164852,0.00017007648,0.001456819,0.00010838606,0.00095163024,0.0002717471,0.049157266],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99893343,0.0000019543238,0.0002995989,0.00035061914,0.00013616288,0.00027821795],"domain_scores_gemma":[0.99961394,0.000067330344,0.00008727503,0.00015230768,0.0000038946887,0.00007523276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005206276,0.00027335677,0.00028491305,0.000041678264,0.000014445546,0.000013226041,0.00012498868,0.00029595356,0.0007889942],"category_scores_gemma":[0.000028081016,0.00023914549,0.00010243834,0.000028862552,0.000043172793,0.00014789088,0.000061147584,0.00016695306,0.00018542292],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022193421,0.00006896678,0.00032715232,0.00007811755,0.000047835863,0.000007941479,0.00012316732,0.022991212,0.963209,0.001408924,0.0004981347,0.011017659],"study_design_scores_gemma":[0.0008706058,0.00015028697,0.000004448238,0.00019055743,0.000021696698,0.0000022860509,0.0000023281889,0.000863053,0.40617445,0.00007409375,0.5911522,0.00049397256],"about_ca_topic_score_codex":0.0000049787245,"about_ca_topic_score_gemma":0.000006943935,"teacher_disagreement_score":0.5906541,"about_ca_system_score_codex":0.00047673003,"about_ca_system_score_gemma":0.000012645759,"threshold_uncertainty_score":0.97520703},"labels":[],"label_agreement":null},{"id":"W2921898382","doi":"10.1021/acs.est.8b06643","title":"Mechanistic Dichotomy in Bacterial Trichloroethene Dechlorination Revealed by Carbon and Chlorine Isotope Effects","year":2019,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Deutsche Forschungsgemeinschaft","keywords":"Chlorine; Environmental chemistry; Isotopes of carbon; Carbon fibers; Environmental science; Chemistry; Reductive dechlorination; Biodegradation; Total organic carbon; Organic chemistry; Materials science","score_opus":0.0020579592642950336,"score_gpt":0.1800759652162243,"score_spread":0.17801800595192926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2921898382","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99764,0.000039383434,0.00001380427,0.00029131476,0.00028992363,0.00068638107,0.000008611868,0.00005840511,0.0009721696],"genre_scores_gemma":[0.9991237,0.00011735626,0.0002192286,0.00010882483,0.0000121541725,0.000025253377,0.000009304965,0.000011455422,0.00037273593],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99820954,0.000030054982,0.00024757106,0.0006727799,0.00037432017,0.00046572043],"domain_scores_gemma":[0.9994469,0.000029810852,0.00010961414,0.0002795916,0.0000017525193,0.00013227944],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00042602528,0.00019460428,0.00020814262,0.0002528689,0.000096437405,0.000027951686,0.00040658482,0.00016186589,0.0011899106],"category_scores_gemma":[0.000074974574,0.00017894305,0.000018593879,0.0009508166,0.00077403075,0.0002561436,0.0004618793,0.00018185009,0.00032219745],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020030371,0.000071696326,0.1540512,0.0000034409172,0.0000011080567,0.0000039902857,0.000041217467,0.0000025216757,0.8412675,0.00003987625,0.000016089249,0.0044812746],"study_design_scores_gemma":[0.0014873323,0.00036432315,0.22341014,0.000015538048,0.000007623237,0.000018943403,0.000075128344,0.00043909854,0.7692494,0.0004543613,0.004123039,0.00035508978],"about_ca_topic_score_codex":0.00009681756,"about_ca_topic_score_gemma":0.000039237173,"teacher_disagreement_score":0.07201818,"about_ca_system_score_codex":0.00057102786,"about_ca_system_score_gemma":0.000012742948,"threshold_uncertainty_score":0.99972314},"labels":[],"label_agreement":null},{"id":"W2925119924","doi":"10.1038/s41598-018-36567-x","title":"Anaerobic degradation of hexadecane and phenanthrene coupled to sulfate reduction by enriched consortia from northern Gulf of Mexico seafloor sediment","year":2019,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"College of Computing; Georgia Institute of Technology","keywords":"Phenanthrene; Hexadecane; Environmental chemistry; Sulfate-reducing bacteria; Sulfate; Enrichment culture; Chemistry; Biology; Bacteria; Organic chemistry; Paleontology","score_opus":0.006508485883014007,"score_gpt":0.20540335782713892,"score_spread":0.19889487194412492,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2925119924","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977773,0.00005737377,0.00006498384,0.0001339576,0.0012558744,0.00045511246,0.000031524574,0.000014764388,0.00020912134],"genre_scores_gemma":[0.9962594,0.000009019086,0.0005436713,0.000015280837,0.000008269401,0.0000027441204,0.00020734116,0.000007878418,0.0029463952],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981397,0.000037538724,0.00055937166,0.0005872238,0.0004961978,0.00017998929],"domain_scores_gemma":[0.9988751,0.000014682057,0.000488813,0.00043070322,0.000065501066,0.00012523579],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00070199906,0.000120441335,0.00021260498,0.000057634483,0.0000616014,0.000032657583,0.00009575755,0.00006060035,0.004220385],"category_scores_gemma":[0.000047934936,0.000102765785,0.000034824938,0.0004684383,0.00023827018,0.00014233634,0.00009085212,0.000042663338,0.00019959037],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023056442,0.0000734884,0.05993708,0.000006474597,0.000010725692,0.000001750813,0.00019320897,0.000110940775,0.93346447,6.7177336e-7,0.0050870744,0.0010910368],"study_design_scores_gemma":[0.00028896556,0.000061647646,0.021675702,0.000019212475,0.000020561716,0.000008354805,0.00012256358,0.00020408318,0.9736476,0.000051204617,0.00375081,0.00014927439],"about_ca_topic_score_codex":0.001587455,"about_ca_topic_score_gemma":0.00036205465,"teacher_disagreement_score":0.040183127,"about_ca_system_score_codex":0.00008100175,"about_ca_system_score_gemma":0.000042349206,"threshold_uncertainty_score":0.9966899},"labels":[],"label_agreement":null},{"id":"W2932573612","doi":"10.1111/1462-2920.14609","title":"Metagenomic and metatranscriptomic responses of natural oil degrading bacteria in the presence of dispersants","year":2019,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Fisheries and Oceans Canada; Bedford Institute of Oceanography; National Research Council Canada","funders":"Division of Ocean Sciences; Natural Resources Canada; Fisheries and Oceans Canada; Compute Canada; Suncor Energy Incorporated; Environmental Studies Research Funds; Dalhousie University; Dartmouth College","keywords":"Dispersant; Biology; Bacteria; Metagenomics; Abundance (ecology); Microcosm; Ecology; Gene; Dispersion (optics); Biochemistry","score_opus":0.0058321378555261675,"score_gpt":0.192604812666786,"score_spread":0.18677267481125984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2932573612","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990995,0.0002986504,7.551319e-7,0.00007254715,0.00013709207,0.00014096113,0.00009519973,0.000002636763,0.00015266397],"genre_scores_gemma":[0.9991043,0.00020991429,0.0002492164,0.000109417735,0.0000040773375,0.0000016567342,0.000021125927,0.00000607722,0.0002941733],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990184,0.00022104417,0.00027487718,0.000244901,0.000056350025,0.00018443391],"domain_scores_gemma":[0.9995633,0.00011363518,0.00012380898,0.0001778657,6.051277e-7,0.000020810987],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003095761,0.00012297947,0.00021796928,0.00003834846,0.000021230817,0.0000042968263,0.00025190652,0.000062441475,0.0015293377],"category_scores_gemma":[0.000011838302,0.00008442403,0.00005103411,0.00007102768,0.00044838432,0.00008508329,0.00010659875,0.00010113077,0.00011102783],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009175722,0.000043803964,0.13131021,0.000007910376,0.000010222124,8.856449e-7,0.00071155315,0.0000031759648,0.8671463,0.000004509509,0.000025973122,0.0006436768],"study_design_scores_gemma":[0.00050139445,0.00007058483,0.4376211,0.000009602524,0.0000146436705,0.000025725387,0.00038362123,0.000018327,0.55992454,0.0000047865287,0.0013145943,0.000111067464],"about_ca_topic_score_codex":0.00007067519,"about_ca_topic_score_gemma":0.00005058747,"teacher_disagreement_score":0.30722174,"about_ca_system_score_codex":0.00004846196,"about_ca_system_score_gemma":0.000003840883,"threshold_uncertainty_score":0.9993834},"labels":[],"label_agreement":null},{"id":"W2932834123","doi":"10.1016/j.scitotenv.2019.03.447","title":"An ecological microsystem to treat waste oil contaminated soil: Using phytoremediation assisted by fungi and local compost, on a mixed-contaminant site, in a cold climate","year":2019,"lang":"en","type":"article","venue":"The Science of The Total Environment","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Yukon University; University of Saskatchewan; Université de Montréal; Center for Northern Studies","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Phytoremediation; Compost; Environmental science; Microsystem; Waste management; Contamination; Soil contamination; Environmental engineering; Ecology; Soil water; Soil science; Engineering; Biology; Materials science","score_opus":0.006739443207931638,"score_gpt":0.2020307385976681,"score_spread":0.19529129538973647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2932834123","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988781,0.000014032726,0.0000071296304,0.00025091707,0.00015346998,0.0004549311,0.000065071305,0.000008523699,0.00016782357],"genre_scores_gemma":[0.9995441,0.000023930961,0.00006409313,0.00013031453,0.000008116545,0.000005745019,0.000004181134,0.000008078854,0.00021147546],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980828,0.0001598866,0.00032390686,0.00046193667,0.00057519716,0.0003962646],"domain_scores_gemma":[0.99920446,0.00006413682,0.00019546943,0.00039895307,0.000006614798,0.00013038093],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010109402,0.00018099588,0.0002139921,0.000042471394,0.00019602204,0.000041624,0.00043713275,0.000073409414,0.00013127572],"category_scores_gemma":[0.000017591254,0.000103991,0.000042126016,0.00030960698,0.00071701664,0.00017157692,0.00038807382,0.00012427181,0.00015605628],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006242952,0.00023662117,0.0033285816,0.00000847474,0.000001663625,9.360342e-7,0.00034198503,0.017747905,0.97722703,0.000005688812,0.000023754981,0.0010149551],"study_design_scores_gemma":[0.0007813284,0.000469131,0.2429963,0.000058734542,0.000015674357,0.000010711758,0.0005918023,0.028968513,0.72585976,0.0000016977957,0.000033235337,0.0002131156],"about_ca_topic_score_codex":0.00023946165,"about_ca_topic_score_gemma":0.0000780372,"teacher_disagreement_score":0.25136724,"about_ca_system_score_codex":0.00060328934,"about_ca_system_score_gemma":0.0000165148,"threshold_uncertainty_score":0.42406297},"labels":[],"label_agreement":null},{"id":"W2936919408","doi":"10.1016/j.scitotenv.2019.04.045","title":"Manipulating redox conditions to enhance in situ bioremediation of RDX in groundwater at a contaminated site","year":2019,"lang":"en","type":"article","venue":"The Science of The Total Environment","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"Ministère de la Défense Nationale; Defence Research and Development Canada","keywords":"Bioremediation; Environmental chemistry; Biodegradation; Contamination; Chemistry; Biostimulation; Microbial population biology; Groundwater; Biology; Ecology; Bacteria; Organic chemistry","score_opus":0.006316019028311543,"score_gpt":0.21623463559712888,"score_spread":0.20991861656881733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2936919408","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997861,0.0000038116757,0.0000028376337,0.00054320745,0.00010598487,0.00053478347,0.000008513623,0.0000032511496,0.00093658344],"genre_scores_gemma":[0.99905026,0.000005041506,0.0000832999,0.0000505625,0.0000041068724,0.000005388275,0.000002689266,0.000004277505,0.0007943455],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99863213,0.00006326808,0.00032050937,0.0002584627,0.00048813684,0.00023750664],"domain_scores_gemma":[0.99940306,0.000034174103,0.00017294369,0.0003440072,0.0000036376157,0.000042199856],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007349283,0.00009431685,0.00012520012,0.000057341134,0.00007085885,0.000008307789,0.00039759456,0.00003245791,0.00094780576],"category_scores_gemma":[0.000034723787,0.000058328904,0.000035990684,0.00047884046,0.00052354817,0.00015992668,0.00053098245,0.00007601677,0.0004970642],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014503977,0.000058349917,0.020330945,0.0000029128003,9.070148e-7,2.1276897e-7,0.000994323,0.015558891,0.962872,0.000009552548,0.000014623118,0.00014277073],"study_design_scores_gemma":[0.00012048162,0.000039814076,0.5480235,0.000018617799,0.0000020468633,9.523962e-7,0.00008183139,0.00094041147,0.45068717,0.000017925036,0.000010967178,0.00005624973],"about_ca_topic_score_codex":0.0003561757,"about_ca_topic_score_gemma":0.00020013751,"teacher_disagreement_score":0.52769256,"about_ca_system_score_codex":0.00045843166,"about_ca_system_score_gemma":0.000010029161,"threshold_uncertainty_score":0.9999655},"labels":[],"label_agreement":null},{"id":"W2938740701","doi":"10.1007/s11356-019-04969-7","title":"Fate and transport of estrogenic compounds in an integrated swine manure treatment systems combining algal-bacterial bioreactor and hydrothermal processes for improved water quality","year":2019,"lang":"en","type":"article","venue":"Environmental Science and Pollution Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Research Council Canada; University of Illinois at Urbana-Champaign; National Institute of Food and Agriculture; U.S. Environmental Protection Agency","keywords":"Chemistry; Bioreactor; Hydrothermal liquefaction; Zinc; Environmental chemistry; Cadmium; Biomass (ecology); Manure; Agronomy; Catalysis; Organic chemistry; Biology","score_opus":0.03048515610962191,"score_gpt":0.3011933534805143,"score_spread":0.27070819737089236,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2938740701","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987174,0.000045509038,0.0000033677125,0.00015748714,0.000043701304,0.000811827,0.00017603526,0.0000059594186,0.000038675396],"genre_scores_gemma":[0.99963194,0.00011233995,0.00005457308,0.000016084592,0.000010430046,0.000016509059,0.000060103288,0.0000059226154,0.00009207752],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99864,0.000086442604,0.00023798645,0.0003978498,0.00028990099,0.00034782785],"domain_scores_gemma":[0.9996617,0.000024575396,0.000049328755,0.000112578535,0.000009479567,0.00014236747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011762406,0.00011980285,0.00017209996,0.00008392521,0.00016075544,0.000053197244,0.00011498852,0.00006494134,0.00013783324],"category_scores_gemma":[0.000010228128,0.00008047929,0.0000133908015,0.00017505884,0.0010300826,0.00037208368,0.00006638411,0.000071841416,0.000006888651],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015493119,0.00010800205,0.14571853,0.000020072664,0.000002754679,2.3331415e-7,0.00059536984,0.000004796584,0.8519772,0.0000058244277,0.0000017680508,0.0014105221],"study_design_scores_gemma":[0.0018466645,0.0010407623,0.58868825,0.000021262977,0.000005454819,0.0000052629825,0.00087270106,0.0009931339,0.4052333,0.000010422925,0.0011097888,0.00017302632],"about_ca_topic_score_codex":0.001006877,"about_ca_topic_score_gemma":0.00024658654,"teacher_disagreement_score":0.4467439,"about_ca_system_score_codex":0.0002177086,"about_ca_system_score_gemma":0.00003511718,"threshold_uncertainty_score":0.37953824},"labels":[],"label_agreement":null},{"id":"W2939415775","doi":"10.1101/612242","title":"Sustained dechlorination of vinyl chloride to ethene in <i>Dehalococcoides</i> -enriched cultures grown without addition of exogenous vitamins and at low pH","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Ontario; University of Tennessee, Knoxville; Genome Canada; Ontario Genomics; Ontario Genomics Institute","keywords":"Cobalamin; Chemistry; Dehalococcoides; Bioaugmentation; Vinyl chloride; Food science; Environmental chemistry; Bioremediation; Population; Biochemistry; Vitamin B12; Organic chemistry; Biology; Bacteria","score_opus":0.006836876452058788,"score_gpt":0.20436636712206577,"score_spread":0.19752949067000697,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2939415775","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977389,0.000068042325,0.00016146182,0.00009247109,0.00031638137,0.0011683702,0.0003800551,0.000052633754,0.000021680364],"genre_scores_gemma":[0.99856776,0.00021165278,0.0009243991,0.00012507316,0.00006061914,0.000045045006,0.0000034692532,0.000045471505,0.000016527832],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976674,0.00009814613,0.00065581186,0.00074609264,0.00045754804,0.00037505105],"domain_scores_gemma":[0.9984328,0.000051058858,0.0005897233,0.00059701246,0.00014950498,0.00017986873],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005937293,0.00038999593,0.0005583626,0.00021154579,0.00005874472,0.000036021353,0.000359275,0.00041562057,0.00019315426],"category_scores_gemma":[0.00023070449,0.00038483602,0.00008313877,0.0005673194,0.00018852767,0.00016617718,0.0008268463,0.00027343465,0.000054541633],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013553168,0.00015432927,0.05036523,0.00025703307,0.000020303714,0.0000050878216,0.00011333095,0.00032383745,0.94845957,0.000028435576,0.00013229529,0.0000050039894],"study_design_scores_gemma":[0.0005264266,0.000066855675,0.2899501,0.00014482789,0.00002675768,1.7187205e-8,0.000014629701,0.000101345235,0.708579,0.000002046905,0.00026098607,0.0003270324],"about_ca_topic_score_codex":0.0003015394,"about_ca_topic_score_gemma":0.00013496527,"teacher_disagreement_score":0.2398806,"about_ca_system_score_codex":0.00065489666,"about_ca_system_score_gemma":0.00010039579,"threshold_uncertainty_score":0.99986035},"labels":[],"label_agreement":null},{"id":"W2940951010","doi":"10.1680/jenes.19.00002","title":"Study of microbial combination and nutrients in remediation of petroleum-contaminated soil","year":2019,"lang":"en","type":"article","venue":"Journal of Environmental Engineering and Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Ministry of Science and Technology of the People's Republic of China","keywords":"Nutrient; Bioremediation; Environmental remediation; Petroleum; Soil contamination; Nutrient agar; Environmental chemistry; Contamination; Degradation (telecommunications); Biodegradation; Bacteria; Microorganism; Environmental science; Chemistry; Food science; Biology; Agar; Ecology","score_opus":0.0030670163276538907,"score_gpt":0.17176008052054612,"score_spread":0.16869306419289223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2940951010","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9997184,0.000022324793,0.000007831493,0.000009832568,0.00010612515,0.000097537195,0.0000024781773,0.0000011602378,0.000034273813],"genre_scores_gemma":[0.9998218,0.000051073363,0.00009942647,0.000004266104,0.0000037381974,1.7744327e-7,3.8272188e-7,0.0000026912116,0.000016461558],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99917835,0.000014234159,0.00030504056,0.000109868,0.0002986562,0.000093847186],"domain_scores_gemma":[0.9996602,0.000019542744,0.00021004013,0.000056210323,0.000004676886,0.000049346865],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048141193,0.00006332174,0.00013948137,0.00012886277,0.000016226915,0.0000075631856,0.000101227604,0.000024340938,0.000042340016],"category_scores_gemma":[0.000026280504,0.000055543907,0.000013425876,0.00016552946,0.000118340264,0.00025029754,0.000067898516,0.00007316321,0.0000018731143],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014781315,0.00017407999,0.28937262,0.0000050188196,0.0000017034213,0.0000010081461,0.0005657481,0.001372341,0.708115,0.0000013839326,0.0000015232298,0.00037480178],"study_design_scores_gemma":[0.0013562501,0.00046216714,0.9316726,0.000024721277,0.000005273801,0.000010922432,0.0004716867,0.002610443,0.06331255,0.0000022970457,0.000012908272,0.00005819696],"about_ca_topic_score_codex":0.000017793549,"about_ca_topic_score_gemma":0.0000057738844,"teacher_disagreement_score":0.64480245,"about_ca_system_score_codex":0.00008389488,"about_ca_system_score_gemma":0.0000063415932,"threshold_uncertainty_score":0.22650148},"labels":[],"label_agreement":null},{"id":"W2942534770","doi":"10.2136/sssaj2018.11.0435","title":"Modelling PAH Degradation in Contaminated Soils in Canada using a Modified Process‐Based Model (DNDC)","year":2019,"lang":"en","type":"article","venue":"Soil Science Society of America Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Athabasca University","funders":"Alberta Innovates; Mitacs","keywords":"Environmental science; Soil water; Environmental chemistry; Chrysene; Soil science; Water content; Pollutant; Chemistry; Phenanthrene; Geology","score_opus":0.018025185166423097,"score_gpt":0.2323237430774627,"score_spread":0.2142985579110396,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2942534770","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98855376,0.000007062663,0.0107794115,0.00017432022,0.000067834895,0.00013412416,0.0000060065045,0.0000040026935,0.00027347181],"genre_scores_gemma":[0.99303055,0.000028316597,0.0064622858,0.00044727925,0.0000050466847,6.6467965e-7,0.0000017263575,0.000005776765,0.000018376584],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9980746,0.000036529218,0.00040835826,0.00027360936,0.000781717,0.0004251658],"domain_scores_gemma":[0.99935824,0.000023519055,0.00033009963,0.000111681526,0.00005066994,0.0001258202],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007295344,0.0001214406,0.0002014372,0.00006264893,0.00011844757,0.00003622182,0.00035898108,0.000043927135,0.00017287883],"category_scores_gemma":[0.000021997696,0.00010848108,0.00005846033,0.0012274863,0.00033854682,0.000523571,0.00004641528,0.00025409868,0.000005540237],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010490757,0.000027161277,0.030980082,0.000006196089,0.0000011408084,6.946261e-7,0.00064570195,0.85189533,0.11577537,4.4458494e-7,0.000048409183,0.0006090004],"study_design_scores_gemma":[0.0005094368,0.000020135329,0.0027090234,0.000043793334,0.0000023781756,0.00000290887,0.0018526277,0.98627204,0.0083948225,0.000049572318,0.0000050409844,0.00013822102],"about_ca_topic_score_codex":0.38653693,"about_ca_topic_score_gemma":0.099169925,"teacher_disagreement_score":0.28736702,"about_ca_system_score_codex":0.001708873,"about_ca_system_score_gemma":0.0024642202,"threshold_uncertainty_score":0.91726786},"labels":[],"label_agreement":null},{"id":"W2942813007","doi":"10.1128/aem.00086-19","title":"Potential for Microbially Mediated Natural Attenuation of Diluted Bitumen on the Coast of British Columbia (Canada)","year":2019,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Fisheries and Oceans Canada; National Research Council Canada","funders":"University of Waterloo","keywords":"Dispersant; Microcosm; Petroleum; Environmental science; Environmental chemistry; Chemistry; Dispersion (optics)","score_opus":0.002169040916252725,"score_gpt":0.14172013061199223,"score_spread":0.1395510896957395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2942813007","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976872,0.000015754857,0.000007024584,0.00012618823,0.00015237942,0.0005949285,0.0012829638,0.0000050324747,0.00012852577],"genre_scores_gemma":[0.9984134,0.000028340828,0.00008902587,0.0006091964,0.000012097014,0.0000065925233,0.0005609343,0.000010449328,0.00027000252],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99915075,0.000031125885,0.00027350252,0.00026765995,0.00008115779,0.00019578244],"domain_scores_gemma":[0.99955755,0.00008387957,0.00019189788,0.00012993506,0.0000029444839,0.000033762444],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012476953,0.00010210127,0.00020311624,0.000009675695,0.000058544243,0.000009621995,0.00015352636,0.00009287642,0.0011044317],"category_scores_gemma":[0.000005906737,0.00010554302,0.000041381867,0.000052107174,0.00030816297,0.000023168148,0.000112745605,0.000080039266,0.000029011844],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046211662,0.000057301804,0.014278364,0.000008528018,0.000020772764,3.044955e-7,0.000029333643,0.000014832331,0.9787606,0.0000050173753,0.0060572936,0.00072142214],"study_design_scores_gemma":[0.0043960656,0.0004926168,0.6165677,0.000040586925,0.00007295369,0.000051019375,0.0008755383,0.00019404576,0.35956943,0.00007607036,0.016990062,0.00067397277],"about_ca_topic_score_codex":0.029489497,"about_ca_topic_score_gemma":0.14670157,"teacher_disagreement_score":0.61919117,"about_ca_system_score_codex":0.00006745211,"about_ca_system_score_gemma":0.000015863501,"threshold_uncertainty_score":0.99980867},"labels":[],"label_agreement":null},{"id":"W2945408978","doi":"10.1016/j.chemosphere.2019.05.143","title":"Biodegradation of hydrolyzed polyacrylamide by a Bacillus megaterium strain SZK-5: Functional enzymes and antioxidant defense mechanism","year":2019,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Key Technology Research and Development Program of Shandong; National Natural Science Foundation of China","keywords":"Biodegradation; Chemistry; Bacillus megaterium; Polyacrylamide; Hydrolysis; Food science; Chromatography; Biochemistry; Organic chemistry; Bacteria; Biology","score_opus":0.0044193739894885465,"score_gpt":0.16772951594023072,"score_spread":0.16331014195074217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2945408978","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99724805,0.00008418942,0.00024723905,0.00019382422,0.0001280096,0.00018885738,0.00014648683,0.000027097902,0.0017362655],"genre_scores_gemma":[0.99714243,0.00003046291,0.0006640673,0.00017378987,0.000011611556,0.000001698388,0.00009321284,0.000009820736,0.0018728869],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99909025,0.000024591605,0.00020976445,0.00028055857,0.00022149376,0.00017332267],"domain_scores_gemma":[0.99963176,0.00001704713,0.0001176698,0.00014914382,0.000010508887,0.00007388648],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013794062,0.00013574856,0.00015242636,0.0000070293795,0.00003835077,0.000019387411,0.00008459942,0.000094840856,0.007953269],"category_scores_gemma":[0.000013366333,0.00011677473,0.000040483952,0.00011526817,0.000094762654,0.00014203138,0.00007072166,0.00006045193,0.0003156295],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035837034,0.00003239249,0.0044597792,0.0000135339005,0.000008817635,5.4734085e-7,0.00006762783,0.0000045843417,0.99192244,0.00011113538,0.0017325602,0.001610721],"study_design_scores_gemma":[0.0008184091,0.00006476642,0.013519555,0.000011838646,0.000011232309,0.000007886826,0.00013107165,0.0005315365,0.98134,0.00027131772,0.003094536,0.00019788682],"about_ca_topic_score_codex":0.0001147556,"about_ca_topic_score_gemma":0.00003436369,"teacher_disagreement_score":0.010582501,"about_ca_system_score_codex":0.00006162126,"about_ca_system_score_gemma":0.00001399847,"threshold_uncertainty_score":0.9929536},"labels":[],"label_agreement":null},{"id":"W2946182615","doi":"10.20381/ruor-23378","title":"Soil 14CO2 Source Apportionment for Biodegradation in Contaminated Soils in Permafrost Climates: A Novel Technique for Rapid Sample Collection by Barium Carbonate Precipitation","year":2019,"lang":"en","type":"dissertation","venue":"uO Research (University of Ottawa)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Permafrost; Environmental science; Carbonate; Soil water; Contamination; Barium; Barium carbonate; Environmental chemistry; Precipitation; Biodegradation; Soil science; Geology; Materials science; Ecology; Chemistry; Geography; Metallurgy; Oceanography","score_opus":0.025089961252559474,"score_gpt":0.2728131488209787,"score_spread":0.2477231875684192,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2946182615","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95937175,0.000029647756,0.020597974,0.00061883475,0.000301233,0.010254191,0.0061407075,0.00004709483,0.0026385975],"genre_scores_gemma":[0.9560671,0.00026702293,0.0031816268,0.000022379025,0.000013432925,0.000094014904,0.026858415,0.00004482236,0.013451223],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998021,0.00013775077,0.0003443197,0.000541455,0.0005294615,0.00042598587],"domain_scores_gemma":[0.9989434,0.00031213393,0.00033106114,0.00018115003,0.0001551253,0.0000771441],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016414619,0.00019004848,0.0003099818,0.0005477029,0.00020286856,0.000027701693,0.00030033596,0.00041356884,0.00032954873],"category_scores_gemma":[0.00025059562,0.00023626324,0.00009986415,0.0007298073,0.00011998504,0.00026695066,0.000056791472,0.00027837316,0.000017546094],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033978137,0.00047404188,0.022351598,0.00039197927,0.000022744785,6.3132927e-7,0.0025360908,0.00022633252,0.9652641,0.00006026741,0.0064973906,0.0018350502],"study_design_scores_gemma":[0.015677629,0.0025955846,0.36806625,0.0007845317,0.00011631887,0.000002396812,0.035098314,0.07854933,0.42588073,0.00032198202,0.07105039,0.0018565246],"about_ca_topic_score_codex":0.002098034,"about_ca_topic_score_gemma":0.024251767,"teacher_disagreement_score":0.53938335,"about_ca_system_score_codex":0.0011037174,"about_ca_system_score_gemma":0.00014174312,"threshold_uncertainty_score":0.9935531},"labels":[],"label_agreement":null},{"id":"W2947226170","doi":"10.1051/e3sconf/20199601004","title":"A review- bioremediation of oil sludge contaminated soil","year":2019,"lang":"en","type":"article","venue":"E3S Web of Conferences","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Bioremediation; Environmental science; Waste management; Contamination; Petroleum; Oil sludge; Oil refinery; Petroleum industry; Soil contamination; Sewage sludge; Petroleum product; Environmental engineering; Sewage; Chemistry; Soil water; Engineering; Ecology","score_opus":0.011124350413318987,"score_gpt":0.22378769321215813,"score_spread":0.21266334279883914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2947226170","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94867903,0.00048967876,0.0000025120007,0.00031761828,0.0001851463,0.00011751359,0.000026669606,0.0000130678345,0.05016876],"genre_scores_gemma":[0.99562377,0.0032158466,0.000048482132,0.000272652,0.000008919095,0.0000016038767,0.000024131985,0.0000032421588,0.0008013522],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99909043,0.00005087783,0.0003370853,0.00015924545,0.00024447186,0.00011790961],"domain_scores_gemma":[0.99942356,0.00004064317,0.00029742735,0.000155649,0.000040147388,0.00004255716],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00028447004,0.00009141671,0.00023515028,0.000031314812,0.000012390164,0.000004903615,0.0001986148,0.00005819877,0.011194868],"category_scores_gemma":[0.000066640554,0.00007073926,0.000051659586,0.0002044974,0.00014004752,0.00009434905,0.000051549967,0.00004925658,0.0005189561],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014990565,0.000057098438,0.16392694,0.0002220114,0.000009773267,2.1790758e-7,0.00008010351,0.0000023683442,0.8184762,0.0001640719,0.005440597,0.011605599],"study_design_scores_gemma":[0.0012452865,0.00033278437,0.19244023,0.0010465694,0.000050227354,0.0000016552865,0.0001714477,0.0004890383,0.6947704,0.0000700122,0.10900128,0.00038106993],"about_ca_topic_score_codex":0.0002060419,"about_ca_topic_score_gemma":0.0001945494,"teacher_disagreement_score":0.12370582,"about_ca_system_score_codex":0.00001728006,"about_ca_system_score_gemma":0.00010731374,"threshold_uncertainty_score":0.989709},"labels":[],"label_agreement":null},{"id":"W2948086400","doi":"10.11575/prism/36376","title":"Extraction, Analysis and the Role of Co-contaminants on Sulfolane Biodegradation","year":2019,"lang":"en","type":"dissertation","venue":"Open MIND","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Sulfolane; Biodegradation; Contamination; Extraction (chemistry); Environmental chemistry; Environmental science; Chemistry; Chromatography; Biology; Organic chemistry; Ecology","score_opus":0.009835256745524395,"score_gpt":0.2763771179052786,"score_spread":0.2665418611597542,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2948086400","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9589937,0.00003349902,0.0000018778501,0.000030395944,0.00009450513,0.0004557154,0.00008327921,5.2303614e-7,0.040306527],"genre_scores_gemma":[0.9844367,0.000097895056,0.0001010949,0.00001871007,0.000008486275,0.0000031772277,0.0012007557,0.0000060094444,0.014127155],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9990867,0.00007067402,0.0002513849,0.0002792074,0.00022022628,0.00009184041],"domain_scores_gemma":[0.9993079,0.000064182,0.00037235807,0.00021283352,0.0000132592,0.000029515117],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003640279,0.00012622467,0.00026159082,0.00006561161,0.00006647676,0.00007016568,0.00025645536,0.00012841988,0.010414463],"category_scores_gemma":[0.000028773016,0.00008255181,0.00006321159,0.00025632585,0.00006526311,0.000115707335,0.000031271764,0.00009688431,0.00091599295],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015133558,0.00020131367,0.09001927,0.000013251675,0.00041422795,0.0000013937672,0.003492141,0.000023350625,0.38290915,0.000021310023,0.00062719506,0.52076405],"study_design_scores_gemma":[0.0012554561,0.0000791698,0.4838834,0.000034021006,0.0006245797,0.0000010825996,0.0018934681,0.00028782105,0.47829214,0.000023587609,0.033343326,0.00028192357],"about_ca_topic_score_codex":0.0011780274,"about_ca_topic_score_gemma":0.003073189,"teacher_disagreement_score":0.5204821,"about_ca_system_score_codex":0.000035333247,"about_ca_system_score_gemma":0.000016332517,"threshold_uncertainty_score":0.9998619},"labels":[],"label_agreement":null},{"id":"W2948330247","doi":"10.1111/febs.14954","title":"Semi‐rational evolution of the 3‐(3‐hydroxyalkanoyloxy)alkanoate (<scp>HAA</scp>) synthase RhlA to improve rhamnolipid production in <i>Pseudomonas aeruginosa</i> and <i>Burkholderia glumae</i>","year":2019,"lang":"en","type":"article","venue":"FEBS Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; PROTEO; Institut National de la Recherche Scientifique","funders":"National Institute of General Medical Sciences; Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; National Institutes of Health; Fonds de recherche du Québec – Nature et technologies; Armand-Frappier Foundation","keywords":"Burkholderia; Chemistry; Mutant; Pseudomonas aeruginosa; Rational design; Mutagenesis; Computational biology; Biochemistry; Microbiology; Bacteria; Biology; Gene; Genetics","score_opus":0.004341154707678276,"score_gpt":0.18945405242174745,"score_spread":0.1851128977140692,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2948330247","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99571556,0.000072717376,0.000047265043,0.0009827551,0.0014424261,0.00053557876,0.000031396958,0.00001373751,0.0011585488],"genre_scores_gemma":[0.9978491,0.00005706113,0.00029321553,0.0003234334,0.00020172169,0.0000049141936,0.0000038037513,0.000014820987,0.0012519349],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980651,0.00013896167,0.0005144256,0.00037949224,0.0005472229,0.0003547595],"domain_scores_gemma":[0.9991267,0.000049100596,0.0003493176,0.0002641739,0.000044175817,0.0001665345],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00074747234,0.00019856442,0.00021768824,0.000089461224,0.00016166638,0.00006952316,0.00028256368,0.00011800829,0.0003151818],"category_scores_gemma":[0.00024391038,0.0001483406,0.000078465,0.00047021612,0.00013104099,0.0004206719,0.00019201238,0.0003362762,0.00021677768],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002543004,0.000082509025,0.1105029,0.00001096472,0.00000800436,0.0000015336095,0.0003403311,0.0005599838,0.8821252,0.00002126862,0.0055297264,0.00079216715],"study_design_scores_gemma":[0.001258108,0.00016659137,0.34111255,0.00012107227,0.000023742345,0.00021877,0.00027568286,0.00031776528,0.6474189,0.0003761135,0.00851662,0.00019407297],"about_ca_topic_score_codex":0.00009440847,"about_ca_topic_score_gemma":0.00016908327,"teacher_disagreement_score":0.23470628,"about_ca_system_score_codex":0.0003379528,"about_ca_system_score_gemma":0.00007797858,"threshold_uncertainty_score":0.6049154},"labels":[],"label_agreement":null},{"id":"W2949068689","doi":"10.1128/msystems.00038-17","title":"Vitamin and Amino Acid Auxotrophy in Anaerobic Consortia Operating under Methanogenic Conditions","year":2017,"lang":"en","type":"article","venue":"mSystems","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Svenska Forskningsrådet Formas; Vetenskapsrådet; Stiftelsen för Strategisk Forskning","keywords":"Metagenomics; Archaea; Microbial metabolism; Metabolic pathway; Bacteria; Biology; Auxotrophy; Thermophile; Alkane; Biochemistry; Chemistry; Metabolism; Gene; Genetics; Catalysis","score_opus":0.018104320770477477,"score_gpt":0.2568357665741297,"score_spread":0.23873144580365224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2949068689","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966952,0.000046295412,0.000030265515,0.00024154504,0.00020259408,0.00021234623,0.0000283898,0.00001658576,0.0025267429],"genre_scores_gemma":[0.9989989,0.000017375029,0.00020370074,0.00016225729,0.000028470053,0.000007663472,0.000010038947,0.0000074430054,0.0005641947],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991629,0.00006684837,0.00021565806,0.00024435765,0.000119445125,0.0001907981],"domain_scores_gemma":[0.9995162,0.00001782311,0.0001187048,0.00026427957,0.000004834285,0.00007813937],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022332981,0.00010371981,0.00014472856,0.000028845634,0.0002716456,0.00012850827,0.00017767515,0.00006968042,0.0006258159],"category_scores_gemma":[0.00004181305,0.000090687776,0.000024965737,0.000054984353,0.00019097891,0.00017879222,0.00011948867,0.00007628594,0.00037964567],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000001674943,0.00001708542,0.10559234,0.0000061205496,0.00000526488,0.0000058413557,0.00014124655,0.000020546582,0.8935249,0.000078671,0.00036301065,0.00024328953],"study_design_scores_gemma":[0.0008754067,0.00004783637,0.9062875,0.000047527123,0.000012383401,0.00002097702,0.00030810572,0.00059805746,0.08962688,0.000036238274,0.0018596562,0.00027941962],"about_ca_topic_score_codex":0.0007517292,"about_ca_topic_score_gemma":0.0017855739,"teacher_disagreement_score":0.80389804,"about_ca_system_score_codex":0.00008207605,"about_ca_system_score_gemma":0.000009303048,"threshold_uncertainty_score":0.6852245},"labels":[],"label_agreement":null},{"id":"W2949697270","doi":"10.3390/genes10060443","title":"Genomic Diversity of Two Hydrocarbon-Degrading and Plant Growth-Promoting Pseudomonas Species Isolated from the Oil Field of Bóbrka (Poland)","year":2019,"lang":"en","type":"article","venue":"Genes","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Thompson Rivers University","funders":"","keywords":"BTEX; Pseudomonas putida; AlkB; Pseudomonas; Microbiology; Bioaugmentation; Strain (injury); Bacteria; Dioxygenase; Bioremediation; Biology; Aromatic hydrocarbon; Chemistry; Naphthalene; Polycyclic aromatic hydrocarbon; Environmental chemistry; Food science; Biochemistry; Gene; Hydrocarbon; Xylene; Toluene; Genetics; Organic chemistry","score_opus":0.010116917901260456,"score_gpt":0.18819653727836314,"score_spread":0.17807961937710268,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2949697270","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986879,0.00013056176,0.000005254658,0.00013408768,0.0001026898,0.00005062319,0.00005165389,0.000006873389,0.00083035213],"genre_scores_gemma":[0.9994788,0.00017943258,0.00012532932,0.00008535111,0.000022922342,1.369888e-7,0.0000076415345,0.0000030986473,0.00009727972],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994823,0.000024040623,0.0001351385,0.00014145802,0.00011437374,0.00010271107],"domain_scores_gemma":[0.99967885,0.000078312514,0.00010481098,0.00010654689,0.0000044206236,0.000027029517],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011062371,0.00007170245,0.00011737979,0.000011560093,0.00007011471,0.000007813992,0.0001609319,0.00003635951,0.00051644404],"category_scores_gemma":[0.00001044184,0.00004961147,0.00003077529,0.00006364907,0.00006720371,0.00004383262,0.0003236352,0.000045124067,0.00002823925],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010725167,0.0000054622537,0.49094278,0.000003430554,0.00000649736,3.016117e-7,0.00054651726,0.0000016400019,0.5079175,0.000004298743,0.000053077438,0.00050776795],"study_design_scores_gemma":[0.00040837174,0.00005185822,0.5893945,0.000020328574,0.000018562507,0.0000020999398,0.00017950346,0.00056556973,0.4090033,0.000104489496,0.0001484581,0.00010295778],"about_ca_topic_score_codex":0.002424095,"about_ca_topic_score_gemma":0.00033121908,"teacher_disagreement_score":0.09891422,"about_ca_system_score_codex":0.0000148499485,"about_ca_system_score_gemma":0.0000035549253,"threshold_uncertainty_score":0.56547},"labels":[],"label_agreement":null},{"id":"W2950908114","doi":"10.3389/fmicb.2019.01243","title":"Microbially Enhanced Oil Recovery by Alkylbenzene-Oxidizing Nitrate-Reducing Bacteria","year":2019,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biopterre; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Shell; Alberta Innovates; Shell Global Solutions International; Suncor Energy Incorporated; ConocoPhillips","keywords":"Ethylbenzene; Toluene; Nitrate; Chemistry; Environmental chemistry; Residual oil; Biomass (ecology); Chromatography; Organic chemistry; Biology; Agronomy","score_opus":0.003047559608455137,"score_gpt":0.17743749595516975,"score_spread":0.17438993634671462,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2950908114","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99199975,0.00016428618,0.00025089167,0.00018758177,0.003060854,0.00018636657,0.00011347638,0.000044877535,0.0039919014],"genre_scores_gemma":[0.9700584,0.00039634676,0.017887745,0.0017755996,0.00006850541,0.0000072466805,0.0003996893,0.000045895205,0.009360601],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99796486,0.00016976616,0.0004705356,0.00069387024,0.000060025897,0.00064095104],"domain_scores_gemma":[0.99937457,0.000029163804,0.00018982631,0.00030974374,0.00001047089,0.00008621165],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000339349,0.00027995973,0.00039827227,0.00009535922,0.00006343904,0.000038243623,0.00042692362,0.00032264096,0.005003223],"category_scores_gemma":[0.000029222025,0.00027534246,0.00009173963,0.0002834086,0.00015876902,0.00021019191,0.00018043563,0.00025452324,0.001951457],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000090115245,0.000052554915,0.007952752,0.00001032623,0.000014948112,0.0000019061878,0.00014564519,0.000045010776,0.87438977,5.796452e-7,0.11331201,0.0039843926],"study_design_scores_gemma":[0.0009300352,0.00008201986,0.0012545142,0.000036818277,0.000007300305,0.000012851511,0.000103367696,0.000018276372,0.92464054,0.000019615265,0.07246584,0.0004288199],"about_ca_topic_score_codex":0.00019390277,"about_ca_topic_score_gemma":0.00013848495,"teacher_disagreement_score":0.05025079,"about_ca_system_score_codex":0.0003831512,"about_ca_system_score_gemma":0.00003465491,"threshold_uncertainty_score":0.9999699},"labels":[],"label_agreement":null},{"id":"W2955156460","doi":"10.1007/s00253-019-09985-8","title":"Reductive dechlorination of 1,2-dichloroethane in the presence of chloroethenes and 1,2-dichloropropane as co-contaminants","year":2019,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Ministerie van Onderwijs, Cultuur en Wetenschap; Wageningen University and Research; China Scholarship Council; Ministerie van Economische Zaken","keywords":"Reductive dechlorination; Chemistry; Dehalococcoides; Vinyl chloride; 1,2-Dichloroethane; Tetrachloroethylene; Biodegradation; Kinetics; Enrichment culture; Electron donor; Geobacter; Environmental chemistry; Trichloroethylene; Bacteria; Organic chemistry; Catalysis","score_opus":0.005753935327205322,"score_gpt":0.21525590974171893,"score_spread":0.2095019744145136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2955156460","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977514,0.00013131424,0.00000641376,0.0006416484,0.000057769783,0.000498592,0.000019885329,0.000013186742,0.00087978196],"genre_scores_gemma":[0.99921674,0.00041631173,0.00015008339,0.00013115932,0.0000050435738,0.0000075433995,0.000015408239,0.0000049126756,0.00005280099],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99906206,0.000053803316,0.0002826256,0.00033911224,0.000054896645,0.00020749014],"domain_scores_gemma":[0.99944746,0.0001113003,0.00019735252,0.0002158217,0.000009804541,0.000018249042],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004174224,0.00013576864,0.00026886782,0.00009330482,0.00003305294,0.000002949845,0.00024864808,0.00037549602,0.00015247232],"category_scores_gemma":[0.000040411593,0.000093025556,0.000018089637,0.00024624163,0.0012313013,0.00004510839,0.00015662257,0.00019015609,0.000041100673],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014999168,0.00006355862,0.015432756,0.000018963634,0.000009250799,0.0000013251912,0.0005600878,0.0000011061329,0.97657573,0.0021090852,0.000043980817,0.00503415],"study_design_scores_gemma":[0.00067439524,0.00026348414,0.02613416,0.000012460332,0.000009376465,0.00007920719,0.0008220149,0.000003978697,0.97005886,0.0006679112,0.0011657559,0.00010842215],"about_ca_topic_score_codex":0.00016318416,"about_ca_topic_score_gemma":0.00011576395,"teacher_disagreement_score":0.010701403,"about_ca_system_score_codex":0.000017212358,"about_ca_system_score_gemma":0.000010579501,"threshold_uncertainty_score":0.4536781},"labels":[],"label_agreement":null},{"id":"W2955609593","doi":"10.1021/acs.est.9b01152","title":"Mass Transfer Limitation during Slow Anaerobic Biodegradation of 2-Methylnaphthalene","year":2019,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"FP7 Food, Agriculture and Fisheries, Biotechnology; FP7 Ideas: European Research Council; Deutsche Forschungsgemeinschaft","keywords":"Biodegradation; Chemistry; Environmental chemistry; Fractionation; Bioavailability; Isotope fractionation; Sulfate; Isotopes of carbon; Hexadecane; Carbon fibers; Isotope analysis; Aqueous solution; Isotope; Hydrocarbon; Chromatography; Total organic carbon; Organic chemistry; Ecology","score_opus":0.004658439829015135,"score_gpt":0.18675695757029143,"score_spread":0.18209851774127628,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2955609593","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99793655,0.000020337331,0.00015689335,0.00025812344,0.000112381356,0.0003161541,0.000016954038,0.000054472166,0.001128114],"genre_scores_gemma":[0.9976659,0.00005537723,0.0017484516,0.00003868746,0.0000054964294,0.0000048730503,0.000012466853,0.000008963044,0.00045980533],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984068,0.000022642134,0.00028487798,0.0004859052,0.00045005028,0.00034969146],"domain_scores_gemma":[0.99950194,0.0000111656045,0.00008981968,0.00032368072,0.0000033383985,0.00007005164],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003027259,0.00014578493,0.00015368019,0.00028183032,0.00012337048,0.000009121499,0.00046722568,0.00013335932,0.0026967197],"category_scores_gemma":[0.000017015476,0.00013360826,0.000046738063,0.0011068531,0.0012227979,0.00041537036,0.0001388074,0.0001198542,0.001574506],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000073770366,0.000050691073,0.17180942,0.0000028435943,0.0000020400496,7.962459e-7,0.000067999186,0.00011763928,0.8263677,0.00006060725,0.0000065650243,0.0015063288],"study_design_scores_gemma":[0.00030374227,0.0000957993,0.23823096,0.0000054308443,0.000004290171,0.000005796304,0.0001857921,0.00009487562,0.76054156,0.000104416904,0.0002939797,0.00013335206],"about_ca_topic_score_codex":0.000014245836,"about_ca_topic_score_gemma":0.0000068966865,"teacher_disagreement_score":0.06642154,"about_ca_system_score_codex":0.0003220013,"about_ca_system_score_gemma":0.000011497251,"threshold_uncertainty_score":0.9992029},"labels":[],"label_agreement":null},{"id":"W2955840681","doi":"10.1039/c9ra02784j","title":"Fly ash based robust biocatalyst generation: a sustainable strategy towards enhanced green biosurfactant production and waste utilization","year":2019,"lang":"en","type":"article","venue":"RSC Advances","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; McGill University; Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Fisheries and Oceans Canada; Canada Foundation for Innovation","keywords":"Sustainable production; Production (economics); Waste management; Environmental science; Pulp and paper industry; Chemistry; Biochemical engineering; Engineering; Economics","score_opus":0.02103076081517872,"score_gpt":0.23634619014873476,"score_spread":0.21531542933355605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2955840681","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99443066,0.00028185846,0.001079097,0.0005118604,0.00027855943,0.00059049315,0.000015420488,0.000058996207,0.0027530668],"genre_scores_gemma":[0.9945573,0.00020412843,0.0010545901,0.00013040859,0.00009487462,0.000007736781,0.00008376386,0.00001231009,0.003854848],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99868804,0.000049613755,0.00023115505,0.00048373506,0.00027032418,0.00027711235],"domain_scores_gemma":[0.9995037,0.000008523169,0.0001387597,0.0002076098,0.000043182983,0.00009825413],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00022155695,0.0001710683,0.00014911978,0.000046100788,0.00014558766,0.000065913606,0.000110446694,0.0000732181,0.0013627886],"category_scores_gemma":[0.00005023205,0.00014442916,0.000028518487,0.00037021987,0.00010214423,0.00077429164,0.000060813527,0.00006462503,0.00016805802],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003538592,0.00005489402,0.004065497,0.000060397408,0.0000059212202,0.0000017666953,0.00012367404,0.010978053,0.96831644,0.000036063855,0.00042997836,0.015891936],"study_design_scores_gemma":[0.00042397412,0.00018580192,0.0036624041,0.000020567353,0.000014390015,0.0000034031598,0.0008158949,0.006784916,0.9777695,0.00004735518,0.009930507,0.0003413051],"about_ca_topic_score_codex":0.00012952201,"about_ca_topic_score_gemma":0.0004425851,"teacher_disagreement_score":0.01555063,"about_ca_system_score_codex":0.00011526471,"about_ca_system_score_gemma":0.00004552855,"threshold_uncertainty_score":0.9995501},"labels":[],"label_agreement":null},{"id":"W2957608375","doi":"10.3389/fmicb.2018.00672","title":"Aerobic Growth of Rhodococcus aetherivorans BCP1 Using Selected Naphthenic Acids as the Sole Carbon and Energy Sources","year":2018,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Università di Bologna","keywords":"Rhodococcus; Chemistry; Biochemistry; Polyunsaturated fatty acid; Fatty acid; Bacteria; Intracellular; Food science; Biology; Enzyme","score_opus":0.005654536754202048,"score_gpt":0.1974452952703669,"score_spread":0.19179075851616484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2957608375","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99826103,0.0002445791,0.00028826323,0.00013992627,0.00039390996,0.00009494953,0.000010166252,0.000014518228,0.00055263494],"genre_scores_gemma":[0.9973361,0.00008557692,0.0019404788,0.0003365737,0.00004015856,0.0000011806936,0.000009005412,0.000011883229,0.00023903354],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99888474,0.00021417001,0.00025063206,0.00029352633,0.0000466592,0.00031029855],"domain_scores_gemma":[0.9996216,0.000025812953,0.00013026124,0.00016176862,0.000021051266,0.000039462855],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022039528,0.00015214254,0.0002244392,0.00006389364,0.000085844,0.0000095261485,0.00026865865,0.00017057615,0.00023438329],"category_scores_gemma":[0.00003391785,0.000108586304,0.000033289245,0.0003900556,0.0011121886,0.000040573,0.00013197596,0.00010423263,0.000010390598],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047272224,0.000020661633,0.15697455,0.000002601558,0.000015808602,7.8485715e-7,0.00073630083,0.0000040201694,0.84092426,0.0000062417885,0.00085073936,0.00041677026],"study_design_scores_gemma":[0.00102478,0.00033807624,0.026053702,0.000027389608,0.000038794627,0.000062331244,0.0004647829,0.0008253441,0.9541393,0.00036691676,0.016251264,0.0004073295],"about_ca_topic_score_codex":0.00163818,"about_ca_topic_score_gemma":0.00077007385,"teacher_disagreement_score":0.13092084,"about_ca_system_score_codex":0.00007855798,"about_ca_system_score_gemma":0.000025770938,"threshold_uncertainty_score":0.44280207},"labels":[],"label_agreement":null},{"id":"W2961493462","doi":"10.1016/j.jenvman.2019.07.029","title":"Simultaneous removal of polycyclic aromatic hydrocarbons and heavy metals from natural soil by combined non-ionic surfactants and EDTA as extracting reagents: Laboratory column tests","year":2019,"lang":"en","type":"article","venue":"Journal of Environmental Management","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Iran University of Science and Technology","keywords":"Reagent; Environmental chemistry; Heavy metals; Chemistry; Ionic bonding; Chromatography; Organic chemistry; Ion","score_opus":0.0026175078422544474,"score_gpt":0.1906756506672333,"score_spread":0.18805814282497885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2961493462","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997973,0.0006868921,0.000004244056,0.00013265146,0.00024532873,0.00035327056,0.000040544386,0.00000681762,0.0005572048],"genre_scores_gemma":[0.9973445,0.0008714152,0.00072126795,0.00025928614,0.00001665923,8.186696e-7,0.000012591713,0.000020876721,0.00075259764],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980955,0.00009138653,0.00066072505,0.00031061246,0.00058184593,0.00025993487],"domain_scores_gemma":[0.99873424,0.00015537809,0.0007151278,0.00021596254,0.0000013754742,0.00017791578],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035300836,0.00023819682,0.0003899931,0.000063985426,0.00007918876,0.00004532406,0.00021870171,0.000077652236,0.000384701],"category_scores_gemma":[0.000034092296,0.00021313384,0.00007185942,0.00011805139,0.00018272254,0.00033581507,0.0002524228,0.00020286921,0.000101134385],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023320538,0.00037355948,0.030925546,0.000018282764,0.00019526007,0.00016153672,0.00020084204,0.000041151776,0.9627164,5.149662e-7,0.00038142386,0.0047522495],"study_design_scores_gemma":[0.011327659,0.0021773952,0.7801694,0.00053423713,0.00085769297,0.00045066598,0.0036726135,0.005062751,0.18695305,0.00036308373,0.0068641747,0.0015672483],"about_ca_topic_score_codex":0.00010230933,"about_ca_topic_score_gemma":0.000023366589,"teacher_disagreement_score":0.7757634,"about_ca_system_score_codex":0.0001962513,"about_ca_system_score_gemma":0.0000070346937,"threshold_uncertainty_score":0.86913455},"labels":[],"label_agreement":null},{"id":"W2961548151","doi":"10.1080/15226514.2019.1583637","title":"Potential use of endophytic root bacteria and host plants to degrade hydrocarbons","year":2019,"lang":"en","type":"article","venue":"International Journal of Phytoremediation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Phytoremediation; Stenotrophomonas; Biology; Bioremediation; Environmental remediation; Pseudomonas; Bioaugmentation; Flavobacterium; Microorganism; Inoculation; Biomass (ecology); Soil contamination; Bacteria; Botany; Soil water; Horticulture; Contamination; Agronomy","score_opus":0.00773621516732906,"score_gpt":0.2142728287858873,"score_spread":0.20653661361855824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2961548151","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975631,0.000010852892,0.00017221675,0.00042225287,0.0015847825,0.00011028414,0.000036767753,0.000004116142,0.00009562218],"genre_scores_gemma":[0.9986763,0.000027178838,0.0008391715,0.00016702522,0.0002095296,4.405054e-7,0.000009543466,0.000006987258,0.0000638188],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99882233,0.00003268348,0.00038168795,0.00011800643,0.0005406275,0.0001046452],"domain_scores_gemma":[0.99934244,0.000046559835,0.00038858512,0.00007084162,0.000049786686,0.000101791506],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015921789,0.000089231595,0.00013863102,0.00011625552,0.000013005918,0.000037340626,0.00019325688,0.000047098863,0.0005224245],"category_scores_gemma":[0.00009624114,0.000077334924,0.000054175558,0.00007521962,0.000033292254,0.000393466,0.00006783921,0.00007850566,0.0001123712],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012804232,0.000048907572,0.18925393,0.0000020423402,0.000027979895,0.000006015491,0.00018087735,0.00013014524,0.8082593,0.000008175728,0.00074713485,0.0012074664],"study_design_scores_gemma":[0.00067583343,0.00014381074,0.8487827,0.000034269433,0.000011416819,0.0000398628,0.000021873513,0.00033320588,0.14775456,0.000042257376,0.0020631207,0.00009707372],"about_ca_topic_score_codex":0.000040886855,"about_ca_topic_score_gemma":0.00004280163,"teacher_disagreement_score":0.6605047,"about_ca_system_score_codex":0.000106015475,"about_ca_system_score_gemma":0.000020694057,"threshold_uncertainty_score":0.5720182},"labels":[],"label_agreement":null},{"id":"W29633485","doi":"10.1023/a:1015038901626","title":"Detection of intermediate metabolites of benzene biodegradation under microaerophilic conditions","year":2001,"lang":"en","type":"article","venue":"Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Biotechnology Research Institute","funders":"National Research Council Canada","keywords":"Biodegradation; Benzene; Microaerophile; Catechol; Chemistry; Hydroquinone; Phenol; Cometabolism; Metabolite; Naphthalene; Organic chemistry; Environmental chemistry; Bioremediation; Biochemistry; Bacteria; Biology","score_opus":0.013492558968755812,"score_gpt":0.22921682456066095,"score_spread":0.21572426559190513,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W29633485","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968298,0.0000627656,0.002069044,0.00014214653,0.0001960904,0.00019334424,0.00009419559,0.00002981884,0.0003828051],"genre_scores_gemma":[0.99891955,0.000196437,0.00037763547,0.00006552673,0.000028708782,0.000003910045,0.0002486614,0.000008274501,0.00015132502],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99893284,0.00006508618,0.00041507365,0.00021170572,0.0002321029,0.00014318018],"domain_scores_gemma":[0.9993562,0.00003285616,0.0003285071,0.00018762564,0.000042446016,0.00005235432],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018660989,0.00012155087,0.00016234076,0.00011562158,0.000058205158,0.0000109560315,0.00012591125,0.000090264344,0.0010615144],"category_scores_gemma":[0.00004507934,0.00010989243,0.00007146797,0.0004959957,0.00016869819,0.00027145742,0.000042694315,0.000054435037,0.00013187637],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027474467,0.00009294472,0.016542096,0.0000067658852,0.0000117533245,1.6997754e-7,0.00006126876,0.000026417325,0.9736662,0.000086333894,0.00012994395,0.009348663],"study_design_scores_gemma":[0.00033889688,0.00005362141,0.25944725,0.000008833539,0.000025342822,0.000002896431,0.00006131304,0.00022465033,0.738286,0.00023590718,0.0012200283,0.000095266805],"about_ca_topic_score_codex":0.0003125769,"about_ca_topic_score_gemma":0.00031441546,"teacher_disagreement_score":0.24290514,"about_ca_system_score_codex":0.0000721489,"about_ca_system_score_gemma":0.00001155279,"threshold_uncertainty_score":0.99985164},"labels":[],"label_agreement":null},{"id":"W2964687200","doi":"10.3389/fmicb.2019.01862","title":"Catabolism of Alkylphenols in Rhodococcus via a Meta-Cleavage Pathway Associated With Genomic Islands","year":2019,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Genome British Columbia; Génome Québec; Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Catabolism; Rhodococcus; Biology; Metagenomics; Cleavage (geology); Chemistry; Genetics; Computational biology; Biochemistry; Bacteria; Metabolism; Gene","score_opus":0.00683311068721045,"score_gpt":0.18120992947309766,"score_spread":0.1743768187858872,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2964687200","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974713,0.0002088113,0.00011782803,0.000059995346,0.00034410643,0.0004207863,0.00015236868,0.000012791389,0.0012120614],"genre_scores_gemma":[0.99769086,0.00003218968,0.0014054842,0.00030211324,0.000006990812,0.0000068019235,0.00011747884,0.000014482158,0.0004235926],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99861026,0.0001828791,0.00037982967,0.00038589368,0.000058063786,0.00038304614],"domain_scores_gemma":[0.9994792,0.000033969143,0.00020525685,0.00023453016,0.0000074105183,0.00003965922],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00041272808,0.00018934261,0.00055905274,0.0001223028,0.000016119144,0.0000054235034,0.00029534567,0.00020650172,0.0012158711],"category_scores_gemma":[0.00002256472,0.00014415811,0.00006901709,0.00034625913,0.00019731249,0.00007393829,0.000110392386,0.0001848884,0.00017787478],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038839662,0.00006327518,0.42088416,0.0000031600741,0.000054155364,0.00000382521,0.00042283704,0.000038160797,0.5758452,9.5056527e-7,0.002355224,0.00029021784],"study_design_scores_gemma":[0.004865033,0.0003288355,0.7337634,0.00003790341,0.00011991526,0.000017700559,0.00037674842,0.00018762388,0.24283546,0.00016119803,0.016536409,0.00076975237],"about_ca_topic_score_codex":0.00022499032,"about_ca_topic_score_gemma":0.0010835676,"teacher_disagreement_score":0.33300975,"about_ca_system_score_codex":0.00020743934,"about_ca_system_score_gemma":0.000027323653,"threshold_uncertainty_score":0.99969715},"labels":[],"label_agreement":null},{"id":"W2965483233","doi":"10.1016/j.jare.2019.07.003","title":"Evaluating rhamnolipid-enhanced washing as a first step in remediation of drill cuttings and petroleum-contaminated soils","year":2019,"lang":"en","type":"article","venue":"Journal of Advanced Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Northern British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; University of Northern British Columbia","keywords":"Drill cuttings; Petroleum; Environmental remediation; Contamination; Environmental science; Soil water; Soil contamination; Cutting; Hydrocarbon; Pollution; Environmental chemistry; Environmental pollution; Soil test; Environmental engineering; Pulp and paper industry; Chemistry; Drilling fluid; Drilling; Botany; Soil science; Materials science; Engineering; Environmental protection; Metallurgy; Ecology; Biology","score_opus":0.027603346481050724,"score_gpt":0.35424006207506087,"score_spread":0.32663671559401014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2965483233","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972715,0.00007736192,0.000026093525,0.00036777538,0.00012487253,0.00024690584,0.00000145769,0.0000038612347,0.0018801938],"genre_scores_gemma":[0.9970857,0.0003032441,0.0021550914,0.000038443657,0.000037809856,0.0000013807966,0.0000012407835,0.000010073753,0.00036699674],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99759114,0.0002230046,0.00060081837,0.00020728148,0.0010443536,0.0003334089],"domain_scores_gemma":[0.99877936,0.00036353394,0.00045491065,0.00013409254,0.00015670733,0.0001113924],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0035564667,0.00009882311,0.00025600792,0.00023492998,0.00007028858,0.000029632343,0.00022670554,0.00007966044,0.00036513997],"category_scores_gemma":[0.0012527631,0.00008160783,0.000045334837,0.00048854016,0.00011430354,0.00050749513,0.00013525892,0.00047302077,0.000067140485],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025374154,0.00005580273,0.018831301,0.000036180078,0.000006083545,0.0000029566033,0.0011094516,0.0020541407,0.95732677,0.000004592159,0.00012514782,0.02019386],"study_design_scores_gemma":[0.007961996,0.0027201572,0.22317514,0.00103508,0.000014347801,0.000046045658,0.0048892633,0.0114513915,0.7451393,0.00042354807,0.0027570885,0.00038662183],"about_ca_topic_score_codex":0.000088896784,"about_ca_topic_score_gemma":0.00022037062,"teacher_disagreement_score":0.21218742,"about_ca_system_score_codex":0.00030521193,"about_ca_system_score_gemma":0.000060758182,"threshold_uncertainty_score":0.39980265},"labels":[],"label_agreement":null},{"id":"W2965912390","doi":"10.11159/icepr19.154","title":"Bioremediation to Treat the World’s Worst Ever Recorded Oil Contamination Case","year":2019,"lang":"en","type":"article","venue":"Proceedings of the World Congress on New Technologies","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Kuwait University","keywords":"Bioremediation; Contamination; Environmental science; Computer science; Waste management; Engineering; Biology; Ecology","score_opus":0.009554570157827024,"score_gpt":0.22252998580404773,"score_spread":0.21297541564622072,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2965912390","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.965033,0.000016066464,3.837087e-7,0.018852977,0.00059490226,0.00047833676,0.0000082974,0.00023104498,0.014785004],"genre_scores_gemma":[0.93136275,0.000027248745,0.0002639901,0.0004248579,0.00002446653,0.000017511837,0.0000011366257,0.000013191094,0.06786485],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987229,0.00000949497,0.000288971,0.00035481283,0.00035965687,0.0002641727],"domain_scores_gemma":[0.99922365,0.0000931852,0.00032196546,0.00027781542,0.000040326795,0.00004308256],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025483826,0.00020191827,0.00018841469,0.00019781922,0.00014110771,0.000071367846,0.00079439435,0.00009072516,0.00039901995],"category_scores_gemma":[0.00027366434,0.0001146684,0.000074250514,0.0013626014,0.00022042223,0.0002149558,0.0004060177,0.00021681671,0.0003510989],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022458553,0.00012415138,0.13275422,0.00004301552,0.000026763546,0.0000044575445,0.0004094631,0.000026200281,0.45564705,0.0020293072,0.19320828,0.21550252],"study_design_scores_gemma":[0.00067260634,0.00010867297,0.011071048,0.00013818427,0.000030496305,0.000016866601,0.0008333073,0.00008386582,0.91646713,0.0004664455,0.06981775,0.0002936048],"about_ca_topic_score_codex":0.00011440382,"about_ca_topic_score_gemma":0.0018290054,"teacher_disagreement_score":0.46082008,"about_ca_system_score_codex":0.00020121135,"about_ca_system_score_gemma":0.000012114836,"threshold_uncertainty_score":0.46760416},"labels":[],"label_agreement":null},{"id":"W2966057361","doi":"10.7717/peerj.7389","title":"Bioremediation of engine-oil contaminated soil using local residual organic matter","year":2019,"lang":"en","type":"article","venue":"PeerJ","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Bioremediation; Environmental remediation; Environmental science; Manure; Organic matter; Fertilizer; Total petroleum hydrocarbon; Waste management; Residual oil; Environmental engineering; Contamination; Soil contamination; Environmental chemistry; Pulp and paper industry; Agronomy; Soil water; Chemistry; Soil science; Biology; Ecology","score_opus":0.005727637627791896,"score_gpt":0.19452306654353216,"score_spread":0.18879542891574025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2966057361","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974995,0.00000788625,0.00020629723,0.00020617183,0.00021242973,0.00006356874,0.000015952917,0.000019070252,0.0017691008],"genre_scores_gemma":[0.998291,0.0000066755997,0.00024335607,0.00022336109,0.00002652328,3.473915e-7,0.000025651305,0.000010149433,0.0011729293],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991952,0.00002915567,0.00019745715,0.00017556056,0.00023890904,0.00016372831],"domain_scores_gemma":[0.9996759,0.000018960905,0.00009593252,0.00014425104,0.000016462416,0.000048452337],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00015406718,0.000090282534,0.00012307438,0.00003173963,0.00002182132,0.00000914626,0.000111741865,0.000076979966,0.016177503],"category_scores_gemma":[0.000016987697,0.00007969799,0.000028382077,0.00017901657,0.000073625575,0.000099609584,0.000067416906,0.00006320706,0.003445695],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010853849,0.000024714402,0.11296663,0.000010673372,0.000004128387,6.8787386e-7,0.00015869271,0.00014244729,0.8834354,0.000001257206,0.0009213244,0.0023231907],"study_design_scores_gemma":[0.000637652,0.0000415061,0.18686786,0.000015253288,0.000015558695,0.00000434027,0.00013163593,0.0034208342,0.8073268,0.000008482021,0.0013435618,0.00018654566],"about_ca_topic_score_codex":0.00022405508,"about_ca_topic_score_gemma":0.000103176026,"teacher_disagreement_score":0.076108634,"about_ca_system_score_codex":0.000100053476,"about_ca_system_score_gemma":0.000014506514,"threshold_uncertainty_score":0.99733025},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"agree"},{"id":"W2966323349","doi":"10.7287/peerj.7389v0.1/reviews/1","title":"Peer Review #1 of \"Bioremediation of engine-oil contaminated soil using local residual organic matter (v0.1)\"","year":2019,"lang":"en","type":"peer-review","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Strong","keywords":"Bioremediation; Residual; Environmental science; Organic matter; Residual oil; Contamination; Environmental chemistry; Petroleum engineering; Computer science; Chemistry; Biology; Ecology; Geology","score_opus":0.01963197143066845,"score_gpt":0.26363753035979776,"score_spread":0.2440055589291293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2966323349","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06270105,0.2372529,0.0019439781,0.39204282,0.019349238,0.01033709,0.010213473,0.00043939668,0.26572004],"genre_scores_gemma":[0.012883197,0.11504792,0.00080471893,0.018903138,0.00023990277,0.000008579922,0.0050824983,0.00012675949,0.84690326],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9960123,0.00017580704,0.001278863,0.00051448785,0.0016903209,0.00032827412],"domain_scores_gemma":[0.9977033,0.00006915503,0.0010432863,0.0005855034,0.00049435534,0.000104370934],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0014364187,0.0004127698,0.0011060848,0.000080485624,0.00002607842,0.0000094419,0.0004841343,0.0003768496,0.09091513],"category_scores_gemma":[0.0004718009,0.00032732822,0.00022165681,0.0004937266,0.00022152781,0.000118281474,0.00027556688,0.00031758516,0.0022406655],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000063504654,0.000060224447,0.00038039952,0.01690547,0.00003383672,0.0000013924595,0.000026255291,0.000004559778,0.046192367,5.13436e-7,0.93215704,0.004231606],"study_design_scores_gemma":[0.0005965904,0.00008694942,0.0012788863,0.028847,0.0005147637,0.000014881295,0.000026913596,0.000105028645,0.04828419,0.0000016657136,0.919501,0.00074214314],"about_ca_topic_score_codex":0.00061664515,"about_ca_topic_score_gemma":0.0003327916,"teacher_disagreement_score":0.58118325,"about_ca_system_score_codex":0.00028918165,"about_ca_system_score_gemma":0.00014913069,"threshold_uncertainty_score":0.99991786},"labels":[],"label_agreement":null},{"id":"W2969559895","doi":"10.1016/j.scitotenv.2019.134066","title":"Use of dual element isotope analysis and microcosm studies to determine the origin and potential anaerobic biodegradation of dichloromethane in two multi-contaminated aquifers","year":2019,"lang":"en","type":"article","venue":"The Science of The Total Environment","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; University of Waterloo","funders":"Agencia Estatal de Investigación; European Regional Development Fund; Universitat Autònoma de Barcelona; Ministerio de Ciencia e Innovación; Generalitat de Catalunya; European Commission","keywords":"Microcosm; Environmental chemistry; Biodegradation; Reductive dechlorination; Bioremediation; Chemistry; Aquifer; Isotope analysis; Dichloromethane; Groundwater; Contamination; Geology; Ecology; Organic chemistry","score_opus":0.021568771131793958,"score_gpt":0.2525286387494474,"score_spread":0.23095986761765347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2969559895","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99887717,0.000038327995,0.000019065435,0.00043788317,0.000050782593,0.0005493067,0.000022334287,0.0000015554245,0.0000035828189],"genre_scores_gemma":[0.99886507,0.00011602076,0.000801584,0.000029345785,0.0000022236661,0.0000034322693,0.0000011401603,0.0000029129278,0.00017828138],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987575,0.000087817025,0.00031714918,0.0002549626,0.00040649722,0.00017608191],"domain_scores_gemma":[0.99935156,0.0000533566,0.00022620353,0.00032021102,0.00000780722,0.000040863943],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00087997806,0.000111379726,0.00020766424,0.00008778437,0.00007857687,0.000013025022,0.00027784944,0.00001616873,0.00009868052],"category_scores_gemma":[0.000038243008,0.000055398774,0.00004698492,0.0006642825,0.0012405412,0.00014059596,0.000603961,0.00005507361,0.000006470768],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002865067,0.00006103658,0.01683609,0.0000043354444,0.000035923375,1.5939523e-7,0.000993159,0.008945203,0.9718609,0.0000030283372,0.0000038655908,0.0012276467],"study_design_scores_gemma":[0.00037207798,0.00008910636,0.56124246,0.000011175776,0.000082121325,0.0000015414619,0.00044798508,0.0034283812,0.434241,0.0000046586197,0.000009356329,0.00007013934],"about_ca_topic_score_codex":0.00082869455,"about_ca_topic_score_gemma":0.00016534801,"teacher_disagreement_score":0.54440635,"about_ca_system_score_codex":0.000098775214,"about_ca_system_score_gemma":0.000008767644,"threshold_uncertainty_score":0.45708257},"labels":[],"label_agreement":null},{"id":"W2969958740","doi":"10.1021/acs.est.9b02339","title":"Sustained Dechlorination of Vinyl Chloride to Ethene in <i>Dehalococcoides</i> -Enriched Cultures Grown without Addition of Exogenous Vitamins and at Low pH","year":2019,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Ontario; Ontario Genomics Institute; Genome Canada","keywords":"Dehalococcoides; Chemistry; Bioremediation; Cobalamin; Vinyl chloride; Bioaugmentation; Reductive dechlorination; Corrinoid; Environmental chemistry; Food science; Biochemistry; Biodegradation; Vitamin B12; Organic chemistry; Biology; Bacteria","score_opus":0.0028802061340050915,"score_gpt":0.19961138403424064,"score_spread":0.19673117790023556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2969958740","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99863315,0.000016893184,0.00003073898,0.00023060995,0.00006954037,0.0005484656,0.00003156246,0.00002511625,0.00041394006],"genre_scores_gemma":[0.99921507,0.00006372784,0.00041723688,0.000086468004,0.00000540974,0.000012342773,0.000011846635,0.000008179988,0.0001797074],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984362,0.000019820784,0.0003192285,0.00048039248,0.00040312673,0.00034119064],"domain_scores_gemma":[0.99942994,0.000018371986,0.00018676759,0.00027237186,0.000006405657,0.000086131935],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003698821,0.00015422281,0.00021919566,0.0002939798,0.000083573366,0.000007786727,0.00037238948,0.00014133229,0.000728167],"category_scores_gemma":[0.000059190912,0.00013764201,0.000026706972,0.0009822736,0.0013567266,0.00025645507,0.00066313084,0.00010413348,0.0001336104],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039812407,0.00010609507,0.15832034,0.0000060021375,0.0000013820686,0.0000012999197,0.00040654288,0.00009719697,0.8390762,0.0000603803,0.000012415228,0.0018723042],"study_design_scores_gemma":[0.00041872237,0.00021380477,0.20526576,0.000011359793,0.000003680313,0.000007635721,0.0007244842,0.00007324618,0.7927082,0.00014837572,0.00028797076,0.00013671877],"about_ca_topic_score_codex":0.00008101405,"about_ca_topic_score_gemma":0.00015734059,"teacher_disagreement_score":0.046945427,"about_ca_system_score_codex":0.00061341084,"about_ca_system_score_gemma":0.000014011455,"threshold_uncertainty_score":0.79729176},"labels":[],"label_agreement":null},{"id":"W2972297170","doi":"10.1016/j.chemosphere.2019.124796","title":"Biodegradation potential assessment by using autochthonous microorganisms from the sediments from Lac Mégantic (Quebec, Canada) contaminated with light residual oil","year":2019,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"National Research Council Canada; Environment and Climate Change Canada","funders":"Government of Canada; American Society for Metabolic and Bariatric Surgery","keywords":"Biodegradation; Environmental chemistry; Petroleum; Microorganism; Contamination; Residual oil; Chemistry; Degradation (telecommunications); Microbial biodegradation; Light crude oil; Hydrocarbon; Sediment; Fuel oil; Microcosm; Environmental science; Geology; Ecology; Organic chemistry; Biology; Bacteria","score_opus":0.0033012266334725413,"score_gpt":0.17525017020928688,"score_spread":0.17194894357581433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2972297170","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965347,0.000049877675,0.000112660244,0.0019270872,0.00031925546,0.00020391389,0.00022714086,0.00003363093,0.0005917385],"genre_scores_gemma":[0.99411565,0.0000075596854,0.0013162317,0.0008963164,0.000051739957,0.0000017741733,0.0005253402,0.000023712855,0.0030616703],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984811,0.00006447287,0.00023183324,0.00043551152,0.00050517375,0.0002819072],"domain_scores_gemma":[0.99935293,0.000033742188,0.00018124588,0.00031815798,0.000019468209,0.00009447698],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008005782,0.00021937415,0.00018575332,0.0000028743063,0.00015661107,0.000097695985,0.00030218062,0.000111590125,0.0088679325],"category_scores_gemma":[0.000005579974,0.00015032597,0.00002620515,0.000151627,0.000071448965,0.00015009296,0.00011183139,0.0001621137,0.00019838798],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030334282,0.000050485978,0.04127726,0.000002499051,0.000039679864,0.0000073109277,0.00010808584,0.000034882847,0.92918193,3.453364e-7,0.027927212,0.0013399966],"study_design_scores_gemma":[0.0015912025,0.000035102534,0.12921548,0.000046174067,0.000086784166,0.0000026941427,0.00056140486,0.0011086293,0.85271996,0.000005332748,0.014193454,0.00043379373],"about_ca_topic_score_codex":0.6518406,"about_ca_topic_score_gemma":0.5512646,"teacher_disagreement_score":0.100576,"about_ca_system_score_codex":0.0006153181,"about_ca_system_score_gemma":0.00022135513,"threshold_uncertainty_score":0.9920381},"labels":[],"label_agreement":null},{"id":"W2973196759","doi":"10.1101/770354","title":"Microbial Communities Associated with Sustained Anaerobic Reductive Dechlorination of α-, β-, γ-, and δ-Hexachlorocyclohexane Isomers to Monochlorobenzene and Benzene","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada; Government of Ontario; China Scholarship Council; Genome Canada; Ontario Genomics; Ontario Genomics Institute","keywords":"Hexachlorocyclohexane; Environmental chemistry; Reductive dechlorination; Lindane; Bioremediation; Benzene; Chemistry; Anaerobic bacteria; Methanogenesis; Contamination; Biodegradation; Bacteria; Biology; Methane; Pesticide; Organic chemistry; Ecology","score_opus":0.009984308464984113,"score_gpt":0.19927090325396438,"score_spread":0.18928659478898027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2973196759","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978767,0.00011777583,0.00012644853,0.00022255497,0.00021055002,0.0010348314,0.00030524327,0.00009105045,0.000014849307],"genre_scores_gemma":[0.99736995,0.00023681228,0.0020804813,0.00016179704,0.000041227413,0.000024371204,0.0000034222624,0.00006783802,0.000014097329],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9978837,0.00015466474,0.00047564885,0.00067934016,0.00035353727,0.00045310665],"domain_scores_gemma":[0.9983213,0.00008572519,0.0005275265,0.00062013307,0.0001929873,0.00025231508],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00053137215,0.00050127663,0.0006138357,0.00022824296,0.00015330792,0.00010983359,0.00036577485,0.0003934491,0.00010835034],"category_scores_gemma":[0.00011775013,0.0004936499,0.000053167292,0.000492482,0.0003244165,0.00022446332,0.0008833858,0.00042266713,0.000015337366],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015558477,0.00012645015,0.03905296,0.00011324673,0.0001243246,0.000004739613,0.00023134322,0.00035655213,0.9596221,0.00003637346,0.00016885747,0.0000074541836],"study_design_scores_gemma":[0.001277026,0.0003329419,0.52429515,0.0003838143,0.00014777994,6.4002236e-8,0.00017051912,0.00030076978,0.47181022,0.0000018648396,0.00036503767,0.0009147936],"about_ca_topic_score_codex":0.0006513319,"about_ca_topic_score_gemma":0.00021991832,"teacher_disagreement_score":0.4878119,"about_ca_system_score_codex":0.00048802502,"about_ca_system_score_gemma":0.000118730364,"threshold_uncertainty_score":0.9997515},"labels":[],"label_agreement":null},{"id":"W2973936246","doi":"10.1128/aem.01786-19","title":"Four Aromatic Intradiol Ring Cleavage Dioxygenases from Aspergillus niger","year":2019,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Concordia University; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Enzyme; Aspergillus niger; Biochemistry; Catechol; Dioxygenase; Enzyme kinetics; Aspergillus nidulans; Catabolism; Stereochemistry; Cleavage (geology); Biology; Chemistry; Oxygenase; Gene; Active site","score_opus":0.004458323775550704,"score_gpt":0.15355155957727804,"score_spread":0.14909323580172734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2973936246","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99459565,0.00006531855,0.000014305705,0.00006036466,0.000169113,0.00030227055,0.00013859024,0.00003481117,0.004619574],"genre_scores_gemma":[0.99782676,0.00011056298,0.00042675735,0.000991001,0.000044117143,0.000005745666,0.00022261888,0.00001923676,0.0003532258],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988245,0.00003545346,0.00024126715,0.00049962744,0.000063995525,0.0003351741],"domain_scores_gemma":[0.9995334,0.000048579765,0.00008612677,0.00022597465,2.3581023e-7,0.00010568112],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000079497586,0.00022574929,0.0002443255,0.00002219649,0.00008490662,0.000018663439,0.00017071566,0.00015281248,0.0069640125],"category_scores_gemma":[0.0000023179089,0.00019340304,0.000045676734,0.00004441411,0.00025683094,0.000067622095,0.0002455142,0.00013207913,0.0055295406],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019018884,0.000046042227,0.04225058,0.000002838026,0.00001963244,0.0000034945547,0.00015963078,0.000011008954,0.95396775,0.000008095481,0.0006790356,0.0028328723],"study_design_scores_gemma":[0.0021304886,0.00016637388,0.42415914,0.000016258842,0.000043926946,0.000072309944,0.00067347795,0.00009669612,0.53528434,0.00034327633,0.036071338,0.0009423789],"about_ca_topic_score_codex":0.00007460598,"about_ca_topic_score_gemma":0.000027172626,"teacher_disagreement_score":0.4186834,"about_ca_system_score_codex":0.0001058843,"about_ca_system_score_gemma":0.0000025323304,"threshold_uncertainty_score":0.99524474},"labels":[],"label_agreement":null},{"id":"W2977260890","doi":"10.1007/978-3-319-33598-8_19-1","title":"Signature Metabolite Analysis to Determine In Situ Anaerobic Hydrocarbon Biodegradation","year":2017,"lang":"en","type":"book-chapter","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Bioremediation; Biodegradation; Hydrocarbon; Environmental chemistry; Anoxic waters; Environmental remediation; Anaerobic exercise; Environmental science; Chemistry; Contamination; Biology; Ecology; Organic chemistry; Physiology","score_opus":0.01428410061965743,"score_gpt":0.2240436232473722,"score_spread":0.20975952262771477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2977260890","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.029198527,0.0001308089,0.000096894924,0.00051804364,0.00023259713,0.00061899744,0.000116633375,0.00006381473,0.9690237],"genre_scores_gemma":[0.50448656,0.00015496425,0.0010807207,0.00077729265,0.000056491626,0.0000028992954,0.00036125846,0.000025276539,0.49305454],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.998383,0.000017190898,0.00036633105,0.0006209821,0.0003603636,0.00025216953],"domain_scores_gemma":[0.99897045,0.000015317288,0.0002484263,0.0005916791,0.000010690042,0.00016343007],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00021047099,0.000332514,0.00046980614,0.0003535988,0.000065831744,0.00006994202,0.00042074855,0.00039261862,0.00626134],"category_scores_gemma":[0.00002294549,0.00027817907,0.00020385762,0.00014080961,0.00007314932,0.00014140565,0.00020006133,0.00023244547,0.0015182961],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000085994594,0.00009476252,0.0060214913,0.000016551772,0.0005800114,0.00007948277,0.0003186662,0.00029689458,0.9177799,0.0011426794,0.008719152,0.0648644],"study_design_scores_gemma":[0.0012318913,0.00020017674,0.11673697,0.00009290866,0.0020254545,0.0000051444613,0.000013011261,0.001097149,0.08713208,0.0015211394,0.78676665,0.0031774214],"about_ca_topic_score_codex":0.00038547322,"about_ca_topic_score_gemma":0.019628234,"teacher_disagreement_score":0.8306478,"about_ca_system_score_codex":0.00018727065,"about_ca_system_score_gemma":0.000012329108,"threshold_uncertainty_score":0.99996704},"labels":[],"label_agreement":null},{"id":"W2979621988","doi":"10.1016/j.watres.2019.115167","title":"Tracking functional bacterial biomarkers in response to a gradient of contaminant exposure within a river continuum","year":2019,"lang":"en","type":"article","venue":"Water Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Windsor; Environment and Climate Change Canada","funders":"Natural Sciences and Engineering Research Council of Canada; Environment and Climate Change Canada; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada","keywords":"Environmental chemistry; Mesocosm; Aquatic ecosystem; Ecosystem; Sediment; Chemistry; Environmental science; Ecology; Biology","score_opus":0.033458580004135215,"score_gpt":0.27485742143678965,"score_spread":0.24139884143265444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2979621988","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99845356,0.0000025011373,0.0000034580196,0.0004466327,0.00025646208,0.0004956311,0.000015588108,0.000006331674,0.00031983922],"genre_scores_gemma":[0.998228,0.000001073558,0.00010333444,0.00004197498,0.00001704523,0.000007783013,0.000010843573,0.000007692418,0.001582235],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981706,0.00038612896,0.00026175645,0.0002896043,0.00051632844,0.00037558522],"domain_scores_gemma":[0.9996178,0.000040910265,0.000028386161,0.00017966896,0.000032201333,0.00010102315],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.002776229,0.00008295917,0.00013274209,0.00015780354,0.00003966164,0.000026190859,0.00017361951,0.0000656858,0.004653281],"category_scores_gemma":[0.0000879951,0.000056492416,0.00003384922,0.00026924664,0.00016237028,0.00010498561,0.00020386007,0.00013375253,0.0016868148],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028899547,0.0000676613,0.113378584,0.0000062939775,0.00000675536,0.000009322304,0.0032531351,0.000007925261,0.87915754,0.0000023327716,0.00088957563,0.0003309448],"study_design_scores_gemma":[0.0009808524,0.00029770494,0.5367039,0.00002803241,9.889704e-7,0.0000025153872,0.00020479666,0.000018227049,0.45517096,0.000013236361,0.006493359,0.00008543248],"about_ca_topic_score_codex":0.00047731318,"about_ca_topic_score_gemma":0.0007998489,"teacher_disagreement_score":0.42398655,"about_ca_system_score_codex":0.00018153094,"about_ca_system_score_gemma":0.000021705522,"threshold_uncertainty_score":0.9990905},"labels":[],"label_agreement":null},{"id":"W2982564358","doi":"10.1007/978-981-13-7904-8_5","title":"Microbial Degradation of Polyaromatic Hydrocarbons","year":2019,"lang":"en","type":"book-chapter","venue":"Microorganisms for sustainability","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Biodegradation; Environmental chemistry; Microbial biodegradation; Chemistry; Degradation (telecommunications); Microorganism; Anaerobic bacteria; Gasoline; Environmental science; Bacteria; Organic chemistry; Biology","score_opus":0.00686707474915904,"score_gpt":0.20765525903307136,"score_spread":0.20078818428391232,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2982564358","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6833298,0.00028467673,0.0038042462,0.002616311,0.002102279,0.015633415,0.0024715099,0.0003792236,0.28937852],"genre_scores_gemma":[0.42389858,0.000019128123,0.0019851588,0.0002317904,0.00007005723,0.000008650729,0.0004936305,0.00012470725,0.5731683],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99799657,0.000027930027,0.0006969733,0.00064033037,0.00026405815,0.00037415017],"domain_scores_gemma":[0.9985636,0.00009169974,0.00052678277,0.00064337306,0.00007480382,0.00009972357],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00038668353,0.00040830826,0.0005506828,0.00007798209,0.00009051414,0.000025500623,0.00041788616,0.0003963297,0.0031091426],"category_scores_gemma":[0.0001274746,0.00039860932,0.00030893952,0.00007024837,0.0003828092,0.000097033044,0.00024607344,0.00019720779,0.0003477268],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016224674,0.00019633613,0.0020294676,0.00081370806,0.00009415364,0.0000035478984,0.00036715838,0.000009693297,0.9736816,0.006557128,0.012563674,0.0035212855],"study_design_scores_gemma":[0.0027726016,0.00089986116,0.0022866225,0.00016340373,0.0005381273,0.000031364587,0.000273512,0.000089044996,0.5918413,0.105412945,0.29329905,0.0023921768],"about_ca_topic_score_codex":0.00011559771,"about_ca_topic_score_gemma":0.00014751709,"teacher_disagreement_score":0.38184032,"about_ca_system_score_codex":0.0011214026,"about_ca_system_score_gemma":0.0002659869,"threshold_uncertainty_score":0.9998466},"labels":[],"label_agreement":null},{"id":"W2988369871","doi":"10.3390/microorganisms7110523","title":"Aided Phytoremediation to Clean Up Dioxins/Furans-Aged Contaminated Soil: Correlation between Microbial Communities and Pollutant Dissipation","year":2019,"lang":"en","type":"article","venue":"Microorganisms","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Institut National de la Recherche Agronomique; Université du Littoral Côte d'Opale","keywords":"Phytoremediation; Pollutant; Environmental chemistry; Soil contamination; Microcosm; Bioremediation; Soil water; Soil Pollutants; Environmental science; Chemistry; Microorganism; Contamination; Biology; Bacteria; Ecology","score_opus":0.007757201535395631,"score_gpt":0.2022692995869168,"score_spread":0.19451209805152117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2988369871","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970388,0.000008338941,0.0008464596,0.0004358288,0.0005147155,0.00067123247,0.00014457549,0.000105687664,0.00023438786],"genre_scores_gemma":[0.9977032,0.000015083315,0.00031631475,0.0006092732,0.00006941768,0.0000031745856,0.00034254263,0.00003264181,0.000908371],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986126,0.00014274848,0.00038034088,0.0003062328,0.00024329874,0.00031479492],"domain_scores_gemma":[0.9993244,0.00006810251,0.00016792958,0.00026131692,0.00002335132,0.00015492659],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00030894534,0.00023370044,0.00025070188,0.00008197075,0.00020838529,0.00009060343,0.00017973802,0.00016706719,0.0016891056],"category_scores_gemma":[0.000028079647,0.00022636824,0.00004363534,0.00029491112,0.00011412606,0.00029710965,0.0001558117,0.00018497791,0.0014938848],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041962252,0.000023756249,0.17263211,0.000007802758,0.000009816149,5.8393846e-7,0.003806271,0.000019258661,0.81975234,0.0000057165566,0.00091050816,0.0027899013],"study_design_scores_gemma":[0.000925364,0.000113544054,0.57967985,0.000022769414,0.00002122346,0.0000037289583,0.0007566421,0.000069967384,0.41721526,0.000025627043,0.0008955399,0.00027049624],"about_ca_topic_score_codex":0.0006106743,"about_ca_topic_score_gemma":0.0015850073,"teacher_disagreement_score":0.40704772,"about_ca_system_score_codex":0.00022699244,"about_ca_system_score_gemma":0.000016820424,"threshold_uncertainty_score":0.99928355},"labels":[],"label_agreement":null},{"id":"W2989937117","doi":"10.1016/j.marpolbul.2019.110713","title":"Biological response to dissolved versus dispersed oil","year":2019,"lang":"en","type":"article","venue":"Marine Pollution Bulletin","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Gulf of Mexico Research Initiative","keywords":"Mesocosm; Environmental chemistry; Chemistry; Seawater; Fraction (chemistry); Produced water; Toxicity; Corn oil; Nutrient; Chromatography; Organic chemistry; Food science; Biology; Environmental science; Environmental engineering; Ecology","score_opus":0.01094609517655566,"score_gpt":0.21667170216057624,"score_spread":0.2057256069840206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2989937117","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96251833,0.0000015426459,0.000010585966,0.015618847,0.00049419596,0.00011626934,0.000018424078,0.000064023676,0.021157749],"genre_scores_gemma":[0.9804632,0.000007819368,0.00062838575,0.001519525,0.000036150297,0.00000394521,0.00001965149,0.0000072897997,0.017314032],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989786,0.00011383202,0.0001633376,0.00030523582,0.00018084708,0.0002581598],"domain_scores_gemma":[0.9995447,0.00005155945,0.000042722237,0.00020901694,0.0000058048263,0.00014621935],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00034447605,0.00012067405,0.00011225207,0.000029414005,0.00005848954,0.000021305526,0.00016887634,0.00007637492,0.087352626],"category_scores_gemma":[0.00019796685,0.00009595672,0.000053205727,0.00018777396,0.00006107102,0.000021068252,0.00033449716,0.00007683604,0.047543097],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006950459,0.000136359,0.043856867,0.0000028860015,0.000009147809,0.0000060814273,0.00012781742,0.00007346663,0.89109725,0.00007363486,0.0436171,0.014048916],"study_design_scores_gemma":[0.0010379049,0.00019725128,0.29823834,0.0000028498966,0.0000024870305,0.0000010720314,0.00003812417,0.000024001616,0.0034201846,0.000003594796,0.6968678,0.0001663858],"about_ca_topic_score_codex":0.00016471076,"about_ca_topic_score_gemma":0.00005547575,"teacher_disagreement_score":0.8876771,"about_ca_system_score_codex":0.00016556753,"about_ca_system_score_gemma":0.0000063352945,"threshold_uncertainty_score":0.9531985},"labels":[],"label_agreement":null},{"id":"W2992628624","doi":"10.1038/s41396-019-0561-2","title":"Novel copper-containing membrane monooxygenases (CuMMOs) encoded by alkane-utilizing <i>Betaproteobacteria</i>","year":2019,"lang":"en","type":"article","venue":"The ISME Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Office of Science; Genome Alberta; National Research Foundation; Genome British Columbia; Syncrude; U.S. Department of Energy; Government of Alberta; Genome Canada; Joint Genome Institute; Mitacs; National Research Foundation of Korea","keywords":"Biology; Betaproteobacteria; Methane monooxygenase; Gene; Monooxygenase; Ammonia monooxygenase; Bacteria; Methanotroph; Operon; Gene cluster; Anaerobic oxidation of methane; Alkane; Microbiology; Biochemistry; Genetics; Archaea; Escherichia coli; Enzyme; Cytochrome P450","score_opus":0.010480857030037552,"score_gpt":0.2070314086211625,"score_spread":0.19655055159112494,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2992628624","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921198,0.00005497657,0.0001000572,0.0015478095,0.00048898655,0.0002475974,0.000030345087,0.000030755687,0.005379668],"genre_scores_gemma":[0.9962359,0.00009687983,0.00053234247,0.0017130855,0.00012147024,0.0000015784263,0.000008147735,0.00001871531,0.0012718913],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985165,0.00008771928,0.00035957905,0.00022466709,0.00040644896,0.00040507142],"domain_scores_gemma":[0.9992655,0.000059201837,0.00025950887,0.00024099417,0.000014239903,0.00016056125],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00072642637,0.00019005117,0.00020160503,0.000022442075,0.00028309115,0.0001512773,0.0004922221,0.00008171651,0.0064097885],"category_scores_gemma":[0.000034965284,0.0001207871,0.00009761111,0.00015080773,0.00009917464,0.00031904943,0.00014379858,0.0003538878,0.0015838743],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004978416,0.000041665615,0.0047114124,0.0000024920346,0.000015603531,0.0000020666464,0.00034008845,0.00007988532,0.9850752,0.00000495147,0.008521723,0.001155149],"study_design_scores_gemma":[0.0021877994,0.0002585837,0.009579005,0.000067969544,0.0000440167,0.00054115086,0.001004734,0.00076315063,0.9115088,0.00005587427,0.07342277,0.0005661715],"about_ca_topic_score_codex":0.000134108,"about_ca_topic_score_gemma":0.000045703262,"teacher_disagreement_score":0.0735664,"about_ca_system_score_codex":0.00013438052,"about_ca_system_score_gemma":0.000026676673,"threshold_uncertainty_score":0.9991935},"labels":[],"label_agreement":null},{"id":"W2995806735","doi":"10.22036/pcr.2019.204077.1682","title":"Optimization of Biodegradation of Long Chain n-Alkanes by Rhodococcus sp. Moj-3449 Using Response Surface Methodology","year":2020,"lang":"en","type":"article","venue":"Physical chemistry research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biodegradation; Salinity; Bioremediation; Strain (injury); Rhodococcus; Response surface methodology; Environmental pollution; Environmental chemistry; Chemistry; Environmental science; Contamination; Chromatography; Organic chemistry; Biology; Enzyme; Ecology","score_opus":0.16115799156184746,"score_gpt":0.38125615817874714,"score_spread":0.22009816661689968,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2995806735","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99714714,0.000019534462,0.001687115,0.0007380585,0.000008375785,0.00014691589,0.000060723876,0.000013003421,0.00017915608],"genre_scores_gemma":[0.99691296,0.000013976072,0.002866391,0.00002040877,0.000033271663,0.0000010767088,0.000041554038,0.000010179863,0.000100168516],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981736,0.0005176071,0.00024228102,0.00030622745,0.0005155717,0.0002447112],"domain_scores_gemma":[0.9990565,0.00044652796,0.00012522224,0.00017310765,0.00006626227,0.00013234472],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010326785,0.00010274842,0.00021714506,0.00001253004,0.0000549991,0.000010877921,0.00025723162,0.000088171284,0.0007542207],"category_scores_gemma":[0.000795092,0.00009464864,0.000053980286,0.0006135087,0.0004090273,0.000084975916,0.00019710572,0.00019284271,0.000023501105],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043361928,0.000108495966,0.0021904667,0.00005931864,0.000007315736,0.0000012325016,0.00029071,0.011208503,0.9849881,9.926058e-7,0.00040910728,0.0003021588],"study_design_scores_gemma":[0.00021490359,0.000058384856,0.0005566934,0.000008936726,0.000005130962,7.34455e-7,0.00009473154,0.054428414,0.94447577,0.00001145599,0.0000618333,0.000083011975],"about_ca_topic_score_codex":0.00012491917,"about_ca_topic_score_gemma":0.0000010127169,"teacher_disagreement_score":0.04321991,"about_ca_system_score_codex":0.00008064681,"about_ca_system_score_gemma":0.0000373358,"threshold_uncertainty_score":0.8258188},"labels":[],"label_agreement":null},{"id":"W2996685179","doi":"10.1021/acs.est.9b05558","title":"Microbial Communities Associated with Sustained Anaerobic Reductive Dechlorination of α-, β-, γ-, and δ-Hexachlorocyclohexane Isomers to Monochlorobenzene and Benzene","year":2019,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Ontario; Ministry of Science and Technology of the People's Republic of China; China Scholarship Council; Genome Canada; Ontario Genomics; Ontario Research Foundation","keywords":"Hexachlorocyclohexane; Bioremediation; Reductive dechlorination; Environmental chemistry; Benzene; Chemistry; Euryarchaeota; Anaerobic bacteria; Microbial consortium; Methanogenesis; Microbial biodegradation; Biodegradation; Contamination; Microorganism; Bacteria; Methane; Pesticide; Organic chemistry; Biology; 16S ribosomal RNA; Ecology; Biochemistry","score_opus":0.004637291358846558,"score_gpt":0.19394206331846034,"score_spread":0.1893047719596138,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2996685179","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985582,0.000027313545,0.000023540731,0.0004881097,0.000045235913,0.00048076655,0.00002398639,0.000043225555,0.00030957433],"genre_scores_gemma":[0.99871504,0.00006319962,0.0009220086,0.000110011446,0.0000038328244,0.0000066508446,0.000011705454,0.00001198293,0.00015557962],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986258,0.00002890931,0.00022284007,0.00042461872,0.00030611514,0.00039168212],"domain_scores_gemma":[0.9994074,0.000029310644,0.00015809483,0.0002733638,0.000009374573,0.00012243853],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033118503,0.00019113765,0.00022964615,0.0003182344,0.00020842093,0.000024388028,0.0003519212,0.0001227979,0.0004113521],"category_scores_gemma":[0.000030725685,0.00016912725,0.000016036816,0.0008974669,0.0020512007,0.00034334173,0.00061800017,0.00014867846,0.000037571896],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000421203,0.000074885225,0.1279203,0.000002511522,0.0000076967535,0.0000010639059,0.00074651674,0.00008509071,0.8683204,0.0000792617,0.000013306143,0.0027068385],"study_design_scores_gemma":[0.0010608241,0.0010322714,0.41264433,0.00003243019,0.000020722706,0.000029286042,0.008292335,0.00020856208,0.5756576,0.00013291743,0.0004921687,0.0003965315],"about_ca_topic_score_codex":0.00015304415,"about_ca_topic_score_gemma":0.00023688326,"teacher_disagreement_score":0.29266277,"about_ca_system_score_codex":0.00042144858,"about_ca_system_score_gemma":0.000017099497,"threshold_uncertainty_score":0.7557734},"labels":[],"label_agreement":null},{"id":"W2997031930","doi":"10.1080/15226514.2019.1707480","title":"Hydrocarbon-degrading genes in root endophytic communities on oil sands reclamation covers","year":2020,"lang":"en","type":"article","venue":"International Journal of Phytoremediation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"AlkB; Hydrocarbon; Biology; Land reclamation; Botany; Environmental chemistry; Chemistry; Ecology; Gene; Organic chemistry","score_opus":0.018593961154499367,"score_gpt":0.23545964903795388,"score_spread":0.2168656878834545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2997031930","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933974,0.000029710971,0.00011584163,0.0025802453,0.0009785458,0.00004194228,0.00000970164,0.000011335335,0.0028352707],"genre_scores_gemma":[0.9981532,0.00019307947,0.00018213448,0.00092140026,0.0004970135,0.0000011930453,0.000025041105,0.000009060766,0.000017874636],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985615,0.00007184224,0.00046857196,0.00009709321,0.0006834586,0.000117544376],"domain_scores_gemma":[0.9992765,0.00008426388,0.00043468317,0.000061686274,0.00005756637,0.00008525489],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028443197,0.00011119545,0.0001439472,0.0001242379,0.00003181902,0.000045973444,0.0003312094,0.000056932015,0.0005257479],"category_scores_gemma":[0.00013334828,0.00010145285,0.00007238933,0.00018179412,0.000046184126,0.0003909284,0.000045347435,0.00019615192,0.000098477925],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006646198,0.00023379132,0.5447703,0.00001399568,0.00007614397,0.000045907185,0.00598635,0.014553022,0.37602687,0.00013529901,0.002894225,0.05459945],"study_design_scores_gemma":[0.0077323383,0.0010238297,0.6658158,0.00036314974,0.000053421238,0.000056469467,0.0018268338,0.028381785,0.27361825,0.00084601616,0.019451259,0.0008308934],"about_ca_topic_score_codex":0.00007208161,"about_ca_topic_score_gemma":0.00020443855,"teacher_disagreement_score":0.121045426,"about_ca_system_score_codex":0.00037486738,"about_ca_system_score_gemma":0.00002828318,"threshold_uncertainty_score":0.57565707},"labels":[],"label_agreement":null},{"id":"W2997609492","doi":"10.1155/2019/8124716","title":"Biodegradation Kinetics of Benzene and Naphthalene in the Vadose and Saturated Zones of a (Semi)-arid Saline Coastal Soil Environment","year":2019,"lang":"en","type":"article","venue":"Geofluids","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Qatar National Research Fund; University of Waterloo; Qatar University; Fonds National de la Recherche Luxembourg; Qatar Foundation","keywords":"Biodegradation; Microcosm; Environmental chemistry; Sorption; Nitrate; Soil water; Environmental remediation; Naphthalene; Sulfate; Vadose zone; Environmental science; Groundwater; Salinity; Water table; Chemistry; Benzene; Anoxic waters; Environmental engineering; Ecology; Contamination; Soil science; Geology; Adsorption; Geotechnical engineering; Organic chemistry; Biology","score_opus":0.005309980331227775,"score_gpt":0.1829866480635567,"score_spread":0.1776766677323289,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2997609492","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99917734,0.00015619861,0.000023151135,0.00023706885,0.000029535626,0.00017127684,0.000058069043,0.0000030167018,0.00014436014],"genre_scores_gemma":[0.999123,0.000480352,0.00022069884,0.000063726715,0.0000057646153,6.530656e-7,0.000034870864,0.0000038015942,0.00006714675],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99930924,0.000043504595,0.00021437167,0.00015002952,0.00017362619,0.00010922688],"domain_scores_gemma":[0.9997312,0.00003137545,0.000076415185,0.00013074791,0.0000042643046,0.000026026559],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019315243,0.00008379671,0.000118028445,0.000026310787,0.000013315675,0.000006827568,0.000078289755,0.000053253894,0.000335532],"category_scores_gemma":[0.000010685474,0.00005807784,0.000014709963,0.00010750524,0.00013829084,0.000052928863,0.00009265538,0.000047014026,0.000015657162],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026240737,0.00007495955,0.08951629,0.000013543582,0.000003202232,5.3510416e-7,0.00038227052,0.000028161021,0.90807813,0.000011150487,0.00008748928,0.001778018],"study_design_scores_gemma":[0.0006251586,0.00020433453,0.5763018,0.000015597461,0.000009926378,0.00000661776,0.00025658886,0.00034242094,0.4214732,0.00003233074,0.00063752575,0.00009450887],"about_ca_topic_score_codex":0.0003306434,"about_ca_topic_score_gemma":0.00014074409,"teacher_disagreement_score":0.4867855,"about_ca_system_score_codex":0.0000124547705,"about_ca_system_score_gemma":0.0000028255881,"threshold_uncertainty_score":0.36738402},"labels":[],"label_agreement":null},{"id":"W3000170735","doi":"10.1016/j.jenvman.2019.110013","title":"Effect of competition between petroleum-degrading bacteria and indigenous compost microorganisms on the efficiency of petroleum sludge bioremediation: Field application of mineral-based culture in the composting process","year":2020,"lang":"en","type":"article","venue":"Journal of Environmental Management","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":71,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Arak University of Medical Sciences","keywords":"Compost; Biodegradation; Bioremediation; Protein Data Bank (RCSB PDB); Microorganism; Petroleum; Food science; Pulp and paper industry; Chemistry; Environmental science; Bacteria; Biology; Ecology; Biochemistry; Organic chemistry","score_opus":0.00527614807578396,"score_gpt":0.20595511187452448,"score_spread":0.2006789637987405,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3000170735","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99836046,0.000030240784,0.00032616837,0.0007110151,0.000024842282,0.00040078946,0.000027501508,0.0000020277282,0.00011695192],"genre_scores_gemma":[0.9994641,0.000037875143,0.00019325275,0.00025184843,0.000026401518,0.0000024850042,0.000016642638,0.000005936119,0.0000014776994],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99868923,0.00015342575,0.00050092,0.00013266478,0.00041372873,0.00011005404],"domain_scores_gemma":[0.9990083,0.00016117988,0.0006835232,0.00010451265,0.0000042582633,0.000038256785],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005694385,0.00012686466,0.00023017266,0.000050551476,0.000055715023,0.000010915606,0.00029561017,0.00004039306,0.00006973907],"category_scores_gemma":[0.000015474236,0.00007562624,0.00006175489,0.00015354998,0.00012848922,0.00006038005,0.000059820224,0.00013949152,0.0000040652117],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015669593,0.00018045443,0.1889732,0.0001348638,0.00002134894,0.0000024112142,0.001338611,0.0005709231,0.8068305,0.000008200798,0.000031364852,0.001751393],"study_design_scores_gemma":[0.0014251375,0.002315427,0.38051686,0.00013305161,0.000094827315,0.000003853583,0.000992329,0.00068905106,0.6135765,0.00000995898,0.00011655911,0.00012650459],"about_ca_topic_score_codex":0.000008891149,"about_ca_topic_score_gemma":0.0000022974482,"teacher_disagreement_score":0.19325408,"about_ca_system_score_codex":0.00006196988,"about_ca_system_score_gemma":0.0000030546437,"threshold_uncertainty_score":0.30839485},"labels":[],"label_agreement":null},{"id":"W3001790732","doi":"10.11575/prism/37500","title":"Biostimulation for Enhanced Bioremediation of Crude Oil and Diesel Fuel by Marine Sediment Communities of Canada’s Subarctic: A Microcosm-Simulated Oil Spill Study","year":2020,"lang":"en","type":"dissertation","venue":"PRISM (University of Calgary)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Biostimulation; Subarctic climate; Microcosm; Bioremediation; Environmental science; Diesel fuel; Oil spill; Sediment; Fuel oil; Environmental engineering; Ecology; Oceanography; Waste management; Engineering; Geology; Contamination; Biology","score_opus":0.006997437776504233,"score_gpt":0.19201310742648636,"score_spread":0.18501566964998212,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3001790732","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977014,0.000050779323,0.00024403274,0.00015298855,0.00009812038,0.00027324024,0.000045818597,0.0000115210905,0.0014220751],"genre_scores_gemma":[0.99432844,0.00035395875,0.001874217,0.000026312553,0.0000039445927,6.1128185e-7,0.0014594912,0.000013712729,0.0019393062],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988698,0.000066133056,0.00031993067,0.00022436399,0.0003655342,0.00015426958],"domain_scores_gemma":[0.99896264,0.00008679429,0.00060678466,0.00016089434,0.000093151975,0.000089731366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013604619,0.0001936538,0.00039993844,0.00007741742,0.000106503765,0.000005208178,0.00023193775,0.00014962128,0.00027908524],"category_scores_gemma":[0.000033317283,0.00022406397,0.000064075095,0.0001542145,0.00011852322,0.00008624326,0.00012972351,0.000116426556,0.0000013619568],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013462589,0.0004670107,0.013321657,0.00102071,0.00021795703,0.0000021044905,0.018743824,0.000020669551,0.9040971,0.0000054112106,0.001664431,0.059092905],"study_design_scores_gemma":[0.014871463,0.0024161784,0.47363457,0.00044606204,0.0013329647,8.193132e-7,0.023347177,0.030306421,0.44174066,0.0001072147,0.009947584,0.0018488808],"about_ca_topic_score_codex":0.22645235,"about_ca_topic_score_gemma":0.24202411,"teacher_disagreement_score":0.4623564,"about_ca_system_score_codex":0.00017023348,"about_ca_system_score_gemma":0.00012665793,"threshold_uncertainty_score":0.91370636},"labels":[],"label_agreement":null},{"id":"W3002717528","doi":"10.1007/s11356-020-07696-6","title":"Effects of dissolved organic phase composition and salinity on the engineered sulfate application in a flow-through system","year":2020,"lang":"en","type":"article","venue":"Environmental Science and Pollution Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Qatar National Library; Qatar National Research Fund; Qatar University; Fonds National de la Recherche Luxembourg; Qatar Foundation","keywords":"Naphthalene; Toluene; Chemistry; Benzene; Salinity; Biodegradation; Environmental chemistry; Hydrocarbon; Dissolved organic carbon; Sulfate; Microbial biodegradation; Organic chemistry; Microorganism; Geology","score_opus":0.019550213399033515,"score_gpt":0.2738569615601696,"score_spread":0.2543067481611361,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3002717528","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972159,0.00002875852,0.00019730855,0.0018382544,0.000016334365,0.00053416577,0.000022082799,0.000008837948,0.00013833171],"genre_scores_gemma":[0.99961025,0.00008844985,0.000068187146,0.00019577121,0.000012552036,0.000010665774,0.0000054829866,0.000003547146,0.0000051051748],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986348,0.00013773881,0.00014889278,0.0002819374,0.0005843659,0.00021222433],"domain_scores_gemma":[0.9996732,0.00007445886,0.000040878083,0.000096641226,0.0000039021834,0.000110929424],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00088805694,0.00007499234,0.00008389741,0.000034989585,0.000243237,0.000026523281,0.00015637782,0.000037240945,0.00009195517],"category_scores_gemma":[0.000063601066,0.00005367717,0.000010885942,0.0005557647,0.0009280409,0.00016061359,0.00016193095,0.00014152643,0.00008557724],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048861697,0.00008837054,0.0013029329,0.000015617252,0.0000010347458,9.602719e-7,0.00074161123,0.000025531635,0.9958382,0.00010205305,0.000058583184,0.001776194],"study_design_scores_gemma":[0.0011175602,0.00031443938,0.15207268,0.000030003903,0.000004450645,0.0000024063718,0.0006993037,0.016833954,0.8283386,0.000024590607,0.00043936956,0.0001226285],"about_ca_topic_score_codex":0.00008122425,"about_ca_topic_score_gemma":0.000008463567,"teacher_disagreement_score":0.16749963,"about_ca_system_score_codex":0.00021703003,"about_ca_system_score_gemma":0.0000113567,"threshold_uncertainty_score":0.34194052},"labels":[],"label_agreement":null},{"id":"W3007282137","doi":"","title":"Advancement of biosurfactant production and biosurfactant-aided pollution remediation","year":2018,"lang":"en","type":"dissertation","venue":"Memorial University Research Repository (Memorial University)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Memorial University of Newfoundland","keywords":"Surfactin; Environmental remediation; Bioremediation; Environmentally friendly; Waste management; Biodegradation; Lipopeptide; Environmental pollution; Environmental science; Petroleum; Contamination; Chemistry; Pulp and paper industry; Engineering; Bacteria","score_opus":0.018139007813441313,"score_gpt":0.24499103908142816,"score_spread":0.22685203126798686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3007282137","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96745616,0.000033299788,0.000018895307,0.00019834224,0.010117869,0.0011907668,0.00010916339,0.000092790586,0.020782726],"genre_scores_gemma":[0.9262527,0.0013964112,0.00054416776,0.000006368278,0.002031314,4.1533383e-7,0.00039981934,0.000047355214,0.06932145],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9952204,0.0008144142,0.0004950931,0.001209154,0.0015928637,0.0006680729],"domain_scores_gemma":[0.9977333,0.000094005496,0.0006950924,0.0005915162,0.00052292354,0.00036319398],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011458987,0.00044186268,0.00056523265,0.0008379341,0.0010453376,0.000072487586,0.00075199327,0.0006984527,0.0005243829],"category_scores_gemma":[0.00040605347,0.0005079848,0.00019117787,0.0018581321,0.000878171,0.0008744976,0.0004107646,0.00060986937,0.00013214693],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006170717,0.0003192485,0.0016013805,0.00018136017,0.00014627965,0.00014204053,0.001438733,0.000028658593,0.97783273,0.00028049544,0.00950969,0.0023486412],"study_design_scores_gemma":[0.00344329,0.0014540871,0.012607195,0.00041762018,0.00038342742,0.000017220234,0.007980926,0.00009196936,0.6620951,0.000086168155,0.31017324,0.0012497487],"about_ca_topic_score_codex":0.0019620915,"about_ca_topic_score_gemma":0.0026428876,"teacher_disagreement_score":0.31573766,"about_ca_system_score_codex":0.0018317816,"about_ca_system_score_gemma":0.00045097695,"threshold_uncertainty_score":0.9997372},"labels":[],"label_agreement":null},{"id":"W3007616775","doi":"10.3389/fmicb.2020.00064","title":"Isolation and Characterization of Biosurfactant-Producing Bacteria From Oil Well Batteries With Antimicrobial Activities Against Food-Borne and Plant Pathogens","year":2020,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":117,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University; McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Antimicrobial; Salmonella enterica; Actinobacteria; Microbiology; Firmicutes; Bacteria; Bacillus (shape); Proteobacteria; Food science; 16S ribosomal RNA; Salmonella","score_opus":0.006092214295337776,"score_gpt":0.16014428476344097,"score_spread":0.1540520704681032,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3007616775","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99701196,0.000033433236,0.00038335074,0.00085738266,0.0002473508,0.00012054407,0.0012974109,0.000019094332,0.00002949351],"genre_scores_gemma":[0.9924275,0.00038216723,0.0055561634,0.00082926103,0.00003434325,0.0000014191528,0.00074153696,0.00001440748,0.000013187418],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99892706,0.000092897244,0.0002803575,0.00044799322,0.000040486113,0.00021119842],"domain_scores_gemma":[0.99961084,0.000017673574,0.0001993548,0.00010544012,0.000007092659,0.000059600574],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008451855,0.00018705233,0.00031471642,0.00004999955,0.00005539452,0.000024439383,0.00009201404,0.00013368829,0.00012330755],"category_scores_gemma":[0.000012085806,0.0001629355,0.000018139517,0.00013722059,0.0003446518,0.0001980512,0.000111523485,0.000101727695,0.0000057240686],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020469096,0.000017704635,0.18970223,0.000019683699,0.000017230974,0.0000019461545,0.0013334695,0.0000034079287,0.80715215,3.7296755e-7,0.0004969877,0.0010501328],"study_design_scores_gemma":[0.00093128515,0.00022957486,0.21046302,0.00004724862,0.000020017807,0.000009901613,0.0002970466,0.00015011788,0.7837562,0.000002464678,0.0037750534,0.00031805664],"about_ca_topic_score_codex":0.00003997319,"about_ca_topic_score_gemma":0.000098451266,"teacher_disagreement_score":0.023395924,"about_ca_system_score_codex":0.000038466602,"about_ca_system_score_gemma":0.000012721604,"threshold_uncertainty_score":0.66443163},"labels":[],"label_agreement":null},{"id":"W3007921512","doi":"10.1074/jbc.ra119.011212","title":"Structural analyses of the Group A flavin-dependent monooxygenase PieE reveal a sliding FAD cofactor conformation bridging OUT and IN conformations","year":2020,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Université Laval","funders":"Canadian Institutes of Health Research; Canada Foundation for Innovation; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Cofactor; Bridging (networking); Flavin group; Monooxygenase; Chemistry; Stereochemistry; Flavoprotein; Flavin adenine dinucleotide; Group (periodic table); Biochemistry; Enzyme; Organic chemistry; Computer science","score_opus":0.05324776153043634,"score_gpt":0.27208081744136087,"score_spread":0.21883305591092453,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3007921512","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992036,0.000035621342,0.000046086298,0.00042321783,0.000026953536,0.000058344267,0.000023900542,0.0000032832106,0.00017894649],"genre_scores_gemma":[0.9995653,0.00004473947,0.00011490213,0.00023095998,0.00003106118,2.3318677e-7,0.000004667118,0.0000014256552,0.0000067264746],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99918526,0.000029862,0.00045495873,0.00007172861,0.00016022426,0.000097954224],"domain_scores_gemma":[0.9993982,0.000030016845,0.00042635042,0.00004644648,0.00001635252,0.00008267547],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016696584,0.00007834023,0.00016090288,0.000008826954,0.000040385017,0.0000151466775,0.00015510675,0.00007058416,0.00025191705],"category_scores_gemma":[0.00015377133,0.000043815307,0.000063421925,0.00008967443,0.000079428566,0.00014303181,0.00009211131,0.00017166162,0.0000029849225],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045617802,0.000008172859,0.035165858,0.000015045341,0.0000064177398,0.000001551082,0.00031058455,0.00006903042,0.9638913,6.2235e-7,0.00009346655,0.00039231553],"study_design_scores_gemma":[0.0006013787,0.000058129463,0.1609902,0.00003258173,0.000012574261,0.000032269658,0.00050414325,0.0014166952,0.8361278,0.000016913255,0.00010553333,0.00010175775],"about_ca_topic_score_codex":0.0000107442065,"about_ca_topic_score_gemma":0.000003966865,"teacher_disagreement_score":0.12776348,"about_ca_system_score_codex":0.000054079865,"about_ca_system_score_gemma":0.000010588235,"threshold_uncertainty_score":0.2758315},"labels":[],"label_agreement":null},{"id":"W3012242125","doi":"10.1039/c9em00605b","title":"Insights into origins and function of the unexplored majority of the reductive dehalogenase gene family as a result of genome assembly and ortholog group classification","year":2020,"lang":"en","type":"article","venue":"Environmental Science Processes & Impacts","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Hospital Edmonton; University of Alberta; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Strategic Environmental Research and Development Program; Ontario Genomics Institute; Government of Ontario; Ontario Genomics; Genome Canada; Government of Canada; U.S. Department of Defense","keywords":"Synteny; Dehalogenase; Genome; Biology; Genetics; Dehalococcoides; Gene; Phylogenetics; Chemistry","score_opus":0.016517894672455628,"score_gpt":0.22005813880177377,"score_spread":0.20354024412931815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3012242125","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99883264,0.00021242641,0.000023413411,0.0003366092,0.000054834272,0.00035185434,0.000029822015,0.0000058107025,0.00015256315],"genre_scores_gemma":[0.99929565,0.0003182901,0.00016085296,0.0001954925,0.000011481967,0.0000033371496,0.000004326537,0.0000054300017,0.0000051101],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986007,0.00006273493,0.0002874963,0.00037028844,0.000513471,0.00016528703],"domain_scores_gemma":[0.99923724,0.000026959247,0.00038038022,0.00020393694,0.000012461899,0.00013903412],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022111932,0.00013143475,0.0001439008,0.000026992204,0.00020600339,0.000016818856,0.00034459398,0.000056340694,0.000022929986],"category_scores_gemma":[0.00020249982,0.00007824388,0.000029717157,0.0007518674,0.002213912,0.00045410398,0.00036650102,0.0000917551,0.000005635243],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005916392,0.00008191864,0.037107043,0.000026135227,0.000004230112,1.9313119e-7,0.0028064076,0.00002516781,0.95919937,0.000025450156,0.000004671894,0.00066024344],"study_design_scores_gemma":[0.00015807993,0.00014047943,0.54963285,0.0000079338715,0.000013991733,0.0000016987192,0.0008585428,0.0000428182,0.44892037,0.00009169181,0.000074105745,0.000057450274],"about_ca_topic_score_codex":0.0001610303,"about_ca_topic_score_gemma":0.000058315374,"teacher_disagreement_score":0.5125258,"about_ca_system_score_codex":0.00015037943,"about_ca_system_score_gemma":0.000071839335,"threshold_uncertainty_score":0.81572515},"labels":[],"label_agreement":null},{"id":"W3017229494","doi":"10.1016/j.scitotenv.2020.138723","title":"Microbial eco-physiological strategies for salinity-mediated crude oil biodegradation","year":2020,"lang":"en","type":"article","venue":"The Science of The Total Environment","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":74,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Fisheries and Oceans Canada; Canada Foundation for Innovation","keywords":"Biodegradation; Salinity; Crude oil; Environmental science; Ecology; Petroleum engineering; Biology; Engineering","score_opus":0.024670101938247518,"score_gpt":0.22221068307325273,"score_spread":0.19754058113500522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3017229494","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930006,0.000008397492,0.000066024506,0.005837838,0.0001468088,0.0002449496,0.00007431044,0.000016795297,0.00060422975],"genre_scores_gemma":[0.9988065,0.000024025681,0.0005149483,0.00040514712,0.0000445193,0.000006225953,0.000007905932,0.0000054531893,0.00018528439],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99867713,0.00006338659,0.00024593063,0.0003199668,0.00042222234,0.0002713656],"domain_scores_gemma":[0.9994073,0.000049565853,0.00017702336,0.00026529242,0.0000058988085,0.00009494552],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004529354,0.00013119334,0.00012559601,0.000010571763,0.00032496708,0.00004546211,0.0008048176,0.000046365167,0.0008793689],"category_scores_gemma":[0.0001161816,0.000068103065,0.00009657884,0.0002637371,0.0019991815,0.00021214756,0.00045160812,0.00010250007,0.0003351579],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029077379,0.0000467448,0.000027108403,0.0000037231164,0.0000033809854,6.9960365e-8,0.0003259511,0.0050867344,0.99291116,0.000065076376,0.0009942835,0.00050667947],"study_design_scores_gemma":[0.0008550989,0.00038252198,0.04399327,0.00001261042,0.000042950247,0.000003914373,0.00075518206,0.008854583,0.9413547,0.000628326,0.0027290122,0.0003878614],"about_ca_topic_score_codex":0.0000351257,"about_ca_topic_score_gemma":0.0000021704575,"teacher_disagreement_score":0.051556498,"about_ca_system_score_codex":0.00009767473,"about_ca_system_score_gemma":0.000037682526,"threshold_uncertainty_score":0.9628473},"labels":[],"label_agreement":null},{"id":"W3022871673","doi":"10.1016/j.tibtech.2020.04.007","title":"Engineering Microbes for Remediation of Oil Sands Tailings","year":2020,"lang":"en","type":"review","venue":"Trends in biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Tailings; Bioremediation; Environmental remediation; Synthetic biology; Software deployment; Oil sands; Biochemical engineering; Key (lock); Environmental science; Biotechnology; Biology; Engineering; Ecology; Chemistry; Computational biology","score_opus":0.023141324071930543,"score_gpt":0.2786926836833982,"score_spread":0.2555513596114677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3022871673","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00037766754,0.9973428,0.00010218083,0.0007145862,0.0004206148,0.0002464432,0.00019315894,0.00016781979,0.0004347283],"genre_scores_gemma":[0.00026358414,0.996222,0.003028105,0.000020302157,0.000036428475,0.000019965073,0.0001679104,0.000025668167,0.00021598824],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99871564,0.000018642133,0.00055047736,0.000390353,0.00008822639,0.00023664406],"domain_scores_gemma":[0.99939984,0.000054111308,0.00029230534,0.00021471047,0.000004115721,0.00003493566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015244886,0.00023937195,0.00080566714,0.0003430213,0.000014720768,0.00000509518,0.00036676854,0.00081821345,0.00039906343],"category_scores_gemma":[0.00012181338,0.0002110315,0.00018148588,0.0009469048,0.00010853574,0.000031589614,0.00015298223,0.00027333028,0.00008642545],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000003406761,0.000021104237,0.000009737532,0.0007462222,0.000012176681,0.000001614415,0.000024061606,0.0000023455113,0.010241971,0.000038866478,0.0009030881,0.9879954],"study_design_scores_gemma":[0.00017999612,0.00004609896,0.0000056300883,0.0003958665,0.000050488827,0.0000047976305,0.000002890859,0.000061185485,0.005297873,0.0000046312803,0.9937567,0.0001938093],"about_ca_topic_score_codex":0.000018712091,"about_ca_topic_score_gemma":0.00005298945,"teacher_disagreement_score":0.99285364,"about_ca_system_score_codex":0.00017037078,"about_ca_system_score_gemma":0.000016312742,"threshold_uncertainty_score":0.8605615},"labels":[],"label_agreement":null},{"id":"W3033020321","doi":"10.1016/b978-0-12-819025-8.00007-7","title":"Engineering bacterial aromatic dioxygenase genes to improve bioremediation","year":2020,"lang":"en","type":"book-chapter","venue":"Elsevier eBooks","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Ministry of Agriculture and Forestry","funders":"","keywords":"Dioxygenase; Bioremediation; Gene; Chemistry; Operon; Bacteria; Computational biology; Biochemistry; Biology; Genetics","score_opus":0.007903820329333134,"score_gpt":0.18643766553108107,"score_spread":0.17853384520174795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3033020321","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02663327,0.000065024724,0.000023544699,0.00041856096,0.002419777,0.0017839181,0.0002992884,0.00024353147,0.96811306],"genre_scores_gemma":[0.023202103,0.00006439823,0.0027916706,0.0015428071,0.0017263585,0.00003913231,0.00024021874,0.00018257879,0.97021073],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.998328,0.000013142797,0.00045011402,0.00055588374,0.000378492,0.00027436987],"domain_scores_gemma":[0.9991125,0.000022388289,0.00019069442,0.00032836103,0.000008788374,0.00033726383],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00012951589,0.00040175868,0.00036272066,0.000062495514,0.000054925255,0.00006379764,0.00030318295,0.00025428904,0.0027066823],"category_scores_gemma":[0.000043082797,0.00037614626,0.00014505726,0.000027708404,0.00004836264,0.000057191144,0.00026321184,0.00019898602,0.0073732906],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015805497,0.0000046015916,0.000009217024,0.000030398702,0.000023624061,0.000011266409,0.00013004916,0.0000062410213,0.49594235,0.000020492691,0.0006695831,0.5031364],"study_design_scores_gemma":[0.00024292686,0.000078258214,0.00019085027,0.00006788829,0.000044377935,0.000002724842,0.0000019636848,0.00006500263,0.024018502,0.00010533162,0.974616,0.000566205],"about_ca_topic_score_codex":0.0000015314464,"about_ca_topic_score_gemma":0.000030831052,"teacher_disagreement_score":0.9739464,"about_ca_system_score_codex":0.00021564322,"about_ca_system_score_gemma":0.000028292463,"threshold_uncertainty_score":0.99986905},"labels":[],"label_agreement":null},{"id":"W3036545465","doi":"10.1007/s11356-020-09650-y","title":"Degradation of BTEX mixture by a new Pseudomonas putida strain: role of the quorum sensing in the modulation of the upper BTEX oxidative pathway","year":2020,"lang":"en","type":"article","venue":"Environmental Science and Pollution Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"BTEX; Pseudomonas putida; Quorum sensing; Biodegradation; Strain (injury); Chemistry; Dioxygenase; Benzene; Microbiology; Gene; Biochemistry; Environmental chemistry; Xylene; Biology; Organic chemistry","score_opus":0.01975092269750435,"score_gpt":0.24829444259375544,"score_spread":0.2285435198962511,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3036545465","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929111,0.00004216898,0.00002105483,0.0061320625,0.000022596338,0.00039251166,0.00009016007,0.0000015633741,0.00038677704],"genre_scores_gemma":[0.99951804,0.00003243778,0.00006966552,0.00026465108,0.000010389033,7.2805125e-7,0.0000045510747,0.0000028667296,0.00009668203],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9978197,0.00028628958,0.0002242544,0.00022979507,0.0012233088,0.00021661755],"domain_scores_gemma":[0.99956226,0.000040931518,0.0001355842,0.00018789881,0.000008722644,0.00006459196],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001201764,0.000078274265,0.000085428444,0.000031915188,0.00023990465,0.000018871338,0.00042518153,0.000051033952,0.00019533884],"category_scores_gemma":[0.00012219827,0.000041945998,0.00003707743,0.0009337058,0.0016577471,0.00020391168,0.00028501937,0.00018265954,0.000008094939],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011251749,0.000035637924,0.025280446,0.0000023635503,0.000001245523,5.329757e-8,0.002330842,0.0000916149,0.963272,0.000050665276,0.00038377818,0.008540116],"study_design_scores_gemma":[0.00015819668,0.00005020332,0.50357294,0.000010365529,0.0000017985122,0.0000010785519,0.0021724056,0.001427641,0.4915735,0.00010597034,0.0008821558,0.00004374134],"about_ca_topic_score_codex":0.00046506076,"about_ca_topic_score_gemma":0.000089960704,"teacher_disagreement_score":0.4782925,"about_ca_system_score_codex":0.00012082189,"about_ca_system_score_gemma":0.000061784194,"threshold_uncertainty_score":0.6108038},"labels":[],"label_agreement":null},{"id":"W30371071","doi":"10.1021/acs.est.8b04239","title":"日本における「背教者」ユリアヌスの受容に関する考察(第十二部会, 第六十九回学術大会紀要)","year":2011,"lang":"en","type":"article","venue":"宗教研究","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ministry of Science and Technology of the People's Republic of China; National Natural Science Foundation of China; Ontario Genomics Institute; China Scholarship Council; Genome Canada; Government of Ontario; DuPont","keywords":"Computer science","score_opus":0.025106136917254492,"score_gpt":0.1736209266069189,"score_spread":0.14851478968966442,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W30371071","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7661505,0.000015869546,0.000055011897,0.00015611785,0.0003265823,0.0001235909,0.000011287639,0.00007843351,0.23308264],"genre_scores_gemma":[0.9933994,0.000020092368,0.0011380943,0.0010347742,0.000049604718,0.0000024549286,0.000006456186,0.000010296479,0.004338816],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99915004,0.000026206657,0.00015537467,0.0002347087,0.00018394228,0.00024970048],"domain_scores_gemma":[0.99958646,0.000008665363,0.000056124587,0.00022313072,0.0000049291716,0.000120702476],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00013464183,0.000110658315,0.00009427053,0.000018275021,0.000065893866,0.0000143866755,0.00022669022,0.00007273892,0.04195233],"category_scores_gemma":[0.000021248165,0.00009196632,0.000048952672,0.00014690809,0.000108156826,0.00012933418,0.00011426021,0.00007843494,0.017554024],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008413204,0.00029026894,0.3260089,0.000008511589,0.000023731765,0.00003641002,0.003033282,0.000004557403,0.46772635,0.0005311661,0.17957498,0.022677727],"study_design_scores_gemma":[0.00070114894,0.00012327702,0.53981626,0.00000913439,0.00001855691,0.000013601255,0.00012691498,0.00007521054,0.16494335,0.000701933,0.29297188,0.000498778],"about_ca_topic_score_codex":0.0002655877,"about_ca_topic_score_gemma":0.0001740664,"teacher_disagreement_score":0.30278298,"about_ca_system_score_codex":0.000050110066,"about_ca_system_score_gemma":0.0000067111077,"threshold_uncertainty_score":0.9832109},"labels":[],"label_agreement":null},{"id":"W3039579885","doi":"10.3389/fbioe.2020.00734","title":"Fish Waste Based Lipopeptide Production and the Potential Application as a Bio-Dispersant for Oil Spill Control","year":2020,"lang":"en","type":"article","venue":"Frontiers in Bioengineering and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":90,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Fisheries and Oceans Canada; Biotechnology Research Institute; Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Fisheries and Oceans Canada; Canada Foundation for Innovation","keywords":"Dispersant; Lipopeptide; Fish <Actinopterygii>; Oil spill; Environmental science; Fishery; Production (economics); Chemistry; Biology; Environmental engineering; Bacteria; Dispersion (optics)","score_opus":0.0029727586196215874,"score_gpt":0.16569175924867224,"score_spread":0.16271900062905065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3039579885","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8448737,0.00028271467,0.07804159,0.07559784,0.00039250447,0.00061408954,0.00003670842,0.0001393302,0.000021498994],"genre_scores_gemma":[0.99474347,0.00029294647,0.004148562,0.0007052728,0.000052190877,0.000026127052,0.000007515149,0.000007840107,0.000016072181],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9993288,0.000014410867,0.00014242748,0.00028881113,0.00006049091,0.00016506243],"domain_scores_gemma":[0.99979734,0.000009210855,0.000046215802,0.000099492965,0.0000044354333,0.000043271288],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015044652,0.000106253305,0.00014513517,0.00004635271,0.000057908936,0.00001624509,0.00010221359,0.00014916756,0.0000064471155],"category_scores_gemma":[0.000108390705,0.00007720984,0.000025296606,0.00018331941,0.00028689686,0.00003386571,0.0000406895,0.000109076675,0.000003594659],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006139389,0.00003279122,0.0039832434,0.000073352145,0.000029647417,0.0000026659159,0.00021132221,0.0030084036,0.90209305,0.000106386295,0.0043888805,0.08545634],"study_design_scores_gemma":[0.005911624,0.00030734242,0.0020202866,0.000037620954,0.00006836558,0.00002395291,0.00060200127,0.7063223,0.2516985,0.00015785261,0.03233837,0.00051176007],"about_ca_topic_score_codex":0.000040251034,"about_ca_topic_score_gemma":0.000017770399,"teacher_disagreement_score":0.70331395,"about_ca_system_score_codex":0.000029806677,"about_ca_system_score_gemma":0.0000037177344,"threshold_uncertainty_score":0.3148526},"labels":[],"label_agreement":null},{"id":"W3042390646","doi":"10.1111/1462-2920.15166","title":"Transcriptomic analysis of polyaromatic hydrocarbon degradation by the halophilic fungus <i>Aspergillus sydowii</i> at hypersaline conditions","year":2020,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Consejo Nacional de Ciencia y Tecnología","keywords":"Halophile; Biology; Phenanthrene; Bioremediation; Biodegradation; Transcriptome; Biotransformation; Biochemistry; Environmental chemistry; Xenobiotic; Microbiology; Gene expression; Enzyme; Gene; Chemistry; Ecology; Bacteria","score_opus":0.006556609888380142,"score_gpt":0.1803019321578524,"score_spread":0.17374532226947226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3042390646","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99682385,0.00022942702,0.000038127775,0.0012492074,0.00006987512,0.00026713352,0.0010295243,0.00002689326,0.00026598823],"genre_scores_gemma":[0.9952235,0.000043484848,0.00005590453,0.0021463537,0.000014746799,0.0000060388206,0.002193875,0.000014915042,0.00030118626],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99864525,0.00013873467,0.00044086427,0.00040050392,0.0001103921,0.00026425705],"domain_scores_gemma":[0.99940836,0.00005208689,0.00019764641,0.0002313246,0.0000011756899,0.00010942237],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010186605,0.00021113132,0.00031904437,0.00004263249,0.00015668993,0.000007052704,0.00030618912,0.00012377377,0.0071264836],"category_scores_gemma":[0.000009353483,0.00016096592,0.00017699716,0.00036272054,0.00056009187,0.00006707033,0.00013511181,0.000114363385,0.00077463774],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039651593,0.00009395262,0.012715646,0.0000030921344,0.00019479184,0.00000104308,0.000546852,0.00019328664,0.98334914,0.0000017594563,0.0026859636,0.00017482601],"study_design_scores_gemma":[0.0010086296,0.00024643433,0.04705153,0.000004250261,0.0008309665,0.000021123838,0.00026137452,0.0016074545,0.9194328,0.000003989097,0.029097594,0.0004338422],"about_ca_topic_score_codex":0.00008235254,"about_ca_topic_score_gemma":0.00016781737,"teacher_disagreement_score":0.063916326,"about_ca_system_score_codex":0.0002102803,"about_ca_system_score_gemma":0.000004882007,"threshold_uncertainty_score":0.9956659},"labels":[],"label_agreement":null},{"id":"W3042805457","doi":"10.1016/j.ab.2020.113853","title":"A ‘green’ approach to fixing polyacrylamide gels","year":2020,"lang":"en","type":"article","venue":"Analytical Biochemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"Natural Sciences and Engineering Research Council of Canada; Brock University","keywords":"Acetic acid; Hazardous waste; Citric acid; Polyacrylamide; Pulp and paper industry; Chemistry; Methanol; Environmental science; Waste management; Chromatography; Organic chemistry; Engineering","score_opus":0.016526860660638066,"score_gpt":0.22223510834195845,"score_spread":0.20570824768132037,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3042805457","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9160824,0.000010650212,0.00064186146,0.0066411872,0.000019741192,0.00010979233,0.000024229868,0.000072035196,0.07639813],"genre_scores_gemma":[0.98983145,0.0000018931082,0.0012386623,0.007510538,0.00010995311,0.000001575926,0.000017308215,0.000008383933,0.0012802639],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989025,0.000010580775,0.00017999845,0.0004006649,0.00024194957,0.00026432265],"domain_scores_gemma":[0.99931777,0.000014290634,0.00002989444,0.00016678747,0.000006252581,0.00046500211],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000071330134,0.00012848378,0.00012934256,0.000007842786,0.000045645887,0.00002893394,0.00025962346,0.00009128835,0.0020705396],"category_scores_gemma":[0.00012182347,0.00011340139,0.00007012461,0.0003506099,0.00008680425,0.000039442744,0.00021194799,0.0001180619,0.0021761765],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018411236,0.00005473058,0.0063757454,0.000016793096,0.00000995564,0.0000045246243,0.00010701129,0.000021493961,0.96763974,0.000014012781,0.024685986,0.0010515631],"study_design_scores_gemma":[0.00033713176,0.00005166343,0.004514132,0.000008467255,0.000029461837,0.000006991039,0.00013837134,0.0055864905,0.95879334,0.000026058688,0.030027293,0.00048058605],"about_ca_topic_score_codex":0.000048583686,"about_ca_topic_score_gemma":0.0000010941187,"teacher_disagreement_score":0.07511786,"about_ca_system_score_codex":0.00006222853,"about_ca_system_score_gemma":0.000011109508,"threshold_uncertainty_score":0.9988417},"labels":[],"label_agreement":null},{"id":"W3044590427","doi":"10.1186/s12896-020-00632-z","title":"Characterization and genomic analysis of a diesel-degrading bacterium, Acinetobacter calcoaceticus CA16, isolated from Canadian soil","year":2020,"lang":"en","type":"article","venue":"BMC Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Agriculture and Agri-Food Canada; University of Toronto; Western University","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Mitacs","keywords":"Acinetobacter calcoaceticus; Bioremediation; Diesel fuel; Biology; Acinetobacter; Bacteria; Human decontamination; Microbiology; Biodegradation; Biotechnology; Food science; Chemistry; Ecology; Waste management; Genetics; Organic chemistry","score_opus":0.010892451378305919,"score_gpt":0.1864341953809328,"score_spread":0.1755417440026269,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3044590427","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99540865,0.000015109099,0.0017833037,0.0021869799,0.00004740929,0.00012216915,0.0003414419,0.000050628285,0.0000443185],"genre_scores_gemma":[0.9983596,0.00006164085,0.0007537059,0.0005234088,0.000014511001,0.0000014595505,0.0002454564,0.000008889118,0.000031333973],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99906224,0.00003242954,0.00027918108,0.00033481378,0.00006749116,0.0002238588],"domain_scores_gemma":[0.99952203,0.000014531517,0.00013272357,0.000164774,0.000007766033,0.00015818057],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00005184619,0.00012999693,0.00027049487,0.00015822265,0.00005224594,0.00001670468,0.00016822116,0.00030136158,0.0013331755],"category_scores_gemma":[0.000045415956,0.00011968785,0.000049234102,0.0007877206,0.00016860072,0.000062843996,0.000110190915,0.00011728358,0.00010048254],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014574898,0.0000056959248,0.23566376,0.0000026636333,0.000050549585,0.0000014157209,0.00017754947,0.000008474839,0.7627435,0.0000050226145,0.000021411877,0.0013054337],"study_design_scores_gemma":[0.0002771861,0.000062627856,0.8201496,0.0000032900239,0.00021322024,0.0000013410296,0.00006720346,0.011857018,0.16173953,0.000002140567,0.0054204958,0.00020636848],"about_ca_topic_score_codex":0.032615263,"about_ca_topic_score_gemma":0.1538049,"teacher_disagreement_score":0.60100394,"about_ca_system_score_codex":0.000093397204,"about_ca_system_score_gemma":0.000019779163,"threshold_uncertainty_score":0.9995797},"labels":[],"label_agreement":null},{"id":"W3046352753","doi":"10.1007/s11270-020-04725-5","title":"Enhancement of Naphthalene Degradation by a Sequential Sulfate Injection Scenario in a (Semi)-Arid Coastal Soil: a Flow-Through Reactor Experiment","year":2020,"lang":"en","type":"article","venue":"Water Air & Soil Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Qatar National Research Fund; Canada Excellence Research Chairs, Government of Canada; Qatar National Library; Canada Research Chairs; Qatar Foundation","keywords":"Brackish water; Environmental remediation; Sulfate; Environmental science; Biodegradation; Salinity; Naphthalene; Bioremediation; Groundwater; Environmental engineering; Environmental chemistry; Soil salinity; Brackish marsh; Soil water; Soil science; Contamination; Chemistry; Geology; Ecology; Geotechnical engineering; Oceanography","score_opus":0.01490973842092233,"score_gpt":0.22196329768418235,"score_spread":0.20705355926326002,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3046352753","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99541676,0.000023336797,0.001999586,0.0014930663,0.00022585492,0.00035482633,0.00008670393,0.000037037007,0.0003628302],"genre_scores_gemma":[0.99868506,0.000041534622,0.00027726454,0.00041627276,0.000056649435,0.00001665048,0.00031410682,0.000014746003,0.00017771695],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982891,0.00010123937,0.00047505298,0.00040969058,0.0003882265,0.00033670405],"domain_scores_gemma":[0.9996047,0.0000039400243,0.0001396366,0.00013916014,0.000015097396,0.00009744579],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018233083,0.00019956444,0.00019637271,0.000036423568,0.00006510782,0.000020244785,0.00012227333,0.00011484636,0.0009790614],"category_scores_gemma":[0.000012568493,0.00016502739,0.000071489965,0.00022031515,0.000107553584,0.00039414116,0.00013353655,0.00012092916,0.00028969982],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021500236,0.00019003656,0.0017858215,0.000015131292,0.000010984993,0.0000022978809,0.0034923926,0.0009244583,0.9901392,0.0000017882818,0.0021738613,0.0010490239],"study_design_scores_gemma":[0.0009953995,0.00026058016,0.0016393255,0.000024255238,0.000010991,0.000003502717,0.00016319002,0.0023446914,0.9923717,0.000012553745,0.0019701875,0.00020366124],"about_ca_topic_score_codex":0.0035656537,"about_ca_topic_score_gemma":0.0011255641,"teacher_disagreement_score":0.0033292025,"about_ca_system_score_codex":0.00036463913,"about_ca_system_score_gemma":0.000023826831,"threshold_uncertainty_score":0.9999342},"labels":[],"label_agreement":null},{"id":"W3047878316","doi":"10.1002/cjce.23859","title":"Biodegradation of catechol by <scp><i>Pseudomonas fluorescens</i></scp> isolated from petroleum‐impacted soil","year":2020,"lang":"en","type":"article","venue":"The Canadian Journal of Chemical Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bioremediation; Biodegradation; Pseudomonas fluorescens; Catechol; Chemistry; Nitrate; Biostimulation; Environmental chemistry; Phosphate; Bioaugmentation; Organic chemistry; Bacteria; Biology","score_opus":0.006209215737642533,"score_gpt":0.16136484789329786,"score_spread":0.15515563215565534,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3047878316","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99816966,0.00009935259,0.00022800981,0.0012164201,0.000079722064,0.000044741242,0.00009073564,0.000010385064,0.00006100091],"genre_scores_gemma":[0.99943566,0.000005751977,0.000187037,0.0002616155,0.000064330736,2.0375798e-7,0.000020908854,0.000012529439,0.000011958915],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991557,0.000012382724,0.00031336397,0.0000964423,0.00020250841,0.00021962929],"domain_scores_gemma":[0.9991577,0.000057581437,0.00016644732,0.00008890199,0.000022930491,0.00050643476],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000112974565,0.00011579159,0.0001680958,0.000030226369,0.000030634765,0.000029071452,0.00031521305,0.00009011075,0.00021499633],"category_scores_gemma":[0.00029035375,0.000088292276,0.000067635876,0.00022989894,0.00007409726,0.00010240409,0.000020499203,0.00027909552,0.000029901894],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005062256,0.0000048434777,0.0009012021,0.000003184595,0.00001835313,0.000004851092,0.00029445748,0.0013383436,0.98766255,0.0000010602455,0.009622856,0.00014322347],"study_design_scores_gemma":[0.00030698004,0.0000308512,0.0007245692,0.00001876072,0.000020645872,0.000009319643,0.000015960806,0.00882618,0.9867532,0.0000064345854,0.0032321888,0.000054865563],"about_ca_topic_score_codex":0.003065199,"about_ca_topic_score_gemma":0.00022997589,"teacher_disagreement_score":0.007487837,"about_ca_system_score_codex":0.00015521531,"about_ca_system_score_gemma":0.00006801306,"threshold_uncertainty_score":0.46336842},"labels":[],"label_agreement":null},{"id":"W3048741073","doi":"10.1016/j.rsma.2020.101395","title":"Effects of marine oil pollution on microbial diversity in coastal waters and stimulating indigenous microorganism bioremediation with nutrients","year":2020,"lang":"en","type":"article","venue":"Regional Studies in Marine Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Zhejiang Province Public Welfare Technology Application Research Project; Bureau of Science and Technology of Zhoushan; National Natural Science Foundation of China","keywords":"Bioremediation; Nutrient; Microorganism; Oil pollution; Environmental science; Pollution; Indigenous; Ecology; Biology; Environmental engineering; Bacteria; Contamination","score_opus":0.018777972116926604,"score_gpt":0.22835402097314028,"score_spread":0.20957604885621367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3048741073","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999184,0.000006556422,0.0000059886506,0.0004577514,0.00006314901,0.00016694999,0.0000044222343,0.000009193368,0.00010194993],"genre_scores_gemma":[0.9986334,0.00013916212,0.0008189822,0.00036566207,0.00001675374,0.0000012979438,0.0000049152395,0.0000038916605,0.000015930098],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987686,0.000034452652,0.00018757115,0.00036073625,0.00040288238,0.00024571133],"domain_scores_gemma":[0.99968034,0.000052696258,0.00010998723,0.00005917391,0.000022695476,0.000075124975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024769714,0.00012598946,0.00017125926,0.000089090456,0.00019573868,0.000010431775,0.00018448872,0.00003184737,0.000012820475],"category_scores_gemma":[0.00010875069,0.00010046973,0.000014416935,0.0007549021,0.00096975826,0.00016074849,0.0016072588,0.000098862365,0.000007903732],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015110052,0.0000853473,0.71166337,0.000045357534,0.0000046031614,0.0000126580135,0.0034657768,0.0002956411,0.2804048,0.0000068249615,0.000024921312,0.0038395915],"study_design_scores_gemma":[0.0014578886,0.0002993306,0.9454936,0.000051033978,0.0000063412936,0.0000035783755,0.0002915328,0.00013729538,0.05203344,0.00003884593,0.000029767758,0.00015736133],"about_ca_topic_score_codex":0.0005271964,"about_ca_topic_score_gemma":0.00040798585,"teacher_disagreement_score":0.2338302,"about_ca_system_score_codex":0.00022919234,"about_ca_system_score_gemma":0.000023607374,"threshold_uncertainty_score":0.40970367},"labels":[],"label_agreement":null},{"id":"W3080381206","doi":"10.1093/femsec/fiaa156","title":"Phenanthrene contamination and ploidy level affect the rhizosphere bacterial communities of Spartina spp.","year":2020,"lang":"en","type":"article","venue":"FEMS Microbiology Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Erasmus+; European Commission; Ministère de l'Enseignement Supérieur et de la Recherche; Natural Sciences and Engineering Research Council of Canada; Centre National de la Recherche Scientifique; Compute Canada","keywords":"Rhizosphere; Biology; Spartina; Botany; Salt marsh; Bacteria; 16S ribosomal RNA; Phenanthrene; Interspecific competition; Contamination; Ecology; Marsh; Genetics; Wetland","score_opus":0.025729496658281874,"score_gpt":0.21612866984853568,"score_spread":0.19039917319025382,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3080381206","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99649465,0.000030692874,0.000020291869,0.002328657,0.00029236355,0.00026433854,0.00012598124,0.000019363924,0.0004236437],"genre_scores_gemma":[0.9983372,0.000059607846,0.0001347205,0.0011757627,0.000049633694,0.000003829147,0.000118142074,0.000007655243,0.000113410555],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990542,0.00027408396,0.00024664885,0.00017417799,0.000028901464,0.00022200079],"domain_scores_gemma":[0.9994538,0.00017719947,0.00017914684,0.00012877244,0.000012895368,0.000048223086],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021680705,0.00013064167,0.00023806641,0.000010112985,0.00011749751,0.000008988571,0.00023381515,0.00016398933,0.0061511737],"category_scores_gemma":[0.000057084562,0.00009070085,0.000036444002,0.000085142856,0.0008472586,0.000052165466,0.00026231346,0.00013547119,0.00032679675],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000076876,0.000035954698,0.08715856,0.0000062850518,0.000017892666,0.0000010850218,0.0010118365,0.0000039167876,0.90278316,0.000027499584,0.008114027,0.0007629397],"study_design_scores_gemma":[0.0017998015,0.00090339425,0.67044646,0.000009589949,0.00004509786,0.00005204871,0.0013010633,0.00009825021,0.28286672,0.00004111337,0.0421308,0.00030566467],"about_ca_topic_score_codex":0.00020953204,"about_ca_topic_score_gemma":0.0053711953,"teacher_disagreement_score":0.6199164,"about_ca_system_score_codex":0.00003211575,"about_ca_system_score_gemma":0.000014112127,"threshold_uncertainty_score":0.99475735},"labels":[],"label_agreement":null},{"id":"W3083611429","doi":"10.1101/2020.09.04.284042","title":"Soil characteristics constrain the response of bacterial and fungal communities and hydrocarbon degradation genes to phenanthrene soil contamination and phytoremediation with poplars","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Université du Québec; Institut National de la Recherche Scientifique; Natural Resources Canada","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada; Compute Canada","keywords":"Rhizosphere; Microorganism; Phenanthrene; Soil water; Microbial population biology; Soil contamination; Bulk soil; Contamination; Bioremediation; Soil microbiology; Phytoremediation; Environmental chemistry; Context (archaeology); Biology; Agronomy; Chemistry; Bacteria; Ecology","score_opus":0.011368314241542292,"score_gpt":0.1905593624932525,"score_spread":0.1791910482517102,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3083611429","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978296,0.00012300118,0.00018332241,0.000667108,0.000234864,0.0005297347,0.00039247493,0.00003845143,0.0000014086228],"genre_scores_gemma":[0.9985362,0.0005990641,0.0005425226,0.00017324819,0.000094617586,0.000021927015,0.0000045016823,0.000026864129,0.0000010434069],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99857545,0.0002726308,0.00034071584,0.00035720033,0.0002668899,0.00018713191],"domain_scores_gemma":[0.9990034,0.00012752919,0.00037876252,0.00027469287,0.00006583712,0.00014979113],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054225,0.00027944386,0.00031074043,0.000065025764,0.00015389427,0.00013866191,0.00015650707,0.00018311305,0.000021994236],"category_scores_gemma":[0.00012870907,0.00022557499,0.000019556024,0.00015678105,0.00046551434,0.00013341368,0.00033836954,0.00021336383,0.0000028741522],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004258043,0.000026073847,0.052725967,0.00007127323,0.000030457373,0.000002871463,0.00024342259,0.0000044897997,0.94635075,0.000013855624,0.000025562067,0.000079480145],"study_design_scores_gemma":[0.00048892834,0.00013350515,0.6644993,0.00009878388,0.000068042405,7.852549e-8,0.000049732535,0.0004948684,0.33367974,6.0893717e-7,0.00022138316,0.00026506238],"about_ca_topic_score_codex":0.00015267092,"about_ca_topic_score_gemma":0.000120040095,"teacher_disagreement_score":0.612671,"about_ca_system_score_codex":0.0000829287,"about_ca_system_score_gemma":0.000091308735,"threshold_uncertainty_score":0.9198681},"labels":[],"label_agreement":null},{"id":"W3083835685","doi":"10.1002/wer.1454","title":"Indigenous microbial communities in Albertan sediments are capable of anaerobic benzene biodegradation under methanogenic, sulfate‐reducing, nitrate‐reducing, and iron‐reducing redox conditions","year":2020,"lang":"en","type":"article","venue":"Water Environment Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Bioremediation; Environmental chemistry; Environmental remediation; Microcosm; Nitrate; Geobacter; Sulfate-reducing bacteria; Sulfate; Context (archaeology); Biodegradation; Microbial population biology; Contamination; Chemistry; Environmental science; Ecology; Biology; Bacteria; Biofilm; Organic chemistry","score_opus":0.04512476509242462,"score_gpt":0.2774643291984982,"score_spread":0.2323395641060736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3083835685","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99742943,0.00013125794,0.00001752037,0.0012138041,0.000056841236,0.0007166142,0.00012175804,0.000020292797,0.00029248692],"genre_scores_gemma":[0.9975098,0.0005331454,0.0005907693,0.00017852064,0.000037119054,0.000023972756,0.00046216822,0.000035641417,0.00062886346],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967656,0.00056024245,0.00059583713,0.0005915563,0.0006588615,0.0008278963],"domain_scores_gemma":[0.9990647,0.00007836925,0.0001477489,0.0004143114,0.000016612083,0.00027826105],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009929087,0.0002877374,0.00034995124,0.00020998428,0.0003802054,0.000080615544,0.00042324848,0.00018560095,0.0056502284],"category_scores_gemma":[0.000020240643,0.0002482766,0.00006265968,0.00031937732,0.0007074025,0.00032482197,0.0005856931,0.0004969393,0.00041964863],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056685356,0.00027660775,0.023120385,0.000048224036,0.00002949324,0.0000066849243,0.011161783,0.0041319947,0.95969975,0.0000035951568,0.001129161,0.0003356494],"study_design_scores_gemma":[0.001132277,0.0002800027,0.03722299,0.00006858695,0.000025928937,0.000008266528,0.0033922405,0.00045022863,0.9550807,0.00005639726,0.0018998755,0.00038250544],"about_ca_topic_score_codex":0.013075605,"about_ca_topic_score_gemma":0.00086094625,"teacher_disagreement_score":0.014102603,"about_ca_system_score_codex":0.00046190695,"about_ca_system_score_gemma":0.000032270735,"threshold_uncertainty_score":0.99999696},"labels":[],"label_agreement":null},{"id":"W3092091981","doi":"10.1016/j.jhazmat.2020.124139","title":"Combined remediation of polychlorinated naphthalene-contaminated soil under multiple scenarios: An integrated method of genetic engineering and environmental remediation technology","year":2020,"lang":"en","type":"article","venue":"Journal of Hazardous Materials","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Central Universities in China; China Scholarship Council; Science and Technology Commission of Shanghai Municipality","keywords":"Bioremediation; Environmental remediation; Soil contamination; Environmental science; Contamination; Environmental chemistry; Environmental engineering; Biochemical engineering; Chemistry; Soil water; Soil science; Engineering; Ecology; Biology","score_opus":0.00893646214548164,"score_gpt":0.20926888618105594,"score_spread":0.2003324240355743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3092091981","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99734944,0.00004248379,0.0018234096,0.00025697617,0.00025035444,0.00018483266,0.00007116071,0.00001796409,0.0000033833026],"genre_scores_gemma":[0.9898868,0.00013337952,0.009830809,0.000051785766,0.000040913157,0.0000011208664,0.000032855532,0.00001738663,0.000004907108],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983728,0.0001259288,0.00087164453,0.00017887985,0.00028870863,0.00016204292],"domain_scores_gemma":[0.9987961,0.00004797003,0.00090062345,0.000113427355,0.000038485094,0.00010336072],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004435526,0.00016313243,0.0004340017,0.00014081757,0.00002706053,0.0000156907,0.00018558337,0.00016495658,0.00036163916],"category_scores_gemma":[0.00022161477,0.00014033252,0.00004287337,0.00023974442,0.00010226802,0.00019762889,0.00007516072,0.000109532215,0.0000058210485],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002467957,0.000096155345,0.012485775,0.000028876631,0.000035354613,0.000009761474,0.00034838295,0.0012890131,0.98361003,0.0000036282781,0.00002903111,0.0018172073],"study_design_scores_gemma":[0.0014179877,0.0007279497,0.047744576,0.00003349149,0.000046053286,0.000045538312,0.0003212696,0.0022713246,0.94714165,0.000023425087,0.000091447226,0.00013531338],"about_ca_topic_score_codex":0.000057590943,"about_ca_topic_score_gemma":0.000014076323,"teacher_disagreement_score":0.036468394,"about_ca_system_score_codex":0.00009299855,"about_ca_system_score_gemma":0.000024175075,"threshold_uncertainty_score":0.57225937},"labels":[],"label_agreement":null},{"id":"W3092308792","doi":"10.3390/microorganisms8101532","title":"Combined Use of Diagnostic Fumarate Addition Metabolites and Genes Provides Evidence for Anaerobic Hydrocarbon Biodegradation in Contaminated Groundwater","year":2020,"lang":"en","type":"article","venue":"Microorganisms","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biodegradation; Environmental chemistry; Bioremediation; Hydrocarbon; Microbial population biology; Chemistry; Environmental remediation; Contamination; Biology; Bacteria; Ecology; Organic chemistry","score_opus":0.04271249836923988,"score_gpt":0.23118813856627873,"score_spread":0.18847564019703886,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3092308792","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99817324,0.00016694311,0.0002808927,0.0006418031,0.000041989748,0.00060703355,0.00006292253,0.000022796079,0.0000023829314],"genre_scores_gemma":[0.9972865,0.00024355407,0.0018391057,0.0004419866,0.000011856905,0.000012684269,0.000121323676,0.00001165987,0.000031352403],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991077,0.0000662217,0.00028769113,0.00028163462,0.000096504555,0.00016020716],"domain_scores_gemma":[0.9994093,0.00030126044,0.0001253245,0.000083155974,0.00001742715,0.00006353814],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013182923,0.00012924238,0.00018103239,0.000034039687,0.000039626895,0.00004644212,0.00008890993,0.000065089545,0.00025032207],"category_scores_gemma":[0.00042148464,0.00011260907,0.000026510475,0.00022734198,0.00011211622,0.00041028904,0.000063183084,0.00004378497,0.000029497096],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000075973825,0.000043887678,0.03233798,0.000029412215,0.00000571012,0.0000011468754,0.00034451054,0.000011574744,0.96506053,0.0000095165515,0.00031993637,0.001759836],"study_design_scores_gemma":[0.0006078165,0.00021993791,0.1159773,0.000034883895,0.000023648763,6.438899e-7,0.000035156932,0.00065425487,0.8815431,0.000029948471,0.00073586026,0.00013744766],"about_ca_topic_score_codex":0.0003439583,"about_ca_topic_score_gemma":0.0002497871,"teacher_disagreement_score":0.083639316,"about_ca_system_score_codex":0.00004566273,"about_ca_system_score_gemma":0.000009999121,"threshold_uncertainty_score":0.4592065},"labels":[],"label_agreement":null},{"id":"W3093974804","doi":"10.1101/2020.10.25.354597","title":"Biotransformation of lindane (γ-hexachlorocyclohexane) to non-toxic end products by sequential treatment with three mixed anaerobic microbial cultures","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Ontario","keywords":"Lindane; Hexachlorocyclohexane; Reductive dechlorination; Environmental chemistry; Biotransformation; Chemistry; Enrichment culture; Anaerobic bacteria; Dehalococcoides; Chlorobenzene; Biodegradation; Pesticide; Biology; Bacteria; Ecology; Organic chemistry; Vinyl chloride","score_opus":0.01123431135006046,"score_gpt":0.202130595396308,"score_spread":0.19089628404624756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3093974804","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937574,0.000102266524,0.0012274344,0.0010068647,0.00050453155,0.0019707936,0.0012597104,0.00015211367,0.00001885652],"genre_scores_gemma":[0.99275595,0.00016483643,0.0065093525,0.00022727968,0.00018775958,0.000056848665,0.000010729441,0.00007691101,0.000010322792],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99696004,0.00008568655,0.0006808366,0.0011724513,0.0005503151,0.0005506433],"domain_scores_gemma":[0.99825186,0.000013000007,0.0004939822,0.0007380948,0.00011046295,0.00039259202],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00019919033,0.0007110226,0.00065613486,0.00011603902,0.00013750696,0.00013151845,0.00057327474,0.0004391346,0.0003554722],"category_scores_gemma":[0.000030031848,0.0005961464,0.00013414992,0.00070189865,0.00026706877,0.00020539633,0.0002931857,0.00035094316,0.00024302065],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017297125,0.00025845307,0.0030117347,0.00015010303,0.00012210307,0.000012682401,0.0000825017,0.00014873833,0.9936465,0.0000032971461,0.002372519,0.00001836457],"study_design_scores_gemma":[0.0009020566,0.00041937438,0.028457673,0.00012437564,0.00013485538,5.1117357e-8,0.0000035263456,0.00006394519,0.95851624,2.2534132e-7,0.010689037,0.00068861863],"about_ca_topic_score_codex":0.0004510363,"about_ca_topic_score_gemma":0.0002180604,"teacher_disagreement_score":0.03513027,"about_ca_system_score_codex":0.0006652015,"about_ca_system_score_gemma":0.00024781455,"threshold_uncertainty_score":0.999649},"labels":[],"label_agreement":null},{"id":"W3094281114","doi":"10.1128/aem.02170-20","title":"Soil Characteristics Constrain the Response of Microbial Communities and Associated Hydrocarbon Degradation Genes during Phytoremediation","year":2020,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Institut National de la Recherche Scientifique; Natural Resources Canada","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Phytoremediation; Environmental remediation; Phenanthrene; Bioremediation; Environmental chemistry; Environmental science; Soil contamination; Soil water; Microbial biodegradation; Polycyclic aromatic hydrocarbon; Biodegradation; Microbial population biology; Bioaugmentation; Soil microbiology; Microorganism; Contamination; Chemistry; Biology; Bacteria; Ecology; Soil science","score_opus":0.007770883735801251,"score_gpt":0.16589356516173015,"score_spread":0.1581226814259289,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3094281114","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990061,0.000045471665,0.000008794338,0.00042201058,0.000036450503,0.00018948929,0.00023503989,0.000013738369,0.000042928885],"genre_scores_gemma":[0.99878156,0.00029098845,0.000041250707,0.0005463653,0.000021124726,0.0000034378672,0.0002905164,0.000008963575,0.000015776546],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992632,0.00012626135,0.00023560591,0.00017086069,0.00004715634,0.00015689699],"domain_scores_gemma":[0.9996148,0.00008090897,0.00016675111,0.000083757855,0.0000012382702,0.00005255975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017826312,0.0001365208,0.00016791666,0.000014280958,0.00014129058,0.000011875872,0.00009805798,0.0001047238,0.00016400078],"category_scores_gemma":[0.000011809475,0.00010960523,0.000021639553,0.000048847847,0.0007417887,0.000037686696,0.00017626853,0.00010591004,0.000019850953],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015575143,0.000028348175,0.04546209,0.0000059378012,0.000013852658,4.3865919e-7,0.0011984982,0.0000036410422,0.9522857,0.000003363133,0.000043920983,0.000798469],"study_design_scores_gemma":[0.00092105987,0.000096779324,0.41236874,0.00000582596,0.00002865016,0.000016305376,0.0012591456,0.00010538862,0.5843115,0.0000074341883,0.0006789971,0.0002002081],"about_ca_topic_score_codex":0.000034057215,"about_ca_topic_score_gemma":0.000030175517,"teacher_disagreement_score":0.36797422,"about_ca_system_score_codex":0.00004422938,"about_ca_system_score_gemma":0.000004587959,"threshold_uncertainty_score":0.44695714},"labels":[],"label_agreement":null},{"id":"W3106591867","doi":"10.1007/s11274-020-02962-8","title":"Transformation of TNT, 2,4-DNT, and PETN by Raoultella planticola M30b and Rhizobium radiobacter M109 and exploration of the associated enzymes","year":2020,"lang":"en","type":"article","venue":"World Journal of Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Departamento Administrativo de Ciencia, Tecnología e Innovación (COLCIENCIAS); Craft Ontario","keywords":"Transformation (genetics); Enzyme; Bacteria; Biotransformation; Chemistry; Microbiology; Gene; Xenobiotic; Reductase; Biochemistry; Biology; Genetics","score_opus":0.008780527794602007,"score_gpt":0.18804414813365702,"score_spread":0.17926362033905502,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3106591867","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9865329,0.00078518724,0.00003513236,0.012372771,0.00005555694,0.00011529313,0.00005926577,0.0000051905427,0.000038668702],"genre_scores_gemma":[0.99760574,0.0018629811,0.00011356993,0.00037050404,0.000008455869,2.2212949e-7,0.000006465559,0.0000031191994,0.000028922877],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992831,0.0000940114,0.00036215832,0.000117586176,0.000037765443,0.00010541045],"domain_scores_gemma":[0.99946713,0.00004674176,0.0003876993,0.000045733854,0.0000144903925,0.000038195423],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023970721,0.00009654749,0.0002436819,0.000057498826,0.000056624838,0.000006622249,0.00009190018,0.00020733113,0.000046513567],"category_scores_gemma":[0.000045773657,0.00006332523,0.000025855563,0.0001509046,0.000605115,0.0001223642,0.00006702119,0.00019738257,7.690454e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000096053824,0.000023480286,0.01481123,0.000014589699,0.000027524038,6.2826e-7,0.0004814008,5.1991645e-7,0.9810626,0.0000686291,0.0017045902,0.0017087362],"study_design_scores_gemma":[0.0013449312,0.00036100394,0.014782592,0.000040116654,0.00005460592,0.00014960686,0.00026295573,0.000025533827,0.96584105,0.00006603285,0.016958974,0.000112605216],"about_ca_topic_score_codex":0.000009072686,"about_ca_topic_score_gemma":0.00008699056,"teacher_disagreement_score":0.015254385,"about_ca_system_score_codex":0.000011452425,"about_ca_system_score_gemma":0.000007638753,"threshold_uncertainty_score":0.25823277},"labels":[],"label_agreement":null},{"id":"W3107914167","doi":"10.1111/1751-7915.13704","title":"Microbial biosurfactant research: time to improve the rigour in the reporting of synthesis, functional characterization and process development","year":2020,"lang":"en","type":"review","venue":"Microbial Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":119,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"European Commission; Invest Northern Ireland","keywords":"Rigour; Biochemical engineering; Characterization (materials science); Identification (biology); Process (computing); Computer science; Field (mathematics); Nanotechnology; Process engineering; Biology; Engineering; Materials science; Ecology","score_opus":0.05609245095863715,"score_gpt":0.2999382634349499,"score_spread":0.24384581247631273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3107914167","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48835102,0.41436318,0.00039200558,0.06037331,0.0022333744,0.030074717,0.0025600754,0.00069304486,0.0009592536],"genre_scores_gemma":[0.02949824,0.9644393,0.0016545111,0.0015593895,0.00048905663,0.0004716183,0.00075390184,0.00021521632,0.00091878837],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9961238,0.0004000383,0.0018347166,0.00078740186,0.00035204008,0.00050201186],"domain_scores_gemma":[0.9978955,0.00020293449,0.001378991,0.0004187323,0.00003908651,0.00006477709],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0026606724,0.00037445038,0.0009449681,0.00024444712,0.00025567276,0.000065031316,0.00087172724,0.00067826844,0.00051090686],"category_scores_gemma":[0.0011756781,0.00022008902,0.000118276956,0.0015105775,0.0005611406,0.000063922154,0.0006595523,0.00086775265,0.0008724819],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018616242,0.000055777626,0.000014600244,0.00040095134,0.000022809692,0.0000104792825,0.00027997023,2.3277944e-7,0.55116427,0.0000042762913,0.00081971183,0.44720832],"study_design_scores_gemma":[0.00008719812,0.000052794592,0.00019852657,0.00063322106,0.00004259009,0.000093546056,0.00004924267,0.0000024025544,0.064255424,0.0000027968265,0.93432355,0.00025868154],"about_ca_topic_score_codex":0.000042388278,"about_ca_topic_score_gemma":0.00007421791,"teacher_disagreement_score":0.93350387,"about_ca_system_score_codex":0.0002617499,"about_ca_system_score_gemma":0.00024893184,"threshold_uncertainty_score":0.99990547},"labels":[],"label_agreement":null},{"id":"W3108278427","doi":"10.1016/j.biortech.2020.124464","title":"Psychrozymes as novel tools to biodegrade p-xylene and potential use for contaminated groundwater in the cold climate","year":2020,"lang":"en","type":"article","venue":"Bioresource Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University; Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biodegradation; Xylene; Chemistry; Bioremediation; Environmental chemistry; Pseudomonas; Degradation (telecommunications); Dioxygenase; Environmental science; Toluene; Contamination; Organic chemistry; Bacteria; Enzyme; Biology; Ecology","score_opus":0.026123460352375904,"score_gpt":0.23520885829417404,"score_spread":0.20908539794179815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3108278427","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9770698,0.000017422051,0.00028904414,0.021669924,0.000038565322,0.00070772227,0.00006918563,0.00009041542,0.0000479419],"genre_scores_gemma":[0.9923603,0.000025591855,0.0013821672,0.0061177867,0.000020405023,0.00003026356,0.000013512623,0.000011519105,0.000038456496],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99895686,0.000022182403,0.00020724554,0.00036280716,0.000116832314,0.00033407935],"domain_scores_gemma":[0.99965405,0.000038500348,0.00005679528,0.00017257115,0.000007418285,0.00007063878],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014755334,0.00014287813,0.00015266486,0.0000712346,0.00009396325,0.00007375766,0.00032362054,0.0001919114,0.00012880482],"category_scores_gemma":[0.000107345615,0.00010034835,0.000031701748,0.00043250216,0.00023502063,0.00008209684,0.00019651283,0.00011251171,0.0001422749],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008050969,0.00007268074,0.017438468,0.0000055518917,0.000004927865,0.000006681098,0.0003480352,0.000005263261,0.977282,0.00035370287,0.0021600316,0.0022421896],"study_design_scores_gemma":[0.0032923263,0.0014648025,0.13150096,0.000024843499,0.000038972696,0.00006699095,0.0013811527,0.0006461081,0.35988933,0.00007583291,0.5009701,0.00064857997],"about_ca_topic_score_codex":0.00010973111,"about_ca_topic_score_gemma":0.00014303705,"teacher_disagreement_score":0.61739266,"about_ca_system_score_codex":0.00003416955,"about_ca_system_score_gemma":0.0000040101118,"threshold_uncertainty_score":0.4092087},"labels":[],"label_agreement":null},{"id":"W3108747293","doi":"10.1016/j.envpol.2020.116101","title":"Guiding environmental sustainability of emerging bioconversion technology for waste-derived sophorolipid production by adopting a dynamic life cycle assessment (dLCA) approach","year":2020,"lang":"en","type":"article","venue":"Environmental Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Horizon 2020 Framework Programme","keywords":"Biochemical engineering; Sustainability; Life-cycle assessment; Bioconversion; Raw material; Production (economics); Biorefinery; Environmental impact assessment; Environmental science; Environmental economics; Engineering; Ecology; Fermentation; Chemistry; Economics; Biology","score_opus":0.007491209258839062,"score_gpt":0.21499361442226905,"score_spread":0.20750240516343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3108747293","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9870065,0.000093369665,0.008051161,0.00313067,0.00014027473,0.0012577709,0.00018422112,0.00006974884,0.000066314664],"genre_scores_gemma":[0.99620223,0.00008421647,0.0030606259,0.00021738267,0.00005783087,0.000037787555,0.0002617821,0.00002999029,0.000048160793],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978434,0.00008803264,0.0005170538,0.00074638834,0.00038373657,0.00042139893],"domain_scores_gemma":[0.999213,0.0000127134745,0.00035634678,0.00023408276,0.0000033679955,0.00018051073],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00032436312,0.00027309897,0.00027062188,0.00006326746,0.00027870224,0.0000143762745,0.000232268,0.0001828796,0.0003750856],"category_scores_gemma":[0.000088535926,0.0002852414,0.000113600705,0.00024366518,0.00042778766,0.0002994743,0.0003160087,0.00014010623,0.00003573767],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008574765,0.00029901922,0.007947766,0.000045649613,0.000020264604,3.025623e-7,0.00035980906,0.0039641247,0.9800156,0.0000038022022,0.00056032307,0.0066976217],"study_design_scores_gemma":[0.0029702631,0.00085674046,0.026174063,0.000027543088,0.00013735186,0.000009733975,0.02085113,0.104513206,0.8385906,0.000112957445,0.0046553523,0.0011010201],"about_ca_topic_score_codex":0.0000175042,"about_ca_topic_score_gemma":0.0000011713798,"teacher_disagreement_score":0.14142492,"about_ca_system_score_codex":0.0012187631,"about_ca_system_score_gemma":0.000021435291,"threshold_uncertainty_score":0.99995995},"labels":[],"label_agreement":null},{"id":"W3111771842","doi":"10.1016/j.envpol.2020.116358","title":"Tracking gene expression, metabolic profiles, and biochemical analysis in the halotolerant basidiomycetous yeast Rhodotorula mucilaginosa EXF-1630 during benzo[a]pyrene and phenanthrene biodegradation under hypersaline conditions","year":2020,"lang":"en","type":"article","venue":"Environmental Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Consejo Nacional de Ciencia y Tecnología","keywords":"Pyrene; Phenanthrene; Biodegradation; Benzo(a)pyrene; Halotolerance; Chemistry; Yeast; Biochemistry; Environmental chemistry; Food science; Microbiology; Biology; Bacteria; Organic chemistry","score_opus":0.012248439565875478,"score_gpt":0.2072727478331666,"score_spread":0.1950243082672911,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3111771842","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99758804,0.00045678744,0.00029908578,0.001047916,0.000024540604,0.00031770562,0.0002219483,0.000025895362,0.00001807338],"genre_scores_gemma":[0.9984018,0.00020839531,0.00047533988,0.00044303923,0.000054652122,0.000011349136,0.00038425336,0.000012151115,0.000009004913],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998579,0.00011877597,0.0003067063,0.00046005863,0.00029792497,0.00023749823],"domain_scores_gemma":[0.9995848,0.000013558934,0.00011292795,0.00015315422,0.000001510553,0.00013407646],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000161653,0.00019936624,0.00020682879,0.00007187881,0.00024507742,0.00005037008,0.00011967765,0.00009346668,0.00044575747],"category_scores_gemma":[0.000012685987,0.00015491413,0.00005715145,0.0003362491,0.00027030392,0.00023633242,0.000119394404,0.00013423787,0.000036895526],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025556787,0.00009464157,0.03139702,0.000004691124,0.000025148487,0.000003782489,0.00071267853,0.00022970405,0.96696526,0.0000046517653,0.000043937926,0.00049290806],"study_design_scores_gemma":[0.0004641363,0.000014873775,0.48880953,0.000005365695,0.00007463611,0.000010870511,0.0003643182,0.0006343464,0.5093479,0.000005597023,0.00012651873,0.00014189749],"about_ca_topic_score_codex":0.000075789,"about_ca_topic_score_gemma":0.000030517804,"teacher_disagreement_score":0.45761734,"about_ca_system_score_codex":0.00008820203,"about_ca_system_score_gemma":0.0000046998994,"threshold_uncertainty_score":0.6317215},"labels":[],"label_agreement":null},{"id":"W3111950504","doi":"10.1038/s41598-020-78733-0","title":"Biodegradation of selected hydrocarbons by novel bacterial strains isolated from contaminated Arabian Gulf sediment","year":2020,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"National Plan for Science, Technology and Innovation; King Abdulaziz City for Science and Technology; King Fahd University of Petroleum and Minerals","keywords":"Pyrene; Naphthalene; Proteus mirabilis; Rhodococcus; Biodegradation; Environmental chemistry; Hydrocarbon; Polycyclic aromatic hydrocarbon; Chemistry; Microbiology; Sediment; Bacteria; Bioremediation; Contamination; Organic chemistry; Biology; Staphylococcus aureus; Ecology","score_opus":0.010387589698129526,"score_gpt":0.19489124449832637,"score_spread":0.18450365480019684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3111950504","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963025,0.000008382533,0.00062987744,0.00046992634,0.0015019925,0.00032565903,0.0001901357,0.00006800959,0.00050355104],"genre_scores_gemma":[0.9974704,0.000001668244,0.0003698568,0.00009509381,0.000029239101,0.0000020323637,0.001658963,0.00001019151,0.00036255745],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979373,0.00004133293,0.0005864186,0.00070699287,0.00048360732,0.00024431892],"domain_scores_gemma":[0.9990122,0.0000120520735,0.00043463014,0.0003039401,0.000033367938,0.00020381273],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002931297,0.00015655745,0.00019721208,0.000032870405,0.00011366343,0.000092692004,0.00015787111,0.000102016085,0.004802625],"category_scores_gemma":[0.000111572124,0.00014269767,0.00005246397,0.0008148247,0.00025123896,0.00017771072,0.00008271708,0.00008769759,0.00016332527],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018853492,0.00010748422,0.005958617,0.0000020034036,0.000014225091,0.000008723813,0.0003828726,0.00000647988,0.95622766,4.257308e-7,0.036912143,0.00036049675],"study_design_scores_gemma":[0.00047663818,0.00008593556,0.01044396,0.000011329353,0.000025777199,0.000005907674,0.000044001936,0.0021912206,0.9658244,0.000028832701,0.020629913,0.00023205411],"about_ca_topic_score_codex":0.00046263446,"about_ca_topic_score_gemma":0.00014377161,"teacher_disagreement_score":0.016282229,"about_ca_system_score_codex":0.000084630185,"about_ca_system_score_gemma":0.000059228903,"threshold_uncertainty_score":0.9961071},"labels":[],"label_agreement":null},{"id":"W3114690628","doi":"10.3390/microorganisms9010090","title":"The Effect of an Adsorbent Matrix on Recovery of Microorganisms from Hydrocarbon-Contaminated Groundwater","year":2021,"lang":"en","type":"article","venue":"Microorganisms","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Northern Alberta Institute of Technology; University of Toronto; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Tenax; Microcosm; Environmental chemistry; Microorganism; Biodegradation; Microbial population biology; Microbial biodegradation; Hydrocarbon; Bioremediation; Environmental remediation; Contamination; Chemistry; Toluene; Groundwater; Environmental science; Adsorption; Ecology; Bacteria; Biology; Organic chemistry; Geology","score_opus":0.002824632916382655,"score_gpt":0.197206903062732,"score_spread":0.19438227014634935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3114690628","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99849087,0.00010202863,0.000032530308,0.00016217279,0.00037819153,0.00023629225,0.00008873309,0.000028434175,0.00048072066],"genre_scores_gemma":[0.99840385,0.000050575294,0.00040238834,0.00016453574,0.00003541874,0.0000020659363,0.0001094804,0.000032157743,0.00079953537],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99823695,0.0002783586,0.00046335428,0.0004157476,0.0003092946,0.00029630095],"domain_scores_gemma":[0.9989301,0.00018485745,0.00023455595,0.0005348475,0.000022454264,0.00009315928],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00036122656,0.00023665465,0.0003211391,0.000027036343,0.00011539512,0.00004601613,0.00039711545,0.00015270193,0.002648521],"category_scores_gemma":[0.00005745956,0.00016054176,0.00011891857,0.00027066408,0.00020189841,0.000108199645,0.00019494661,0.00014659503,0.0004754427],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014946455,0.00011677177,0.0036776306,0.0000082194865,0.000035537025,0.000012912972,0.00021513665,0.000014904063,0.9922078,0.000004714926,0.00054597505,0.003010909],"study_design_scores_gemma":[0.0007976104,0.0007056176,0.017579112,0.000023002729,0.00003958533,0.000006937136,0.00007419668,0.000018745453,0.97897744,0.0000726302,0.0015230076,0.0001821082],"about_ca_topic_score_codex":0.000506062,"about_ca_topic_score_gemma":0.00043526175,"teacher_disagreement_score":0.013901482,"about_ca_system_score_codex":0.00013335976,"about_ca_system_score_gemma":0.0000236607,"threshold_uncertainty_score":0.9982632},"labels":[],"label_agreement":null},{"id":"W3116287004","doi":"10.1016/j.colsurfa.2020.126051","title":"Injectable cationic traps and sticky bacterial emulsifiers: A safe alliance during diesel bioremediation","year":2020,"lang":"en","type":"article","venue":"Colloids and Surfaces A Physicochemical and Engineering Aspects","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Mohawk College; University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bioremediation; Diesel fuel; Aquifer; Soil water; Zeta potential; Chemistry; Contamination; Environmental chemistry; Environmental engineering; Chemical engineering; Environmental science; Waste management; Groundwater; Geotechnical engineering; Organic chemistry; Geology; Soil science; Ecology; Nanoparticle; Engineering","score_opus":0.006165763898314572,"score_gpt":0.1725417496962203,"score_spread":0.16637598579790572,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3116287004","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99898344,0.000285632,0.000029198201,0.00031196335,0.000055966422,0.00012926424,0.000019779312,0.000045998262,0.00013873985],"genre_scores_gemma":[0.99911404,0.0003704911,0.00031476584,0.000046556674,0.00008802637,0.00000421718,0.000012012509,0.0000104564715,0.00003945653],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992277,0.0000078588755,0.00013729282,0.00030364448,0.00011440881,0.00020909384],"domain_scores_gemma":[0.99967617,0.000032250176,0.000036176465,0.00005246463,0.00000703483,0.00019587683],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004003446,0.00015157838,0.00016637889,0.000009349319,0.000083845705,0.00007515725,0.000051587114,0.00006106324,0.000055466455],"category_scores_gemma":[0.00005250223,0.0001408841,0.000018927103,0.0001630284,0.00008279284,0.00016171134,0.00008893675,0.00009292277,0.000008958518],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033532677,0.000016207123,0.0021640542,0.000060694605,0.00001031109,0.0000011100691,0.00064130663,0.000120440454,0.9964024,0.000020497204,0.000119222306,0.0004102244],"study_design_scores_gemma":[0.0032808455,0.00029489142,0.25378156,0.00015932159,0.00008082359,0.0000122412275,0.00035199313,0.05139411,0.68479425,0.00015638789,0.004465409,0.0012281428],"about_ca_topic_score_codex":0.000025244746,"about_ca_topic_score_gemma":0.0000066374378,"teacher_disagreement_score":0.31160814,"about_ca_system_score_codex":0.000027336473,"about_ca_system_score_gemma":0.000006203783,"threshold_uncertainty_score":0.5745087},"labels":[],"label_agreement":null},{"id":"W3117500247","doi":"10.1101/2020.12.18.423565","title":"Long term survival of <i>Dehalococcoides mccartyi</i> strains in mixed cultures under electron acceptor and ammonium limitation","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Strategic Environmental Research and Development Program; University of Toronto; Ontario Genomics Institute; Government of Ontario; Ontario Genomics; Genome Canada; Government of Canada; U.S. Department of Defense","keywords":"Dehalococcoides; Ammonium chloride; Biology; Incubation; Strain (injury); Gene; Virulence; Microbiology; Horizontal gene transfer; Ammonium; Mutant; Operon; Vinyl chloride; Genetics; Chemistry; Biochemistry; Genome; Organic chemistry","score_opus":0.016561395153357618,"score_gpt":0.22852126152558752,"score_spread":0.2119598663722299,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3117500247","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982054,0.00018241805,0.00009931735,0.0003563111,0.00031468575,0.0005724761,0.00016870911,0.0000838451,0.000016836193],"genre_scores_gemma":[0.9985069,0.00034417506,0.0008227574,0.0001624576,0.00009304902,0.000019635003,0.0000025829308,0.000045136137,0.0000033139834],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977556,0.0001585459,0.0005241806,0.0007866578,0.00037571363,0.00039931925],"domain_scores_gemma":[0.9989613,0.000039765775,0.00038475214,0.0003695236,0.000046290017,0.00019834939],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003548723,0.0003969565,0.000449327,0.000093061826,0.0000636819,0.00010758642,0.0003630512,0.00038408142,0.000114111725],"category_scores_gemma":[0.00009745914,0.00039314537,0.00008731252,0.00039805792,0.0002199322,0.00016588448,0.000423816,0.00047592502,0.000048990583],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027707925,0.00008288026,0.14522757,0.000102136815,0.000027018852,0.0000059757717,0.000041367664,0.000049347935,0.85425335,0.00004648516,0.00013206278,0.000004117931],"study_design_scores_gemma":[0.0002848183,0.000029450077,0.6213535,0.00004705363,0.00002456247,4.6907074e-9,0.000006189882,0.000025996529,0.37784007,0.0000015637664,0.00011103698,0.0002757348],"about_ca_topic_score_codex":0.000113726725,"about_ca_topic_score_gemma":0.00026803234,"teacher_disagreement_score":0.47641325,"about_ca_system_score_codex":0.00025752833,"about_ca_system_score_gemma":0.000105586914,"threshold_uncertainty_score":0.99985206},"labels":[],"label_agreement":null},{"id":"W3119289231","doi":"10.1680/jenes.20.00038","title":"Field-scale biopiles for remediation of sulfolane-contaminated soil","year":2021,"lang":"en","type":"article","venue":"Journal of Environmental Engineering and Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Sulfolane; Environmental science; Environmental remediation; Aeration; Nutrient; Soil water; Environmental chemistry; Soil contamination; Contamination; Chemistry; Soil science; Ecology; Solvent","score_opus":0.0036305728294385264,"score_gpt":0.17863765984312038,"score_spread":0.17500708701368187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3119289231","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987898,0.00008039124,0.0007145796,0.00010410967,0.00018510535,0.00003786319,0.0000101948035,0.0000026040186,0.00007535415],"genre_scores_gemma":[0.9969561,0.0001476933,0.0027501548,0.00004303024,0.000024628353,3.0484463e-7,0.0000014278144,0.0000031276256,0.000073526775],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993242,0.000006275504,0.00022193287,0.00010642308,0.00022440357,0.000116757066],"domain_scores_gemma":[0.99968266,0.000045309283,0.00012264079,0.00006220357,0.000008500283,0.00007868725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031414835,0.00005977494,0.00010513455,0.00003985889,0.000042297383,0.000014009988,0.00010245341,0.000032035645,0.00016130546],"category_scores_gemma":[0.00009568323,0.000051166517,0.00003656045,0.00012288691,0.00011317971,0.00017637365,0.000050716375,0.00005456699,0.0000026757093],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010342686,0.000030730676,0.010414794,0.000006343474,0.0000024808303,0.0000020237226,0.00012840543,0.00046501835,0.9862984,0.0000041316057,0.00007354749,0.0025637848],"study_design_scores_gemma":[0.00035086856,0.00017458186,0.13300112,0.000018903587,0.000010085148,0.000043523138,0.00010932511,0.0028594672,0.8620028,0.00001044111,0.001338063,0.00008081005],"about_ca_topic_score_codex":0.0000034409118,"about_ca_topic_score_gemma":0.0000036136119,"teacher_disagreement_score":0.124295585,"about_ca_system_score_codex":0.0000564164,"about_ca_system_score_gemma":0.000015228368,"threshold_uncertainty_score":0.20865099},"labels":[],"label_agreement":null},{"id":"W3120293134","doi":"10.1111/1751-7915.13727","title":"Enzyme biotechnology development for treating polymers in hydraulic fracturing operations","year":2021,"lang":"en","type":"article","venue":"Microbial Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Carboxymethyl cellulose; Hydraulic fracturing; Pulp and paper industry; Biodegradation; Chemistry; Enzyme; Viscosity; Fossil fuel; Polymer; Biopolymer; Environmental science; Materials science; Waste management; Petroleum engineering; Organic chemistry; Geology; Engineering; Composite material","score_opus":0.00906494574081751,"score_gpt":0.22060726604711614,"score_spread":0.21154232030629863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3120293134","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98544693,0.0001129744,0.002607477,0.010507897,0.00023090444,0.00037514456,0.000027405096,0.00020007437,0.0004911977],"genre_scores_gemma":[0.9737491,0.00007124609,0.024103409,0.0011318837,0.00002963576,0.000025920976,0.00009320505,0.00002343354,0.00077215704],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99830246,0.000036462858,0.00044019925,0.0006031076,0.00008303057,0.0005347243],"domain_scores_gemma":[0.9995316,0.000032618278,0.00007241838,0.00029802366,0.000011641157,0.000053670174],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016003077,0.00021581276,0.0002582317,0.00018758122,0.0002014761,0.00003139508,0.00030461932,0.0006795925,0.0020243358],"category_scores_gemma":[0.00013894106,0.00022189262,0.000062703744,0.0006337285,0.00023068483,0.00009124019,0.0003169914,0.00027549657,0.00035048343],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011860319,0.000094317824,0.0004924627,0.0000059081353,0.000010291737,0.000015342544,0.00016469718,0.00013430203,0.96113306,0.000118816504,0.00043625213,0.037382666],"study_design_scores_gemma":[0.0006143113,0.00003179859,0.0007246175,0.000013210395,0.0000051635234,0.000035807374,0.00011892239,0.00014573176,0.8637296,0.000020160607,0.13432783,0.0002328307],"about_ca_topic_score_codex":0.00022259343,"about_ca_topic_score_gemma":0.0052889385,"teacher_disagreement_score":0.13389157,"about_ca_system_score_codex":0.00033218338,"about_ca_system_score_gemma":0.00008011306,"threshold_uncertainty_score":0.99888796},"labels":[],"label_agreement":null},{"id":"W3121103120","doi":"10.1093/femsec/fiab045","title":"Marine sediments harbor diverse archaea and bacteria with the potential for anaerobic hydrocarbon degradation via fumarate addition","year":2021,"lang":"en","type":"article","venue":"FEMS Microbiology Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Fundamental Research Funds for the Central Universities; National Natural Science Foundation of China; Guangdong University of Petrochemical Technology","keywords":"Archaea; Microorganism; Bacteria; Psychrophile; Environmental chemistry; Hydrocarbon; Biology; Anaerobic bacteria; Deltaproteobacteria; Chemistry; 16S ribosomal RNA; Organic chemistry; Paleontology","score_opus":0.005330185705487335,"score_gpt":0.18380434126844034,"score_spread":0.178474155562953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3121103120","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970556,0.000011353516,0.0003078547,0.001617048,0.00037352482,0.00038535488,0.00015524689,0.000021204625,0.00007280228],"genre_scores_gemma":[0.9945749,0.000042937227,0.0019151655,0.0013750469,0.00005973824,0.000027253996,0.0012748509,0.000012072956,0.00071801804],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989588,0.0001408362,0.00016869573,0.00039211122,0.000034132256,0.0003054282],"domain_scores_gemma":[0.999584,0.000054560638,0.00013461782,0.00014888518,0.000023167926,0.000054723245],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016033008,0.00015419394,0.00016971747,0.000026928037,0.0001971614,0.000017546363,0.00011518333,0.000158095,0.0032841219],"category_scores_gemma":[0.000015230217,0.00010958542,0.000035141915,0.00010509538,0.00035882308,0.00007941395,0.00022016534,0.00010198883,0.00013045936],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012868847,0.000054549284,0.008437941,0.0000035192336,0.000038771133,0.00000989487,0.000050921306,0.000013492025,0.98557985,0.0000094951,0.0042613773,0.0014114861],"study_design_scores_gemma":[0.0042745466,0.0010207936,0.665232,0.00000909401,0.00017007401,0.00035972605,0.0001590088,0.0007003126,0.27849406,0.00016706929,0.0488029,0.0006103747],"about_ca_topic_score_codex":0.00006457709,"about_ca_topic_score_gemma":0.0024556743,"teacher_disagreement_score":0.7070858,"about_ca_system_score_codex":0.00008343419,"about_ca_system_score_gemma":0.00002307295,"threshold_uncertainty_score":0.997627},"labels":[],"label_agreement":null},{"id":"W3121704504","doi":"10.1101/2021.01.23.427911","title":"Anaerobic Benzene Biodegradation Linked to Growth of Highly Specific Bacterial Clades","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Canada; University of Waterloo; Mitacs; University of Alberta; Government of Ontario","keywords":"Biodegradation; Bioremediation; Microcosm; Benzene; Environmental chemistry; Biostimulation; Anoxic waters; Chemistry; Nitrate; Sulfate; Biology; Organic chemistry; Ecology; Contamination","score_opus":0.012991096150922513,"score_gpt":0.1970160345752304,"score_spread":0.1840249384243079,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3121704504","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99650234,0.00009864045,0.00032614774,0.00035889642,0.0016036547,0.0006181406,0.00034179294,0.00013555793,0.000014815488],"genre_scores_gemma":[0.98542225,0.00028708225,0.01367863,0.00018247252,0.0003311614,0.000021884594,0.0000057432626,0.000064336105,0.000006437639],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970456,0.00015536463,0.0007404042,0.001063747,0.000531104,0.00046383103],"domain_scores_gemma":[0.9980628,0.00003239349,0.00048673493,0.00091800216,0.00017226649,0.00032780485],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00042015477,0.0004844174,0.0005629955,0.0001812112,0.000098290446,0.00020325274,0.00065626943,0.00053019077,0.0017449164],"category_scores_gemma":[0.00012619802,0.0005084574,0.00016734152,0.0008334617,0.00014355009,0.00020551875,0.00081850035,0.00037854948,0.0003670722],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003863171,0.00014228324,0.008632439,0.000068810376,0.00003571108,0.0000106982625,0.000020153464,0.000027527214,0.98942363,0.000036362588,0.001559174,0.0000045501147],"study_design_scores_gemma":[0.0002739939,0.000044098622,0.2822329,0.0001105193,0.000028726898,6.2964753e-9,0.000002367754,0.00001598882,0.7136554,3.4731158e-7,0.003189678,0.0004459635],"about_ca_topic_score_codex":0.00021693029,"about_ca_topic_score_gemma":0.0000312715,"teacher_disagreement_score":0.27576828,"about_ca_system_score_codex":0.00042215915,"about_ca_system_score_gemma":0.00015296903,"threshold_uncertainty_score":0.9997367},"labels":[],"label_agreement":null},{"id":"W3122770507","doi":"10.11575/prism/38560","title":"Biodegradation of Aromatic Hydrocarbons by Methanogenic Consortia and Groundwater-Associated Microbial Communities","year":2021,"lang":"en","type":"dissertation","venue":"PRISM (University of Calgary)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Canada","keywords":"Biodegradation; Groundwater; Environmental science; Environmental chemistry; Microbial population biology; Waste management; Chemistry; Ecology; Biology; Bacteria; Engineering","score_opus":0.007633783739096057,"score_gpt":0.18305413246774827,"score_spread":0.1754203487286522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3122770507","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99696416,0.00019007888,0.0002457804,0.000042687396,0.000094182724,0.00016876178,0.000011774747,0.000016272268,0.0022662843],"genre_scores_gemma":[0.9888503,0.00052687095,0.001628306,0.00002123207,0.0000016024828,1.7451312e-7,0.003069694,0.000012219594,0.005889589],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991109,0.00014822338,0.00021276574,0.00017716002,0.00021328697,0.00013770972],"domain_scores_gemma":[0.99928683,0.00004917579,0.00043143946,0.00016255092,0.000011351393,0.00005866973],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014215041,0.00015883219,0.0003373471,0.00007181954,0.000113306996,0.000011288625,0.0002168175,0.00025877124,0.00069974293],"category_scores_gemma":[0.00001588387,0.00019154363,0.00009570346,0.00015173566,0.00024006744,0.000117371455,0.00008827615,0.0001535091,0.0000144588885],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007072831,0.00028376843,0.006384892,0.00009181543,0.00018053058,0.000004541802,0.00674559,6.635552e-8,0.9736078,0.0000056347517,0.0034805397,0.009144129],"study_design_scores_gemma":[0.006121616,0.0007462633,0.32106423,0.0010995736,0.0021712487,0.00001505733,0.01643742,0.004364082,0.63761413,0.0006951155,0.007168122,0.002503165],"about_ca_topic_score_codex":0.008757437,"about_ca_topic_score_gemma":0.0033916675,"teacher_disagreement_score":0.33599365,"about_ca_system_score_codex":0.00008263344,"about_ca_system_score_gemma":0.000035024717,"threshold_uncertainty_score":0.9978433},"labels":[],"label_agreement":null},{"id":"W3127251582","doi":"10.1021/acs.est.0c07221","title":"Biodegradation of Lindane (γ-Hexachlorocyclohexane) To Nontoxic End Products by Sequential Treatment with Three Mixed Anaerobic Microbial Cultures","year":2021,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Ontario; Genome Canada","keywords":"Lindane; Hexachlorocyclohexane; Environmental chemistry; Biodegradation; Reductive dechlorination; Chemistry; Anaerobic bacteria; Enrichment culture; Microbial biodegradation; Pesticide; Microorganism; Biology; Bacteria; Ecology; Organic chemistry","score_opus":0.0065113037118244175,"score_gpt":0.2060582537829794,"score_spread":0.19954695007115497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3127251582","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99705994,0.00010812537,0.00024398931,0.0015196266,0.00015623363,0.00046194938,0.00012282167,0.000059933107,0.0002673658],"genre_scores_gemma":[0.9934988,0.0000895513,0.005557029,0.00011712648,0.000021713797,0.000014932443,0.000079908794,0.000013881788,0.00060708314],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977085,0.000029536654,0.00031032253,0.0009131593,0.00051433773,0.0005241716],"domain_scores_gemma":[0.99917054,0.000008086333,0.0001661496,0.00048525544,0.0000113476235,0.00015861515],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001696935,0.0002720585,0.00025205367,0.00015612335,0.00024942288,0.00003689094,0.0004919421,0.00015224365,0.0015964133],"category_scores_gemma":[0.000023858067,0.00021255152,0.000042612046,0.0014390285,0.001865319,0.00025313086,0.00035289873,0.00011536901,0.00026410818],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003177867,0.00035337682,0.015635367,0.0000019325887,0.000010522569,0.000011792181,0.0001365965,0.00004953771,0.9652264,0.000008793569,0.00046209354,0.018071817],"study_design_scores_gemma":[0.0005432641,0.0005762815,0.011641585,0.000008194262,0.000020644822,0.000055813878,0.00017565704,0.000016428123,0.966427,0.000014414434,0.020262308,0.0002583766],"about_ca_topic_score_codex":0.0001759843,"about_ca_topic_score_gemma":0.0011504631,"teacher_disagreement_score":0.019800214,"about_ca_system_score_codex":0.00082423,"about_ca_system_score_gemma":0.0000709381,"threshold_uncertainty_score":0.9993163},"labels":[],"label_agreement":null},{"id":"W3127457294","doi":"10.82308/15059","title":"Culture-dependent and independent microbial analyses of petroleum hydrocarbon contaminated Arctic soil in a mesocosm system","year":2008,"lang":"en","type":"article","venue":"eScholarship@McGill (McGill)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Mesocosm; Environmental science; Petroleum; Soil contamination; Contamination; Environmental chemistry; Ecology; Soil water; Ecosystem; Soil science; Geology; Chemistry; Biology","score_opus":0.016443497417900226,"score_gpt":0.22088624767581305,"score_spread":0.20444275025791284,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3127457294","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99310595,0.00008878502,2.9211628e-7,0.000013052977,0.00016975796,0.0003735179,0.00019087922,0.000072560615,0.005985188],"genre_scores_gemma":[0.99891496,0.00014218866,0.0001222875,0.00011993102,0.000010829856,0.000012139193,0.000023151666,0.000033394066,0.0006211414],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99700856,0.00033271243,0.00078133465,0.00071747554,0.000648387,0.0005115171],"domain_scores_gemma":[0.9989338,0.000054777476,0.00037588825,0.00034314702,0.0000430486,0.00024933164],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00063216704,0.0003822458,0.0005434952,0.00018143904,0.00031093843,0.00002222121,0.00036240998,0.00029441435,0.00021264685],"category_scores_gemma":[0.00012560762,0.0003451586,0.00013376574,0.00047395038,0.00023573595,0.00037659574,0.00032513836,0.00048890495,0.00016577588],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010120209,0.00021503004,0.014057578,0.00006621214,0.00004818521,0.000099153134,0.000038661405,0.00016554733,0.98405164,0.0002384451,0.0000040398813,0.0009143151],"study_design_scores_gemma":[0.0031554592,0.00023336035,0.08311617,0.0001766471,0.00009187531,0.00031846378,0.00037352962,0.000253835,0.91061944,0.00010070829,0.0008740095,0.0006865306],"about_ca_topic_score_codex":0.0034315863,"about_ca_topic_score_gemma":0.0032256597,"teacher_disagreement_score":0.07343222,"about_ca_system_score_codex":0.0009680816,"about_ca_system_score_gemma":0.0000150503565,"threshold_uncertainty_score":0.99990004},"labels":[],"label_agreement":null},{"id":"W3128699356","doi":"10.1016/j.scitotenv.2021.145441","title":"A rhamnolipid biosurfactant increased bacterial population size but hindered hydrocarbon biodegradation in weathered contaminated soils","year":2021,"lang":"en","type":"article","venue":"The Science of The Total Environment","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Rhamnolipid; Biodegradation; Bioremediation; Environmental chemistry; Population; Biostimulation; Chemistry; Microbial population biology; Soil contamination; Bioavailability; Nutrient; Hydrocarbon; Gammaproteobacteria; Soil water; Food science; Contamination; Biology; Bacteria; 16S ribosomal RNA; Ecology; Organic chemistry; Biochemistry","score_opus":0.007107632283951971,"score_gpt":0.1885385406536025,"score_spread":0.18143090836965053,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3128699356","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99772036,0.000013850827,0.0000031648585,0.0010046244,0.0002949712,0.00036846648,0.00003328993,0.000013205638,0.0005480495],"genre_scores_gemma":[0.9993003,0.00002637899,0.00015311643,0.00005175199,0.000020164698,0.0000048082447,0.000012352163,0.0000089051055,0.00042221925],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99783874,0.00021703815,0.0004178028,0.00041780504,0.0007615166,0.00034710675],"domain_scores_gemma":[0.9990191,0.000067331566,0.0002713513,0.0005519508,0.0000074766594,0.000082794475],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00085793616,0.00017842738,0.00019014282,0.00003174862,0.00022006538,0.0000471894,0.0005253543,0.00007377808,0.0015914198],"category_scores_gemma":[0.0001965667,0.000110258545,0.00008204238,0.0005707022,0.0007899166,0.00023624468,0.0004551837,0.0001292592,0.00009250658],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004298102,0.00012225965,0.0023437496,0.0000023150849,0.0000046446225,0.0000012300686,0.00025214866,0.0016643979,0.99486285,0.000012734726,0.00001586694,0.0006747902],"study_design_scores_gemma":[0.0005302718,0.000031126197,0.46573666,0.000015865913,0.000012648166,0.000008255187,0.00013774705,0.002790462,0.53047985,0.00010472649,0.000023293745,0.00012909052],"about_ca_topic_score_codex":0.0017207859,"about_ca_topic_score_gemma":0.00010452572,"teacher_disagreement_score":0.46438304,"about_ca_system_score_codex":0.00051232293,"about_ca_system_score_gemma":0.00005479451,"threshold_uncertainty_score":0.9993213},"labels":[],"label_agreement":null},{"id":"W3134236875","doi":"10.1101/2021.03.03.433826","title":"Identification of a fully dechlorinated product of chlordecone in soil microcosms and enrichment cultures","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Microcosm; Indene; Acetone; Chemistry; Decomposition; Chromatography; Organic chemistry; Environmental chemistry","score_opus":0.007337306841363225,"score_gpt":0.20802459291644515,"score_spread":0.20068728607508193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3134236875","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99832207,0.0005690469,0.000036765785,0.00010498895,0.0002726604,0.000564905,0.000093640694,0.000030175881,0.0000057761304],"genre_scores_gemma":[0.99847525,0.0006264447,0.0007756757,0.00003315066,0.00002900835,0.000029039185,9.3212657e-7,0.000022619448,0.000007854998],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99788487,0.00008288526,0.0007633702,0.00072376494,0.00030265033,0.000242447],"domain_scores_gemma":[0.99854904,0.000016948641,0.00065282546,0.00056399376,0.00012395057,0.000093250055],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005934911,0.0002742206,0.00042250208,0.000123774,0.000034305744,0.000052979976,0.00029811624,0.00022508873,0.0001337248],"category_scores_gemma":[0.00014209427,0.00027583478,0.0000648486,0.00052561867,0.00018919754,0.00012325168,0.00048587218,0.00024920856,0.000012553385],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022182268,0.00024126252,0.04718061,0.00023913741,0.00002746325,0.000004986476,0.000057349946,0.00006478421,0.952072,0.000008395135,0.000075371856,0.000006410429],"study_design_scores_gemma":[0.0002267531,0.000015427404,0.33724624,0.00009717094,0.000019294532,9.768388e-9,0.000007348852,0.000041486328,0.6620289,5.087798e-7,0.00013435917,0.00018247662],"about_ca_topic_score_codex":0.00025624226,"about_ca_topic_score_gemma":0.00007315965,"teacher_disagreement_score":0.29006562,"about_ca_system_score_codex":0.0001848136,"about_ca_system_score_gemma":0.000108552245,"threshold_uncertainty_score":0.99996936},"labels":[],"label_agreement":null},{"id":"W3137635448","doi":"10.23880/ppej-16000119","title":"Synthetic Microbial Community for the Bioremediation of Petroleum Contamination","year":2017,"lang":"en","type":"article","venue":"Petroleum & Petrochemical Engineering Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Petro-Canada","funders":"","keywords":"Bioremediation; Contamination; Petroleum; Environmental chemistry; Environmental science; Microbial population biology; Biochemical engineering; Waste management; Chemistry; Biology; Ecology; Engineering; Bacteria; Organic chemistry","score_opus":0.011289994880953164,"score_gpt":0.22334747785944598,"score_spread":0.2120574829784928,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3137635448","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97786826,0.000036468227,0.019903352,0.0010932429,0.00066718354,0.00012426726,0.000032326912,0.000025406729,0.00024946762],"genre_scores_gemma":[0.9981154,0.000045899047,0.00139313,0.000055806137,0.0002329605,0.0000065608847,0.00001170483,0.00001912281,0.00011939318],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99878836,0.000041794257,0.00039845123,0.00014628544,0.00031601047,0.00030908952],"domain_scores_gemma":[0.99869406,0.00026943194,0.0004401978,0.00042628843,0.000048217596,0.00012178006],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00093855435,0.00017538898,0.00021568222,0.000049543403,0.00065402105,0.00013369264,0.0008196252,0.00014290556,0.00023641495],"category_scores_gemma":[0.0010220854,0.00013173836,0.0001779381,0.000045986973,0.00020973706,0.00021497098,0.00015943142,0.00068616425,0.000025512205],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053612453,0.00007446346,0.0052440213,0.000020227428,0.00002917697,7.0756016e-7,0.000107468826,0.0021343883,0.9899672,0.000026366299,0.0010899095,0.001252435],"study_design_scores_gemma":[0.0037938047,0.00037400817,0.19852991,0.00015579896,0.00021892038,0.00016850687,0.0002107094,0.09945977,0.6688732,0.00009780743,0.027403075,0.000714499],"about_ca_topic_score_codex":0.00004263642,"about_ca_topic_score_gemma":0.000027306764,"teacher_disagreement_score":0.32109404,"about_ca_system_score_codex":0.00020505411,"about_ca_system_score_gemma":0.000019665473,"threshold_uncertainty_score":0.53721344},"labels":[],"label_agreement":null},{"id":"W3147881248","doi":"10.1007/s10532-021-09931-4","title":"Identity and hydrocarbon degradation activity of enriched microorganisms from natural oil and asphalt seeps in the Kurdistan Region of Iraq (KRI)","year":2021,"lang":"en","type":"article","venue":"Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Windsor","funders":"","keywords":"Biology; Dominance (genetics); Biodegradation; Enrichment culture; Phylotype; Hydrocarbon; Metagenomics; Microbial population biology; Pristane; Bacteria; Ecology; Chemistry; 16S ribosomal RNA; Biochemistry; Gene; Organic chemistry","score_opus":0.014457506595679626,"score_gpt":0.2259395410837463,"score_spread":0.21148203448806668,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3147881248","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988507,0.0002227287,0.00017214977,0.0004533441,0.00006707527,0.00005477942,0.00001940136,0.0000058235346,0.00015396716],"genre_scores_gemma":[0.9990025,0.0003386301,0.0004238966,0.00006449004,0.000009889294,9.30563e-7,0.000087775355,0.000003615222,0.00006824373],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99916375,0.00013467023,0.00019621135,0.0002115014,0.00020944113,0.00008445736],"domain_scores_gemma":[0.9995893,0.000058009202,0.0001759213,0.00013872582,0.000015030844,0.000022992088],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017784457,0.00008566572,0.00012117076,0.00002710767,0.000040489915,0.000024901963,0.00008091705,0.00006811562,0.000037035254],"category_scores_gemma":[0.00006670682,0.00006796853,0.000021057795,0.00027383192,0.00010645968,0.00031609653,0.000060954622,0.00007367453,0.0000024943504],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002360765,0.000055953675,0.041105676,0.00001196574,0.0000042003835,0.0000016371702,0.00040928327,5.221017e-7,0.9351575,0.000057703022,0.000039879043,0.02313209],"study_design_scores_gemma":[0.00035609212,0.000017215758,0.6207401,0.0000106805355,0.000015431362,0.0000047276712,0.00018480918,0.00026983276,0.37789923,0.00032962946,0.0000941408,0.00007808791],"about_ca_topic_score_codex":0.0014159353,"about_ca_topic_score_gemma":0.002800147,"teacher_disagreement_score":0.5796344,"about_ca_system_score_codex":0.00004930515,"about_ca_system_score_gemma":0.0000124999015,"threshold_uncertainty_score":0.27716765},"labels":[],"label_agreement":null},{"id":"W3149289552","doi":"10.3390/catal11040456","title":"Multi-Scale Biosurfactant Production by Bacillus subtilis Using Tuna Fish Waste as Substrate","year":2021,"lang":"en","type":"article","venue":"Catalysts","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Fisheries and Oceans Canada; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; United Nations Development Programme","keywords":"Surfactin; Bacillus subtilis; Food science; Substrate (aquarium); Chemistry; Tuna; Pulp and paper industry; Fish <Actinopterygii>; Biotechnology; Biology; Bacteria; Fishery; Ecology; Engineering","score_opus":0.017849815734575773,"score_gpt":0.23385057213866614,"score_spread":0.21600075640409036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3149289552","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978519,0.00007436788,0.000027729919,0.0004894835,0.0005498686,0.00017792915,0.00012914927,0.00005366518,0.00064589863],"genre_scores_gemma":[0.9952771,0.00006129571,0.0008535256,0.0003006008,0.00005623325,0.0000019710058,0.00027785514,0.000019129458,0.003152308],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984223,0.0000628056,0.00028947642,0.0005818426,0.00030056364,0.00034296326],"domain_scores_gemma":[0.99929065,0.000009566929,0.00012088346,0.0003694445,0.000034021705,0.00017541226],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00019213784,0.00019256868,0.00017720708,0.000023554445,0.00015536686,0.00006319216,0.00016596315,0.000113260015,0.0014993941],"category_scores_gemma":[0.000075879936,0.00018234397,0.00007712509,0.0004447595,0.0001488526,0.00028915357,0.00012690638,0.000120149714,0.00096520304],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000095024525,0.00010023313,0.00919665,0.000008771765,0.000009676355,0.000018950943,0.00022903831,0.000050229606,0.98183835,1.3616258e-7,0.0077390233,0.00079942174],"study_design_scores_gemma":[0.00028194094,0.000014449331,0.008249887,0.000014264279,0.00002063488,0.000051493113,0.0002290176,0.00045968284,0.98458856,0.0000026893028,0.005834764,0.0002526345],"about_ca_topic_score_codex":0.0003446794,"about_ca_topic_score_gemma":0.0009855429,"teacher_disagreement_score":0.0027501762,"about_ca_system_score_codex":0.0002105914,"about_ca_system_score_gemma":0.000043215492,"threshold_uncertainty_score":0.99981266},"labels":[],"label_agreement":null},{"id":"W315116375","doi":"10.1371/journal.pone.0126033","title":"Optimizing Polychlorinated Biphenyl Degradation by Flavonoid-Induced Cells of the Rhizobacterium Rhodococcus erythropolis U23A","year":2015,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Flavonoid; Naringenin; Flavanone; Biochemistry; Chemistry; Inducer; Enzyme; Biology","score_opus":0.04618949722339191,"score_gpt":0.21133465589328637,"score_spread":0.16514515866989446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W315116375","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972483,0.000014546482,0.000013159972,0.00060011086,0.0001909976,0.0002857907,0.00005488697,0.000038686823,0.0015535202],"genre_scores_gemma":[0.9974751,0.000020180818,0.0011369579,0.00019221466,0.000031553624,0.0000035553117,0.000022137145,0.000013853334,0.0011044821],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988348,0.00007480517,0.00022873763,0.00021964555,0.0004159641,0.00022605088],"domain_scores_gemma":[0.9993552,0.000019066782,0.00018860234,0.00028191114,0.000027713706,0.00012753421],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018042997,0.0001317911,0.000164282,0.000022964836,0.000069761685,0.000025408937,0.000286232,0.000085286716,0.0007437692],"category_scores_gemma":[0.00005856651,0.00009780706,0.000043257023,0.00032278665,0.00010747378,0.00018015559,0.0001572243,0.00010530889,0.0002861782],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002076253,0.0003326476,0.004205052,0.00000703749,0.000017962035,2.2269276e-7,0.000281588,0.0000054472885,0.9916628,0.0000021503904,0.0032740547,0.00019026505],"study_design_scores_gemma":[0.00036637046,0.00006201915,0.001969202,0.000023737792,0.000028761575,2.2434732e-7,0.0001006878,0.00014605306,0.9967588,0.000007524228,0.00040429534,0.0001323017],"about_ca_topic_score_codex":0.000507887,"about_ca_topic_score_gemma":0.00007626982,"teacher_disagreement_score":0.0050960123,"about_ca_system_score_codex":0.00016874335,"about_ca_system_score_gemma":0.00002344073,"threshold_uncertainty_score":0.81437516},"labels":[],"label_agreement":null},{"id":"W3151759870","doi":"10.3389/fbioe.2021.635196","title":"Sustainable Remediation of Contaminated Soil Using Biosurfactants","year":2021,"lang":"en","type":"review","venue":"Frontiers in Bioengineering and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Environmental remediation; Environmental science; Sustainability; Waste management; Pollutant; Biodegradation; Biochemical engineering; Contamination; Engineering; Chemistry; Ecology","score_opus":0.012438708427606785,"score_gpt":0.23655885823441417,"score_spread":0.2241201498068074,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3151759870","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007291022,0.9907786,0.00089303456,0.00003086848,0.0005035811,0.00036918488,0.0000341529,0.00006553432,0.000033973858],"genre_scores_gemma":[0.001853526,0.9932779,0.004653475,0.0000059393788,0.00001361134,0.0000038480334,0.00004965447,0.00002585253,0.00011619979],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984474,0.00005440861,0.00054541836,0.00042984943,0.00012565282,0.00039723743],"domain_scores_gemma":[0.9994111,0.000020928783,0.00025694072,0.00024423175,0.000013544405,0.00005323033],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00024419843,0.0003018261,0.0010714498,0.00040536522,0.000034599223,0.000014514337,0.00021683879,0.00094100885,0.00004456686],"category_scores_gemma":[0.00011405827,0.0002734191,0.00009740555,0.0010910345,0.00022933149,0.000069450645,0.00024827314,0.0003358613,0.0000040267814],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007754406,0.000099023775,0.0013374486,0.0048952946,0.00012162136,0.00010946291,0.00008875674,0.00011275749,0.006822571,0.00008219256,0.0011135578,0.9852096],"study_design_scores_gemma":[0.00053861435,0.000094205745,0.000080084355,0.0031588536,0.00022387833,0.00007298956,0.00042420113,0.0025098547,0.0060462723,0.000020171829,0.985976,0.00085488986],"about_ca_topic_score_codex":0.0001498888,"about_ca_topic_score_gemma":0.000015990618,"teacher_disagreement_score":0.98486245,"about_ca_system_score_codex":0.00032692932,"about_ca_system_score_gemma":0.000049642633,"threshold_uncertainty_score":0.9999718},"labels":[],"label_agreement":null},{"id":"W3153607817","doi":"10.1016/j.jhazmat.2021.125919","title":"Crude oil biodegradation in upper and supratidal seashores","year":2021,"lang":"en","type":"article","venue":"Journal of Hazardous Materials","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Fisheries and Oceans Canada; McGill University; National Research Council Canada","funders":"Fisheries and Oceans Canada","keywords":"Biodegradation; Environmental science; Crude oil; Environmental chemistry; Chemistry; Environmental engineering; Geology; Petroleum engineering; Organic chemistry","score_opus":0.0057358705885858195,"score_gpt":0.20896255283707993,"score_spread":0.2032266822484941,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3153607817","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980618,0.00007855816,0.0000041377652,0.0010217685,0.0003264635,0.000018729499,0.000016479753,0.000003054008,0.00046905698],"genre_scores_gemma":[0.99819773,0.00031701228,0.0008785059,0.00023726924,0.00007117556,2.5917404e-7,0.000005050498,0.000004757942,0.00028825298],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991736,0.00009770671,0.00034234227,0.00009433571,0.00017992631,0.00011212677],"domain_scores_gemma":[0.9996792,0.0000176469,0.0001649021,0.000060552247,0.00001986472,0.00005784308],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00037730215,0.0000701097,0.00016373943,0.00003422925,0.000025732816,0.000078414596,0.00006596724,0.000049970655,0.0036631438],"category_scores_gemma":[0.00008451854,0.000054010874,0.000024172086,0.00008391347,0.000043069653,0.00018788509,0.00007255203,0.000048092137,0.000061470084],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003317047,0.000038031227,0.02173466,0.0000068299073,0.000004270886,0.000047938243,0.00012500412,0.0000043347877,0.9731089,0.0000085737665,0.0017243021,0.0031639927],"study_design_scores_gemma":[0.0004433079,0.000037184484,0.11948102,0.000026350172,0.000007570837,0.00015449285,0.00008353078,0.0000027256606,0.8750413,0.00008922899,0.004552005,0.00008126181],"about_ca_topic_score_codex":0.000031029107,"about_ca_topic_score_gemma":0.00012229444,"teacher_disagreement_score":0.09806757,"about_ca_system_score_codex":0.000053452797,"about_ca_system_score_gemma":0.000027557715,"threshold_uncertainty_score":0.99724764},"labels":[],"label_agreement":null},{"id":"W3157761271","doi":"10.3389/fmicb.2021.633659","title":"Harnessing the Potential of Native Microbial Communities for Bioremediation of Oil Spills in the Iberian Peninsula NW Coast","year":2021,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"European Regional Development Fund; Executive Agency for Small and Medium-sized Enterprises; Fundação para a Ciência e a Tecnologia; Ministério da Ciência, Tecnologia e Ensino Superior; European Commission","keywords":"Bioremediation; Environmental remediation; Microcosm; Microbial population biology; Microbial ecology; Environmental science; Ecology; Biology; Contamination; Bacteria","score_opus":0.00957361963707477,"score_gpt":0.2184391325940883,"score_spread":0.20886551295701353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3157761271","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99707085,0.00016847278,0.0005603247,0.00083171437,0.00076362916,0.00019828847,0.00026014098,0.0000034374045,0.00014311817],"genre_scores_gemma":[0.9962237,0.00012791305,0.002907101,0.00037675104,0.00003053188,0.0000073927968,0.0002452703,0.000007213059,0.00007411154],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986535,0.00045829962,0.0004185593,0.00016067982,0.000064533735,0.0002444853],"domain_scores_gemma":[0.9993742,0.000116329546,0.0002477797,0.0002112575,0.000036965244,0.000013438741],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00069584127,0.00012069381,0.00025570078,0.00006628351,0.0000910623,0.000012932387,0.00040235955,0.00013036125,0.00013655778],"category_scores_gemma":[0.00007881209,0.00008140337,0.000078057696,0.0003134388,0.0006911759,0.00006509933,0.00014417946,0.00015937169,0.0000032401645],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000078556375,0.00010452715,0.03237748,0.00001803255,0.000012498676,0.0000016545829,0.004452194,0.000094389135,0.9558541,0.000015019664,0.00519204,0.0017994664],"study_design_scores_gemma":[0.0037072503,0.0001795622,0.07321995,0.000115349554,0.000054982083,0.000051185656,0.033701688,0.0006437228,0.871056,0.00037058242,0.016484724,0.00041496984],"about_ca_topic_score_codex":0.0003338464,"about_ca_topic_score_gemma":0.002300618,"teacher_disagreement_score":0.084798105,"about_ca_system_score_codex":0.00007838141,"about_ca_system_score_gemma":0.000046357567,"threshold_uncertainty_score":0.3319533},"labels":[],"label_agreement":null},{"id":"W3159248911","doi":"10.1016/j.chemosphere.2021.130635","title":"Application of an indigenous microorganisms-based fixed-bed GAC-biofilm reactor for passive and sustainable treatment of oil sands process water through combined adsorption and biodegradation processes","year":2021,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canada First Research Excellence Fund; Alberta Innovates; China Scholarship Council; Natural Sciences and Engineering Research Council of Canada; Imperial Oil Limited; Syncrude; Alberta Environment and Parks; Suncor Energy Incorporated; Canadian Natural Resources Limited","keywords":"Biofilter; Biodegradation; Bioremediation; Microorganism; Microbial population biology; Biofilm; Pulp and paper industry; Environmental chemistry; Environmental remediation; Chemistry; Bioreactor; Microbiology; Waste management; Environmental engineering; Bacteria; Contamination; Environmental science; Biology; Ecology; Organic chemistry","score_opus":0.006405074903431761,"score_gpt":0.23107262844527754,"score_spread":0.22466755354184578,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3159248911","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990541,0.000085708496,0.00023716297,0.00014475592,0.000010903873,0.00035258598,0.000052198637,0.000015259087,0.00004734167],"genre_scores_gemma":[0.99720806,0.00009254553,0.0018598132,0.000045415345,0.0000091644815,0.000036625548,0.0005395887,0.000010677704,0.00019809275],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99924487,0.000016042692,0.0001971009,0.00027373803,0.00009783446,0.00017039951],"domain_scores_gemma":[0.99955124,0.000019399533,0.00014375222,0.00012855534,0.00011283295,0.00004421883],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000055253568,0.00012279263,0.00017108086,0.0000062180816,0.00006533693,0.000020859954,0.000050195096,0.000092427705,0.00012105412],"category_scores_gemma":[0.00001989361,0.00009216545,0.000019189272,0.00014779723,0.00010066329,0.00018788376,0.000019330177,0.00001901188,0.0000017590339],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001331882,0.0003782022,0.00774956,0.00045207518,0.000010216805,6.129432e-7,0.0024711385,0.0000052100254,0.9807464,0.0000033456038,0.000016914559,0.008033177],"study_design_scores_gemma":[0.0013122215,0.00032526103,0.0025193621,0.000011929472,0.00003152637,0.0000019161475,0.0014319419,0.00011829872,0.9934306,0.00011950896,0.0005842431,0.00011319759],"about_ca_topic_score_codex":0.00016129563,"about_ca_topic_score_gemma":0.00012407731,"teacher_disagreement_score":0.0126842335,"about_ca_system_score_codex":0.00008188561,"about_ca_system_score_gemma":0.000060969007,"threshold_uncertainty_score":0.3758398},"labels":[],"label_agreement":null},{"id":"W3162705763","doi":"10.1515/cppm-2020-0118","title":"Kinetic modeling of biosurfactant production by <i>Bacillus subtilis</i> N3-1P using brewery waste","year":2021,"lang":"en","type":"article","venue":"Chemical Product and Process Modeling","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Petroleum Research Newfoundland and Labrador","keywords":"Bacillus subtilis; Bioprocess; Biomass (ecology); Substrate (aquarium); Industrial and production engineering; Pulp and paper industry; Design–Expert; Production (economics); Batch production; Environmental science; Food science; Biochemical engineering; Chemistry; Mathematics; Biotechnology; Waste management; Response surface methodology; Engineering; Bacteria; Chromatography; Biology; Chemical engineering; Mechanical engineering","score_opus":0.019589256976069086,"score_gpt":0.2290683430808189,"score_spread":0.2094790861047498,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3162705763","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99617857,0.001155777,0.0017378569,0.00032529683,0.00017056067,0.00018001776,0.000017046621,0.000037067264,0.00019783531],"genre_scores_gemma":[0.998057,0.00022760103,0.0013880413,0.00008725518,0.00011895221,0.0000022380887,0.000040967825,0.00002234187,0.00005556599],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981078,0.000029179517,0.00046752064,0.00072881905,0.00034480574,0.00032186907],"domain_scores_gemma":[0.99938965,0.000009070578,0.00011837019,0.00024947937,0.00011068818,0.00012275217],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026617508,0.00022065906,0.0002709674,0.000025355841,0.00010032697,0.00003516389,0.00014022281,0.000103579936,0.00012077726],"category_scores_gemma":[0.0001827926,0.00020180615,0.00005120072,0.000371478,0.00012356357,0.00027872433,0.0001416771,0.00018681803,0.000006609865],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033451906,0.00007202972,0.00043656194,0.00013143207,0.0000077397035,9.630763e-7,0.00028421392,0.08550678,0.91219234,6.4516985e-7,0.00008179759,0.0012520157],"study_design_scores_gemma":[0.0001333337,0.0000064502533,7.82868e-7,0.000044692395,0.000019935098,0.000011896784,0.000120089986,0.39265037,0.60669976,0.00011023621,0.000031489668,0.00017094631],"about_ca_topic_score_codex":0.00005527594,"about_ca_topic_score_gemma":0.0000036704698,"teacher_disagreement_score":0.3071436,"about_ca_system_score_codex":0.00005964515,"about_ca_system_score_gemma":0.000044583056,"threshold_uncertainty_score":0.8229416},"labels":[],"label_agreement":null},{"id":"W3164386292","doi":"10.1016/j.jhazmat.2021.126122","title":"A cross-comparison of biosurfactants as marine oil spill dispersants: Governing factors, synergetic effects and fates","year":2021,"lang":"en","type":"article","venue":"Journal of Hazardous Materials","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":66,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; Fisheries and Oceans Canada; McGill University; Memorial University of Newfoundland","funders":"Fisheries and Oceans Canada","keywords":"Dispersant; Trehalose; Oil spill; Biodegradation; Dispersion (optics); Chemistry; Environmentally friendly; Petroleum; Pulp and paper industry; Chemical engineering; Environmental science; Organic chemistry; Environmental engineering; Biology","score_opus":0.007599682902565859,"score_gpt":0.26051907470552943,"score_spread":0.2529193918029636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3164386292","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99834716,0.00019431172,0.0000030775027,0.00008294582,0.00077791343,0.0000465697,0.00005406758,0.000008818649,0.0004851315],"genre_scores_gemma":[0.99882084,0.00035225868,0.0004087796,0.00005548532,0.00005980454,2.8943543e-7,0.000009412105,0.000015798249,0.0002773064],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99823195,0.00012692786,0.00077029545,0.00019861992,0.00042832227,0.00024387555],"domain_scores_gemma":[0.99874824,0.000108984554,0.00079666014,0.00014245017,0.000058274487,0.00014538158],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003861982,0.00019480176,0.0005770748,0.000039594714,0.000072571456,0.00012659004,0.0001484396,0.00010397037,0.005592605],"category_scores_gemma":[0.00048782746,0.00014386307,0.00008712506,0.00012904167,0.00015147141,0.00020735445,0.000232105,0.000097979566,0.00008324166],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000746947,0.00009007719,0.22632815,0.00008103415,0.000035360474,0.00005987418,0.00026483566,0.000012478229,0.77171224,0.0000026242712,0.00016225592,0.00117637],"study_design_scores_gemma":[0.00052768446,0.00015607898,0.22809105,0.00008668829,0.000036376598,0.00007403362,0.00009568633,0.0000045114366,0.7701255,0.00002305563,0.00065031473,0.00012902226],"about_ca_topic_score_codex":0.00013073812,"about_ca_topic_score_gemma":0.000030674684,"teacher_disagreement_score":0.0055093635,"about_ca_system_score_codex":0.00008879974,"about_ca_system_score_gemma":0.00003599065,"threshold_uncertainty_score":0.99531645},"labels":[],"label_agreement":null},{"id":"W3165015294","doi":"10.1021/acs.est.1c00508","title":"Anaerobic Benzene Biodegradation Linked to the Growth of Highly Specific Bacterial Clades","year":2021,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":69,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Research, Innovation and Science; Genome Canada","keywords":"Bioremediation; Microcosm; Biodegradation; Benzene; Environmental chemistry; Anoxic waters; Biostimulation; Chemistry; Biology; Ecology; Organic chemistry; Contamination","score_opus":0.007291811491116675,"score_gpt":0.19529485926604365,"score_spread":0.18800304777492696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3165015294","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939904,0.000040205665,0.00012341017,0.004764592,0.0003062758,0.00021608835,0.000035400066,0.000042386262,0.00048123527],"genre_scores_gemma":[0.99667996,0.00012010442,0.0026766115,0.00027356355,0.000036029236,0.000005900979,0.000020650521,0.000007710958,0.0001794709],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998332,0.000035892033,0.00028500272,0.000531028,0.00044716572,0.00036889547],"domain_scores_gemma":[0.99931794,0.00001577794,0.000118465985,0.00044197313,0.0000070897254,0.000098743854],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00030386596,0.00014522445,0.00014678632,0.00014489969,0.0002601812,0.00003533919,0.0007508831,0.00011739722,0.0032400289],"category_scores_gemma":[0.00005382865,0.00010957085,0.00004349696,0.0016978187,0.0015439824,0.00020523068,0.00066484977,0.00013198389,0.0010099025],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007917033,0.0000795813,0.0109462775,6.7976447e-7,0.0000020928624,0.0000028821978,0.00009504475,0.000014636028,0.9817518,0.00021438068,0.00068757706,0.006197114],"study_design_scores_gemma":[0.00016519151,0.0000856297,0.13457032,0.000003887789,0.000004266949,0.0000119138485,0.00017866601,0.000012170304,0.8388175,0.00012398613,0.02589617,0.00013035384],"about_ca_topic_score_codex":0.000028512484,"about_ca_topic_score_gemma":0.00007440536,"teacher_disagreement_score":0.14293437,"about_ca_system_score_codex":0.00030181927,"about_ca_system_score_gemma":0.000024564828,"threshold_uncertainty_score":0.9997679},"labels":[],"label_agreement":null},{"id":"W3165788630","doi":"10.1007/s10532-021-09952-z","title":"Efficiencies of selected biotreatments for the remediation of PAH in diluted bitumen contaminated soil microcosms","year":2021,"lang":"en","type":"article","venue":"Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; Université Laval; Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bioaugmentation; Biostimulation; Environmental remediation; Microcosm; Ecotoxicity; Environmental chemistry; Amendment; Soil contamination; Environmental science; Contamination; Total petroleum hydrocarbon; Bioremediation; Phytoremediation; Ecotoxicology; Chemistry; Pulp and paper industry; Soil water; Heavy metals; Soil science; Biology","score_opus":0.010723077507113956,"score_gpt":0.21800944730974806,"score_spread":0.2072863698026341,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3165788630","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985519,0.00006539163,0.0005064718,0.0002602342,0.00008416874,0.0003675349,0.00009887201,0.000010122331,0.000055293654],"genre_scores_gemma":[0.998713,0.00007304682,0.0006950105,0.000033660606,0.000007981437,0.000008791501,0.00032614337,0.0000044092512,0.00013791051],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992116,0.000053189295,0.00029165816,0.00016080737,0.0001626883,0.000120070676],"domain_scores_gemma":[0.99948364,0.000106434694,0.00019776092,0.00012330466,0.000070346665,0.000018504192],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020198271,0.000079228725,0.000119084645,0.000039895036,0.000040961484,0.000008268202,0.00009353561,0.00006211873,0.00012137194],"category_scores_gemma":[0.0001633588,0.000056800873,0.000033442448,0.000692038,0.00008213016,0.00007461328,0.000029676294,0.000029484536,0.000009122],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003010784,0.00013926481,0.04882889,0.000009442252,0.000009434251,2.2174e-7,0.00025877368,0.000044303833,0.94522804,0.000011271434,0.00039239007,0.005047835],"study_design_scores_gemma":[0.00061017775,0.000044405282,0.25402066,0.000010216949,0.000013313802,4.708921e-7,0.000104978186,0.0011647808,0.74343324,0.000011294407,0.0005354696,0.000051010513],"about_ca_topic_score_codex":0.00034250223,"about_ca_topic_score_gemma":0.0011449906,"teacher_disagreement_score":0.20519176,"about_ca_system_score_codex":0.00009555648,"about_ca_system_score_gemma":0.000039246635,"threshold_uncertainty_score":0.23162724},"labels":[],"label_agreement":null},{"id":"W3167700600","doi":"10.1016/j.biortech.2021.125404","title":"Access-dispersion-recovery strategy for enhanced mitigation of heavy crude oil pollution using magnetic nanoparticles decorated bacteria","year":2021,"lang":"en","type":"article","venue":"Bioresource Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Fisheries and Oceans Canada; Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Fisheries and Oceans Canada; Canada Foundation for Innovation; Dairy Farmers of Ontario","keywords":"Bioremediation; Magnetic nanoparticles; Pollution; Dispersion (optics); Bacteria; Degradation (telecommunications); Chemistry; Magnetic separation; Enhanced oil recovery; Rhodococcus; Nanoparticle; Environmental pollution; Environmental chemistry; Chemical engineering; Environmental science; Materials science; Nanotechnology; Metallurgy; Biology; Environmental protection; Ecology","score_opus":0.01957320857398009,"score_gpt":0.2609637676146518,"score_spread":0.2413905590406717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3167700600","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99861634,0.00012226858,0.00026427646,0.00048483952,0.0001064456,0.00012841061,0.00006507075,0.00007833253,0.0001339994],"genre_scores_gemma":[0.99678725,0.000053341675,0.0028325196,0.00010455007,0.000017455555,0.0000065836857,0.00004107556,0.000012382037,0.00014485631],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989355,0.00004037796,0.0003133584,0.000321732,0.00012058635,0.00026844538],"domain_scores_gemma":[0.9994841,0.000020720845,0.00017580847,0.00021997304,0.000045840574,0.00005355406],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009750234,0.00013072824,0.00017736744,0.000093620074,0.00009582768,0.0000321812,0.0002097309,0.00023107331,0.0011520297],"category_scores_gemma":[0.0001096737,0.00012819744,0.000056422818,0.0006720109,0.00026183252,0.00013327223,0.0001511276,0.000061825216,0.000042742304],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058149,0.00007223678,0.0038149336,0.000014341776,0.000006205972,0.0000013363829,0.00002741466,0.00018410079,0.9667184,0.000014308197,0.00011029627,0.028978318],"study_design_scores_gemma":[0.0004475207,0.00013559776,0.0145440325,0.000024670853,0.000019270878,0.000007068755,0.00016673679,0.00045742522,0.98290557,0.00016733227,0.0009794119,0.00014536068],"about_ca_topic_score_codex":0.000040337545,"about_ca_topic_score_gemma":0.0001705404,"teacher_disagreement_score":0.028832959,"about_ca_system_score_codex":0.00011739602,"about_ca_system_score_gemma":0.000044965433,"threshold_uncertainty_score":0.99976104},"labels":[],"label_agreement":null},{"id":"W3170936754","doi":"10.1101/2021.06.10.447808","title":"CANT-HYD: A curated database of phylogeny-derived Hidden Markov Models for annotation of marker genes involved in hydrocarbon degradation","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Canada First Research Excellence Fund; Government of Alberta; Genome Canada","keywords":"Metagenomics; Gene; Computational biology; Hydrocarbon; Biology; Identification (biology); Genetics; Chemistry; Ecology; Organic chemistry","score_opus":0.019875441672439695,"score_gpt":0.21803889796850096,"score_spread":0.19816345629606125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3170936754","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953121,0.00035973883,0.0019005792,0.000045716955,0.0003055167,0.0011071486,0.0009210072,0.000041502943,0.0000066840907],"genre_scores_gemma":[0.9849055,0.00048641034,0.014350152,0.00005575475,0.00003709012,0.000081440085,0.000029557152,0.000051463157,0.000002665548],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997406,0.00019188567,0.00085737015,0.00079347496,0.00040337883,0.00034787896],"domain_scores_gemma":[0.99812067,0.0000632149,0.0008085469,0.000684153,0.0001994134,0.00012399192],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006356741,0.00037824255,0.0005508232,0.00019426605,0.0000445172,0.00004303,0.0003843887,0.000370851,0.00012631006],"category_scores_gemma":[0.00015299713,0.00040894968,0.00012289998,0.0006446519,0.00014376717,0.0003005068,0.00038037944,0.00022303507,0.0000040182363],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012783428,0.00017841536,0.024458831,0.00033452694,0.00004709483,0.0000051823577,0.0000380764,0.00050316163,0.97422254,0.00000956623,0.000055780158,0.000019007311],"study_design_scores_gemma":[0.0007719475,0.000035721954,0.11396318,0.0002976543,0.00006187787,5.7287632e-9,0.000017438897,0.025310965,0.8590952,0.0000022083225,0.00003171765,0.00041207785],"about_ca_topic_score_codex":0.001394181,"about_ca_topic_score_gemma":0.0005064042,"teacher_disagreement_score":0.11512732,"about_ca_system_score_codex":0.0003074424,"about_ca_system_score_gemma":0.00028753837,"threshold_uncertainty_score":0.9998362},"labels":[],"label_agreement":null},{"id":"W3173016506","doi":"10.1093/femsec/fiab082","title":"<i>In situ</i>microcosms deployed at the coast of British Columbia (Canada) to study dilbit weathering and associated microbial communities under marine conditions","year":2021,"lang":"en","type":"article","venue":"FEMS Microbiology Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University; Fisheries and Oceans Canada; Bedford Institute of Oceanography; National Research Council Canada","funders":"","keywords":"Microcosm; AlkB; Biodegradation; Biology; Extreme environment; Metagenomics; Environmental chemistry; Ecology; Incubation; Bacteria; Gene; Paleontology; Chemistry","score_opus":0.007174529664317629,"score_gpt":0.19776169777783517,"score_spread":0.19058716811351753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3173016506","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99764895,0.000018988709,9.961191e-7,0.000751342,0.00029071345,0.0004738471,0.0006352191,0.00001410462,0.00016584448],"genre_scores_gemma":[0.994639,0.000026778423,0.000041671974,0.003263607,0.000010789098,0.00001708402,0.00024330242,0.00001546116,0.0017423303],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984102,0.00045561226,0.0003948445,0.00030357167,0.0000535295,0.0003822333],"domain_scores_gemma":[0.9993006,0.00022973238,0.0001438796,0.00022536251,0.0000342682,0.000066130175],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002849832,0.00013380093,0.00035401565,0.000020667265,0.00026975994,0.00002995121,0.00024685517,0.0001545695,0.0049328413],"category_scores_gemma":[0.00004189844,0.00016497828,0.000037832568,0.00024017743,0.00041869906,0.000039794388,0.0010394613,0.00020901978,0.000032887492],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009979609,0.0001998364,0.41546074,0.0000015178767,0.000037433954,0.00002636584,0.00029142972,0.000014302407,0.5602668,3.4482792e-7,0.023643347,0.000047924786],"study_design_scores_gemma":[0.0012792759,0.00014684134,0.9743105,0.000008537896,0.000026717042,0.00020679129,0.0023809958,0.0000011042207,0.01775788,0.00002096446,0.003658128,0.00020226915],"about_ca_topic_score_codex":0.43393743,"about_ca_topic_score_gemma":0.9995311,"teacher_disagreement_score":0.5655936,"about_ca_system_score_codex":0.00033805185,"about_ca_system_score_gemma":0.00008264542,"threshold_uncertainty_score":0.9959768},"labels":[],"label_agreement":null},{"id":"W3173764604","doi":"10.1016/j.envpol.2021.117678","title":"Sustainable production and co-immobilization of cold-active enzymes from Pseudomonas sp. for BTEX biodegradation","year":2021,"lang":"en","type":"article","venue":"Environmental Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":52,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; York University","funders":"","keywords":"Biodegradation; BTEX; Pseudomonas; Chemistry; Environmental chemistry; Enzyme; Bioremediation; Environmental science; Contamination; Benzene; Bacteria; Biochemistry; Organic chemistry; Biology; Ethylbenzene; Ecology","score_opus":0.007681489417240261,"score_gpt":0.21079867805778832,"score_spread":0.20311718864054806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3173764604","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975994,0.00013886816,0.00078427786,0.00033412958,0.00011814376,0.00050074403,0.0002950193,0.000017192397,0.00021218344],"genre_scores_gemma":[0.99661255,0.00017041349,0.0009316469,0.00008233782,0.000046062498,0.0000136876015,0.00056033663,0.000010644302,0.0015723269],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99902725,0.00005576612,0.00021300114,0.00034743157,0.00019024969,0.0001662996],"domain_scores_gemma":[0.99963766,0.000019077552,0.00015070893,0.00013447228,0.0000066060984,0.00005144257],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000121601544,0.00011670342,0.000120036304,0.000027035017,0.00013632799,0.000016432414,0.000045044933,0.000083585895,0.0007667754],"category_scores_gemma":[0.000061669394,0.00012052676,0.000038647417,0.00011232044,0.00018048951,0.00034416516,0.000056593184,0.0000421247,0.000039199735],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006592143,0.00014870825,0.014252995,0.0000100821635,0.000011175382,7.320914e-7,0.0003072467,0.00007989629,0.98166656,0.00013520662,0.0010697432,0.0022517268],"study_design_scores_gemma":[0.00036365996,0.000060145856,0.13833812,0.0000072210923,0.000021416172,0.0000022533618,0.0011709952,0.00014119707,0.854597,0.00016931439,0.005008077,0.000120636054],"about_ca_topic_score_codex":0.00016205397,"about_ca_topic_score_gemma":0.00006249738,"teacher_disagreement_score":0.12706959,"about_ca_system_score_codex":0.0002905781,"about_ca_system_score_gemma":0.000012500357,"threshold_uncertainty_score":0.8395653},"labels":[],"label_agreement":null},{"id":"W3174722956","doi":"10.21203/rs.3.rs-167048/v1","title":"Biodegradation of p-xylene – A comparison for three Cold-active Pseudomonas strains","year":2021,"lang":"en","type":"preprint","venue":"Research Square","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; York University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biodegradation; Pseudomonas putida; Dioxygenase; Chemistry; Pseudomonas; Xylene; Biochemistry; Benzene; Metabolism; Toluene; Biotransformation; Enzyme; Biology; Bacteria; Organic chemistry; Genetics","score_opus":0.10235510509190182,"score_gpt":0.38757717127511937,"score_spread":0.28522206618321755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3174722956","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99277425,0.000120441924,0.001707461,0.00049687875,0.00019590624,0.0020281426,0.0010326967,0.00002738562,0.0016168148],"genre_scores_gemma":[0.996537,0.00008367513,0.002193337,0.000014000085,0.00006191485,0.000083011866,0.00074039603,0.000019841002,0.0002668112],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99738294,0.00020955951,0.0004029483,0.00058826833,0.0009884853,0.00042777712],"domain_scores_gemma":[0.9987903,0.00017215285,0.00021915157,0.00045653665,0.00022063333,0.00014119857],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009044274,0.00019105065,0.00036117109,0.000111000976,0.00013772552,0.00008257627,0.00042441045,0.0003184434,0.0023526521],"category_scores_gemma":[0.0002892154,0.00017905704,0.00017180959,0.00037683328,0.00031125077,0.00009452582,0.0008364362,0.00053692143,0.00009027154],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020302676,0.0008377823,0.03939601,0.00070506555,0.0000942605,0.000006427777,0.0015113181,0.0007899466,0.9209738,0.00024375886,0.010468557,0.024770098],"study_design_scores_gemma":[0.0010849717,0.0005110388,0.22958201,0.0004803413,0.000032395616,7.1764447e-7,0.0018159342,0.0074192663,0.750931,0.00062738435,0.0069739227,0.00054101535],"about_ca_topic_score_codex":0.0009723661,"about_ca_topic_score_gemma":0.0035898264,"teacher_disagreement_score":0.190186,"about_ca_system_score_codex":0.00042730637,"about_ca_system_score_gemma":0.00019421453,"threshold_uncertainty_score":0.99855936},"labels":[],"label_agreement":null},{"id":"W3177224439","doi":"10.1002/cjce.24240","title":"Production of surfactin by <scp> <i>Bacillus subtilis</i> LAMI005 </scp> and evaluation of its potential as tensoactive and emulsifier","year":2021,"lang":"en","type":"article","venue":"The Canadian Journal of Chemical Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Agência Nacional do Petróleo, Gás Natural e Biocombustíveis; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Surfactin; Chemistry; Bacillus subtilis; Lipopeptide; Emulsion; Food science; Rhamnolipid; Pulmonary surfactant; Mineral oil; Bacteria; Biochemistry; Organic chemistry; Biology","score_opus":0.008054419243912595,"score_gpt":0.19153966098256694,"score_spread":0.18348524173865435,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3177224439","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99899393,0.0004222105,0.000006157082,0.00027660775,0.00012173409,0.00006392172,0.000011070597,0.0000013884666,0.0001029858],"genre_scores_gemma":[0.9997894,0.000031112468,0.00007162818,0.000021405873,0.000029446752,2.5049218e-7,0.0000024356261,0.000005276994,0.000049053535],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993176,0.000030524152,0.00019803348,0.00008712053,0.00025192573,0.00011481955],"domain_scores_gemma":[0.99952644,0.000035734854,0.00012607402,0.000058967933,0.00010485698,0.00014795411],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039406694,0.00006767477,0.000117582764,0.000024906996,0.000026959602,0.000012743737,0.000061012826,0.00005289616,0.00008683777],"category_scores_gemma":[0.00058593095,0.00005413844,0.00002653946,0.000116897056,0.00008794509,0.000099987665,0.000016894423,0.0001255478,0.0000013351658],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000029158566,0.00000588047,0.0005265151,0.00000942849,0.000016134369,0.0000018440725,0.00028496142,0.0013311866,0.9966618,0.0000025332456,0.00039897638,0.0007578535],"study_design_scores_gemma":[0.00021573222,0.000014933725,0.0038054262,0.000022429664,0.000044192297,0.00008802181,0.000072321454,0.0014332508,0.9938559,0.000016378835,0.00040144706,0.000029999903],"about_ca_topic_score_codex":0.0003230123,"about_ca_topic_score_gemma":0.00015270925,"teacher_disagreement_score":0.0032789109,"about_ca_system_score_codex":0.0000988059,"about_ca_system_score_gemma":0.00007701812,"threshold_uncertainty_score":0.22077015},"labels":[],"label_agreement":null},{"id":"W3177986058","doi":"10.1016/j.watres.2021.117424","title":"Salt selected for hydrocarbon-degrading bacteria and enhanced hydrocarbon biodegradation in slurry bioreactors","year":2021,"lang":"en","type":"article","venue":"Water Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Salinity; Hydrocarbon; Biodegradation; Microbial population biology; Environmental chemistry; Mineralization (soil science); Halotolerance; Population; Actinobacteria; Chemistry; Bacteria; Biology; Ecology","score_opus":0.03188445492979177,"score_gpt":0.2912958124699592,"score_spread":0.2594113575401675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3177986058","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982419,0.000024945493,0.000026072306,0.00062735117,0.00008146252,0.00034057556,0.000011031078,0.000024021572,0.0006226498],"genre_scores_gemma":[0.99871814,0.0000683688,0.00040765267,0.000050104758,0.00003407245,0.000021657532,0.00016219389,0.000015507641,0.0005223092],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99834394,0.00014025882,0.00022813374,0.00044261743,0.0003140754,0.000530996],"domain_scores_gemma":[0.9996235,0.00003589389,0.00002482222,0.00016484935,0.00003706121,0.000113911825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00070172676,0.00011863173,0.00014460988,0.00011825516,0.00012974908,0.00009009874,0.00012577763,0.00010991985,0.00049738877],"category_scores_gemma":[0.00011696263,0.000091233676,0.000024378889,0.00057211006,0.0001209884,0.00016129788,0.00015987379,0.00018395678,0.000102336104],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041931362,0.00004636037,0.015075467,0.00001322532,0.000004194754,0.000004152495,0.000553085,9.632067e-7,0.98229146,0.000005765762,0.00023768356,0.0017257326],"study_design_scores_gemma":[0.00049355,0.000056510857,0.028752912,0.000017112172,0.0000022543572,0.0000025425436,0.00005890688,0.0005541513,0.96743107,0.00018902162,0.0023076525,0.00013430498],"about_ca_topic_score_codex":0.00036089867,"about_ca_topic_score_gemma":0.0009817245,"teacher_disagreement_score":0.014860359,"about_ca_system_score_codex":0.00018507808,"about_ca_system_score_gemma":0.000029582088,"threshold_uncertainty_score":0.54460585},"labels":[],"label_agreement":null},{"id":"W3182080136","doi":"10.1002/cjce.24254","title":"Biosurfactant production by native marine bacteria ( <scp> <i>Acinetobacter calcoaceticus</i> </scp>   <scp>P1‐1A</scp> ) using waste carbon sources: Impact of process conditions","year":2021,"lang":"en","type":"article","venue":"The Canadian Journal of Chemical Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Acinetobacter calcoaceticus; Pulp and paper industry; Response surface methodology; Environmental science; Carbon fibers; Waste management; Chemistry; Food science; Bacteria; Materials science; Biology; Chromatography; Acinetobacter; Engineering","score_opus":0.007189422137766558,"score_gpt":0.2043429590983977,"score_spread":0.19715353696063115,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3182080136","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990117,0.00008776148,0.000015365918,0.00011656801,0.00025616225,0.00012818226,0.00012104616,0.000010205388,0.00025303164],"genre_scores_gemma":[0.99942315,0.0000106117795,0.00019631881,0.00004705984,0.00014713238,0.0000010787135,0.000033059783,0.000027766815,0.00011383915],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984965,0.00004389185,0.0004963613,0.00020826868,0.0003106084,0.00044441753],"domain_scores_gemma":[0.9987544,0.0001142602,0.00033561507,0.00017973769,0.00012889788,0.00048710307],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022086076,0.00023737007,0.00032000133,0.00008431135,0.000080174024,0.000061830506,0.0002685133,0.00012602826,0.00018784411],"category_scores_gemma":[0.0007167262,0.00017934124,0.00015055576,0.0005166839,0.00017784127,0.00019073236,0.000049514845,0.00037811245,0.000003857314],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000023773152,0.000023487839,0.003949485,0.000022150272,0.00007123779,0.000013215712,0.00078061566,0.009056207,0.9850652,0.0000010879982,0.0009868093,0.000028134373],"study_design_scores_gemma":[0.00029007092,0.000047754325,0.0021413255,0.00008840636,0.000060914906,0.00021839321,0.00020794779,0.0020125597,0.99418557,0.000014476156,0.0006642472,0.00006833364],"about_ca_topic_score_codex":0.0017639146,"about_ca_topic_score_gemma":0.000443907,"teacher_disagreement_score":0.009120378,"about_ca_system_score_codex":0.00061261345,"about_ca_system_score_gemma":0.00033405903,"threshold_uncertainty_score":0.73133236},"labels":[],"label_agreement":null},{"id":"W3186087709","doi":"10.3390/microorganisms9081569","title":"Methanogenic Biodegradation of iso-Alkanes by Indigenous Microbes from Two Different Oil Sands Tailings Ponds","year":2021,"lang":"en","type":"article","venue":"Microorganisms","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta","funders":"Helmholtz-Alberta Initiative; Natural Sciences and Engineering Research Council of Canada; Jabatan Perkhidmatan Awam Malaysia; Universiti Malaysia Perlis; Canada Foundation for Innovation; University of Alberta; Canadian Natural Resources Limited","keywords":"Methanosaeta; Biodegradation; Alkane; Tailings; Environmental chemistry; Chemistry; Methane; Naphtha; Oil sands; Biostimulation; Methanogenesis; Waste management; Hydrocarbon; Organic chemistry; Bioremediation; Ecology; Materials science; Biology; Asphalt; Contamination","score_opus":0.0051170556064691385,"score_gpt":0.20019964628496997,"score_spread":0.19508259067850084,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3186087709","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977654,0.000867713,0.00016869037,0.0002778374,0.00022482232,0.0000684448,0.00038404972,0.000041676863,0.00020134338],"genre_scores_gemma":[0.9950453,0.00029238014,0.0014360918,0.0004357213,0.0000422132,0.0000014419985,0.00070454576,0.0000257764,0.0020165406],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984845,0.000084191066,0.00040368742,0.00046151088,0.00025870057,0.00030744044],"domain_scores_gemma":[0.99931985,0.000042780997,0.0001944626,0.00030704,0.000029055716,0.00010683907],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00011310767,0.0002356966,0.00028730245,0.000036700076,0.00011178154,0.000050810355,0.00028507572,0.00013592088,0.008028218],"category_scores_gemma":[0.000026764204,0.00020845475,0.00010727438,0.0003142864,0.00013647534,0.000108238644,0.00020177082,0.0001189125,0.00046805944],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013695509,0.00014689042,0.013913607,0.000007732197,0.000031486576,0.000004533474,0.0011297778,0.0000012308542,0.977556,0.0000015000979,0.002127495,0.0050660498],"study_design_scores_gemma":[0.00062605075,0.00003541524,0.0048110127,0.000013046349,0.000041472813,0.000008241468,0.0001833961,0.0000057774982,0.9899277,0.00005638193,0.004045273,0.0002462303],"about_ca_topic_score_codex":0.00089769956,"about_ca_topic_score_gemma":0.0006388474,"teacher_disagreement_score":0.0123717,"about_ca_system_score_codex":0.00013434434,"about_ca_system_score_gemma":0.0000342142,"threshold_uncertainty_score":0.99287856},"labels":[],"label_agreement":null},{"id":"W3187322288","doi":"10.20944/preprints202108.0124.v1","title":"Overview Of Approaches to Improve Rhizoremediation of Petroleum Hydrocarbon-Contaminated Soils","year":2021,"lang":"en","type":"preprint","venue":"Preprints.org","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; King Saud University; Genome Canada","keywords":"Phytoremediation; Rhizobacteria; Environmental remediation; Rhizosphere; Microbial inoculant; Environmental science; Biochemical engineering; Soil contamination; Soil water; Contamination; Biology; Engineering; Ecology; Soil science; Bacteria","score_opus":0.15717622509531082,"score_gpt":0.2937032387010297,"score_spread":0.1365270136057189,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3187322288","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933592,0.00011147974,0.00007121372,0.00028427245,0.0004992306,0.00072837673,0.0000859016,0.000041315496,0.004819025],"genre_scores_gemma":[0.99869597,0.00018054312,0.0003958463,0.00009385195,0.000048840484,0.00004032184,0.0001443177,0.000028343875,0.0003719852],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969777,0.00018061846,0.0009197817,0.00097400637,0.0006219708,0.0003259236],"domain_scores_gemma":[0.9978715,0.000046992594,0.0007902188,0.0010612449,0.000047008263,0.00018304467],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00084962056,0.0003493937,0.0006672535,0.00010625827,0.000031232747,0.000012574487,0.0006790661,0.00038062123,0.0028801933],"category_scores_gemma":[0.00027626238,0.00035015203,0.00025722643,0.00030328604,0.00014390112,0.000105051426,0.002469478,0.00039481418,0.00045646014],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004038941,0.0002314162,0.32965356,0.00031400844,0.000065906395,0.0000025016232,0.0010539251,0.0007776201,0.66652244,0.000014837311,0.000033524826,0.001289837],"study_design_scores_gemma":[0.0002484497,0.000026127436,0.41485283,0.00013158513,0.000048686903,9.182962e-7,0.00009023974,0.0005476746,0.5835626,0.000051957246,0.00018723855,0.0002517005],"about_ca_topic_score_codex":0.00092346396,"about_ca_topic_score_gemma":0.00029817133,"teacher_disagreement_score":0.085199244,"about_ca_system_score_codex":0.00024713532,"about_ca_system_score_gemma":0.00009907366,"threshold_uncertainty_score":0.99989504},"labels":[],"label_agreement":null},{"id":"W3187498411","doi":"10.3390/applmicrobiol1020023","title":"Overview of Approaches to Improve Rhizoremediation of Petroleum Hydrocarbon-Contaminated Soils","year":2021,"lang":"en","type":"article","venue":"Applied Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Espace pour la vie","funders":"Natural Sciences and Engineering Research Council of Canada; King Saud University; Genome Canada","keywords":"Environmental remediation; Rhizobacteria; Environmental science; Microbial inoculant; Rhizosphere; Phytoremediation; Soil contamination; Biochemical engineering; Contamination; Soil water; Biology; Ecology; Engineering; Soil science; Bacteria","score_opus":0.03563853681596069,"score_gpt":0.21456976837711175,"score_spread":0.17893123156115107,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3187498411","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99431366,0.00009878137,0.00013492278,0.00024931852,0.00015265742,0.00024767296,0.00009079609,0.000015938118,0.0046962826],"genre_scores_gemma":[0.9982368,0.00003636673,0.0010396438,0.00031927018,0.000019344656,0.000008882572,0.00016097062,0.000010282624,0.0001684926],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99887294,0.000051288927,0.00040682996,0.00036003167,0.000069990514,0.0002389425],"domain_scores_gemma":[0.9994038,0.00004194648,0.00021661649,0.0002588733,0.000014614642,0.000064175074],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021176341,0.00014188416,0.00031911503,0.000041827487,0.000022306696,0.0000036341,0.0001813504,0.00015425964,0.0007870417],"category_scores_gemma":[0.000029140534,0.00012998837,0.00006516589,0.00027957867,0.00013793324,0.000027077718,0.0001995654,0.00007965124,0.00021614404],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033190685,0.00009512993,0.0014680026,0.000029355278,0.00001931965,9.875498e-7,0.0001820356,0.000031032752,0.993899,0.00032470425,0.0005712472,0.0033459794],"study_design_scores_gemma":[0.0004870565,0.00006284297,0.0053884326,0.000007929499,0.000018898,0.000005713192,0.00007086595,0.000027097103,0.99059093,0.00007481527,0.003126879,0.00013851769],"about_ca_topic_score_codex":0.000056323595,"about_ca_topic_score_gemma":0.0001883783,"teacher_disagreement_score":0.00452779,"about_ca_system_score_codex":0.000061516745,"about_ca_system_score_gemma":0.00003111251,"threshold_uncertainty_score":0.86175543},"labels":[],"label_agreement":null},{"id":"W3187513297","doi":"10.1128/aem.00800-21","title":"Diesel and Crude Oil Biodegradation by Cold-Adapted Microbial Communities in the Labrador Sea","year":2021,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Alberta; ArcticNet; Government of Canada; W. Garfield Weston Foundation; Alberta Innovates - Technology Futures; Marine Environmental Observation Prediction and Response Network; Association of Canadian Universities for Northern Studies; Genome Canada","keywords":"Biodegradation; Crude oil; Diesel fuel; Environmental science; Microbial population biology; Environmental chemistry; Biology; Ecology; Chemistry; Bacteria; Petroleum engineering; Geology","score_opus":0.006368654286143261,"score_gpt":0.17360501661569383,"score_spread":0.16723636232955058,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3187513297","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99757063,0.00037446647,0.000006847356,0.0007262022,0.000044384695,0.00010597797,0.00036837006,0.000011193101,0.0007919031],"genre_scores_gemma":[0.9945065,0.0013945732,0.00021821511,0.0025360736,0.000012709507,0.000009244955,0.0010344286,0.0000092098035,0.00027906772],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99910027,0.00012677458,0.00020105121,0.0002674156,0.00005159846,0.00025291147],"domain_scores_gemma":[0.99965614,0.00007170164,0.0000582853,0.00016778185,9.281678e-7,0.00004515981],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001682241,0.00017000463,0.00016369243,0.000018592094,0.00017411934,0.000033866098,0.0001419721,0.0001284056,0.0007550897],"category_scores_gemma":[0.0000028798365,0.00013302654,0.000020299882,0.00008457759,0.0006020958,0.00005553331,0.0002425917,0.00016420141,0.00008877653],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015764484,0.00010706462,0.010698543,0.0000051126494,0.000007310362,0.0000028557838,0.0008195098,0.0000010524859,0.9801712,0.000038134494,0.0039901375,0.004143317],"study_design_scores_gemma":[0.0028498983,0.00011254024,0.05624961,0.000017135291,0.00004089282,0.00022500637,0.009879698,0.000032380234,0.52007216,0.000063845706,0.40971628,0.000740529],"about_ca_topic_score_codex":0.000336849,"about_ca_topic_score_gemma":0.00091297156,"teacher_disagreement_score":0.460099,"about_ca_system_score_codex":0.000060345454,"about_ca_system_score_gemma":0.0000044536173,"threshold_uncertainty_score":0.82677025},"labels":[],"label_agreement":null},{"id":"W3188696061","doi":"10.1016/j.chemosphere.2021.131751","title":"Biodegradation of water-accommodated aromatic oil compounds in Arctic seawater at 0 °C","year":2021,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Fisheries and Oceans Canada; Villum Fonden","keywords":"Microcosm; Environmental chemistry; Biodegradation; Seawater; Phenanthrene; Acenaphthene; Chemistry; Acenaphthylene; Organic chemistry; Ecology; Biology","score_opus":0.009541764301737683,"score_gpt":0.19962403035147486,"score_spread":0.1900822660497372,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3188696061","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941096,0.000017400673,0.0000024687838,0.0004633326,0.00006708511,0.000034501096,0.0000043216082,0.00001478214,0.005286547],"genre_scores_gemma":[0.9956892,0.000016856899,0.00058813125,0.00014033199,0.0000060812067,0.0000015089379,0.00015591996,0.00000690752,0.0033950713],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992278,0.00003534808,0.00023128388,0.00018857156,0.0001470997,0.00016987136],"domain_scores_gemma":[0.99969894,0.000011282011,0.000048414007,0.00018983263,0.0000083807445,0.00004312711],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000093703886,0.00009094757,0.00013586447,0.0000051914258,0.000029989815,0.000012949981,0.000104333965,0.00006260014,0.009847989],"category_scores_gemma":[0.000013050758,0.000068436966,0.000033062806,0.00017568149,0.00007246103,0.000088687506,0.00014596037,0.000054141936,0.0007668176],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009364124,0.00008135002,0.122778475,0.000031677468,0.000003680338,0.0000053907625,0.0002295592,0.000020731122,0.87448585,5.714084e-7,0.0008790183,0.0014743492],"study_design_scores_gemma":[0.00039067527,0.0000083534305,0.04584745,0.000024868395,0.0000045355664,0.000006466168,0.000063246494,0.00019759117,0.95014614,0.000046637582,0.0031609775,0.00010308026],"about_ca_topic_score_codex":0.00022164681,"about_ca_topic_score_gemma":0.0009275862,"teacher_disagreement_score":0.07693103,"about_ca_system_score_codex":0.00017311396,"about_ca_system_score_gemma":0.000007353447,"threshold_uncertainty_score":0.99105716},"labels":[],"label_agreement":null},{"id":"W3189813667","doi":"10.1021/acs.estlett.1c00505","title":"Identification of a Fully Dechlorinated Product of Chlordecone in Soil Microcosms and Enrichment Cultures","year":2021,"lang":"en","type":"article","venue":"Environmental Science & Technology Letters","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Microcosm; Indene; Acetone; Chemistry; Chromatography; Decomposition; Organic chemistry; Environmental chemistry","score_opus":0.0030478635504260602,"score_gpt":0.19946301104352795,"score_spread":0.1964151474931019,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3189813667","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974088,0.00009891216,0.000022166994,0.0021326903,0.00006052705,0.00018697849,0.000010181951,0.00001491154,0.00006481784],"genre_scores_gemma":[0.9991594,0.00012641012,0.000469588,0.00016891757,0.0000033932806,0.0000067645487,0.000004346709,0.000004248441,0.000056931633],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986214,0.000019446801,0.00036002795,0.00047380824,0.00028349174,0.0002417984],"domain_scores_gemma":[0.9994951,0.000007707758,0.0001928498,0.00025806052,0.000004291376,0.000042019463],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033599176,0.000112343216,0.0001532998,0.00018365646,0.00006799078,0.0000101289315,0.0002924411,0.00006106774,0.00021062874],"category_scores_gemma":[0.000041874307,0.00010494693,0.0000226493,0.0010069486,0.0021596842,0.00018921812,0.0003320544,0.00010394627,0.000028097045],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005783164,0.0001293756,0.15242733,0.000004103536,0.0000024181406,0.0000042164493,0.00017476064,0.000041810043,0.84467596,0.000014950569,0.00004565502,0.0024736356],"study_design_scores_gemma":[0.00020427023,0.000023671202,0.23449558,0.0000063404073,0.0000037419927,0.000012662434,0.0002179678,0.000020504598,0.76464653,0.00003842837,0.00024719888,0.00008308923],"about_ca_topic_score_codex":0.0000348416,"about_ca_topic_score_gemma":0.000053324624,"teacher_disagreement_score":0.082068235,"about_ca_system_score_codex":0.00018521881,"about_ca_system_score_gemma":0.00001364941,"threshold_uncertainty_score":0.79574466},"labels":[],"label_agreement":null},{"id":"W3192136155","doi":"10.1016/j.heliyon.2021.e07689","title":"Ecological and human health risk assessment of total petroleum hydrocarbons in surface water and sediment from Woji Creek in the Niger Delta Estuary of Rivers State, Nigeria","year":2021,"lang":"en","type":"article","venue":"Heliyon","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"","keywords":"Niger delta; Estuary; Sediment; Petroleum; Delta; Environmental science; Human health; Hydrology (agriculture); Ecology; Water resource management; Geography; Oceanography; Geology; Geotechnical engineering; Geomorphology; Engineering; Environmental health; Biology","score_opus":0.009311061845607994,"score_gpt":0.24470190736754954,"score_spread":0.23539084552194156,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3192136155","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99904853,0.00011506613,0.000004604178,0.0004501104,0.000032551423,0.00014400145,0.00006401068,0.0000032985033,0.00013781767],"genre_scores_gemma":[0.9988204,0.00055381836,0.00036417466,0.00018666437,0.000003483254,0.0000014762509,0.000037405003,0.000003456578,0.000029099414],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99888647,0.0002616612,0.00025964223,0.00022684033,0.00018580562,0.00017959118],"domain_scores_gemma":[0.99968743,0.00005610609,0.00008647564,0.00011661632,0.0000029889068,0.00005040741],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043167672,0.000085597705,0.00018706647,0.000017323166,0.00004540234,0.000014613063,0.00006223907,0.00004625924,0.0002590827],"category_scores_gemma":[0.000007895414,0.00005879107,0.000019852587,0.00007790814,0.00012244367,0.0000549395,0.00012765413,0.00012299514,0.0000026066732],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000089859595,0.00016857122,0.8212148,0.000010955262,0.000004758112,0.000008701803,0.0011848704,0.00013931433,0.17709015,5.9461007e-7,0.00005057219,0.00011774681],"study_design_scores_gemma":[0.0005534267,0.00015296735,0.9875847,0.000025095569,0.000002807751,0.0000014378328,0.0005446281,0.00009812898,0.0108578345,0.000040126495,0.00006979892,0.00006901349],"about_ca_topic_score_codex":0.0027211392,"about_ca_topic_score_gemma":0.016384706,"teacher_disagreement_score":0.16636996,"about_ca_system_score_codex":0.0000819428,"about_ca_system_score_gemma":0.000019586258,"threshold_uncertainty_score":0.9143051},"labels":[],"label_agreement":null},{"id":"W3192318100","doi":"10.3389/fmicb.2021.704897","title":"Editorial: Biodegradation of High Molecular Weight Polyaromatic Hydrocarbons in Different Environments","year":2021,"lang":"en","type":"editorial","venue":"Frontiers in Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Berger (Canada)","funders":"Shastri Indo-Canadian Institute","keywords":"Biodegradation; Environmental chemistry; Chemistry; Environmental science; Organic chemistry","score_opus":0.002241326146980384,"score_gpt":0.18323921297053625,"score_spread":0.18099788682355586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3192318100","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09654744,0.0003349341,0.00022081107,0.00007875921,0.9020489,0.0003599939,0.00032488257,0.000010940473,0.000073349525],"genre_scores_gemma":[0.09995808,0.0020815013,0.004412893,0.000128884,0.88159263,0.000056173805,0.010779644,0.00013341471,0.0008567789],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99712443,0.00040131417,0.0008720181,0.00078301434,0.00031884015,0.0005003931],"domain_scores_gemma":[0.99891,0.00010335397,0.00045891857,0.0004478845,0.000004946812,0.00007487864],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00030114077,0.00045300077,0.0009297571,0.00025424067,0.000025449193,0.000014068471,0.00054262544,0.001494877,0.00030504368],"category_scores_gemma":[0.00019393626,0.0004150998,0.00013537286,0.00033544435,0.00033442408,0.00006735356,0.00030757565,0.00068013446,0.000056408495],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029628394,0.0001559502,0.0034726493,0.000015383988,0.000024530696,0.0000084829335,0.00005051456,0.0000066858647,0.36658213,5.259516e-7,0.62949646,0.00015708654],"study_design_scores_gemma":[0.0019392823,0.000119435965,0.0012468245,0.0001623485,0.000058702233,0.0000014469624,0.000042031923,0.000024015284,0.09453381,0.00026642272,0.9009329,0.0006727677],"about_ca_topic_score_codex":0.00058484776,"about_ca_topic_score_gemma":0.0003911044,"teacher_disagreement_score":0.2720483,"about_ca_system_score_codex":0.0008359372,"about_ca_system_score_gemma":0.00006653345,"threshold_uncertainty_score":0.99983007},"labels":[],"label_agreement":null},{"id":"W3194929483","doi":"10.1016/j.envpol.2021.117986","title":"Column tests for evaluation of the enzymatic biodegradation capacity of hydrocarbons (C10–C50) contaminated soil","year":2021,"lang":"en","type":"article","venue":"Environmental Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University; TechnoRem (Canada); Institut National de la Recherche Scientifique","funders":"","keywords":"Bioremediation; Biodegradation; Total petroleum hydrocarbon; Chemistry; Lipase; Biostimulation; Soil contamination; Environmental chemistry; Bioconversion; Laboratory flask; Chromatography; Contamination; Food science; Enzyme; Biochemistry; Biology; Organic chemistry; Ecology","score_opus":0.021841955854636465,"score_gpt":0.23001429916947017,"score_spread":0.2081723433148337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3194929483","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998225,0.00004071316,0.00016743873,0.00023444966,0.00016626045,0.0005554416,0.0002214302,0.000007692833,0.00038158955],"genre_scores_gemma":[0.9993661,0.000013254909,0.00023192103,0.0000900173,0.000012583622,0.000013492001,0.0000985946,0.000007629187,0.00016638245],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99861425,0.00018468841,0.00032938735,0.00020661965,0.00052521925,0.00013984373],"domain_scores_gemma":[0.9993994,0.000032632142,0.00029052375,0.00023117418,0.000008682318,0.00003755017],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049958465,0.000105837724,0.00013439539,0.000019297951,0.000095728035,0.000006264134,0.00011385602,0.000083998704,0.0006591247],"category_scores_gemma":[0.00013377231,0.00008947675,0.000093539194,0.00017876601,0.0002654594,0.000114917784,0.00007312661,0.000053736378,0.000029468581],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001151449,0.0001763895,0.014952839,0.000008653526,0.000011858315,5.449618e-8,0.00017948772,0.00031018004,0.9818345,0.00001804542,0.00032488382,0.0021716098],"study_design_scores_gemma":[0.0007782372,0.000037161506,0.35160506,0.000014783942,0.00006771374,0.0000021182498,0.000114019604,0.0052473266,0.6416916,0.0002163854,0.00014770037,0.00007788975],"about_ca_topic_score_codex":0.00012589933,"about_ca_topic_score_gemma":0.00043940643,"teacher_disagreement_score":0.34014288,"about_ca_system_score_codex":0.00038314212,"about_ca_system_score_gemma":0.000028190354,"threshold_uncertainty_score":0.7216953},"labels":[],"label_agreement":null},{"id":"W3198848007","doi":"10.1016/j.jhazmat.2021.127099","title":"Enzymatic biodegradation of highly p-xylene contaminated soil using cold-active enzymes: A soil column study","year":2021,"lang":"en","type":"article","venue":"Journal of Hazardous Materials","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; York University","funders":"","keywords":"Bioremediation; Chemistry; Biodegradation; Xylene; Environmental chemistry; Enzyme; Chromatography; Soil contamination; Human decontamination; Contamination; Benzene; Biochemistry; Organic chemistry; Waste management; Biology","score_opus":0.015452098660497826,"score_gpt":0.24007611594368847,"score_spread":0.22462401728319065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3198848007","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99867916,0.00005033025,0.000051753133,0.00009305425,0.00066933397,0.00025226598,0.00009459976,0.000009463981,0.00010000866],"genre_scores_gemma":[0.999073,0.000050977247,0.00053433824,0.0000881068,0.00007191361,0.0000013101544,0.000008788299,0.000015288235,0.00015624748],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977263,0.00037477436,0.001002006,0.00018367775,0.00050636556,0.00020687416],"domain_scores_gemma":[0.99826574,0.000059533733,0.0012316895,0.00017651153,0.00017115839,0.00009535573],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00075227505,0.00016957062,0.00054970564,0.000075396645,0.00008063434,0.00008099537,0.00018791495,0.000090274676,0.002417048],"category_scores_gemma":[0.00017606336,0.0001436809,0.00008610918,0.00027103178,0.000088319415,0.0002851081,0.00010031607,0.00008199832,0.000049335224],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001587816,0.00053497363,0.001756102,0.000022606917,0.000084286934,0.00008876186,0.0007271013,0.00010022882,0.9956576,0.0000041340013,0.0005477389,0.0003176856],"study_design_scores_gemma":[0.0014095851,0.00037181407,0.011754649,0.00007396487,0.000109605084,0.00008755932,0.0011192252,0.0000345622,0.98462707,0.000016200729,0.00024630668,0.00014948477],"about_ca_topic_score_codex":0.00031492685,"about_ca_topic_score_gemma":0.00026264947,"teacher_disagreement_score":0.011030555,"about_ca_system_score_codex":0.0002478306,"about_ca_system_score_gemma":0.00013237202,"threshold_uncertainty_score":0.99849486},"labels":[],"label_agreement":null},{"id":"W3202703680","doi":"10.3389/fbioe.2021.769899","title":"Editorial: Biosurfactants: New Insights in Their Biosynthesis, Production and Applications","year":2021,"lang":"en","type":"editorial","venue":"Frontiers in Bioengineering and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Production (economics); Biosynthesis; Computational biology; Biochemical engineering; Chemistry; Biology; Engineering; Biochemistry; Economics; Gene","score_opus":0.0033910332597200895,"score_gpt":0.1819418377861435,"score_spread":0.1785508045264234,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202703680","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0090374565,0.0042387326,0.0006744908,0.0008419507,0.9844388,0.00051119644,0.00007182963,0.000161352,0.00002420945],"genre_scores_gemma":[0.019231003,0.050152265,0.008252184,0.000033311564,0.9216233,0.000054253574,0.00022800289,0.00009022189,0.00033547872],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982303,0.00003558803,0.00037258735,0.0008035092,0.00021246291,0.00034554614],"domain_scores_gemma":[0.999417,0.000049474642,0.00011346031,0.0003165696,0.0000128520005,0.00009063894],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0002039971,0.00034402416,0.00045585303,0.00039088217,0.000050829334,0.0000433726,0.00023896711,0.0018741871,0.000015946596],"category_scores_gemma":[0.00034649545,0.0003133453,0.000031858188,0.00077390415,0.00025633318,0.00010137573,0.00022927433,0.0007899916,0.00000701158],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012483184,0.000041902338,0.0013159299,0.000046544043,0.000015441225,0.0000030678134,0.00007876249,0.000027688096,0.031858638,0.00000452516,0.954126,0.01246903],"study_design_scores_gemma":[0.0002476862,0.000032890726,0.00024494127,0.00011883752,0.000010589985,0.0000022281258,0.000120662866,0.00008542177,0.012620643,0.00008678948,0.98606,0.0003692652],"about_ca_topic_score_codex":0.00021743958,"about_ca_topic_score_gemma":0.00044977333,"teacher_disagreement_score":0.0628155,"about_ca_system_score_codex":0.00024142762,"about_ca_system_score_gemma":0.000056010696,"threshold_uncertainty_score":0.9999319},"labels":[],"label_agreement":null},{"id":"W3208995514","doi":"10.1016/j.watres.2021.117809","title":"Multi-element isotopic evidence for monochlorobenzene and benzene degradation under anaerobic conditions in contaminated sediments","year":2021,"lang":"en","type":"article","venue":"Water Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"European Regional Development Fund; Helmholtz Association; Helmholtz-Zentrum für Umweltforschung","keywords":"Environmental chemistry; Chemistry; Reductive dechlorination; Biodegradation; Benzene; Isotope analysis; Microbial biodegradation; Carbon fibers; Chlorine; Human decontamination; Contamination; Geology; Microorganism; Organic chemistry; Ecology; Waste management","score_opus":0.1394012635512652,"score_gpt":0.3841179467258276,"score_spread":0.2447166831745624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3208995514","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99738514,0.00005709688,0.00026086989,0.0016038482,0.00005480167,0.00056229846,0.000020553876,0.000010439746,0.000044928624],"genre_scores_gemma":[0.99605286,0.00011213242,0.0013922484,0.0001911962,0.000011387424,0.000052135107,0.00014102863,0.000007927486,0.0020391075],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99865,0.00015285754,0.00020383346,0.0003442012,0.00027515166,0.00037391417],"domain_scores_gemma":[0.99964046,0.000048544644,0.000019732717,0.00015143729,0.000051186486,0.00008862909],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006952547,0.0000845668,0.00009832068,0.00007134604,0.00015148637,0.00005949708,0.000108880144,0.00006183965,0.0020756333],"category_scores_gemma":[0.0000686977,0.000067132874,0.00002001268,0.00021299125,0.00008716637,0.00020179438,0.00019788285,0.00011499319,0.0001590699],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019166486,0.000102983264,0.024557723,0.000013509212,0.00000596423,0.000005720441,0.0003119182,0.00004212743,0.97363424,0.000018848386,0.00043121923,0.00085657067],"study_design_scores_gemma":[0.0011973117,0.0000791922,0.19228892,0.000042975847,0.0000044101625,0.0000022323495,0.00022612631,0.0014405741,0.8026002,0.00015434461,0.0018486636,0.000115044044],"about_ca_topic_score_codex":0.00050499523,"about_ca_topic_score_gemma":0.0027731035,"teacher_disagreement_score":0.17103404,"about_ca_system_score_codex":0.0002392104,"about_ca_system_score_gemma":0.000020909827,"threshold_uncertainty_score":0.9988366},"labels":[],"label_agreement":null},{"id":"W3212636936","doi":"10.5267/j.ccl.2021.9.006","title":"A review on green remediation techniques for hydrocarbons and heavy metals contaminated soil","year":2021,"lang":"en","type":"review","venue":"Current Chemistry Letters","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Environmental remediation; Pollutant; Environmental chemistry; Chemistry; Heavy metals; Soil contamination; Contamination; Waste management; Environmental science; Soil water; Soil science; Ecology; Organic chemistry","score_opus":0.034379077999056956,"score_gpt":0.3055287705831998,"score_spread":0.2711496925841429,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3212636936","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00011295505,0.9975881,0.000029643556,0.00077646173,0.00013791522,0.0010457559,0.00015961762,0.000059380025,0.00009018601],"genre_scores_gemma":[0.000013957626,0.9973875,0.0000684427,0.00084773987,0.00014298155,0.00016377,0.0013017146,0.000029457953,0.00004443562],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99829596,0.00007705111,0.00052760146,0.00061740767,0.000219945,0.0002620137],"domain_scores_gemma":[0.9990394,0.00009237058,0.00041922976,0.0003135847,0.000009895616,0.00012552891],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00030688464,0.00040496222,0.0009735119,0.00002170841,0.00006320806,0.000031500444,0.00022584316,0.00017919537,0.0002334366],"category_scores_gemma":[0.00011583421,0.00033535255,0.00031255602,0.00021674456,0.000113619644,0.00005208491,0.0001135104,0.00028126824,0.000040232822],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000028200484,0.000054206383,0.0000022311815,0.027658237,0.0000428355,0.000002833205,0.0000083077875,1.7921634e-8,0.014270146,3.7944278e-7,0.036158744,0.92179924],"study_design_scores_gemma":[0.000099509496,0.000004564447,6.263041e-7,0.025085788,0.00040665455,0.000010947537,6.703341e-7,0.000003030115,0.0076089245,0.0000011234247,0.9664114,0.00036673376],"about_ca_topic_score_codex":0.000009214224,"about_ca_topic_score_gemma":0.0000024936712,"teacher_disagreement_score":0.9302527,"about_ca_system_score_codex":0.0002474094,"about_ca_system_score_gemma":0.000034705925,"threshold_uncertainty_score":0.9999099},"labels":[],"label_agreement":null},{"id":"W3213093394","doi":"10.1007/s11356-021-17387-5","title":"Biodegradation of p-xylene—a comparison of three psychrophilic Pseudomonas strains through the lens of gene expression","year":2021,"lang":"en","type":"article","venue":"Environmental Science and Pollution Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; York University","funders":"Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada","keywords":"Pseudomonas putida; Biodegradation; Dioxygenase; Pseudomonas; Chemistry; Biochemistry; Catabolism; Bacteria; Microbiology; Metabolism; Biology; Gene; Organic chemistry; Genetics","score_opus":0.07863310493051164,"score_gpt":0.3413577130549709,"score_spread":0.2627246081244593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3213093394","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99735343,0.00021568577,0.00012704171,0.00072792626,0.000049994043,0.00018989205,0.0000819316,0.000002809696,0.0012512823],"genre_scores_gemma":[0.9986735,0.0003157838,0.000888703,0.00003466664,0.000011899955,0.0000019966644,0.000010130836,0.0000034605523,0.000059864098],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976994,0.00012913483,0.00032108286,0.00029049395,0.0013144101,0.00024549922],"domain_scores_gemma":[0.9994471,0.00003625732,0.00015235692,0.00028241155,0.000024285593,0.000057586672],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00103286,0.00008111802,0.00013832864,0.000050385057,0.00028743365,0.000013360261,0.00029725934,0.00005572295,0.0010584262],"category_scores_gemma":[0.00006916374,0.000056749755,0.000036673893,0.0006988504,0.0034880068,0.00027308543,0.0002707442,0.00012571583,0.000024222249],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001380139,0.00017985863,0.026742486,0.000006258544,0.000002395941,2.4849288e-7,0.00079434994,0.000059203565,0.9683082,0.00012901034,0.00022509646,0.0035390574],"study_design_scores_gemma":[0.00015157061,0.00009035861,0.24189793,0.000011560972,0.0000028141753,0.0000017144715,0.00088337116,0.00014491857,0.7560794,0.00011577594,0.0005742342,0.000046400648],"about_ca_topic_score_codex":0.00021780263,"about_ca_topic_score_gemma":0.000098743556,"teacher_disagreement_score":0.21515544,"about_ca_system_score_codex":0.000106478205,"about_ca_system_score_gemma":0.000056914276,"threshold_uncertainty_score":0.99985474},"labels":[],"label_agreement":null},{"id":"W3215287307","doi":"10.1128/aem.01993-21","title":"Heterologous Expression of Active <i>Dehalobacter</i> Respiratory Reductive Dehalogenases in Escherichia coli","year":2021,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Government of Canada","keywords":"Heterologous; Heterologous expression; Escherichia coli; Cofactor; Enzyme; Obligate; Bacteria; Active site; Yeast","score_opus":0.0067335698837842125,"score_gpt":0.18765646077129897,"score_spread":0.18092289088751476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3215287307","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99868435,0.000120206685,0.0000035525075,0.0000322075,0.0000637154,0.00016557786,0.00023110285,0.000008901879,0.00069037074],"genre_scores_gemma":[0.99856526,0.00012878589,0.0003240221,0.00071141036,0.000013719582,0.0000072794974,0.00020563886,0.000010331763,0.000033576336],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99893135,0.00008949518,0.00025850988,0.00042954006,0.00004713913,0.00024398004],"domain_scores_gemma":[0.99962676,0.00003548713,0.00011532732,0.00015752637,0.0000014793139,0.00006339985],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000066638844,0.00016459725,0.00023523468,0.000025204881,0.000046614572,0.000004359704,0.000099100296,0.00016858685,0.0008489401],"category_scores_gemma":[0.000006680004,0.00015193495,0.000035640765,0.00009072921,0.00048567943,0.000052045692,0.00027337632,0.00013687827,0.000058644317],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000075897704,0.00023926939,0.020416774,0.0000041423714,0.000006611794,0.000009222291,0.00029400704,0.000011338651,0.97719425,0.000004975917,0.0001884373,0.0015550693],"study_design_scores_gemma":[0.0005440976,0.000056843608,0.14304307,0.0000055961245,0.0000062293993,0.0000134517495,0.00056366634,6.739141e-7,0.85292864,0.000030403584,0.0026684916,0.00013881948],"about_ca_topic_score_codex":0.0000255538,"about_ca_topic_score_gemma":0.000067557296,"teacher_disagreement_score":0.1242656,"about_ca_system_score_codex":0.000098748336,"about_ca_system_score_gemma":0.000008739406,"threshold_uncertainty_score":0.9295299},"labels":[],"label_agreement":null},{"id":"W3217224927","doi":"10.3390/w13223311","title":"Establishing and Optimizing a Bacterial Consortia for Effective Biodegradation of Petroleum Contaminants: Advancing Classical Microbiology via Experimental and Mathematical Approach","year":2021,"lang":"en","type":"article","venue":"Water","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biodegradation; Bioremediation; Bacillus cereus; Microbacterium; Rhodococcus; Microbial consortium; Pseudomonas; Petroleum; Chemistry; Microbiology; Environmental chemistry; Biology; Contamination; Bacteria; Food science; Microorganism; Ecology; Organic chemistry","score_opus":0.006191615490053201,"score_gpt":0.21114967603114818,"score_spread":0.20495806054109497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3217224927","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9907214,0.000023501027,0.0086966455,0.00008883753,0.0000763817,0.00023049343,0.000027136879,0.000007978982,0.00012762683],"genre_scores_gemma":[0.98370177,0.0000029434154,0.016070934,0.000050244875,0.000020138143,0.000011340339,0.00008339472,0.00000676384,0.000052471696],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992907,0.000059531187,0.00017987724,0.0002456401,0.000044074714,0.00018016213],"domain_scores_gemma":[0.9997683,0.00006395022,0.000046781497,0.000062330626,0.000009233982,0.000049404698],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016925654,0.00009501832,0.00017978957,0.000015588175,0.000057004752,0.00003398916,0.000036103094,0.000073081814,0.00025173574],"category_scores_gemma":[0.000033488122,0.0000669434,0.000025695606,0.000023233915,0.00016786346,0.00015808057,0.00011734125,0.000044791912,0.0000055263795],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000063204716,0.00006973529,0.001031524,0.000023951674,0.000008730695,0.0000011596258,0.0006718267,0.0000013980704,0.9973346,0.000012274482,0.00008487857,0.00069668685],"study_design_scores_gemma":[0.00086300995,0.00008207728,0.00067736785,0.000012511942,0.000014723362,0.00004853412,0.00035728887,0.0016612557,0.9954518,0.000024373168,0.00070650625,0.0001005691],"about_ca_topic_score_codex":0.000007957201,"about_ca_topic_score_gemma":0.0000059217905,"teacher_disagreement_score":0.0073742894,"about_ca_system_score_codex":0.000032629465,"about_ca_system_score_gemma":0.000003817688,"threshold_uncertainty_score":0.27563298},"labels":[],"label_agreement":null},{"id":"W400560637","doi":"","title":"Molecular Investigation of Chloroethene Reductive Dehalogenation by the Mixed Microbial Community KB1","year":2010,"lang":"en","type":"dissertation","venue":"Library and Archives Canada (Government of Canada)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Halogenation; Chemistry; Environmental chemistry; Computational chemistry; Combinatorial chemistry; Organic chemistry","score_opus":0.0029967680968210637,"score_gpt":0.14449059810702075,"score_spread":0.1414938300101997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W400560637","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9728705,0.00005067107,0.000003181788,0.0009040844,0.00029207906,0.00023153966,0.00043216886,0.0000038175226,0.025211915],"genre_scores_gemma":[0.9963294,0.00004949359,0.00017191608,0.00045068093,0.000015648311,0.00000380663,0.0004366148,0.000015943406,0.0025264944],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981909,0.0001865577,0.00031376054,0.00017522834,0.0009753651,0.00015818774],"domain_scores_gemma":[0.99913454,0.00011432434,0.00042537157,0.00021428951,9.0702565e-7,0.000110588815],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000033854056,0.00018650554,0.00019656189,0.000012520667,0.00020238347,0.000012734498,0.00033174138,0.00008656769,0.0001131368],"category_scores_gemma":[0.000009223565,0.00015414895,0.000031626878,0.00009172987,0.0002058065,0.00015224316,0.00008793927,0.00036460935,1.0228337e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014391213,0.00001665529,0.0020613428,0.000049693437,0.000027128466,0.0000012052791,0.00038985987,0.0000093726885,0.99323523,0.0003647354,0.0017821208,0.0019187708],"study_design_scores_gemma":[0.00014802344,0.00002870862,0.06258729,0.000036321493,0.000024887217,0.0000012351574,0.0018389706,0.000037492548,0.9331908,0.0003344703,0.0016227914,0.00014900985],"about_ca_topic_score_codex":0.0143631855,"about_ca_topic_score_gemma":0.18321396,"teacher_disagreement_score":0.16885078,"about_ca_system_score_codex":0.000013797,"about_ca_system_score_gemma":0.00042376854,"threshold_uncertainty_score":0.99220026},"labels":[],"label_agreement":null},{"id":"W4200084159","doi":"10.1201/9781003078777-22","title":"Use of GCLs to control migration of hydrocarbons in severe environmental conditions","year":2021,"lang":"en","type":"book-chapter","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Royal Military College of Canada; Queen's University","funders":"","keywords":"Environmental science","score_opus":0.013120091077532434,"score_gpt":0.1961732762987071,"score_spread":0.18305318522117467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200084159","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.72717214,0.000044623255,0.00007881616,0.0007222751,0.00018480525,0.0013997115,0.002432438,0.00002423446,0.26794097],"genre_scores_gemma":[0.8600074,0.00006438459,0.00024235653,0.00045925722,0.00000882859,0.000002477143,0.00023262047,0.000012515627,0.13897014],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989455,0.000019497724,0.00041583646,0.00025184537,0.00025409207,0.00011322442],"domain_scores_gemma":[0.9994991,0.000048955404,0.00017571847,0.00019991948,0.000002378887,0.00007394541],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000060845025,0.00016121124,0.00027816778,0.00006782362,0.000014986315,0.0000068840263,0.00009336514,0.00017511309,0.016426599],"category_scores_gemma":[0.000013303348,0.00015502323,0.00009450598,0.00003881432,0.00012056147,0.00008351823,0.00006910686,0.00009362319,0.00022373653],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028358165,0.00012273177,0.017054051,0.00000847795,0.000035500325,0.0000067021992,0.0001532095,0.00022087037,0.9735536,0.0011444354,0.007197929,0.00047413423],"study_design_scores_gemma":[0.0041065305,0.0007856541,0.41683593,0.0006591658,0.00034623456,0.00003266314,0.00025445138,0.00061924575,0.24177948,0.0014477989,0.330476,0.0026568584],"about_ca_topic_score_codex":0.00024466956,"about_ca_topic_score_gemma":0.0028570767,"teacher_disagreement_score":0.7317741,"about_ca_system_score_codex":0.00013053036,"about_ca_system_score_gemma":0.000014804417,"threshold_uncertainty_score":0.9844725},"labels":[],"label_agreement":null},{"id":"W4200186432","doi":"10.1016/j.nbt.2021.12.001","title":"Rhamnolipids from non-pathogenic Acinetobacter calcoaceticus: Bioreactor-scale production, characterization and wound healing potency","year":2021,"lang":"en","type":"article","venue":"New Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Innovation and Technology Commission","keywords":"Rhamnolipid; Acinetobacter calcoaceticus; Wound healing; Bioreactor; In vivo; Chemistry; Microbiology; Fibroblast; Quorum sensing; Potency; Pseudomonas aeruginosa; In vitro; Biochemistry; Biology; Bacteria; Acinetobacter; Immunology; Biotechnology; Gene; Antibiotics","score_opus":0.006773241530264266,"score_gpt":0.19975803302583675,"score_spread":0.1929847914955725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200186432","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98764604,0.00007912248,0.0017900338,0.009359112,0.0005925588,0.00017859813,0.00005161189,0.0001219093,0.00018103444],"genre_scores_gemma":[0.9929157,0.00083337305,0.0032604095,0.0006884045,0.00026476625,0.000003125669,0.00026893022,0.000020435817,0.0017448837],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987014,0.000033390814,0.0002600258,0.00058785814,0.00013750762,0.00027981927],"domain_scores_gemma":[0.99940467,0.000009212591,0.00010794419,0.0003493464,0.000017792772,0.00011101251],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007870112,0.00017178299,0.00019134038,0.000055584384,0.00009961638,0.000038047358,0.00013638842,0.00043063445,0.0013211827],"category_scores_gemma":[0.00006194631,0.00015962427,0.00003552818,0.00041143823,0.00017360145,0.00018126961,0.00019016353,0.00020833303,0.00033410385],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000919277,0.000037373768,0.015100652,0.0000029842065,0.000006337118,0.000004168005,0.00012935745,7.4152337e-7,0.9348309,0.000009304639,0.00047529934,0.049393702],"study_design_scores_gemma":[0.00033499717,0.000046356756,0.099556096,0.000014333734,0.000018668457,0.000037650458,0.00006365278,0.000048473314,0.845743,0.00010136106,0.05381795,0.00021743553],"about_ca_topic_score_codex":0.00035999194,"about_ca_topic_score_gemma":0.0006644273,"teacher_disagreement_score":0.08908786,"about_ca_system_score_codex":0.00009191116,"about_ca_system_score_gemma":0.000037388436,"threshold_uncertainty_score":0.99959177},"labels":[],"label_agreement":null},{"id":"W4200284512","doi":"10.1016/b978-0-12-823830-1.00015-8","title":"Microbial consortium for bioremediation of polycyclic aromatic hydrocarbons polluted sites","year":2021,"lang":"en","type":"book-chapter","venue":"Elsevier eBooks","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Bioremediation; Environmental science; Remedial action; Environmental chemistry; Biodegradation; Microbial population biology; Pollution; Biochemical engineering; Environmental remediation; Waste management; Environmental engineering; Contamination; Chemistry; Engineering; Biology; Ecology; Bacteria","score_opus":0.013757224390345057,"score_gpt":0.2196424769914506,"score_spread":0.20588525260110555,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200284512","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04138305,0.00033716415,0.000014094408,0.00023729095,0.00071008765,0.0015446718,0.00041886154,0.00007792171,0.95527685],"genre_scores_gemma":[0.11069556,0.00007059352,0.0013266312,0.00056676695,0.00021463312,0.000017025493,0.0004997314,0.00008272948,0.88652635],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99807084,0.00003174809,0.0007425425,0.0005063217,0.00033299316,0.0003155733],"domain_scores_gemma":[0.9987253,0.00009103705,0.0006275251,0.00040991494,0.0000075440757,0.00013868947],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00019884286,0.0003864817,0.00056031515,0.0001026533,0.000083656494,0.000028447532,0.00026940025,0.00040344504,0.0007779569],"category_scores_gemma":[0.000059931142,0.00037151863,0.0003274406,0.000038223625,0.0003292772,0.000043966014,0.00012955474,0.00018129523,0.00025080284],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038625516,0.00003949838,0.000218872,0.00005724419,0.000113183465,0.0000057247616,0.00021859375,4.323314e-7,0.80516136,0.000080513455,0.0018672077,0.19219877],"study_design_scores_gemma":[0.0013540504,0.0001727171,0.00075644325,0.00034337773,0.00040563854,0.000017966897,0.000020596066,0.000058159196,0.13134104,0.002318823,0.8621364,0.0010747887],"about_ca_topic_score_codex":0.0000028862257,"about_ca_topic_score_gemma":0.00024015002,"teacher_disagreement_score":0.8602692,"about_ca_system_score_codex":0.00015082768,"about_ca_system_score_gemma":0.000078404875,"threshold_uncertainty_score":0.9998737},"labels":[],"label_agreement":null},{"id":"W4205269615","doi":"10.1139/cjm-2021-0177","title":"Phenanthrene-degrading <i>Sphingobium xenophagum</i> are widely distributed in the western Pacific Ocean","year":2022,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Phenanthrene; Sphingomonas; Bacteria; Strain (injury); Microbiology; 16S ribosomal RNA; Pseudomonas; Plasmid; Marine bacteriophage; Bioremediation; Pseudomonas putida; Biology; Chemistry; Seawater; Soil microbiology; Sphingomonas paucimobilis; Gene; Biochemistry; Environmental chemistry; Ecology; Genetics","score_opus":0.010700913980330008,"score_gpt":0.1928147190749954,"score_spread":0.18211380509466538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205269615","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934881,0.00025037507,0.0000112532825,0.00489438,0.0006074656,0.00011605194,0.0004116601,0.000003717058,0.00021704315],"genre_scores_gemma":[0.9976183,0.000011690519,0.000023904322,0.0021276735,0.000049876304,7.301882e-7,0.00004715615,0.000008972534,0.000111687215],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99866027,0.0002863845,0.0003926407,0.00016737563,0.00008261477,0.0004107276],"domain_scores_gemma":[0.9992679,0.000052981984,0.00032671093,0.00014968829,0.000014238517,0.00018849561],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007604717,0.00012892732,0.00020331758,0.000108976186,0.0002908337,0.000034215267,0.0006669428,0.000060728045,0.0012219631],"category_scores_gemma":[0.00004586958,0.00009506276,0.00007873913,0.00037199407,0.00021620994,0.00007742853,0.0000578166,0.00042854637,0.000050988172],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039044735,0.000056542944,0.5600241,0.000004096589,0.000019504243,0.0005712161,0.0024361955,0.0005620162,0.25670674,0.000010208076,0.17911315,0.00045717467],"study_design_scores_gemma":[0.0016708563,0.00039347511,0.116582364,0.00003358989,0.00003497622,0.0036990526,0.0062561063,0.000016672831,0.0076087397,0.000104137456,0.86307704,0.0005229594],"about_ca_topic_score_codex":0.0024156927,"about_ca_topic_score_gemma":0.03211672,"teacher_disagreement_score":0.6839639,"about_ca_system_score_codex":0.00048984605,"about_ca_system_score_gemma":0.00016045767,"threshold_uncertainty_score":0.99969107},"labels":[],"label_agreement":null},{"id":"W4205408204","doi":"10.1139/cjm-2021-0056","title":"Aerobic polychlorinated biphenyl-degrading bacteria isolated from the Tohoku region of Japan are not regionally endemic","year":2022,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Comamonas testosteroni; Stenotrophomonas; Achromobacter; Comamonas; Biology; Microbiology; Bacteria; Pseudomonas; Alcaligenes; Aerobic bacteria; Rhodococcus; Genetics","score_opus":0.01660006681406519,"score_gpt":0.18934977972108472,"score_spread":0.17274971290701951,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205408204","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948698,0.00017403987,0.0000124097305,0.0036168005,0.0008982011,0.00011087072,0.00023325508,0.00000515778,0.0000794482],"genre_scores_gemma":[0.9976136,0.000030392297,0.00008602338,0.0018681603,0.00007169502,9.075718e-7,0.00005812752,0.000012818313,0.0002582926],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.998644,0.00028156492,0.0004617335,0.0001987283,0.000082519335,0.00033144263],"domain_scores_gemma":[0.9987369,0.00009307465,0.000715936,0.00019892464,0.00003531969,0.00021980019],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00036436692,0.000147556,0.00026652223,0.00010761677,0.00026555508,0.000015338723,0.00067680137,0.000106994055,0.0043255244],"category_scores_gemma":[0.00006632236,0.0001137125,0.000121294295,0.00031601608,0.00030099298,0.00007502233,0.00008352165,0.00040424682,0.000034528573],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001033847,0.00001458163,0.057481594,0.0000011567356,0.000039900373,0.0000395252,0.00050939975,0.000041402884,0.9091363,0.000012204046,0.032247283,0.0003733],"study_design_scores_gemma":[0.0029213412,0.000989418,0.30680868,0.000120421646,0.00014090457,0.0044775656,0.002495706,0.00005044257,0.099436305,0.00015898455,0.58156705,0.00083321676],"about_ca_topic_score_codex":0.007281342,"about_ca_topic_score_gemma":0.021558017,"teacher_disagreement_score":0.80969995,"about_ca_system_score_codex":0.0004554178,"about_ca_system_score_gemma":0.0002524151,"threshold_uncertainty_score":0.99932927},"labels":[],"label_agreement":null},{"id":"W4206022247","doi":"10.7901/2169-3358-2021.1.800005","title":"Characterization of the Microbial Community Structure and Function During the Natural Attenuation of Oil in Marine Environments Using In Situ Microcosms","year":2021,"lang":"en","type":"article","venue":"International Oil Spill Conference Proceedings","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Fisheries and Oceans Canada; Huntsman Marine Science Centre; McGill University; National Research Council Canada","funders":"","keywords":"Microcosm; Environmental science; Context (archaeology); Microbial population biology; Environmental remediation; Petroleum; Environmental chemistry; Natural (archaeology); Contamination; Ecology; Geology; Chemistry; Biology","score_opus":0.010684324826218667,"score_gpt":0.20582325758178394,"score_spread":0.19513893275556526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206022247","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99918526,0.0000031256038,0.0000037590896,0.000309405,0.00016161265,0.000047145466,0.00002259911,0.0000020190926,0.0002650572],"genre_scores_gemma":[0.9995754,0.000033909902,0.000064425214,0.00009439309,0.000016150672,0.0000013227277,0.000033517306,0.0000044619433,0.00017642237],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99924767,0.000034495035,0.00027743517,0.00013894372,0.00020933177,0.00009214522],"domain_scores_gemma":[0.9996272,0.000012372105,0.00024005657,0.00006415628,0.000042359818,0.00001391081],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001455872,0.00009030253,0.00009914328,0.000039520055,0.000059873837,0.000027092563,0.0002010177,0.00005527992,0.00020934496],"category_scores_gemma":[0.000052863204,0.00006601254,0.000023045915,0.00018364438,0.00013222464,0.00020341424,0.0003097157,0.00021348655,0.0000011018097],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033484037,0.000027512666,0.2638957,0.000016123699,0.0000042369716,1.6085315e-7,0.0006430167,0.00000848076,0.7339913,0.000016623202,5.890956e-7,0.0013627467],"study_design_scores_gemma":[0.00026190397,0.000004130985,0.5437208,0.000041016658,0.0000032085434,0.0000049336377,0.000119053344,0.00017508304,0.455553,0.000031328575,0.000045807297,0.000039729082],"about_ca_topic_score_codex":0.00029729542,"about_ca_topic_score_gemma":0.0011310528,"teacher_disagreement_score":0.2798251,"about_ca_system_score_codex":0.00014588115,"about_ca_system_score_gemma":0.000016188038,"threshold_uncertainty_score":0.2691913},"labels":[],"label_agreement":null},{"id":"W4206667946","doi":"10.1002/9780470054581.eib153","title":"Bioremediation","year":2010,"lang":"en","type":"other","venue":"Encyclopedia of Industrial Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Bioremediation; Biostimulation; Chemistry; Cometabolism; Environmental chemistry; Environmental remediation; Biotransformation; Anoxic waters; Biodegradation; Contamination; Biochemistry; Organic chemistry; Enzyme; Biology; Ecology","score_opus":0.010340835354667375,"score_gpt":0.2126518445978896,"score_spread":0.20231100924322223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206667946","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0067483187,0.000059579685,0.000021316404,0.0010968057,0.0031354637,0.0006079516,0.00021400175,0.00039708268,0.9877195],"genre_scores_gemma":[0.011595388,0.005681556,0.0053006066,0.00032365386,0.0031341854,0.000029214949,0.0005009524,0.0007663358,0.9726681],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985599,0.000038492293,0.00040019906,0.00043096626,0.00027515937,0.00029528275],"domain_scores_gemma":[0.998837,0.000026112319,0.0005678399,0.0004822955,0.000005834497,0.00008090404],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001688343,0.00027890172,0.0003830596,0.00027986165,0.000024179772,0.000005497408,0.00052374974,0.0037127032,0.046148136],"category_scores_gemma":[0.0003064607,0.00024892663,0.00008390096,0.00047122562,0.00055415055,0.00002983188,0.00024718762,0.0008450905,0.0020945708],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009357883,0.000054657852,0.0022390706,0.0000040814584,0.000015646618,0.0000030297713,0.0000116516285,1.8228123e-7,0.043161515,0.00007588008,0.8927173,0.06170762],"study_design_scores_gemma":[0.00043229255,0.00006646107,0.00006460259,0.000022690836,0.000021476493,0.0000021928295,0.000007303356,0.0000011607284,0.030546302,0.000037031703,0.9685497,0.00024877384],"about_ca_topic_score_codex":0.00070964627,"about_ca_topic_score_gemma":0.0012107736,"teacher_disagreement_score":0.075832404,"about_ca_system_score_codex":0.000051492607,"about_ca_system_score_gemma":0.00004899459,"threshold_uncertainty_score":0.9999963},"labels":[],"label_agreement":null},{"id":"W4207077476","doi":"10.3390/molecules27030687","title":"Biodegradation Potential of Bacillus sp. PAH-2 on PAHs for Oil-Contaminated Seawater","year":2022,"lang":"en","type":"article","venue":"Molecules","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Bedford Institute of Oceanography; Fisheries and Oceans Canada","funders":"","keywords":"Pyrene; Anthracene; Biodegradation; Environmental chemistry; Chemistry; Pollutant; Degradation (telecommunications); Contamination; Seawater; Microbial biodegradation; Oil spill; Crude oil; Bacteria; Environmental science; Organic chemistry; Microorganism; Environmental engineering; Ecology; Biology","score_opus":0.007528675532894167,"score_gpt":0.19761005685872945,"score_spread":0.1900813813258353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4207077476","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99766886,0.0000071449913,0.00028702154,0.0004831996,0.00016315716,0.0001245895,0.0002334328,0.000018514636,0.0010140901],"genre_scores_gemma":[0.998031,0.000005147841,0.00041188256,0.00034430105,0.000009929809,0.000011740818,0.00022442864,0.000007567159,0.0009539669],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992832,0.0000576984,0.0001431617,0.00017764035,0.00020309466,0.00013520192],"domain_scores_gemma":[0.9997698,0.0000124151675,0.00007290991,0.00010670122,0.0000072811276,0.000030856252],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001584988,0.00007710234,0.00007976531,0.000028730326,0.000101655394,0.00000915888,0.0001230496,0.000027216056,0.0026380366],"category_scores_gemma":[0.000013784519,0.00006723108,0.00005078441,0.000100127494,0.000046226716,0.000034208413,0.00008827752,0.00004568979,0.000075508666],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008541635,0.00009597852,0.0007765245,0.000005887457,0.000006811727,0.0000028772354,0.00010066435,0.00037706378,0.9751114,0.000022195109,0.0052495855,0.018165596],"study_design_scores_gemma":[0.0010334619,0.0003865418,0.01334637,0.0000046630735,0.000018643885,0.0000039664774,0.00017322146,0.0020547865,0.9395667,0.00007630752,0.043110047,0.0002253177],"about_ca_topic_score_codex":0.00010195955,"about_ca_topic_score_gemma":0.000028237524,"teacher_disagreement_score":0.03786046,"about_ca_system_score_codex":0.00006852745,"about_ca_system_score_gemma":0.0000058968876,"threshold_uncertainty_score":0.9982737},"labels":[],"label_agreement":null},{"id":"W4210727375","doi":"10.22376/ijpbs/lpr.2022.12.1.l154-169","title":"Isolation, Screening, Characterization And Application Of Biosurfactant By Achromobacter Xylos Strain GSR21 Producing Bacteria From Hydrocarbons Contaminated Soil","year":2022,"lang":"en","type":"article","venue":"International Journal of Life Science and Pharma Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Chemistry; Gas chromatography; Biodegradation; Hydrocarbon; Bacteria; Chromatography; Kerosene; Food science; Environmental chemistry; Microbiology; Biology; Organic chemistry","score_opus":0.02459123205912741,"score_gpt":0.3107077132732318,"score_spread":0.28611648121410443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210727375","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99628776,0.00003313802,0.0010194844,0.001961245,0.00018286353,0.00016312148,0.00029865277,0.0000043121454,0.000049412385],"genre_scores_gemma":[0.9991979,0.00010568109,0.00028092274,0.00021454686,0.000076331075,0.0000034293942,0.00007317039,0.0000059876443,0.000042040294],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9973368,0.00017892214,0.00043022644,0.00026788536,0.0015973324,0.00018883155],"domain_scores_gemma":[0.9989989,0.00008050171,0.00038195617,0.000091957976,0.00027810418,0.00016861298],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027968232,0.000084925465,0.00012881479,0.000209852,0.00027382627,0.00011732927,0.0005027462,0.000026688509,0.0007337747],"category_scores_gemma":[0.00023989685,0.00007600843,0.00002209216,0.0005047805,0.00050708634,0.0006659295,0.00035185253,0.00025362856,0.0000042662136],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011749795,0.00007886481,0.0548309,0.00000194613,0.000017291775,0.000001995938,0.0007228277,0.000013347753,0.9310612,0.0000047816184,0.0003041513,0.012845211],"study_design_scores_gemma":[0.0015809174,0.00030989773,0.5707105,0.000032138323,0.000014468022,0.000046300458,0.00071352185,0.014948977,0.40249154,0.0000829076,0.008845132,0.0002237021],"about_ca_topic_score_codex":0.00026850434,"about_ca_topic_score_gemma":0.000010501061,"teacher_disagreement_score":0.52856964,"about_ca_system_score_codex":0.00016105172,"about_ca_system_score_gemma":0.0001380396,"threshold_uncertainty_score":0.8034318},"labels":[],"label_agreement":null},{"id":"W4210740540","doi":"10.1016/j.chemosphere.2022.133840","title":"Pilot-scale production and in-situ application of petroleum-degrading enzyme cocktail from Alcanivorax borkumensis","year":2022,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"TechnoRem (Canada); York University; Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bioreactor; Lipase; Fermentation; Chemistry; Bioremediation; Alkane; Food science; Enzyme; Chromatography; Biochemistry; Bacteria; Biology; Organic chemistry","score_opus":0.007019277000217686,"score_gpt":0.19131522051451563,"score_spread":0.18429594351429796,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210740540","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974049,0.00008596629,0.000043501004,0.00036883214,0.00009536631,0.00015977793,0.00001746836,0.000019428822,0.0018047862],"genre_scores_gemma":[0.9988415,0.00002280131,0.0005776748,0.00009640009,0.000022775323,0.000013150861,0.00003102467,0.0000079258525,0.0003867319],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99920356,0.000030240753,0.00018556298,0.00028543596,0.00017815753,0.000117050535],"domain_scores_gemma":[0.9996758,0.000012756674,0.000111422596,0.00015634597,0.0000047307967,0.00003891357],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001503278,0.00008050135,0.00011418815,0.000008127721,0.00007656,0.0000075927696,0.00010114757,0.000020323141,0.00130677],"category_scores_gemma":[0.000014783075,0.000083684696,0.000018938821,0.00021886863,0.000066499735,0.00008036061,0.00013318834,0.00009645258,0.000032974338],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036887614,0.00007662958,0.124407634,0.0000046860005,0.0000026915075,4.0957448e-7,0.00021007382,0.00019516583,0.8686951,0.0000015761539,0.0023866296,0.0039825444],"study_design_scores_gemma":[0.0004987053,0.00007426614,0.19661917,0.000010874738,0.000013434457,0.0000039579527,0.0007796892,0.00094783714,0.7870609,0.00010613167,0.013671729,0.0002132941],"about_ca_topic_score_codex":0.0008077181,"about_ca_topic_score_gemma":0.0016863181,"teacher_disagreement_score":0.08163416,"about_ca_system_score_codex":0.00015927949,"about_ca_system_score_gemma":0.0000076546585,"threshold_uncertainty_score":0.9996062},"labels":[],"label_agreement":null},{"id":"W4210854866","doi":"10.1016/j.envres.2022.112926","title":"Surfactant-aided mycoremediation of soil contaminated with polycyclic aromatic hydrocarbons","year":2022,"lang":"en","type":"article","venue":"Environmental Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada; All India Council for Technical Education; Université de Sherbrooke","keywords":"Environmental remediation; Bioaugmentation; Microcosm; Environmental chemistry; Acenaphthene; Soil contamination; Bioremediation; Ecotoxicity; Contamination; Phenanthrene; Chemistry; Degradation (telecommunications); Biodegradation; Environmental science; Naphthalene; Polycyclic aromatic hydrocarbon; Soil water; Biology; Organic chemistry; Soil science; Ecology","score_opus":0.018785968233155793,"score_gpt":0.2523601567061374,"score_spread":0.2335741884729816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210854866","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99580365,0.00003841352,0.000009564217,0.0002086213,0.000059465012,0.00045785596,0.00004438792,0.00002346986,0.0033545601],"genre_scores_gemma":[0.99819934,0.000045221568,0.00009119838,0.00007155323,0.000012759369,0.000036209472,0.00011158418,0.000025202624,0.0014069156],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9966681,0.00042053903,0.00032303733,0.00039127213,0.0017104604,0.0004866168],"domain_scores_gemma":[0.9992024,0.00015867382,0.00014198861,0.00033538713,7.7618483e-7,0.00016079092],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00096154993,0.00015603808,0.00018750838,0.000119977776,0.00037004365,0.000016355478,0.00039095173,0.000050440187,0.0053544682],"category_scores_gemma":[0.000044815177,0.00013784364,0.0000511467,0.0005289541,0.00053964404,0.00013598296,0.0004594223,0.00040339012,0.0005215935],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014776172,0.00041826282,0.16248603,0.0000030765734,0.000018277902,0.000018067918,0.0006259074,0.00010851813,0.8322359,0.0000025981144,0.0004990711,0.0034365477],"study_design_scores_gemma":[0.0022478916,0.001521772,0.67783403,0.000015765565,0.000024381563,0.00003883847,0.0028301962,0.0022798681,0.30821854,0.00048359815,0.0040094033,0.0004957347],"about_ca_topic_score_codex":0.00048979826,"about_ca_topic_score_gemma":0.00018582796,"teacher_disagreement_score":0.52401733,"about_ca_system_score_codex":0.0006553339,"about_ca_system_score_gemma":0.000029931147,"threshold_uncertainty_score":0.99555475},"labels":[],"label_agreement":null},{"id":"W4213022912","doi":"10.2139/ssrn.3989404","title":"Biodegradation of 1,4-Dioxane by a Native Digestate Microbial Community","year":2021,"lang":"en","type":"article","venue":"SSRN Electronic Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Digestate; Biodegradation; 1,4-Dioxane; Microbial population biology; Chemistry; Environmental chemistry; Environmental science; Organic chemistry; Methane; Bacteria; Biology; Anaerobic digestion","score_opus":0.006283479393021105,"score_gpt":0.21087819817419245,"score_spread":0.20459471878117136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213022912","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99735326,0.0001875061,0.0005715683,0.0005384029,0.000086955944,0.000056310837,0.000037179183,0.000009453959,0.0011593708],"genre_scores_gemma":[0.99659085,0.0014256538,0.00012664334,0.00011950358,0.000019503299,3.5372756e-7,0.000051980533,0.000007511926,0.0016579817],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99844617,0.0002767131,0.00024880425,0.000109015884,0.00020194225,0.00071737263],"domain_scores_gemma":[0.9995568,0.000033980137,0.00019174963,0.00012367094,0.000036686888,0.00005711317],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00092516124,0.00009940403,0.00012751888,0.00002293916,0.00018780932,0.000022716611,0.00019781305,0.000054952507,0.00062292203],"category_scores_gemma":[0.00006702964,0.00008838927,0.00006530244,0.000239821,0.00010672297,0.00015738123,0.00007811563,0.00096628955,0.00006481921],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028640354,0.0001735105,0.0048260842,0.0000023780447,0.000034956756,0.0000013020372,0.00038620274,0.000006691593,0.9835211,0.00023261728,0.001792158,0.0089943735],"study_design_scores_gemma":[0.0016450068,0.0003964836,0.0074994857,0.000024770303,0.000040977753,0.0003751391,0.0030193888,0.000028736442,0.95976806,0.010568124,0.016267778,0.00036605867],"about_ca_topic_score_codex":0.00035776192,"about_ca_topic_score_gemma":0.0029333725,"teacher_disagreement_score":0.023753034,"about_ca_system_score_codex":0.0006129165,"about_ca_system_score_gemma":0.00029317278,"threshold_uncertainty_score":0.68205595},"labels":[],"label_agreement":null},{"id":"W4213037965","doi":"10.3390/en15041561","title":"Bioremediation of Agriculture Soil Contaminated by Organic Pollutants","year":2022,"lang":"en","type":"article","venue":"Energies","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Environmental chemistry; Environmental science; Pollutant; Soil contamination; Bioremediation; Contamination; Organic matter; Soil water; Pollution; Environmental engineering; Chemistry; Soil science","score_opus":0.0023338787045437213,"score_gpt":0.1581637814800794,"score_spread":0.15582990277553568,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213037965","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982958,0.00006784441,0.0000038954986,0.00024786755,0.0001878254,0.00006494267,0.0001862095,0.000033544336,0.0009120976],"genre_scores_gemma":[0.9975814,0.00003818447,0.00003190887,0.00019771454,0.000013316984,0.0000030985923,0.00007080119,0.0000058584023,0.002057678],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999243,0.000053185187,0.00015524277,0.00014584718,0.00027472075,0.00012798703],"domain_scores_gemma":[0.99974114,0.000013055044,0.00011318549,0.000091177906,0.0000065740296,0.000034897086],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000105420426,0.0000785994,0.00009178091,0.00001984895,0.00010754059,0.0000071606746,0.00016072467,0.00003344436,0.010842333],"category_scores_gemma":[0.000020661359,0.00006397846,0.000027873073,0.0003382235,0.000060482344,0.00006912886,0.00014945277,0.00006596479,0.00007256849],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000067632745,0.000045145953,0.0055280454,0.0000013142466,0.0000047090402,8.030245e-7,0.0002662482,0.0004550276,0.95626277,0.000009388029,0.036637284,0.0007824988],"study_design_scores_gemma":[0.0003118262,0.000068409594,0.0354329,0.0000013956086,0.000007408317,0.000002619731,0.00052468485,0.000044265453,0.9388188,0.000012580314,0.02464531,0.00012977135],"about_ca_topic_score_codex":0.00015489013,"about_ca_topic_score_gemma":0.00012512525,"teacher_disagreement_score":0.029904855,"about_ca_system_score_codex":0.00010045512,"about_ca_system_score_gemma":0.00000901169,"threshold_uncertainty_score":0.9900619},"labels":[],"label_agreement":null},{"id":"W4214531183","doi":"10.1139/cjm-47-5-448","title":"Purification, cloning, and sequencing of an enzyme mediating the reductive dechlorination of tetrachloroethylene (PCE) from &lt;i&gt;Clostridium bifermentans &lt;/i&gt;DPH-1","year":2001,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Tetrachloroethylene; Reductive dechlorination; Cloning (programming); Chemistry; Enzyme; Corrinoid; Molecular biology; Microbiology; Biochemistry; Trichloroethylene; Biology; Gene; Environmental chemistry; Biodegradation; Organic chemistry","score_opus":0.012380671813315787,"score_gpt":0.2099708156899623,"score_spread":0.1975901438766465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214531183","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99773747,0.00047019107,0.000056049033,0.00082572736,0.00035604826,0.00014660489,0.00020194275,0.0000034136117,0.00020255701],"genre_scores_gemma":[0.99836904,0.00022726742,0.0010378803,0.00013742999,0.00011872052,8.130285e-7,0.00005384973,0.000010654806,0.000044346383],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99856955,0.0001938414,0.00064345164,0.00021163466,0.00010411217,0.00027742487],"domain_scores_gemma":[0.99857026,0.00011278404,0.0007720514,0.0001823869,0.000113831426,0.00024867762],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007242474,0.0001455503,0.00025857796,0.0001463109,0.00014319437,0.000016290538,0.00035107875,0.00015412005,0.00067682547],"category_scores_gemma":[0.0002221493,0.00011452984,0.00005920992,0.00026381298,0.00057328196,0.0002093259,0.000029530005,0.00018381988,0.000008277894],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023354803,0.000017755608,0.010055315,0.0000028405434,0.000025617524,0.000011926458,0.0016763697,0.000059583945,0.9860276,0.000035446268,0.0005381867,0.0015259853],"study_design_scores_gemma":[0.0005146829,0.00024278635,0.050591797,0.00003299463,0.00004789561,0.00023975519,0.00069917465,0.000038422462,0.9403003,0.00014912538,0.006986449,0.0001566089],"about_ca_topic_score_codex":0.0025485998,"about_ca_topic_score_gemma":0.020781716,"teacher_disagreement_score":0.045727313,"about_ca_system_score_codex":0.00038351156,"about_ca_system_score_gemma":0.000315413,"threshold_uncertainty_score":0.99708647},"labels":[],"label_agreement":null},{"id":"W4214615071","doi":"10.1016/j.marpolbul.2022.113464","title":"Natural attenuation of oil in marine environments: A review","year":2022,"lang":"en","type":"review","venue":"Marine Pollution Bulletin","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Fisheries and Oceans Canada; McGill University","funders":"","keywords":"Environmental science; Oil spill; Microplastics; Dispersant; Attenuation; Natural (archaeology); Biodegradation; Biochemical engineering; Petroleum engineering; Environmental engineering; Dispersion (optics); Ecology; Engineering; Oceanography; Geology; Biology","score_opus":0.017878424794963144,"score_gpt":0.25144111233980004,"score_spread":0.2335626875448369,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214615071","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000039758164,0.98721194,0.0000010107107,0.0010795691,0.00029923077,0.00060401426,0.00008357873,0.000022498089,0.010658407],"genre_scores_gemma":[0.00003297802,0.9889125,0.00022148657,0.00066350756,0.000032435324,0.00006306669,0.0008583559,0.00002731473,0.009188303],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99740225,0.0003686156,0.0009812296,0.0004769562,0.0004927728,0.0002781607],"domain_scores_gemma":[0.9988486,0.00004971986,0.0006649587,0.000369977,0.0000027895205,0.00006393408],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0007073756,0.0003389418,0.00094419176,0.00011895906,0.000052964,0.000007980544,0.00037571194,0.00012716482,0.1575384],"category_scores_gemma":[0.00016023156,0.0002976712,0.00027803387,0.00055001094,0.00010438492,0.00003776298,0.0011519648,0.00041966356,0.0019261073],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006405647,0.00010842692,0.00013899352,0.003476174,0.000013218695,0.0000061953583,0.0000066753287,0.000001540225,0.000027784474,0.00000655028,0.010574928,0.98563313],"study_design_scores_gemma":[0.00021573529,0.000024813384,0.00061945483,0.0017396309,0.00010543599,0.00001824823,0.000002331885,0.0000016881444,0.0000042314678,0.0000034558032,0.99698883,0.00027611983],"about_ca_topic_score_codex":0.0004255587,"about_ca_topic_score_gemma":0.00010299528,"teacher_disagreement_score":0.98641396,"about_ca_system_score_codex":0.0007582729,"about_ca_system_score_gemma":0.000029491082,"threshold_uncertainty_score":0.99994755},"labels":[],"label_agreement":null},{"id":"W4221116496","doi":"10.1002/9781118960608.gbm02023","title":"<i>Oleiharenicola</i>","year":2022,"lang":"en","type":"other","venue":"Bergey's Manual of Systematics of Archaea and Bacteria","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Bacteria; Genus; 16S ribosomal RNA; Botany; Biology; Chemistry; Food science; Paleontology","score_opus":0.006749653096179367,"score_gpt":0.21149836831880908,"score_spread":0.20474871522262972,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4221116496","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40766492,0.00061079307,0.000028095545,0.00016962981,0.0014140324,0.002212792,0.0028389052,0.000113445436,0.58494735],"genre_scores_gemma":[0.5187903,0.00073191075,0.0057507004,0.00016207155,0.00021168862,0.00003400207,0.0004570554,0.0004275637,0.4734347],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985408,0.000100092904,0.0005689259,0.00024036775,0.00038323505,0.00016658512],"domain_scores_gemma":[0.99876344,0.000037036792,0.0007976645,0.00031334226,0.000007733474,0.00008077059],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00029228107,0.00021395083,0.00058804546,0.00009175327,0.000026917174,0.000007937048,0.00029463708,0.00013383714,0.04033666],"category_scores_gemma":[0.00002365926,0.00017872629,0.0000886387,0.00011210013,0.00020269881,0.000036241323,0.00049462455,0.00008657661,0.00010038785],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006126941,0.00032004612,0.015485293,0.00944147,0.00025943428,0.000011708831,0.0014439507,0.0000016814964,0.21836324,0.00035187343,0.75352424,0.0007357707],"study_design_scores_gemma":[0.0013652366,0.000544216,0.013236351,0.0020122253,0.00029054077,0.00002924924,0.000664932,0.000024690231,0.009550135,0.00011889065,0.9710678,0.0010957173],"about_ca_topic_score_codex":0.00028932508,"about_ca_topic_score_gemma":0.00022592112,"teacher_disagreement_score":0.21754354,"about_ca_system_score_codex":0.000032834487,"about_ca_system_score_gemma":0.000013498247,"threshold_uncertainty_score":0.9605406},"labels":[],"label_agreement":null},{"id":"W4223516534","doi":"10.1101/2022.04.11.487956","title":"Transient Oxygen Exposure Causes Profound and Lasting Changes to a Benzene-Degrading Methanogenic Community","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Benzene; Methanogenesis; Environmental chemistry; Chemistry; Oxygen; Anaerobic exercise; Archaea; Biodegradation; Microbial population biology; Anoxic waters; Fermentation; Enrichment culture; Bacteria; Microbiology; Food science; Biology; Organic chemistry; Biochemistry; Methane; Physiology","score_opus":0.025034946430300818,"score_gpt":0.22812201868075188,"score_spread":0.20308707225045106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4223516534","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996612,0.0003221423,0.000082019855,0.0006289398,0.00065792183,0.0010601181,0.00037398862,0.00023873927,0.000024125808],"genre_scores_gemma":[0.9958244,0.00016503103,0.002776759,0.00086789473,0.000120000215,0.00014193307,0.0000010704166,0.00008758377,0.000015337093],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99705523,0.0005068358,0.000431526,0.0008592668,0.00053284946,0.00061427],"domain_scores_gemma":[0.9982726,0.00010014912,0.00029599277,0.0008680299,0.000050387083,0.00041285416],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013201546,0.00053077907,0.0004860303,0.00017627655,0.00066981674,0.00019616038,0.00071077887,0.00028862417,0.00086184486],"category_scores_gemma":[0.00018892287,0.0005550168,0.00009602743,0.0006101005,0.00013617576,0.00011809887,0.001779314,0.0010443119,0.00007473011],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023934255,0.00010952754,0.020912113,0.00013690436,0.00006254809,0.00001447433,0.00030622748,0.00008811044,0.97792363,0.000008142644,0.00040338628,0.000011020993],"study_design_scores_gemma":[0.0006305913,0.00029011825,0.49101344,0.00023512101,0.00017178667,9.721338e-8,0.00011299413,0.000092773946,0.47730136,0.0000014289762,0.028672548,0.0014777348],"about_ca_topic_score_codex":0.00058985304,"about_ca_topic_score_gemma":0.00048598714,"teacher_disagreement_score":0.5006222,"about_ca_system_score_codex":0.00056775415,"about_ca_system_score_gemma":0.00009542729,"threshold_uncertainty_score":0.9996901},"labels":[],"label_agreement":null},{"id":"W4224041052","doi":"10.1128/aem.00581-22","title":"Correction for Picott et al., “Heterologous Expression of Active <i>Dehalobacter</i> Respiratory Reductive Dehalogenases in Escherichia coli”","year":2022,"lang":"en","type":"erratum","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Heterologous; Escherichia coli; Biology; Heterologous expression; Microbiology; Genetics; Recombinant DNA; Gene","score_opus":0.0077191674917419205,"score_gpt":0.20883550436789317,"score_spread":0.20111633687615124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4224041052","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9888518,0.00027128035,0.000009092649,0.00012381976,0.0046907472,0.0011187094,0.0029207508,0.000023099234,0.001990734],"genre_scores_gemma":[0.9780446,0.001395672,0.0002770233,0.0077134296,0.000099283636,0.0002199821,0.009112498,0.00008184623,0.0030556626],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980018,0.00018326848,0.00047948438,0.00084520975,0.00009910113,0.00039112577],"domain_scores_gemma":[0.99910325,0.00010724688,0.00046941117,0.0002415937,0.0000022651861,0.000076262804],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00020762646,0.0003978233,0.00053453125,0.000088736226,0.00012765799,0.000008714378,0.00024311354,0.00046445988,0.0012693127],"category_scores_gemma":[0.000016326036,0.00038429024,0.00010078338,0.000103082915,0.00054903433,0.00006788792,0.00048213292,0.00065928075,0.000021093687],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023976227,0.0002451204,0.000626926,0.0000101155065,0.000014693057,0.000001626334,0.00024331309,0.000017674376,0.69542915,0.0000010189365,0.30194572,0.0012248742],"study_design_scores_gemma":[0.0011379382,0.0005155473,0.023220498,0.000028557411,0.000036822876,0.000015898982,0.00069258263,0.000006408019,0.25135887,0.00002264151,0.7224508,0.000513441],"about_ca_topic_score_codex":0.00008659949,"about_ca_topic_score_gemma":0.00014841362,"teacher_disagreement_score":0.44407028,"about_ca_system_score_codex":0.00041672372,"about_ca_system_score_gemma":0.000027838087,"threshold_uncertainty_score":0.9998609},"labels":[],"label_agreement":null},{"id":"W4224935872","doi":"10.18280/ijdne.170214","title":"Experimental Approach for Treatment of Contaminated Soil with Crude Oil","year":2022,"lang":"en","type":"article","venue":"International Journal of Design & Nature and Ecodynamics","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Manure; Contamination; Soil contamination; Environmental science; Crude oil; Soil test; Fertilizer; Pollution; Environmental pollution; Environmental chemistry; Agronomy; Chemistry; Soil water; Biology; Soil science; Engineering; Environmental protection; Ecology","score_opus":0.010339820936411403,"score_gpt":0.23445130593993724,"score_spread":0.22411148500352585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4224935872","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992246,0.000278071,0.006360287,0.00019840861,0.00028285792,0.000107535925,0.00008405511,0.0000039085535,0.00043888454],"genre_scores_gemma":[0.99152833,0.000081951985,0.007930076,0.00012311724,0.000039014696,0.00000499851,0.000029906694,0.000007165833,0.00025542217],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992623,0.00003443832,0.00021762957,0.00010353596,0.0002978578,0.00008427531],"domain_scores_gemma":[0.9995579,0.000041542105,0.00026942004,0.000042806423,0.000044293705,0.00004400206],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015518261,0.00008695073,0.00013945051,0.000060379003,0.000055295925,0.00001569145,0.000174864,0.000046879926,0.0001659368],"category_scores_gemma":[0.0000078695875,0.000063342195,0.000057149908,0.00006178691,0.00005221478,0.000091135196,0.000037775866,0.00008105025,3.785109e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004325026,0.0022090208,0.0089568095,0.000010580198,0.00049477495,0.000063846965,0.0020354097,0.019425867,0.93942213,0.0002182983,0.0016459625,0.021192271],"study_design_scores_gemma":[0.032637887,0.020983232,0.016826946,0.000078716206,0.00039622805,0.0029821612,0.00691539,0.14980109,0.72335905,0.00042853592,0.04416255,0.0014282322],"about_ca_topic_score_codex":0.000012931555,"about_ca_topic_score_gemma":0.000007861434,"teacher_disagreement_score":0.2160631,"about_ca_system_score_codex":0.00027011204,"about_ca_system_score_gemma":0.000027775353,"threshold_uncertainty_score":0.25830197},"labels":[],"label_agreement":null},{"id":"W4226022467","doi":"10.2139/ssrn.4045867","title":"Biodegradation of 1,4-Dioxane by a Native Digestate Microbial Community","year":2022,"lang":"en","type":"article","venue":"SSRN Electronic Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Digestate; Biodegradation; 1,4-Dioxane; Microbial population biology; Chemistry; Environmental science; Environmental chemistry; Biology; Bacteria; Organic chemistry; Methane; Anaerobic digestion","score_opus":0.005866749831653601,"score_gpt":0.20291785844037236,"score_spread":0.19705110860871874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4226022467","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99820405,0.00009677526,0.00022788366,0.00044182112,0.00010256365,0.000101069025,0.00008207689,0.000011081687,0.0007326708],"genre_scores_gemma":[0.9981812,0.00034914984,0.00004176768,0.00012441796,0.000013304804,0.0000015584574,0.000051574374,0.000008167279,0.001228862],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982447,0.00039765044,0.0002422578,0.00010042303,0.00028820217,0.00072676595],"domain_scores_gemma":[0.99955374,0.000029840223,0.00024757988,0.00010929934,0.000012821698,0.000046736957],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0016328833,0.00009435669,0.00011283411,0.000039522038,0.0005036197,0.000013501996,0.0003383615,0.000025583982,0.0013350229],"category_scores_gemma":[0.000025956753,0.000087646906,0.000060111513,0.00025464056,0.0000975063,0.00012503701,0.00016860626,0.0014385857,0.000029448596],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010829423,0.00031900124,0.0068493644,0.0000020219438,0.000043388605,7.721922e-7,0.0010647329,0.00008386023,0.975231,0.00033132843,0.0052626,0.010703624],"study_design_scores_gemma":[0.011081901,0.0076905023,0.027008276,0.000035295256,0.00020393786,0.0018521094,0.03687182,0.00041410976,0.6129508,0.06166674,0.23787159,0.0023528931],"about_ca_topic_score_codex":0.0007782692,"about_ca_topic_score_gemma":0.0010408872,"teacher_disagreement_score":0.3622802,"about_ca_system_score_codex":0.0012494152,"about_ca_system_score_gemma":0.00018768689,"threshold_uncertainty_score":0.9995779},"labels":[],"label_agreement":null},{"id":"W4226402718","doi":"10.2139/ssrn.4045861","title":"Biodegradation of 1,4-Dioxane by a Native Digestate Microbial Community","year":2022,"lang":"en","type":"article","venue":"SSRN Electronic Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Digestate; Biodegradation; 1,4-Dioxane; Microbial population biology; Waste management; Chemistry; Environmental science; Engineering; Biology; Bacteria; Methane; Organic chemistry; Anaerobic digestion","score_opus":0.005866749831653601,"score_gpt":0.20291785844037236,"score_spread":0.19705110860871874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4226402718","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99820405,0.00009677526,0.00022788366,0.00044182112,0.00010256365,0.000101069025,0.00008207689,0.000011081687,0.0007326708],"genre_scores_gemma":[0.9981812,0.00034914984,0.00004176768,0.00012441796,0.000013304804,0.0000015584574,0.000051574374,0.000008167279,0.001228862],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982447,0.00039765044,0.0002422578,0.00010042303,0.00028820217,0.00072676595],"domain_scores_gemma":[0.99955374,0.000029840223,0.00024757988,0.00010929934,0.000012821698,0.000046736957],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0016328833,0.00009435669,0.00011283411,0.000039522038,0.0005036197,0.000013501996,0.0003383615,0.000025583982,0.0013350229],"category_scores_gemma":[0.000025956753,0.000087646906,0.000060111513,0.00025464056,0.0000975063,0.00012503701,0.00016860626,0.0014385857,0.000029448596],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010829423,0.00031900124,0.0068493644,0.0000020219438,0.000043388605,7.721922e-7,0.0010647329,0.00008386023,0.975231,0.00033132843,0.0052626,0.010703624],"study_design_scores_gemma":[0.011081901,0.0076905023,0.027008276,0.000035295256,0.00020393786,0.0018521094,0.03687182,0.00041410976,0.6129508,0.06166674,0.23787159,0.0023528931],"about_ca_topic_score_codex":0.0007782692,"about_ca_topic_score_gemma":0.0010408872,"teacher_disagreement_score":0.3622802,"about_ca_system_score_codex":0.0012494152,"about_ca_system_score_gemma":0.00018768689,"threshold_uncertainty_score":0.9995779},"labels":[],"label_agreement":null},{"id":"W4229524083","doi":"10.22215/etd/2009-09295","title":"The efficacy of different bioremediation strategies in removing mutagenic hazard from contaminated soil","year":2009,"lang":"en","type":"dissertation","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Library and Archives Canada","funders":"Health Canada","keywords":"Bioremediation; Environmental science; Contamination; Biology; Ecology","score_opus":0.0066164946212141675,"score_gpt":0.22867635937250377,"score_spread":0.2220598647512896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4229524083","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99183834,0.00011372855,0.000005811512,0.000072851915,0.0004097266,0.00035801975,0.000019885603,0.000030239047,0.0071514132],"genre_scores_gemma":[0.9973968,0.00026925057,0.000038667193,0.0000366849,0.000034974575,0.0000032709218,0.000803151,0.000013556106,0.0014035929],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99835616,0.00009733711,0.0005746788,0.00033941836,0.00039194233,0.00024043462],"domain_scores_gemma":[0.9991076,0.00018228144,0.0003898908,0.00024958447,0.000018137425,0.00005251554],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001841489,0.0002486062,0.0002889605,0.000058254634,0.0000814817,0.00007136571,0.00032209684,0.0002676493,0.00090031023],"category_scores_gemma":[0.000098405195,0.00016185819,0.00009524221,0.00021781107,0.000072774135,0.00011266554,0.00003024091,0.00021674056,0.00010890184],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025238385,0.00020494455,0.010839836,0.000016180531,0.0000404515,0.000004481376,0.0014048283,0.00006829421,0.94277567,0.00008544734,0.0008974181,0.04341004],"study_design_scores_gemma":[0.00060012867,0.000048005862,0.8658769,0.00005536657,0.000033538458,1.305336e-7,0.0011185561,0.00025689547,0.1314055,0.00027020316,0.00012312303,0.00021164761],"about_ca_topic_score_codex":0.001701299,"about_ca_topic_score_gemma":0.10117808,"teacher_disagreement_score":0.8550371,"about_ca_system_score_codex":0.00017801963,"about_ca_system_score_gemma":0.00004487681,"threshold_uncertainty_score":0.9857766},"labels":[],"label_agreement":null},{"id":"W4230522830","doi":"10.7287/peerj.preprints.27696v1","title":"Bioremediation of engine-oil contaminated soil using local residual organic matter","year":2019,"lang":"en","type":"preprint","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Bioremediation; Environmental remediation; Organic matter; Environmental science; Manure; Waste management; Environmental engineering; Contamination; Environmental chemistry; Pulp and paper industry; Chemistry; Agronomy; Biology; Ecology","score_opus":0.010888090584295533,"score_gpt":0.21440767564778382,"score_spread":0.20351958506348827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4230522830","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99235594,0.00001716638,0.0022919383,0.00020667844,0.0006715303,0.00018668004,0.000076891694,0.000042364376,0.004150827],"genre_scores_gemma":[0.9965246,0.000047752364,0.00079511345,0.0003244786,0.000059494192,0.0000012566409,0.00016641825,0.000026630018,0.0020542594],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983033,0.000074492134,0.0004928842,0.0004613442,0.00040668962,0.00026131215],"domain_scores_gemma":[0.99912935,0.000030422647,0.00033625963,0.0003898401,0.000033363853,0.00008077908],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000262033,0.00026165557,0.0003262138,0.000076287615,0.000028950124,0.00002619701,0.00031055446,0.00041680387,0.023981735],"category_scores_gemma":[0.00002456424,0.00022686791,0.00008096554,0.00017239904,0.00016817737,0.0000829067,0.00069117476,0.00027957401,0.0025042149],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027416849,0.0000840908,0.049358808,0.00011893747,0.000031672404,0.000002368886,0.00027665577,0.0046252785,0.9382116,0.0000017633536,0.004249374,0.003012031],"study_design_scores_gemma":[0.00084848556,0.00004971367,0.06418373,0.00012035047,0.000087940134,0.0000058232,0.000185147,0.016991138,0.91600347,0.000027576618,0.0007764564,0.0007201904],"about_ca_topic_score_codex":0.0009252712,"about_ca_topic_score_gemma":0.00035472593,"teacher_disagreement_score":0.022208152,"about_ca_system_score_codex":0.00030764425,"about_ca_system_score_gemma":0.00007151541,"threshold_uncertainty_score":0.9982725},"labels":[],"label_agreement":null},{"id":"W4232258297","doi":"10.1016/b978-0-12-809413-6.00012-6","title":"Bioremediation of Oil Spills on Land","year":2016,"lang":"en","type":"book-chapter","venue":"Elsevier eBooks","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Bioremediation; Biostimulation; Environmental science; Bioaugmentation; Biodegradation; Contamination; Waste management; Environmental remediation; Soil contamination; Microorganism; Petroleum; Environmental chemistry; Environmental engineering; Soil water; Chemistry; Ecology; Geology; Soil science; Engineering","score_opus":0.009801468505124325,"score_gpt":0.2043281209300316,"score_spread":0.1945266524249073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4232258297","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.003111901,0.000030727166,3.7138184e-7,0.0001024887,0.00032803728,0.00013173786,0.00014218058,0.00002472769,0.99612784],"genre_scores_gemma":[0.013613837,0.00017818018,0.000060693612,0.00034185938,0.00016540478,0.0000022131571,0.000021505888,0.00003211069,0.9855842],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987126,0.000016073216,0.00035612786,0.000329371,0.0004066627,0.00017919559],"domain_scores_gemma":[0.99919015,0.000037459133,0.00033944796,0.00032210123,0.000015443482,0.000095382726],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00016876122,0.00024991322,0.00027913923,0.00006168458,0.000035950936,0.000009157437,0.00020660464,0.00026378228,0.0060567786],"category_scores_gemma":[0.000018234445,0.00017492671,0.00012368904,0.000010902162,0.00019874271,0.000028745819,0.000093799405,0.00013137718,0.0041829096],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019301238,0.000009035977,0.00028362658,0.000016776545,0.000014820973,0.0000028690135,0.000041201758,2.6499214e-7,0.017492244,0.0002818891,0.00067270163,0.9811653],"study_design_scores_gemma":[0.000314276,0.00008212018,0.0005042237,0.00020610497,0.000024615832,0.0000012725808,5.383351e-7,6.423655e-7,0.008529496,0.0007586846,0.9893024,0.00027562745],"about_ca_topic_score_codex":8.495256e-7,"about_ca_topic_score_gemma":0.000042956508,"teacher_disagreement_score":0.9886297,"about_ca_system_score_codex":0.00012091167,"about_ca_system_score_gemma":0.00001950085,"threshold_uncertainty_score":0.99659246},"labels":[],"label_agreement":null},{"id":"W4233405667","doi":"10.1515/iupac.76.0334","title":"Phase III Reaction (of Biotransformation)","year":2016,"lang":"en","type":"dataset","venue":"IUPAC Standards Online","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Toxicokinetics; Glossary; Hazard; Relation (database); Toxicology; Computer science; Medicine; Chemistry; Pharmacology; Data mining; Biology; Philosophy; Organic chemistry; Linguistics","score_opus":0.010939639685209257,"score_gpt":0.3548601986888041,"score_spread":0.3439205590035948,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4233405667","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00507943,0.000022705257,0.00010860349,0.0002941494,0.0004521228,0.00026238748,0.99357533,0.00002560472,0.00017966703],"genre_scores_gemma":[0.001443648,0.00078662403,0.000031530846,0.00014379484,0.0001385619,0.0000018172792,0.9972673,0.000010766879,0.00017594655],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981761,0.00004364471,0.0005241546,0.00027060305,0.0007639988,0.0002214966],"domain_scores_gemma":[0.99908966,0.000023376579,0.00036688542,0.0003563412,0.00005436716,0.0001093642],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000383594,0.00023175564,0.00031884995,0.000083548235,0.00006097291,0.000014389934,0.0002540736,0.00026158552,0.019214494],"category_scores_gemma":[0.00007607348,0.00016704565,0.00010633461,0.00019233214,0.00018659618,0.00019460377,0.00006767447,0.00017161535,0.000035597976],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018416325,0.00037578196,0.000003807221,0.000028034863,0.00001763126,0.0000024287854,0.000015749076,2.665512e-7,0.03677819,6.694884e-7,0.9509344,0.01165886],"study_design_scores_gemma":[0.0025325723,0.00020314081,0.000031150026,0.000077804485,0.000042056676,0.0000040529785,0.000009513688,0.0000027090703,0.007831154,0.000011823826,0.98903763,0.00021637691],"about_ca_topic_score_codex":0.00023239381,"about_ca_topic_score_gemma":0.00073262316,"teacher_disagreement_score":0.038103227,"about_ca_system_score_codex":0.00036541012,"about_ca_system_score_gemma":0.000093243885,"threshold_uncertainty_score":0.98168206},"labels":[],"label_agreement":null},{"id":"W4234632520","doi":"10.1139/cjce-28-s1-131","title":"Bioremediation of diesel fuel contaminated soil","year":2001,"lang":"en","type":"article","venue":"Canadian Journal of Civil Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Bioremediation; Environmental science; Soil contamination; Diesel fuel; Contamination; Waste management; Environmental engineering; Soil water; Engineering; Soil science; Ecology; Biology","score_opus":0.005848581998939446,"score_gpt":0.16687496280598735,"score_spread":0.1610263808070479,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4234632520","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953742,0.00017303997,0.0007303421,0.00019906691,0.00045978872,0.000048165122,0.00000991291,0.0000060209763,0.0029994876],"genre_scores_gemma":[0.99964905,0.00006507111,0.00009063443,0.000045475736,0.000054384374,1.7329457e-7,0.0000021065762,0.0000075625003,0.00008555097],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99933755,0.000009540105,0.00027200862,0.000058744183,0.00013907997,0.00018306014],"domain_scores_gemma":[0.99945515,0.000017630646,0.00013892377,0.00006551613,0.000033528697,0.00028925604],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00019993554,0.0000753207,0.00012533228,0.00012470913,0.00002051525,0.000011509545,0.00013673595,0.000051028714,0.0017761663],"category_scores_gemma":[0.0001228455,0.00006999032,0.000047700803,0.00024132445,0.000042364278,0.0001388386,0.0000080647715,0.000093405215,0.000027639877],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023424023,0.00003442491,0.24874644,0.000047071884,0.00005938166,0.00018599293,0.0016306762,0.03436924,0.7007246,0.00006315563,0.01009846,0.004017138],"study_design_scores_gemma":[0.0019290785,0.00030591874,0.810631,0.00021695255,0.00006410049,0.00028071576,0.0002644489,0.009160107,0.049732372,0.00009263427,0.12668405,0.0006386504],"about_ca_topic_score_codex":0.0011943835,"about_ca_topic_score_gemma":0.14282864,"teacher_disagreement_score":0.6509922,"about_ca_system_score_codex":0.00016027162,"about_ca_system_score_gemma":0.00007426603,"threshold_uncertainty_score":0.9991363},"labels":[],"label_agreement":null},{"id":"W4235066841","doi":"10.1515/iupac.76.0332","title":"Phase I Reaction (of Biotransformation)","year":2016,"lang":"en","type":"dataset","venue":"IUPAC Standards Online","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Toxicokinetics; Glossary; Hazard; Relation (database); Toxicology; Computer science; Medicine; Chemistry; Pharmacology; Data mining; Biology; Philosophy; Organic chemistry; Linguistics","score_opus":0.011285624644237487,"score_gpt":0.36159698232012694,"score_spread":0.35031135767588945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4235066841","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0041136723,0.000021234879,0.00008004293,0.00031271583,0.00042068685,0.00022185947,0.9946509,0.000023276203,0.00015562927],"genre_scores_gemma":[0.00084035937,0.000701247,0.00003449548,0.00013407547,0.00012701405,0.0000014926123,0.9980183,0.000010107265,0.00013290258],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983233,0.00004347715,0.00045687152,0.00024992018,0.00072277855,0.00020364506],"domain_scores_gemma":[0.99917114,0.000022750668,0.00032069482,0.00033535325,0.00005032793,0.00009975911],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00034787017,0.00021336318,0.00027470503,0.000077220335,0.00005138592,0.000013017984,0.00023655157,0.00024290594,0.018752625],"category_scores_gemma":[0.00009546279,0.0001527448,0.000098611075,0.00017916512,0.0001719484,0.00017701802,0.00006064563,0.00015717327,0.000041738713],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000105097155,0.00037400253,0.000005611673,0.000030668,0.000014539546,0.000002213128,0.00001121251,2.2112958e-7,0.037094552,5.526307e-7,0.9501859,0.012175444],"study_design_scores_gemma":[0.0013822453,0.00021405294,0.00004362212,0.00007251288,0.000035922607,0.0000037948275,0.000006781637,0.000002115872,0.0077790427,0.00001310953,0.9902488,0.00019798688],"about_ca_topic_score_codex":0.00015107945,"about_ca_topic_score_gemma":0.00056373124,"teacher_disagreement_score":0.040062927,"about_ca_system_score_codex":0.00033926734,"about_ca_system_score_gemma":0.00008432369,"threshold_uncertainty_score":0.98214436},"labels":[],"label_agreement":null},{"id":"W4236274993","doi":"10.1289/ehp.00108709","title":"Chemical characterization and bioactivity of polycyclic aromatic hydrocarbons from non-oxidative thermal treatment of pyrene-contaminated soil at 250-1,000 degrees C.","year":2000,"lang":"en","type":"article","venue":"Environmental Health Perspectives","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institute of Environmental Health Sciences","keywords":"Pyrene; Chemistry; Environmental chemistry; Polycyclic aromatic hydrocarbon; Hydrocarbon; Soil contamination; Organic chemistry; Soil water","score_opus":0.0070329333368779135,"score_gpt":0.21719010897005586,"score_spread":0.21015717563317796,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236274993","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986588,0.00016541842,0.000015361436,0.00017155654,0.000023561632,0.00038614092,0.00030950687,0.000015192977,0.0002544604],"genre_scores_gemma":[0.99830645,0.0010094858,0.00016580448,0.00003703144,0.000021869502,0.00000877463,0.00017730708,0.000015309053,0.00025799187],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986816,0.00011002152,0.00034025102,0.00040291648,0.00022081255,0.0002444205],"domain_scores_gemma":[0.99936444,0.00004998904,0.00025388369,0.00018608673,4.3123407e-7,0.00014520263],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00006513687,0.00021950273,0.00034393003,0.00003407952,0.000099760844,0.000005497716,0.00008774745,0.000088109824,0.0019457513],"category_scores_gemma":[0.0000035235412,0.00019001713,0.00006416353,0.00009075299,0.0005569143,0.00015083145,0.000049522136,0.000055472596,0.00006397086],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013980918,0.0008247046,0.06910971,0.0000037318819,0.000031569572,8.7637494e-7,0.010449037,0.0000021748579,0.9049879,3.022866e-7,0.0000026500907,0.014447538],"study_design_scores_gemma":[0.00072480796,0.00032063722,0.6150081,0.000014534732,0.000014379925,0.0000018108215,0.0007796118,0.00030605882,0.38265347,0.000005329631,0.000048300346,0.00012295508],"about_ca_topic_score_codex":0.001980625,"about_ca_topic_score_gemma":0.0001588527,"teacher_disagreement_score":0.5458984,"about_ca_system_score_codex":0.00072404795,"about_ca_system_score_gemma":0.000011879279,"threshold_uncertainty_score":0.99896663},"labels":[],"label_agreement":null},{"id":"W4236653713","doi":"10.1201/9781003078593-191","title":"Engineered and subsequent intrinsic in situ bioremediation of a diesel fuel-contaminated aquifer","year":2020,"lang":"en","type":"book-chapter","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Bioremediation; Environmental science; Contamination; Diesel fuel; In situ; Aquifer; Environmental chemistry; Waste management; Geology; Engineering; Chemistry; Groundwater; Geotechnical engineering; Biology; Ecology","score_opus":0.011268709388722514,"score_gpt":0.18812288143332917,"score_spread":0.17685417204460666,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236653713","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39331096,0.00048130244,0.000048198166,0.0013992537,0.00043995288,0.0015571215,0.00017573759,0.00013223464,0.6024552],"genre_scores_gemma":[0.981273,0.00054767635,0.00014292853,0.00021861319,0.000029480427,0.0000019774068,0.00010233499,0.000020512172,0.017663455],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99884564,0.000013256844,0.0004053259,0.0003381288,0.00025029006,0.00014736225],"domain_scores_gemma":[0.9995595,0.000028556315,0.00015915945,0.00013633174,0.000012855981,0.000103586404],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00011568594,0.0002313813,0.00031468045,0.00009237651,0.000011324845,0.000011022663,0.00011721449,0.00024419278,0.0023736572],"category_scores_gemma":[0.000033027907,0.00020151107,0.000049514558,0.000077657394,0.00013573836,0.00007511433,0.00014624355,0.00017563712,0.00027088347],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014695677,0.00008606519,0.007065247,0.00021759389,0.00007475341,0.000056244928,0.0013087019,0.000008506897,0.95789725,0.005881829,0.00403496,0.023221903],"study_design_scores_gemma":[0.009953967,0.001467997,0.46578577,0.00075421593,0.00037109744,0.00003319721,0.0003186461,0.001146952,0.29861048,0.0059601995,0.21049498,0.0051024742],"about_ca_topic_score_codex":0.0000834553,"about_ca_topic_score_gemma":0.0011164872,"teacher_disagreement_score":0.65928674,"about_ca_system_score_codex":0.00014918711,"about_ca_system_score_gemma":0.000015691558,"threshold_uncertainty_score":0.9985383},"labels":[],"label_agreement":null},{"id":"W4237785732","doi":"10.7287/peerj.preprints.27696","title":"Bioremediation of engine-oil contaminated soil using local residual organic matter","year":2019,"lang":"en","type":"preprint","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Bioremediation; Environmental remediation; Organic matter; Environmental science; Manure; Environmental engineering; Contamination; Waste management; Environmental chemistry; Pulp and paper industry; Agronomy; Chemistry; Biology; Ecology","score_opus":0.010888090584295533,"score_gpt":0.21440767564778382,"score_spread":0.20351958506348827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237785732","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99235594,0.00001716638,0.0022919383,0.00020667844,0.0006715303,0.00018668004,0.000076891694,0.000042364376,0.004150827],"genre_scores_gemma":[0.9965246,0.000047752364,0.00079511345,0.0003244786,0.000059494192,0.0000012566409,0.00016641825,0.000026630018,0.0020542594],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983033,0.000074492134,0.0004928842,0.0004613442,0.00040668962,0.00026131215],"domain_scores_gemma":[0.99912935,0.000030422647,0.00033625963,0.0003898401,0.000033363853,0.00008077908],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000262033,0.00026165557,0.0003262138,0.000076287615,0.000028950124,0.00002619701,0.00031055446,0.00041680387,0.023981735],"category_scores_gemma":[0.00002456424,0.00022686791,0.00008096554,0.00017239904,0.00016817737,0.0000829067,0.00069117476,0.00027957401,0.0025042149],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027416849,0.0000840908,0.049358808,0.00011893747,0.000031672404,0.000002368886,0.00027665577,0.0046252785,0.9382116,0.0000017633536,0.004249374,0.003012031],"study_design_scores_gemma":[0.00084848556,0.00004971367,0.06418373,0.00012035047,0.000087940134,0.0000058232,0.000185147,0.016991138,0.91600347,0.000027576618,0.0007764564,0.0007201904],"about_ca_topic_score_codex":0.0009252712,"about_ca_topic_score_gemma":0.00035472593,"teacher_disagreement_score":0.022208152,"about_ca_system_score_codex":0.00030764425,"about_ca_system_score_gemma":0.00007151541,"threshold_uncertainty_score":0.9982725},"labels":[],"label_agreement":null},{"id":"W4237990559","doi":"10.1002/9781118960608.gbm00513","title":"<i>Methanosaeta</i>","year":2015,"lang":"en","type":"other","venue":"Bergey's Manual of Systematics of Archaea and Bacteria","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Methanosaeta; Mesophile; Thermophile; Biology; Methane; Methanogenesis; Bacteria; Ecology; Genetics","score_opus":0.010981797163637144,"score_gpt":0.23025163891633688,"score_spread":0.21926984175269973,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237990559","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2503668,0.0008864637,0.00006222683,0.00016909881,0.0016574161,0.001963304,0.0022219513,0.000113208844,0.74255955],"genre_scores_gemma":[0.28870806,0.0006765752,0.012515454,0.00011192305,0.00035867596,0.000011594439,0.00035924208,0.00040656177,0.6968519],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99856216,0.00009021371,0.00057476223,0.00022133882,0.00038358683,0.0001679705],"domain_scores_gemma":[0.998769,0.000029681443,0.00076139753,0.0002978979,0.00002033904,0.000121685356],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00040088338,0.00022776122,0.0006662221,0.00008683095,0.000011687222,0.000007277768,0.00023856627,0.00020882652,0.0036800953],"category_scores_gemma":[0.000039394436,0.00017576167,0.000065046304,0.00010656712,0.00028336025,0.000041755353,0.00026906433,0.00006367319,0.00019103034],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027913979,0.00013209521,0.0018738341,0.004485588,0.00012270237,0.0000044129597,0.0007795598,4.1392067e-7,0.14600596,0.00007981908,0.8461719,0.00031582048],"study_design_scores_gemma":[0.001521311,0.00053229573,0.0036366105,0.004264161,0.00034001927,0.000030525436,0.00040155734,0.000026021618,0.023539253,0.00027571223,0.96430176,0.0011307384],"about_ca_topic_score_codex":0.00029398545,"about_ca_topic_score_gemma":0.0002724927,"teacher_disagreement_score":0.1224667,"about_ca_system_score_codex":0.000021827245,"about_ca_system_score_gemma":0.000019427784,"threshold_uncertainty_score":0.99723065},"labels":[],"label_agreement":null},{"id":"W4238986745","doi":"10.1002/9781119951438.eibc0573","title":"2,3‐Dihydroxybiphenyl 1,2‐Dioxygenase","year":2004,"lang":"en","type":"other","venue":"Encyclopedia of Inorganic and Bioinorganic Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Dioxygenase; Pseudomonas putida; Chemistry; Stereochemistry; Active site; Biphenyl; Enzyme; Pseudomonas; Bacteria; Biochemistry; Biology; Organic chemistry","score_opus":0.0027619281359666232,"score_gpt":0.17769264061899237,"score_spread":0.17493071248302575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4238986745","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.044309333,0.001241025,0.000014919956,0.00016006765,0.00027990612,0.00033199775,0.0002531993,0.00021158617,0.95319796],"genre_scores_gemma":[0.11032571,0.009263451,0.0011646686,0.00023926773,0.0006263228,0.0000047719777,0.00020639559,0.0005350425,0.87763435],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99823624,0.000017070377,0.00042714682,0.000619675,0.00034563016,0.00035426443],"domain_scores_gemma":[0.99886847,0.00001667819,0.00040473815,0.00046610087,0.00000875311,0.00023527918],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000093517454,0.00045191307,0.00046115575,0.0000376018,0.000043659405,0.0000152345765,0.0003923417,0.0006033917,0.09322179],"category_scores_gemma":[0.000057442623,0.00040525413,0.00009246517,0.00030656188,0.00037144468,0.00004291134,0.0003646605,0.0002761683,0.0009473546],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009668961,0.0001576929,0.0031268843,0.0003101107,0.00006105844,0.000017329428,0.00015428563,2.2535825e-7,0.5209142,0.0000052631167,0.47382936,0.0014139505],"study_design_scores_gemma":[0.0010445545,0.000046409907,0.00123389,0.00021124115,0.00009356845,0.000056456112,0.00008834266,0.0000016367921,0.24072832,0.000089696456,0.7554366,0.000969313],"about_ca_topic_score_codex":0.0003945651,"about_ca_topic_score_gemma":0.00016030046,"teacher_disagreement_score":0.2816072,"about_ca_system_score_codex":0.00013934415,"about_ca_system_score_gemma":0.00013601236,"threshold_uncertainty_score":0.99983996},"labels":[],"label_agreement":null},{"id":"W4241170536","doi":"10.24124/2018/58871","title":"Bioremediation of drill cuttings and petroleum-contaminated soil using biosurfactant-enhanced soil washing, biostimulation, and bioaugmentation","year":2018,"lang":"en","type":"dissertation","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Northern British Columbia","funders":"","keywords":"Biodegradation; Bioremediation; Biostimulation; Drill cuttings; Petroleum; Bioaugmentation; Environmental chemistry; Hydrocarbon; Total petroleum hydrocarbon; Soil contamination; Environmental science; Waste management; Environmental engineering; Environmental pollution; Contamination; Chemistry; Pulp and paper industry; Soil water; Ecology; Drilling fluid; Biology; Soil science; Materials science; Engineering; Organic chemistry; Drilling; Environmental protection","score_opus":0.007556676410099005,"score_gpt":0.23591777383584817,"score_spread":0.22836109742574917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4241170536","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965864,0.00007048912,0.00020557083,0.000055245968,0.00043088148,0.00044210278,0.00005711935,0.000066046385,0.0020861817],"genre_scores_gemma":[0.9950057,0.0004053686,0.0020709601,0.0001002187,0.00006602428,0.0000034653501,0.0010002317,0.000044190303,0.0013037983],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975996,0.000077060016,0.00079041754,0.00070489745,0.00049612933,0.00033186574],"domain_scores_gemma":[0.9985213,0.000058670103,0.00094212184,0.00021157094,0.000114350856,0.0001519874],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00037188004,0.00043016835,0.0004322231,0.00022630552,0.00021285305,0.00009124597,0.0001488151,0.00044605925,0.0009567399],"category_scores_gemma":[0.000116404255,0.00039775064,0.000067135916,0.00038188676,0.00027298785,0.00045698462,0.00007516949,0.0001540515,0.000056365774],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010572007,0.00004967101,0.01224892,0.000102261016,0.00003356816,4.8433935e-7,0.0015996723,0.000056891888,0.9802994,0.0000049279365,0.00043294227,0.005065526],"study_design_scores_gemma":[0.0012381022,0.00019316244,0.07462544,0.00018847198,0.00015984739,0.0000036453453,0.0013163368,0.012616612,0.908646,0.0000695095,0.00029719216,0.00064571644],"about_ca_topic_score_codex":0.0011667794,"about_ca_topic_score_gemma":0.0028524303,"teacher_disagreement_score":0.07165345,"about_ca_system_score_codex":0.00017087672,"about_ca_system_score_gemma":0.0000466513,"threshold_uncertainty_score":0.99995655},"labels":[],"label_agreement":null},{"id":"W4241443393","doi":"10.7287/peerj.7389v0.1/reviews/2","title":"Peer Review #2 of \"Bioremediation of engine-oil contaminated soil using local residual organic matter (v0.1)\"","year":2019,"lang":"en","type":"peer-review","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Center for Northern Studies; Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Strong","keywords":"Bioremediation; Environmental science; Residual; Contamination; Environmental chemistry; Organic matter; Residual oil; Petroleum engineering; Chemistry; Biology; Computer science; Geology; Ecology","score_opus":0.01963197143066845,"score_gpt":0.26363753035979776,"score_spread":0.2440055589291293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4241443393","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0654148,0.23451412,0.0017854177,0.39433864,0.019238498,0.010435461,0.010117142,0.00044174984,0.26371416],"genre_scores_gemma":[0.012591194,0.11836334,0.000865832,0.019145407,0.0002524707,0.000008915966,0.0053184396,0.00013011412,0.8433243],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9959714,0.00017757884,0.0012807804,0.0005185707,0.0017198412,0.00033185515],"domain_scores_gemma":[0.9976942,0.000069507005,0.0010507684,0.0005922361,0.0004871096,0.000106168416],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0014557155,0.00041473092,0.001110265,0.00008062763,0.000026683845,0.0000095828045,0.00048332234,0.00038646566,0.0930386],"category_scores_gemma":[0.00045817372,0.00032973412,0.00021907753,0.00050284935,0.00022057089,0.00011932351,0.00027542602,0.00031595494,0.002277146],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006107046,0.000060128863,0.00038338237,0.01701313,0.00003364941,0.0000013868471,0.000026129559,0.0000050527533,0.04578078,5.298415e-7,0.9322203,0.004469433],"study_design_scores_gemma":[0.00059591216,0.00008482909,0.0013797577,0.026822848,0.00052288227,0.000014180934,0.000024628478,0.00010040223,0.047984287,0.0000017748636,0.92171955,0.0007489287],"about_ca_topic_score_codex":0.0006041896,"about_ca_topic_score_gemma":0.00031648623,"teacher_disagreement_score":0.5796101,"about_ca_system_score_codex":0.00029063725,"about_ca_system_score_gemma":0.00015297912,"threshold_uncertainty_score":0.9999155},"labels":[],"label_agreement":null},{"id":"W4244260726","doi":"10.1680/geimogacl.32774.0065","title":"Remediation of a Heavy Metal Contaminated Soil by a Rhamnolipid Foam","year":2004,"lang":"en","type":"book-chapter","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Concordia University","keywords":"Rhamnolipid; Distilled water; Environmental remediation; Foam fractionation; Contamination; Metal; Human decontamination; Chemistry; Waste management; Environmental chemistry; Materials science; Chromatography; Metallurgy; Pulmonary surfactant; Bacteria; Engineering","score_opus":0.00808222669112099,"score_gpt":0.19133220578257112,"score_spread":0.18324997909145013,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4244260726","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.013463687,0.00011803064,0.00008382219,0.0003778033,0.0003990688,0.0005920879,0.0003427403,0.0000951857,0.9845276],"genre_scores_gemma":[0.45402762,0.0003117344,0.00024906322,0.000555456,0.00006510031,0.0000029607065,0.000461322,0.00004432078,0.54428244],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99845284,0.000014381672,0.00047991564,0.00037862358,0.0004651864,0.0002090689],"domain_scores_gemma":[0.9992386,0.000021294529,0.0003607987,0.00024088383,0.00002345548,0.00011498631],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00016806934,0.00028318694,0.00035972762,0.00005306004,0.000037898466,0.000012074532,0.00020509044,0.00037187815,0.032636445],"category_scores_gemma":[0.00002263313,0.00024203832,0.00014364008,0.000050846906,0.00021596422,0.00009848281,0.0001083404,0.00017718713,0.0016171931],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012965145,0.00021822673,0.00037847873,0.000067563305,0.00015242449,0.000010662114,0.0003078726,0.0000176171,0.86695975,0.006687144,0.11286391,0.012206685],"study_design_scores_gemma":[0.0026458479,0.000569018,0.0009707414,0.00016687432,0.0002202315,0.000013193498,0.00003316068,0.000072099865,0.5851964,0.0037403428,0.40491825,0.0014538665],"about_ca_topic_score_codex":0.0003601516,"about_ca_topic_score_gemma":0.0005055243,"teacher_disagreement_score":0.44056392,"about_ca_system_score_codex":0.00028923145,"about_ca_system_score_gemma":0.00004169354,"threshold_uncertainty_score":0.9991602},"labels":[],"label_agreement":null},{"id":"W4245385687","doi":"10.26434/chemrxiv.14058269","title":"Total Synthesis, Isolation, Surfactant Properties, and Biological Evaluation of Ananatosides and Related Macrodilactone-Containing Rhamnolipids","year":2021,"lang":"en","type":"preprint","venue":"ChemRxiv","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Chicoutimi; Institut National de la Recherche Scientifique","funders":"Fonds de recherche du Québec – Nature et technologies; Fonds de Recherche du Québec - Santé; Université de Sherbrooke; Natural Sciences and Engineering Research Council of Canada; Liverpool John Moores University; Centre National de la Recherche Scientifique; Ministère de l'Enseignement supérieur, de la Recherche et de l'Innovation","keywords":"Stereochemistry; Glycosylation; Anomer; Chemistry; Rhamnose; Moiety; Chemical structure; Total synthesis; Biochemistry; Polysaccharide; Organic chemistry","score_opus":0.04789418311537623,"score_gpt":0.24161296534478055,"score_spread":0.1937187822294043,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245385687","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974567,0.0011403566,0.000007848022,0.0001780763,0.00015663763,0.00038480575,0.00000964662,0.000029379675,0.00063650566],"genre_scores_gemma":[0.99894553,0.0005909434,0.00031439352,0.000028181985,0.000017192482,0.0000128172,0.000047763937,0.000012694542,0.000030501036],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99821085,0.00020748396,0.00045958016,0.0005787109,0.00034626783,0.0001971186],"domain_scores_gemma":[0.99923694,0.00006279853,0.00029390815,0.00024090598,0.00006961647,0.00009582458],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010637989,0.00024037431,0.00036077612,0.00003874135,0.00007837618,0.00006503375,0.00011098065,0.00038028625,0.0014568387],"category_scores_gemma":[0.0005323796,0.00019121723,0.00005968843,0.00012906882,0.00032494264,0.0001356103,0.00053958985,0.00024363273,0.000007888566],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036261397,0.000053822452,0.1473369,0.000058839487,0.000052085095,0.0000020068512,0.00081955973,0.00012580861,0.8473243,0.0000050126187,0.000043534328,0.0041418723],"study_design_scores_gemma":[0.000516334,0.000054122254,0.5836295,0.0002721607,0.00015595503,0.000026475465,0.00048338316,0.009185505,0.40497938,0.00016588494,0.00003897432,0.000492335],"about_ca_topic_score_codex":0.00018661254,"about_ca_topic_score_gemma":0.000043168588,"teacher_disagreement_score":0.44234493,"about_ca_system_score_codex":0.00013858044,"about_ca_system_score_gemma":0.00007373405,"threshold_uncertainty_score":0.999456},"labels":[],"label_agreement":null},{"id":"W4246181720","doi":"10.1016/s0168-6496(02)00282-9","title":"Prevalence of alkane monooxygenase genes in Arctic and Antarctic hydrocarbon-contaminated and pristine soils","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Ministère de la Défense Nationale; Public Works and Government Services Canada","keywords":"Biology; Alkane; Hydrocarbon; Arctic; Gene; Ecology; Soil water; Monooxygenase; Genetics; Biochemistry; Cytochrome P450; Enzyme","score_opus":0.007728244564760832,"score_gpt":0.18814517891993032,"score_spread":0.18041693435516948,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4246181720","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984529,0.00067905296,0.0000015030881,0.0003423017,0.00010729031,0.00025620387,0.000030062807,0.000013006644,0.000117659234],"genre_scores_gemma":[0.9978193,0.0013053529,0.00020249089,0.00028079844,0.000009806284,0.0000055942687,0.000010807842,0.000007453744,0.0003583717],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99880916,0.00013230232,0.00032758826,0.00039244056,0.000026357377,0.00031213707],"domain_scores_gemma":[0.9995374,0.00010532327,0.00014429983,0.00013768574,0.000008962957,0.00006629573],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00020471303,0.00015352969,0.0002658809,0.00007155316,0.000041100753,0.0000042224874,0.0001226131,0.0001986692,0.001698275],"category_scores_gemma":[0.00007002582,0.00013911398,0.000019883686,0.00012915354,0.0006337652,0.000055727716,0.00016559297,0.00012402933,0.00007870773],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015456817,0.000065275664,0.4472903,0.000030368637,0.000006477503,0.0000094149755,0.00020001517,0.0000028848337,0.5514272,0.0000017682252,0.00011079346,0.00084008364],"study_design_scores_gemma":[0.0010813557,0.0003269655,0.9531541,0.000018719387,0.000022239383,0.00022470906,0.000027098966,0.00047406214,0.043788847,0.000036797785,0.000631067,0.00021406802],"about_ca_topic_score_codex":0.00024402856,"about_ca_topic_score_gemma":0.00092125894,"teacher_disagreement_score":0.50763834,"about_ca_system_score_codex":0.000064858745,"about_ca_system_score_gemma":0.0000054694538,"threshold_uncertainty_score":0.9992143},"labels":[],"label_agreement":null},{"id":"W4247277890","doi":"10.1111/gwmr.12180","title":"Table of Contents","year":2017,"lang":"en","type":"article","venue":"Groundwater Monitoring & Remediation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Waterloo","funders":"","keywords":"Table (database); Citation; Computer science; Information retrieval; Table of contents; World Wide Web; Database","score_opus":0.02673332612031639,"score_gpt":0.251315756966424,"score_spread":0.2245824308461076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4247277890","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99596596,0.0000072447674,0.00013489265,0.00015736064,0.0013665954,0.00011567895,0.0000036619192,0.000022295184,0.0022263292],"genre_scores_gemma":[0.9981209,0.000029363064,0.00047518266,0.000014013105,0.00020940097,0.0000030684007,0.000007726892,0.000007849176,0.0011325013],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99915034,0.000018248285,0.00020254275,0.00017283618,0.00028030138,0.00017573376],"domain_scores_gemma":[0.9993327,0.000010386883,0.00024803868,0.00032899197,0.000021587655,0.000058277983],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019161536,0.00008642871,0.00010544132,0.000019132496,0.00020444133,0.000075374,0.00027750828,0.00006190946,0.00034753443],"category_scores_gemma":[0.00008242032,0.00007451107,0.00003131563,0.00003892799,0.00009492879,0.0004613197,0.00012747916,0.00005586224,0.0003254333],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007672016,0.000023277364,0.5423395,0.0000033412318,0.00000342161,6.063802e-7,0.00011517629,0.0000041566764,0.45385197,0.0000031732088,0.00027835308,0.0033693654],"study_design_scores_gemma":[0.00022869863,0.000022331047,0.5879294,0.000009609655,0.0000049395358,4.1719807e-7,0.000016738506,0.000017884007,0.40846884,0.0000315232,0.0032030246,0.000066590146],"about_ca_topic_score_codex":0.0007849199,"about_ca_topic_score_gemma":0.000043996075,"teacher_disagreement_score":0.045589916,"about_ca_system_score_codex":0.00006863256,"about_ca_system_score_gemma":0.000004277722,"threshold_uncertainty_score":0.41828954},"labels":[],"label_agreement":null},{"id":"W4247557640","doi":"10.1515/iupac.76.0135","title":"Bioaccumulation","year":2016,"lang":"en","type":"dataset","venue":"IUPAC Standards Online","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Glossary; Toxicokinetics; Bioaccumulation; Toxicology; Environmental chemistry; Medicine; Chemistry; Pharmacology; Biology; Philosophy","score_opus":0.013856406383331273,"score_gpt":0.3687976697027819,"score_spread":0.3549412633194506,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4247557640","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0007079999,0.000028491148,0.000036941867,0.00051546184,0.0005665545,0.00020830547,0.99774367,0.00004217651,0.00015040612],"genre_scores_gemma":[0.00017055131,0.00028759218,0.00004269825,0.0004885116,0.0003053518,0.0000016020173,0.99807626,0.000014885362,0.000612557],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99812967,0.000052255662,0.000319795,0.00040602227,0.00080779864,0.00028448572],"domain_scores_gemma":[0.99915135,0.00002823062,0.00021221947,0.00044021933,0.000035214965,0.00013277442],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00031665276,0.0002624938,0.00024601922,0.000058284753,0.00007624108,0.000036047837,0.00031726676,0.00029763178,0.07705082],"category_scores_gemma":[0.00017114508,0.00018305444,0.00008910619,0.00016618358,0.0001560249,0.000103600745,0.00020461601,0.00017230005,0.00016445399],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000314736,0.00007021149,0.00013096,0.00000933347,0.0000101376045,0.000006373924,0.0000036396498,0.0000014872918,0.0010781601,3.7991944e-7,0.9945934,0.004064476],"study_design_scores_gemma":[0.0003738892,0.00005154706,0.00054837443,0.000044975826,0.000022905067,0.000002666392,0.0000022478107,0.0000042273623,0.00023060541,0.00002739145,0.99841344,0.00027771323],"about_ca_topic_score_codex":0.00018438378,"about_ca_topic_score_gemma":0.0014779256,"teacher_disagreement_score":0.07688637,"about_ca_system_score_codex":0.0005277092,"about_ca_system_score_gemma":0.00007403647,"threshold_uncertainty_score":0.9237929},"labels":[],"label_agreement":null},{"id":"W4247751176","doi":"10.1139/cjm-46-2-119","title":"Origin of &lt;i&gt;p&lt;/i&gt;-cresol in the anaerobic degradation of trinitrotoluene","year":2000,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Trinitrotoluene; Anaerobic exercise; p-Cresol; Chemistry; Degradation (telecommunications); Biodegradation; Microbiology; Environmental chemistry; Biology; Physiology; Explosive material; Organic chemistry","score_opus":0.011475384051294904,"score_gpt":0.20818567472865393,"score_spread":0.196710290677359,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4247751176","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99768627,0.0002495044,0.000005587895,0.000449505,0.00012003961,0.00016247867,0.000073994095,0.0000011932445,0.0012514243],"genre_scores_gemma":[0.9989079,0.00010706259,0.0003434858,0.00031458205,0.000026748829,6.561849e-7,0.000016186945,0.000005730451,0.00027763576],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987483,0.00021303266,0.0005851493,0.0001189536,0.000070672635,0.00026391298],"domain_scores_gemma":[0.999306,0.000056747267,0.0003202503,0.00015387601,0.000029779449,0.00013334665],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005975241,0.00010826802,0.0002535632,0.00015603642,0.000042127704,0.0000071479953,0.00044110455,0.00011916259,0.005487498],"category_scores_gemma":[0.00004909207,0.000078435776,0.00008659671,0.00033879315,0.00033763345,0.00007796002,0.000009426416,0.00014334083,0.000070762384],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003981675,0.000030599993,0.010411472,0.0000038892695,0.000010970975,0.00001784203,0.0003145144,0.00008834376,0.9792982,0.000057733578,0.0064980253,0.003228629],"study_design_scores_gemma":[0.002918553,0.0008603305,0.18573123,0.00010371745,0.0000624563,0.000733066,0.00017022179,0.000024393004,0.20206968,0.00015793074,0.6067545,0.00041390423],"about_ca_topic_score_codex":0.0016085868,"about_ca_topic_score_gemma":0.07399432,"teacher_disagreement_score":0.7772285,"about_ca_system_score_codex":0.0001503328,"about_ca_system_score_gemma":0.00022605617,"threshold_uncertainty_score":0.99542165},"labels":[],"label_agreement":null},{"id":"W4249132291","doi":"10.1897/1551-5028(2001)020<0947:eeohtt>2.0.co;2","title":"ECOTOXICOLOGICAL EFFECTS OF HEXAHYDRO-1,3,5-TRINITRO-1,3,5-TRIAZINE ON SOIL MICROBIAL ACTIVITIES","year":2001,"lang":"en","type":"article","venue":"Environmental Toxicology and Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Environmental chemistry; Chemistry; Bioindicator; Urease; Biodegradation; Ecotoxicology; Nitrification; Soil water; Ecotoxicity; Acute toxicity; Toxicology; Toxicity; Nitrogen; Biology; Ecology; Organic chemistry","score_opus":0.003730197032132732,"score_gpt":0.18445524971415014,"score_spread":0.1807250526820174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4249132291","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946616,0.000058182242,0.0000036327024,0.00022012295,0.00010258482,0.00017516843,0.000026914813,0.000026488291,0.004725286],"genre_scores_gemma":[0.99682915,0.00033008013,0.000056540754,0.0005620691,0.00007501309,0.000010300107,0.000024744944,0.000012429685,0.002099641],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988398,0.000056203873,0.00022072256,0.00040283587,0.00016617372,0.0003142444],"domain_scores_gemma":[0.99941,0.00014077876,0.00013176099,0.00017593516,7.257833e-7,0.00014084745],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009633637,0.00023075551,0.0002639123,0.000016967862,0.000092460476,0.000008710714,0.00016488449,0.0003071795,0.0067834337],"category_scores_gemma":[0.000025173242,0.00020738869,0.00007604971,0.00006616348,0.00068959204,0.0000692636,0.00020290718,0.00022836424,0.00019146991],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017775735,0.00053530437,0.01976858,0.000019729827,0.000018813675,0.000034078115,0.000055499764,0.0000153229,0.9764236,0.0000021206233,0.0013751821,0.0015740002],"study_design_scores_gemma":[0.0010936754,0.0002559455,0.043048616,0.000008618993,0.000019281139,0.000046373385,0.000046499277,0.000012414155,0.9487305,0.000024586641,0.0064957053,0.00021773862],"about_ca_topic_score_codex":0.000003000413,"about_ca_topic_score_gemma":0.000005446441,"teacher_disagreement_score":0.027693065,"about_ca_system_score_codex":0.00013944203,"about_ca_system_score_gemma":0.0000060843136,"threshold_uncertainty_score":0.9941245},"labels":[],"label_agreement":null},{"id":"W4251621159","doi":"10.24124/2017/1349","title":"Remediation of oil-based drill cuttings using low-temperature thermal desorption","year":2017,"lang":"en","type":"dissertation","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Drill cuttings; Cutting; Environmental remediation; Waste management; Petroleum engineering; Drill; Environmental science; Extraction (chemistry); Petroleum; Drilling; Environmental engineering; Drilling fluid; Chemistry; Engineering; Contamination; Botany; Chromatography; Mechanical engineering; Ecology","score_opus":0.009566548309329752,"score_gpt":0.24253761560098766,"score_spread":0.2329710672916579,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4251621159","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9877131,0.000020693878,0.000003900508,0.000048695347,0.0005683436,0.0001468482,0.00002499923,0.000033774173,0.011439661],"genre_scores_gemma":[0.9864651,0.000039251052,0.00077916763,0.00015248408,0.00012130318,0.0000025141705,0.0012213719,0.000029704048,0.0111891255],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99854857,0.000051019248,0.0003782075,0.00035672425,0.00045411987,0.00021138928],"domain_scores_gemma":[0.99879575,0.000019129866,0.0007389156,0.00032167917,0.000051221556,0.0000733007],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00024714955,0.00024733396,0.00025018342,0.00006778284,0.00016408571,0.000058027686,0.00028146105,0.0004798105,0.0046070023],"category_scores_gemma":[0.00008370956,0.0002116153,0.00012249337,0.00010967015,0.000074309224,0.00021413738,0.000018183902,0.00019762518,0.00018347682],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060334132,0.000045056106,0.002606734,0.000073330324,0.0000069888574,9.822137e-7,0.00017785041,0.00014243851,0.99230015,0.0000018337524,0.0007785749,0.0038057237],"study_design_scores_gemma":[0.0004159119,0.00002644543,0.033449557,0.00018223598,0.00004605226,5.496064e-7,0.00007263944,0.0008105124,0.96354425,0.0000061200853,0.001112989,0.0003327293],"about_ca_topic_score_codex":0.0003654359,"about_ca_topic_score_gemma":0.00076611957,"teacher_disagreement_score":0.030842824,"about_ca_system_score_codex":0.00015648361,"about_ca_system_score_gemma":0.00007171813,"threshold_uncertainty_score":0.9963029},"labels":[],"label_agreement":null},{"id":"W4251805721","doi":"10.1007/978-3-319-50391-2_19","title":"Signature Metabolite Analysis to Determine In Situ Anaerobic Hydrocarbon Biodegradation","year":2020,"lang":"en","type":"book-chapter","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Bioremediation; Biodegradation; Hydrocarbon; Anoxic waters; Environmental chemistry; Environmental remediation; Anaerobic exercise; Environmental science; Chemistry; Contamination; Biology; Ecology; Organic chemistry; Physiology","score_opus":0.012714405663453825,"score_gpt":0.2064302164151299,"score_spread":0.19371581075167607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4251805721","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.027522407,0.00019658214,0.00032042447,0.0022295304,0.00024286222,0.0010147436,0.00019923656,0.0001510953,0.96812314],"genre_scores_gemma":[0.7814077,0.00015350334,0.0024836906,0.00426705,0.000085288026,0.0000039996785,0.0007432788,0.000041325722,0.21081418],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983466,0.000020303454,0.00040437124,0.0006505686,0.0003668144,0.00021128832],"domain_scores_gemma":[0.99933875,0.000016861344,0.00014796258,0.0002831351,0.00000803915,0.00020528326],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00012248912,0.00032506316,0.00046272008,0.00028852158,0.00002706569,0.000035712645,0.0002691699,0.00032145495,0.0069340663],"category_scores_gemma":[0.000017053875,0.0002785208,0.00019815608,0.00052702654,0.0000431197,0.00009104618,0.0001755333,0.00025275207,0.0019550498],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006937475,0.00005077385,0.0020452244,0.0000132926125,0.00037945475,0.00005878119,0.00026885862,0.00037038507,0.96929705,0.0012903762,0.0072808308,0.018875614],"study_design_scores_gemma":[0.001438819,0.00036000556,0.049337205,0.00007167451,0.0026209166,0.0000047311055,0.000033978296,0.0033254318,0.14851229,0.0015371862,0.7888513,0.003906415],"about_ca_topic_score_codex":0.00015571504,"about_ca_topic_score_gemma":0.0059459168,"teacher_disagreement_score":0.82078475,"about_ca_system_score_codex":0.00017897929,"about_ca_system_score_gemma":0.000011226767,"threshold_uncertainty_score":0.9999667},"labels":[],"label_agreement":null},{"id":"W4252194327","doi":"10.24124/2016/bpgub1119","title":"Development of novel oil recovery methods for petroleum refinery oily sludge treatment","year":2016,"lang":"en","type":"dissertation","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Northern British Columbia","funders":"","keywords":"Waste management; Oil sludge; Oil refinery; Petroleum; Environmental science; Reuse; Refinery; Hazardous waste; Petroleum industry; Sewage treatment; Resource recovery; Engineering; Wastewater; Environmental engineering; Chemistry","score_opus":0.031680323331956584,"score_gpt":0.3184681872156961,"score_spread":0.2867878638837395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4252194327","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.68952036,0.00018318224,0.016032826,0.00029124974,0.0036128068,0.0009465115,0.00062685105,0.00014519486,0.288641],"genre_scores_gemma":[0.0028755523,0.0003220581,0.624694,0.00013588274,0.00007699033,0.00012190744,0.0013527429,0.000053916847,0.37036693],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99846345,0.000029722692,0.0005899167,0.000448278,0.00019788886,0.00027071932],"domain_scores_gemma":[0.9991571,0.00010317032,0.0003929889,0.00023119706,0.00002493994,0.000090615016],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00036210546,0.00030575533,0.0003814423,0.00007180747,0.0000865892,0.000014315284,0.00019750184,0.0002668706,0.0029389102],"category_scores_gemma":[0.0000500712,0.00019926728,0.00018773662,0.000086409265,0.00003086378,0.00007937502,0.00003255003,0.000046742658,0.00019518618],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012639549,0.00014296196,0.000038722097,0.000035270186,0.00003875857,8.785734e-8,0.00016802656,8.8231786e-7,0.63436717,0.000009295198,0.0009597431,0.36411268],"study_design_scores_gemma":[0.0010474052,0.000121654644,0.0017267398,0.00006279665,0.000042859756,6.006495e-7,0.0001032617,0.000016136604,0.7185946,0.000011467778,0.2779313,0.00034117603],"about_ca_topic_score_codex":0.000070834365,"about_ca_topic_score_gemma":0.0010120323,"teacher_disagreement_score":0.68664485,"about_ca_system_score_codex":0.0004902042,"about_ca_system_score_gemma":0.00013031851,"threshold_uncertainty_score":0.99797255},"labels":[],"label_agreement":null},{"id":"W4255792266","doi":"10.32920/ryerson.14666307.v1","title":"Biodegradation of Diesel Contaminated Wastewater Using a Three-Phase Fluidized Bed Reactor","year":2021,"lang":"en","type":"preprint","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"","keywords":"Diesel fuel; Fluidized bed; Waste management; Wastewater; Effluent; Environmental science; Contamination; Environmental engineering; Engineering; Ecology","score_opus":0.035509627483972385,"score_gpt":0.27550153130605937,"score_spread":0.239991903822087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255792266","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979698,0.00003493002,0.00045963892,0.000112765396,0.0003758004,0.00045234276,0.00012976913,0.00004476409,0.0004201694],"genre_scores_gemma":[0.99422693,0.000045679662,0.0048975023,0.00006679144,0.000023495131,0.0000037021553,0.0005708181,0.000017021492,0.00014807344],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983216,0.000086743436,0.000533813,0.0004892174,0.00034169815,0.00022693344],"domain_scores_gemma":[0.99911255,0.00002483756,0.00032446382,0.00040139974,0.000044423916,0.00009233136],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002470875,0.0002566584,0.0003949799,0.00005647142,0.000039648756,0.000057635752,0.00024315823,0.00029450154,0.008417993],"category_scores_gemma":[0.00005628065,0.00020500015,0.0001389285,0.00017818852,0.00014336032,0.00012648033,0.00070249196,0.00019196805,0.00006920823],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005389013,0.00018982548,0.0030050492,0.000034713008,0.000035054563,0.0000052649857,0.00024530257,0.000006387564,0.994789,0.0000017711712,0.00033624793,0.00129751],"study_design_scores_gemma":[0.0010863466,0.000036993955,0.0012204037,0.00007324871,0.000054397027,0.0000023650316,0.00011490763,0.0030183194,0.9939149,0.000017070586,0.0001872825,0.00027373695],"about_ca_topic_score_codex":0.0022719842,"about_ca_topic_score_gemma":0.0008770104,"teacher_disagreement_score":0.008348784,"about_ca_system_score_codex":0.00020192737,"about_ca_system_score_gemma":0.00005073788,"threshold_uncertainty_score":0.99248844},"labels":[],"label_agreement":null},{"id":"W4256600551","doi":"10.1139/w00-017","title":"Bacterial metabolism of fluorene, dibenzofuran, dibenzothiophene, and carbazole","year":2000,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Dibenzofuran; Dibenzothiophene; Fluorene; Carbazole; Chemistry; Photochemistry; Biphenyl; Organic chemistry; Naphthalene; Sulfur","score_opus":0.004879301326595117,"score_gpt":0.1728479911562785,"score_spread":0.16796868982968338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4256600551","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99747527,0.00039096497,0.0000017533159,0.00025514193,0.0003904878,0.000054924785,0.00013575229,0.0000018573118,0.001293873],"genre_scores_gemma":[0.99884355,0.00012384262,0.00039509492,0.0002867913,0.00008963065,1.6502912e-7,0.000010452849,0.000007332123,0.00024313171],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99914753,0.00007368402,0.00036825915,0.00012235188,0.0000387204,0.00024942085],"domain_scores_gemma":[0.99939317,0.000019196548,0.00016489466,0.000095943404,0.000021815324,0.00030499874],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00019461908,0.00010992951,0.00025484143,0.00007084433,0.00005502342,0.000012764852,0.00020355712,0.00011880032,0.015567171],"category_scores_gemma":[0.000023229262,0.0000902321,0.00006266348,0.00010766312,0.000355774,0.0000855249,0.000014910889,0.000112833266,0.000076442084],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033786124,0.000008425072,0.0060250466,0.0000026036153,0.000017228094,0.000012718116,0.00025680586,0.000010602538,0.98065186,0.000013570052,0.004918119,0.008049234],"study_design_scores_gemma":[0.001488919,0.0001815701,0.08924188,0.000023479712,0.00005803639,0.00061974616,0.00006203188,0.0000043458326,0.26749337,0.0000930116,0.64043885,0.00029476985],"about_ca_topic_score_codex":0.0031789246,"about_ca_topic_score_gemma":0.020252297,"teacher_disagreement_score":0.7131585,"about_ca_system_score_codex":0.00005109292,"about_ca_system_score_gemma":0.00012586595,"threshold_uncertainty_score":0.9976255},"labels":[],"label_agreement":null},{"id":"W4280535414","doi":"10.1016/j.chemosphere.2022.134956","title":"Bioremediation by oil degrading marine bacteria: An overview of supplements and pathways in key processes","year":2022,"lang":"en","type":"review","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":58,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Bioremediation; Pollutant; Spillage; Environmental remediation; Environmental science; Petroleum; Pollution; Oil pollution; Waste management; Environmentally friendly; Oil spill; Biochemical engineering; Environmental chemistry; Environmental engineering; Contamination; Chemistry; Biology; Ecology; Engineering","score_opus":0.07015445950422336,"score_gpt":0.29287218063420345,"score_spread":0.2227177211299801,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280535414","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02381168,0.97398686,3.2576375e-7,0.000015121314,0.00013692457,0.00038378462,0.0005529399,0.000025979334,0.0010863922],"genre_scores_gemma":[0.00037997696,0.9972709,0.00033901003,0.000036338555,0.000019920712,0.000031519914,0.0017144647,0.000027739385,0.00018016332],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99841815,0.000085603315,0.0005496271,0.0004498639,0.0002674489,0.00022931113],"domain_scores_gemma":[0.9992406,0.00004421721,0.00039918642,0.00021499179,0.000006769663,0.000094232455],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00026666952,0.00028466491,0.00066487386,0.00001826386,0.000048822305,0.000027202082,0.00028566478,0.0001523312,0.019600395],"category_scores_gemma":[0.000063942745,0.00024613496,0.000060793474,0.0005226655,0.00006787181,0.00018121714,0.00036061788,0.00016994103,0.000028284323],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000042597617,0.00012956018,0.002322417,0.007585948,0.000011561423,0.0000024696908,0.00013099141,1.2201106e-7,0.0013905689,0.000001384902,0.0015165061,0.9869042],"study_design_scores_gemma":[0.00024107918,0.00004201834,0.00020010045,0.00057759415,0.000054395012,0.0000039755905,0.0000428115,0.0000029441355,0.0006431182,0.000007707764,0.9979106,0.00027361664],"about_ca_topic_score_codex":0.00018220433,"about_ca_topic_score_gemma":0.0005372076,"teacher_disagreement_score":0.99639416,"about_ca_system_score_codex":0.00024209992,"about_ca_system_score_gemma":0.00006932905,"threshold_uncertainty_score":0.9999991},"labels":[],"label_agreement":null},{"id":"W4280567420","doi":"10.1017/9781108819732.012","title":"Natural Toxins","year":2022,"lang":"en","type":"book-chapter","venue":"Ecotoxicology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Underpinning; Natural (archaeology); Environmental planning; Engineering ethics; Environmental science; Engineering; Geography","score_opus":0.009946281005417567,"score_gpt":0.20658857014874377,"score_spread":0.1966422891433262,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280567420","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0046966686,0.000069753034,4.988376e-7,0.00064049684,0.0016357716,0.000283187,0.00008221529,0.00006078405,0.99253064],"genre_scores_gemma":[0.042386983,0.00012441263,0.00010744501,0.0029393972,0.00013347523,0.0000069742878,0.00012966296,0.000034883433,0.9541368],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989177,0.000023225744,0.00022225936,0.00039282814,0.00020063619,0.00024333481],"domain_scores_gemma":[0.99949545,0.00003339353,0.00015346834,0.00023499888,0.000003407031,0.00007925624],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00010877066,0.0002099986,0.00022665288,0.00004502031,0.0001126373,0.000009941231,0.00031245287,0.00025230655,0.4849683],"category_scores_gemma":[0.000014358776,0.00020348588,0.00010759644,0.0000264243,0.00016902006,0.00004858948,0.00045329085,0.00046499693,0.01145177],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000067936984,0.000104727646,0.0007587403,0.000013152797,0.00008286995,0.00019727787,0.00019840397,0.000019826943,0.14787026,0.0247587,0.81375194,0.01217618],"study_design_scores_gemma":[0.00014465197,0.00009117087,0.0006319321,0.0000016623032,0.000011338582,0.000021106973,0.0000018773924,0.000006212282,0.0007463584,0.00078347145,0.99731565,0.00024457357],"about_ca_topic_score_codex":0.00001123506,"about_ca_topic_score_gemma":0.0004585764,"teacher_disagreement_score":0.47351655,"about_ca_system_score_codex":0.00039129346,"about_ca_system_score_gemma":0.000021539656,"threshold_uncertainty_score":0.98931795},"labels":[],"label_agreement":null},{"id":"W4281630687","doi":"10.1016/j.phytochem.2022.113266","title":"Molecular and biochemical characterization of Catharanthus roseus perivine-N-methyltransferase","year":2022,"lang":"en","type":"article","venue":"Phytochemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Prairie; Genome Alberta; Ontario Ministry of Research, Innovation and Science; Canada Research Chairs; Genome British Columbia; Canada Foundation for Innovation; Genome Canada","keywords":"Catharanthus roseus; O-methyltransferase; Apocynaceae; Subfamily; Biology; Methyltransferase; Biochemistry; Gene family; Cloning (programming); Phytochemical; Biosynthesis; Molecular cloning; Gene; Botany; Methylation; Gene expression","score_opus":0.0036332911515729715,"score_gpt":0.18701003300185567,"score_spread":0.18337674185028272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4281630687","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989678,0.000029292956,0.000052285537,0.00012399766,0.00003162137,0.00008539422,0.00013306686,0.000014172235,0.0005623429],"genre_scores_gemma":[0.9996028,0.000012648683,0.00006477843,0.00012920264,0.000011545814,0.000008833062,0.00010529753,0.0000067221627,0.000058158956],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99937147,0.000017289627,0.00013769743,0.00019083692,0.00017480369,0.00010793302],"domain_scores_gemma":[0.9997653,0.000006417621,0.000049066446,0.00011868216,0.000004531204,0.000056004978],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007125581,0.00007902048,0.00008862045,0.000008575467,0.000053659875,0.000005858919,0.000106153384,0.000029669685,0.002016642],"category_scores_gemma":[0.000012814794,0.00008374059,0.000029839963,0.00012058606,0.000093409246,0.000030257992,0.00011184043,0.00008406054,0.000006604006],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018501307,0.00005834919,0.004446715,0.0000144729365,0.0000033586996,0.000002989359,0.00010714497,0.0000050429103,0.994845,0.0000012975684,0.000074374766,0.0004227584],"study_design_scores_gemma":[0.0001975751,0.000017907445,0.00825425,0.0000022410652,0.0000060918487,0.000009460722,0.000020858055,0.000060392755,0.99064595,0.0000069149473,0.0006828675,0.00009552272],"about_ca_topic_score_codex":0.000012013353,"about_ca_topic_score_gemma":2.3361999e-7,"teacher_disagreement_score":0.0041990764,"about_ca_system_score_codex":0.000037118236,"about_ca_system_score_gemma":0.000008425214,"threshold_uncertainty_score":0.99889565},"labels":[],"label_agreement":null},{"id":"W4281755203","doi":"10.1016/j.jenvman.2022.115416","title":"Floating treatment wetlands for the bioremediation of oil spills: A review","year":2022,"lang":"en","type":"review","venue":"Journal of Environmental Management","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"International Institute for Sustainable Development; University of Manitoba","funders":"","keywords":"Bioremediation; Environmental remediation; Wetland; Environmental science; Biodegradation; Rhizosphere; Contamination; Residual oil; Phragmites; Environmental engineering; Waste management; Environmental chemistry; Ecology; Biology; Petroleum engineering; Bacteria; Engineering; Chemistry","score_opus":0.0380157737152593,"score_gpt":0.28392591857827404,"score_spread":0.24591014486301474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4281755203","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00003531353,0.99740726,0.000029535317,0.0001097944,0.00046283202,0.0009786608,0.00015866202,0.0000041947214,0.0008137227],"genre_scores_gemma":[0.000036849815,0.99796414,0.0006568904,0.00020891035,0.00011265084,0.0000484963,0.000063423,0.000030003432,0.00087864546],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974153,0.00014308376,0.0013124276,0.00025050703,0.0006554291,0.00022322453],"domain_scores_gemma":[0.9972293,0.00020632693,0.0021605843,0.00032417997,0.0000027682916,0.00007686233],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00095571566,0.00033253952,0.0009454496,0.000088288165,0.00013529949,0.000015270369,0.00054824364,0.000066624714,0.005764242],"category_scores_gemma":[0.000028176526,0.00019313116,0.00081695215,0.00021003772,0.00010118034,0.00008969505,0.00028263257,0.00015963441,0.000059365826],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012198351,0.00022484038,0.000030368385,0.003723625,0.00028245716,0.000006722877,0.000037946233,0.000014197044,0.000032054086,0.0000030494978,0.0032932302,0.9923393],"study_design_scores_gemma":[0.00045006326,0.0003298815,0.00006941644,0.0024613282,0.0019688292,0.000022058164,0.00007583609,0.0000062160434,0.000013967201,0.0000031776653,0.99441683,0.00018241226],"about_ca_topic_score_codex":0.0000055919722,"about_ca_topic_score_gemma":0.000003658028,"teacher_disagreement_score":0.9921569,"about_ca_system_score_codex":0.0010650682,"about_ca_system_score_gemma":0.000017993796,"threshold_uncertainty_score":0.9951446},"labels":[],"label_agreement":null},{"id":"W4282833553","doi":"10.1093/femsec/fiac072","title":"Investigation of active site amino acid influence on carbon and chlorine isotope fractionation during reductive dechlorination","year":2022,"lang":"en","type":"article","venue":"FEMS Microbiology Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Brotherhood of St Laurence","keywords":"Biology; Fractionation; Chlorine; Isotopes of carbon; Reductive dechlorination; Environmental chemistry; Carbon fibers; Isotope; Dissolved organic carbon; Amino acid; Biochemistry; Ecology; Contamination; Chromatography; Organic chemistry; Total organic carbon","score_opus":0.007775484786901428,"score_gpt":0.20032623672021097,"score_spread":0.19255075193330953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282833553","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984067,0.00000976564,0.0000011450452,0.00048603435,0.00035840366,0.00032148923,0.000076765056,0.000024320434,0.00031538613],"genre_scores_gemma":[0.99920124,0.00002392028,0.00008236992,0.00030858364,0.000026901815,0.000036081354,0.00017240242,0.000008150918,0.00014035865],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99892217,0.00017667376,0.0002581693,0.00037473175,0.000075558266,0.00019269089],"domain_scores_gemma":[0.999439,0.00006508381,0.00030236342,0.000113018454,0.000029787729,0.000050751132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021041775,0.0001290296,0.00016644552,0.00012150723,0.00020408367,0.0000040446303,0.00011081876,0.000117034026,0.0008201878],"category_scores_gemma":[0.00010789491,0.00013513777,0.000024010265,0.00024560836,0.00029338177,0.00012827592,0.00022674543,0.00022607151,0.000036638347],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015647008,0.000033939006,0.08780905,0.0000033832873,0.000012078266,0.0000016811568,0.00066308863,0.0002862852,0.9105814,0.000028454506,0.0000855702,0.0003385759],"study_design_scores_gemma":[0.0003554921,0.00024735535,0.5093886,0.0000014831845,0.0000063712096,0.000023644567,0.000101894555,0.000023515062,0.48925495,0.00007509417,0.00043223883,0.00008933924],"about_ca_topic_score_codex":0.00015726987,"about_ca_topic_score_gemma":0.00016876451,"teacher_disagreement_score":0.42157957,"about_ca_system_score_codex":0.00043974328,"about_ca_system_score_gemma":0.000025890575,"threshold_uncertainty_score":0.89804816},"labels":[],"label_agreement":null},{"id":"W4283369010","doi":"10.1016/j.coche.2022.100848","title":"Editorial overview: Hydrocarbon spills in coastal systems","year":2022,"lang":"en","type":"editorial","venue":"Current Opinion in Chemical Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Fisheries and Oceans Canada; Environment and Climate Change Canada","keywords":"Oil spill; Environmental science; Petroleum engineering; Biochemical engineering; Engineering; Environmental engineering","score_opus":0.013972755492313253,"score_gpt":0.2585151398721903,"score_spread":0.24454238437987708,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283369010","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0014908842,0.0010512583,0.0000060141283,0.000009631977,0.9967332,0.00031966664,0.00025360062,0.00005834121,0.00007739377],"genre_scores_gemma":[0.0023391927,0.0014324507,0.000019473207,0.0000016072494,0.9948331,0.00006341014,0.0012448222,0.000048350914,0.000017607033],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9970558,0.00004374642,0.0006589411,0.00061656575,0.0011514234,0.0004734736],"domain_scores_gemma":[0.9992552,0.00020308584,0.00015311089,0.00024548027,0.00000981244,0.00013333106],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00042736556,0.0003728319,0.00044863796,0.00013035054,0.000019665638,0.000046395653,0.0004733793,0.0005416651,0.00046594217],"category_scores_gemma":[0.00045393387,0.00040497942,0.00009668996,0.00047782698,0.00003596402,0.00011069517,0.0005476181,0.0016331004,0.00008270596],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018370725,0.00009241542,0.00022764473,0.0003051587,0.00000326087,8.9362186e-7,0.000043872413,0.00417439,0.009419025,0.0000026399307,0.9855188,0.00019354245],"study_design_scores_gemma":[0.0007115874,0.000017964032,0.000028331448,0.0004119224,0.0000031522252,4.7000006e-7,0.0000052446594,0.0032922288,0.00023658808,0.0000023327489,0.99485356,0.000436634],"about_ca_topic_score_codex":0.00023807649,"about_ca_topic_score_gemma":0.0000063527955,"teacher_disagreement_score":0.009334758,"about_ca_system_score_codex":0.0010672456,"about_ca_system_score_gemma":0.000057487072,"threshold_uncertainty_score":0.9998402},"labels":[],"label_agreement":null},{"id":"W4283775643","doi":"10.1016/j.chemosphere.2022.135559","title":"Response of soil microbial communities to petroleum hydrocarbons at a multi-contaminated industrial site in Lanzhou, China","year":2022,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Key Research and Development Program of China Stem Cell and Translational Research; National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Contamination; Total petroleum hydrocarbon; Environmental science; Environmental chemistry; Soil contamination; Microbial population biology; Soil water; Ecology; Biology; Chemistry; Bacteria; Soil science","score_opus":0.015327772773371905,"score_gpt":0.21078066641321755,"score_spread":0.19545289363984564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283775643","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99811697,0.0000126871,0.0000018882865,0.00074031815,0.000101115336,0.00022295468,0.00016074843,0.000027177763,0.0006161221],"genre_scores_gemma":[0.9968101,0.0000023079813,0.000094837,0.0006696725,0.000012686985,0.000010355978,0.000053714593,0.000014908647,0.002331428],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99878997,0.00026490944,0.00028159659,0.00019592524,0.00021438148,0.00025324628],"domain_scores_gemma":[0.99950445,0.00005436093,0.00010771378,0.00022993864,0.000003489084,0.00010005374],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00043149214,0.00014197225,0.0002064991,0.000019417615,0.00013282694,0.000010336682,0.00033462592,0.00008133727,0.006990061],"category_scores_gemma":[0.00006296055,0.0001481803,0.000055349905,0.00037215502,0.00010245103,0.000048180464,0.00075687567,0.00026462087,0.00015543961],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016281514,0.00019536023,0.11325068,0.000003765603,0.0000060640336,0.000009535806,0.006729087,0.0016882945,0.86731493,2.5102014e-7,0.008913501,0.00026038892],"study_design_scores_gemma":[0.010036438,0.0007310154,0.3879492,0.00004454703,0.000024364275,0.000020744905,0.005885558,0.004423934,0.5379818,0.0000027628462,0.05204042,0.0008592019],"about_ca_topic_score_codex":0.003049698,"about_ca_topic_score_gemma":0.0063341544,"teacher_disagreement_score":0.32933313,"about_ca_system_score_codex":0.00042169637,"about_ca_system_score_gemma":0.000030273672,"threshold_uncertainty_score":0.9939177},"labels":[],"label_agreement":null},{"id":"W4284991173","doi":"10.1016/j.jconhyd.2022.104051","title":"Compound-specific isotope analysis (CSIA) evaluation of degradation of chlorinated benzenes (CBs) and benzene in a contaminated aquifer","year":2022,"lang":"en","type":"article","venue":"Journal of Contaminant Hydrology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Chlorobenzene; Benzene; Environmental chemistry; Biodegradation; Chemistry; Contamination; Isotope analysis; BTEX; Degradation (telecommunications); Microbial biodegradation; Aquifer; Groundwater; Organic chemistry; Geology; Catalysis; Ecology; Microorganism; Geotechnical engineering","score_opus":0.019290621189919813,"score_gpt":0.24658533589604345,"score_spread":0.22729471470612364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4284991173","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988373,0.00033229013,0.00009594123,0.000207603,0.0001471034,0.00021671654,0.000019004683,0.0000023357848,0.00014169845],"genre_scores_gemma":[0.99963576,0.00017023849,0.00007993367,0.000042811716,0.000009067146,0.000002774939,0.000019896455,0.000005762287,0.000033744673],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99770445,0.00049324316,0.00087432715,0.00017459271,0.00059259374,0.00016079213],"domain_scores_gemma":[0.9985803,0.00008774978,0.0010296474,0.00012806604,0.00012329988,0.000050969993],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.002260942,0.0001149842,0.0005101891,0.0004191845,0.00005506471,0.000005901355,0.00019671695,0.000070681635,0.0016536138],"category_scores_gemma":[0.00005774752,0.000102489474,0.00009848618,0.0008196472,0.0001297267,0.0001459364,0.00011298076,0.0001733967,0.0000018986711],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004562805,0.00030993085,0.33353436,0.0000068055033,0.00016286652,0.000015028598,0.0006947923,0.0046906443,0.6536974,0.000053075662,0.00008230775,0.0062965294],"study_design_scores_gemma":[0.0034055351,0.0010282937,0.9318102,0.0000120962295,0.0005262517,0.00008693039,0.0004946678,0.015442809,0.045826405,0.0000849264,0.0011305525,0.00015132585],"about_ca_topic_score_codex":0.00024863976,"about_ca_topic_score_gemma":0.0007533641,"teacher_disagreement_score":0.607871,"about_ca_system_score_codex":0.00021881683,"about_ca_system_score_gemma":0.000041985117,"threshold_uncertainty_score":0.999259},"labels":[],"label_agreement":null},{"id":"W4285388038","doi":"10.1007/s11356-022-21938-9","title":"Utilization of a biosurfactant foam/nanoparticle mixture for treatment of oil pollutants in soil","year":2022,"lang":"en","type":"article","venue":"Environmental Science and Pollution Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Rhamnolipid; Environmental remediation; Pollutant; Adsorption; Contamination; Nanoparticle; Pulmonary surfactant; Biodegradation; Soil contamination; Chemistry; Environmental chemistry; Materials science; Organic chemistry; Bacteria; Nanotechnology","score_opus":0.05140333217206145,"score_gpt":0.317618942446152,"score_spread":0.2662156102740906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285388038","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984421,0.00012560541,0.0000041007597,0.00048333328,0.000049666985,0.0002651616,0.00029346047,0.0000037892514,0.00033277104],"genre_scores_gemma":[0.99929637,0.0002786762,0.00010049995,0.000036637655,0.000005863562,0.000022465976,0.0000062896243,0.0000048318952,0.00024839348],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980639,0.00011681665,0.0002542404,0.0003104279,0.00090174674,0.00035285368],"domain_scores_gemma":[0.99962956,0.000034144727,0.00008360556,0.00014885349,0.000007648912,0.00009616954],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013753951,0.00008281893,0.00013026329,0.00015509519,0.00038840267,0.00001110308,0.00019057817,0.00003020775,0.0012860928],"category_scores_gemma":[0.00004652273,0.00007140641,0.000029802068,0.000909064,0.0011069515,0.00015484377,0.0002150341,0.00004762139,0.000010043835],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009681405,0.00036748912,0.023891997,0.000004551722,0.000001717253,7.4100024e-7,0.0008645723,0.00019284686,0.93549204,0.00003871138,0.000055813558,0.038992725],"study_design_scores_gemma":[0.0010397066,0.0009235149,0.17657657,0.000005187505,0.0000037096793,0.0000038962594,0.0014062894,0.002270081,0.812875,0.00008651417,0.0047014733,0.00010810236],"about_ca_topic_score_codex":0.00031288495,"about_ca_topic_score_gemma":0.00011976669,"teacher_disagreement_score":0.15268457,"about_ca_system_score_codex":0.00066881115,"about_ca_system_score_gemma":0.00006340297,"threshold_uncertainty_score":0.9996269},"labels":[],"label_agreement":null},{"id":"W4294066976","doi":"","title":"Apport d’un soutien thermique modéré pour augmenter l’efficacité de l’oxydation chimique de sols lourdement contaminés par des HAP","year":2017,"lang":"fr","type":"preprint","venue":"HAL (Le Centre pour la Communication Scientifique Directe)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"GDG Environnement","funders":"","keywords":"Chemistry; Materials science","score_opus":0.0153882408607935,"score_gpt":0.21989723561070937,"score_spread":0.20450899474991588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4294066976","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7340406,0.00034579216,0.19821472,0.016176479,0.00042519424,0.0014582109,0.00034251407,0.00019900064,0.048797466],"genre_scores_gemma":[0.9415824,0.0018115593,0.0330984,0.0005881765,0.000091496135,0.000106776104,0.00058578904,0.00008724799,0.022048155],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.98949105,0.0062149633,0.0010834414,0.0013792007,0.0006619597,0.0011693941],"domain_scores_gemma":[0.99425316,0.00057474093,0.00145116,0.002488587,0.000560134,0.0006722056],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.010376459,0.0007802782,0.000653668,0.0001260866,0.0013440475,0.00079068984,0.0024349596,0.00078289513,0.0043974686],"category_scores_gemma":[0.0011280506,0.0008185851,0.0004288249,0.00020045182,0.0012186604,0.0003940084,0.0018809331,0.000959805,0.000926592],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017985732,0.0038495704,0.129466,0.00037073196,0.000494029,0.00006324364,0.035812464,0.0012512286,0.5926542,0.013423614,0.0068446766,0.21559033],"study_design_scores_gemma":[0.002155595,0.000004634283,0.3052127,0.0022839978,0.00021997653,0.00008693508,0.0003738178,0.030860772,0.61369944,0.007841974,0.035766814,0.0014933642],"about_ca_topic_score_codex":0.0048426036,"about_ca_topic_score_gemma":0.0054377415,"teacher_disagreement_score":0.21409696,"about_ca_system_score_codex":0.0013082834,"about_ca_system_score_gemma":0.00055270304,"threshold_uncertainty_score":0.9999561},"labels":[],"label_agreement":null},{"id":"W4295037640","doi":"10.1021/acs.est.2c02624","title":"Transient Oxygen Exposure Causes Profound and Lasting Changes to a Benzene-Degrading Methanogenic Community","year":2022,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Alberta Innovates; Genome Canada; Ontario Genomics; Mitacs; Government of Ontario; Imperial Oil Limited","keywords":"Methanogenesis; Benzene; Environmental chemistry; Anaerobic exercise; Chemistry; Oxygen; Anoxic waters; Archaea; Microbial population biology; Biodegradation; Enrichment culture; Microbiology; Food science; Biology; Bacteria; Methane; Biochemistry; Organic chemistry; Physiology","score_opus":0.014102731971507864,"score_gpt":0.22279863455643406,"score_spread":0.2086959025849262,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4295037640","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99663526,0.0000759121,0.000034480978,0.0022126695,0.00013194,0.00042783815,0.000041594587,0.00010005153,0.00034026883],"genre_scores_gemma":[0.99803746,0.000025601008,0.00090828503,0.000779028,0.000009768851,0.000054857897,0.000005252838,0.00001315429,0.00016660149],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99813277,0.000110758396,0.00019036554,0.0005065982,0.0005181594,0.00054137956],"domain_scores_gemma":[0.99936926,0.000029111347,0.000087997185,0.00033954548,0.0000018391169,0.00017227142],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009060457,0.00018200577,0.0001615793,0.00027825346,0.0017446604,0.000035011602,0.0007640487,0.00006392615,0.0015247475],"category_scores_gemma":[0.000044127726,0.00017657602,0.000026026335,0.0012364365,0.0011725808,0.0001567798,0.0018212616,0.0003962056,0.00010241791],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008421882,0.00009622763,0.034736376,0.0000017215316,0.0000035177911,0.000004438809,0.0015353428,0.00009423803,0.9545301,0.00001727381,0.000085292646,0.008887019],"study_design_scores_gemma":[0.0007332775,0.0016056676,0.23784192,0.000012436795,0.000031220632,0.00021513776,0.013353842,0.00017294029,0.6867624,0.00024955996,0.058211606,0.00080997514],"about_ca_topic_score_codex":0.00013726014,"about_ca_topic_score_gemma":0.0004406238,"teacher_disagreement_score":0.26776773,"about_ca_system_score_codex":0.0006749644,"about_ca_system_score_gemma":0.000014531309,"threshold_uncertainty_score":0.99955493},"labels":[],"label_agreement":null},{"id":"W4295828560","doi":"10.1007/978-981-19-1061-6_12","title":"A 3D Bioventing Model to Estimate Closure Time","year":2022,"lang":"en","type":"book-chapter","venue":"Lecture notes in civil engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Groundwater remediation; Closure (psychology); Multiphase flow; Process (computing); Engineering; Computer science; Mechanics; Environmental remediation","score_opus":0.007797097122791992,"score_gpt":0.20780864164593688,"score_spread":0.20001154452314487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4295828560","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.023840996,0.0012658845,0.21862733,0.0030880696,0.0030732362,0.0041946713,0.0009715536,0.0018099151,0.74312836],"genre_scores_gemma":[0.8760245,0.00009772871,0.065143995,0.0022063726,0.000508328,0.000053808697,0.00039363615,0.0006048886,0.054966748],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9985246,0.000006014853,0.00029720724,0.00047362773,0.00033847644,0.0003600862],"domain_scores_gemma":[0.9994924,0.00004958561,0.00008151953,0.0002664825,0.0000048581273,0.00010515791],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018437562,0.00035608554,0.00029634667,0.0001382878,0.00005352373,0.0000299406,0.00028400082,0.00024179125,0.011656092],"category_scores_gemma":[0.00009614645,0.0003704728,0.000099148565,0.00012790579,0.000019766012,0.00006144864,0.00036759223,0.0005454178,0.00060923735],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006153509,0.000007944226,0.00011504678,0.000024932659,0.000011045254,0.00002011568,0.000166249,0.9574976,0.039098326,0.00006469343,0.00029087008,0.0026970063],"study_design_scores_gemma":[0.00044947607,0.00008790297,0.00021575713,0.0003306071,0.000052827127,0.000025556177,4.6565788e-7,0.81971,0.0036300968,0.0010069053,0.17275994,0.0017304607],"about_ca_topic_score_codex":0.000018718307,"about_ca_topic_score_gemma":0.00038148026,"teacher_disagreement_score":0.8521835,"about_ca_system_score_codex":0.00039794337,"about_ca_system_score_gemma":0.00001528043,"threshold_uncertainty_score":0.9998747},"labels":[],"label_agreement":null},{"id":"W4297322579","doi":"10.1016/j.scitotenv.2022.159079","title":"Aerobic degradation of anionic polyacrylamide in oil sands tailings: Impact factor, degradation effect, and mechanism","year":2022,"lang":"en","type":"article","venue":"The Science of The Total Environment","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Tailings; Polyacrylamide; Chemistry; Biodegradation; Degradation (telecommunications); Chemical oxygen demand; Environmental chemistry; Gel permeation chromatography; Polymer; Waste management; Organic chemistry; Wastewater","score_opus":0.007719002538176255,"score_gpt":0.21273501375352158,"score_spread":0.20501601121534532,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4297322579","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991863,0.000033974095,0.000009188611,0.00031525255,0.00008806479,0.00020562352,0.00001703274,0.00000462517,0.00013995607],"genre_scores_gemma":[0.9994285,0.00004679265,0.00006931372,0.0000155256,0.0000036467793,0.0000066860343,0.000002624575,0.0000051300567,0.00042178144],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998465,0.00015002395,0.00024525466,0.0002419943,0.0006845956,0.00021313474],"domain_scores_gemma":[0.9993834,0.000046017707,0.00023029032,0.00029223211,0.000002192719,0.000045894223],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010816203,0.00011608824,0.00012626026,0.000050641043,0.00028283455,0.000013713734,0.00046217427,0.000022128437,0.0009083245],"category_scores_gemma":[0.00003267328,0.00006717939,0.00005790662,0.00042099867,0.0006671587,0.00017073081,0.00065874157,0.00012692183,0.000010523121],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023825183,0.000048530972,0.0018802268,0.000003127161,0.0000027725382,1.270894e-7,0.00030257064,0.008344754,0.98529464,0.0000434361,0.000008126161,0.0040478744],"study_design_scores_gemma":[0.0005702232,0.00036861756,0.24040852,0.000012677214,0.00001768803,0.00001533455,0.00024592824,0.0067547457,0.7511356,0.0002802334,0.000022660188,0.00016778488],"about_ca_topic_score_codex":0.0004538826,"about_ca_topic_score_gemma":0.000011853144,"teacher_disagreement_score":0.2385283,"about_ca_system_score_codex":0.00043278182,"about_ca_system_score_gemma":0.00002574702,"threshold_uncertainty_score":0.9945516},"labels":[],"label_agreement":null},{"id":"W4297855457","doi":"10.1007/s10646-022-02585-9","title":"Assessment of the toxicity of weathered petroleum hydrocarbon impacted soils to native plants from a site in the Canadian Subarctic","year":2022,"lang":"en","type":"article","venue":"Ecotoxicology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Royal Military College of Canada; EcoMetrix; Axdev Group (Canada); Golder Associates (Canada); Queen's University","funders":"","keywords":"Soil water; Subarctic climate; Environmental chemistry; Environmental remediation; Environmental science; Ecotoxicology; Ecology; Chemistry; Contamination; Biology; Soil science","score_opus":0.009368987914272715,"score_gpt":0.23574278663117973,"score_spread":0.22637379871690702,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4297855457","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99362606,0.000002558068,7.2561676e-7,0.0017355613,0.00014842226,0.0003785553,0.00042032386,0.000002640587,0.0036851454],"genre_scores_gemma":[0.99848473,0.0000013456597,0.000029572151,0.0014006885,0.000008457215,0.000019321787,0.000010869617,0.00000451878,0.000040506486],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987422,0.00038118594,0.00022019363,0.00017835597,0.0002540088,0.00022404866],"domain_scores_gemma":[0.99939144,0.000097702396,0.00017051632,0.00026887926,0.0000043874297,0.000067099325],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004305409,0.00008391349,0.00015589694,0.00005048688,0.00017886145,0.00000868612,0.0005332744,0.000051797168,0.0030113473],"category_scores_gemma":[0.000060397768,0.000056129,0.000043853455,0.00020941728,0.000115021525,0.00002939301,0.00024045409,0.0001986241,0.000011139869],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018709932,0.000103306964,0.4871548,9.645795e-7,0.00000896868,0.0000034539262,0.0016936039,0.00054841815,0.5100187,0.000017544799,0.0003848935,0.000046633297],"study_design_scores_gemma":[0.00030391582,0.00015799329,0.97132933,0.0000024447786,0.0000049450737,0.0000018510683,0.00033035586,0.00071790593,0.02661701,0.00007793446,0.00039360565,0.000062731226],"about_ca_topic_score_codex":0.11017607,"about_ca_topic_score_gemma":0.8060468,"teacher_disagreement_score":0.6958707,"about_ca_system_score_codex":0.0006332698,"about_ca_system_score_gemma":0.00012061378,"threshold_uncertainty_score":0.9979},"labels":[],"label_agreement":null},{"id":"W4298007944","doi":"10.1016/j.envres.2022.114456","title":"An experimental oil spill at a tidal freshwater wetland along the St. Lawrence River re-visited after 21 years","year":2022,"lang":"en","type":"article","venue":"Environmental Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Fisheries and Oceans Canada; National Research Council Canada","funders":"Fisheries and Oceans Canada; Consiglio Nazionale delle Ricerche; McGill University","keywords":"Environmental science; Wetland; Sediment; Bay; Hydrology (agriculture); Environmental chemistry; Vegetation (pathology); Petroleum seep; Nutrient; Methane; Ecology; Geology; Oceanography; Chemistry; Biology","score_opus":0.0201200531688052,"score_gpt":0.2756187016526903,"score_spread":0.2554986484838851,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4298007944","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976935,0.00011453372,5.8892465e-7,0.0003114987,0.00011446693,0.00024113424,0.00041359165,0.00002343269,0.0010872785],"genre_scores_gemma":[0.994009,0.000053533346,0.00008403066,0.0005004478,0.000062410174,0.00009217984,0.00017243414,0.00002954088,0.004996397],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9963134,0.0005539618,0.00022874416,0.0006144757,0.0016373652,0.00065208366],"domain_scores_gemma":[0.9991044,0.00006916082,0.000050153394,0.00054214743,0.0000020581738,0.0002321207],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0009093453,0.00018327657,0.00012184582,0.000057791378,0.0007717583,0.00007231758,0.00070271734,0.00006401215,0.15337926],"category_scores_gemma":[0.00001094353,0.0001437316,0.00007120395,0.00022588197,0.0009624397,0.00018929668,0.0019690765,0.000492812,0.0037004752],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003003667,0.00036992505,0.18295366,0.0000017453226,0.000009843557,0.00012406266,0.0029034107,0.000083236904,0.802937,0.0000016033642,0.007829439,0.0024857572],"study_design_scores_gemma":[0.0013214384,0.00069720665,0.57878035,0.0000069806606,0.000009243182,0.000042861495,0.0027275071,0.00050883024,0.13886687,0.000041794858,0.27643767,0.000559251],"about_ca_topic_score_codex":0.0006362347,"about_ca_topic_score_gemma":0.0012199352,"teacher_disagreement_score":0.66407007,"about_ca_system_score_codex":0.0010501386,"about_ca_system_score_gemma":0.000010521139,"threshold_uncertainty_score":0.99707526},"labels":[],"label_agreement":null},{"id":"W4298054538","doi":"","title":"Biological functioning of PAH-polluted and thermal desorption-treated soils assessed by fauna and microbial bioindicators","year":2011,"lang":"en","type":"article","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cegep de Saint Jerome","funders":"","keywords":"Bioindicator; Fauna; Environmental chemistry; Soil water; Environmental science; Soil biology; Ecology; Thermal desorption; Desorption; Chemistry; Soil science; Biology; Adsorption","score_opus":0.017839007948668693,"score_gpt":0.19192502937253073,"score_spread":0.17408602142386204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4298054538","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99788874,0.000025636937,0.000085966196,0.000036742316,0.00003563878,0.0001135824,0.00003504401,0.000034399196,0.0017442527],"genre_scores_gemma":[0.99893177,0.000038587055,0.0007078705,0.0001374702,0.000006625335,0.0000010890795,0.000021502152,0.0000048630754,0.00015025126],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99930936,0.00005062248,0.00018214191,0.00022962551,0.00007207942,0.00015618693],"domain_scores_gemma":[0.99972147,0.000020373258,0.00008977377,0.000074719785,0.0000056427953,0.00008802932],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013358012,0.00011057428,0.000121830206,0.000027615986,0.00007125655,0.000014344958,0.00006446764,0.00011379107,0.0044531873],"category_scores_gemma":[0.00001440823,0.0000771719,0.000021222295,0.00013205747,0.00032070768,0.00009637374,0.00007373613,0.00005308384,0.00005604303],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024462997,0.00004957778,0.30584255,0.0000013770793,0.000008093652,3.6735275e-7,0.000083633706,1.102865e-7,0.69227797,0.000007503763,0.00065187534,0.0010524847],"study_design_scores_gemma":[0.00041084606,0.00009631446,0.60355264,0.000003465894,0.00001076669,0.0000037283633,0.000058403944,0.000037980655,0.39538112,0.000008599474,0.0003158186,0.000120333614],"about_ca_topic_score_codex":0.0003493616,"about_ca_topic_score_gemma":0.000052315445,"teacher_disagreement_score":0.2977101,"about_ca_system_score_codex":0.00001704482,"about_ca_system_score_gemma":0.000004346094,"threshold_uncertainty_score":0.99645686},"labels":[],"label_agreement":null},{"id":"W4298274898","doi":"","title":"The influence of temperature on bacterial assemblages during bioremediation of a diesel fuel contaminated subAntarctic soil","year":2004,"lang":"en","type":"article","venue":"HAL (Le Centre pour la Communication Scientifique Directe)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Rimouski","funders":"","keywords":"Bioremediation; Diesel fuel; Environmental science; Contamination; Environmental chemistry; Soil contamination; Ecology; Environmental engineering; Chemistry; Biology; Waste management; Engineering","score_opus":0.004311985692326606,"score_gpt":0.18545148461913688,"score_spread":0.18113949892681028,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4298274898","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966189,0.000033965975,0.000029011786,0.0018567225,0.00007087654,0.00020195247,0.000022333668,0.00002961651,0.001136576],"genre_scores_gemma":[0.99888337,0.00029307936,0.00038743022,0.000033099197,0.0000068509576,0.000005145254,0.000037046237,0.000010015525,0.00034396874],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99812305,0.00073075143,0.00036386753,0.0002467816,0.00034248712,0.00019304584],"domain_scores_gemma":[0.99839234,0.00038919845,0.00035181356,0.00052074203,0.00027683616,0.00006904022],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012969925,0.00013391342,0.00015159702,0.000044789842,0.00020687137,0.000054787222,0.00044298323,0.00009388422,0.000093385126],"category_scores_gemma":[0.0009240012,0.00010276857,0.00006439204,0.0003711978,0.00035674212,0.00015082095,0.00016007692,0.00013800304,0.000031696312],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003826068,0.00016443376,0.0077460776,0.00002370696,0.000010443496,6.3715265e-7,0.0021705818,0.00020911546,0.9884221,0.0006483986,0.000028423896,0.00053780974],"study_design_scores_gemma":[0.00051698386,0.0000013559827,0.31551796,0.0001517623,0.0000066395587,0.000001358814,0.00006227178,0.000030191863,0.6833744,0.00008637531,0.00016740261,0.000083258456],"about_ca_topic_score_codex":0.00083048065,"about_ca_topic_score_gemma":0.0034337698,"teacher_disagreement_score":0.3077719,"about_ca_system_score_codex":0.00011107294,"about_ca_system_score_gemma":0.00004013027,"threshold_uncertainty_score":0.41907808},"labels":[],"label_agreement":null},{"id":"W4298328144","doi":"","title":"Biostimulation of natural microbial assemblages in oil-amended vegetated and desert Sub-Antarctic Soils","year":2004,"lang":"en","type":"article","venue":"HAL (Le Centre pour la Communication Scientifique Directe)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Rimouski","funders":"","keywords":"Biostimulation; Desert (philosophy); Soil water; Natural (archaeology); Environmental science; Geology; Soil science; Ecology; Hydrology (agriculture); Contamination; Bioremediation; Geotechnical engineering; Biology","score_opus":0.006494811572170012,"score_gpt":0.20018921454571126,"score_spread":0.19369440297354124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4298328144","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943552,0.00009551419,0.0005186206,0.0030207622,0.000060000395,0.000112375594,0.000007924728,0.000034866516,0.0017947104],"genre_scores_gemma":[0.99403507,0.00018526532,0.0053380826,0.00007783257,0.0000031243485,0.0000021523126,0.00006196947,0.000010098772,0.0002864064],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983615,0.0006277554,0.00031106683,0.00030271526,0.00019347845,0.0002034594],"domain_scores_gemma":[0.99912953,0.00020205563,0.00017239257,0.00031010987,0.00011043272,0.00007545395],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012351451,0.0001318132,0.00015596923,0.00008186452,0.000091912596,0.000051793944,0.00023386416,0.00008393089,0.00010662721],"category_scores_gemma":[0.0003517453,0.00012859612,0.00004278765,0.00040748605,0.00021825996,0.00020109693,0.00016926916,0.0001349798,0.000039427967],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014892702,0.00017756068,0.021494914,0.000017898767,0.000006263012,0.0000016534817,0.0017213459,0.000093193885,0.96665144,0.00042980255,0.000029211948,0.009361817],"study_design_scores_gemma":[0.0010819098,6.8032506e-7,0.14320871,0.00020336242,0.0000086985565,0.0000063660173,0.000042620904,0.0016725669,0.8529889,0.00047483112,0.0001404872,0.00017088038],"about_ca_topic_score_codex":0.0013198536,"about_ca_topic_score_gemma":0.006424382,"teacher_disagreement_score":0.1217138,"about_ca_system_score_codex":0.00012947568,"about_ca_system_score_gemma":0.000035601337,"threshold_uncertainty_score":0.52439976},"labels":[],"label_agreement":null},{"id":"W4299399721","doi":"","title":"Effects of nutrient and temperature on degradation of petroleum hydrocarbons in contaminated sub-Antarctic soil","year":2005,"lang":"en","type":"article","venue":"HAL (Le Centre pour la Communication Scientifique Directe)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Rimouski","funders":"","keywords":"Petroleum; Environmental science; Degradation (telecommunications); Contamination; Nutrient; Environmental chemistry; Soil contamination; Soil retrogression and degradation; Soil nutrients; Soil science; Soil water; Chemistry; Ecology; Biology; Engineering","score_opus":0.0033240840951046027,"score_gpt":0.17576613112394138,"score_spread":0.17244204702883678,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4299399721","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99591476,0.00010552212,0.00013958386,0.0014123039,0.00002481125,0.00019152668,0.000007131568,0.000016237711,0.0021881356],"genre_scores_gemma":[0.99845624,0.00022479566,0.00069941924,0.0000660521,0.0000025196139,0.0000044524986,0.0000305177,0.0000074678237,0.0005085487],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983428,0.00079511094,0.00027265443,0.00023512598,0.0002140193,0.00014027185],"domain_scores_gemma":[0.99901384,0.00041179496,0.00018644621,0.00027594465,0.00004682008,0.000065143904],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00097331003,0.000109306486,0.00015838955,0.00007842905,0.00005204932,0.00001816199,0.00018031686,0.00007956886,0.000045719793],"category_scores_gemma":[0.00032142314,0.00010192925,0.000036800593,0.0002885766,0.0001681578,0.00009708449,0.00008912504,0.00012177497,0.000013324022],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021235108,0.0004503107,0.021569295,0.000027283066,0.000006193391,7.934039e-7,0.001315286,0.000017204664,0.970317,0.0008704954,0.00009713735,0.0053077885],"study_design_scores_gemma":[0.0006974317,0.0000017053277,0.13555744,0.00021156936,0.00000816543,0.0000013963521,0.000029999403,0.0016209108,0.86141104,0.00004463043,0.00032787377,0.00008780713],"about_ca_topic_score_codex":0.00049856264,"about_ca_topic_score_gemma":0.002742264,"teacher_disagreement_score":0.11398815,"about_ca_system_score_codex":0.000083830746,"about_ca_system_score_gemma":0.000018522922,"threshold_uncertainty_score":0.4156554},"labels":[],"label_agreement":null},{"id":"W4300612709","doi":"","title":"Crude oil bioremediation in sub-Antarctic intertidal sediments: chemistry and toxicity of oiled residues","year":2004,"lang":"en","type":"article","venue":"HAL (Le Centre pour la Communication Scientifique Directe)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Rimouski","funders":"","keywords":"Bioremediation; Environmental chemistry; Intertidal zone; Environmental science; Crude oil; Chemistry; Contamination; Geology; Oceanography; Ecology; Petroleum engineering; Biology","score_opus":0.005774521969644954,"score_gpt":0.19363560539296887,"score_spread":0.18786108342332392,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4300612709","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9910691,0.00007746219,0.00045493827,0.002237642,0.00003332674,0.00007769038,0.000016795086,0.000030786592,0.0060022944],"genre_scores_gemma":[0.995875,0.0003263947,0.003190806,0.00007341252,0.0000052226455,0.0000044013595,0.000053015374,0.0000088529405,0.0004628702],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99849194,0.00043707175,0.0003353698,0.00030592334,0.00024422418,0.00018549435],"domain_scores_gemma":[0.9991155,0.00015135606,0.00019190153,0.00035349216,0.000092736875,0.00009501125],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013761997,0.00012447851,0.00014759309,0.000035756675,0.000072150535,0.000038958053,0.00026410288,0.000090868394,0.00035347385],"category_scores_gemma":[0.00050021755,0.00012356332,0.00003896375,0.00030239098,0.00025304305,0.00016732566,0.00022203142,0.00012276978,0.00003675411],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013596142,0.00024056184,0.037387144,0.0000281892,0.000005300975,0.0000011443432,0.0020688185,0.000015087684,0.95256513,0.000077894874,0.000062795734,0.007534317],"study_design_scores_gemma":[0.00070329255,5.2402794e-7,0.047413398,0.00020027018,0.000005922246,0.0000027157494,0.000059848364,0.00022409724,0.9507715,0.00014508408,0.0003501615,0.0001231922],"about_ca_topic_score_codex":0.0013221232,"about_ca_topic_score_gemma":0.0043910607,"teacher_disagreement_score":0.010026256,"about_ca_system_score_codex":0.00016576647,"about_ca_system_score_gemma":0.000034777815,"threshold_uncertainty_score":0.5038766},"labels":[],"label_agreement":null},{"id":"W4306976895","doi":"10.3389/fmars.2022.1023287","title":"Multi-method biophysical analysis in discovery, identification, and in-depth characterization of surface‐active compounds","year":2022,"lang":"en","type":"article","venue":"Frontiers in Marine Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"FP7 Research Potential of Convergence Regions; European Regional Development Fund; Horizon 2020; European Commission","keywords":"Environmentally friendly; Biochemical engineering; Bioproducts; Characterization (materials science); Nanotechnology; Biomolecule; Identification (biology); Process engineering; Environmental science; Materials science; Biofuel; Waste management; Engineering; Biology","score_opus":0.00703944607396602,"score_gpt":0.24026507705778807,"score_spread":0.23322563098382204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4306976895","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963223,9.3269813e-7,0.003121957,0.00008829171,0.00015991357,0.00016611238,0.00003182557,0.0000040683535,0.000104596635],"genre_scores_gemma":[0.9836126,0.000013083278,0.016117178,0.000032993234,0.000002288782,0.000004082453,0.000038681756,0.000002904439,0.00017621892],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99867344,0.00012117901,0.000298671,0.0003958025,0.00033287442,0.00017806336],"domain_scores_gemma":[0.9996362,0.000016707076,0.00014705963,0.0001543378,0.0000089982805,0.000036721565],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00091572735,0.000078501886,0.00018653869,0.00033798144,0.00007487904,0.00003282032,0.0002940181,0.000019194877,0.000097389064],"category_scores_gemma":[0.000043539945,0.000079778634,0.000024443112,0.003977588,0.00037215065,0.00048740802,0.0005424403,0.0001151264,0.0000017636268],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016546013,0.00008601018,0.5407743,0.0000012333414,0.0000017986215,6.3594484e-7,0.00026362864,0.0010429074,0.45676365,0.0000025952888,0.0000052474165,0.0010414403],"study_design_scores_gemma":[0.00026833903,0.000013029604,0.9417515,0.0000014329205,0.0000059816575,3.2722937e-7,0.00024290786,0.035119053,0.022450909,0.00003666915,0.000024106668,0.000085756634],"about_ca_topic_score_codex":0.00054108683,"about_ca_topic_score_gemma":0.00045125568,"teacher_disagreement_score":0.43431273,"about_ca_system_score_codex":0.00032533397,"about_ca_system_score_gemma":0.000027867787,"threshold_uncertainty_score":0.3253278},"labels":[],"label_agreement":null},{"id":"W4307492553","doi":"10.1007/978-3-662-06066-7","title":"Biodegradation and Bioremediation","year":2004,"lang":"en","type":"book","venue":"Soil biology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":89,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Bioremediation; Biodegradation; Environmental science; Biochemical engineering; Waste management; Environmental chemistry; Chemistry; Engineering; Contamination; Biology; Ecology; Organic chemistry","score_opus":0.006423444753314816,"score_gpt":0.2002188029586039,"score_spread":0.19379535820528906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307492553","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0779769,0.0007482026,0.00023224675,0.0022201617,0.0021047154,0.00095567555,0.00052650133,0.00026148313,0.9149741],"genre_scores_gemma":[0.16512634,0.0020776377,0.00096994895,0.0021525112,0.0007431662,0.000013105314,0.0050679473,0.000074928226,0.8237744],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99910337,0.000031041487,0.00021056161,0.00037611337,0.00009305576,0.00018586102],"domain_scores_gemma":[0.9995809,0.000022926659,0.00016679229,0.00014759383,0.000007896396,0.00007386847],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00013338475,0.00018874888,0.00018968426,0.000052594394,0.0000575646,0.0000139500335,0.00011433199,0.0004810642,0.0017025737],"category_scores_gemma":[0.000028061966,0.0001597375,0.00004146756,0.00005577862,0.0003407392,0.000050175808,0.00011347924,0.00014964878,0.0012976445],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000117771946,0.00021056924,0.049651586,0.00016131955,0.00016523595,0.000020078332,0.0013566968,0.000051435003,0.40756822,0.010280201,0.29261774,0.23779918],"study_design_scores_gemma":[0.0006569251,0.0001769087,0.006945574,0.000030707313,0.000042366333,0.000010337772,0.0000065181694,0.000030330184,0.0051062643,0.017676905,0.9687403,0.0005768525],"about_ca_topic_score_codex":0.000095271884,"about_ca_topic_score_gemma":0.00042156203,"teacher_disagreement_score":0.6761226,"about_ca_system_score_codex":0.00045993697,"about_ca_system_score_gemma":0.00011682396,"threshold_uncertainty_score":0.99947995},"labels":[],"label_agreement":null},{"id":"W4308591077","doi":"10.3389/fmicb.2022.958742","title":"Framework for field-scale application of molecular biological tools to support natural and enhanced bioremediation","year":2022,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Imperial Oil (Canada)","funders":"","keywords":"Bioremediation; Scale (ratio); Natural (archaeology); Biochemical engineering; Field (mathematics); Computer science; Environmental science; Computational biology; Nanotechnology; Environmental resource management; Data science; Biology; Ecology; Engineering; Contamination; Geography; Materials science; Mathematics","score_opus":0.007667216644099476,"score_gpt":0.2369461187858217,"score_spread":0.22927890214172222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308591077","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8996979,0.000038414655,0.098634645,0.00047931328,0.00045206194,0.00054963387,0.00010180186,0.0000098635055,0.000036346963],"genre_scores_gemma":[0.94400287,0.000012723921,0.054452438,0.0012660257,0.000012572329,0.00006386719,0.0001654839,0.000004567532,0.000019441162],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992137,0.0000623339,0.00021715733,0.00028436448,0.000039936072,0.00018250161],"domain_scores_gemma":[0.99970305,0.00005575405,0.0000894471,0.000110825255,0.0000072305784,0.000033673674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021670728,0.00008306427,0.00016259828,0.00005560613,0.000048424663,0.000004177801,0.00016779415,0.000101393496,0.00021044973],"category_scores_gemma":[0.00008916525,0.00007793993,0.00003356528,0.00019287445,0.000077551,0.000029316894,0.00016517511,0.000111826186,0.00000776353],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010160013,0.000032241787,0.024332125,0.0000031440632,0.0000034917418,2.5633543e-7,0.00018879645,0.000039131195,0.9555907,0.000045158133,0.0033036727,0.016359637],"study_design_scores_gemma":[0.0005324095,0.00064442196,0.012079928,0.0000028530749,0.0000063642397,0.000004422002,0.0002659221,0.00012686301,0.96716267,0.001435254,0.017520083,0.00021882348],"about_ca_topic_score_codex":0.000013742858,"about_ca_topic_score_gemma":0.000016123058,"teacher_disagreement_score":0.044304963,"about_ca_system_score_codex":0.0000856101,"about_ca_system_score_gemma":0.000007477872,"threshold_uncertainty_score":0.31782982},"labels":[],"label_agreement":null},{"id":"W4309664460","doi":"10.1016/j.scitotenv.2022.160161","title":"The effect of temperature on hydrocarbon profiles and the microbial community composition in North Saskatchewan River water during mesoscale tank tests of diluted bitumen spills","year":2022,"lang":"en","type":"article","venue":"The Science of The Total Environment","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University; National Research Council Canada; Natural Resources Canada","funders":"National Research Council Canada; Government of Canada","keywords":"BTEX; Environmental chemistry; Hydrocarbon; Sediment; Environmental science; Weathering; Ethylbenzene; Total organic carbon; Benzene; Chemistry; Geology; Geochemistry","score_opus":0.002593975287060976,"score_gpt":0.1685019622948174,"score_spread":0.1659079870077564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309664460","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984168,0.000014285204,5.7551965e-8,0.00070008734,0.00006775775,0.00069161184,0.00003379552,0.0000030387475,0.00007256745],"genre_scores_gemma":[0.99983615,0.000011259352,0.0000074665795,0.000022122109,0.0000052456426,0.000012109745,0.0000030036497,0.000004796821,0.0000978749],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998131,0.00068742846,0.00025216016,0.00016307409,0.0005566922,0.00020967681],"domain_scores_gemma":[0.99917775,0.0001441672,0.00017868463,0.00046957293,0.0000024262529,0.000027393147],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0017368828,0.00012428488,0.0001603012,0.000022664004,0.0008839101,0.000014312595,0.0007874712,0.000022059758,0.000066879904],"category_scores_gemma":[0.000017418011,0.000047106405,0.00006170989,0.00023930971,0.003606647,0.00006295716,0.0011992858,0.00029679146,0.0000042523975],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022495589,0.000070811046,0.004055247,0.0000068821264,0.000005836202,1.7488816e-7,0.0035990078,0.01187241,0.98007214,0.0000019242004,0.000009462472,0.00008116007],"study_design_scores_gemma":[0.00057981984,0.00015453271,0.32472673,0.00000987489,0.000011311343,0.000003882335,0.00027283755,0.00020590778,0.6739673,0.00001292281,0.0000038294575,0.000051039413],"about_ca_topic_score_codex":0.0005007964,"about_ca_topic_score_gemma":0.00007637387,"teacher_disagreement_score":0.3206715,"about_ca_system_score_codex":0.00016678096,"about_ca_system_score_gemma":0.000008645478,"threshold_uncertainty_score":0.999105},"labels":[],"label_agreement":null},{"id":"W4309766259","doi":"10.1016/j.jhazmat.2022.130439","title":"Biodegradation potential of residue generated during the in-situ burning of oil in the marine environment","year":2022,"lang":"en","type":"article","venue":"Journal of Hazardous Materials","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Fisheries and Oceans Canada; University of Manitoba; National Research Council Canada; Natural Sciences and Engineering Research Council of Canada; McGill University","funders":"Fisheries and Oceans Canada; University of Manitoba","keywords":"Microcosm; Biodegradation; Environmental chemistry; Hydrocarbon; Chemistry; Diesel fuel; Residue (chemistry); Polycyclic aromatic hydrocarbon; Naphthalene; AlkB; Organic chemistry","score_opus":0.00623154161546255,"score_gpt":0.18793394773098934,"score_spread":0.1817024061155268,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309766259","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99909073,0.000025077905,0.000002735791,0.00046654625,0.00018500937,0.000072034934,0.000017814655,0.0000010798458,0.00013897309],"genre_scores_gemma":[0.99958485,0.00013313368,0.00011796119,0.000047228026,0.000037083046,0.0000017097874,0.0000056240665,0.0000046702075,0.00006775622],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983713,0.00037780017,0.00064014026,0.00007983202,0.00041627782,0.000114632974],"domain_scores_gemma":[0.99921304,0.00002122091,0.0006282511,0.000115545074,0.000006639878,0.000015294681],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0015150858,0.00007221152,0.00018043569,0.000065867825,0.00006609864,0.000016426116,0.0002886625,0.00002435074,0.002575075],"category_scores_gemma":[0.000022175913,0.000042915937,0.000040450006,0.00014728132,0.00006118807,0.00007109587,0.00018570955,0.000107747925,0.000005287404],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015786539,0.00009019249,0.0077341367,0.000008975517,0.000006357228,0.000023093024,0.00044281225,0.0041560046,0.98677456,0.0000023576802,0.00008799607,0.0005156258],"study_design_scores_gemma":[0.00054835627,0.0000788716,0.2744104,0.0000090792355,0.000009325542,0.00006405337,0.00033219144,0.000011428047,0.7241738,0.000019942934,0.0002943726,0.000048195918],"about_ca_topic_score_codex":0.00021189322,"about_ca_topic_score_gemma":0.00008445636,"teacher_disagreement_score":0.26667625,"about_ca_system_score_codex":0.00012256541,"about_ca_system_score_gemma":0.000014477445,"threshold_uncertainty_score":0.99833673},"labels":[],"label_agreement":null},{"id":"W4310118470","doi":"10.1016/j.chemosphere.2022.137389","title":"A pH-responsive phosphoprotein washing fluid for the removal of phenanthrene from contaminated peat moss in the cold region","year":2022,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina; Memorial University of Newfoundland; Concordia University","funders":"Fisheries and Oceans Canada; Natural Sciences and Engineering Research Council of Canada; Environmental Studies Research Funds","keywords":"Chemistry; Environmental remediation; Phenanthrene; Environmental chemistry; Effluent; Peat; Contamination; Chemical oxygen demand; Pulp and paper industry; Wastewater; Environmental engineering; Environmental science; Ecology","score_opus":0.01331184526529786,"score_gpt":0.21256962882570596,"score_spread":0.1992577835604081,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310118470","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99613,0.00056809344,0.00009822666,0.0013532946,0.00012706815,0.00085607375,0.00009875179,0.0000133029,0.00075522263],"genre_scores_gemma":[0.9979648,0.000057507834,0.00027353637,0.00076501706,0.00002298682,0.00005356485,0.000028216778,0.000010848888,0.00082349626],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99894947,0.000095370444,0.00023266429,0.00024356996,0.00028239106,0.00019652449],"domain_scores_gemma":[0.99928814,0.00023180383,0.00014496516,0.00029793903,0.000012279186,0.000024869169],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00047331952,0.00011488414,0.00014464611,0.000004169696,0.00022951685,0.000020071322,0.00049065263,0.00004696836,0.0011928357],"category_scores_gemma":[0.000102347665,0.00007099173,0.00007341989,0.0003005427,0.0001410115,0.00006062045,0.00017731515,0.00015163208,0.000012948342],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00055316364,0.00013029607,0.0013183764,0.000008262455,0.000016043736,0.000023713434,0.00589142,0.0002611625,0.96780217,0.000039209226,0.010324592,0.013631606],"study_design_scores_gemma":[0.0022176509,0.00014410772,0.004889543,0.00003583518,0.00003854715,0.000023862629,0.017069884,0.0022729922,0.8915237,0.00016574562,0.08136312,0.0002549918],"about_ca_topic_score_codex":0.0016147253,"about_ca_topic_score_gemma":0.00047583057,"teacher_disagreement_score":0.07627843,"about_ca_system_score_codex":0.00015644114,"about_ca_system_score_gemma":0.000021813143,"threshold_uncertainty_score":0.9997202},"labels":[],"label_agreement":null},{"id":"W4310858520","doi":"10.58445/rars.76","title":"Harnessing M. luteus in an In-situ Bioremediation Technique to Reduce Environmental Contamination by Total Petroleum Hydrocarbons","year":2022,"lang":"en","type":"preprint","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hillsborough Hospital","funders":"","keywords":"Bioremediation; Contamination; Petroleum; Environmental chemistry; Environmental science; In situ; Waste management; Chemistry; Engineering; Biology; Ecology","score_opus":0.008817975972123828,"score_gpt":0.2356827495361443,"score_spread":0.22686477356402046,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310858520","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938101,0.000020364972,0.0004499981,0.00048121353,0.00036976495,0.0012120103,0.000112032234,0.00007023372,0.0034742553],"genre_scores_gemma":[0.99683696,0.00003272164,0.0009499752,0.0003231249,0.00003843364,0.0002167499,0.0010155598,0.000032525673,0.0005539698],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99725753,0.0002427963,0.0005852054,0.00093912083,0.0005680657,0.00040729417],"domain_scores_gemma":[0.999185,0.000024555944,0.0002210065,0.00039028318,0.0000019714535,0.0001771346],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006501908,0.00034446942,0.00030480753,0.00027951074,0.000082084065,0.00007907594,0.00042922725,0.00031911238,0.0027638967],"category_scores_gemma":[0.000028255705,0.00037854907,0.00006356809,0.0002989802,0.00008593843,0.00034526872,0.0009973983,0.00064341386,0.00013069704],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031614105,0.0003200894,0.0568773,0.0000058045075,0.000002469345,0.000009432472,0.00049001613,0.0007080673,0.93710905,0.00000276038,0.00058887695,0.0038545385],"study_design_scores_gemma":[0.0010157763,0.00023779462,0.61632943,0.00005991537,0.000016476732,0.000009688625,0.0007962306,0.0031402474,0.37481838,0.00010442652,0.0022346114,0.0012370277],"about_ca_topic_score_codex":0.0007352762,"about_ca_topic_score_gemma":0.0020740898,"teacher_disagreement_score":0.56229067,"about_ca_system_score_codex":0.0022940247,"about_ca_system_score_gemma":0.000039561255,"threshold_uncertainty_score":0.99986666},"labels":[],"label_agreement":null},{"id":"W4311480616","doi":"10.1134/s1067413622060030","title":"Environmental Technology Verification (ETV): Challenges to Verifying the Performance of Bioremediation Technologies","year":2022,"lang":"en","type":"article","venue":"Russian Journal of Ecology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Environmental remediation; Bioremediation; Environmental science; Process (computing); Computer science; European union; Environmental planning; Environmental resource management; Waste management; Contamination; Business; Engineering; Ecology","score_opus":0.009632910216094796,"score_gpt":0.19890822124704477,"score_spread":0.18927531103094997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4311480616","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9883137,0.000205408,0.000009548414,0.010797067,0.00030539124,0.00014466885,0.000008121141,0.0000146245675,0.00020150463],"genre_scores_gemma":[0.99874824,0.0006188262,0.0004811565,0.000100034915,0.000018828236,0.0000074595296,0.0000015354797,0.0000059533872,0.000017957615],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99905664,0.00007455584,0.00035691928,0.0001286153,0.00021688615,0.00016636589],"domain_scores_gemma":[0.99931854,0.000031780786,0.00043816332,0.00017762763,0.0000048966003,0.000029005136],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000500961,0.000081413746,0.00014937049,0.00016272427,0.00016957136,0.000003844539,0.00048174616,0.000073674826,0.0008420972],"category_scores_gemma":[0.000049451704,0.000060126204,0.000041871495,0.0002779925,0.00021528086,0.00008362784,0.00024964812,0.00023846333,0.000057170655],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011664114,0.00019570586,0.14321865,0.000008064129,0.000027171849,0.0000070382102,0.0010565904,0.0012978084,0.79701453,0.000356321,0.0005641144,0.056137368],"study_design_scores_gemma":[0.0006546444,0.0022866072,0.7804749,0.000009466135,0.000030454148,0.00020806232,0.0052501312,0.00019283245,0.17672884,0.00026794695,0.033683445,0.00021263663],"about_ca_topic_score_codex":0.0000011342936,"about_ca_topic_score_gemma":0.000009485645,"teacher_disagreement_score":0.63725626,"about_ca_system_score_codex":0.00022107085,"about_ca_system_score_gemma":0.000020095978,"threshold_uncertainty_score":0.9220374},"labels":[],"label_agreement":null},{"id":"W4311720172","doi":"10.3390/w14233980","title":"Bioremediation Treatment of Polyaromatic Hydrocarbons for Environmental Sustainability","year":2022,"lang":"en","type":"article","venue":"Water","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia, Okanagan Campus; University of British Columbia","funders":"Ministry of Science and Technology, Taiwan","keywords":"Bioremediation; Biodegradation; Microorganism; Petroleum; Pollutant; Environmental chemistry; Environmental science; Microbial biodegradation; Hydrocarbon; Environmental pollution; Contamination; Biostimulation; Pollution; Waste management; Polycyclic aromatic hydrocarbon; Energy source; Chemistry; Bacteria; Ecology; Environmental protection; Biology; Organic chemistry","score_opus":0.006592930725773719,"score_gpt":0.20297578010347272,"score_spread":0.196382849377699,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4311720172","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99847823,0.000006734183,0.000035385376,0.00052283966,0.00009274684,0.00050114124,0.00008286447,0.000012265898,0.000267795],"genre_scores_gemma":[0.9985352,0.000003029377,0.00011765697,0.000057945705,0.000014045452,0.000058770904,0.00013349226,0.0000065062286,0.0010733289],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993101,0.000038477432,0.00016564068,0.00016125174,0.00015666193,0.00016789156],"domain_scores_gemma":[0.9997697,0.000014173866,0.000044768865,0.00013282616,0.0000010182426,0.000037502577],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010989249,0.00007658201,0.00009205983,0.000021151141,0.00010882528,0.0000042428783,0.00007602032,0.00001911099,0.0033900135],"category_scores_gemma":[0.0000046837504,0.000053506905,0.00006365303,0.00003889279,0.000068399735,0.000044048884,0.00006875258,0.000017096785,0.00004949354],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056031255,0.0004865967,0.05851406,0.000005949056,0.000010873245,8.932163e-7,0.0015717688,0.00010171548,0.93372244,0.0000064988703,0.00047012695,0.005053076],"study_design_scores_gemma":[0.0015193656,0.0011426167,0.054144245,6.584961e-7,0.00003937558,0.0000037910422,0.00070549315,0.0010708561,0.8890306,0.0010769129,0.051021732,0.0002443821],"about_ca_topic_score_codex":0.0000685076,"about_ca_topic_score_gemma":0.000013677783,"teacher_disagreement_score":0.05055161,"about_ca_system_score_codex":0.00057742087,"about_ca_system_score_gemma":0.0000060068405,"threshold_uncertainty_score":0.99752104},"labels":[],"label_agreement":null},{"id":"W4311872464","doi":"10.1002/cjce.24802","title":"Response surface methodology ( <scp>RMS</scp> ) modelling to improve <i>n</i> ‐dodecane degradation using <i>Debaryomyces hansenii</i> <scp>LAF</scp> ‐3 in a simulated desalter effluent","year":2022,"lang":"en","type":"article","venue":"The Canadian Journal of Chemical Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Debaryomyces hansenii; Effluent; Dodecane; Response surface methodology; Chemistry; Wastewater; Salt (chemistry); Yeast; Chromatography; Environmental engineering; Nuclear chemistry; Environmental science; Biochemistry; Organic chemistry","score_opus":0.025749060167463162,"score_gpt":0.22740685200800673,"score_spread":0.20165779184054355,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4311872464","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99546623,0.00012299481,0.0034176875,0.0003910419,0.00032613636,0.00020994389,0.000029328174,0.000013656303,0.000023005425],"genre_scores_gemma":[0.99150056,0.000002873339,0.007707194,0.0006080139,0.000045031255,0.0000015839926,0.0000044740254,0.000032224674,0.00009807776],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980132,0.0002684695,0.00054535846,0.00024028104,0.0003614381,0.0005712826],"domain_scores_gemma":[0.9981502,0.0009140583,0.00019364216,0.00018460116,0.000033846074,0.0005236291],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021318689,0.00021101373,0.00029189762,0.00016270569,0.00014633697,0.000058469952,0.00048332757,0.00009829881,0.00005194703],"category_scores_gemma":[0.000863769,0.00018600654,0.00009443668,0.00064026774,0.00006383041,0.00014382957,0.000106874446,0.00059901754,0.000010426464],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015697286,0.0000063429957,0.00024573377,0.0000027772437,0.000008333407,0.000023255516,0.00062841736,0.49804345,0.50078344,0.0000015350898,0.00018736205,0.000053616153],"study_design_scores_gemma":[0.00056823285,0.00008133634,0.00013087047,0.00003169285,0.000028504228,0.00014291577,0.0001548353,0.29188251,0.7003227,0.00003502049,0.0065304213,0.00009098842],"about_ca_topic_score_codex":0.0039604697,"about_ca_topic_score_gemma":0.00059369364,"teacher_disagreement_score":0.20616093,"about_ca_system_score_codex":0.0011852757,"about_ca_system_score_gemma":0.00022282415,"threshold_uncertainty_score":0.7585127},"labels":[],"label_agreement":null},{"id":"W4312036273","doi":"10.56499/jppres19.628_7.6.413","title":"Optimizing the immobilization of biosurfactant-producing Pseudomonas aeruginosa in alginate beads","year":2019,"lang":"en","type":"article","venue":"Journal of Pharmacy & Pharmacognosy Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Kerman University of Medical Sciences","keywords":"Pseudomonas aeruginosa; Microbiology; Chemistry; Pseudomonas; Bacteria; Biology","score_opus":0.050860261273610076,"score_gpt":0.36658993887126423,"score_spread":0.31572967759765413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312036273","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99546474,0.00042129363,0.000026845646,0.0015488866,0.00048215207,0.00054957095,0.000009788479,0.00000744331,0.0014892527],"genre_scores_gemma":[0.9981721,0.0009860343,0.0003534492,0.0001674942,0.000111439316,0.0000024014237,0.0000025847778,0.00002094905,0.00018356334],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99630904,0.00065021263,0.00086844404,0.00030168716,0.0013287768,0.0005418372],"domain_scores_gemma":[0.9985406,0.00036648745,0.000468102,0.0002305364,0.0002269194,0.00016735008],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.005771521,0.00017730882,0.00030584176,0.00030676165,0.000113103495,0.00005497572,0.00082075264,0.000047979323,0.0055353576],"category_scores_gemma":[0.00019381916,0.00012260224,0.00013776246,0.0013690968,0.0002596419,0.00062116375,0.00030579156,0.00089175295,0.00029690587],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027564267,0.00018618742,0.1530205,0.000030614134,0.000022919789,0.00002177779,0.00094840984,0.0019321841,0.835575,0.0000043467057,0.0019304119,0.006052017],"study_design_scores_gemma":[0.0027284548,0.00012673945,0.013574962,0.00009165859,0.000022373699,0.00004269888,0.0004181388,0.004964057,0.96927553,0.00002241427,0.008566697,0.00016627707],"about_ca_topic_score_codex":0.00028754582,"about_ca_topic_score_gemma":0.000018920242,"teacher_disagreement_score":0.13944554,"about_ca_system_score_codex":0.00034717837,"about_ca_system_score_gemma":0.00012528998,"threshold_uncertainty_score":0.9953737},"labels":[],"label_agreement":null},{"id":"W4312092979","doi":"10.47193/mafis.3612023010109","title":"Monitoreo de contaminantes y detección de genes alkb en la Zona Común de Pesca Argentino-Uruguaya","year":2022,"lang":"es","type":"article","venue":"Marine and Fishery Sciences (MAFIS)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Humanities; Physics; Molecular biology; Biology; Art","score_opus":0.006541968914261774,"score_gpt":0.2171638151141362,"score_spread":0.21062184619987442,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312092979","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98924273,0.00031215133,0.000053914686,0.0015202591,0.00034609807,0.00023852446,0.00011657663,0.000046660683,0.008123062],"genre_scores_gemma":[0.99364215,0.0018240813,0.0011784915,0.0010336549,0.00014348284,0.0000169666,0.000016100084,0.000017949133,0.0021271245],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970434,0.0005087964,0.0003687288,0.0006531334,0.0005514571,0.000874537],"domain_scores_gemma":[0.999012,0.00025363025,0.00019036383,0.00022471527,0.00001321726,0.0003060509],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0021743944,0.00030544813,0.00028368097,0.00011075852,0.0010919977,0.0003956337,0.00079963054,0.00013061715,0.0048217806],"category_scores_gemma":[0.00009003594,0.0002844998,0.000110275345,0.000586883,0.00089630584,0.0003295664,0.0013015838,0.00034338344,0.00006862535],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030551353,0.00014088856,0.88482654,0.000025706026,0.000014428395,0.00005953186,0.00063831266,0.00007013122,0.048714966,0.00006978738,0.0020866173,0.063322514],"study_design_scores_gemma":[0.00040433434,0.0002532465,0.87349385,0.000017623988,0.000037458285,0.00022339658,0.0010895615,0.0036927077,0.009414696,0.0001915313,0.1107666,0.0004149655],"about_ca_topic_score_codex":0.0028155746,"about_ca_topic_score_gemma":0.0004283277,"teacher_disagreement_score":0.10867998,"about_ca_system_score_codex":0.0003038734,"about_ca_system_score_gemma":0.00017864567,"threshold_uncertainty_score":0.9999607},"labels":[],"label_agreement":null},{"id":"W4313468504","doi":"10.3390/su15010059","title":"Economical Di-Rhamnolipids Biosynthesis by Non-Pathogenic Burkholderia thailandensis E264 Using Post-Consumption Food Waste in a Biorefinery Approach","year":2022,"lang":"en","type":"article","venue":"Sustainability","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Innovation and Technology Commission - Hong Kong","keywords":"Biorefinery; Food waste; Bioprocess; Waste management; Bioreactor; Raw material; Environmental science; Pulp and paper industry; Municipal solid waste; Food science; Chemistry; Biofuel; Biology; Engineering; Organic chemistry","score_opus":0.010449677867518164,"score_gpt":0.2136953060689381,"score_spread":0.20324562820141995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313468504","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983481,0.00002914692,0.0000583869,0.00037498024,0.00013521123,0.00065896375,0.000248059,0.00003807779,0.000109072695],"genre_scores_gemma":[0.9993805,0.000006503706,0.00021467012,0.00016694693,0.000027566284,0.000036835605,0.00007366073,0.00001929792,0.00007397984],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99779356,0.0002999248,0.0004362039,0.00070577115,0.00025082153,0.0005137486],"domain_scores_gemma":[0.9992306,0.00005296775,0.00013878844,0.00042359575,0.000023793498,0.0001302199],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00088877336,0.00023060857,0.00027704795,0.000099984616,0.00024115045,0.000042602074,0.00030857523,0.00011466418,0.0016060595],"category_scores_gemma":[0.00014676858,0.00022786368,0.00013132913,0.0003711529,0.00023240462,0.00018627812,0.0005535646,0.00024608627,0.000023539878],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000170597,0.00055101333,0.49744216,0.00006057167,0.000014274154,0.0000038529565,0.0005909654,0.0012843432,0.4976787,0.000008650412,0.00042845547,0.0017664141],"study_design_scores_gemma":[0.0041763056,0.0010113395,0.84616685,0.000015929983,0.00012160024,0.0000699772,0.013765843,0.039652973,0.088375576,0.00067690917,0.0035346595,0.0024320642],"about_ca_topic_score_codex":0.0007101548,"about_ca_topic_score_gemma":0.00017122611,"teacher_disagreement_score":0.40930313,"about_ca_system_score_codex":0.0026966748,"about_ca_system_score_gemma":0.00010636888,"threshold_uncertainty_score":0.9993066},"labels":[],"label_agreement":null},{"id":"W4316591887","doi":"10.5296/emsd.v12i1.20677","title":"Advanced Nano-biotechnology for Chlorinated Volatile Compound Pollutants Control","year":2023,"lang":"en","type":"article","venue":"Environmental Management and Sustainable Development","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Environment and Climate Change Canada","funders":"","keywords":"Environmental remediation; Pollutant; Environmental science; Human health; Organic chemicals; Biochemical engineering; Biotechnology; Waste management; Environmental chemistry; Engineering; Contamination; Chemistry; Biology; Ecology; Medicine; Environmental health","score_opus":0.0041239978777652024,"score_gpt":0.1825464606926832,"score_spread":0.178422462814918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4316591887","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99480814,0.00005480688,0.00072116195,0.00057319365,0.00013685576,0.0015968779,0.00003403813,0.00018553059,0.0018894125],"genre_scores_gemma":[0.9703549,0.00018226626,0.0018202176,0.0002760496,0.000009857047,0.00011578194,0.00008591884,0.000023468148,0.027131505],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99819297,0.000017569511,0.0002947299,0.00049776555,0.00024618962,0.000750798],"domain_scores_gemma":[0.9996,0.000025115558,0.00008687497,0.00017573543,0.0000023248842,0.00010993272],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034032846,0.0002378041,0.00019642826,0.00013285204,0.00045282318,0.00004233746,0.00020277167,0.00009745123,0.0007158718],"category_scores_gemma":[0.000008070425,0.00022990537,0.000037469454,0.0003003565,0.00015906747,0.00017666895,0.00050618977,0.00006570091,0.00051428087],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013230485,0.00095751666,0.093806356,0.00059959805,0.0006444148,0.000728103,0.0027347207,0.0009572064,0.25367576,0.0054807463,0.031092832,0.6079997],"study_design_scores_gemma":[0.003915604,0.00014075139,0.33738968,0.000013471275,0.00003212452,0.0000051954403,0.0043165786,0.0008043552,0.020687295,0.00056762167,0.63149285,0.0006344917],"about_ca_topic_score_codex":0.0000062817257,"about_ca_topic_score_gemma":0.0000051597153,"teacher_disagreement_score":0.6073652,"about_ca_system_score_codex":0.0004073892,"about_ca_system_score_gemma":0.000007294082,"threshold_uncertainty_score":0.93752694},"labels":[],"label_agreement":null},{"id":"W4317436549","doi":"10.21203/rs.3.rs-2365484/v1","title":"Formulation of Synthetic Bacteria Consortia for Enzymatic Biodegradation of Polyaromatic Hydrocarbons contaminated soil: Soil Column Study","year":2023,"lang":"en","type":"preprint","venue":"Research Square","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; York University","funders":"","keywords":"Dioxygenase; Bioremediation; Biodegradation; Pyrene; Chemistry; Enzyme; Soil contamination; Rhodococcus; Environmental chemistry; Pseudomonas; Biotransformation; Stenotrophomonas; Bacteria; Biochemistry; Contamination; Organic chemistry; Biology","score_opus":0.07086660814967422,"score_gpt":0.35344001872886976,"score_spread":0.28257341057919555,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4317436549","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99458855,0.000016516302,0.00019798294,0.00016761948,0.0001766861,0.004178649,0.00049861555,0.000056066914,0.00011931317],"genre_scores_gemma":[0.9986915,0.000030110205,0.00020854063,0.0000044914013,0.000018288469,0.00017664194,0.00046251237,0.000038286147,0.000369644],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9965229,0.0005228291,0.0009370194,0.00053160614,0.0010500689,0.00043558129],"domain_scores_gemma":[0.9979323,0.0006416348,0.0005546061,0.000616555,0.00013627208,0.00011863854],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002274288,0.00023608141,0.000534658,0.00031599082,0.00012931696,0.000052730804,0.0004558383,0.00026427425,0.00042867797],"category_scores_gemma":[0.0009130012,0.00022114303,0.00015518,0.00057821715,0.00026897865,0.000097581484,0.00060812006,0.0002990336,0.000114998955],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035802744,0.0018510399,0.12408043,0.002858352,0.00025888777,0.0000056295344,0.004708672,0.0007093919,0.8608948,0.00006356205,0.001855764,0.0023554538],"study_design_scores_gemma":[0.0028455686,0.0019456485,0.66068065,0.0016962583,0.00021998021,0.0000020531397,0.004142637,0.0576859,0.26726922,0.0026907292,0.00006804625,0.0007533276],"about_ca_topic_score_codex":0.002193604,"about_ca_topic_score_gemma":0.0028099949,"teacher_disagreement_score":0.59362555,"about_ca_system_score_codex":0.00030461777,"about_ca_system_score_gemma":0.00014497674,"threshold_uncertainty_score":0.9017951},"labels":[],"label_agreement":null},{"id":"W4317509926","doi":"10.3390/ijms24031916","title":"An Overview on the Treatment of Oil Pollutants in Soil Using Synthetic and Biological Surfactant Foam and Nanoparticles","year":2023,"lang":"en","type":"review","venue":"International Journal of Molecular Sciences","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Pulmonary surfactant; Environmental remediation; Pollutant; Soil contamination; Nanoparticle; Pollution; Contamination; Soil remediation; Environmental science; Environmental chemistry; Chemical engineering; Chemistry; Materials science; Soil water; Nanotechnology; Soil science; Organic chemistry","score_opus":0.1417410113752068,"score_gpt":0.36901013375672453,"score_spread":0.22726912238151772,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4317509926","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.681163,0.3185145,7.199039e-7,0.00011370654,0.00011288095,0.000050938015,0.000023534503,0.0000015898511,0.000019151965],"genre_scores_gemma":[0.19855843,0.8013008,0.00008605205,0.000035719182,0.000011805004,5.1676733e-7,3.5847805e-7,0.0000037378109,0.0000025582262],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99864554,0.0002020204,0.00043323173,0.00018319921,0.0004210584,0.00011497352],"domain_scores_gemma":[0.9993214,0.00014394814,0.00039645866,0.00006760257,0.000014993743,0.00005558095],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006332319,0.00013193507,0.0003462134,0.000107395004,0.00004419618,0.000058017402,0.0003529407,0.00005596771,0.00006304714],"category_scores_gemma":[0.000065224805,0.0000652285,0.00009011099,0.00021456454,0.0003970419,0.00007609278,0.000056681816,0.00006067133,0.0000048554857],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001566855,0.00021531763,0.0007712925,0.00005343598,0.000060799302,0.00010823293,0.00018865067,0.000105306004,0.02802847,0.00013455484,0.0000016641574,0.9703166],"study_design_scores_gemma":[0.014010603,0.0409008,0.079773724,0.13991779,0.0037017856,0.011014076,0.0062233256,0.018040642,0.1876672,0.013933725,0.4747827,0.010033626],"about_ca_topic_score_codex":0.00005445079,"about_ca_topic_score_gemma":0.000038539318,"teacher_disagreement_score":0.960283,"about_ca_system_score_codex":0.00010019576,"about_ca_system_score_gemma":0.000053504406,"threshold_uncertainty_score":0.2659941},"labels":[],"label_agreement":null},{"id":"W4317876121","doi":"10.1007/978-3-031-21682-4_3","title":"Sustainable Production of Biosurfactants Using Waste Substrates","year":2023,"lang":"en","type":"book-chapter","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Rhamnolipid; Waste management; Surfactin; Food waste; Food industry; Environmental science; Biodegradation; Cleaner production; Environmental remediation; Pulp and paper industry; Municipal solid waste; Chemistry; Food science; Contamination; Engineering","score_opus":0.02656139534676527,"score_gpt":0.2250779367276663,"score_spread":0.19851654138090102,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4317876121","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33859515,0.000033388817,0.000005832421,0.00016273551,0.0009068417,0.0007716147,0.00005001852,0.00016061951,0.6593138],"genre_scores_gemma":[0.12726507,0.00011982572,0.0002175816,0.000021175945,0.000060629707,4.503204e-7,0.000027817188,0.0000408376,0.8722466],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985803,0.000010097308,0.0003779052,0.00040375695,0.0003498994,0.00027807418],"domain_scores_gemma":[0.99933213,0.000013942824,0.00028304386,0.00026183046,0.000038568007,0.00007046077],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00024192788,0.00023815912,0.00025581036,0.00008419352,0.00007246948,0.000019310663,0.00016846845,0.00023749209,0.0069104526],"category_scores_gemma":[0.00002995082,0.00020433533,0.0000922052,0.000113624614,0.0001996673,0.00014289153,0.00016797756,0.00012737424,0.0011195753],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005502531,0.000059659662,0.0022547885,0.0002333637,0.00008966769,0.00004285515,0.0002409078,0.00057713623,0.9650043,0.00664431,0.023400806,0.0013971485],"study_design_scores_gemma":[0.0005814204,0.00022402093,0.001803421,0.0003379169,0.00020599001,0.000026916729,0.0010396594,0.00038122258,0.9277948,0.009363089,0.056342583,0.001898952],"about_ca_topic_score_codex":0.00028862088,"about_ca_topic_score_gemma":0.00018122292,"teacher_disagreement_score":0.21293283,"about_ca_system_score_codex":0.00016954298,"about_ca_system_score_gemma":0.000035292174,"threshold_uncertainty_score":0.99965817},"labels":[],"label_agreement":null},{"id":"W4318065308","doi":"10.1016/j.scitotenv.2023.161777","title":"Impacts of Arctic diesel contamination on microbial community composition and degradative gene abundance during hydrocarbon biodegradation with and without nutrients: A case study of seven sub-Arctic soils","year":2023,"lang":"en","type":"article","venue":"The Science of The Total Environment","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Hydro-Québec","keywords":"Environmental chemistry; Biodegradation; Soil water; Nutrient; Microbial population biology; Proteobacteria; Chemistry; Environmental science; Ecology; Biology; Bacteria","score_opus":0.011761343676668617,"score_gpt":0.2189943319523277,"score_spread":0.20723298827565909,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318065308","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99920666,0.0000068707322,0.0000038504595,0.000102711994,0.000025466443,0.00062077626,0.000019775458,0.0000055053265,0.000008406975],"genre_scores_gemma":[0.9998937,0.000032712403,0.00003933213,0.0000060900666,0.0000028915545,0.000004763438,0.0000027510505,0.0000051909346,0.000012542738],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987761,0.00020521176,0.00022683696,0.0001924721,0.00044265317,0.00015677589],"domain_scores_gemma":[0.99927133,0.000059261307,0.00031713475,0.0002922829,0.000011848934,0.000048120048],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071873405,0.0001186037,0.00014947455,0.00005539994,0.0003979128,0.000014792514,0.00019757268,0.000021979824,0.000006075826],"category_scores_gemma":[0.000030648083,0.000070149224,0.000018668501,0.00036869812,0.0014771246,0.00017693211,0.00030997882,0.00011232191,0.0000022524694],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000119834905,0.00034157163,0.020897003,0.000025398742,0.0000142549725,0.0000013662547,0.006951658,0.002030285,0.96944755,0.0000020206742,6.038201e-7,0.00016846435],"study_design_scores_gemma":[0.0007530212,0.00044991617,0.5351307,0.00005628253,0.00003237214,0.000060556868,0.0028070807,0.00084277964,0.459782,0.000014836664,6.162973e-8,0.00007044334],"about_ca_topic_score_codex":0.0021015126,"about_ca_topic_score_gemma":0.00016673176,"teacher_disagreement_score":0.51423365,"about_ca_system_score_codex":0.00017603968,"about_ca_system_score_gemma":0.000010419715,"threshold_uncertainty_score":0.54425275},"labels":[],"label_agreement":null},{"id":"W4318197715","doi":"10.1111/wej.12850","title":"Continuous cultivation of <scp><i>Debaryomyces hansenii</i></scp> (LAF‐3 10 U) on dodecane in synthetic desalter effluent at varying dilution rates on dodecane","year":2023,"lang":"en","type":"article","venue":"Water and Environment Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Debaryomyces hansenii; Dilution; Effluent; Halotolerance; Bioreactor; Chemistry; Dodecane; Biodegradation; Wastewater; Chromatography; Yeast; Substrate (aquarium); Environmental engineering; Salinity; Environmental science; Biology; Nuclear chemistry; Ecology; Biochemistry; Organic chemistry","score_opus":0.011086958573849172,"score_gpt":0.21057928098685616,"score_spread":0.199492322413007,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318197715","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99844444,0.000023416032,0.000019656653,0.00046372745,0.00012763443,0.00017807368,0.000011865127,0.000015473983,0.00071568595],"genre_scores_gemma":[0.99721116,0.0006257224,0.000056995952,0.00016438276,0.0000394688,0.0000049733458,0.00003862198,0.0000154774,0.0018432054],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99842125,0.000113428265,0.000392224,0.0002991886,0.0003990681,0.00037485285],"domain_scores_gemma":[0.999528,0.0000818666,0.00012961972,0.00013004875,0.0000035509147,0.00012690164],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000501109,0.00019641704,0.00020354123,0.000115063194,0.00016572133,0.0000399452,0.000115498995,0.00008406627,0.00085843384],"category_scores_gemma":[0.000024530951,0.00013169157,0.000056600747,0.00009141905,0.00013674832,0.0001315386,0.00011424785,0.00015898058,0.0008741805],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010065621,0.00015800605,0.057963833,0.000013046553,0.000015279513,0.000026755803,0.0013268095,0.0049119773,0.9299916,0.0000020919824,0.0018392905,0.0036506688],"study_design_scores_gemma":[0.0012821464,0.00036870164,0.1882915,0.00009970002,0.000019016928,0.000031346975,0.00012404453,0.0006337831,0.7998324,0.00012380208,0.009049745,0.00014381394],"about_ca_topic_score_codex":0.000025846724,"about_ca_topic_score_gemma":0.000012761195,"teacher_disagreement_score":0.13032767,"about_ca_system_score_codex":0.00024996852,"about_ca_system_score_gemma":0.0000030191316,"threshold_uncertainty_score":0.99990374},"labels":[],"label_agreement":null},{"id":"W4318617276","doi":"10.1007/s00128-022-03672-7","title":"Surfactant-Containing Foam Effectively Enhanced the Removal of Polycyclic Aromatic Hydrocarbons from Heavily Contaminated Soil","year":2023,"lang":"en","type":"article","venue":"Bulletin of Environmental Contamination and Toxicology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakehead University","funders":"Key Technologies Research and Development Program","keywords":"Phenanthrene; Naphthalene; Pulmonary surfactant; Rhamnolipid; Chemistry; Environmental remediation; Environmental chemistry; Soil contamination; Volatilisation; Adsorption; Contamination; Polycyclic aromatic hydrocarbon; Leaching (pedology); Soil water; Organic chemistry; Environmental science; Bacteria; Geology","score_opus":0.007026336999280472,"score_gpt":0.20516418460735428,"score_spread":0.1981378476080738,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318617276","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954032,0.00008439736,0.000043534183,0.00078468956,0.00013393445,0.00041895488,0.000050354152,0.00003422874,0.003046748],"genre_scores_gemma":[0.9986786,0.00013863972,0.00008604221,0.0003269444,0.000014137516,0.000013609275,0.00006402444,0.000016144779,0.00066185545],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983992,0.0002726994,0.00045963773,0.0003377516,0.00026887286,0.000261837],"domain_scores_gemma":[0.9988551,0.0005310638,0.0003461126,0.00018988516,0.0000012400103,0.000076591496],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00043591636,0.00019315942,0.00032483792,0.0000616617,0.000119012155,0.000009653703,0.00019155077,0.00015351051,0.0012234879],"category_scores_gemma":[0.000100719946,0.00015754178,0.00007498148,0.00013523122,0.0005923783,0.000039006092,0.00017022532,0.00013180649,0.0002872129],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000119755205,0.00012616378,0.010322681,0.000004435205,0.000038234673,0.000011421754,0.0007455284,0.000005321156,0.9733944,0.000019336354,0.00027265077,0.014940107],"study_design_scores_gemma":[0.0014945378,0.00046546222,0.75705606,0.00002103517,0.000043244494,0.000014303295,0.0008296737,0.00030926778,0.23542593,0.00012562751,0.004029656,0.00018520659],"about_ca_topic_score_codex":0.0003636236,"about_ca_topic_score_gemma":0.00018396889,"teacher_disagreement_score":0.74673337,"about_ca_system_score_codex":0.00010319112,"about_ca_system_score_gemma":0.000008197318,"threshold_uncertainty_score":0.9996895},"labels":[],"label_agreement":null},{"id":"W4319603579","doi":"10.31080/asmi.2023.06.1201","title":"Preliminary Screening of Biosurfactants Produced by a Pseudomonas sp. Isolated from Mud Drill Cuttings","year":2023,"lang":"en","type":"article","venue":"ACTA SCIENTIFIC MICROBIOLOGY","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Drill cuttings; Cutting; Pseudomonas; Drill; Biology; Botany; Bacteria; Engineering; Drilling; Drilling fluid; Paleontology; Mechanical engineering","score_opus":0.012328051288496499,"score_gpt":0.21949761576199453,"score_spread":0.20716956447349802,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319603579","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996395,0.000049928098,0.000033853506,0.00097129215,0.00091533724,0.00042155926,0.00088492833,0.0001735274,0.00015458983],"genre_scores_gemma":[0.99557877,0.000024367151,0.00076305127,0.00022612337,0.00002916203,0.000004196974,0.0011990757,0.000026991043,0.00214824],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997203,0.00016305342,0.00061917887,0.0011057566,0.00020278516,0.0007062455],"domain_scores_gemma":[0.9986794,0.00012965543,0.00038832027,0.0006043431,0.000046529804,0.00015175877],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000809032,0.00029008926,0.00036580273,0.00015453823,0.00028249566,0.00006710355,0.0007247258,0.00026391787,0.0036710484],"category_scores_gemma":[0.00016390963,0.0002559542,0.00011556918,0.0014284075,0.00084878353,0.00022380441,0.000558168,0.00019254253,0.002119608],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007719377,0.000072565876,0.011225822,0.0000057274033,0.000022436103,0.0000044479793,0.00044282307,0.0000064409446,0.81598085,6.231846e-7,0.17142045,0.00074061897],"study_design_scores_gemma":[0.0005823612,0.00014526786,0.009524239,0.000032599735,0.000023650276,0.000011320521,0.00011616406,0.0004885189,0.93206036,0.000024909672,0.056632042,0.00035855107],"about_ca_topic_score_codex":0.00033314052,"about_ca_topic_score_gemma":0.000058614147,"teacher_disagreement_score":0.11607953,"about_ca_system_score_codex":0.00006536922,"about_ca_system_score_gemma":0.000032670763,"threshold_uncertainty_score":0.9999893},"labels":[],"label_agreement":null},{"id":"W4319779349","doi":"10.1016/b978-0-323-91697-4.00004-1","title":"Rhamnolipids—Has the promise come true?","year":2023,"lang":"en","type":"book-chapter","venue":"Elsevier eBooks","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Non-renewable resource; Renewable resource; Biochemical engineering; Natural resource economics; Environmental science; Business; Renewable energy; Engineering; Economics","score_opus":0.024148486043583123,"score_gpt":0.21740205930572581,"score_spread":0.19325357326214268,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319779349","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0004447725,0.000041411095,2.632261e-7,0.0007579695,0.0007401001,0.0007863376,0.00008834332,0.00013217657,0.9970086],"genre_scores_gemma":[0.0026121105,0.0000844438,0.0000360227,0.001058235,0.00026622662,0.000015422524,0.000032094027,0.000077046774,0.9958184],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99824226,0.000034203553,0.00039692686,0.00048308898,0.00049766526,0.00034584483],"domain_scores_gemma":[0.99893624,0.000058635098,0.00023159344,0.000622394,0.000011887489,0.00013924454],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003580001,0.000373321,0.00031841887,0.00004164055,0.0002494504,0.000091738344,0.0006011901,0.00029765198,0.0072158305],"category_scores_gemma":[0.000021967247,0.00024516182,0.00020970516,0.000028759328,0.00055482594,0.00003541123,0.0004051913,0.00043558422,0.022166997],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001822992,0.000010332106,0.00008527696,0.000023735402,0.000052288342,0.00002316708,0.0004509253,0.0000012543718,0.0029304507,0.0006268894,0.019964347,0.9758131],"study_design_scores_gemma":[0.00019935783,0.000028663935,0.00038329026,0.000059040696,0.000041927167,0.000006805562,0.0000058961855,0.0000052620317,0.00029030244,0.0021937708,0.9964455,0.00034021726],"about_ca_topic_score_codex":0.0000028705608,"about_ca_topic_score_gemma":0.00019260995,"teacher_disagreement_score":0.97648114,"about_ca_system_score_codex":0.00014677059,"about_ca_system_score_gemma":0.000038465205,"threshold_uncertainty_score":0.99974096},"labels":[],"label_agreement":null},{"id":"W4319782931","doi":"10.1016/b978-0-323-91697-4.00013-2","title":"Challenges and prospects for microbial biosurfactant research","year":2023,"lang":"en","type":"book-chapter","venue":"Elsevier eBooks","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Biochemical engineering; Bioprocess; Biotechnology; Nanotechnology; Chemistry; Engineering; Biology; Materials science","score_opus":0.07710068014015004,"score_gpt":0.2930449574659581,"score_spread":0.21594427732580807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319782931","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000866382,0.00074566226,1.6059255e-7,0.00055159535,0.0003921667,0.001609697,0.00016268648,0.00009820408,0.99557346],"genre_scores_gemma":[0.0029041497,0.0028735136,0.00030163318,0.0001255218,0.00023207042,0.000030102952,0.000032225613,0.00010572682,0.99339503],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977865,0.000036523114,0.0003550152,0.00082519324,0.00046774058,0.0005289779],"domain_scores_gemma":[0.9991004,0.0001423061,0.00014104527,0.0003840067,0.000044795874,0.00018745942],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010031887,0.00034755786,0.0003782004,0.000117250864,0.00021108569,0.000059583115,0.00030133553,0.0004274912,0.00043291654],"category_scores_gemma":[0.00005623519,0.00030410234,0.00012119736,0.000022571838,0.00051531557,0.000041599178,0.0004455535,0.00040337158,0.0018332035],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038734906,0.000010787023,0.000009665036,0.00011171799,0.00003368341,0.000013704926,0.0004562348,7.569327e-8,0.026113067,0.0024257295,0.0028416037,0.967945],"study_design_scores_gemma":[0.00035632993,0.0001521832,0.00031333487,0.00017127112,0.000023736102,0.000008433611,0.000016843618,0.0000026523321,0.002111616,0.009038646,0.98739624,0.00040873094],"about_ca_topic_score_codex":0.0000013647572,"about_ca_topic_score_gemma":0.00046329785,"teacher_disagreement_score":0.98455465,"about_ca_system_score_codex":0.00016722443,"about_ca_system_score_gemma":0.00003970584,"threshold_uncertainty_score":0.9999411},"labels":[],"label_agreement":null},{"id":"W4319984891","doi":"10.3389/fmicb.2022.1005871","title":"Increasing in situ bioremediation effectiveness through field-scale application of molecular biological tools","year":2023,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Imperial Oil (Canada)","funders":"Imperial Oil Limited","keywords":"Bioremediation; In situ; Scale (ratio); Biochemical engineering; Environmental science; Field (mathematics); Computational biology; Computer science; Biology; Environmental chemistry; Chemistry; Ecology; Engineering; Mathematics; Contamination; Geography; Cartography","score_opus":0.009547944816968896,"score_gpt":0.2349880622400243,"score_spread":0.22544011742305542,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319984891","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994499,0.000039241495,0.004344586,0.00012900897,0.00026567891,0.00037042997,0.000018573717,0.000027734162,0.0003056908],"genre_scores_gemma":[0.99619913,0.00008337295,0.0033437156,0.00016301229,0.000010530214,0.000015892103,0.00017476075,0.0000059089384,0.0000036745307],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99879235,0.00031534414,0.00028755952,0.00031396665,0.00004524365,0.0002455219],"domain_scores_gemma":[0.9996029,0.00013075778,0.00009737988,0.00014037151,0.000007019404,0.000021549962],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059539947,0.000108905566,0.00023315124,0.00010070838,0.000019751096,0.0000047871777,0.00018079982,0.0002355936,0.00004317126],"category_scores_gemma":[0.00014169274,0.00009846259,0.000040970335,0.00066261215,0.000148144,0.00008387679,0.00011202184,0.00011292333,0.00009194989],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053729385,0.000029230767,0.37800252,0.00000577969,0.0000021560809,0.0000019880554,0.00009684526,0.00006542935,0.61761546,0.000005841947,0.00029346065,0.0038275197],"study_design_scores_gemma":[0.00047452166,0.00006371494,0.36206284,0.000013830509,0.000002470459,0.000003225462,0.0000847827,0.00012224283,0.635771,0.00038640384,0.0008897257,0.00012525314],"about_ca_topic_score_codex":0.0002313574,"about_ca_topic_score_gemma":0.00015583246,"teacher_disagreement_score":0.018155506,"about_ca_system_score_codex":0.00013435604,"about_ca_system_score_gemma":0.000008552877,"threshold_uncertainty_score":0.4015188},"labels":[],"label_agreement":null},{"id":"W4320004419","doi":"10.2139/ssrn.4340982","title":"Aerobic Biodegradation of Cycloalkanes in Non-Aqueous Extracted Oil Sands Tailings","year":2023,"lang":"en","type":"article","venue":"SSRN Electronic Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Oil sands; Tailings; Biodegradation; Aqueous solution; Chemistry; Environmental science; Waste management; Environmental chemistry; Materials science; Organic chemistry; Engineering; Composite material","score_opus":0.0050427350090989035,"score_gpt":0.21277510710755457,"score_spread":0.20773237209845566,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4320004419","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99871874,0.00009079864,0.00004604728,0.0003793927,0.00011487512,0.000046195135,0.0000023196114,0.000024607967,0.0005770214],"genre_scores_gemma":[0.99499494,0.003275658,0.000046287103,0.000041714575,0.00003737085,0.0000011174552,0.000017709624,0.0000100255465,0.0015751777],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99821925,0.00004480166,0.00033431163,0.00016562518,0.0002548796,0.0009811145],"domain_scores_gemma":[0.9996256,0.000030674008,0.00017916864,0.000097976605,0.000012991307,0.000053540472],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010409304,0.00010537648,0.00013820858,0.00013084034,0.00006664873,0.000017991859,0.00020062875,0.0000848293,0.00029216512],"category_scores_gemma":[0.000062478255,0.00009397283,0.00005784896,0.00071200356,0.000062503874,0.00017243516,0.000041003765,0.00055104657,0.0003207921],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045852143,0.00006955309,0.026622586,0.000005355132,0.000013470906,0.000006235428,0.00023970233,0.00015135795,0.8837951,0.000084629886,0.00030829426,0.08865791],"study_design_scores_gemma":[0.009212949,0.0015817655,0.60375476,0.00028238472,0.00011395604,0.0009199729,0.005574732,0.0075517795,0.3308574,0.024736091,0.0132802,0.0021340328],"about_ca_topic_score_codex":0.0003211245,"about_ca_topic_score_gemma":0.003005881,"teacher_disagreement_score":0.57713217,"about_ca_system_score_codex":0.0004908467,"about_ca_system_score_gemma":0.0001658735,"threshold_uncertainty_score":0.41232407},"labels":[],"label_agreement":null},{"id":"W4321352002","doi":"10.1007/s11368-023-03466-2","title":"Assessment of heavily weathered petroleum hydrocarbon-impacted soils to native soil invertebrates from a Canadian subarctic site","year":2023,"lang":"en","type":"article","venue":"Journal of Soils and Sediments","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Royal Military College of Canada; EcoMetrix; Axdev Group (Canada); Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Soil water; Environmental chemistry; Weathering; Environmental science; Subarctic climate; Invertebrate; Contamination; Ecology; Geology; Chemistry; Soil science; Biology; Geochemistry","score_opus":0.009413472934434624,"score_gpt":0.23959493295447368,"score_spread":0.23018146002003906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4321352002","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99775577,0.000029556595,0.000005886408,0.0009314082,0.00021232026,0.000102865335,0.00010622816,0.000007279604,0.00084867503],"genre_scores_gemma":[0.9987845,0.00009590715,0.00016527768,0.0007261909,0.000047321246,9.700576e-7,0.000014574037,0.00001072407,0.00015454939],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986016,0.000066927634,0.00041868567,0.00016842144,0.0004489879,0.00029537393],"domain_scores_gemma":[0.9990399,0.00004692613,0.00026765585,0.00010010125,0.000035601617,0.0005098362],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003771499,0.00014448294,0.00027831626,0.0001724904,0.000079396814,0.000042167147,0.00015481519,0.00007323202,0.00058247085],"category_scores_gemma":[0.000042940468,0.00011454449,0.000070196285,0.00035463783,0.00006120969,0.0001920702,0.00006763956,0.00014687283,0.000082074876],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042395524,0.000083764746,0.4515538,0.000008921381,0.00011074958,0.000037779108,0.0014771946,0.00047585243,0.5399924,0.0000030625038,0.0053456174,0.0008684414],"study_design_scores_gemma":[0.0012357368,0.00040875163,0.96676195,0.000094183386,0.00004596209,0.000007048471,0.00043909514,0.005701141,0.024263736,0.00016859757,0.0006698118,0.00020400867],"about_ca_topic_score_codex":0.030875465,"about_ca_topic_score_gemma":0.021379277,"teacher_disagreement_score":0.5157287,"about_ca_system_score_codex":0.0002744955,"about_ca_system_score_gemma":0.00013409302,"threshold_uncertainty_score":0.996478},"labels":[],"label_agreement":null},{"id":"W4321352086","doi":"10.1007/s10532-023-10019-4","title":"Biodegradation of 1,4-dioxane by a native digestate microbial community under different electron accepting conditions","year":2023,"lang":"en","type":"article","venue":"Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biodegradation; Digestate; Microbial population biology; Chemistry; Environmental chemistry; 1,4-Dioxane; Microbiology; Bacteria; Organic chemistry; Biology; Methane; Anaerobic digestion","score_opus":0.019168322386841304,"score_gpt":0.2607967735671115,"score_spread":0.2416284511802702,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4321352086","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99735767,0.0000071189875,0.00039065766,0.0005703554,0.00012595735,0.0002972988,0.0006011,0.0001221254,0.0005277107],"genre_scores_gemma":[0.9953474,0.00007187309,0.00009498867,0.000111300265,0.000016652866,0.000008871519,0.0036922586,0.000013493621,0.0006431825],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99862957,0.0002465651,0.00035143833,0.00022134848,0.0002788777,0.00027219907],"domain_scores_gemma":[0.99932593,0.000106098174,0.00026201326,0.00020825927,0.000029307103,0.00006837244],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032345534,0.0001726835,0.00016800601,0.00009943577,0.00029838877,0.00003707448,0.00020881034,0.00009686856,0.00067519397],"category_scores_gemma":[0.00005866459,0.0001546385,0.000063450265,0.00063325086,0.00016774767,0.0002727567,0.00010927077,0.00018830036,0.0002942902],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019703684,0.00013533568,0.0071267397,0.000008637534,0.000013939874,1.7458683e-7,0.00040293083,0.00003383576,0.9762449,0.000050691386,0.014433037,0.0015300548],"study_design_scores_gemma":[0.0005757305,0.000116301926,0.17127146,0.000019024346,0.000021972219,0.0000014876363,0.00042912312,0.00039413272,0.8246541,0.00028854594,0.0019836612,0.0002444688],"about_ca_topic_score_codex":0.0006030467,"about_ca_topic_score_gemma":0.00073844375,"teacher_disagreement_score":0.16414472,"about_ca_system_score_codex":0.00022203464,"about_ca_system_score_gemma":0.0000145375325,"threshold_uncertainty_score":0.73929},"labels":[],"label_agreement":null},{"id":"W4321792814","doi":"10.1016/j.jhazmat.2023.131078","title":"Evaluation of scale-up effect on cold-active enzyme production and biodegradation tests using pilot-scale bioreactors and a 3D soil tank","year":2023,"lang":"en","type":"article","venue":"Journal of Hazardous Materials","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"TechnoRem (Canada); Institut National de la Recherche Scientifique; York University","funders":"","keywords":"Biodegradation; Bioreactor; Chemistry; Xylene; Bioremediation; Environmental chemistry; Chromatography; Bacteria; Organic chemistry; Biology; Toluene","score_opus":0.03147317160151165,"score_gpt":0.2784479807108559,"score_spread":0.24697480910934427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4321792814","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99864084,0.000017835288,0.0000038602207,0.00011215445,0.000803229,0.0003400024,0.000041036397,0.000011738941,0.000029309305],"genre_scores_gemma":[0.9996469,0.000070969,0.00012605615,0.000016054695,0.00010338308,0.0000017923948,0.000006133746,0.000010242649,0.0000184443],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983666,0.0003253054,0.0003937822,0.00017629955,0.0006065117,0.00013153044],"domain_scores_gemma":[0.9991451,0.000048996822,0.0005657073,0.000087688524,0.0000885903,0.00006391205],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026348107,0.0001245097,0.00025095444,0.00012685292,0.00007464686,0.000047333346,0.000055520773,0.0000609519,0.00016776906],"category_scores_gemma":[0.0003195646,0.00009376313,0.000024915958,0.00021038363,0.00011264277,0.00026596928,0.000040785646,0.0000526854,0.000018749577],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023657644,0.000044382075,0.0039309408,0.000020398416,0.000016426638,0.0000010721,0.00022107946,0.00009503837,0.98936975,2.7971146e-7,0.00024546395,0.005818585],"study_design_scores_gemma":[0.00058317283,0.0006378893,0.109268196,0.000085324966,0.000105822524,0.00003184976,0.00004446264,0.00016198373,0.88893545,0.000019826337,0.000037354224,0.000088662666],"about_ca_topic_score_codex":0.00007428074,"about_ca_topic_score_gemma":0.00005958316,"teacher_disagreement_score":0.105337255,"about_ca_system_score_codex":0.0001712882,"about_ca_system_score_gemma":0.000032838558,"threshold_uncertainty_score":0.38235494},"labels":[],"label_agreement":null},{"id":"W4322700688","doi":"10.1134/s000368380804008x","title":"Degradation of hydrocarbons and their derivatives by a microbial association on the base of Canadian pondweed","year":2008,"lang":"en","type":"article","venue":"Applied Biochemistry and Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Naphthalene; Chemistry; Microbial biodegradation; Pollutant; Biodegradation; Pseudomonas fluorescens; Environmental chemistry; Phenol; Pseudomonas; Elodea canadensis; Microorganism; Botany; Food science; Biology; Organic chemistry; Aquatic plant; Bacteria; Ecology","score_opus":0.006635082765114938,"score_gpt":0.15884606391878384,"score_spread":0.1522109811536689,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4322700688","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975673,0.000030784693,0.0000031566956,0.00063392555,0.000014257468,0.00010957239,0.00022082408,0.00000389909,0.0014162775],"genre_scores_gemma":[0.99913603,0.00008922927,0.00005000025,0.0003745632,0.000006506825,0.0000020525983,0.00011560759,0.00000340269,0.00022259439],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995012,0.000024340949,0.0001475635,0.00016966669,0.000023836752,0.00013335941],"domain_scores_gemma":[0.99964905,0.0000756803,0.00013734098,0.000084417945,0.000005837008,0.00004768038],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011849663,0.00009660944,0.00011942525,0.000026486903,0.00008594078,0.0000027089607,0.00007512446,0.00013128752,0.00009940047],"category_scores_gemma":[0.00003092852,0.00006645147,0.000018444556,0.00013608189,0.0003090842,0.000011897933,0.00003457976,0.000067528315,0.0000042488814],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017879622,0.00002306556,0.0024972835,0.0000036690706,0.000012492286,1.4793284e-7,0.000204385,1.3567333e-7,0.99105376,0.00001903266,0.006033657,0.00013449654],"study_design_scores_gemma":[0.00020554742,0.000022554239,0.0013981219,0.0000035724747,0.000004446213,0.000009158801,0.000105196224,0.000001664706,0.9959822,0.000012451295,0.002183123,0.00007191126],"about_ca_topic_score_codex":0.0021007038,"about_ca_topic_score_gemma":0.0009534457,"teacher_disagreement_score":0.004928497,"about_ca_system_score_codex":0.000046034915,"about_ca_system_score_gemma":0.000022472495,"threshold_uncertainty_score":0.317565},"labels":[],"label_agreement":null},{"id":"W4361245480","doi":"10.1016/j.jwpe.2023.103597","title":"Continuous fixed-bed column studies to remove polycyclic aromatic hydrocarbons by degrading enzymes immobilized on polyimide aerogels","year":2023,"lang":"en","type":"article","venue":"Journal of Water Process Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; York University","funders":"Natural Sciences and Engineering Research Council of Canada; Université Laval","keywords":"Aerogel; Naphthalene; Anthracene; Chemistry; Immobilized enzyme; Dibenzothiophene; Adsorption; Biodegradation; Polyimide; Organic chemistry; Chemical engineering; Polycyclic aromatic hydrocarbon; Chromatography; Materials science; Flue-gas desulfurization; Enzyme; Composite material","score_opus":0.011543818142024247,"score_gpt":0.24616059999452655,"score_spread":0.23461678185250232,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4361245480","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985298,0.0001357526,0.000055227156,0.0006277634,0.00033905968,0.00017032523,0.0000033944568,0.00007257139,0.00006614083],"genre_scores_gemma":[0.9989753,0.000058469504,0.00026463164,0.00021028773,0.000063376625,0.0000058065643,0.0000027732933,0.000026638092,0.00039276492],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984993,0.000022875878,0.00050362374,0.00018723706,0.00038506166,0.00040191814],"domain_scores_gemma":[0.999481,0.00007247206,0.00014399936,0.00011202283,0.0000066905195,0.0001838052],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004121696,0.0001992534,0.00035401233,0.0001572953,0.00006915428,0.000060916573,0.00025325496,0.0000586583,0.000028636852],"category_scores_gemma":[0.00018883779,0.0001397471,0.00008661753,0.00036304488,0.000030151496,0.00018413275,0.0000673259,0.00016686972,0.00020887058],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003501556,0.000033899883,0.0012256927,0.000022270327,0.00006200863,0.00003051316,0.0019236759,0.0015203872,0.9912505,3.9926894e-7,0.0034054003,0.000490219],"study_design_scores_gemma":[0.00056887796,0.00019411302,0.0008516206,0.00018611272,0.000028699153,0.0000409202,0.00041053043,0.0008325851,0.9948785,0.000034730696,0.0017197789,0.00025353621],"about_ca_topic_score_codex":0.000009275279,"about_ca_topic_score_gemma":0.0000050282615,"teacher_disagreement_score":0.0036279769,"about_ca_system_score_codex":0.00016114289,"about_ca_system_score_gemma":0.000008222266,"threshold_uncertainty_score":0.56987214},"labels":[],"label_agreement":null},{"id":"W4366439898","doi":"10.1016/j.micres.2023.127386","title":"Sustainable rhamnolipids production in the next decade – Advancing with Burkholderia thailandensis as a potent biocatalytic strain","year":2023,"lang":"en","type":"review","venue":"Microbiological Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Rhamnolipid; Biochemical engineering; Biology; Biotechnology; Biorefinery; Flux balance analysis; Industrial biotechnology; Industrial microbiology; Metabolic engineering; Environmentally friendly; Bioproducts; Synthetic biology; Burkholderia; Biofuel; Computational biology; Engineering; Bacteria; Food science; Ecology; Biochemistry; Fermentation","score_opus":0.16464781284437222,"score_gpt":0.39335992252519997,"score_spread":0.22871210968082775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4366439898","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.059920117,0.91712105,0.000008646848,0.0042314795,0.00043021757,0.014013549,0.00023190574,0.00031909012,0.0037239392],"genre_scores_gemma":[0.00516714,0.9862249,0.0000712966,0.000121686266,0.00014495678,0.00015961751,0.00031580127,0.000044221146,0.0077503677],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99524975,0.0012091525,0.0005405044,0.0010501805,0.0005710056,0.0013794072],"domain_scores_gemma":[0.9986207,0.00046975634,0.00014829548,0.0005688856,0.000053491443,0.00013886535],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.005243346,0.00039757582,0.00073294237,0.0002595194,0.00032646846,0.00021358265,0.0010399123,0.00045432537,0.0007372724],"category_scores_gemma":[0.001261604,0.00019392715,0.00016592052,0.0027413343,0.0006911503,0.00013756455,0.00067552814,0.001320534,0.0031909766],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027203994,0.0013809658,0.0004005248,0.009166423,0.00019390129,0.0015638042,0.0016599046,0.00007599152,0.061865482,0.00014399701,0.068121545,0.8551554],"study_design_scores_gemma":[0.00020435407,0.00044117987,0.00022153949,0.0015751662,0.00004248423,0.00019127414,0.0017975215,0.0000020157884,0.0002987089,0.00009126539,0.99469936,0.00043511402],"about_ca_topic_score_codex":0.0005523624,"about_ca_topic_score_gemma":0.00054108433,"teacher_disagreement_score":0.9265778,"about_ca_system_score_codex":0.0008195943,"about_ca_system_score_gemma":0.0002151796,"threshold_uncertainty_score":0.9975852},"labels":[],"label_agreement":null},{"id":"W4366490375","doi":"10.1016/j.heliyon.2023.e15639","title":"Tolerance, taxonomic and phylogenetic studies of some bacterial isolates involved in bioremediation of crude oil polluted soil in the southern region of Nigeria","year":2023,"lang":"en","type":"article","venue":"Heliyon","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Providence Health Care","keywords":"Bioremediation; Biology; Soil contamination; Benin city; Bacteria; Veterinary medicine; Soil water; Microbiology; Contamination; Ecology","score_opus":0.024709397768473067,"score_gpt":0.23122962284258058,"score_spread":0.20652022507410753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4366490375","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991818,0.0003734225,4.0693516e-7,0.00018434522,0.000097446515,0.00010870185,0.000030033418,0.0000053448166,0.00001847355],"genre_scores_gemma":[0.99725384,0.0026200057,0.000024581946,0.000036121288,0.000023874267,0.0000044483777,0.000008390435,0.0000046308737,0.00002409222],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99923843,0.000089464156,0.0003142242,0.00013704688,0.000102639504,0.00011817227],"domain_scores_gemma":[0.9996223,0.00005215245,0.00019299758,0.00010987981,0.000008718367,0.000013970413],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002770916,0.0000799408,0.0001902705,0.000087087654,0.00001473443,0.0000035958628,0.00010377001,0.000057791516,0.000023126684],"category_scores_gemma":[0.000047976235,0.000059170045,0.000023682494,0.00033128876,0.00017583782,0.000053295244,0.000057723133,0.000039247858,0.000013770858],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000061462546,0.000030618565,0.15941831,0.00008255081,0.000003923444,4.4983992e-7,0.0030015246,0.00006879981,0.83664125,0.0000016933159,0.00004821669,0.0006412185],"study_design_scores_gemma":[0.001161817,0.000108499335,0.7179291,0.00018898651,0.0000074774093,5.1561494e-7,0.0028611196,0.00014514543,0.277315,0.00006423145,0.000094665374,0.00012339848],"about_ca_topic_score_codex":0.000117558644,"about_ca_topic_score_gemma":0.0023016783,"teacher_disagreement_score":0.55932623,"about_ca_system_score_codex":0.000027826412,"about_ca_system_score_gemma":0.00000924453,"threshold_uncertainty_score":0.24128844},"labels":[],"label_agreement":null},{"id":"W4367056870","doi":"10.1099/acmi.0.000411","title":"The relationship between microbial community vitality and ATP bioburden in bottom waters under fuel microcosms","year":2023,"lang":"en","type":"article","venue":"Access Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"LuminUltra Technologies (Canada)","funders":"Battelle","keywords":"Microcosm; Adenylate kinase; Energy charge; Bioburden; Population; Nutrient; Aqueous solution; Aqueous two-phase system; Environmental chemistry; Biology; Chemistry; Environmental science; Pulp and paper industry; Microbiology; Ecology; Biochemistry; Engineering; Medicine","score_opus":0.06522955276961091,"score_gpt":0.30828373960195987,"score_spread":0.24305418683234897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4367056870","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953587,0.000031934447,0.000007741629,0.0037342827,0.00019120962,0.00030567235,0.00011236819,0.00006814935,0.00018991333],"genre_scores_gemma":[0.9985962,0.0000657524,0.000047966812,0.0006329618,0.000032680873,0.000006622344,0.00026208043,0.000014012048,0.00034173203],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998241,0.0005399395,0.00037910577,0.00031190773,0.000053541466,0.00047451272],"domain_scores_gemma":[0.9986576,0.0008055623,0.00011961307,0.00033349192,0.000009394154,0.000074365526],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010485894,0.00018457184,0.00020023416,0.00007652889,0.00048620361,0.00010996672,0.00069349323,0.00022909937,0.00010091281],"category_scores_gemma":[0.000117960815,0.000134292,0.000046848774,0.0005319083,0.0007248905,0.00019989951,0.00091971154,0.00048730854,0.000670705],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015872265,0.000015565938,0.69358754,0.000006907959,0.0000073144965,0.0000011900802,0.00042541456,0.0000038987664,0.30230463,0.000018613935,0.0032352197,0.0003778085],"study_design_scores_gemma":[0.00045691294,0.000023096047,0.9799593,0.000008756056,0.0000080296895,0.000007645523,0.000211131,0.0000017174924,0.00834008,0.0010354539,0.009759228,0.00018861523],"about_ca_topic_score_codex":0.0014779755,"about_ca_topic_score_gemma":0.002700242,"teacher_disagreement_score":0.29396453,"about_ca_system_score_codex":0.00013466086,"about_ca_system_score_gemma":0.000016527616,"threshold_uncertainty_score":0.86207795},"labels":[],"label_agreement":null},{"id":"W4367172973","doi":"10.1016/j.ibiod.2023.105603","title":"Microbial responses to increased salinity in oiled upper tidal shorelines","year":2023,"lang":"en","type":"article","venue":"International Biodeterioration & Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Fisheries and Oceans Canada; McGill University; National Research Council Canada","funders":"","keywords":"Salinity; Biodegradation; Environmental chemistry; Seawater; Nutrient; Intertidal zone; Hydrocarbon; Microorganism; Halophile; Environmental science; Chemistry; Ecology; Geology; Biology; Bacteria","score_opus":0.021125792412467974,"score_gpt":0.27671280601068415,"score_spread":0.2555870135982162,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4367172973","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99266917,0.0000024800834,0.0002468597,0.004848947,0.0008006723,0.00035365284,0.00027297338,0.00015905418,0.0006461922],"genre_scores_gemma":[0.9946645,0.000027269733,0.0016065505,0.0010487235,0.00014199776,0.00002735261,0.0012117481,0.000015780372,0.0012560781],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99813646,0.00013705024,0.00053928274,0.00046414585,0.00045997408,0.00026307767],"domain_scores_gemma":[0.9994207,0.00007051186,0.0001355387,0.0001965848,0.00006178918,0.00011484764],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000604434,0.00019556616,0.00015296665,0.0004047837,0.000092255534,0.00013851743,0.0003201586,0.00013057936,0.0021123483],"category_scores_gemma":[0.00037864724,0.00018784661,0.00006675026,0.0009401351,0.0000700065,0.00043252393,0.0001681736,0.00010512744,0.0056735054],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032193732,0.0000708497,0.109133385,0.0000023467599,0.000006453022,0.0000050471544,0.00026873636,0.00010869603,0.8733869,0.00002038639,0.010254828,0.0064204293],"study_design_scores_gemma":[0.0013680153,0.00013574019,0.7578248,0.000044806184,0.000009751551,0.000008480505,0.00014748637,0.0070209117,0.15114918,0.00010764164,0.081603825,0.0005793998],"about_ca_topic_score_codex":0.00082813285,"about_ca_topic_score_gemma":0.0016475727,"teacher_disagreement_score":0.7222377,"about_ca_system_score_codex":0.00029578336,"about_ca_system_score_gemma":0.00003665107,"threshold_uncertainty_score":0.99879986},"labels":[],"label_agreement":null},{"id":"W4376254943","doi":"10.1186/s40168-023-01537-7","title":"Genomic insights into cryptic cycles of microbial hydrocarbon production and degradation in contiguous freshwater and marine microbiomes","year":2023,"lang":"en","type":"article","venue":"Microbiome","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université Laval; Center for Northern Studies","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds Québécois de la Recherche sur la Nature et les Technologies; Parks Canada; Compute Canada; Canada First Research Excellence Fund; ArcticNet; Université Laval","keywords":"Biology; Metagenomics; Water column; Anoxic waters; Deltaproteobacteria; Phototroph; Ecology; Microbial ecology; Microbial mat; Proteobacteria; Cyanobacteria; Gammaproteobacteria; Botany; Bacteria; Gene","score_opus":0.006739898790560005,"score_gpt":0.19619078125269174,"score_spread":0.18945088246213174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4376254943","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99891853,0.00009191323,0.0000022144543,0.0003761418,0.00017250812,0.00032304184,0.000019496701,0.0000425173,0.000053619202],"genre_scores_gemma":[0.9982359,0.0002990492,0.00081210426,0.0000662377,0.000023212919,0.0000035571566,0.00013133166,0.000016498978,0.00041211172],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99886715,0.00005404918,0.00034543852,0.00042160886,0.00007608469,0.0002356577],"domain_scores_gemma":[0.9996554,0.000015416537,0.00011213891,0.00015127378,0.000009715822,0.000056032986],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001938364,0.00017554527,0.00021665868,0.00027603234,0.00006615803,0.000030641302,0.00010681992,0.00010719631,0.00017462338],"category_scores_gemma":[0.000021527601,0.0001583881,0.000027053964,0.00050938345,0.00031569923,0.00015820804,0.0002850468,0.000077073826,0.00014879102],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031393025,0.00004054204,0.053816322,0.00004014538,0.000008138246,0.000003880256,0.0008988137,0.000008190946,0.94170755,0.000002335796,0.00099727,0.0024454035],"study_design_scores_gemma":[0.00060225686,0.000050228853,0.27370396,0.000038330385,0.000012955504,0.00001918907,0.00007423674,0.00010699165,0.7219126,0.00016783344,0.003068055,0.0002433655],"about_ca_topic_score_codex":0.0010321997,"about_ca_topic_score_gemma":0.0045565753,"teacher_disagreement_score":0.21988763,"about_ca_system_score_codex":0.00010123761,"about_ca_system_score_gemma":0.000009350685,"threshold_uncertainty_score":0.6458879},"labels":[],"label_agreement":null},{"id":"W4376472086","doi":"10.1007/978-981-99-1179-0_8","title":"Fungal Bioremediation of Soils Contaminated by Petroleum Hydrocarbons","year":2023,"lang":"en","type":"book-chapter","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Bioremediation; Environmental remediation; Bioaugmentation; Environmental chemistry; Environmental science; Soil contamination; Pollutant; Biodegradation; Contamination; Petroleum; Soil water; Waste management; Environmental engineering; Chemistry; Soil science; Ecology; Biology; Engineering","score_opus":0.010025774391556564,"score_gpt":0.19336951194334429,"score_spread":0.18334373755178773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4376472086","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.016538018,0.000028151191,0.000035683246,0.0002775284,0.0005037674,0.0003368736,0.00049326447,0.00018001437,0.9816067],"genre_scores_gemma":[0.28089124,0.00020433802,0.000033475324,0.00015912036,0.000039351948,0.000001953185,0.0004041057,0.000042900938,0.7182235],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984348,0.000015231086,0.0004499765,0.00038185727,0.00048683304,0.00023131295],"domain_scores_gemma":[0.9992514,0.000048302623,0.00032533883,0.00024803748,0.0000103552475,0.00011652294],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00018839775,0.00027207145,0.00031468424,0.00007841153,0.000039195835,0.000013273212,0.00022995262,0.0003772843,0.009593516],"category_scores_gemma":[0.00002412314,0.00023994077,0.00012330269,0.00006399489,0.00020449613,0.0000654081,0.00013413148,0.00018751119,0.0048757684],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004192041,0.0000796997,0.0020654972,0.000035234618,0.000115095296,0.000017306202,0.0001502283,0.000010120819,0.6212202,0.0027901994,0.3685285,0.0049460167],"study_design_scores_gemma":[0.0039611207,0.0010862477,0.013084255,0.0003441746,0.0005175217,0.00001830849,0.0001422872,0.0024132372,0.3541915,0.0052616633,0.61480105,0.0041786046],"about_ca_topic_score_codex":0.00015426113,"about_ca_topic_score_gemma":0.0003757082,"teacher_disagreement_score":0.2670287,"about_ca_system_score_codex":0.0001368112,"about_ca_system_score_gemma":0.000020512643,"threshold_uncertainty_score":0.995899},"labels":[],"label_agreement":null},{"id":"W4376504559","doi":"10.1007/s11356-023-27233-5","title":"Formulation of synthetic bacteria consortia for enzymatic biodegradation of polyaromatic hydrocarbons contaminated soil: soil column study","year":2023,"lang":"en","type":"article","venue":"Environmental Science and Pollution Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; York University","funders":"","keywords":"Dioxygenase; Pyrene; Chemistry; Biodegradation; Bioremediation; Enzyme; Biotransformation; Soil contamination; Protocatechuic acid; Environmental chemistry; Stenotrophomonas; Rhodococcus; Chromatography; Bacteria; Biochemistry; Contamination; Organic chemistry; Biology; Antioxidant","score_opus":0.03411248419296417,"score_gpt":0.30539633698060875,"score_spread":0.27128385278764455,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4376504559","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99838525,0.000008439937,0.000029403176,0.0002168817,0.00005641929,0.0010528988,0.00007665921,0.000016832702,0.00015721061],"genre_scores_gemma":[0.9996121,0.00003108715,0.00006449448,0.000015794953,0.00000625764,0.000026796195,0.000026890673,0.0000069771595,0.00020959668],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9978151,0.00014089521,0.0003878404,0.0003261814,0.0009681488,0.0003618457],"domain_scores_gemma":[0.99939543,0.00011491526,0.00015784276,0.0002032826,0.000014198097,0.000114346025],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027502144,0.000102167345,0.00016700954,0.00024615185,0.0003443475,0.000030382025,0.00022628516,0.000053999265,0.00031311836],"category_scores_gemma":[0.00021613375,0.00009095361,0.000031743806,0.001047849,0.0012627079,0.00028290154,0.0001960501,0.00007030567,0.00008913665],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034553283,0.00023938081,0.028391844,0.000014525267,0.000005806338,3.4725602e-7,0.0008876969,0.000031822914,0.96777916,0.00002836137,0.00014838773,0.0024381033],"study_design_scores_gemma":[0.0007323137,0.0006561976,0.66574365,0.00002311327,0.0000151619715,0.0000018071767,0.002428683,0.012855216,0.31714657,0.0001821795,0.000088185996,0.00012690428],"about_ca_topic_score_codex":0.0003278422,"about_ca_topic_score_gemma":0.00015038994,"teacher_disagreement_score":0.6506326,"about_ca_system_score_codex":0.00021051886,"about_ca_system_score_gemma":0.000046483507,"threshold_uncertainty_score":0.46525},"labels":[],"label_agreement":null},{"id":"W4377725417","doi":"10.2139/ssrn.4456904","title":"Aerobic Biodegradation of Cycloalkanes in Non-Aqueous Extracted Oil Sands Tailings","year":2023,"lang":"en","type":"preprint","venue":"SSRN Electronic Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biodegradation; Chemistry; Tailings; Cyclohexane; Environmental chemistry; Organic chemistry","score_opus":0.009589429503062961,"score_gpt":0.2303978778671779,"score_spread":0.22080844836411495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377725417","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99793714,0.0003196194,0.00019249968,0.0005092847,0.00048856216,0.00012878382,0.000014405773,0.000037091377,0.0003726016],"genre_scores_gemma":[0.9863365,0.010911311,0.00015386425,0.000039404775,0.00010230235,0.000004220071,0.000083518964,0.000031272495,0.0023375752],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99696565,0.000096888674,0.0007131267,0.00040732478,0.00044783117,0.0013691924],"domain_scores_gemma":[0.9989614,0.000048014157,0.0006274419,0.00024930944,0.000029506025,0.00008432459],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.001667282,0.00026628128,0.00035777074,0.00021390677,0.000073086994,0.00004786436,0.0005175255,0.00035843317,0.00029038507],"category_scores_gemma":[0.000112547146,0.0002502016,0.0001590332,0.00040529566,0.00010712016,0.00012931344,0.0002832079,0.0024844883,0.00023290356],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022241194,0.000411187,0.049496718,0.00010823464,0.00016093269,0.00003315797,0.0009069181,0.002650285,0.7893478,0.0001470389,0.00090164354,0.15561365],"study_design_scores_gemma":[0.01573743,0.0026047581,0.5253443,0.0033783983,0.0007994365,0.001667547,0.0068833902,0.014571028,0.2318389,0.17804575,0.010401394,0.0087276725],"about_ca_topic_score_codex":0.0016031303,"about_ca_topic_score_gemma":0.0110507235,"teacher_disagreement_score":0.55750895,"about_ca_system_score_codex":0.0015199325,"about_ca_system_score_gemma":0.0006238641,"threshold_uncertainty_score":0.999995},"labels":[],"label_agreement":null},{"id":"W4382248107","doi":"10.1002/cjce.25029","title":"Free fatty acids in sunflower oil soap stock progressed the sophorolipid production by <i>Candida catenulata</i>","year":2023,"lang":"en","type":"article","venue":"The Canadian Journal of Chemical Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Chemistry; Urea; Food science; Sunflower oil; Nitrogen; Yeast; Yeast extract; Biochemistry; Organic chemistry; Fermentation","score_opus":0.006612885102046705,"score_gpt":0.1802685505464788,"score_spread":0.1736556654444321,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382248107","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935241,0.00007109054,0.0000041596095,0.005866758,0.0003697929,0.00006493413,0.000016675902,0.000012137984,0.00007037699],"genre_scores_gemma":[0.99955213,0.000008935928,0.000031039144,0.0001416431,0.00014144962,0.000002487288,0.000004727588,0.000011944669,0.00010561436],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991345,0.000017537544,0.00022921876,0.00010252732,0.00021347418,0.00030278027],"domain_scores_gemma":[0.9995196,0.000026618422,0.000071450064,0.00017498122,0.000013560511,0.00019382493],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044685378,0.000100129306,0.00010612912,0.000044036617,0.00006503872,0.000039551367,0.00043646313,0.00005998528,0.00013154362],"category_scores_gemma":[0.00020345405,0.00006142237,0.00004435505,0.00042786653,0.000102653845,0.00009105296,0.000038101996,0.00031273323,0.000034310688],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011156214,0.000007208281,0.0069394642,0.000006817554,0.000009905711,0.000012799874,0.00043379262,0.0033945935,0.9611165,0.0000025641086,0.02705136,0.0010138397],"study_design_scores_gemma":[0.0010468231,0.00004811274,0.017725745,0.00011513139,0.000033213346,0.00014032862,0.00006465673,0.0047615687,0.93424743,0.00009239198,0.041254196,0.0004703955],"about_ca_topic_score_codex":0.0012691952,"about_ca_topic_score_gemma":0.0019768304,"teacher_disagreement_score":0.026869062,"about_ca_system_score_codex":0.00026485193,"about_ca_system_score_gemma":0.000069061796,"threshold_uncertainty_score":0.25047314},"labels":[],"label_agreement":null},{"id":"W4382935010","doi":"10.1111/gwmr.12596","title":"Strategies for Bioremediation of Soil from an Industrial Site Exposed to Chlorinated and Nitroaromatic Compounds","year":2023,"lang":"en","type":"article","venue":"Groundwater Monitoring & Remediation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Fundação de Amparo à Ciência e Tecnologia do Estado de Pernambuco; Mitacs; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Corteva Agriscience","keywords":"Bioremediation; Biostimulation; Bioaugmentation; Environmental chemistry; Biodegradation; Environmental remediation; Groundwater; Environmental science; Soil water; Chemistry; Aeration; Pulp and paper industry; Environmental engineering; Contamination; Soil science; Biology; Ecology; Organic chemistry","score_opus":0.04227585173435125,"score_gpt":0.26199393940588706,"score_spread":0.2197180876715358,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382935010","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99752516,0.0000036999925,0.00039918907,0.00019962783,0.0011354412,0.0005201354,0.000056642126,0.00013163788,0.000028486103],"genre_scores_gemma":[0.99800384,0.00001492997,0.0007808739,0.00002582428,0.0005689357,0.000037047153,0.0005015624,0.000020842592,0.000046124223],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99852914,0.00006216877,0.0004054758,0.00035129706,0.00037076446,0.00028112833],"domain_scores_gemma":[0.99935216,0.00009975014,0.00017752366,0.00018915764,0.00003908045,0.00014234049],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041110374,0.0001724215,0.00020755346,0.00014149479,0.000120386,0.000118403135,0.00014384148,0.00014652101,0.000040404335],"category_scores_gemma":[0.00007176954,0.00016202668,0.000036108882,0.0004517416,0.000059115515,0.00062370405,0.0000831216,0.0000781003,0.0001059177],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010602763,0.0000422237,0.12734583,0.000011960148,0.000011215059,5.542117e-7,0.0026694753,0.00023216505,0.86585,0.0000052531755,0.00034877125,0.0033765375],"study_design_scores_gemma":[0.0015239745,0.0004845714,0.42196137,0.000038919,0.000037106332,4.007229e-7,0.0012363481,0.0023302832,0.570874,0.0005627722,0.000627556,0.00032272804],"about_ca_topic_score_codex":0.0008208622,"about_ca_topic_score_gemma":0.00023477366,"teacher_disagreement_score":0.294976,"about_ca_system_score_codex":0.00013677508,"about_ca_system_score_gemma":0.000021431495,"threshold_uncertainty_score":0.66072565},"labels":[],"label_agreement":null},{"id":"W4384156447","doi":"10.1016/j.colsuc.2023.100013","title":"Effect of bacterial surfactants on the phase behavior of miscible pollutants in water","year":2023,"lang":"en","type":"article","venue":"Colloids and Surfaces C Environmental Aspects","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Light Source (Canada); Lakehead University; University of Guelph","funders":"Government of Saskatchewan; Natural Sciences and Engineering Research Council of Canada; National Research Council; Canadian Institutes of Health Research; Canada Foundation for Innovation; University of Saskatchewan","keywords":"Rhamnolipid; Chemistry; Toluene; Solvent; Phase (matter); Tetrahydrofuran; Small-angle X-ray scattering; Micelle; Fourier transform infrared spectroscopy; Amphiphile; Infrared spectroscopy; Chemical engineering; Organic chemistry; Bacteria; Scattering; Aqueous solution","score_opus":0.0071134820393675665,"score_gpt":0.22756420062227134,"score_spread":0.22045071858290377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384156447","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99817395,0.000017313541,6.5329665e-8,0.00009324644,0.00014794065,0.000544797,0.00022616032,0.000013864733,0.0007826496],"genre_scores_gemma":[0.9995028,0.00012175982,0.0000068811373,0.000023005223,0.000008555596,0.000007943656,0.000025782709,0.000014213389,0.00028905185],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985497,0.0001536875,0.00032278703,0.00029853405,0.00033734477,0.0003379485],"domain_scores_gemma":[0.99949324,0.00012873205,0.000092277754,0.00020328489,0.0000010577338,0.00008139499],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00063319755,0.000195102,0.00028425053,0.000056013374,0.00008533267,0.000014450709,0.00018444544,0.000082467224,0.0032930854],"category_scores_gemma":[0.000019909785,0.000112568676,0.000059744973,0.00022088319,0.0003577793,0.00008809643,0.00019664626,0.00009289475,0.00021761171],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023730687,0.00018789517,0.07831115,0.000010477564,0.0000074535265,0.000011392053,0.000307034,0.00004252804,0.9188239,0.0000032531339,0.00011381697,0.001943785],"study_design_scores_gemma":[0.0015659876,0.00076975435,0.15813173,0.000016966904,0.000014532322,0.0000017421822,0.000105825915,0.000109653294,0.83889455,0.00001172654,0.00024490012,0.00013263256],"about_ca_topic_score_codex":0.000056602126,"about_ca_topic_score_gemma":0.000060479168,"teacher_disagreement_score":0.07992936,"about_ca_system_score_codex":0.00007492085,"about_ca_system_score_gemma":0.0000045739816,"threshold_uncertainty_score":0.997618},"labels":[],"label_agreement":null},{"id":"W4385010539","doi":"10.2139/ssrn.4517051","title":"Phytotoxicity of Weathered Petroleum Hydrocarbons in Soil on Boreal Plant Species","year":2023,"lang":"en","type":"preprint","venue":"SSRN Electronic Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Military College of Canada; Queen's University","funders":"","keywords":"Phytotoxicity; Boreal; Petroleum; Environmental science; Taiga; Environmental chemistry; Forestry; Agronomy; Chemistry; Geography; Biology; Archaeology; Organic chemistry","score_opus":0.015180678272901468,"score_gpt":0.22018163644014693,"score_spread":0.20500095816724545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385010539","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938512,0.00012695648,0.000071533796,0.00049985846,0.00037446717,0.00018179997,0.00010055474,0.00003212997,0.004761516],"genre_scores_gemma":[0.9925995,0.0053096153,0.000017822977,0.000055024335,0.00015190571,0.0000035634546,0.000041889423,0.00002807529,0.0017926198],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9969514,0.00012936891,0.00051670405,0.0003816431,0.0005334338,0.0014874544],"domain_scores_gemma":[0.99918103,0.000043571774,0.00041778167,0.00026335666,0.0000044017042,0.0000898806],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0013167947,0.0002773922,0.0003767919,0.00015756038,0.000062151,0.000030270176,0.0005376139,0.00024336664,0.0001642368],"category_scores_gemma":[0.000051768013,0.00023638672,0.00019047923,0.00018051345,0.00012327466,0.00004773627,0.00029766187,0.0027801066,0.0001804889],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020333664,0.0028942851,0.4148412,0.00015919597,0.0009247539,0.00030213819,0.0028235838,0.016798047,0.5244655,0.008983207,0.011266314,0.0145083815],"study_design_scores_gemma":[0.005079077,0.0021469384,0.6977005,0.0008970383,0.00016288411,0.0003361729,0.002092227,0.0065947636,0.10365186,0.17547716,0.0032460822,0.0026153196],"about_ca_topic_score_codex":0.0011979862,"about_ca_topic_score_gemma":0.033473827,"teacher_disagreement_score":0.42081365,"about_ca_system_score_codex":0.001929586,"about_ca_system_score_gemma":0.0005563285,"threshold_uncertainty_score":0.99952054},"labels":[],"label_agreement":null},{"id":"W4385074123","doi":"10.1111/gwmr.12607","title":"Evaluation of Strategies to Remediate Mixed Wastes at an Industrial Site in Brazil","year":2023,"lang":"en","type":"article","venue":"Groundwater Monitoring & Remediation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Toronto; Corteva Agriscience","keywords":"Biodegradation; Environmental remediation; Chlorobenzene; Environmental chemistry; Anaerobic exercise; Microcosm; Reductive dechlorination; Chemistry; Zerovalent iron; Contamination; Waste management; Environmental science; Organic chemistry; Ecology; Biology; Catalysis","score_opus":0.06732323930851769,"score_gpt":0.30633307120563186,"score_spread":0.23900983189711417,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385074123","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997445,0.000006138954,0.000015174447,0.00017672258,0.0016042896,0.0004848473,0.000010350865,0.000080023674,0.00017747148],"genre_scores_gemma":[0.9990989,0.000020120764,0.00014996808,0.000014510142,0.0004040939,0.00002931842,0.00014418311,0.000017850722,0.000121046105],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99724334,0.00029322447,0.0004676726,0.00038303764,0.0012657169,0.0003470011],"domain_scores_gemma":[0.9993372,0.00005048322,0.00016359724,0.00024816577,0.00007341584,0.00012714401],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0026888133,0.00016461377,0.00017555461,0.00021912635,0.00008102696,0.00006434308,0.0001867985,0.00015526406,0.00028463255],"category_scores_gemma":[0.00022005316,0.00015584093,0.000036739646,0.0008823276,0.00004825843,0.0006914517,0.00015856087,0.00011101063,0.0008540005],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041029285,0.000042989264,0.33549163,0.0000045165793,0.0000050165854,0.0000012747437,0.002285815,0.00354193,0.64364076,0.0000013390007,0.00036703312,0.014576708],"study_design_scores_gemma":[0.00087812654,0.00011789678,0.73089063,0.00002565058,0.000023534494,4.5697928e-7,0.0004671901,0.0011900592,0.2657043,0.00010176658,0.00041564775,0.0001847349],"about_ca_topic_score_codex":0.00065817055,"about_ca_topic_score_gemma":0.0020362588,"teacher_disagreement_score":0.395399,"about_ca_system_score_codex":0.0007117245,"about_ca_system_score_gemma":0.000047172747,"threshold_uncertainty_score":0.99992394},"labels":[],"label_agreement":null},{"id":"W4385254430","doi":"10.1016/j.jbc.2023.105086","title":"Efficient NADPH-dependent dehalogenation afforded by a self-sufficient reductive dehalogenase","year":2023,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; University of Toronto","keywords":"Dehalogenase; Halogenation; Chemistry; Reductive dechlorination; Biochemistry; Combinatorial chemistry; Stereochemistry; Organic chemistry; Biodegradation","score_opus":0.012406332040320945,"score_gpt":0.2256346993136492,"score_spread":0.21322836727332828,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385254430","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99815696,0.0000531658,0.000044686876,0.00033992925,0.00016126086,0.000095708805,0.000041088217,0.000049745835,0.0010574228],"genre_scores_gemma":[0.9992375,0.000083367944,0.00026827416,0.00010723927,0.000080929356,0.0000017354216,0.000025806201,0.000006255166,0.00018894437],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985864,0.00005379447,0.00043546778,0.00023851923,0.00039839034,0.00028741697],"domain_scores_gemma":[0.99924463,0.000056284192,0.000348419,0.00011225578,0.000044202756,0.00019423613],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00060803245,0.00014892698,0.00019195942,0.000025155476,0.00008564844,0.000021667185,0.00027525818,0.00017749469,0.0014190981],"category_scores_gemma":[0.00019943717,0.000100725425,0.00012489277,0.0003572772,0.00012309075,0.0000275097,0.00013149176,0.00020822062,0.00029281186],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051428702,0.00026711004,0.0027648588,0.0000047902417,0.00001627688,0.000033072,0.0001287558,0.00054657087,0.98831946,9.737598e-7,0.0074802195,0.0003864914],"study_design_scores_gemma":[0.0006239011,0.00016621604,0.0075129815,0.000011168179,0.000017341385,0.00013300907,0.00035270685,0.00062970223,0.98622364,0.000036893747,0.004077633,0.00021479247],"about_ca_topic_score_codex":0.0000035889127,"about_ca_topic_score_gemma":5.672467e-7,"teacher_disagreement_score":0.0047481228,"about_ca_system_score_codex":0.000311594,"about_ca_system_score_gemma":0.000025788771,"threshold_uncertainty_score":0.9994937},"labels":[],"label_agreement":null},{"id":"W4385634406","doi":"10.1016/j.envpol.2023.122303","title":"Novel BTEX-degrading strains from subsurface soil: Isolation, identification and growth evaluation","year":2023,"lang":"en","type":"article","venue":"Environmental Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; York University","funders":"Natural Sciences and Engineering Research Council of Canada; York University","keywords":"BTEX; Isolation (microbiology); Identification (biology); Environmental science; Bioremediation; Environmental chemistry; Soil contamination; Contamination; Soil water; Chemistry; Biology; Microbiology; Soil science; Ethylbenzene; Ecology","score_opus":0.018525777658078533,"score_gpt":0.22846906941451323,"score_spread":0.2099432917564347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385634406","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962961,0.000031207535,0.0016268385,0.0006898985,0.00023664132,0.00036780874,0.00024765742,0.00009481095,0.00040905603],"genre_scores_gemma":[0.9983165,0.00011844073,0.00030396497,0.00013923142,0.000057591733,0.000009462547,0.0006835751,0.000016907137,0.0003543079],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998464,0.00007195653,0.00028651487,0.0004366338,0.0005095358,0.0002313786],"domain_scores_gemma":[0.99956346,0.000019582134,0.00014823726,0.00016719957,0.000003281713,0.000098230055],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0005352522,0.00015735024,0.000098970886,0.00005981444,0.00024144733,0.00005511481,0.000105205494,0.00010409261,0.0016334791],"category_scores_gemma":[0.00004325219,0.00016404681,0.00003817797,0.00025687262,0.00016093571,0.00045277143,0.00010000013,0.000087714565,0.0019377484],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006812801,0.000044529846,0.041985538,0.0000014688509,0.0000075974995,3.0787183e-7,0.00037044598,0.00047151445,0.95066345,0.0000190671,0.00088052684,0.005548742],"study_design_scores_gemma":[0.0005066238,0.00001779319,0.9316271,0.000005189543,0.00002723601,0.0000019501617,0.00021666705,0.02077473,0.045970414,0.00045927,0.00020617152,0.00018687635],"about_ca_topic_score_codex":0.00032861507,"about_ca_topic_score_gemma":0.00011551764,"teacher_disagreement_score":0.904693,"about_ca_system_score_codex":0.0003840709,"about_ca_system_score_gemma":0.0000067386213,"threshold_uncertainty_score":0.99927914},"labels":[],"label_agreement":null},{"id":"W4386056744","doi":"10.1016/j.scitotenv.2023.166428","title":"Optimization and purification of bioproducts from Bacillus velezensis PhCL fermentation and their potential on industrial application and bioremediation","year":2023,"lang":"en","type":"article","venue":"The Science of The Total Environment","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakehead University","funders":"Natural Sciences and Engineering Research Council of Canada; Lakehead University","keywords":"Bioremediation; Chemistry; Bioproducts; Fermentation; Bioproduction; Downstream processing; Chromatography; Ammonium sulfate precipitation; Bioconversion; Organic chemistry; Bacteria; Biochemistry; Enzyme; Biofuel; Biotechnology; Biology","score_opus":0.012347093893236745,"score_gpt":0.18865553360610632,"score_spread":0.17630843971286958,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386056744","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976917,0.000014265835,0.00010439798,0.0016113613,0.00009911851,0.0004048539,0.000036951235,0.000008530043,0.00002883269],"genre_scores_gemma":[0.99952304,0.0001863848,0.00018337605,0.00001841249,0.000025165242,0.0000052819537,0.000016738342,0.0000043394675,0.000037285376],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990248,0.000050863837,0.00019207955,0.00028540308,0.0003346281,0.000112207235],"domain_scores_gemma":[0.9994699,0.000025253543,0.00021428172,0.00023584609,0.000006398854,0.000048334827],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005198797,0.00009140683,0.00008369007,0.000042839005,0.00019650334,0.000024151313,0.0001509036,0.00004354623,0.00005181566],"category_scores_gemma":[0.000052736534,0.000054272645,0.000015543046,0.00032895358,0.0010207783,0.00014278125,0.00021312729,0.000052437084,0.000012880226],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019893581,0.000022165163,0.00037343652,0.0000018450874,0.00000346872,1.6181609e-8,0.0005358986,0.02147064,0.96782553,0.000018733672,0.000023327584,0.009705045],"study_design_scores_gemma":[0.00044733408,0.000083296334,0.3037236,0.000010622017,0.000023837014,0.0000016122988,0.00040825843,0.058820195,0.6360891,0.00025896318,0.000022066868,0.00011109249],"about_ca_topic_score_codex":0.000107133426,"about_ca_topic_score_gemma":0.0000010035523,"teacher_disagreement_score":0.33173642,"about_ca_system_score_codex":0.00005934062,"about_ca_system_score_gemma":0.000010127371,"threshold_uncertainty_score":0.37611002},"labels":[],"label_agreement":null},{"id":"W4386127603","doi":"10.11159/icepr23.114","title":"Coupling Leaching-Bioremediation for Petroleum-Contaminated Soil","year":2023,"lang":"en","type":"article","venue":"Proceedings of the World Congress on New Technologies","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Natural Science Foundation of China","keywords":"Bioremediation; Leaching (pedology); Petroleum; Soil contamination; Environmental science; Contamination; Waste management; Environmental chemistry; Mining engineering; Geology; Soil water; Chemistry; Soil science; Engineering","score_opus":0.014067381108257506,"score_gpt":0.23540113932628393,"score_spread":0.22133375821802642,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386127603","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98986006,0.00001357333,0.0000040473196,0.0069845584,0.0005091269,0.0004252597,0.000012632928,0.0008152424,0.0013755288],"genre_scores_gemma":[0.9903672,0.00004169617,0.00023859004,0.00006974615,0.000024633233,0.000021634556,0.0000040641635,0.000015974156,0.009216482],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988778,0.0000018057773,0.00025236057,0.00029442203,0.000282944,0.00029065728],"domain_scores_gemma":[0.9994344,0.00007629676,0.00029504485,0.00013934849,0.000025862642,0.00002901549],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029037506,0.00015821069,0.00017291443,0.0001723432,0.00016100371,0.000043152308,0.0007168846,0.00010428853,0.000034716108],"category_scores_gemma":[0.00048415476,0.000110704,0.000086858396,0.0008652476,0.00022200502,0.00014557206,0.00032135987,0.00017411982,0.0000817268],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000099617515,0.000045871304,0.062495466,0.000039092076,0.000023414064,2.8475986e-7,0.00009280541,0.00050080166,0.7988714,0.0014400018,0.121253625,0.01513763],"study_design_scores_gemma":[0.00060667057,0.00007906935,0.010393811,0.00009260824,0.000019454312,5.965552e-7,0.0004209926,0.0058401152,0.96293604,0.001626767,0.01778088,0.00020301617],"about_ca_topic_score_codex":0.00002326559,"about_ca_topic_score_gemma":0.00013801467,"teacher_disagreement_score":0.16406463,"about_ca_system_score_codex":0.00009798691,"about_ca_system_score_gemma":0.000010574696,"threshold_uncertainty_score":0.4514378},"labels":[],"label_agreement":null},{"id":"W4386812868","doi":"10.1016/j.envres.2023.117136","title":"Phytotoxicity of weathered petroleum hydrocarbons in soil to boreal plant species","year":2023,"lang":"en","type":"article","venue":"Environmental Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Military College of Canada; EcoMetrix; Queen's University","funders":"Environment Canada; Natural Sciences and Engineering Research Council of Canada; Providence Health Care","keywords":"Shoot; Contamination; Soil contamination; Taiga; Phytotoxicity; Environmental chemistry; Dry weight; Chemistry; Horticulture; Botany; Biology; Ecology","score_opus":0.03764814677307962,"score_gpt":0.2836321315302955,"score_spread":0.24598398475721586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386812868","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9866064,0.0000102064405,0.0000023929747,0.0003169155,0.00004005322,0.00026821528,0.00013744214,0.000020387386,0.012597943],"genre_scores_gemma":[0.99680483,0.0001469573,0.000038082522,0.000050656086,0.000026320122,0.000015120956,0.00005069893,0.000013936179,0.0028533735],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9978837,0.00014025946,0.00023800801,0.00034472582,0.0008812489,0.00051205955],"domain_scores_gemma":[0.99945474,0.000091677925,0.00003233692,0.00024894037,6.402422e-7,0.00017164],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0008414381,0.00011495122,0.00015049688,0.00017983756,0.000074840515,0.000013852233,0.00032873504,0.00006947665,0.0017954329],"category_scores_gemma":[0.00005493292,0.000105267965,0.000045751487,0.00058531284,0.00032156927,0.00007072019,0.0004963155,0.00022214015,0.0041198726],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055756034,0.00015648532,0.189176,0.0000032104183,0.000003142335,0.000028153096,0.0003778006,0.0000983379,0.8058975,0.000008024649,0.0027820033,0.0014136013],"study_design_scores_gemma":[0.00027513385,0.000119075106,0.7584191,0.000010352241,8.644966e-7,0.0000014695412,0.00035495017,0.0006098878,0.23623057,0.00009965257,0.0037683577,0.000110629175],"about_ca_topic_score_codex":0.0005847282,"about_ca_topic_score_gemma":0.0013704674,"teacher_disagreement_score":0.5696669,"about_ca_system_score_codex":0.00035712062,"about_ca_system_score_gemma":0.000010940762,"threshold_uncertainty_score":0.9991171},"labels":[],"label_agreement":null},{"id":"W4387116846","doi":"10.1016/j.jhazmat.2023.132653","title":"Oleic-acid functionalized mesoporous silica nanoparticles with a hydroxyapatite core enhanced growth of the hydrocarbon degrader Dietzia maris at oil–water interfaces","year":2023,"lang":"en","type":"article","venue":"Journal of Hazardous Materials","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Hydro-Québec","keywords":"Hydrocarbon; Hexadecane; Chemistry; Biodegradation; Microcosm; Bioremediation; Mesoporous silica; Bacteria; Chemical engineering; Oleic acid; Mesoporous material; Organic chemistry; Environmental chemistry; Biochemistry; Geology; Catalysis","score_opus":0.010515672534483102,"score_gpt":0.20438111206765383,"score_spread":0.19386543953317073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387116846","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99808544,0.000028790735,0.0000034876675,0.0007805649,0.0006168817,0.00011507135,0.000031093135,0.000024149318,0.00031452667],"genre_scores_gemma":[0.9985405,0.00008218045,0.000117550226,0.00015220427,0.00006447561,0.000004090014,0.000006663058,0.000020215999,0.0010121133],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99816424,0.00013052525,0.0006598921,0.00018739532,0.00057277357,0.00028514818],"domain_scores_gemma":[0.9990668,0.000034944624,0.0005732449,0.00019071312,0.000048438145,0.000085808955],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000514622,0.00018870209,0.00038283618,0.00005323819,0.00011520612,0.00004381938,0.000309363,0.000077609366,0.0038015558],"category_scores_gemma":[0.000055124296,0.00009374352,0.00009576078,0.00022352042,0.0002354973,0.0001524583,0.00022629787,0.00008003874,0.00023824237],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005766929,0.000054244174,0.005182982,0.000025140953,0.000054212163,0.000010901066,0.0005727991,0.000054280452,0.9916617,0.000002621857,0.0015957725,0.00020860799],"study_design_scores_gemma":[0.00077031524,0.0002219758,0.018932486,0.00006418587,0.000053032214,0.000049218328,0.000062710176,0.000010623154,0.9788986,0.00008813108,0.00071256945,0.00013616156],"about_ca_topic_score_codex":0.000053459935,"about_ca_topic_score_gemma":0.0000951686,"teacher_disagreement_score":0.013749504,"about_ca_system_score_codex":0.00012432912,"about_ca_system_score_gemma":0.000021015865,"threshold_uncertainty_score":0.9971091},"labels":[],"label_agreement":null},{"id":"W4387498580","doi":"10.3389/fbioe.2023.1253652","title":"Simple method for quantification of anionic biosurfactants in aqueous solutions","year":2023,"lang":"en","type":"article","venue":"Frontiers in Bioengineering and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Rhamnolipid; Aqueous solution; Surface tension; Chemistry; Surfactin; Pulmonary surfactant; Chromatography; Dispersant; Burkholderia; Pseudomonas; Dispersion (optics); Pseudomonas aeruginosa; Bacteria; Organic chemistry; Biochemistry; Biology","score_opus":0.015559581932885673,"score_gpt":0.24650073136256098,"score_spread":0.2309411494296753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387498580","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8986686,0.0002304987,0.09898678,0.001237047,0.00033584455,0.00032539267,0.000063732965,0.00013641993,0.000015685571],"genre_scores_gemma":[0.9673575,0.0006356291,0.031927645,0.000013241601,0.000004414246,0.000009097569,0.000024594834,0.000007834394,0.000020053798],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99921596,0.000016065545,0.00022655181,0.00022632159,0.00005328137,0.00026183238],"domain_scores_gemma":[0.99977136,0.00002716844,0.000049093313,0.00012504142,0.000003900823,0.000023466673],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003516801,0.000086489716,0.00015938123,0.0003008747,0.00002876144,0.0000045346364,0.000114582734,0.00021657553,0.000010792509],"category_scores_gemma":[0.000079838326,0.00008477715,0.00002247335,0.00085735216,0.000097475306,0.00003970799,0.00006749063,0.00008836797,0.000007379908],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017673352,0.00003539241,0.036221698,0.000025152362,0.000006493411,0.0000016230558,0.00008109505,0.0024215202,0.9210883,0.00021980498,0.0023788253,0.037502423],"study_design_scores_gemma":[0.0012361493,0.000184357,0.15468042,0.00004227203,0.000009484368,0.000007643534,0.000613621,0.48333314,0.34011242,0.0019661982,0.017375974,0.0004383404],"about_ca_topic_score_codex":0.00012660043,"about_ca_topic_score_gemma":0.00014829852,"teacher_disagreement_score":0.5809759,"about_ca_system_score_codex":0.000065720254,"about_ca_system_score_gemma":0.0000059233507,"threshold_uncertainty_score":0.34571117},"labels":[],"label_agreement":null},{"id":"W4387706524","doi":"10.3897/aca.6.e108520","title":"Transformation of Benzene Derivatives in Acidic Conditions by the Fungus Hormoconis Resinae – Reductive, Oxidative, or Both?","year":2023,"lang":"en","type":"article","venue":"ARPHA Conference Abstracts","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Environmental chemistry; Bioremediation; Kerosene; Chemistry; Petroleum product; Pollutant; Contamination; Environmental science; Food science; Petroleum; Organic chemistry; Biology","score_opus":0.028437928596764663,"score_gpt":0.26915115212805607,"score_spread":0.2407132235312914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387706524","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99104404,0.000011602978,0.000030408439,0.0016732629,0.00006133378,0.00039148895,0.00015598115,0.00003796117,0.006593907],"genre_scores_gemma":[0.998922,0.00019836448,0.0000649222,0.00012020486,0.000007815809,0.000017860259,0.00013187737,0.000007488557,0.00052945444],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99880195,0.00007940247,0.00038662215,0.00021989118,0.00025278187,0.00025934866],"domain_scores_gemma":[0.9994228,0.00012915477,0.00018809634,0.0001730555,0.000023427143,0.000063474],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003157099,0.00013783158,0.0001531279,0.00006351187,0.000116896634,0.000032305605,0.00025165157,0.000079296704,0.0024073431],"category_scores_gemma":[0.00010582508,0.00009537743,0.000034284923,0.00061697525,0.00044673335,0.00047961684,0.000042767926,0.00013922185,0.00041223495],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005653092,0.000083627936,0.0014827513,0.000009460777,0.000010823065,0.0000038867597,0.0039467276,0.000119116434,0.9850096,0.0002791023,0.005456471,0.0035418791],"study_design_scores_gemma":[0.00044625788,0.00008053739,0.54166436,0.000030868276,0.0000074127524,0.0000032482358,0.0030306356,0.00006324368,0.4524102,0.00045390535,0.0016594311,0.00014990977],"about_ca_topic_score_codex":0.00043358922,"about_ca_topic_score_gemma":0.00084425556,"teacher_disagreement_score":0.5401816,"about_ca_system_score_codex":0.000056862125,"about_ca_system_score_gemma":0.00005241705,"threshold_uncertainty_score":0.9985046},"labels":[],"label_agreement":null},{"id":"W4388206239","doi":"10.1007/s42729-023-01522-x","title":"Current Trends in Wood Preservation with Emphasis on Approaches for the Remediation of Soils Contaminated with Pentachlorophenol and Creosote","year":2023,"lang":"en","type":"article","venue":"Journal of soil science and plant nutrition","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Pentachlorophenol; Creosote; Environmental remediation; Environmental science; Bioremediation; Chromated copper arsenate; Preservative; Environmental chemistry; Waste management; Soil contamination; Dredging; Contamination; Soil water; Chemistry; Engineering; Ecology; Biology","score_opus":0.03725697729816857,"score_gpt":0.24180103473879777,"score_spread":0.2045440574406292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388206239","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987122,0.00005182423,0.000053788975,0.00090679334,0.000038556966,0.00016997509,0.000027035252,0.0000030451567,0.000036782276],"genre_scores_gemma":[0.9991366,0.00070741196,0.00008031031,0.000024547398,0.00002270714,0.000004772975,0.000015010457,0.000002168338,0.000006444201],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99917716,0.00002025654,0.00017885715,0.000114692004,0.00039639804,0.000112618865],"domain_scores_gemma":[0.99958044,0.000080539176,0.00021160599,0.00004457789,0.000040443992,0.000042416643],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008348746,0.000060649596,0.00009449703,0.0001612803,0.00009991232,0.000032950265,0.00008729146,0.000022242833,0.0000072384755],"category_scores_gemma":[0.00003543283,0.000032852415,0.000011149958,0.0006604008,0.00020166549,0.00039689874,0.000015450838,0.00006415776,5.222854e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004349671,0.0010652867,0.20721115,0.00023672421,0.000039706283,0.000014679664,0.007017864,0.0019838372,0.1976951,0.00023945913,0.00345811,0.5766884],"study_design_scores_gemma":[0.0032098477,0.0015138803,0.9421749,0.00030610352,0.000035090394,0.00003734841,0.0013962274,0.016934147,0.03335872,0.00010892494,0.000786079,0.00013874235],"about_ca_topic_score_codex":0.000032122254,"about_ca_topic_score_gemma":0.00027472645,"teacher_disagreement_score":0.7349637,"about_ca_system_score_codex":0.000046265297,"about_ca_system_score_gemma":0.000021457436,"threshold_uncertainty_score":0.13396826},"labels":[],"label_agreement":null},{"id":"W4388219975","doi":"10.3390/resources12110130","title":"Reclamation of Hydrocarbon Contaminated Soils Using Soil Amendments and Native Plant Species","year":2023,"lang":"en","type":"article","venue":"Resources","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta","funders":"University of Alberta","keywords":"Compost; Environmental science; Soil water; Revegetation; Fertilizer; Land reclamation; Amendment; Agronomy; Environmental remediation; Soil conditioner; Contamination; Soil science; Ecology; Biology","score_opus":0.02167504465672823,"score_gpt":0.22296588575650236,"score_spread":0.20129084109977413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388219975","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996478,0.000013131341,0.0000033900094,0.00006118192,0.000037504833,0.00008580559,0.000033000208,0.000025926758,0.003262061],"genre_scores_gemma":[0.9993504,0.000061991894,0.00003041245,0.00003057524,0.000011785832,6.131371e-7,0.000018048937,0.0000042842303,0.0004918815],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99939686,0.00003873602,0.0001397699,0.00012938365,0.00017974655,0.00011548691],"domain_scores_gemma":[0.99977046,0.00003455416,0.00010133387,0.000055289707,0.0000044797835,0.000033902215],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015705342,0.000065842774,0.000092985625,0.000046725545,0.00005583919,0.0000141554765,0.00005715524,0.000038613845,0.00018733973],"category_scores_gemma":[0.000027259186,0.00005518614,0.00001510189,0.00021351426,0.00011324506,0.000062596264,0.00007090635,0.000033715,0.00004085703],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002166784,0.0000136499975,0.025243128,0.000010650667,0.0000085644515,0.0000022250658,0.0022582572,0.00014116164,0.9713416,0.000008083651,0.00038712667,0.00056386617],"study_design_scores_gemma":[0.00060872536,0.00010096564,0.24112798,0.00007827829,0.000017840255,0.0000040736345,0.0014179,0.016039334,0.7360736,0.000105725725,0.00421575,0.0002098125],"about_ca_topic_score_codex":0.00017709399,"about_ca_topic_score_gemma":0.00009729658,"teacher_disagreement_score":0.235268,"about_ca_system_score_codex":0.00004451602,"about_ca_system_score_gemma":0.000002735738,"threshold_uncertainty_score":0.22504255},"labels":[],"label_agreement":null},{"id":"W4388613721","doi":"10.1101/2023.11.10.566631","title":"From <i>mec</i> cassette to <i>rdhA</i> : a key <i>Dehalobacter</i> genomic neighborhood in a chloroform and dichloromethane–transforming microbial consortium","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Dehalococcoides; Dichloromethane; Reductive dechlorination; Chemistry; Enrichment culture; Biotransformation; Bioaugmentation; Chloroform; Metagenomics; Methanogenesis; Electron acceptor; Electron donor; Microbiology; Biology; Biochemistry; Bacteria; Gene; Biodegradation; Genetics; Organic chemistry; Enzyme; Bioremediation; Solvent","score_opus":0.011688026616233574,"score_gpt":0.20410982283781454,"score_spread":0.19242179622158095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388613721","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99299496,0.00014486672,0.00016165686,0.0011405869,0.0015111854,0.0015395081,0.002141243,0.00033577907,0.000030211744],"genre_scores_gemma":[0.99563104,0.00038280856,0.0017596022,0.0015617099,0.00036147298,0.000108584485,0.000005808766,0.00017350253,0.00001549552],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99530506,0.00013181253,0.0010517009,0.0018716761,0.00050615595,0.0011335954],"domain_scores_gemma":[0.997781,0.00011782395,0.0003999088,0.0010048419,0.00005254633,0.0006439145],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006974731,0.00088096503,0.0009028759,0.00029809683,0.00016374122,0.00031588526,0.00084543554,0.0007293856,0.00033170826],"category_scores_gemma":[0.00013591151,0.00095283246,0.0001617947,0.0009215619,0.00023039967,0.00029518222,0.0014139757,0.00093360955,0.0011685444],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008997471,0.000101776255,0.054687962,0.00007585973,0.000053783493,0.00012730584,0.00016890214,0.00003022728,0.9435846,0.000007214993,0.0010614248,0.000010959243],"study_design_scores_gemma":[0.0019164918,0.00009598402,0.38172263,0.0005208303,0.00015477832,1.8346141e-7,0.000025270761,0.00012700763,0.60082364,0.000008970285,0.012470439,0.0021338132],"about_ca_topic_score_codex":0.0025617282,"about_ca_topic_score_gemma":0.000866579,"teacher_disagreement_score":0.34276098,"about_ca_system_score_codex":0.0007761939,"about_ca_system_score_gemma":0.00020890406,"threshold_uncertainty_score":0.9996092},"labels":[],"label_agreement":null},{"id":"W4388729037","doi":"10.21203/rs.3.rs-3608616/v1","title":"Oceanimonas pelagia sp. nov., a novel biosurfactant producing and plastic-degrading potential bacterium isolated from marine coastal sediment","year":2023,"lang":"en","type":"preprint","venue":"Research Square","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Science and Technology Council; National Taiwan Ocean University; Beef Cattle Research Council","keywords":"Strain (injury); Bacteria; 16S ribosomal RNA; genomic DNA; Sediment; Biology; Flagellum; DNA; Marine bacteriophage; Microbiology; Food science; Chemistry; Biochemistry; Genetics","score_opus":0.03941022158546875,"score_gpt":0.29318663702933834,"score_spread":0.2537764154438696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388729037","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940217,0.00003645824,0.00027993548,0.0009186635,0.0010507926,0.0012122652,0.0020992507,0.00019484782,0.0001860532],"genre_scores_gemma":[0.995055,0.00028826584,0.002176572,0.000033048807,0.0003327302,0.000019660634,0.001316084,0.0000921826,0.00068645866],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9947615,0.0002264856,0.0006316524,0.0016734113,0.0016239246,0.0010830124],"domain_scores_gemma":[0.9982422,0.0002516439,0.00022295247,0.0006779043,0.00011546689,0.00048982166],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0013351704,0.00051793706,0.00049414154,0.00026237062,0.00038387327,0.00044067318,0.0005971792,0.00047510653,0.0033429677],"category_scores_gemma":[0.00043560218,0.000469479,0.00013529319,0.0005910043,0.00040789423,0.00017762568,0.006557896,0.0016035272,0.0010114663],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033470802,0.00028988547,0.10184009,0.00021808634,0.0001131978,0.0001449206,0.0011774761,0.00025352626,0.8908398,0.0000031742754,0.00361805,0.0011670649],"study_design_scores_gemma":[0.0013822964,0.00031504175,0.9605569,0.0006452696,0.000050581963,0.000018721528,0.0005678503,0.01944672,0.014445872,0.00015615515,0.0014280002,0.0009865729],"about_ca_topic_score_codex":0.009419073,"about_ca_topic_score_gemma":0.0022742196,"teacher_disagreement_score":0.876394,"about_ca_system_score_codex":0.0005055381,"about_ca_system_score_gemma":0.00014731137,"threshold_uncertainty_score":0.9997757},"labels":[],"label_agreement":null},{"id":"W4388906071","doi":"10.1007/978-3-031-34447-3_14","title":"Bioremediation of Petroleum Hydrocarbons in the Subsurface","year":2023,"lang":"en","type":"book-chapter","venue":"Environmental contamination remediation and management","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Toronto","keywords":"Bioremediation; Environmental remediation; Environmental science; Petroleum; Waste management; Phytoremediation; Biochemical engineering; Natural (archaeology); Contamination; Environmental engineering; Ecology; Engineering; Chemistry; Biology; Soil water","score_opus":0.008881166090154184,"score_gpt":0.18843670983216063,"score_spread":0.17955554374200644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388906071","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15004054,0.0003396251,0.00029585703,0.0031685843,0.0012275594,0.004895705,0.00024206244,0.000169999,0.83962005],"genre_scores_gemma":[0.85253227,0.005302406,0.00008874246,0.0003995207,0.00004625484,0.000031720214,0.0005742243,0.00004195437,0.1409829],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9979991,0.00006121711,0.00053969806,0.00041774454,0.0007864631,0.00019582523],"domain_scores_gemma":[0.9991819,0.00008105112,0.00041097388,0.00026895566,0.000001853449,0.00005521548],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065282773,0.00027252958,0.00023355185,0.0001960116,0.00006907373,0.000023558598,0.0002340611,0.00018498341,0.00055000425],"category_scores_gemma":[0.000013132196,0.00023353385,0.000073480885,0.00009183076,0.0002045793,0.00012497096,0.00016965617,0.00018491897,0.0005541838],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006324656,0.00240579,0.1794524,0.0012474231,0.0011107608,0.00045975606,0.021168895,0.0012593708,0.08621255,0.2237215,0.08523488,0.3970942],"study_design_scores_gemma":[0.0027079748,0.00028590765,0.7125652,0.00015811632,0.00026440856,0.000005851974,0.0011188476,0.0016616192,0.001137271,0.003419835,0.2755924,0.0010826134],"about_ca_topic_score_codex":0.000019263749,"about_ca_topic_score_gemma":0.0002863278,"teacher_disagreement_score":0.70249176,"about_ca_system_score_codex":0.00024190856,"about_ca_system_score_gemma":0.000004488596,"threshold_uncertainty_score":0.9523234},"labels":[],"label_agreement":null},{"id":"W4388906073","doi":"10.1007/978-3-031-34447-3_15","title":"In Situ Chemical Oxidation of Petroleum Hydrocarbons","year":2023,"lang":"en","type":"book-chapter","venue":"Environmental contamination remediation and management","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Potassium permanganate; Potassium persulfate; Persulfate; Hydrogen peroxide; Ozone; Chemistry; Environmental remediation; Sodium persulfate; Environmental chemistry; Inorganic chemistry; Organic chemistry; Contamination; Polymer; Catalysis","score_opus":0.00662239529968743,"score_gpt":0.1868691913667962,"score_spread":0.18024679606710878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388906073","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27084005,0.00009394462,0.0002314656,0.0012583624,0.00075302616,0.0021316623,0.00009074935,0.000115178846,0.7244856],"genre_scores_gemma":[0.80458486,0.002065208,0.00013101395,0.00022494135,0.00003595628,0.000016881255,0.00047884317,0.000034743167,0.19242755],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983717,0.000022496004,0.00049454905,0.00042491415,0.0005188788,0.00016743108],"domain_scores_gemma":[0.9993849,0.000032302185,0.00032670965,0.00018023301,0.000001837553,0.00007402978],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00025753287,0.00024159023,0.00023942451,0.00020111795,0.000030789062,0.000012918786,0.00012362699,0.00019699421,0.00119267],"category_scores_gemma":[0.000008867987,0.00026418452,0.000060757277,0.000054861765,0.00015091234,0.00015659678,0.00022538194,0.00013574628,0.000700113],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011945313,0.0003502197,0.0051438194,0.0002313726,0.00016093855,0.00007003121,0.00090869865,0.000042569038,0.902298,0.029204858,0.012510925,0.048959114],"study_design_scores_gemma":[0.0093017835,0.0005108956,0.36494955,0.00053593924,0.00055811025,0.000013908117,0.0007014855,0.0016005358,0.14444047,0.011883491,0.46212858,0.0033752362],"about_ca_topic_score_codex":0.0000094245825,"about_ca_topic_score_gemma":0.00011038353,"teacher_disagreement_score":0.7578575,"about_ca_system_score_codex":0.00035467313,"about_ca_system_score_gemma":0.000003429734,"threshold_uncertainty_score":0.99998105},"labels":[],"label_agreement":null},{"id":"W4388912262","doi":"10.1007/978-3-031-34447-3_1","title":"Complexities of Petroleum Hydrocarbon Contaminated Sites","year":2023,"lang":"en","type":"book-chapter","venue":"Environmental contamination remediation and management","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Environmental remediation; Remedial action; Environmental science; Petroleum; Contamination; Petroleum engineering; Groundwater; Waste management; Groundwater remediation; Oil spill; Multiphase flow; Environmental engineering; Environmental planning; Engineering; Geology; Geotechnical engineering; Ecology","score_opus":0.01259359485730606,"score_gpt":0.19093474143402775,"score_spread":0.17834114657672168,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388912262","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06818573,0.00020580326,0.0001819098,0.00058361946,0.00067266886,0.0020785604,0.00037650586,0.0002480208,0.92746717],"genre_scores_gemma":[0.5886348,0.0026364487,0.00011861326,0.00022032607,0.000042550862,0.000015489446,0.0011643294,0.000052948923,0.40711454],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99802583,0.000033752825,0.00056645455,0.00048833655,0.0006708575,0.00021474806],"domain_scores_gemma":[0.9990961,0.000053017615,0.00050258345,0.00023804826,0.0000058049304,0.00010447649],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00027060803,0.0003487572,0.0003465356,0.00019676078,0.00009402586,0.000031462558,0.00016767239,0.00020543,0.0034953551],"category_scores_gemma":[0.000008664917,0.00036410987,0.00009440683,0.000047477002,0.00033766942,0.00016540599,0.0003270843,0.0001458133,0.0009831333],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00071731297,0.0012827158,0.04043653,0.0023081428,0.002418199,0.0003287583,0.005635851,0.00041178137,0.22010976,0.3435175,0.104923904,0.27790952],"study_design_scores_gemma":[0.005635033,0.0008481499,0.42110533,0.0004164311,0.0007953608,0.000012410309,0.0014765791,0.0035030672,0.0086048925,0.0073319464,0.54757,0.0027008043],"about_ca_topic_score_codex":0.0000142707895,"about_ca_topic_score_gemma":0.00011150677,"teacher_disagreement_score":0.52044904,"about_ca_system_score_codex":0.00028384436,"about_ca_system_score_gemma":0.0000037083396,"threshold_uncertainty_score":0.9998811},"labels":[],"label_agreement":null},{"id":"W4389001735","doi":"10.1007/978-3-031-47237-4_10","title":"Parameter Interactions on the Adsorption Behaviour of Cobalt onto Saline Soil with Different Biosurfactants","year":2023,"lang":"en","type":"book-chapter","venue":"Springer proceedings in energy","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Windsor; Memorial University of Newfoundland","funders":"","keywords":"Trehalose; Chemistry; Adsorption; Surfactin; Cobalt; Factorial experiment; Interaction; Matrix (chemical analysis); Environmental chemistry; Chromatography; Chemical engineering; Inorganic chemistry; Biochemistry; Organic chemistry; Bacteria; Mathematics; Biology; Bacillus subtilis; Agronomy","score_opus":0.019558524043601967,"score_gpt":0.21338335802464917,"score_spread":0.1938248339810472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389001735","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90431595,0.000012506914,0.000011247507,0.00066503807,0.00045506013,0.0003251646,0.000075409036,0.000094702766,0.094044946],"genre_scores_gemma":[0.93297535,0.00025619057,0.000053411106,0.0002944501,0.000057552825,0.000017492335,0.000024487119,0.000065763474,0.06625532],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982069,0.000008570067,0.00046788095,0.00050906785,0.00052115764,0.0002864255],"domain_scores_gemma":[0.999169,0.00007354751,0.0004355466,0.00020201101,0.000038777333,0.00008112792],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001761787,0.0003792715,0.000341467,0.00014155649,0.000054557164,0.00003951795,0.0003228309,0.0002164104,0.001440943],"category_scores_gemma":[0.000036174893,0.00024256212,0.000105678955,0.00012617867,0.00020348567,0.00009992894,0.00019276334,0.00036859573,0.00014615314],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019914412,0.0017062234,0.17627545,0.00026911683,0.00062219903,0.000054082655,0.0025624346,0.00095132616,0.6218857,0.13863243,0.025926491,0.0291231],"study_design_scores_gemma":[0.0038210482,0.002472406,0.2375525,0.0054526697,0.00052548107,0.000052516905,0.0005600598,0.0015680621,0.5118834,0.01341629,0.21769,0.005005615],"about_ca_topic_score_codex":0.00045168065,"about_ca_topic_score_gemma":0.003086815,"teacher_disagreement_score":0.19176352,"about_ca_system_score_codex":0.00030438998,"about_ca_system_score_gemma":0.000014084539,"threshold_uncertainty_score":0.9994719},"labels":[],"label_agreement":null},{"id":"W4389561519","doi":"10.7185/gold2023.19168","title":"Isotope Fractionation Reveals Limitations and Microbial Regulation of Pollutant Biodegradation at Low Concentrations","year":2023,"lang":"en","type":"article","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Pollutant; Biodegradation; Environmental chemistry; Fractionation; Isotope fractionation; Isotope; Chemistry; Environmental science; Chromatography; Organic chemistry","score_opus":0.021480429453051446,"score_gpt":0.22600000004515058,"score_spread":0.20451957059209913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389561519","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950358,0.0000048939046,0.00022864378,0.001556326,0.00016635541,0.0002874063,0.000080022575,0.00006840794,0.0025720915],"genre_scores_gemma":[0.9949249,0.000107351654,0.00066708756,0.00016076528,0.000025714211,0.000003841472,0.00025660178,0.000005980552,0.003847747],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99918985,0.00003185825,0.0002732147,0.00019287626,0.00018842687,0.00012374441],"domain_scores_gemma":[0.99959904,0.000076631535,0.0001441216,0.00010206967,0.000026079311,0.00005208594],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001790213,0.00007936154,0.00008381358,0.00006910449,0.0001577465,0.000019214816,0.000050063354,0.0000670457,0.0020715601],"category_scores_gemma":[0.00009694501,0.00007366012,0.000027498905,0.0004884903,0.000107168795,0.00026814206,0.000053290973,0.00003368995,0.0005786231],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010665079,0.000022855857,0.013918194,0.0000040671976,0.0000041455633,1.308083e-7,0.00022561286,0.00012724596,0.9697137,0.00033472112,0.013597693,0.0020409543],"study_design_scores_gemma":[0.00036899667,0.000030645082,0.78668183,0.000010081924,0.000011892132,0.00000318721,0.000120628916,0.0022138383,0.20429775,0.00034157877,0.0057852194,0.000134332],"about_ca_topic_score_codex":0.00006914215,"about_ca_topic_score_gemma":0.00034915734,"teacher_disagreement_score":0.77276367,"about_ca_system_score_codex":0.000110768015,"about_ca_system_score_gemma":0.000010904509,"threshold_uncertainty_score":0.9988407},"labels":[],"label_agreement":null},{"id":"W4389832397","doi":"10.1016/j.jece.2023.111726","title":"Petroleum hydrocarbons bioremediation by halotolerant enzymes – Progress &amp; advances","year":2023,"lang":"en","type":"article","venue":"Journal of environmental chemical engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bioremediation; Halotolerance; Petroleum; Environmental chemistry; Environmental science; Chemistry; Biochemical engineering; Waste management; Biology; Contamination; Engineering; Ecology; Salinity; Organic chemistry","score_opus":0.003992793336995625,"score_gpt":0.18897451905138643,"score_spread":0.1849817257143908,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389832397","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986309,0.0004970827,0.00016111642,0.00024977868,0.00023519038,0.00007541634,0.00002760546,0.00004558571,0.000077358985],"genre_scores_gemma":[0.9984883,0.00030467464,0.00090591155,0.000043719163,0.0001100652,0.000002601465,0.000034451296,0.000021176025,0.00008911265],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986702,0.000012048648,0.0003934222,0.000169206,0.00047268075,0.00028243283],"domain_scores_gemma":[0.9994906,0.000036761332,0.00018774599,0.00010166482,0.0000015155783,0.00018171291],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001846437,0.00016802923,0.00018980505,0.00006133723,0.00003137974,0.000020172407,0.000209851,0.00008359008,0.00043041175],"category_scores_gemma":[0.000033538614,0.00014506864,0.00010367078,0.00018054608,0.00009736059,0.000271008,0.00009165514,0.00019869077,0.0003125725],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015198346,0.00006676707,0.008928461,0.000006417472,0.000012409608,0.000007407506,0.00005511836,0.0009731254,0.98576003,0.0000010007902,0.0027576603,0.0014163823],"study_design_scores_gemma":[0.0009092271,0.00009108615,0.014465615,0.000041756193,0.00003209643,0.00006023234,0.000040823972,0.004031568,0.89440614,0.0000194461,0.085478835,0.0004231891],"about_ca_topic_score_codex":0.0000013341828,"about_ca_topic_score_gemma":4.087915e-7,"teacher_disagreement_score":0.09135392,"about_ca_system_score_codex":0.00020553473,"about_ca_system_score_gemma":0.000003937505,"threshold_uncertainty_score":0.59157276},"labels":[],"label_agreement":null},{"id":"W4389912447","doi":"10.1016/j.marpolbul.2023.115925","title":"Effects of electron acceptors and donors on anaerobic biodegradation of PAHs in marine sediments","year":2023,"lang":"en","type":"article","venue":"Marine Pollution Bulletin","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Pyrene; Phenanthrene; Fluoranthene; Biodegradation; Environmental chemistry; Chemistry; Sulfate; Anthracene; Electron acceptor; Bicarbonate; Organic chemistry","score_opus":0.004132817698159727,"score_gpt":0.19950706170562416,"score_spread":0.19537424400746442,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389912447","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979503,0.000003239531,0.000002928683,0.0009035156,0.00007202096,0.00023293916,0.000007773722,0.000023024797,0.00080424466],"genre_scores_gemma":[0.998918,0.00013714652,0.00019349443,0.00012160819,0.000009064031,0.0000040704776,0.00005514319,0.0000067894903,0.0005547085],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991315,0.00007496749,0.00024427057,0.00019468705,0.00017902341,0.0001755442],"domain_scores_gemma":[0.9996957,0.00004149493,0.00012282212,0.00009286217,0.000005177806,0.000041953146],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002705389,0.00010330545,0.000141278,0.00013820479,0.000023895547,0.0000049402424,0.00007947618,0.00005897678,0.0015028839],"category_scores_gemma":[0.00006813996,0.000093935174,0.00002653412,0.00046391104,0.000074888085,0.0000292416,0.00018795762,0.000066288914,0.00020116525],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017969392,0.00020786215,0.28199086,0.00006258607,0.00001128712,0.0000028380034,0.000104351646,0.0001350254,0.68976015,0.00009012096,0.006353461,0.021101775],"study_design_scores_gemma":[0.00056002254,0.0001209317,0.6603176,0.0000107680125,0.0000044923845,3.7330162e-7,0.000007800559,0.000044980785,0.33619073,0.00003555773,0.0026364066,0.00007031873],"about_ca_topic_score_codex":0.0012038711,"about_ca_topic_score_gemma":0.0002146533,"teacher_disagreement_score":0.37832677,"about_ca_system_score_codex":0.00008200587,"about_ca_system_score_gemma":0.0000051526135,"threshold_uncertainty_score":0.99940985},"labels":[],"label_agreement":null},{"id":"W4390086306","doi":"10.1016/j.marpolbul.2023.115919","title":"Comparison of two field systems for determination of crude oil biodegradation in cold seawater","year":2023,"lang":"en","type":"article","venue":"Marine Pollution Bulletin","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; National Research Council Canada","funders":"Norges Forskningsråd","keywords":"Biodegradation; Oil spill; Seawater; Oil field; Bioavailability; Environmental chemistry; Environmental science; Crude oil; Extrapolation; Adsorption; Chemistry; Environmental engineering; Petroleum engineering; Geology; Ecology; Biology; Organic chemistry","score_opus":0.0215533413040445,"score_gpt":0.2858074938789294,"score_spread":0.2642541525748849,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390086306","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99560475,0.000008330281,0.00068537955,0.0019459848,0.00019512238,0.00022636977,0.00003357997,0.000027041977,0.0012734666],"genre_scores_gemma":[0.9974776,0.00001827317,0.0006054066,0.000056668985,0.00001561105,0.0000127153535,0.00005981727,0.0000048979828,0.0017490406],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99919116,0.000043296255,0.00035337883,0.00013255126,0.00015369398,0.00012590755],"domain_scores_gemma":[0.9996525,0.000051838073,0.00016419264,0.000091925765,0.000016242366,0.000023321827],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032483472,0.00006715921,0.00014450286,0.00008664567,0.000024667253,0.000007231247,0.00008264484,0.00005435025,0.0006676084],"category_scores_gemma":[0.00006804154,0.00006236704,0.00003350497,0.00024385237,0.000035637575,0.000029007764,0.00007405203,0.000037177746,0.000121295874],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009541082,0.00015764628,0.24054633,0.00012450099,0.0000041439325,6.078229e-7,0.00022720468,0.00066580076,0.71471167,0.00024168642,0.019860176,0.023364801],"study_design_scores_gemma":[0.0017647542,0.00021447334,0.09839402,0.00005916529,0.000014749265,0.0000010358083,0.00014473709,0.022266082,0.8054783,0.00005359348,0.07138802,0.00022111938],"about_ca_topic_score_codex":0.0015211605,"about_ca_topic_score_gemma":0.00043415357,"teacher_disagreement_score":0.14215231,"about_ca_system_score_codex":0.0000616111,"about_ca_system_score_gemma":0.0000052005644,"threshold_uncertainty_score":0.7309844},"labels":[],"label_agreement":null},{"id":"W4390331675","doi":"10.1016/j.envpol.2023.123224","title":"Fate, behaviour and microbial response of diluted bitumen and conventional crude spills in a simulated warm freshwater environment","year":2023,"lang":"en","type":"article","venue":"Environmental Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Natural Resources Canada","funders":"EPCOR; Government of Canada","keywords":"Environmental science; Oil spill; Asphalt; Environmental chemistry; Ecology; Environmental engineering; Biology; Chemistry; Geography; Archaeology","score_opus":0.006833085443331821,"score_gpt":0.20180429525664964,"score_spread":0.1949712098133178,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390331675","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988136,0.00003473195,0.000008358862,0.0003233183,0.000059613474,0.00034158683,0.00037313244,0.000025112122,0.00002051786],"genre_scores_gemma":[0.99896395,0.0001784382,0.0001378174,0.00009853748,0.000010542912,0.0000039572706,0.0001530332,0.000014886165,0.00043884895],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99862176,0.00013462125,0.00034552938,0.0003729123,0.00024827098,0.00027691748],"domain_scores_gemma":[0.99962693,0.000029477103,0.00010725468,0.00013173134,6.8947094e-7,0.000103888015],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00039209521,0.00017628846,0.00016903286,0.00011505104,0.000075541866,0.000013748858,0.00008060372,0.000120544966,0.0018695818],"category_scores_gemma":[0.000012018857,0.00017034075,0.000047985184,0.00013994942,0.00041048092,0.00015586772,0.0002591931,0.00009932654,0.00036204854],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022492692,0.00011192214,0.1811804,0.000003701425,0.000007600094,0.000009113799,0.00024988732,0.00030321002,0.8173013,0.0000014244109,0.00030323106,0.00030333523],"study_design_scores_gemma":[0.0013761172,0.00010700452,0.8801623,0.0000141041255,0.000013760585,0.000008149475,0.000095515534,0.00057583983,0.116113715,0.000027561864,0.0013216214,0.00018431515],"about_ca_topic_score_codex":0.00017161264,"about_ca_topic_score_gemma":0.00006861703,"teacher_disagreement_score":0.70118755,"about_ca_system_score_codex":0.00022221339,"about_ca_system_score_gemma":0.0000044151843,"threshold_uncertainty_score":0.99904287},"labels":[],"label_agreement":null},{"id":"W4390888323","doi":"10.32672/jse.v9i1.776","title":"Aplikasi Surfaktan Alami dan Sintetis untuk Meningkatkan Penghilangan Total Petroleum Hidrokarbon dari Tanah Tercemar","year":2023,"lang":"en","type":"article","venue":"Jurnal Serambi Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Encana (Canada)","funders":"","keywords":"Pulmonary surfactant; Environmental remediation; Petroleum; Environmental pollution; Pulp and paper industry; Pollution; Contamination; Chemistry; Soil contamination; Environmental science; Saponin; Soil water; Organic chemistry; Engineering","score_opus":0.005352270339729024,"score_gpt":0.18894986503630343,"score_spread":0.1835975946965744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390888323","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959539,0.000014358289,0.00014242502,0.00047575374,0.00064222066,0.00014904015,0.000023512888,0.00038666898,0.0022120741],"genre_scores_gemma":[0.99762154,0.000029899315,0.00041507208,0.00011579197,0.00016855473,0.0000048754837,0.00006139218,0.000051998148,0.0015308532],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980686,0.000032369648,0.00036637599,0.0004204841,0.00048563528,0.0006265871],"domain_scores_gemma":[0.9993079,0.0000452191,0.00008958304,0.0002730799,0.000010153154,0.00027408396],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003036751,0.00029824287,0.0002592947,0.000121460675,0.00013922933,0.00011924631,0.00030210867,0.0001268187,0.00063658546],"category_scores_gemma":[0.000057114645,0.00028819783,0.000120587254,0.0005777771,0.000049261333,0.00025203932,0.00023253533,0.00034439034,0.00079111796],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021463042,0.000045541354,0.038290177,0.000025329784,0.000036111152,0.00015009646,0.0003793355,0.02003596,0.9357261,0.000037749545,0.003408498,0.0018436579],"study_design_scores_gemma":[0.0013089546,0.00026534876,0.75598997,0.00012664514,0.000056015637,0.00022451619,0.00027740217,0.11969317,0.070670016,0.0000186737,0.04996076,0.0014085381],"about_ca_topic_score_codex":0.00018818789,"about_ca_topic_score_gemma":0.000073329495,"teacher_disagreement_score":0.86505604,"about_ca_system_score_codex":0.00028507417,"about_ca_system_score_gemma":0.000012858183,"threshold_uncertainty_score":0.9999869},"labels":[],"label_agreement":null},{"id":"W4391033623","doi":"10.3389/fchem.2024.1327113","title":"Sustainable biosurfactant production from secondary feedstock—recent advances, process optimization and perspectives","year":2024,"lang":"en","type":"article","venue":"Frontiers in Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Bio-Based Industries Joint Undertaking; Research Grants Council, University Grants Committee; European Commission; City University of Hong Kong","keywords":"Raw material; Glycolipid; Biochemical engineering; Bioremediation; Refining (metallurgy); Chemistry; Production (economics); Commodity chemicals; Productivity; Biotechnology; Pulp and paper industry; Organic chemistry; Environmental science; Biochemistry; Catalysis; Engineering; Economics; Biology; Bacteria","score_opus":0.003958783049246148,"score_gpt":0.20228361444248436,"score_spread":0.1983248313932382,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391033623","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9737224,0.015894054,0.001521425,0.0014981553,0.00070691813,0.00038857892,0.00005202919,0.00013903197,0.0060773958],"genre_scores_gemma":[0.9852896,0.005542953,0.00612533,0.000041131138,0.00011851396,0.000014151634,0.00008964855,0.000021801628,0.0027569172],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989999,0.000013522716,0.00015779652,0.0004828216,0.00013246221,0.0002135231],"domain_scores_gemma":[0.99976057,0.000006765297,0.00004162618,0.000111592264,0.000016234935,0.000063183455],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00011692009,0.00013347903,0.00011334232,0.00002649795,0.00006463808,0.00006734729,0.000093074654,0.0000925817,0.0017493158],"category_scores_gemma":[0.00005304304,0.00012604348,0.00001798787,0.0003335324,0.00014228844,0.00042823245,0.000055319604,0.00016722306,0.000009718588],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034270668,0.000576519,0.11264693,0.0015092259,0.00012389345,0.0001419571,0.019540263,0.0254495,0.58544487,0.000012221576,0.08933217,0.16487975],"study_design_scores_gemma":[0.0010263289,0.000050809085,0.008122902,0.00023278856,0.000054787324,0.000026380058,0.04325557,0.021387756,0.7950906,0.0019963882,0.1275791,0.0011766145],"about_ca_topic_score_codex":0.00004042457,"about_ca_topic_score_gemma":0.000010916405,"teacher_disagreement_score":0.20964572,"about_ca_system_score_codex":0.0003942784,"about_ca_system_score_gemma":0.00004555439,"threshold_uncertainty_score":0.9991632},"labels":[],"label_agreement":null},{"id":"W4391050171","doi":"10.1016/j.jhazmat.2024.133571","title":"Activated DBP degradation and relevant signal transduction path via quorum sensing autoinducers in Streptomyces sp. SH5","year":2024,"lang":"en","type":"article","venue":"Journal of Hazardous Materials","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Basic and Applied Basic Research Foundation of Guangdong Province; Science and Technology Planning Project of Guangdong Province; Guangzhou Municipal Science and Technology Project; National Natural Science Foundation of China","keywords":"Quorum sensing; Chemistry; Dibutyl phthalate; Signal transduction; Biochemistry; Cell biology; Gene; Biology","score_opus":0.007963619440339131,"score_gpt":0.21736878843950072,"score_spread":0.2094051689991616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391050171","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99792784,0.000057613244,0.00017431639,0.0008518673,0.0008032754,0.00010642041,0.000013756395,0.00002000323,0.00004489075],"genre_scores_gemma":[0.9989269,0.00014277577,0.0007145386,0.00004455667,0.00010918797,1.9538342e-7,0.000005903485,0.000011586076,0.000044349985],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988172,0.00011888886,0.000487517,0.00016362839,0.00024575423,0.00016701943],"domain_scores_gemma":[0.99964464,0.000028763237,0.00019593864,0.000052776628,0.0000133253325,0.00006457968],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006639906,0.00012002975,0.00020347895,0.000104284496,0.000045709876,0.00014052921,0.000059383718,0.000082886625,0.0014606619],"category_scores_gemma":[0.00002039427,0.00009167632,0.00003845945,0.00015818301,0.000054380613,0.0004180983,0.000020533067,0.00011277175,0.000036469777],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007911537,0.000021152002,0.0004976824,0.00002021885,0.000013003661,0.000060601466,0.00034655025,0.000040268373,0.9816581,0.0000017890669,0.00039238896,0.016869152],"study_design_scores_gemma":[0.00030339207,0.0001122696,0.01270971,0.0001394152,0.000022755583,0.00026383018,0.00013833892,0.00022061002,0.9847264,0.00011166561,0.0011255752,0.00012602175],"about_ca_topic_score_codex":0.000108489636,"about_ca_topic_score_gemma":0.00004532412,"teacher_disagreement_score":0.01674313,"about_ca_system_score_codex":0.00018311368,"about_ca_system_score_gemma":0.000032388747,"threshold_uncertainty_score":0.9994521},"labels":[],"label_agreement":null},{"id":"W4391256801","doi":"10.1016/j.seh.2024.100062","title":"Modelling phytoremediation: Concepts, methods, challenges and perspectives","year":2024,"lang":"en","type":"article","venue":"Soil & Environmental Health","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Athabasca University","funders":"Government of Alberta","keywords":"Phytoremediation; Biogeochemical cycle; Environmental science; Mineralization (soil science); Ecology; Soil water; Soil science; Biology","score_opus":0.045465699274790834,"score_gpt":0.31601471336674103,"score_spread":0.2705490140919502,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391256801","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80095285,0.168376,0.006565136,0.012902908,0.0011127635,0.00093733927,0.00013390507,0.00037391883,0.008645155],"genre_scores_gemma":[0.9490429,0.043782614,0.0062838187,0.00035717533,0.00012709855,0.000006670331,0.000019088482,0.000021631187,0.00035897215],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985554,0.0001508713,0.0002282492,0.0005181806,0.00024064323,0.00030660603],"domain_scores_gemma":[0.99953586,0.00005798781,0.000056243938,0.00014698386,8.724601e-7,0.00020204425],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005193622,0.00017381833,0.0001673678,0.000032197433,0.00013798322,0.00003182849,0.00009081927,0.000071017595,0.001208249],"category_scores_gemma":[0.000004707718,0.00015581615,0.000047853606,0.00006703881,0.0002759516,0.00021987404,0.00010883529,0.00016256474,0.0005058042],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030435493,0.00025522683,0.0022736674,0.00017325458,0.000049463477,0.000012841367,0.051622443,0.0016143908,0.029902393,0.0015332266,0.002897043,0.9096356],"study_design_scores_gemma":[0.0024215316,0.0012867912,0.12285425,0.00039020064,0.00009893787,0.00016540501,0.049697373,0.20046042,0.020345299,0.0062327953,0.5930831,0.0029639164],"about_ca_topic_score_codex":0.00008955829,"about_ca_topic_score_gemma":0.000029487117,"teacher_disagreement_score":0.9066717,"about_ca_system_score_codex":0.00041282384,"about_ca_system_score_gemma":0.000018252333,"threshold_uncertainty_score":0.9997048},"labels":[],"label_agreement":null},{"id":"W4391573310","doi":"10.1007/s11356-024-32109-3","title":"Potential of stable isotope analysis to deduce anaerobic biodegradation of ethyl tert-butyl ether (ETBE) and tert-butyl alcohol (TBA) in groundwater: a review","year":2024,"lang":"en","type":"review","venue":"Environmental Science and Pollution Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Shell (Canada)","funders":"Shell Global Solutions International; Shell","keywords":"Biodegradation; Anoxic waters; Chemistry; Environmental chemistry; Methanogenesis; Cometabolism; Isotope analysis; Anaerobic exercise; Organic chemistry; Bioremediation; Methane; Ecology; Contamination; Biology","score_opus":0.048809591763427335,"score_gpt":0.36676025709472726,"score_spread":0.3179506653312999,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391573310","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10458318,0.89156765,0.00002230778,0.00086738577,0.00011428613,0.0021934502,0.00036130688,0.000012610611,0.000277847],"genre_scores_gemma":[0.14297536,0.8559585,0.00021905964,0.00010800374,0.000015256681,0.000031342213,0.000056022902,0.000014758225,0.00062165875],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99574244,0.00041885412,0.0008054048,0.0009437387,0.0015000438,0.0005894902],"domain_scores_gemma":[0.9990346,0.00003744234,0.00022385243,0.00041347105,0.000016464286,0.00027416577],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.004140071,0.00031237703,0.0008627826,0.00089879107,0.00019059074,0.00008896861,0.00054430676,0.00018801834,0.0013082192],"category_scores_gemma":[0.00008064768,0.00023196671,0.00016796056,0.0040346645,0.0018425632,0.00035516787,0.00090293185,0.00038740787,0.00021224015],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003412077,0.00045597923,0.00275988,0.005055634,0.00018169617,0.000015091067,0.0006253589,0.000015107729,0.20980269,0.000034491637,0.0021082344,0.7789117],"study_design_scores_gemma":[0.0009172743,0.0011205759,0.06059537,0.014694502,0.0025871291,0.00006552754,0.0006972639,0.0003753643,0.0124537805,0.00009515922,0.9044357,0.001962346],"about_ca_topic_score_codex":0.0013175923,"about_ca_topic_score_gemma":0.0002647093,"teacher_disagreement_score":0.9023275,"about_ca_system_score_codex":0.000641334,"about_ca_system_score_gemma":0.000113064125,"threshold_uncertainty_score":0.9996047},"labels":[],"label_agreement":null},{"id":"W4391662169","doi":"10.47430/ujmr.2382.014","title":"Toxicological Risk Evaluation of Polycyclic Aromatic Hydrocarbons in Soils from a Petroleum Spillage Site at Kokori in the Niger Delta Region of Nigeria","year":2023,"lang":"en","type":"article","venue":"UMYU Journal of Microbiology Research (UJMR)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Petrochemical; Refinery; Effluent; Waste management; Environmental science; Environmental chemistry; Characterization (materials science); Chemistry; Engineering; Materials science; Nanotechnology","score_opus":0.06330807594674219,"score_gpt":0.32943646714933794,"score_spread":0.26612839120259574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391662169","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998271,0.00017796698,0.0000031774484,0.0008830804,0.00011035254,0.00032782863,0.00003599385,0.00000422481,0.00018636885],"genre_scores_gemma":[0.99929446,0.00046019963,0.000048403577,0.00006738954,0.000031922085,0.000004733905,0.000030007037,0.000007763379,0.00005512783],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9946698,0.0031397294,0.0008883224,0.0002600928,0.000578242,0.0004638345],"domain_scores_gemma":[0.99824226,0.0008202897,0.0005572528,0.00028193108,0.00002167818,0.00007658617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0092884805,0.00013954981,0.00039897312,0.00041584717,0.00008294855,0.000012526395,0.0005919342,0.00023341908,0.00029787666],"category_scores_gemma":[0.00112125,0.00009113729,0.00012669133,0.0009751151,0.0005708905,0.00009671937,0.00023781863,0.00058411417,0.00015660013],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014229705,0.00013879492,0.2944632,0.0000024544518,0.00001517891,0.000030119154,0.001157743,0.00008666197,0.7016048,2.7624807e-7,0.0017652895,0.0005932255],"study_design_scores_gemma":[0.0026807403,0.00080487505,0.925098,0.00011657038,0.00003378373,0.00013994663,0.0011281939,0.0009968304,0.067160435,0.0010791665,0.00058338925,0.00017804623],"about_ca_topic_score_codex":0.00042079823,"about_ca_topic_score_gemma":0.0037798604,"teacher_disagreement_score":0.6344443,"about_ca_system_score_codex":0.00036250486,"about_ca_system_score_gemma":0.00009106297,"threshold_uncertainty_score":0.3716471},"labels":[],"label_agreement":null},{"id":"W4391751201","doi":"10.3389/fmars.2024.1354063","title":"Rapid dilution effectively decreases hydrocarbons following small oil spills, but impacts on microeukaryote communities are still observed","year":2024,"lang":"en","type":"article","venue":"Frontiers in Marine Science","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Bedford Institute of Oceanography; Fisheries and Oceans Canada","funders":"","keywords":"Dilution; Oil spill; Environmental science; Petroleum engineering; Environmental chemistry; Chemistry; Environmental protection; Geology","score_opus":0.017817178985863026,"score_gpt":0.217318055111946,"score_spread":0.19950087612608297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391751201","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947254,0.00016416585,0.00010955644,0.0002531003,0.0016438474,0.00017393543,0.000022000822,0.00011291896,0.0027950814],"genre_scores_gemma":[0.9937774,0.0002576008,0.005056379,0.0004246827,0.00003354142,0.000008027248,0.000019491945,0.000015549598,0.00040730662],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980787,0.00014267156,0.00026416668,0.00048594092,0.00046158143,0.0005669611],"domain_scores_gemma":[0.99924743,0.000098389435,0.00008041977,0.0003432165,0.000009116298,0.0002214112],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010058973,0.00025172686,0.00023703348,0.00027007418,0.00025035624,0.0002150537,0.0006542041,0.000079604935,0.00014647418],"category_scores_gemma":[0.0003330218,0.00021622318,0.00010908895,0.0012269719,0.0006759737,0.00048130652,0.00056897895,0.00029986084,0.00010935525],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007229239,0.0001540515,0.75692964,0.000043590622,0.000016113256,0.00007528031,0.0007323909,0.00012296622,0.18034151,0.000017810598,0.0024856834,0.059008665],"study_design_scores_gemma":[0.00052550057,0.00017646348,0.94238853,0.00035219712,0.000023803024,0.000008905912,0.00060851977,0.00383089,0.04868085,0.00038332585,0.0025392412,0.0004817493],"about_ca_topic_score_codex":0.0016032433,"about_ca_topic_score_gemma":0.0007639661,"teacher_disagreement_score":0.18545891,"about_ca_system_score_codex":0.0007535609,"about_ca_system_score_gemma":0.000095774965,"threshold_uncertainty_score":0.8817325},"labels":[],"label_agreement":null},{"id":"W4391956503","doi":"10.1007/s12010-024-04855-0","title":"Uncovering Anaerobic Hydrocarbon Biodegradation Pathways in Oil Sands Tailings from Two Different Tailings Ponds via Metabolite and Functional Gene Analyses","year":2024,"lang":"en","type":"article","venue":"Applied Biochemistry and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Helmholtz-Alberta Initiative; Canada Foundation for Innovation","keywords":"Tailings; Biodegradation; Oil sands; Environmental chemistry; Alkane; Chemistry; Hydrocarbon; Naphtha; Metabolite; Microbial biodegradation; Organic chemistry; Microorganism; Asphalt; Geology; Biochemistry; Bacteria; Catalysis","score_opus":0.010664697884645436,"score_gpt":0.21442715210366814,"score_spread":0.2037624542190227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391956503","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977728,0.0011551732,0.00018270656,0.00045752188,0.00007606361,0.000054816323,0.000044325858,0.00011898973,0.0001375618],"genre_scores_gemma":[0.9980511,0.0010088617,0.0004551154,0.0001109953,0.00005586187,0.0000069053453,0.00025105535,0.000010610389,0.000049489663],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99869466,0.00001000186,0.00026547443,0.0006438053,0.00013924565,0.00024680258],"domain_scores_gemma":[0.99966186,0.00003138062,0.00006407438,0.0001663529,0.0000036411564,0.00007266778],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011008533,0.00023281672,0.00021801871,0.000092395865,0.000071580536,0.000053854495,0.00010149533,0.00035121065,0.0001391904],"category_scores_gemma":[0.00001149885,0.00019250314,0.000037397785,0.00039238943,0.00027016047,0.000060956678,0.00019900761,0.00025152092,0.000019222878],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033124285,0.000024618668,0.0012762791,0.000018439096,0.000024230118,0.0000056062013,0.000037494632,0.000013344421,0.97540003,0.00004200823,0.000017942915,0.023106895],"study_design_scores_gemma":[0.00039420885,0.000014086032,0.0017624355,0.000014416836,0.00003472105,0.00001014197,0.000056622335,0.0015368818,0.99473333,0.000785079,0.00042971413,0.0002283321],"about_ca_topic_score_codex":0.00028356927,"about_ca_topic_score_gemma":0.00007667194,"teacher_disagreement_score":0.022878563,"about_ca_system_score_codex":0.00008260643,"about_ca_system_score_gemma":0.000011019245,"threshold_uncertainty_score":0.78500503},"labels":[],"label_agreement":null},{"id":"W4392196173","doi":"10.1007/s11356-024-32593-7","title":"Residual hydrocarbons in long-term contaminated soils: implications to risk-based management","year":2024,"lang":"en","type":"article","venue":"Environmental Science and Pollution Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Douglas College","funders":"Newcastle University; Cooperative Research Centre for Contamination Assessment and Remediation of the Environment","keywords":"Ecotoxicology; Environmental science; Residual; Term (time); Contamination; Soil water; Soil contamination; Environmental chemistry; Soil science; Chemistry; Ecology; Biology; Mathematics","score_opus":0.02115925760528205,"score_gpt":0.3154834571236869,"score_spread":0.2943241995184049,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392196173","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99274373,0.000100024394,0.000077409895,0.0030049297,0.000075474265,0.0005663622,0.000049508668,0.000032017582,0.0033505275],"genre_scores_gemma":[0.99855447,0.00027114872,0.00013767705,0.00029625147,0.000017702483,0.000035484365,0.00001274562,0.000007756412,0.00066674285],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9976283,0.00012350264,0.00019432078,0.00061740505,0.0008872659,0.0005492275],"domain_scores_gemma":[0.99943066,0.00003966791,0.000020605314,0.00023559172,0.000002415206,0.00027108446],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.002153721,0.00011377177,0.000077658995,0.00037292534,0.00043918038,0.00016062001,0.00033225713,0.000052644646,0.0007070879],"category_scores_gemma":[0.00003926949,0.00010067824,0.000019750272,0.0015827924,0.0011109165,0.0002593016,0.0003640519,0.00023283866,0.0013586859],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036969534,0.00021590994,0.30524045,0.000012995592,0.000006413499,0.000037113357,0.0005784491,0.0001436246,0.5852696,0.00019065327,0.0032952619,0.104972616],"study_design_scores_gemma":[0.00019822428,0.00008265688,0.9839982,0.0000326825,0.000003930128,0.000003057264,0.00011636124,0.00068052736,0.011864335,0.00008032001,0.0028047701,0.00013492774],"about_ca_topic_score_codex":0.00026223258,"about_ca_topic_score_gemma":0.00045245752,"teacher_disagreement_score":0.6787577,"about_ca_system_score_codex":0.00091612735,"about_ca_system_score_gemma":0.000042206917,"threshold_uncertainty_score":0.99941885},"labels":[],"label_agreement":null},{"id":"W4392235299","doi":"10.1002/cjce.25216","title":"Bio‐enhanced oil recovery ( <scp>BEOR</scp> ) methods: All‐important review of the occasions and challenges","year":2024,"lang":"en","type":"article","venue":"The Canadian Journal of Chemical Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Microbial enhanced oil recovery; Biochemical engineering; Enhanced oil recovery; Oil production; Environmental science; Biotechnology; Microorganism; Petroleum engineering; Engineering; Biology","score_opus":0.01867023885773628,"score_gpt":0.23212461513793847,"score_spread":0.2134543762802022,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392235299","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.733544,0.24604711,0.00011609107,0.016998092,0.0012358631,0.00016897162,0.000042476335,0.00002208205,0.0018253094],"genre_scores_gemma":[0.94675887,0.04932489,0.0024825393,0.0010410895,0.00015220226,0.0000018365479,0.0000015221082,0.00002714094,0.00020992708],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992515,0.00003377979,0.00031291,0.000089909496,0.00013938519,0.00017251879],"domain_scores_gemma":[0.99937576,0.00017393717,0.000098690594,0.00012456188,0.00001366453,0.00021336059],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007363278,0.00009288594,0.00015918523,0.000030162502,0.000028412229,0.000021209424,0.00024666302,0.000053131713,0.00012093251],"category_scores_gemma":[0.0006332646,0.00005196142,0.00009307354,0.0001765681,0.00009249633,0.000068540736,0.00003604736,0.00023383989,0.000005484888],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[7.1941207e-7,0.0000034685006,0.000017471712,0.00047899564,0.000038146885,0.00000840344,0.0003926958,0.000068075096,0.9827298,0.000055175922,0.0030707754,0.013136289],"study_design_scores_gemma":[0.00012934222,0.00002829167,0.0004239006,0.004512774,0.00011607353,0.00023787328,0.00005854108,0.00061081245,0.7877235,0.000170346,0.20586742,0.000121109486],"about_ca_topic_score_codex":0.00010532946,"about_ca_topic_score_gemma":0.00017930435,"teacher_disagreement_score":0.21321486,"about_ca_system_score_codex":0.00011392556,"about_ca_system_score_gemma":0.00008877895,"threshold_uncertainty_score":0.21189252},"labels":[],"label_agreement":null},{"id":"W4392624141","doi":"10.1007/s12649-024-02425-3","title":"Environmental Impact Associated with Oil and Grease and Their Emerging Mitigation Strategies","year":2024,"lang":"en","type":"article","venue":"Waste and Biomass Valorization","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Lakehead University","funders":"","keywords":"Grease; Environmental science; Business; Environmental impact assessment; Waste management; Natural resource economics; Engineering; Chemistry; Economics; Political science","score_opus":0.005154400152091977,"score_gpt":0.19780762512293443,"score_spread":0.19265322497084245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392624141","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990695,0.00020552971,0.00012834204,0.0001422738,0.000045870584,0.000046331872,0.000061577426,0.00003725488,0.0002632806],"genre_scores_gemma":[0.99936384,0.00030430022,0.000029094519,0.0000254694,0.000025276711,0.0000014527379,0.00012441282,0.000008804913,0.00011735718],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994342,0.000028933906,0.000099616096,0.00022192448,0.00009820065,0.00011713872],"domain_scores_gemma":[0.99982655,0.000018983259,0.000038039652,0.00004250054,0.0000021126796,0.000071812],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009782582,0.000120716104,0.00007388788,0.000035735833,0.00010086662,0.00015623766,0.000022013312,0.000053523367,0.00011027873],"category_scores_gemma":[0.0000051361735,0.000078698875,0.0000133110525,0.00013674612,0.0001235756,0.00039938968,0.0000345084,0.000037248374,0.0000062664158],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016736316,0.000021035246,0.057704058,0.000022099162,0.000030610492,0.0000041775797,0.000943,0.00001214307,0.90344626,0.000026331472,0.00007889709,0.037694655],"study_design_scores_gemma":[0.0016708069,0.0006402143,0.85677314,0.00028061972,0.00013623286,0.00007024086,0.004354719,0.03227743,0.10059306,0.0005035259,0.0017411958,0.00095879356],"about_ca_topic_score_codex":0.000056997877,"about_ca_topic_score_gemma":0.000066869485,"teacher_disagreement_score":0.8028532,"about_ca_system_score_codex":0.00004635487,"about_ca_system_score_gemma":0.000008363162,"threshold_uncertainty_score":0.3209247},"labels":[],"label_agreement":null},{"id":"W4393132372","doi":"10.1016/j.spc.2024.03.021","title":"Environmental evaluation of emerging bakery waste oil-derived sophorolipids production by performing a dynamic life cycle assessment","year":2024,"lang":"en","type":"article","venue":"Sustainable Production and Consumption","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Life-cycle assessment; Raw material; Waste management; Environmental impact assessment; Production (economics); Valorisation; Life cycle inventory; Environmental science; Food waste; Engineering; Municipal solid waste; Environmental engineering; Pulp and paper industry; Chemistry; Economics","score_opus":0.008209386619774299,"score_gpt":0.2540042430065401,"score_spread":0.24579485638676582,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393132372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958078,0.0017580735,0.00010199838,0.0009451953,0.0006525267,0.0004191367,0.000009533878,0.00006867377,0.00023701094],"genre_scores_gemma":[0.99547493,0.0019850521,0.000113815324,0.000028783923,0.00008721134,0.0000394417,0.000064581625,0.000017105336,0.0021890956],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9981495,0.00014804219,0.00032775672,0.000560259,0.0005440006,0.00027040765],"domain_scores_gemma":[0.9995697,0.0000097255315,0.0001230394,0.00017579173,0.000036669386,0.00008506059],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013720628,0.0001692975,0.00013687632,0.000104707666,0.00024956683,0.00006487107,0.000058528472,0.00007836726,0.0013707549],"category_scores_gemma":[0.00011477619,0.00016405493,0.000051648396,0.0002153489,0.00018310604,0.00069845055,0.00008332063,0.000146495,0.000058452813],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043081214,0.000121735924,0.003894819,0.00030607867,0.000038463226,9.211343e-7,0.00090872915,0.0020090402,0.8312165,0.000022060123,0.001214839,0.1602237],"study_design_scores_gemma":[0.0028010113,0.0005151905,0.108392626,0.0005917257,0.0012741808,0.00016675118,0.04070637,0.48087433,0.33555982,0.0009115798,0.02586788,0.0023385454],"about_ca_topic_score_codex":0.000047499914,"about_ca_topic_score_gemma":0.000016066671,"teacher_disagreement_score":0.49565673,"about_ca_system_score_codex":0.0006561292,"about_ca_system_score_gemma":0.00006431408,"threshold_uncertainty_score":0.9995421},"labels":[],"label_agreement":null},{"id":"W4393197585","doi":"10.3389/fchem.2024.1382547","title":"Advances in the production of biosurfactants as green ingredients in home and personal care products","year":2024,"lang":"en","type":"article","venue":"Frontiers in Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Personal care; Business; Commercialization; Production (economics); Biochemical engineering; Marketing; Engineering; Economics","score_opus":0.004201779128008547,"score_gpt":0.20781596291316676,"score_spread":0.20361418378515822,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393197585","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953137,0.0026284188,4.7348647e-7,0.00040115835,0.00039508054,0.00015462705,0.000013055561,0.000007758894,0.0010857191],"genre_scores_gemma":[0.9989764,0.00061758276,0.00017998945,0.000019890036,0.0000342238,0.0000041093967,0.000010255543,0.000004975564,0.0001525671],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99915296,0.00002248297,0.00017036176,0.0003093901,0.00019545862,0.00014936377],"domain_scores_gemma":[0.99983597,0.000008862604,0.000036159432,0.00009353849,0.000005421096,0.00002002734],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020359198,0.00009203827,0.0001041083,0.00003583917,0.000016243406,0.0000131862125,0.00012635684,0.00006315306,0.000056750807],"category_scores_gemma":[0.00006721882,0.000070566064,0.000013334852,0.00045465244,0.00015115585,0.00018139282,0.000045093435,0.00014854374,0.0000049959294],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003818289,0.00005362687,0.7366757,0.0003717087,0.0000024195967,0.000018092387,0.009099823,0.000011489078,0.2275476,3.341005e-7,0.0012235063,0.024957541],"study_design_scores_gemma":[0.00088668545,0.00007194646,0.4867989,0.000833306,0.000015418733,0.00004123697,0.02089839,0.00043379996,0.47407877,0.00034364252,0.014979538,0.0006183501],"about_ca_topic_score_codex":0.00009123615,"about_ca_topic_score_gemma":0.00012391718,"teacher_disagreement_score":0.24987678,"about_ca_system_score_codex":0.00014255857,"about_ca_system_score_gemma":0.000020742964,"threshold_uncertainty_score":0.28776008},"labels":[],"label_agreement":null},{"id":"W4393622279","doi":"10.1007/978-981-97-2000-2_26","title":"The Use of Activated Biochar as Growth Support for Microorganisms Capable of Degrading PAHS","year":2024,"lang":"en","type":"book-chapter","venue":"Springer Proceedings in Materials","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Technologique des Résidus Industriels; Université du Québec en Abitibi-Témiscamingue","funders":"","keywords":"Biochar; Microorganism; Environmental science; Environmental chemistry; Chemistry; Biology; Bacteria; Organic chemistry","score_opus":0.024257141442980773,"score_gpt":0.22272075617457157,"score_spread":0.1984636147315908,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393622279","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9692997,0.000084374515,0.0000035171038,0.00022347026,0.0012048027,0.0017531827,0.00068426674,0.00006971086,0.026676979],"genre_scores_gemma":[0.8594094,0.00074916775,0.0019538987,0.00012730839,0.00014749219,0.000029400531,0.000060606373,0.00016771359,0.13735504],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998338,0.0000048093493,0.0007068676,0.00040333188,0.0002553415,0.00029169454],"domain_scores_gemma":[0.99917066,0.00006192787,0.00053051894,0.00012480922,0.000060441063,0.00005162149],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006572003,0.00028975014,0.00043453265,0.0001009082,0.00005809271,0.00011355545,0.0003348451,0.0002869011,0.0020727385],"category_scores_gemma":[0.00012914317,0.00021540526,0.00009095465,0.00008084117,0.00024248606,0.00015837562,0.00025564857,0.00011474732,0.00022375205],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000077677076,0.0000126742625,0.00016229699,0.0002857984,0.00003323787,0.0000010833317,0.00021892194,1.7209338e-7,0.98774153,0.008273886,0.0030562263,0.0001364788],"study_design_scores_gemma":[0.00014629606,0.00006959006,0.00008116491,0.000240338,0.00003652917,0.0000033619135,0.00001640543,5.0436756e-7,0.91955924,0.0033816071,0.07625349,0.00021148441],"about_ca_topic_score_codex":0.00013760524,"about_ca_topic_score_gemma":0.000012902909,"teacher_disagreement_score":0.11067807,"about_ca_system_score_codex":0.00014305531,"about_ca_system_score_gemma":0.00002853337,"threshold_uncertainty_score":0.9988395},"labels":[],"label_agreement":null},{"id":"W4396652810","doi":"10.1016/j.chemosphere.2024.142171","title":"Evaluation of surfactant-aided polycyclic aromatic hydrocarbon biodegradation by molecular docking and molecular dynamic simulation in the marine environment","year":2024,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Fisheries and Oceans Canada; Memorial University of Newfoundland","funders":"Natural Resources Canada; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Biodegradation; Polycyclic aromatic hydrocarbon; Environmental chemistry; Hydrocarbon; Docking (animal); Chemistry; Pulmonary surfactant; Organic chemistry","score_opus":0.00827282706792136,"score_gpt":0.23948677567406945,"score_spread":0.23121394860614808,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396652810","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972528,0.00060726167,0.00035608403,0.00034759325,0.00003806276,0.00040603953,0.0000047209223,0.000017176528,0.0009702249],"genre_scores_gemma":[0.999551,0.00006154364,0.00019901234,0.00008469469,0.0000029672774,0.0000072722546,0.00006545321,0.00001164383,0.000016443566],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99853593,0.00014799407,0.0002697584,0.0002762121,0.00062865514,0.00014142023],"domain_scores_gemma":[0.9996513,0.000049287275,0.000080657526,0.00018603557,0.0000026689386,0.000030018282],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00083135784,0.0001337512,0.00011125432,0.000015057252,0.000027982978,0.000039537,0.00011110251,0.00007347899,0.00042144794],"category_scores_gemma":[0.000043803437,0.0001043671,0.000035193778,0.00023039494,0.00007203312,0.00012323537,0.00005777209,0.000088441266,0.000036874117],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005949198,0.000051465708,0.0028782622,0.000018575587,0.00001359387,0.0000033742313,0.00030808165,0.010543514,0.9346883,0.0000032416556,0.000041168663,0.05144446],"study_design_scores_gemma":[0.00046853145,0.000037091497,0.017294077,0.00004539038,0.00009788515,0.0000033848153,0.00013031776,0.81082654,0.16930813,0.001293967,0.00030196624,0.00019271938],"about_ca_topic_score_codex":0.00013439781,"about_ca_topic_score_gemma":0.00004675853,"teacher_disagreement_score":0.800283,"about_ca_system_score_codex":0.00021645587,"about_ca_system_score_gemma":0.000011664798,"threshold_uncertainty_score":0.46145594},"labels":[],"label_agreement":null},{"id":"W4399011173","doi":"10.1029/2023jg007874","title":"Bioremediation of Crude Oil Contaminated Saline Soil Using a Bacterial Consortium and Different Carriers","year":2024,"lang":"en","type":"article","venue":"Journal of Geophysical Research Biogeosciences","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge","funders":"Shahid Chamran University of Ahvaz; Agricultural Sciences and Natural Resources University of Khuzestan","keywords":"Bioremediation; Crude oil; Contamination; Environmental science; Soil contamination; Saline; Environmental chemistry; Soil salinity; Waste management; Chemistry; Petroleum engineering; Soil science; Geology; Soil water; Biology; Engineering; Ecology","score_opus":0.035363249160962916,"score_gpt":0.3212087031063954,"score_spread":0.2858454539454325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399011173","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99866915,0.000116666575,0.000027501952,0.00050854235,0.00048703345,0.000055698358,0.000043808348,0.000006166811,0.00008546349],"genre_scores_gemma":[0.9992222,0.00035004658,0.00013426425,0.000020110583,0.00017600133,4.7067408e-7,0.000002655291,0.000005073618,0.000089187255],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977332,0.00019955965,0.00042952463,0.00022056629,0.0011051438,0.00031201754],"domain_scores_gemma":[0.99914676,0.0002606761,0.00016521878,0.00008229247,0.00010870811,0.0002363172],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012879643,0.00010758907,0.0002310104,0.00019813718,0.00011481974,0.00012595045,0.00025355417,0.00006664787,0.0003006635],"category_scores_gemma":[0.0004307559,0.00006862772,0.00008209156,0.0007496459,0.0013226223,0.00033570756,0.00015684034,0.0002464012,0.000014679837],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007119255,0.000074809,0.013430797,0.00002421604,0.000011888268,0.000013191626,0.00029956264,0.000001020078,0.9744136,0.000030489977,0.00019145165,0.011437828],"study_design_scores_gemma":[0.0007993081,0.0012735231,0.25169247,0.0002733832,0.000047599984,0.00003751684,0.00081747747,0.0064275926,0.7339799,0.00050337054,0.0038805457,0.00026729595],"about_ca_topic_score_codex":0.0019296623,"about_ca_topic_score_gemma":0.00017452467,"teacher_disagreement_score":0.24043365,"about_ca_system_score_codex":0.00012272084,"about_ca_system_score_gemma":0.00014038316,"threshold_uncertainty_score":0.4873257},"labels":[],"label_agreement":null},{"id":"W4399142618","doi":"10.1016/j.chemosphere.2024.142490","title":"New perspectives on the anaerobic degradation of BTEX: Mechanisms, pathways, and intermediates","year":2024,"lang":"en","type":"article","venue":"Chemosphere","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"BTEX; Ethylbenzene; Chemistry; Biodegradation; Environmental chemistry; Bioremediation; Toluene; Microbial biodegradation; Benzene; Xylene; Organic chemistry; Microorganism; Contamination; Ecology; Biology; Bacteria","score_opus":0.009638283329789788,"score_gpt":0.19798955355408832,"score_spread":0.18835127022429854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399142618","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99476504,0.00037180938,0.0003093163,0.0011262788,0.00011509295,0.00012020857,0.000009610721,0.000035407425,0.003147231],"genre_scores_gemma":[0.99717647,0.00017446505,0.0012318385,0.00011504444,0.000020610727,0.0000010121755,0.0000042515553,0.0000062883637,0.0012699923],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99953854,0.000013984527,0.00008774439,0.00017267547,0.00010686167,0.00008016661],"domain_scores_gemma":[0.9997903,0.00004156259,0.000027260168,0.00009809533,0.0000037196078,0.000039039438],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009004203,0.00007414129,0.00005993284,0.0000042611996,0.00003063655,0.000030410825,0.00009050427,0.00003814808,0.0047511403],"category_scores_gemma":[0.00002817543,0.00004552111,0.00002519519,0.00012110504,0.00007153312,0.000065977634,0.000049148086,0.00006505685,0.0001916069],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011302824,0.000024099338,0.000553343,0.00001462319,0.000012859545,0.0000017634708,0.002130343,0.0000026966459,0.92966014,0.0061698267,0.024630452,0.036788538],"study_design_scores_gemma":[0.00018940488,0.00012332204,0.0107688205,0.00007904907,0.000017336362,0.0000038040184,0.004558008,0.0004446162,0.9742919,0.0029812285,0.006356525,0.00018597762],"about_ca_topic_score_codex":0.00006421477,"about_ca_topic_score_gemma":0.000052172447,"teacher_disagreement_score":0.044631757,"about_ca_system_score_codex":0.000044185163,"about_ca_system_score_gemma":0.000011779865,"threshold_uncertainty_score":0.99615866},"labels":[],"label_agreement":null},{"id":"W4399355272","doi":"10.3389/fbioe.2024.1433035","title":"Editorial: Microbial biosurfactants: updates on their biosynthesis, production and applications","year":2024,"lang":"en","type":"editorial","venue":"Frontiers in Bioengineering and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Biosynthesis; Production (economics); Biochemical engineering; Biotechnology; Chemistry; Biology; Engineering; Biochemistry; Economics","score_opus":0.002790409173517453,"score_gpt":0.18394350463176945,"score_spread":0.181153095458252,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399355272","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004600525,0.0013621949,0.00018701005,0.0013198147,0.99117905,0.0005188138,0.0004569952,0.00034613372,0.000029436518],"genre_scores_gemma":[0.016388912,0.022232356,0.0032098514,0.000046592257,0.9572911,0.00007133871,0.00027822112,0.00012369701,0.00035790724],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99811506,0.000026630247,0.0003352932,0.00092438905,0.00021488695,0.00038373054],"domain_scores_gemma":[0.9994352,0.000054753702,0.00009813018,0.0003249032,0.000012605229,0.0000744505],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00029047634,0.00042447104,0.00040944215,0.000402667,0.00008095866,0.000074563,0.00027263965,0.0018494672,0.000017709564],"category_scores_gemma":[0.00021530064,0.00035715336,0.000045734996,0.0005069948,0.00042576174,0.00007052894,0.00023819033,0.00094687357,0.000061008835],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020586032,0.0000344814,0.00011276225,0.00007803637,0.00002813429,0.0000015839895,0.000027379881,0.000013373199,0.060661472,0.0000073434476,0.93056595,0.008448898],"study_design_scores_gemma":[0.00012764125,0.00007375024,0.000024300281,0.00013915489,0.000024539675,0.0000031809561,0.00004646995,0.00007599287,0.027386434,0.00008521487,0.9716224,0.00039093307],"about_ca_topic_score_codex":0.000047939775,"about_ca_topic_score_gemma":0.000037609996,"teacher_disagreement_score":0.04105644,"about_ca_system_score_codex":0.00022183245,"about_ca_system_score_gemma":0.000022836877,"threshold_uncertainty_score":0.99988806},"labels":[],"label_agreement":null},{"id":"W4399570648","doi":"10.2139/ssrn.4863125","title":"Taxis-Enhanced Mineralization and Cometabolism of Pahs by Bacteria in Micrometer-Scale Environments","year":2024,"lang":"en","type":"preprint","venue":"SSRN Electronic Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Cometabolism; Taxis; Mineralization (soil science); Environmental chemistry; Chemistry; Environmental science; Bacteria; Biology; Organic chemistry; Bioremediation; Botany","score_opus":0.003362723635741561,"score_gpt":0.19960088687179087,"score_spread":0.1962381632360493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399570648","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99621403,0.0021671515,0.00046070386,0.00020598891,0.00034457794,0.00022641044,0.000098793855,0.000008226515,0.00027409312],"genre_scores_gemma":[0.9831998,0.014841188,0.00020479284,0.000061511695,0.0000474435,0.000003716233,0.00008574827,0.00002500493,0.0015308381],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99779266,0.00013376241,0.0005169009,0.0003891964,0.0002675496,0.0008999011],"domain_scores_gemma":[0.99941754,0.000013081414,0.00032167934,0.00016235912,0.000004769932,0.00008054721],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009027779,0.000251233,0.00033321136,0.000117066746,0.000036630197,0.000056896504,0.00026133112,0.000232998,0.00048429615],"category_scores_gemma":[0.000015120328,0.00022553663,0.00008037073,0.00016774454,0.00012268615,0.000083107094,0.00049614237,0.0013834798,0.00006751139],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024933699,0.000082654755,0.0050531826,0.000023488497,0.000040131945,8.64568e-7,0.00021205522,0.00002126887,0.9889377,0.000050533887,0.0005097142,0.0050434936],"study_design_scores_gemma":[0.0064170584,0.0009362534,0.112471156,0.00087299757,0.0005141271,0.00032547256,0.0016875458,0.00096241274,0.7267185,0.1086862,0.03692923,0.0034790698],"about_ca_topic_score_codex":0.00029634728,"about_ca_topic_score_gemma":0.00149821,"teacher_disagreement_score":0.26221922,"about_ca_system_score_codex":0.00093674543,"about_ca_system_score_gemma":0.00011982092,"threshold_uncertainty_score":0.9197117},"labels":[],"label_agreement":null},{"id":"W4399999698","doi":"10.2139/ssrn.4876119","title":"Development of Biosurfactant-Aided Dispersants: Formation Strategy and Mechanism Exploration","year":2024,"lang":"en","type":"preprint","venue":"SSRN Electronic Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland; Government of Canada; Fisheries and Oceans Canada","funders":"","keywords":"Mechanism (biology); Dispersant; Biochemical engineering; Chemistry; Process management; Business; Computer science; Petroleum engineering; Engineering; Epistemology; Physics; Philosophy; Dispersion (optics)","score_opus":0.01780480510448447,"score_gpt":0.23653051813550988,"score_spread":0.2187257130310254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399999698","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915481,0.0005627797,0.0061176904,0.00031687395,0.00033418555,0.00029897128,0.00002275313,0.00003269419,0.00076594594],"genre_scores_gemma":[0.9944929,0.003873439,0.0012138075,0.000021834858,0.000048331818,0.0000037816933,0.000048813705,0.00001937389,0.0002777159],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9977974,0.00006158555,0.0006202075,0.0002935337,0.0003930062,0.0008342338],"domain_scores_gemma":[0.99934846,0.000009334131,0.0004048185,0.00012879909,0.000023885706,0.0000846713],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012336574,0.00024290364,0.00023157583,0.000099709,0.00012192756,0.0001021946,0.00021063746,0.00020821785,0.0002443003],"category_scores_gemma":[0.000017066168,0.00020042466,0.000075627395,0.00012808373,0.00005602536,0.00028329712,0.00041861125,0.0013345045,0.00013158735],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010728047,0.0001636567,0.0002770518,0.00024804083,0.00031027166,0.000005921809,0.0065356214,0.00031290407,0.79503256,0.023558356,0.0003079116,0.17314044],"study_design_scores_gemma":[0.001164708,0.00038067147,0.0010911182,0.0005005966,0.00021732651,0.00022139835,0.010283803,0.004148601,0.20824268,0.77040714,0.002075169,0.0012667748],"about_ca_topic_score_codex":0.00004378712,"about_ca_topic_score_gemma":0.0016881655,"teacher_disagreement_score":0.74684876,"about_ca_system_score_codex":0.0012128159,"about_ca_system_score_gemma":0.0006997493,"threshold_uncertainty_score":0.817308},"labels":[],"label_agreement":null},{"id":"W4400006633","doi":"10.1007/s00449-024-03051-y","title":"Enhanced low-cost lipopeptide biosurfactant production by Bacillus velezensis from residual glycerin","year":2024,"lang":"en","type":"article","venue":"Bioprocess and Biosystems Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Canada Foundation for Innovation","keywords":"Surfactin; Industrial and production engineering; Bioremediation; Aeration; Chemistry; Bioreactor; Bioprocess; Substrate (aquarium); Central composite design; Lipopeptide; Chromatography; Food science; Response surface methodology; Pulp and paper industry; Bacteria; Chemical engineering; Bacillus subtilis; Biology; Organic chemistry","score_opus":0.004456275856658905,"score_gpt":0.18179146125114107,"score_spread":0.17733518539448218,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400006633","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963925,0.0010937084,0.00032310904,0.00024598444,0.0010136676,0.00030495747,0.00021976381,0.0002614337,0.00014489329],"genre_scores_gemma":[0.9986126,0.00033406587,0.00019798276,0.000028902532,0.0002522963,0.000013324549,0.00006416702,0.000029624673,0.00046703892],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99851793,0.000012557543,0.0003109197,0.00059503503,0.0002544389,0.00030909514],"domain_scores_gemma":[0.9996064,0.000019967812,0.00005184694,0.0001670623,0.000013536917,0.0001412365],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017018651,0.00025236647,0.00020246647,0.00005371229,0.00007749676,0.0001747424,0.00013111669,0.00013429919,0.000249969],"category_scores_gemma":[0.00003583971,0.00020593467,0.00003814682,0.0003731297,0.000048627353,0.00025488724,0.00008332303,0.00012592536,0.0002730056],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000127427,0.000015789423,0.0002923791,0.00014742515,0.000019925092,0.0000052332352,0.00020152764,0.000069380585,0.9891038,0.00000338192,0.0021754648,0.00795296],"study_design_scores_gemma":[0.00016538029,0.000030207388,0.001938465,0.0003065467,0.00001791293,0.000012382466,0.000087120425,0.0021178902,0.95816857,0.0000019664164,0.03674682,0.00040672152],"about_ca_topic_score_codex":0.0005141254,"about_ca_topic_score_gemma":0.00009468316,"teacher_disagreement_score":0.034571353,"about_ca_system_score_codex":0.00012277938,"about_ca_system_score_gemma":0.000012397949,"threshold_uncertainty_score":0.83977723},"labels":[],"label_agreement":null},{"id":"W4400301165","doi":"10.19080/ijesnr.2024.33.556367","title":"Laboratory Evaluation of the Efficacy of Chlorine Dioxide (ClO2) Composite Powder for Remediation of Petroleum Hydrocarbon-Contaminated Soils","year":2024,"lang":"en","type":"article","venue":"International Journal of Environmental Sciences & Natural Resources","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Royal University","funders":"","keywords":"Chlorine dioxide; Environmental remediation; Hydrocarbon; Contamination; Soil water; Petroleum; Environmental science; Soil contamination; Environmental chemistry; Waste management; Chemistry; Organic chemistry; Engineering; Soil science; Biology","score_opus":0.009906809576003392,"score_gpt":0.257793211056148,"score_spread":0.2478864014801446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400301165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973342,0.0007832503,0.000012128824,0.00043672667,0.000949431,0.00018739139,0.00008947498,0.0000035144362,0.00020390873],"genre_scores_gemma":[0.9995316,0.00008101669,0.0001766088,0.000045746292,0.000099197074,0.0000012536832,0.000006685811,0.0000059165245,0.000051936233],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971193,0.00011341558,0.000640741,0.00017679423,0.0018208389,0.000128928],"domain_scores_gemma":[0.99884397,0.00022738475,0.000732604,0.000089922876,0.000061301085,0.00004481431],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014752344,0.000115714654,0.00018117558,0.00012702768,0.000050843293,0.000023941326,0.00065643416,0.000052302792,0.00027615606],"category_scores_gemma":[0.00021006746,0.00007413646,0.00017894409,0.00025336625,0.000604411,0.00031939725,0.0001336524,0.00012842889,0.0000038680664],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012000427,0.00010986087,0.026588598,0.000008480973,0.000061130864,8.342403e-7,0.00047725905,0.0019799015,0.96462286,0.000015875321,0.000090613095,0.005924592],"study_design_scores_gemma":[0.00093197374,0.00020432136,0.43677172,0.00015169507,0.000089660905,0.000009769662,0.00022430901,0.00644243,0.5535347,0.00010647012,0.001428613,0.000104325576],"about_ca_topic_score_codex":0.00003812705,"about_ca_topic_score_gemma":0.00002230357,"teacher_disagreement_score":0.41108814,"about_ca_system_score_codex":0.00026986768,"about_ca_system_score_gemma":0.000047643123,"threshold_uncertainty_score":0.30237153},"labels":[],"label_agreement":null},{"id":"W4400320189","doi":"10.1099/acmi.0.000695.v4","title":"The relationship between microbial population ATP and quantitative PCR bioburdens in diesel fuel microcosms","year":2024,"lang":"en","type":"article","venue":"Access Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"LuminUltra Technologies (Canada)","funders":"Battelle","keywords":"Microcosm; Diesel fuel; Population; Environmental science; Biology; Environmental chemistry; Chemistry; Microbiology; Environmental health; Medicine; Organic chemistry","score_opus":0.047509577751754586,"score_gpt":0.3174823998212522,"score_spread":0.26997282206949763,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400320189","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99574286,0.00065189425,0.000046933983,0.002478851,0.00036423016,0.00032378046,0.00010443829,0.000050350554,0.00023664483],"genre_scores_gemma":[0.99881107,0.00014751556,0.00020709437,0.00020437875,0.000054644523,0.0000068560894,0.00016753074,0.000015044571,0.0003858644],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986458,0.00016185943,0.00037164538,0.0004360719,0.00004960627,0.00033504702],"domain_scores_gemma":[0.9989654,0.00073597446,0.00008395164,0.00015502497,0.000008922845,0.000050758594],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041283623,0.0001746083,0.000172274,0.00008998742,0.00020782423,0.00018115429,0.00031334528,0.00018080676,0.00017315093],"category_scores_gemma":[0.00014456104,0.00012445709,0.0000457411,0.00041892147,0.0003692306,0.00028108462,0.0003076105,0.00024690197,0.00042279094],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021328698,0.000010623533,0.7354413,0.000016498501,0.000010953905,0.0000034731045,0.00052325294,0.000004837338,0.2593459,0.00035130206,0.0027106947,0.0015598394],"study_design_scores_gemma":[0.00025041128,0.000038725524,0.96396416,0.000032647768,0.000014169571,0.000015304275,0.00006759451,0.000022296366,0.0026359032,0.0011465369,0.031606644,0.0002056134],"about_ca_topic_score_codex":0.00065377605,"about_ca_topic_score_gemma":0.0034382257,"teacher_disagreement_score":0.25670996,"about_ca_system_score_codex":0.00014111762,"about_ca_system_score_gemma":0.000014374431,"threshold_uncertainty_score":0.54342633},"labels":[],"label_agreement":null},{"id":"W4400592859","doi":"10.1002/jeq2.20594","title":"Do phosphorus amendments enhance biodegradation activity in stalled petroleum hydrocarbon‐contaminated soil?","year":2024,"lang":"en","type":"article","venue":"Journal of Environmental Quality","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan","funders":"Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada","keywords":"Bioremediation; Environmental chemistry; Biodegradation; Bioavailability; Phosphorus; Calcareous; Microcosm; Soil water; Amendment; Chemistry; Soil contamination; Phosphate; Soil pH; Degradation (telecommunications); Benzene; Microbial consortium; Hydrocarbon; Environmental engineering; Environmental science; Contamination; Soil science; Microorganism; Ecology; Botany; Geology; Biology; Bacteria","score_opus":0.012199004950561886,"score_gpt":0.26919329240997103,"score_spread":0.25699428745940917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400592859","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979968,0.00035221275,0.00012835037,0.0002882531,0.00039276673,0.00014237729,0.000056960434,0.000015570418,0.00062671455],"genre_scores_gemma":[0.9987537,0.0005461506,0.0001205606,0.00010330448,0.000040823325,0.0000018791195,0.000009304746,0.000014932177,0.00040934744],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977931,0.00023987485,0.00069227023,0.00032988781,0.0006595538,0.00028531568],"domain_scores_gemma":[0.999248,0.00007086316,0.0003593995,0.00017610534,0.0000025378924,0.00014306667],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011894446,0.00021126603,0.00029552984,0.00009164724,0.000050852355,0.00006772818,0.00022885847,0.00011326481,0.0023020178],"category_scores_gemma":[0.000029692023,0.00017876945,0.00014656207,0.00020259513,0.00015131057,0.0005838632,0.00011723765,0.00036556865,0.00032409336],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016750123,0.00043355595,0.04140061,0.00001273102,0.000030004572,0.000051007257,0.0003438973,0.00008408658,0.9395898,0.0000058750884,0.00029369484,0.01758725],"study_design_scores_gemma":[0.0011353163,0.0002946616,0.59947115,0.00009186342,0.00003323543,0.000028066514,0.00033731395,0.00072562107,0.39106873,0.00015774908,0.0062487097,0.00040760258],"about_ca_topic_score_codex":0.0001575988,"about_ca_topic_score_gemma":0.00009416717,"teacher_disagreement_score":0.55807054,"about_ca_system_score_codex":0.0010809491,"about_ca_system_score_gemma":0.000021028614,"threshold_uncertainty_score":0.99861},"labels":[],"label_agreement":null},{"id":"W4400837237","doi":"10.5376/gab.2024.15.0009","title":"Beyond Traditional Bioremediation: The Potential of Engineered SynComs in Tackling Complex Environmental Pollutants","year":2024,"lang":"en","type":"article","venue":"Genomics and Applied Biology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Bioremediation; Pollutant; Biochemical engineering; Environmental chemistry; Environmental science; Chemistry; Engineering; Biology; Ecology; Contamination","score_opus":0.009849827514997585,"score_gpt":0.18995659818351748,"score_spread":0.1801067706685199,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400837237","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99764705,0.00012908177,0.0001469281,0.00042289752,0.00017048071,0.00015045171,0.00047698102,0.000008989334,0.0008471282],"genre_scores_gemma":[0.9990527,0.00022130068,0.0003577383,0.00018058442,0.00007904292,0.0000028525078,0.000086280044,0.0000058940636,0.000013633386],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999384,0.000015435548,0.00020082245,0.00019645947,0.00006079766,0.00014248426],"domain_scores_gemma":[0.99983215,0.000031487947,0.00003650281,0.000065938046,6.3643546e-7,0.000033311022],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014517816,0.00008931355,0.00010426382,0.00003301987,0.00004416519,0.000013487262,0.000097795266,0.00007264992,0.0009533302],"category_scores_gemma":[0.000001701326,0.00006413239,0.000026247766,0.0000832752,0.00023336864,0.000019797415,0.0000682822,0.00008187204,0.000052146857],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011891913,0.000020786152,0.0006664739,0.0000033942574,0.000008641411,0.0000010504668,0.00013934493,0.00019591385,0.9792077,0.001726772,0.00008659365,0.017931415],"study_design_scores_gemma":[0.0019947945,0.00022293125,0.8317988,0.000016338417,0.00006064477,0.000071993345,0.00080208306,0.026935605,0.096678704,0.019242607,0.021339387,0.0008361045],"about_ca_topic_score_codex":0.0000072196844,"about_ca_topic_score_gemma":0.00001375425,"teacher_disagreement_score":0.882529,"about_ca_system_score_codex":0.00005432392,"about_ca_system_score_gemma":0.000008181172,"threshold_uncertainty_score":0.99995995},"labels":[],"label_agreement":null},{"id":"W4400879731","doi":"10.2139/ssrn.4901401","title":"Decades of Petroleum Extraction: Longitudinal Study on the Long-Term Effects of Oil Acquisition on Soil Microbial Communities and Physicochemical Properties","year":2024,"lang":"en","type":"preprint","venue":"SSRN Electronic Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Northern British Columbia","funders":"","keywords":"Extraction (chemistry); Term (time); Petroleum; Environmental science; Pulp and paper industry; Chemistry; Environmental chemistry; Engineering; Chromatography; Organic chemistry; Physics","score_opus":0.016991232852347674,"score_gpt":0.25237198976890746,"score_spread":0.2353807569165598,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400879731","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979935,0.0007690627,0.000011737782,0.0005655307,0.00027384458,0.0002110485,0.000011782412,0.000014616834,0.00014885375],"genre_scores_gemma":[0.9980791,0.0014117655,0.0000032299804,0.000047768914,0.00016723186,0.000009032611,0.000007545081,0.000021081025,0.00025325076],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980646,0.00027336186,0.00035643202,0.0002538946,0.0004473448,0.0006043822],"domain_scores_gemma":[0.99918073,0.00012040015,0.0003621524,0.00026377596,0.000027435666,0.0000454977],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00079036504,0.00028641344,0.00032929244,0.000081329505,0.00016234143,0.00007982172,0.00037982795,0.00014744728,0.00007477531],"category_scores_gemma":[0.00001741858,0.0001837604,0.00015391005,0.00008782844,0.00034278136,0.000059530677,0.00044950837,0.0025914935,0.000027156848],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00062816264,0.0013056856,0.02470329,0.00039238055,0.0005046757,0.000009055337,0.002400609,0.00013269868,0.9650569,0.0003559921,0.00027659172,0.0042339345],"study_design_scores_gemma":[0.0018826685,0.0037972755,0.1374951,0.0023485646,0.0006229573,0.0002387763,0.0050249356,0.000067909656,0.8433372,0.0043726857,0.000018777511,0.0007931855],"about_ca_topic_score_codex":0.00015309556,"about_ca_topic_score_gemma":0.00073717895,"teacher_disagreement_score":0.121719755,"about_ca_system_score_codex":0.00057399966,"about_ca_system_score_gemma":0.000195878,"threshold_uncertainty_score":0.99970955},"labels":[],"label_agreement":null},{"id":"W4400928959","doi":"10.1002/cjce.25419","title":"Generation of biosurfactants by <i>P. aeruginosa gi</i> | <scp>KP163922</scp> | on waste engine oil in a free and immobilized cells system","year":2024,"lang":"en","type":"article","venue":"The Canadian Journal of Chemical Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Laboratory flask; Biodegradation; Chemistry; Erlenmeyer flask; Fourier transform infrared spectroscopy; Substrate (aquarium); Rhamnolipid; Chromatography; Biofilm; Nuclear chemistry; Bacteria; Chemical engineering; Organic chemistry; Pseudomonas aeruginosa","score_opus":0.007169814687586479,"score_gpt":0.16714711074499433,"score_spread":0.15997729605740785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400928959","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99798054,0.0010406413,0.000021188565,0.00028662276,0.00038663967,0.000048951406,0.000065678825,0.000008764682,0.00016096345],"genre_scores_gemma":[0.99961466,0.000035001387,0.00014541058,0.00004712377,0.000077751945,7.077412e-7,0.000002835521,0.00001328445,0.00006320657],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991167,0.0000200864,0.00033107615,0.00011849723,0.00018769554,0.00022593899],"domain_scores_gemma":[0.9994745,0.000090283116,0.00006871928,0.00011491995,0.000011376034,0.00024018966],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000360793,0.00012328483,0.00017497866,0.000083350205,0.000020152984,0.000050864404,0.00020089222,0.000086198794,0.00003321728],"category_scores_gemma":[0.00009354297,0.00009236855,0.000046861565,0.0002489971,0.00006343648,0.00009543362,0.000021400983,0.00023660227,0.000008577186],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000020737903,0.0000054521897,0.000052171443,0.00004862218,0.000010662056,0.000019932211,0.00018109483,0.0031012318,0.99093485,0.00001570657,0.005027456,0.0006007229],"study_design_scores_gemma":[0.0003023897,0.000028715986,0.000023776138,0.00021609626,0.000012952999,0.00004278025,0.00003094262,0.016710749,0.97929907,0.000002806466,0.0032704354,0.00005928129],"about_ca_topic_score_codex":0.0007433877,"about_ca_topic_score_gemma":0.00026657752,"teacher_disagreement_score":0.013609516,"about_ca_system_score_codex":0.00029319566,"about_ca_system_score_gemma":0.000059945018,"threshold_uncertainty_score":0.37666804},"labels":[],"label_agreement":null},{"id":"W4401111236","doi":"10.1016/j.ibiod.2024.105861","title":"Harnessing microbial potentials by advancing bioremediation of PAHs through molecular insights and genetics","year":2024,"lang":"en","type":"article","venue":"International Biodeterioration & Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canada School of Energy and Environment; City University of Hong Kong","keywords":"Bioremediation; Microbial genetics; Biology; Computational biology; Biotechnology; Genetics; Biochemical engineering; Bacteria; Engineering","score_opus":0.006649739319475866,"score_gpt":0.2361248693202652,"score_spread":0.2294751300007893,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401111236","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9568183,0.00060245313,0.039464008,0.0012469989,0.0009740402,0.00024834325,0.00019585257,0.00007522675,0.00037482017],"genre_scores_gemma":[0.99258226,0.0004953281,0.0056562624,0.00026826575,0.000069204136,0.0000052684472,0.0008150721,0.000016426784,0.00009190994],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99846923,0.00007630625,0.0004971099,0.00040595507,0.00039593657,0.00015547611],"domain_scores_gemma":[0.9995236,0.00003373971,0.00020546063,0.00012389774,0.00005839954,0.000054919125],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022280282,0.00018021601,0.0001409048,0.00010581185,0.00007505747,0.00020224942,0.00015206257,0.00012587578,0.00045126953],"category_scores_gemma":[0.000054931355,0.00016750376,0.00005670734,0.00027809426,0.00014433495,0.0008227333,0.000088553614,0.00008205929,0.00009436004],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001731374,0.00003189546,0.0011027114,0.000016471913,0.0000189269,0.0000017853207,0.000341239,0.00004101734,0.9745066,0.000106129046,0.002088086,0.021727784],"study_design_scores_gemma":[0.00029020035,0.000054909837,0.0015501017,0.0000651656,0.000028379418,0.0000084550065,0.00006010069,0.009686747,0.95480967,0.00045054455,0.032753054,0.00024269159],"about_ca_topic_score_codex":0.00009685111,"about_ca_topic_score_gemma":0.00004743092,"teacher_disagreement_score":0.035764005,"about_ca_system_score_codex":0.0001464189,"about_ca_system_score_gemma":0.000027038112,"threshold_uncertainty_score":0.6830605},"labels":[],"label_agreement":null},{"id":"W4401126887","doi":"10.1007/978-3-031-58331-5_4","title":"Recent Advances in the Application of Biosurfactants in Wastewater Treatment","year":2024,"lang":"en","type":"book-chapter","venue":"Water science and technology library","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Environmental science; Wastewater; Biochemical engineering; Computer science; Engineering; Environmental engineering","score_opus":0.007073990142126941,"score_gpt":0.2042033866078849,"score_spread":0.19712939646575794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401126887","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6522292,0.0057484624,6.303597e-7,0.018406624,0.00026689054,0.0013317264,0.00006894817,0.00013008973,0.32181746],"genre_scores_gemma":[0.9680676,0.018323753,0.00011308303,0.00020109383,0.000012944997,0.0000203331,0.000024160703,0.000017003573,0.013220045],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99885005,0.000006537558,0.00025758392,0.0004402225,0.00022015268,0.00022548388],"domain_scores_gemma":[0.9996336,0.000008367677,0.00005516446,0.00027349612,0.0000047236736,0.00002466482],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020018738,0.00016350082,0.00017165045,0.00034261495,0.000040174767,0.000029586132,0.00045080483,0.00018926022,0.00028318685],"category_scores_gemma":[0.0000027188403,0.00008203803,0.00001677589,0.00037651765,0.0011060769,0.00042423405,0.00028767987,0.00014806651,0.00020882837],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049338374,0.00020462807,0.03792381,0.00007037895,0.000012676693,0.00009380863,0.0022533494,0.000006764101,0.344357,0.028933855,0.00045239797,0.585642],"study_design_scores_gemma":[0.00018283422,0.00014050968,0.0005608452,0.00005500888,0.0000074876,0.00001293175,0.0000868162,0.00004898823,0.17401387,0.030742979,0.7939475,0.00020023054],"about_ca_topic_score_codex":0.000006995887,"about_ca_topic_score_gemma":0.00007653092,"teacher_disagreement_score":0.7934951,"about_ca_system_score_codex":0.000068984256,"about_ca_system_score_gemma":0.000025848369,"threshold_uncertainty_score":0.40753865},"labels":[],"label_agreement":null},{"id":"W4401153365","doi":"10.1101/2024.07.29.605694","title":"Deciphering Reductive Dehalogenase Specificity Through Targeted Mutagenesis of Chloroalkane Reductases","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Chemistry; Dehalogenase; Active site; Residue (chemistry); Stereochemistry; Substrate (aquarium); Saturated mutagenesis; Enzyme; Biochemistry; Combinatorial chemistry; Mutant; Biology; Gene","score_opus":0.014891554711366065,"score_gpt":0.21705274568833446,"score_spread":0.20216119097696839,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401153365","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943388,0.0012667205,0.00011178506,0.00016712802,0.0018983161,0.0007210761,0.0010979796,0.00029372796,0.00010447637],"genre_scores_gemma":[0.99043113,0.0004866,0.008463744,0.00008946662,0.00035295883,0.0000380028,0.0000017427394,0.00011671537,0.000019667936],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964218,0.0001385056,0.00083028,0.0013949267,0.000607394,0.0006070603],"domain_scores_gemma":[0.9979146,0.000048540176,0.00053835526,0.0011308606,0.0001144025,0.00025321892],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00048372854,0.0006635085,0.0006822668,0.00012031393,0.00012700628,0.00011394139,0.0007136148,0.00053578813,0.0019797564],"category_scores_gemma":[0.00020484297,0.0006598746,0.00026998998,0.0008638335,0.00048682466,0.00016905577,0.001495749,0.0006527673,0.00067302934],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049180264,0.0001837469,0.0021689325,0.0002128438,0.00012589144,0.00007047796,0.000055309145,0.0002126796,0.9948679,0.000063709515,0.001983827,0.000005504184],"study_design_scores_gemma":[0.00020371281,0.00004155066,0.0345204,0.00022933767,0.00013402982,5.2873244e-8,0.000012932606,0.0000742734,0.9614712,0.0000148355775,0.002592615,0.00070508703],"about_ca_topic_score_codex":0.00046984607,"about_ca_topic_score_gemma":0.000018134364,"teacher_disagreement_score":0.033396725,"about_ca_system_score_codex":0.0006718902,"about_ca_system_score_gemma":0.00021378486,"threshold_uncertainty_score":0.9995853},"labels":[],"label_agreement":null},{"id":"W4401314251","doi":"10.1016/j.enmm.2024.100992","title":"Biodegradation of oily waste sludge using vermiremediation and composting process bioaugmentated with isolated hydrocarbon-degrading bacteria: Performance and ecotoxicity assessment","year":2024,"lang":"en","type":"article","venue":"Environmental Nanotechnology Monitoring & Management","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Arak University of Medical Sciences","keywords":"Biodegradation; Bioremediation; Ecotoxicity; Chemistry; Eisenia fetida; Total petroleum hydrocarbon; Environmental chemistry; Food science; Contamination; Toxicity; Biology; Ecology; Organic chemistry","score_opus":0.007171038025895932,"score_gpt":0.22143959683856493,"score_spread":0.21426855881266899,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401314251","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986259,0.000106260864,0.00033278897,0.00007871277,0.00020105571,0.00048204887,0.000012517827,0.000108879605,0.000051831536],"genre_scores_gemma":[0.996018,0.0005977293,0.003268184,0.000008599477,0.000020626483,0.000014066647,0.000025636758,0.00002327021,0.000023899505],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99856937,0.00002778529,0.00032352417,0.00050393824,0.00030011285,0.00027527797],"domain_scores_gemma":[0.9996044,0.000016797892,0.00015856882,0.00015763617,0.000002608266,0.00005997274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021356944,0.00024001165,0.00019227709,0.00018208365,0.00017143672,0.000053286407,0.0001301515,0.00012806311,0.000036105095],"category_scores_gemma":[0.0000019405668,0.00021630588,0.000019399218,0.0003314345,0.00030820497,0.0003685726,0.0002614575,0.00017869323,0.0000072304515],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003105868,0.00005587011,0.21132739,0.00012189689,0.000055216748,0.000010766627,0.00017665031,0.00022861152,0.76793164,0.0000047167773,0.0000020193083,0.020054176],"study_design_scores_gemma":[0.0008818435,0.00032459843,0.2014025,0.00036577063,0.00014168085,0.000030291925,0.0010209805,0.04440339,0.75086635,0.000022731827,0.00009894397,0.00044094154],"about_ca_topic_score_codex":0.00003232674,"about_ca_topic_score_gemma":0.0000033965337,"teacher_disagreement_score":0.044174775,"about_ca_system_score_codex":0.00035075488,"about_ca_system_score_gemma":0.000005335999,"threshold_uncertainty_score":0.8820698},"labels":[],"label_agreement":null},{"id":"W4401540628","doi":"10.1016/j.scitotenv.2024.175520","title":"Taxis-enhanced mineralization and co-metabolism of PAHs by bacteria in micrometer-scale environments","year":2024,"lang":"en","type":"article","venue":"The Science of The Total Environment","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Ministerio de Ciencia, Innovación y Universidades","keywords":"Taxis; Mineralization (soil science); Environmental chemistry; Microbial metabolism; Bacteria; Environmental science; Chemistry; Metabolism; Scale (ratio); Biology; Biochemistry; Botany; Geography; Organic chemistry; Paleontology; Nitrogen","score_opus":0.00427585666849735,"score_gpt":0.19483084705715764,"score_spread":0.19055499038866028,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401540628","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984023,0.00012811417,0.000043628854,0.00034838472,0.00015038264,0.00026900248,0.000062069485,0.0000043681284,0.0005917248],"genre_scores_gemma":[0.9983732,0.00019591957,0.00019072324,0.000027951417,0.000007727147,0.0000041365824,0.0000041173794,0.0000070839105,0.0011891226],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986553,0.0000765145,0.00028412516,0.00030670423,0.00046079265,0.00021652138],"domain_scores_gemma":[0.9995079,0.00002521575,0.000115038376,0.00029849174,0.0000010095349,0.000052354528],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006579138,0.00012569819,0.00013505814,0.000038925842,0.00008235248,0.000027542535,0.00040717577,0.000039010425,0.00088558724],"category_scores_gemma":[0.000014719174,0.00007353798,0.00004312812,0.00030441146,0.0016602975,0.00020542528,0.00034556375,0.00007919898,0.000076744],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007392856,0.000051423845,0.00030381614,0.0000057983493,0.0000030345548,1.15950556e-7,0.00048393468,0.00041858663,0.99746215,0.000010557172,0.00022938242,0.0010238265],"study_design_scores_gemma":[0.00015829688,0.000029312574,0.09075551,0.000020813235,0.000010902445,0.000002840866,0.00007928989,0.0007845469,0.9069777,0.00005053821,0.0010318495,0.00009836492],"about_ca_topic_score_codex":0.00012244182,"about_ca_topic_score_gemma":0.0000046620175,"teacher_disagreement_score":0.090484396,"about_ca_system_score_codex":0.00014621271,"about_ca_system_score_gemma":0.000009267685,"threshold_uncertainty_score":0.96965593},"labels":[],"label_agreement":null},{"id":"W4401928833","doi":"10.1016/j.envres.2024.119857","title":"Survival strategies and assembly mechanisms of microbial communities in petroleum-contaminated soils","year":2024,"lang":"en","type":"article","venue":"Environmental Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Soil water; Contamination; Petroleum; Soil contamination; Environmental science; Environmental chemistry; Microbial population biology; Ecology; Biology; Environmental protection; Chemistry; Bacteria","score_opus":0.03240501527233777,"score_gpt":0.2934467960381707,"score_spread":0.26104178076583295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401928833","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960637,0.00018306418,0.00006445441,0.00013073804,0.00008925107,0.00018151943,0.000053589054,0.000017363825,0.0032163132],"genre_scores_gemma":[0.9987782,0.0003482002,0.00011585585,0.000017086344,0.000011442291,0.000005775912,0.000036369194,0.000015074933,0.00067199714],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99831885,0.00031920717,0.00024568647,0.00024282915,0.0005017109,0.00037172966],"domain_scores_gemma":[0.9995263,0.00019241497,0.000024050916,0.00017518913,0.0000020418377,0.00007996011],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012099779,0.0001273775,0.00015456698,0.00013926195,0.000087998465,0.000119261895,0.0002366015,0.000092258946,0.0028638155],"category_scores_gemma":[0.000012194589,0.00011569621,0.00003340325,0.00020562664,0.00064943655,0.00034222807,0.00041325987,0.0003668147,0.00034191326],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003729085,0.000112213114,0.007796605,0.000027730022,0.0000091214215,0.000022958911,0.001100075,0.000030975258,0.9846062,0.000508668,0.00012475076,0.0056233965],"study_design_scores_gemma":[0.0016914112,0.00080528966,0.3861388,0.0002519182,0.000017405453,0.0000337454,0.04635329,0.0052737026,0.5463414,0.0064704814,0.005877403,0.000745151],"about_ca_topic_score_codex":0.0014105865,"about_ca_topic_score_gemma":0.0020472803,"teacher_disagreement_score":0.43826482,"about_ca_system_score_codex":0.00023129607,"about_ca_system_score_gemma":0.000023869405,"threshold_uncertainty_score":0.9980477},"labels":[],"label_agreement":null},{"id":"W4401951923","doi":"10.18280/ijdne.190405","title":"Hydrocarbon-Oxidizing Activity of the New Rhodococcus sp. Strain 1D/1 Promising for Cleaning the Environment from Oil Pollution","year":2024,"lang":"en","type":"article","venue":"International Journal of Design & Nature and Ecodynamics","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Oxidizing agent; Hydrocarbon; Pollution; Rhodococcus equi; Strain (injury); Environmental chemistry; Environmental science; Waste management; Chemistry; Biology; Engineering; Organic chemistry; Ecology; Biochemistry","score_opus":0.010899971914442181,"score_gpt":0.23474459286564528,"score_spread":0.2238446209512031,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401951923","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96542025,0.0004942112,0.02759622,0.0050127013,0.0011211997,0.00013618002,0.000094856994,0.000006553231,0.00011784738],"genre_scores_gemma":[0.99556637,0.00020652617,0.0037296785,0.00020383656,0.0001911974,4.8092653e-7,0.0000034101959,0.0000082891665,0.00009021819],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99912685,0.000056450495,0.00024774545,0.00012842385,0.00033860048,0.000101952595],"domain_scores_gemma":[0.99947274,0.00015326077,0.0002447937,0.00007241399,0.000013792365,0.000042982952],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045959177,0.000096669566,0.00010184654,0.000035721954,0.000065697044,0.000079106685,0.00030105386,0.00010373883,0.00006341004],"category_scores_gemma":[0.00006481937,0.000056633005,0.000106996464,0.000066481916,0.00006685049,0.00020103167,0.000078779354,0.00031776621,0.0000024101346],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011108275,0.000031478845,0.0004921095,0.0000056409194,0.00010909091,0.000005045451,0.0005105833,0.00297954,0.9184016,0.00011925614,0.00053371646,0.07670087],"study_design_scores_gemma":[0.0037165598,0.00056679896,0.13145141,0.0012833144,0.00056011236,0.0003254697,0.00075841515,0.36148536,0.4385721,0.026739065,0.03355468,0.0009867016],"about_ca_topic_score_codex":0.00003856606,"about_ca_topic_score_gemma":0.000043468168,"teacher_disagreement_score":0.47982946,"about_ca_system_score_codex":0.00019506489,"about_ca_system_score_gemma":0.000049353854,"threshold_uncertainty_score":0.2309427},"labels":[],"label_agreement":null},{"id":"W4402115737","doi":"10.2118/0924-0120-jpt","title":"Rhamnolipids Enhance Bioremediation of Petroleum-Contaminated Soil","year":2024,"lang":"en","type":"article","venue":"Journal of Petroleum Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Bioremediation; Petroleum; Environmental science; Contamination; Soil contamination; Waste management; Petroleum engineering; Environmental chemistry; Geology; Chemistry; Soil water; Engineering; Soil science; Ecology; Biology","score_opus":0.0037452681961201916,"score_gpt":0.22442344206714226,"score_spread":0.22067817387102207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402115737","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937886,0.000530638,0.0009506473,0.0026175145,0.00092073984,0.00004828963,0.000012797381,0.00007289456,0.0010578807],"genre_scores_gemma":[0.99825054,0.00033354893,0.0006365742,0.00006420177,0.0001136867,0.0000012229766,0.0000027034814,0.000015125488,0.0005824179],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99839973,0.00004129922,0.0006979171,0.00021022747,0.00038486745,0.00026595418],"domain_scores_gemma":[0.99919367,0.00004530104,0.00044235674,0.00019332148,0.000050794908,0.000074538315],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00049152883,0.00015807599,0.00031688943,0.00049990014,0.00003615791,0.000021933469,0.00040952174,0.00025557115,0.0010810582],"category_scores_gemma":[0.00013782976,0.00012662837,0.00013661032,0.000681505,0.00029165996,0.00023623256,0.00010643206,0.0004049412,0.0002709228],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037270005,0.000081200174,0.010874767,0.000023736256,0.00003937087,0.000039059778,0.00007890348,0.00010807556,0.96604043,0.00015189059,0.0037541115,0.018771157],"study_design_scores_gemma":[0.00066342024,0.00076533423,0.012071136,0.00013839715,0.00007158118,0.0002073942,0.00021201099,0.0017119856,0.9350131,0.00068817823,0.04820499,0.00025245742],"about_ca_topic_score_codex":0.000017625218,"about_ca_topic_score_gemma":0.000058223493,"teacher_disagreement_score":0.04445088,"about_ca_system_score_codex":0.00022608801,"about_ca_system_score_gemma":0.000056834684,"threshold_uncertainty_score":0.9998321},"labels":[],"label_agreement":null},{"id":"W4402827563","doi":"10.1016/j.jece.2024.114249","title":"Generation of oil spill dispersants composed of biosurfactants and chemical surfactants: Mechanism exploration through molecular dynamics simulation","year":2024,"lang":"en","type":"article","venue":"Journal of environmental chemical engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Fisheries and Oceans Canada; Memorial University of Newfoundland","funders":"Natural Resources Canada; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Dispersant; Mechanism (biology); Oil spill; Molecular dynamics; Biochemical engineering; Chemistry; Petroleum engineering; Chemical engineering; Nanotechnology; Materials science; Engineering; Computational chemistry; Dispersion (optics); Physics","score_opus":0.014653692376243121,"score_gpt":0.21661259572346359,"score_spread":0.20195890334722047,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402827563","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912822,0.00016775035,0.008174636,0.000052364026,0.000156309,0.000059644743,0.000058746085,0.000011092373,0.000037228794],"genre_scores_gemma":[0.9950579,0.0001672789,0.0046702554,0.000014283444,0.00003665277,4.084228e-7,0.000027278202,0.000020943053,0.0000050188323],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986408,0.000017059612,0.0006018994,0.00018431238,0.0004072426,0.00014873176],"domain_scores_gemma":[0.99954545,0.000050868322,0.00021533812,0.00009533775,0.000007742656,0.00008523327],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016198649,0.00017280619,0.00026199833,0.000046409463,0.000013541585,0.000017264014,0.00011243906,0.00012400972,0.000197755],"category_scores_gemma":[0.000041226984,0.00015586134,0.00009651929,0.00013131354,0.00008885835,0.00039777323,0.000077966426,0.00015676081,0.0000061520177],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024539759,0.000067052,0.00029961724,0.000049291306,0.00003283705,0.00000781663,0.00023284576,0.015447539,0.98224914,0.000047415422,0.0000042130473,0.0015376798],"study_design_scores_gemma":[0.00027654247,0.000048509028,0.00025416593,0.0000701372,0.000033015956,0.000013209533,0.000032896198,0.20881075,0.7902654,0.00004943712,0.000022127128,0.000123821],"about_ca_topic_score_codex":0.0000045340703,"about_ca_topic_score_gemma":3.618645e-7,"teacher_disagreement_score":0.1933632,"about_ca_system_score_codex":0.0003043268,"about_ca_system_score_gemma":0.000009449341,"threshold_uncertainty_score":0.6355841},"labels":[],"label_agreement":null},{"id":"W4403645975","doi":"10.1128/spectrum.01176-24","title":"Dynamics of microbial-induced oil degradation at the microscale","year":2024,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Petro-Canada","funders":"National Key Research and Development Program of China; PetroChina Company Limited; Chinese Academy of Sciences; National Natural Science Foundation of China","keywords":"Microscale chemistry; Degradation (telecommunications); Biofilm; Hexadecane; Bioremediation; Biodegradation; Chemistry; Environmental chemistry; Bioreactor; Chemical engineering; Environmental science; Environmental engineering; Contamination; Bacteria; Ecology; Biology; Organic chemistry; Computer science","score_opus":0.007029994332001938,"score_gpt":0.21037338078045256,"score_spread":0.20334338644845062,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403645975","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9903338,0.00015782022,0.00004605484,0.0060950997,0.0007618967,0.00010983717,0.00024662714,0.000054136846,0.0021947273],"genre_scores_gemma":[0.99241877,0.000097284115,0.00013677952,0.00038338453,0.000042393887,0.000002552644,0.00024247832,0.000018325289,0.006658028],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988118,0.00008751997,0.00032165804,0.00038614217,0.000058756385,0.00033415426],"domain_scores_gemma":[0.9995088,0.00006354264,0.00009353266,0.0002850166,0.0000056141243,0.000043509346],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00024140852,0.00017709302,0.00017687683,0.000045338347,0.00012106248,0.000025198353,0.00031422963,0.00013837864,0.00718399],"category_scores_gemma":[0.00001160479,0.00012014688,0.000114816015,0.0003172557,0.00028222174,0.000068580586,0.00026883563,0.00017437867,0.0033205824],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017545754,0.00002270175,0.0039226203,0.000011706202,0.000019006515,0.0000034216168,0.00008897097,0.000007116084,0.9836785,0.00010472181,0.008601369,0.0035223262],"study_design_scores_gemma":[0.00018707967,0.000050620038,0.002867225,0.000018763425,0.000025684436,0.00011261792,0.000044540087,0.0002618681,0.96667486,0.00008175316,0.02947663,0.00019835234],"about_ca_topic_score_codex":0.0013949192,"about_ca_topic_score_gemma":0.028947115,"teacher_disagreement_score":0.027552195,"about_ca_system_score_codex":0.00074201816,"about_ca_system_score_gemma":0.00004149301,"threshold_uncertainty_score":0.9974554},"labels":[],"label_agreement":null},{"id":"W4404538633","doi":"10.1080/10889868.2024.2427076","title":"A comprehensive review on the role of biosurfactants in remediation of heavy metals from contaminated environment","year":2024,"lang":"en","type":"review","venue":"Bioremediation Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Impact","funders":"","keywords":"Environmental remediation; Contamination; Heavy metals; Bioremediation; Environmental chemistry; Environmental science; Biochemical engineering; Waste management; Chemistry; Biology; Ecology; Engineering","score_opus":0.035423410266491526,"score_gpt":0.2794459862860009,"score_spread":0.24402257601950939,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404538633","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0024194226,0.9950946,0.000003519371,0.00025138367,0.0004575845,0.0011552912,0.00044530627,0.000010783816,0.00016211839],"genre_scores_gemma":[0.0056881453,0.9936829,0.000093137445,0.0001586418,0.00010374952,0.00001703942,0.00019768109,0.00003419211,0.000024483508],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99564946,0.0007240107,0.0019614464,0.00041561047,0.0009748982,0.0002745628],"domain_scores_gemma":[0.9970252,0.00039701536,0.0020184328,0.00039100603,0.000041540156,0.00012683378],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011143343,0.00044729808,0.0014346623,0.00022214121,0.000050909795,0.000027394472,0.0005158761,0.00028567304,0.002783009],"category_scores_gemma":[0.000253283,0.00026365163,0.00048312804,0.00068806444,0.00020149426,0.00011720829,0.00014227943,0.00062912505,0.0007672008],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006132981,0.00047462978,0.00049347803,0.0066602053,0.00047637458,0.000025997226,0.0005444014,0.000015551901,0.013569917,0.000036889418,0.009654785,0.96798646],"study_design_scores_gemma":[0.00031136375,0.00014747126,0.00073330646,0.01989361,0.0008592799,0.000013493923,0.00007771063,0.00004077752,0.0027911211,0.00014218589,0.9746151,0.0003745687],"about_ca_topic_score_codex":0.000048884485,"about_ca_topic_score_gemma":0.000013117254,"teacher_disagreement_score":0.96761185,"about_ca_system_score_codex":0.00044182944,"about_ca_system_score_gemma":0.000120669734,"threshold_uncertainty_score":0.9999816},"labels":[],"label_agreement":null},{"id":"W4404950115","doi":"10.1021/acs.est.4c07149","title":"Contrasting Kinetics of Highly Similar Chloroalkane Reductive Dehalogenases","year":2024,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Government of Ontario","keywords":"Dehalogenase; Chemistry; Dehalococcoides; Bioremediation; Reductive dechlorination; Enzyme; Substrate (aquarium); Chloroform; Active site; Biocatalysis; Environmental remediation; Vinyl chloride; Stereochemistry; Bacteria; Biochemistry; Catalysis; Organic chemistry; Biodegradation; Reaction mechanism; Contamination; Biology; Ecology","score_opus":0.005454700905580324,"score_gpt":0.20831693712932695,"score_spread":0.20286223622374663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404950115","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957243,0.00028667162,0.00016533278,0.0009875826,0.00026158537,0.0002021135,0.00004742902,0.00013332831,0.0021916148],"genre_scores_gemma":[0.9981501,0.00009329914,0.0014570194,0.00009578227,0.000023398454,0.0000048999404,0.0000056210856,0.000011710677,0.00015816298],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982931,0.000015018432,0.0002878835,0.00055661803,0.00042322924,0.00042415978],"domain_scores_gemma":[0.99952465,0.00003043531,0.00008485646,0.0002615506,0.000003144398,0.000095364776],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00024679524,0.00016658861,0.00016248829,0.0002401151,0.00011342485,0.000026197122,0.0005230732,0.00012319123,0.0016723193],"category_scores_gemma":[0.000069983624,0.00014333842,0.000047086847,0.001216757,0.004039004,0.00024617204,0.00041892004,0.00016357678,0.00054396474],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000046866116,0.00008211086,0.005223242,0.0000034272634,0.0000048459106,0.000013842645,0.0001157096,0.000047346406,0.9792729,0.00015190571,0.00020577392,0.01487423],"study_design_scores_gemma":[0.000107657936,0.00018021258,0.012500878,0.000017753138,0.000012841196,0.000039439292,0.00026479765,0.00028914376,0.9775266,0.00037154325,0.008517522,0.00017159677],"about_ca_topic_score_codex":0.000016796534,"about_ca_topic_score_gemma":0.000006831503,"teacher_disagreement_score":0.014702634,"about_ca_system_score_codex":0.00037594396,"about_ca_system_score_gemma":0.000015924697,"threshold_uncertainty_score":0.9992403},"labels":[],"label_agreement":null},{"id":"W4405098303","doi":"10.1016/j.ibiod.2024.105973","title":"Analysis of benzene, toluene, ethylbenzene, xylene(s) biodegradation under anoxic conditions using response surface methodology","year":2024,"lang":"en","type":"article","venue":"International Biodeterioration & Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Natural Sciences and Engineering Research Council of Canada; York University","keywords":"Ethylbenzene; Toluene; Benzene; Anoxic waters; Biodegradation; Environmental chemistry; Xylene; BTEX; Chemistry; Environmental science; Organic chemistry","score_opus":0.06306939707343888,"score_gpt":0.3411068892574712,"score_spread":0.2780374921840323,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405098303","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9534451,0.0001190703,0.0415056,0.0020646586,0.0011543734,0.00030529112,0.0010106028,0.00014669205,0.00024862256],"genre_scores_gemma":[0.98594385,0.00009136684,0.0110447975,0.00035555108,0.000059879818,0.000007941486,0.0020651899,0.00002602303,0.00040538993],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99676806,0.0005676174,0.00094389543,0.0007303157,0.0007068601,0.00028327882],"domain_scores_gemma":[0.99856573,0.00037984,0.00041511335,0.00036391156,0.00016231977,0.00011306666],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013482403,0.0003143673,0.0003764396,0.00080853095,0.00015991044,0.00021682707,0.00037319824,0.00027564738,0.004451612],"category_scores_gemma":[0.00020061398,0.00030330467,0.00028545636,0.0022965684,0.00022893095,0.0011120059,0.00012509723,0.00016534857,0.00027580475],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002179497,0.000083392035,0.0073238052,0.000009340172,0.00039858336,0.0000027622116,0.0002645022,0.011219318,0.977041,0.00053803023,0.0006036397,0.002297664],"study_design_scores_gemma":[0.00061989535,0.00019162206,0.119042315,0.00007414284,0.00096044946,0.00002177044,0.00034314248,0.26094106,0.6094191,0.0006770755,0.0069393553,0.00077005156],"about_ca_topic_score_codex":0.0005874277,"about_ca_topic_score_gemma":0.0005802055,"teacher_disagreement_score":0.3676219,"about_ca_system_score_codex":0.0005819983,"about_ca_system_score_gemma":0.000105076775,"threshold_uncertainty_score":0.9999419},"labels":[],"label_agreement":null},{"id":"W4405774597","doi":"10.1016/j.orggeochem.2024.104924","title":"Dissolved organic matter molecular composition controls potential biodegradability","year":2024,"lang":"en","type":"article","venue":"Organic Geochemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Scarborough Hospital; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Nuclear Waste Management Organization","keywords":"Biodegradation; Organic matter; Environmental chemistry; Dissolved organic carbon; Composition (language); Environmental science; Chemistry; Organic chemistry","score_opus":0.0024654026611120516,"score_gpt":0.18326283726106846,"score_spread":0.1807974345999564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405774597","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994774,0.00017727283,0.00078062667,0.0017387769,0.00020212123,0.00012978735,0.00005483867,0.00012190756,0.0020206904],"genre_scores_gemma":[0.99866706,0.000008992302,0.000132695,0.00041539775,0.000054703283,0.0000023534549,0.00013043835,0.000018576777,0.00056980597],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988539,0.000026890484,0.0002115052,0.00042016993,0.00023291438,0.00025462444],"domain_scores_gemma":[0.9995524,0.0000137998895,0.000038565267,0.00027019985,0.000009555728,0.00011544348],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00011840729,0.0001686688,0.00012874563,0.000011014001,0.000065885775,0.00010087757,0.00019191105,0.00013286683,0.073052004],"category_scores_gemma":[0.000014081563,0.00014968691,0.00008193573,0.00020287649,0.0001127483,0.00009092703,0.00012346654,0.00016072956,0.0052001253],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008409866,0.000051382216,0.0032018507,0.00002625371,0.000020048317,0.000025951955,0.000027773876,0.0000014449589,0.99085647,0.0000013757881,0.005551386,0.00022766354],"study_design_scores_gemma":[0.0001966897,0.000009693611,0.0074823387,0.00001549957,0.000044459335,0.000027200636,0.0000134802485,0.00025608583,0.9899668,0.0001059943,0.0016766599,0.00020506013],"about_ca_topic_score_codex":0.000021304402,"about_ca_topic_score_gemma":0.0000057025018,"teacher_disagreement_score":0.06785188,"about_ca_system_score_codex":0.00016375135,"about_ca_system_score_gemma":0.000021746355,"threshold_uncertainty_score":0.9955744},"labels":[],"label_agreement":null},{"id":"W4406392193","doi":"10.1016/s0967-0653(98)82336-3","title":"10.1016/s0967-0653(98)82336-3","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Degradation (telecommunications); Crude oil; Environmental science; Microbial biodegradation; Oil spill; Chemistry; Pulp and paper industry; Environmental chemistry; Petroleum engineering; Biology; Environmental engineering; Geology; Microorganism; Engineering; Bacteria","score_opus":0.004888810462803884,"score_gpt":0.16068769215114695,"score_spread":0.15579888168834308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406392193","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0046661575,0.000004699746,1.9330349e-7,0.00033334253,0.0000019148351,0.0001356207,0.000018034132,0.000067989036,0.9947721],"genre_scores_gemma":[0.0008072,3.437457e-7,0.0001237077,0.00017675002,0.000048061294,0.000002349748,0.000013526581,0.000010266275,0.9988178],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991988,0.000025425628,0.00013581806,0.00022178446,0.00018707334,0.00023108072],"domain_scores_gemma":[0.9996185,0.000011621473,0.000022723218,0.00018591632,0.0000039501847,0.0001573012],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000109538436,0.00010635512,0.00009482654,0.000017423836,0.00006231288,0.000027611539,0.00020519785,0.000054307966,0.9999333],"category_scores_gemma":[0.0000139350095,0.000093572,0.000037788956,0.00019048822,0.000052146333,0.00008859797,0.000058514674,0.000060132752,0.9999002],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023719587,0.000032540374,8.3100934e-7,6.8328137e-7,0.0000024216915,0.0000017344796,0.000016159702,0.000025960522,0.0030230952,5.974717e-8,0.6036576,0.3932152],"study_design_scores_gemma":[0.00014119272,0.000051474748,0.00024487262,0.0000030493866,0.0000042060356,0.0000023036632,5.3690553e-7,0.00004671561,0.0022061816,0.0000018082137,0.9971541,0.00014353277],"about_ca_topic_score_codex":0.000059570008,"about_ca_topic_score_gemma":0.0000022986628,"teacher_disagreement_score":0.39349654,"about_ca_system_score_codex":0.00006412417,"about_ca_system_score_gemma":0.0000052079295,"threshold_uncertainty_score":0.38157555},"labels":[],"label_agreement":null},{"id":"W4406492025","doi":"10.1016/0967-0653(93)95647-o","title":"10.1016/0967-0653(93)95647-o","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Bioremediation; Gulf war; Environmental science; Petroleum engineering; Oceanography; Geology; History; Ancient history; Paleontology","score_opus":0.004208544250066192,"score_gpt":0.15263376003351142,"score_spread":0.14842521578344522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406492025","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008925154,0.000005698883,2.3566096e-7,0.00030427022,0.000002136598,0.00013864167,0.000019535744,0.00006713061,0.9905372],"genre_scores_gemma":[0.0015813706,3.1601888e-7,0.00012287131,0.00019349664,0.000047100875,0.0000023911557,0.000016694185,0.000010192629,0.9980256],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99920136,0.000024820478,0.00013757299,0.00022503399,0.00017857517,0.00023263972],"domain_scores_gemma":[0.9996148,0.000011609827,0.000022722992,0.00018782647,0.0000037648483,0.00015928417],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00010837703,0.000106720494,0.00009155322,0.00001729617,0.00006371058,0.000028502303,0.0002076228,0.000054089258,0.99982774],"category_scores_gemma":[0.000012950986,0.00009438252,0.00003776814,0.0001851193,0.000051479343,0.00009428303,0.000058564638,0.000059111215,0.9996555],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024205565,0.000037232654,0.0000031378302,7.6893133e-7,0.0000026098485,0.0000019578163,0.000017015926,0.000034694658,0.0065196883,6.593524e-8,0.52461684,0.46874177],"study_design_scores_gemma":[0.00013280901,0.000051205127,0.00044866386,0.0000028264924,0.0000039937395,0.0000026475007,5.1266505e-7,0.000051900017,0.002066268,0.0000017533921,0.9970927,0.00014472088],"about_ca_topic_score_codex":0.000049933304,"about_ca_topic_score_gemma":0.0000018826364,"teacher_disagreement_score":0.47247583,"about_ca_system_score_codex":0.00006515584,"about_ca_system_score_gemma":0.000005324576,"threshold_uncertainty_score":0.38488075},"labels":[],"label_agreement":null},{"id":"W4406492657","doi":"10.12794/metadc2048601","title":"Ranaspumin Protein Characterization and Applications for Both Environmental and Medical Purposes","year":2022,"lang":"en","type":"dissertation","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Innotech Alberta; University of North Texas","keywords":"Characterization (materials science); Data science; Engineering; Computer science; Nanotechnology; Materials science","score_opus":0.004064207066576409,"score_gpt":0.2132272473852006,"score_spread":0.2091630403186242,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406492657","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935801,0.00008562673,0.00045918307,0.00026949757,0.00010244905,0.0031515227,0.00043747402,0.00004350048,0.0018706605],"genre_scores_gemma":[0.8871939,0.0011430642,0.000874869,0.00088497426,0.00018585191,0.001976641,0.024938194,0.000079916426,0.08272259],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989178,0.000026620846,0.00022092502,0.00038142246,0.00031219723,0.00014102912],"domain_scores_gemma":[0.99962693,0.000020490666,0.00012846032,0.00009976871,0.0000016873158,0.00012266471],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015813552,0.0001599237,0.00014676322,0.000033213215,0.00020910898,0.0000341803,0.00011119091,0.00016375068,0.018599495],"category_scores_gemma":[0.000014244781,0.00014804277,0.000028969098,0.000049992126,0.00008055005,0.00008676123,0.00006947563,0.00010999688,0.000042048625],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006469294,0.00010237275,0.0020796896,0.00006686919,0.000013824872,7.449382e-7,0.0002589283,8.802579e-8,0.8853351,0.00013922359,0.0004869459,0.11145151],"study_design_scores_gemma":[0.0014445607,0.00021254727,0.1518632,0.000030161877,0.000081738624,0.000012762705,0.0010022876,0.000277736,0.04270177,0.00014190812,0.8013581,0.00087323255],"about_ca_topic_score_codex":0.000027482012,"about_ca_topic_score_gemma":0.00018868649,"teacher_disagreement_score":0.84263337,"about_ca_system_score_codex":0.000064782434,"about_ca_system_score_gemma":0.000017049835,"threshold_uncertainty_score":0.98229766},"labels":[],"label_agreement":null},{"id":"W4406497414","doi":"10.1016/0967-0653(96)83310-2","title":"10.1016/0967-0653(96)83310-2","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Biodegradation; Crude oil; Chemistry; Environmental chemistry; Pulp and paper industry; Environmental science; Petroleum engineering; Geology; Organic chemistry; Engineering","score_opus":0.004745857901567334,"score_gpt":0.157238760240924,"score_spread":0.15249290233935667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406497414","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009537817,0.0000050589356,2.3646213e-7,0.00036901492,0.0000020846878,0.00013786266,0.000020611245,0.00007000573,0.9898573],"genre_scores_gemma":[0.001657427,3.2889466e-7,0.000121331504,0.0002039581,0.000047686528,0.0000023827217,0.000016717584,0.000010385435,0.99793977],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991847,0.00002612323,0.0001384168,0.00022465241,0.00019001299,0.00023607293],"domain_scores_gemma":[0.9996115,0.000011961574,0.000022884658,0.00018958126,0.0000039462816,0.00016014352],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000111653106,0.000107996304,0.00009246477,0.000017539269,0.00006536026,0.000028358905,0.00020909011,0.000055530883,0.9998257],"category_scores_gemma":[0.000013769172,0.00009510748,0.000038294555,0.00019301819,0.00005238169,0.000093738505,0.000058841844,0.000059591828,0.9996492],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024027255,0.00003688904,0.0000035744872,7.6064146e-7,0.0000025693414,0.0000019761917,0.000018049213,0.000031073287,0.0062607373,6.757652e-8,0.5336395,0.45998082],"study_design_scores_gemma":[0.00013547433,0.000051862597,0.00041465877,0.0000030405974,0.0000041128283,0.0000027650688,5.4349454e-7,0.000053349377,0.002843106,0.0000017963163,0.9963433,0.0001459524],"about_ca_topic_score_codex":0.00004996135,"about_ca_topic_score_gemma":0.0000018984588,"teacher_disagreement_score":0.46270385,"about_ca_system_score_codex":0.000063034815,"about_ca_system_score_gemma":0.0000052280984,"threshold_uncertainty_score":0.38783705},"labels":[],"label_agreement":null},{"id":"W4406516031","doi":"10.1016/s0967-0653(97)88236-1","title":"10.1016/s0967-0653(97)88236-1","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Oil spill; Environmental science; Petroleum engineering; Environmental protection; Geology","score_opus":0.005606555203400726,"score_gpt":0.16085777158872647,"score_spread":0.15525121638532574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406516031","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0021421215,0.0000058364694,2.4777452e-7,0.0003815668,0.000001807517,0.00014096442,0.000019245566,0.00006919053,0.997239],"genre_scores_gemma":[0.00035030168,3.7811554e-7,0.0001252019,0.00023360553,0.000047296835,0.0000024488547,0.000014892964,0.0000101830265,0.99921566],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991843,0.000024754258,0.00014136283,0.0002216519,0.00019190545,0.00023604381],"domain_scores_gemma":[0.9996091,0.000012257305,0.000023516262,0.00018925579,0.0000041041912,0.0001617672],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000110963556,0.00010923733,0.000092734284,0.000017788083,0.000065283515,0.00002939234,0.00021069423,0.000056156372,0.99991494],"category_scores_gemma":[0.000014961391,0.00009601108,0.000038806586,0.00019209151,0.000052524392,0.00009800326,0.00006009058,0.000061417144,0.9999537],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025759276,0.000032174317,8.493471e-7,7.025777e-7,0.0000023675052,0.0000018244488,0.00001588208,0.000029331246,0.0019255109,5.4621715e-8,0.25356767,0.7443979],"study_design_scores_gemma":[0.00015322419,0.00005178376,0.00009887361,0.000003072584,0.0000040927916,0.000002535607,4.8021224e-7,0.00004962402,0.0022607204,0.0000016375133,0.9972269,0.00014708364],"about_ca_topic_score_codex":0.000062868974,"about_ca_topic_score_gemma":0.0000018303858,"teacher_disagreement_score":0.7442508,"about_ca_system_score_codex":0.00006195097,"about_ca_system_score_gemma":0.0000053345784,"threshold_uncertainty_score":0.3915218},"labels":[],"label_agreement":null},{"id":"W4406534894","doi":"10.1016/0967-0653(93)95080-p","title":"10.1016/0967-0653(93)95080-p","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Degradation (telecommunications); Phenols; Natural (archaeology); Bacteria; Chemistry; Environmental chemistry; Environmental science; Biology; Organic chemistry; Computer science; Paleontology","score_opus":0.004208544250066192,"score_gpt":0.15263376003351142,"score_spread":0.14842521578344522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406534894","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008463236,0.0000052991177,2.3164682e-7,0.00032857226,0.0000021673302,0.00013906101,0.000020298661,0.00007159373,0.99096954],"genre_scores_gemma":[0.0016494865,3.2333406e-7,0.00012120742,0.00020062113,0.000047250003,0.0000023906343,0.000016473987,0.000010558731,0.9979517],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991814,0.000025818888,0.0001385921,0.00022740586,0.0001904199,0.00023637437],"domain_scores_gemma":[0.99960995,0.000011928978,0.000022897473,0.00018996999,0.000003944519,0.00016132703],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00011112269,0.000108112734,0.000092316885,0.000017542921,0.00006546552,0.000028553857,0.00020969521,0.000055617034,0.9998285],"category_scores_gemma":[0.0000139762815,0.00009516923,0.000038301965,0.00019420558,0.000052461986,0.00009337847,0.00005904782,0.000060503266,0.99966705],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024355491,0.00004551055,0.0000025048332,7.973927e-7,0.0000026653665,0.0000020352177,0.00001999347,0.00003394163,0.0065389113,7.063376e-8,0.5216831,0.47164613],"study_design_scores_gemma":[0.0001357088,0.000059992515,0.00042055015,0.0000030160197,0.0000041062667,0.000002769518,5.620626e-7,0.000052367846,0.0023424935,0.0000017932164,0.99683046,0.00014620223],"about_ca_topic_score_codex":0.000051124982,"about_ca_topic_score_gemma":0.0000019802123,"teacher_disagreement_score":0.47514734,"about_ca_system_score_codex":0.00006336793,"about_ca_system_score_gemma":0.0000052883197,"threshold_uncertainty_score":0.38808885},"labels":[],"label_agreement":null},{"id":"W4406585539","doi":"10.1016/s0967-0653(98)83773-3","title":"10.1016/s0967-0653(98)83773-3","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Degradation (telecommunications); Environmental science; Environmental chemistry; Chemistry; Computer science; Telecommunications","score_opus":0.004888810462803884,"score_gpt":0.16068769215114695,"score_spread":0.15579888168834308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406585539","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0046584685,0.000004911695,2.0215764e-7,0.00033362224,0.0000019499612,0.00013569427,0.000017818558,0.00006801789,0.9947793],"genre_scores_gemma":[0.00075204717,3.5976151e-7,0.00012604552,0.00017920435,0.00004925455,0.0000023195503,0.000013288031,0.00001026156,0.9988672],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991975,0.000025426796,0.000135971,0.00022197716,0.00018756221,0.00023159818],"domain_scores_gemma":[0.9996182,0.000011593966,0.000022591834,0.00018595447,0.0000039544084,0.00015775757],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00010969149,0.000106443484,0.00009427792,0.00001739152,0.0000625638,0.000027633389,0.00020547654,0.000055102417,0.99993354],"category_scores_gemma":[0.000013770545,0.000093652525,0.000037970512,0.00018935671,0.000051077688,0.00009058947,0.00005857757,0.00006017638,0.999906],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023816612,0.000032097716,8.5550306e-7,6.9410896e-7,0.0000024669332,0.0000017946323,0.00001617958,0.00002631576,0.002937111,5.585542e-8,0.6214338,0.37552482],"study_design_scores_gemma":[0.00014232565,0.00004987999,0.00024566433,0.0000030803922,0.0000042722118,0.0000023932996,5.2153337e-7,0.000046615773,0.0022229992,0.0000017948189,0.99713683,0.00014360133],"about_ca_topic_score_codex":0.0000564988,"about_ca_topic_score_gemma":0.000002174142,"teacher_disagreement_score":0.37570307,"about_ca_system_score_codex":0.00006258407,"about_ca_system_score_gemma":0.00000526538,"threshold_uncertainty_score":0.38190392},"labels":[],"label_agreement":null},{"id":"W4406781483","doi":"10.1002/wer.70009","title":"Effect of konjac glucomannan aerogel‐immobilized <scp><i>Chlorella vulgaris</i></scp> LH‐1 on oil‐contaminated seawater remediation and endogenous bacterial community diversity","year":2025,"lang":"en","type":"article","venue":"Water Environment Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"National Natural Science Foundation of China","keywords":"Chlorella vulgaris; Seawater; Aerogel; Environmental remediation; Chemistry; Contamination; Food science; Environmental chemistry; Botany; Algae; Biology; Chemical engineering; Ecology","score_opus":0.025028644983691638,"score_gpt":0.2599525627973986,"score_spread":0.23492391781370695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406781483","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949964,0.0000207003,0.0000037323987,0.00014434726,0.00013765278,0.0005876683,0.000029769373,0.000029234294,0.0040504728],"genre_scores_gemma":[0.99720097,0.0002568552,0.000021636917,0.000069612,0.000023582523,0.000021126732,0.00016861792,0.00001595895,0.0022216693],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99560654,0.0020484128,0.00036161675,0.00048315802,0.0008286797,0.00067157135],"domain_scores_gemma":[0.9985874,0.0005690933,0.000076446966,0.0005805344,0.000014506443,0.00017198845],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0036608684,0.00027478466,0.00034525676,0.00016309167,0.0007630851,0.00006428676,0.0005175014,0.00022385162,0.00086997723],"category_scores_gemma":[0.0001219597,0.00019400567,0.00008238383,0.0001694884,0.00073245016,0.00013532864,0.0021831305,0.00060938206,0.0006079748],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028531256,0.00030408177,0.08476979,0.00007957414,0.000038487626,0.0000086884,0.0016455165,0.000015127209,0.9080088,0.0000030144672,0.0007457906,0.0040957923],"study_design_scores_gemma":[0.0019556035,0.0009111394,0.04374892,0.000028351124,0.000030551586,0.0000020560003,0.00013269926,0.000035854842,0.94367945,0.000027559612,0.00935109,0.00009670579],"about_ca_topic_score_codex":0.0014365977,"about_ca_topic_score_gemma":0.000104455874,"teacher_disagreement_score":0.041020874,"about_ca_system_score_codex":0.0004015477,"about_ca_system_score_gemma":0.000009319309,"threshold_uncertainty_score":0.95256406},"labels":[],"label_agreement":null},{"id":"W4406817820","doi":"10.1016/j.fuel.2025.134488","title":"Sustainable enhancing oil recovery in different reservoirs via reservoir adaptability and multifunction of Bacillus velezensis","year":2025,"lang":"en","type":"article","venue":"Fuel","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Chinese Academy of Sciences; National Natural Science Foundation of China; Shandong University","keywords":"Adaptability; Microbial enhanced oil recovery; Petroleum engineering; Enhanced oil recovery; Environmental science; Geology; Microorganism; Biology; Ecology; Bacteria","score_opus":0.00701111278499461,"score_gpt":0.20941795599774707,"score_spread":0.20240684321275246,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406817820","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955306,0.000076968136,0.00006971926,0.00038974092,0.00012354818,0.00010805445,0.0000061048786,0.0000128632255,0.0036823729],"genre_scores_gemma":[0.99482346,0.00010884487,0.00018846369,0.000051196217,0.000008577523,0.0000042830306,0.000005752,0.0000038051182,0.0048056175],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990352,0.00008037416,0.0002678565,0.0002655388,0.0001396128,0.00021144224],"domain_scores_gemma":[0.99958855,0.00007670467,0.00006480748,0.00020627528,0.000020448684,0.000043243763],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038613073,0.00009855676,0.00015917851,0.00006379032,0.000049602335,0.00001317759,0.00009351568,0.0000814922,0.00045944063],"category_scores_gemma":[0.00025905462,0.00008276473,0.000031913612,0.0003069459,0.00009404594,0.00013922593,0.00022004076,0.000092706265,0.000016801057],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038931973,0.00025990562,0.3121344,0.00044623914,0.000014068092,0.0000051150378,0.00074120384,0.00027622993,0.6654953,0.000027048442,0.0017646754,0.018446494],"study_design_scores_gemma":[0.00073215255,0.000076127646,0.9173197,0.00005813023,0.000009742128,5.831401e-7,0.0010177962,0.00086160336,0.074515305,0.0007194749,0.0045291535,0.00016020602],"about_ca_topic_score_codex":0.0026181235,"about_ca_topic_score_gemma":0.00665622,"teacher_disagreement_score":0.60518533,"about_ca_system_score_codex":0.00027797223,"about_ca_system_score_gemma":0.000016512382,"threshold_uncertainty_score":0.5030553},"labels":[],"label_agreement":null},{"id":"W4407230023","doi":"10.1016/j.envadv.2025.100619","title":"Assessing the effect of deposited bitumen or asphaltenes on the nitrification process in the north saskatchewan river sediment","year":2025,"lang":"en","type":"article","venue":"Environmental Advances","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Devon Energy (Canada); Natural Resources Canada","funders":"Natural Resources Canada","keywords":"Asphaltene; Asphalt; Sediment; Nitrification; Environmental science; Oil sands; Environmental engineering; Environmental chemistry; Geology; Nitrogen; Geography; Chemistry; Geomorphology; Archaeology","score_opus":0.006201695887005813,"score_gpt":0.2541696434036559,"score_spread":0.24796794751665008,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407230023","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976144,0.00011234516,0.000022075059,0.00088190363,0.00006882481,0.0006413269,0.000009357849,0.000007816505,0.0006419876],"genre_scores_gemma":[0.9990494,0.00006986974,0.000034924346,0.00064210524,0.000012669507,0.00004226659,0.000013237603,0.00000468887,0.00013083307],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99880993,0.00026455574,0.00021992665,0.00021944444,0.00032953144,0.00015659677],"domain_scores_gemma":[0.9992693,0.0003496234,0.00013768289,0.00022566562,9.896994e-7,0.000016727274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040987448,0.00013932394,0.00010848283,0.000020978736,0.00021161363,0.000033624943,0.0003892508,0.00003100843,0.00023200054],"category_scores_gemma":[0.000024394743,0.00005466579,0.000037877166,0.00030425578,0.00035783136,0.00020838928,0.000060899445,0.00012806685,0.000051809944],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012302317,0.00018899883,0.87545276,0.000022542717,0.00001592646,0.0000025343666,0.0023057838,0.0010745677,0.09791519,0.000004642564,0.00018031572,0.022713719],"study_design_scores_gemma":[0.00037368093,0.00015239626,0.7511086,0.00003165852,0.000022553053,0.000001365262,0.0027592543,0.00013614507,0.24337941,0.000032823682,0.001903848,0.000098287754],"about_ca_topic_score_codex":0.000051960797,"about_ca_topic_score_gemma":0.00024368473,"teacher_disagreement_score":0.14546423,"about_ca_system_score_codex":0.00010029253,"about_ca_system_score_gemma":0.000007199388,"threshold_uncertainty_score":0.25402433},"labels":[],"label_agreement":null},{"id":"W4407244258","doi":"10.62051/ijsspa.v5n2.20","title":"Mechanistic Study on Microbial Degradation and Transformation of Hexachloro-1,3-butadiene under Anoxic Conditions","year":2024,"lang":"en","type":"article","venue":"International Journal of Social Sciences and Public Administration","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Anoxic waters; Degradation (telecommunications); Transformation (genetics); Microbial biodegradation; 1,3-Butadiene; Environmental chemistry; Chemistry; Biochemical engineering; Biology; Bacteria; Microorganism; Organic chemistry; Biochemistry; Engineering; Genetics","score_opus":0.02879224851442149,"score_gpt":0.31444103355241737,"score_spread":0.2856487850379959,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407244258","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9919846,0.000014870188,0.0011724341,0.005468921,0.00039056857,0.0001070891,0.00003993364,0.000006822765,0.00081475434],"genre_scores_gemma":[0.9996351,0.000027725631,0.00008673789,0.00011576926,0.00008866276,8.6147105e-7,0.000013306665,0.0000025123966,0.000029300847],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998989,0.000049413837,0.00032826254,0.00011982487,0.0004308297,0.00008267883],"domain_scores_gemma":[0.99964637,0.000052732532,0.00017671558,0.000019367597,0.000058614845,0.000046208497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005294095,0.00007029899,0.0000866268,0.00012112403,0.00014086644,0.00022035633,0.00012312231,0.000041414,0.00029201427],"category_scores_gemma":[0.00003486943,0.000056150864,0.000033752607,0.0001922287,0.00021386825,0.0007193394,0.000019058418,0.00007173891,0.0000049110504],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003512787,0.0016900455,0.01965562,0.000048312857,0.00028827446,0.00003958283,0.01324749,0.00008747725,0.6932725,0.21592636,0.0025597354,0.05283334],"study_design_scores_gemma":[0.0061960784,0.013791052,0.7904314,0.00035459423,0.0004016239,0.0010502873,0.05330651,0.008039836,0.068703465,0.041064426,0.0151675595,0.0014931718],"about_ca_topic_score_codex":0.00001772755,"about_ca_topic_score_gemma":0.00011585868,"teacher_disagreement_score":0.7707758,"about_ca_system_score_codex":0.00006692314,"about_ca_system_score_gemma":0.00007185658,"threshold_uncertainty_score":0.31973514},"labels":[],"label_agreement":null},{"id":"W4407450550","doi":"10.1101/2025.02.13.638192","title":"<i>Dehalobacter</i> dechlorinates dichloroanilines and contributes to the natural attenuation of dichloronitrobenzenes at a complex industrial site","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Fundação de Amparo à Ciência e Tecnologia do Estado de Pernambuco","keywords":"Microcosm; Biotransformation; Reductive dechlorination; Bioremediation; Environmental chemistry; Chemistry; Biodegradation; Biology; Ecology; Contamination; Biochemistry; Organic chemistry; Enzyme","score_opus":0.01572393805831876,"score_gpt":0.21435867155206864,"score_spread":0.19863473349374988,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407450550","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948638,0.00041204062,0.0000592588,0.001539285,0.0010631377,0.0010264546,0.0009124525,0.000114580136,0.000008971287],"genre_scores_gemma":[0.99851876,0.00016656214,0.00039899285,0.00065100024,0.00017273611,0.000044267177,0.0000038210824,0.000023774492,0.00002010136],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.997785,0.00013481954,0.00058433955,0.00073061255,0.00036935663,0.00039588934],"domain_scores_gemma":[0.99851036,0.00015582808,0.0004092238,0.00062738376,0.00014868405,0.00014849278],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005715498,0.00042754647,0.0004934261,0.00011151247,0.0002305147,0.00012463242,0.0005341311,0.00035656575,0.000099717945],"category_scores_gemma":[0.00036861663,0.0003358989,0.00010227163,0.000555419,0.00024382565,0.000110908855,0.0016813849,0.0003960719,0.000071351424],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010459203,0.000047484533,0.18148364,0.00005152606,0.000056539513,0.0000017393772,0.000019734982,0.000052949545,0.81509155,0.000038228663,0.003037437,0.000014561779],"study_design_scores_gemma":[0.0006821387,0.000035859604,0.5390208,0.00018229653,0.000112433605,1.3717091e-8,0.000003602592,0.00036681053,0.4379784,0.0000012105176,0.021220982,0.00039547993],"about_ca_topic_score_codex":0.00032705828,"about_ca_topic_score_gemma":0.00026555907,"teacher_disagreement_score":0.37711316,"about_ca_system_score_codex":0.000385931,"about_ca_system_score_gemma":0.00009830566,"threshold_uncertainty_score":0.9999093},"labels":[],"label_agreement":null},{"id":"W4407528366","doi":"10.1128/aem.01501-24","title":"Deciphering reductive dehalogenase specificity through targeted mutagenesis of chloroalkane reductases","year":2025,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Ontario; University of Wisconsin-Madison","keywords":"Chemistry; Saturated mutagenesis; Dehalogenase; Active site; Stereochemistry; Substrate (aquarium); Residue (chemistry); Mutagenesis; Protein engineering; Enzyme; Biochemistry; Directed evolution; Mutant; Biology","score_opus":0.0052376987647856695,"score_gpt":0.19110249007960967,"score_spread":0.185864791314824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407528366","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953642,0.00027406635,0.00009297779,0.00008651704,0.0001360187,0.00025789696,0.00019173496,0.000020155048,0.0035764498],"genre_scores_gemma":[0.9973797,0.00036419556,0.0015195209,0.00029960548,0.000018890578,0.00000737108,0.0001687487,0.000009697782,0.00023224586],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99890316,0.000034936707,0.00030018075,0.00044980113,0.00004722149,0.00026471892],"domain_scores_gemma":[0.99961,0.000034469613,0.00011065581,0.00019520358,0.0000013581173,0.00004830772],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008844895,0.00019842344,0.00025662244,0.000029118675,0.000106532025,0.0000064094415,0.00015329447,0.00014009613,0.0018505023],"category_scores_gemma":[0.000006499734,0.00018011632,0.000049300885,0.00013266629,0.00079024903,0.000053540556,0.00027299585,0.00008919661,0.000102985854],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006696257,0.00012944198,0.0063398,0.000007947016,0.000031336484,0.0000019244185,0.00019900396,0.000028782086,0.98951095,0.000104300416,0.00094025984,0.0026393072],"study_design_scores_gemma":[0.0004649015,0.000040679206,0.031554755,0.0000064183428,0.000026635156,0.000014988059,0.000517128,0.000003538729,0.95781153,0.00023231521,0.009138665,0.00018846158],"about_ca_topic_score_codex":0.0000994461,"about_ca_topic_score_gemma":0.00001864585,"teacher_disagreement_score":0.03169942,"about_ca_system_score_codex":0.00011831623,"about_ca_system_score_gemma":0.0000066872117,"threshold_uncertainty_score":0.99906194},"labels":[],"label_agreement":null},{"id":"W4407964077","doi":"10.1016/j.biortech.2025.132255","title":"Implementation of an adaptive laboratory evolution strategy for improved production of valuable microbial secondary metabolites","year":2025,"lang":"en","type":"article","venue":"Bioresource Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada; Armand-Frappier Foundation","keywords":"Rhamnolipid; Swarming motility; Bacteria; Biology; Swarming (honey bee); Agar; Biofilm; Synthetic biology; Agar plate; Microbiology; Computational biology; Pseudomonas aeruginosa; Genetics","score_opus":0.007953978960137607,"score_gpt":0.255591869454486,"score_spread":0.24763789049434837,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407964077","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978436,0.00011414162,0.0006014321,0.00027169552,0.0001418361,0.00065019086,0.00020193888,0.000060095153,0.0001150176],"genre_scores_gemma":[0.9958334,0.0000074262944,0.0039278604,0.000033612905,0.000017209835,0.000018919009,0.00003858127,0.000007028307,0.00011599291],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990863,0.000043138287,0.0003337205,0.0002893287,0.000068197754,0.00017928789],"domain_scores_gemma":[0.99942136,0.00001213262,0.00024711768,0.00022054378,0.000076986296,0.000021845539],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027470104,0.000108651584,0.00018596805,0.00019844041,0.00006033241,0.000004624846,0.00017994604,0.00017104973,0.0002097118],"category_scores_gemma":[0.000043016695,0.00010453976,0.000040669882,0.00064473384,0.00030660027,0.00011950126,0.00007173402,0.0000739125,0.000004414572],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000882083,0.00007967622,0.0046585044,0.000018443807,0.000019992895,4.2458286e-8,0.000050548413,0.000019367475,0.9728126,0.00066603813,0.0006885811,0.020897985],"study_design_scores_gemma":[0.000584396,0.00033671872,0.01937427,0.000006913351,0.000037071302,5.839969e-7,0.0011041387,0.00012505901,0.97379345,0.0009858335,0.0035588415,0.00009271749],"about_ca_topic_score_codex":0.00024643258,"about_ca_topic_score_gemma":0.0004737798,"teacher_disagreement_score":0.020805268,"about_ca_system_score_codex":0.0001035707,"about_ca_system_score_gemma":0.000086604225,"threshold_uncertainty_score":0.42630076},"labels":[],"label_agreement":null},{"id":"W4408064879","doi":"10.3390/su17052110","title":"Unlocking the Potential of Biosurfactants in Agriculture: Novel Applications and Future Directions","year":2025,"lang":"en","type":"article","venue":"Sustainability","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Agriculture; Biochemical engineering; Biotechnology; Environmental science; Engineering; Biology; Ecology","score_opus":0.002744094079187098,"score_gpt":0.2173180029829154,"score_spread":0.2145739089037283,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408064879","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99084955,0.00013828384,0.00037498126,0.0067468584,0.000096955795,0.00067787856,0.000022916129,0.000018705676,0.0010738608],"genre_scores_gemma":[0.99952716,0.000073664676,0.00010779476,0.000082526,0.000019510324,0.000014384617,0.0000032574947,0.0000016870247,0.00017002752],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993567,0.00004080398,0.00017974299,0.00019770482,0.000091999886,0.00013305245],"domain_scores_gemma":[0.999675,0.000030658077,0.00005176157,0.00017501997,0.0000428359,0.000024754143],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002514318,0.000072321964,0.0000846327,0.00002588524,0.00012605012,0.000013917711,0.00012045912,0.00006311751,0.00008695866],"category_scores_gemma":[0.000060036997,0.000046293426,0.000029320889,0.00066020037,0.00021713207,0.000060002123,0.00011833319,0.00009707304,0.0000020922748],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004690348,0.00061730045,0.68614435,0.00011422431,0.000020310794,9.279522e-7,0.000965028,0.00022763004,0.22768636,0.0031977145,0.00092746783,0.08005182],"study_design_scores_gemma":[0.0001806856,0.000006478282,0.94151497,0.0000026807465,0.000008308268,8.584734e-7,0.00102445,0.000049916634,0.0027132723,0.001213574,0.05322496,0.000059851547],"about_ca_topic_score_codex":0.00042891677,"about_ca_topic_score_gemma":0.0005799031,"teacher_disagreement_score":0.25537065,"about_ca_system_score_codex":0.00023395823,"about_ca_system_score_gemma":0.000038675822,"threshold_uncertainty_score":0.1887791},"labels":[],"label_agreement":null},{"id":"W4408440027","doi":"10.5194/egusphere-egu25-4230","title":"Microbial turnover of hydrocarbons at a leaking abandoned oil well in Germany","year":2025,"lang":"en","type":"preprint","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Petroleum engineering; Environmental science; Chemistry; Business; Geology","score_opus":0.008338842012741616,"score_gpt":0.22089422234558487,"score_spread":0.21255538033284324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408440027","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8401878,0.000030349107,0.000011049527,0.00021428723,0.00039647397,0.00014218551,0.000058754704,0.00002770823,0.1589314],"genre_scores_gemma":[0.978627,0.000093317816,0.00033998323,0.0003987436,0.000027193191,0.0000039015863,0.000033306736,0.000009028427,0.020467479],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99844635,0.000057705518,0.00049738324,0.0004962004,0.00022739056,0.0002749753],"domain_scores_gemma":[0.9993331,0.000035774534,0.00022542187,0.00034289775,0.00000479645,0.000058029098],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021254357,0.00024326843,0.0003500958,0.00007705399,0.000031468793,0.000017181466,0.000380264,0.00032191564,0.0068975],"category_scores_gemma":[0.000018930476,0.00021950471,0.00014578756,0.0002020292,0.00013075223,0.000042083913,0.0016699614,0.0003100288,0.00040554348],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012591698,0.00017974724,0.029833868,0.00011074685,0.00002571253,0.000009372469,0.00053661456,0.00041007547,0.95850724,0.000011974827,0.008956803,0.0012919132],"study_design_scores_gemma":[0.0035454188,0.000044724904,0.12601419,0.00073085853,0.00009291608,0.000009492302,0.000044069133,0.0019200603,0.797275,0.00016391183,0.06864203,0.0015173347],"about_ca_topic_score_codex":0.0016637841,"about_ca_topic_score_gemma":0.00845805,"teacher_disagreement_score":0.16123226,"about_ca_system_score_codex":0.0003934609,"about_ca_system_score_gemma":0.000043555316,"threshold_uncertainty_score":0.9940103},"labels":[],"label_agreement":null},{"id":"W4409343599","doi":"10.18280/ijdne.200320","title":"The Relationship Between Soil Oil Pollution Levels, Microbial Enzyme Activity, and Bioremediation Strategies","year":2025,"lang":"en","type":"article","venue":"International Journal of Design & Nature and Ecodynamics","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Mustansiriyah University; National University of Science and Technology; University of Tabuk","keywords":"Bioremediation; Environmental science; Pollution; Soil enzyme; Environmental engineering; Enzyme assay; Biology; Enzyme; Ecology; Contamination; Biochemistry","score_opus":0.017563683606634885,"score_gpt":0.26373605034726627,"score_spread":0.2461723667406314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409343599","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9845108,0.00026166,0.00778825,0.0061575826,0.0008175424,0.0000530883,0.000031602,0.000008045978,0.00037144768],"genre_scores_gemma":[0.9983272,0.00040787325,0.000617733,0.00022420885,0.0001496967,4.3743879e-7,0.0000066439457,0.000004596588,0.00026162108],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991167,0.000091546855,0.00028470324,0.00012405172,0.00026462096,0.00011833093],"domain_scores_gemma":[0.9991724,0.0003725718,0.00027720493,0.000060198377,0.00006840822,0.00004923951],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005965677,0.00010571708,0.000107449545,0.00010594589,0.00017846104,0.00020149346,0.0002260579,0.00018695476,0.000014989064],"category_scores_gemma":[0.00024617926,0.00007653995,0.000043107266,0.00014322916,0.00013990507,0.00042666157,0.00008471372,0.00038585736,0.00000456456],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00081430306,0.00017208412,0.39046726,0.00003328124,0.0004267628,0.000023674775,0.0008127502,0.0021127665,0.43928957,0.009725568,0.010201074,0.14592092],"study_design_scores_gemma":[0.0008292879,0.00006642548,0.980636,0.00005933398,0.000051823605,0.000039634677,0.00013090382,0.001633648,0.006221803,0.0074466364,0.0027276452,0.00015687585],"about_ca_topic_score_codex":0.000023245602,"about_ca_topic_score_gemma":0.00026838825,"teacher_disagreement_score":0.5901687,"about_ca_system_score_codex":0.0001575829,"about_ca_system_score_gemma":0.000076755015,"threshold_uncertainty_score":0.31212088},"labels":[],"label_agreement":null},{"id":"W4409501788","doi":"10.5006/c2022-18009","title":"Impact of Preservation Method, Storage Temperature, and Processing Time on Microbiological Community Shift in Solid Samples Collected from Crude Oil Transmission Pipelines","year":2022,"lang":"en","type":"article","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Suez (Canada); University of Calgary","funders":"","keywords":"Pipeline transport; Crude oil; Petroleum engineering; Transmission (telecommunications); Computer science; Petroleum; Environmental science; Process engineering; Chemistry; Engineering; Telecommunications; Environmental engineering","score_opus":0.02368890108293851,"score_gpt":0.2865553629993182,"score_spread":0.2628664619163797,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409501788","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989967,0.00002931413,0.00009943817,0.00017340167,0.000011506302,0.00011749686,0.00019586348,0.000023108407,0.00035318657],"genre_scores_gemma":[0.9971303,0.000016798633,0.0022700347,0.00016894045,0.000005798851,0.000003800169,0.00021701299,0.0000057353705,0.00018159562],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99867344,0.0006328129,0.00024267835,0.00018369318,0.00013554268,0.0001318252],"domain_scores_gemma":[0.9995886,0.00015203674,0.00009143818,0.00011065972,0.000008590514,0.000048664642],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00046866256,0.00011669175,0.0001842196,0.00004473549,0.00025416308,0.00002165619,0.00016902942,0.00007299247,0.004506149],"category_scores_gemma":[0.000060424176,0.000081547325,0.000037750404,0.00033653784,0.00006319355,0.00010496426,0.00013269573,0.00028285323,0.0000050347744],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021422893,0.00025544994,0.018050741,0.0000060485145,0.000003973941,6.1260585e-7,0.000875948,0.0006775355,0.9757235,3.176267e-7,0.0006834959,0.0035081692],"study_design_scores_gemma":[0.00084235606,0.0003417053,0.891406,0.000029820254,0.000007096254,0.000002038821,0.00014515175,0.002885129,0.103538,0.00008099742,0.0005350508,0.00018667479],"about_ca_topic_score_codex":0.0036292016,"about_ca_topic_score_gemma":0.00059344206,"teacher_disagreement_score":0.8733552,"about_ca_system_score_codex":0.00012480177,"about_ca_system_score_gemma":0.00002100016,"threshold_uncertainty_score":0.9964039},"labels":[],"label_agreement":null},{"id":"W4410019867","doi":"10.1016/j.wasman.2025.114849","title":"Response of methane oxidation biosystems to controlled ingress of oxygen","year":2025,"lang":"en","type":"article","venue":"Waste Management","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada; Université de Sherbrooke; Université Laval","keywords":"Methane; Anaerobic oxidation of methane; Oxygen; Environmental science; Chemistry; Environmental chemistry; Waste management; Chemical engineering; Engineering; Organic chemistry","score_opus":0.006659695256447667,"score_gpt":0.2331143798001151,"score_spread":0.22645468454366743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410019867","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9887341,0.000013861284,0.0005385594,0.0006384523,0.0001757949,0.00075190223,0.000008237603,0.000010350208,0.009128721],"genre_scores_gemma":[0.99426115,0.000008437127,0.00071588473,0.00022972177,0.0000039425327,0.000009515532,0.00000309973,0.0000030457406,0.004765221],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99906754,0.0001254399,0.000333405,0.00015869565,0.00020921907,0.00010566595],"domain_scores_gemma":[0.99956876,0.000039418137,0.00013765847,0.0002093432,0.000012724535,0.00003207915],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00082915986,0.00007384191,0.0001938269,0.00012493569,0.000014154772,0.0000065311046,0.00017856425,0.000027553835,0.0003076863],"category_scores_gemma":[0.000051004357,0.00006133417,0.000046157285,0.00039884177,0.00003184664,0.00003284852,0.00019959529,0.00001792202,0.000079543825],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013699153,0.000063671614,0.0012138856,0.000052552165,0.0000539081,0.0000010512294,0.00014508145,0.00031087062,0.99018484,0.00019862298,0.003843842,0.002561755],"study_design_scores_gemma":[0.0034943467,0.000119007476,0.027879208,0.00012334491,0.000058854723,1.4372391e-7,0.0007251718,0.00027278706,0.9492471,0.00002882321,0.01792146,0.00012974358],"about_ca_topic_score_codex":0.000056316738,"about_ca_topic_score_gemma":0.000026038651,"teacher_disagreement_score":0.040937737,"about_ca_system_score_codex":0.00006251809,"about_ca_system_score_gemma":0.000004307473,"threshold_uncertainty_score":0.33689493},"labels":[],"label_agreement":null},{"id":"W4410033128","doi":"10.1039/d4va00203b","title":"Environmental restoration of polyaromatic hydrocarbon-contaminated soil through sustainable rhizoremediation: insights into bioeconomy and high-throughput systematic analysis","year":2025,"lang":"en","type":"article","venue":"Environmental Science Advances","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Agroscope; Department of Biotechnology, Ministry of Science and Technology, India; Directorate for Biological Sciences; York University","keywords":"Environmental science; Soil contamination; Environmental chemistry; Hydrocarbon; Chemistry; Soil science; Soil water; Organic chemistry","score_opus":0.0023158141732051796,"score_gpt":0.19986173480229646,"score_spread":0.1975459206290913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410033128","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99606997,0.001265135,0.00065677153,0.00013226998,0.00015687713,0.0006787433,0.00000986196,0.000027856155,0.0010024918],"genre_scores_gemma":[0.997789,0.00054043334,0.0009917357,0.00017415096,0.000012292461,0.000030379764,0.000037273872,0.000008230227,0.00041649456],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997485,0.00010476529,0.00067843276,0.00070804433,0.0006191713,0.00040459694],"domain_scores_gemma":[0.9989366,0.00009527306,0.00043706584,0.0004078191,0.0000044382673,0.00011881321],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046288042,0.0002738152,0.0004644553,0.00024757953,0.0004701401,0.00006963687,0.00043330697,0.00008877438,0.00040897544],"category_scores_gemma":[0.00006136842,0.00023578401,0.000080876496,0.001281241,0.0019369622,0.0020000883,0.00039015038,0.00009612563,0.00008223962],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043016415,0.00037598508,0.16651838,0.000735139,0.00015530048,0.000009589971,0.0040957667,0.0016683368,0.82397556,0.0007173606,0.000047866717,0.0016576932],"study_design_scores_gemma":[0.0014812641,0.00034374464,0.40742105,0.0002889602,0.00072150683,0.0000054091383,0.011414518,0.0051530395,0.56664824,0.004540077,0.0010302633,0.00095192244],"about_ca_topic_score_codex":0.00041878506,"about_ca_topic_score_gemma":0.00019451696,"teacher_disagreement_score":0.25732732,"about_ca_system_score_codex":0.0008115146,"about_ca_system_score_gemma":0.000033653378,"threshold_uncertainty_score":0.9614993},"labels":[],"label_agreement":null},{"id":"W4410377590","doi":"10.1016/j.marpolbul.2025.118147","title":"Biosurfactant-based dispersants for oil spill remediation: Salinity effects and mechanistic insights","year":2025,"lang":"en","type":"article","venue":"Marine Pollution Bulletin","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Natural Resources Canada; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Compute Canada","keywords":"Environmental remediation; Dispersant; Oil spill; Salinity; Environmental science; Petroleum engineering; Oil pollution; Environmental chemistry; Environmental engineering; Chemistry; Oceanography; Geology; Contamination; Ecology; Dispersion (optics); Biology","score_opus":0.0052235146387579505,"score_gpt":0.21042520196971706,"score_spread":0.20520168733095911,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410377590","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96435046,0.00008962977,0.004294566,0.016772255,0.0011870747,0.0007895222,0.000092647446,0.0002018159,0.012222002],"genre_scores_gemma":[0.9927335,0.00005091063,0.002670933,0.0025508048,0.00004441091,0.000020499256,0.00006482668,0.000010480527,0.0018536429],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99883956,0.00007766593,0.00026617988,0.0003836867,0.00018376575,0.0002491491],"domain_scores_gemma":[0.9994423,0.00013839113,0.000102948325,0.00018898555,0.000020930196,0.00010646076],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002535832,0.00018403553,0.00018518882,0.00007076738,0.00023778966,0.000040836137,0.00012445808,0.00011674761,0.0017542401],"category_scores_gemma":[0.00037416432,0.00016234994,0.000057267112,0.00023718858,0.00013706324,0.00003025036,0.00015608591,0.00008361167,0.00030217075],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011653698,0.00082189165,0.07324595,0.00086832524,0.000110423745,0.000022568223,0.0003042535,0.00017281588,0.6687533,0.0062531363,0.08194354,0.1663384],"study_design_scores_gemma":[0.006818637,0.00040175903,0.32110906,0.00014577578,0.0001618588,0.0000041322273,0.00005601498,0.0059423,0.19457385,0.0027693564,0.4670251,0.000992156],"about_ca_topic_score_codex":0.00017699646,"about_ca_topic_score_gemma":0.00021084266,"teacher_disagreement_score":0.47417948,"about_ca_system_score_codex":0.00015333075,"about_ca_system_score_gemma":0.00002503776,"threshold_uncertainty_score":0.99915826},"labels":[],"label_agreement":null},{"id":"W4410526030","doi":"10.18280/ijdne.200420","title":"Remediation of Oil-Contaminated Soil Using Nerium oleander Extract: Mechanisms of Hydrocarbon Absorption and Removal","year":2025,"lang":"en","type":"article","venue":"International Journal of Design & Nature and Ecodynamics","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Mustansiriyah University; University of Tabuk","keywords":"Environmental remediation; Contamination; Waste management; Hydrocarbon; Environmental science; Soil contamination; Absorption (acoustics); Oil spill; Environmental chemistry; Petroleum engineering; Environmental engineering; Chemistry; Engineering; Materials science; Biology; Organic chemistry; Composite material","score_opus":0.007752382058953789,"score_gpt":0.23347444399060704,"score_spread":0.22572206193165326,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410526030","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9706797,0.00016930641,0.027832137,0.00032016705,0.00058148673,0.000046146975,0.0000103948505,0.0000033195972,0.00035733674],"genre_scores_gemma":[0.99335176,0.0005610036,0.0058319513,0.00013231846,0.0000321486,1.2966808e-7,0.000006694068,0.0000048750553,0.00007910314],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99904674,0.000044544257,0.00042404805,0.000109824694,0.00029551642,0.000079300116],"domain_scores_gemma":[0.99923354,0.000061429455,0.00050554215,0.00005092393,0.00011126747,0.000037280897],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044139652,0.00009149423,0.00016446505,0.0001609305,0.000022827917,0.000018024179,0.00013451648,0.00017355921,0.00003502902],"category_scores_gemma":[0.00008504664,0.00007931178,0.000046082834,0.00012528074,0.000065778426,0.00021300238,0.00005027306,0.00019387185,4.466696e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023491074,0.00006153998,0.0019276727,0.000015214464,0.00006584476,0.00001138598,0.00013398447,0.0011837966,0.98336613,0.00032050232,0.00005429986,0.012624739],"study_design_scores_gemma":[0.004785719,0.00048445503,0.0648525,0.00068607053,0.0003195394,0.0005753363,0.0005226927,0.38754997,0.5240925,0.0150678875,0.00053801446,0.0005253306],"about_ca_topic_score_codex":0.000026827956,"about_ca_topic_score_gemma":0.000041435447,"teacher_disagreement_score":0.4592736,"about_ca_system_score_codex":0.000100278034,"about_ca_system_score_gemma":0.000034195175,"threshold_uncertainty_score":0.32342407},"labels":[],"label_agreement":null},{"id":"W4410541520","doi":"10.1007/s43832-025-00228-8","title":"Biosurfactant-producing bacteria counteract hydrocarbon-driven delay of sulfolane migration in groundwater","year":2025,"lang":"en","type":"article","venue":"Discover Water","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Shell Canada","keywords":"Sulfolane; Groundwater; Bacteria; Hydrocarbon; Chemistry; Environmental science; Petroleum engineering; Geology; Geotechnical engineering; Organic chemistry; Paleontology","score_opus":0.005596183100082935,"score_gpt":0.21270638460698665,"score_spread":0.2071102015069037,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410541520","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976584,0.0000066827,0.000028389424,0.0005051158,0.00030678688,0.00018802322,0.00001904363,0.00001315366,0.0012744245],"genre_scores_gemma":[0.9986677,0.000016969401,0.00010162762,0.0003015239,0.000016069302,0.0000030603758,0.00011292946,0.000008303854,0.00077178434],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99886024,0.000050480416,0.0003503432,0.00031724494,0.00016398517,0.00025772335],"domain_scores_gemma":[0.9996692,0.00001295713,0.000056653713,0.00022480778,0.000007904079,0.000028484463],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017358467,0.00014632572,0.00017785511,0.00006965846,0.000032112133,0.000043057174,0.00016189562,0.00007219915,0.0014344025],"category_scores_gemma":[0.0000069565203,0.00009709824,0.00005060121,0.00015770359,0.00007242493,0.00035627568,0.00012187805,0.00007932387,0.0002786285],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042747564,0.00006655309,0.31904703,0.000009764892,0.000007558308,0.0000032303167,0.0006922774,0.00011293643,0.6795246,0.0000034909176,0.00038929193,0.00010053413],"study_design_scores_gemma":[0.0004468805,0.00003363952,0.3350949,0.00004256428,0.000010770517,0.000001797711,0.000047042206,0.00043375703,0.6597855,0.00005555514,0.003881652,0.0001659683],"about_ca_topic_score_codex":0.0017029578,"about_ca_topic_score_gemma":0.0022687027,"teacher_disagreement_score":0.019739099,"about_ca_system_score_codex":0.000121733625,"about_ca_system_score_gemma":0.000010569912,"threshold_uncertainty_score":0.9994784},"labels":[],"label_agreement":null},{"id":"W4410906638","doi":"10.1002/cjce.25751","title":"Bioelectrochemical treatment of oil sands process‐affected water: A comparative study","year":2025,"lang":"en","type":"article","venue":"The Canadian Journal of Chemical Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Devon Energy (Canada); Natural Resources Canada; National Research Council Canada","funders":"Office of Energy Research and Development; Natural Resources Canada; National Research Council Canada","keywords":"Oil sands; Environmental science; Process (computing); Petroleum engineering; Geology; Geography; Asphalt; Computer science; Archaeology","score_opus":0.007552358581431985,"score_gpt":0.21857839691825248,"score_spread":0.2110260383368205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410906638","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99935615,0.000042199776,0.000008753236,0.00023893661,0.000059311693,0.00006038636,0.000002790819,0.000004205708,0.00022727039],"genre_scores_gemma":[0.99987096,0.0000014625487,0.000036816687,0.000020018928,0.000022222694,0.0000013910642,0.0000016348054,0.0000034687996,0.000042019798],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99939173,0.000014471298,0.00022649008,0.00007260987,0.000096654665,0.00019805816],"domain_scores_gemma":[0.9996724,0.0000236759,0.00005079232,0.00007639344,0.000023617644,0.00015307881],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010838321,0.000095110656,0.00018814845,0.000051033185,0.000030798175,0.000013451887,0.00017860944,0.000039626582,0.00016975662],"category_scores_gemma":[0.000026888441,0.000053421943,0.000052841926,0.00019729276,0.00007121127,0.00003260073,0.00000965631,0.00009647386,0.0000055363953],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018274342,0.00006217287,0.0017070593,0.0000057748643,0.000046318033,0.0000044371423,0.0016966863,0.00043578932,0.9955802,0.0000027077187,0.00008892077,0.00035165378],"study_design_scores_gemma":[0.00050636835,0.0001287404,0.0007677925,0.00001873317,0.000032825435,0.0000091378915,0.00006448991,0.00043084196,0.99765533,0.00000945254,0.00031458147,0.00006172219],"about_ca_topic_score_codex":0.0006156176,"about_ca_topic_score_gemma":0.000572977,"teacher_disagreement_score":0.0020751085,"about_ca_system_score_codex":0.00031739313,"about_ca_system_score_gemma":0.00007734561,"threshold_uncertainty_score":0.21784836},"labels":[],"label_agreement":null},{"id":"W4411334264","doi":"10.1016/j.anaerobe.2025.102979","title":"Exploring benzene mineralization by anaerobes isolated from denitrifying enrichment cultures","year":2025,"lang":"en","type":"article","venue":"Anaerobe","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia, Okanagan Campus","funders":"European Regional Development Fund; Helmholtz Association; Helmholtz-Gemeinschaft; Deutscher Akademischer Austauschdienst","keywords":"Denitrifying bacteria; Mineralization (soil science); Chemistry; Benzene; Environmental chemistry; Microbiology; Biology; Denitrification; Organic chemistry; Nitrogen","score_opus":0.023167769403075054,"score_gpt":0.23797931947706877,"score_spread":0.21481155007399372,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411334264","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945447,0.00023766083,0.001252928,0.00048688936,0.00028983143,0.00014787118,0.000024592257,0.000079078345,0.0029364603],"genre_scores_gemma":[0.9959203,0.00056566467,0.00068457925,0.0010276978,0.000029508112,0.000008301724,0.00018802211,0.000007768325,0.0015681342],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990629,0.000039832914,0.0002231396,0.00030205795,0.00016402884,0.0002080475],"domain_scores_gemma":[0.9996811,0.000020006575,0.00006422964,0.00016029156,0.000010717825,0.00006365153],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00006943256,0.00014061056,0.000121207,0.000036108333,0.00013550992,0.00005511493,0.00017195955,0.0000679119,0.0012196524],"category_scores_gemma":[0.000027227854,0.00012342769,0.000040901938,0.0004069606,0.000034995926,0.0002901374,0.00009996072,0.00007547982,0.00022369905],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013702079,0.00006701311,0.037821654,0.0000029250473,0.000020881254,0.0000016797306,0.000300445,0.00012004871,0.89193135,0.000053432173,0.06585628,0.0038105773],"study_design_scores_gemma":[0.0013603438,0.000100724355,0.1288998,0.000090012254,0.00007804711,6.8073075e-7,0.00045079231,0.0013890374,0.66321,0.00022052997,0.20350319,0.00069686596],"about_ca_topic_score_codex":0.0029861277,"about_ca_topic_score_gemma":0.0010691909,"teacher_disagreement_score":0.2287214,"about_ca_system_score_codex":0.000119095464,"about_ca_system_score_gemma":0.0000059145486,"threshold_uncertainty_score":0.9996934},"labels":[],"label_agreement":null},{"id":"W4411341406","doi":"10.1016/j.jhazmat.2025.138966","title":"Unraveling the resuspension and transformation of stranded oil: Mechanisms driving oil-particle aggregate formation in intertidal zones","year":2025,"lang":"en","type":"article","venue":"Journal of Hazardous Materials","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina; Concordia University","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Resources Canada; Natural Sciences and Engineering Research Council of Canada; Ministry of Natural Resources","keywords":"Intertidal zone; Particle (ecology); Environmental science; Aggregate (composite); Oceanography; Chemistry; Geology; Materials science; Nanotechnology","score_opus":0.008418673067257257,"score_gpt":0.2267520757781214,"score_spread":0.21833340271086416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411341406","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978099,0.000018066545,0.0006884738,0.0010628944,0.00020982289,0.00006105688,0.0000037039958,0.000003887843,0.0001421786],"genre_scores_gemma":[0.9992626,0.00020545544,0.0003971012,0.00008463775,0.000010941993,7.7703544e-7,0.0000011955925,0.0000029304292,0.000034393626],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989264,0.00010609425,0.0006358416,0.00005895825,0.00016773396,0.00010495768],"domain_scores_gemma":[0.9995166,0.00003294104,0.00033712402,0.00006195333,0.000022983453,0.000028383593],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00091908756,0.00006995609,0.0001713446,0.000053553464,0.000049776063,0.00005029482,0.000100923215,0.000043874188,0.00016072116],"category_scores_gemma":[0.00007026102,0.00004476257,0.000029374834,0.00010889728,0.000044880348,0.00034620205,0.000033102006,0.000054824508,0.000004690469],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013406794,0.0000214451,0.0001612032,0.00003248484,0.00000490454,0.0000020228192,0.0010391655,0.00008818286,0.99097246,0.00009017365,0.000033850993,0.007420064],"study_design_scores_gemma":[0.00071226276,0.000052871233,0.0050690374,0.0002662607,0.0000138888945,0.000024292194,0.00039110458,0.00038639826,0.9924769,0.00048548446,0.000073748124,0.000047769234],"about_ca_topic_score_codex":0.000032917946,"about_ca_topic_score_gemma":0.00016381164,"teacher_disagreement_score":0.0073722946,"about_ca_system_score_codex":0.000049074035,"about_ca_system_score_gemma":0.000010804522,"threshold_uncertainty_score":0.18253648},"labels":[],"label_agreement":null},{"id":"W4411617358","doi":"10.51847/q4imqjg","title":"10.51847/Q4IMqjg","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Isolation (microbiology); Bacteria; Characterization (materials science); Microbiology; Biology; Biotechnology; Environmental science; Pulp and paper industry; Materials science; Engineering; Nanotechnology; Genetics","score_opus":0.004210316475886052,"score_gpt":0.16035634106400362,"score_spread":0.15614602458811758,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411617358","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03437539,0.0000029039034,1.3552264e-7,0.00029270322,0.0000021487044,0.00009356932,0.000009663292,0.000047590158,0.9651759],"genre_scores_gemma":[0.0045412695,3.6425476e-7,0.0001095703,0.00025585463,0.000026724625,0.0000013093152,0.000006785326,0.0000061734117,0.9950519],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994532,0.000015073491,0.00008889018,0.00015260243,0.00013030689,0.0001599143],"domain_scores_gemma":[0.9997356,0.0000070394512,0.000012825541,0.00013037895,0.000002233578,0.00011191927],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000070978276,0.000069043745,0.00006042446,0.0000110856045,0.000040703162,0.000016874928,0.000136027,0.000034213095,0.99956286],"category_scores_gemma":[0.000008304382,0.0000597266,0.000024332981,0.0001411526,0.000032464846,0.000056978835,0.00003755852,0.00003290966,0.99839956],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018418967,0.00002598248,0.000008473712,4.5089138e-7,0.0000016260863,0.0000015119296,0.000011440618,0.000033656055,0.018768432,6.728832e-8,0.12405203,0.8570779],"study_design_scores_gemma":[0.00008809095,0.000036125854,0.001120513,0.0000016286709,0.0000021603369,0.0000017889394,2.1484271e-7,0.00004128699,0.0009708003,4.4930013e-7,0.9976441,0.00009280416],"about_ca_topic_score_codex":0.000029314155,"about_ca_topic_score_gemma":7.2934216e-7,"teacher_disagreement_score":0.8735921,"about_ca_system_score_codex":0.00003967433,"about_ca_system_score_gemma":0.0000029718658,"threshold_uncertainty_score":0.243558},"labels":[],"label_agreement":null},{"id":"W4411658817","doi":"10.51847/ua3ibdqhvo","title":"10.51847/UA3iBDqhVo","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"King Abdulaziz University","keywords":"Isolation (microbiology); Identification (biology); Soil water; Streptomyces; Characterization (materials science); Biology; Botany; Environmental science; Microbiology; Materials science; Soil science; Bacteria; Nanotechnology; Genetics","score_opus":0.004217528257251545,"score_gpt":0.16056707440291934,"score_spread":0.1563495461456678,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411658817","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.033529088,0.0000027702606,1.5812371e-7,0.00030579383,0.0000023536454,0.00009885675,0.000011287543,0.00005284833,0.96599686],"genre_scores_gemma":[0.0050001848,3.236694e-7,0.000112669055,0.00029003026,0.00002875331,0.000001470669,0.0000073330134,0.000006763566,0.9945525],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994154,0.000016552698,0.00009702115,0.00016317892,0.00013731595,0.00017052126],"domain_scores_gemma":[0.9997178,0.0000076825345,0.000013854974,0.00013964744,0.0000024367114,0.00011861859],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000078613324,0.00007400399,0.00006391447,0.0000120510795,0.00004489134,0.000017978111,0.00014669106,0.000036209694,0.9996164],"category_scores_gemma":[0.000009175591,0.00006494002,0.000026164362,0.00015023384,0.000034089342,0.000062060404,0.00004032212,0.0000351966,0.9983661],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020574005,0.000029953515,0.0000103533475,4.8889723e-7,0.0000018341628,0.0000016730266,0.000012785555,0.00003850758,0.01641239,8.521909e-8,0.14397773,0.83949363],"study_design_scores_gemma":[0.000097675365,0.00003961182,0.0012500053,0.0000017703867,0.0000024074045,0.0000018288367,2.5226035e-7,0.000044506105,0.00086940714,5.6366105e-7,0.9975913,0.000100668076],"about_ca_topic_score_codex":0.000030956926,"about_ca_topic_score_gemma":8.3797556e-7,"teacher_disagreement_score":0.85361356,"about_ca_system_score_codex":0.000041978976,"about_ca_system_score_gemma":0.000003241523,"threshold_uncertainty_score":0.2648177},"labels":[],"label_agreement":null},{"id":"W4411932682","doi":"10.1016/j.jenvman.2025.126426","title":"Enhanced biodegradation of crude oil by phosphate-solubilizing bacteria Bacillus subtilis PSB-1: Overcoming soluble phosphorus deficiency","year":2025,"lang":"en","type":"article","venue":"Journal of Environmental Management","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Zhejiang Province Public Welfare Technology Application Research Project","keywords":"Bacillus subtilis; Biodegradation; Phosphorus; Phosphate; Phosphate solubilizing bacteria; Crude oil; Bacteria; Bacillales; Chemistry; Microbiology; Food science; Biotechnology; Environmental chemistry; Pulp and paper industry; Biology; Rhizobacteria; Biochemistry; Organic chemistry; Rhizosphere; Petroleum engineering; Engineering","score_opus":0.005109459407794067,"score_gpt":0.20023752673509568,"score_spread":0.19512806732730162,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411932682","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899271,0.00069155,0.0010255378,0.00017100251,0.0006720624,0.0001569614,0.000029442574,0.000010087691,0.0073162564],"genre_scores_gemma":[0.9915808,0.0024890483,0.0021569512,0.00024825375,0.000013407006,0.0000026309333,0.000014976109,0.000012683858,0.0034812929],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979603,0.000056045104,0.00082922156,0.00029641937,0.00053965714,0.00031830306],"domain_scores_gemma":[0.99899983,0.00003012554,0.0006192579,0.00024532553,0.000006592412,0.00009888826],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00046869987,0.00022530255,0.00030162963,0.000105007195,0.0001184787,0.000041267103,0.00040826524,0.00007992946,0.0026890147],"category_scores_gemma":[0.000015774396,0.00020448814,0.00015436327,0.00026012262,0.00017747855,0.0003840107,0.00032297202,0.0001381126,0.00009360773],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001217477,0.00043818876,0.0062696757,0.00003929515,0.000051657684,0.000004513303,0.00014232601,0.00009294985,0.9299802,0.000025025754,0.0047640577,0.058070373],"study_design_scores_gemma":[0.0017612984,0.00019828811,0.052733943,0.00013025176,0.00012584585,0.000004569768,0.00072179385,0.00009234637,0.90698665,0.00006389805,0.0368674,0.00031370312],"about_ca_topic_score_codex":0.000047491172,"about_ca_topic_score_gemma":0.000009512569,"teacher_disagreement_score":0.05775667,"about_ca_system_score_codex":0.00058285537,"about_ca_system_score_gemma":0.000009617188,"threshold_uncertainty_score":0.99822265},"labels":[],"label_agreement":null},{"id":"W4412372067","doi":"10.1002/ldr.70046","title":"Insights Into the Declined Efficacy of In Situ Deep Soil Benzene Biostimulation: An Investigation Across Four Sites Over Three Years","year":2025,"lang":"en","type":"article","venue":"Land Degradation and Development","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Inner Mongolia Agricultural University; AgResearch","keywords":"Biostimulation; In situ; Environmental science; Environmental chemistry; Chemistry; Contamination; Biology; Ecology; Bioremediation; Organic chemistry","score_opus":0.019226724296968575,"score_gpt":0.2545956029134262,"score_spread":0.2353688786164576,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412372067","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988335,0.000040438917,0.00053889543,0.00023008641,0.000055357206,0.00016842062,8.2023655e-7,0.000012894605,0.00011958628],"genre_scores_gemma":[0.99723005,0.000020528129,0.0022020277,0.00039872303,0.000007880055,0.0000031593547,0.000077768535,0.0000029045502,0.000056961668],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992786,0.000035911275,0.00026042224,0.00017676518,0.00015569646,0.00009257076],"domain_scores_gemma":[0.9997089,0.000056813475,0.00007703009,0.00010150723,0.0000130736125,0.000042660013],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017411035,0.00008242937,0.00009048671,0.00004508025,0.000102814476,0.000034361045,0.00008199264,0.000057962196,0.000063369975],"category_scores_gemma":[0.000036351168,0.000057994348,0.000011302371,0.00029284807,0.00006745442,0.00014090126,0.00007298894,0.000046287572,0.000016237373],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038423575,0.000043277778,0.912545,0.0000066487196,0.0000065426793,6.353826e-7,0.0043239538,0.00040570163,0.046984207,0.000055047876,0.00005688621,0.035533644],"study_design_scores_gemma":[0.00073176087,0.0000124134285,0.9778324,0.000012796988,0.0000027464148,1.7971904e-7,0.00008510068,0.0017395791,0.018363096,0.00031389244,0.00082769175,0.00007838894],"about_ca_topic_score_codex":0.00023537801,"about_ca_topic_score_gemma":0.032121256,"teacher_disagreement_score":0.06528732,"about_ca_system_score_codex":0.000055339282,"about_ca_system_score_gemma":0.000030521373,"threshold_uncertainty_score":0.98554003},"labels":[],"label_agreement":null},{"id":"W4412834080","doi":"10.2139/ssrn.5369733","title":"Advanced Treatment of Sugarcane Vinasse Via Hybrid Photocatalytic Sequencing Batch Biofilm Reactor (Hp-Sbbr): A Combined Physicochemical and Biological Approach","year":2025,"lang":"en","type":"preprint","venue":"SSRN Electronic Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Quest University Canada","funders":"","keywords":"Vinasse; Biofilm; Photocatalysis; Pulp and paper industry; Sequencing batch reactor; Chemistry; Bioreactor; Waste management; Environmental science; Food science; Wastewater; Environmental engineering; Biology; Catalysis; Bacteria; Organic chemistry; Engineering","score_opus":0.013023344040827297,"score_gpt":0.23365236297068487,"score_spread":0.22062901892985756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412834080","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99705523,0.00061767735,0.00063539395,0.00015586363,0.00014987541,0.0007085073,0.000087398446,0.000034660035,0.0005553722],"genre_scores_gemma":[0.99202764,0.006631432,0.0006453708,0.000045379616,0.00007442043,0.000019084557,0.00017739325,0.000017236514,0.00036205718],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968723,0.00012896907,0.00058834796,0.00069390313,0.000316402,0.0014000527],"domain_scores_gemma":[0.99887776,0.00006639138,0.0004920149,0.00035879426,0.000031515297,0.00017350212],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005201679,0.00046347803,0.0006766276,0.000084726526,0.00009902974,0.000039615745,0.00041739794,0.00025797324,0.00011499693],"category_scores_gemma":[0.00004425456,0.00035299078,0.00024255792,0.00018698529,0.00029101287,0.00008167072,0.00037094537,0.0012561481,0.000015163337],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039375306,0.00062556367,0.0038665906,0.000050352446,0.00024166427,0.000007931012,0.00022503379,0.00006928981,0.9783103,0.00013228985,0.000058214442,0.016019057],"study_design_scores_gemma":[0.0074333143,0.0041479715,0.0036726147,0.00029790134,0.0004912528,0.0007716483,0.001217584,0.00503376,0.9460466,0.027909884,0.0009894428,0.0019880442],"about_ca_topic_score_codex":0.00043528603,"about_ca_topic_score_gemma":0.00012034575,"teacher_disagreement_score":0.032263678,"about_ca_system_score_codex":0.003761985,"about_ca_system_score_gemma":0.00086499215,"threshold_uncertainty_score":0.99989223},"labels":[],"label_agreement":null},{"id":"W4413272211","doi":"10.1016/j.jclepro.2025.146206","title":"Enhancing styrene biodegradation: Synergistic ABA-plant-bacteria strategy for intelligent bioremediation","year":2025,"lang":"en","type":"article","venue":"Journal of Cleaner Production","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; McGill University","funders":"","keywords":"Bioremediation; Biodegradation; Styrene; Bacteria; Biochemical engineering; Chemistry; Biotechnology; Biology; Engineering; Organic chemistry; Polymer","score_opus":0.017935833443039267,"score_gpt":0.2580691423417637,"score_spread":0.24013330889872445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413272211","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9830594,0.000040954248,0.01183316,0.0015662246,0.0028595042,0.00035891117,0.000016117992,0.000017739121,0.00024799723],"genre_scores_gemma":[0.9966676,0.00008674922,0.0016605566,0.000100706486,0.00047512766,0.0000027310957,0.000038528535,0.0000069674043,0.00096103724],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988441,0.00004865498,0.00055522186,0.00018606654,0.00021767487,0.00014830598],"domain_scores_gemma":[0.99926907,0.00003396977,0.0004355362,0.00011670809,0.00009017967,0.00005453204],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064842665,0.00011043461,0.0001556046,0.000120116354,0.000093938615,0.000047181617,0.00012395342,0.00006878671,0.00033378226],"category_scores_gemma":[0.00025118398,0.000089485016,0.00006951082,0.00022153876,0.000054813445,0.0002993029,0.000022046903,0.000102984915,0.00003406617],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016031043,0.000092060254,0.0015384024,0.00003425465,0.000025360194,9.915525e-7,0.00010555893,0.0015890613,0.9561071,0.000040800544,0.010615217,0.02969091],"study_design_scores_gemma":[0.0003297723,0.00016621721,0.011251635,0.00004737608,0.000055425124,0.000016290176,0.00021074053,0.00017493576,0.9542125,0.00025854982,0.03314829,0.00012829065],"about_ca_topic_score_codex":0.000017531382,"about_ca_topic_score_gemma":0.00011564131,"teacher_disagreement_score":0.02956262,"about_ca_system_score_codex":0.00020511688,"about_ca_system_score_gemma":0.000047665682,"threshold_uncertainty_score":0.36546817},"labels":[],"label_agreement":null},{"id":"W4413573226","doi":"10.64628/aam.fd6wjnpcc","title":"How engineered bacteria could clean up oilsands pollution and mining waste","year":2021,"lang":"en","type":"preprint","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Clean-up; Waste management; Pollution; Environmental science; Clean technology; Engineering; Chemistry; Biology; Ecology","score_opus":0.01439564411540894,"score_gpt":0.2076615057291937,"score_spread":0.19326586161378476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413573226","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955964,0.00003316848,0.00030840418,0.0012114171,0.00089920504,0.00014156215,0.000049404374,0.000053598953,0.001706842],"genre_scores_gemma":[0.9916418,0.00018570319,0.0028506727,0.00030231924,0.000086302105,0.0000024322212,0.00015388176,0.000013901284,0.0047629736],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989157,0.000036996873,0.00017526893,0.00045445873,0.00019887647,0.00021873105],"domain_scores_gemma":[0.9995141,0.0000097280035,0.00009699044,0.00023524344,0.000009544873,0.00013436643],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014307616,0.00021489926,0.00020550808,0.00003129445,0.00005755253,0.00028120287,0.00013898441,0.00027397982,0.002713933],"category_scores_gemma":[0.000033786924,0.00019033755,0.0000580949,0.00008667645,0.00007379159,0.00012506542,0.0006503132,0.00019650969,0.00002722588],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014044785,0.00002406202,0.0025362263,0.00004172656,0.000022079832,0.0000063856423,0.0005863794,0.00007928033,0.9752737,0.000005584478,0.007027105,0.014383396],"study_design_scores_gemma":[0.0021073185,0.00013248638,0.14276235,0.0003079174,0.00014067945,0.00004557702,0.0064309333,0.010479693,0.8096218,0.000033792654,0.025652135,0.00228532],"about_ca_topic_score_codex":0.000082089085,"about_ca_topic_score_gemma":0.00024220195,"teacher_disagreement_score":0.16565193,"about_ca_system_score_codex":0.0001077882,"about_ca_system_score_gemma":0.000019219648,"threshold_uncertainty_score":0.99819773},"labels":[],"label_agreement":null},{"id":"W4413878191","doi":"10.1007/s42452-025-07531-y","title":"Optimization of biosurfactant production by Pseudomonas aeruginosa strain Pa using rubber tree seed oil as sole carbon source","year":2025,"lang":"en","type":"article","venue":"Discover Applied Sciences","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"European Commission","keywords":"Pseudomonas aeruginosa; Strain (injury); Natural rubber; Carbon source; Pulp and paper industry; Microbiology; Tree (set theory); Pseudomonas; Food science; Chemistry; Biology; Mathematics; Bacteria; Engineering; Organic chemistry; Biochemistry","score_opus":0.00828678462706508,"score_gpt":0.22679243205360766,"score_spread":0.21850564742654258,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413878191","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9685907,0.000025201283,0.0011336417,0.0003545512,0.00023103195,0.00019190375,0.00003058597,0.000033219254,0.029409202],"genre_scores_gemma":[0.9965705,0.000024491183,0.0017903703,0.00016582312,0.000018736368,0.0000037599734,0.000020212401,0.0000068650556,0.0013992392],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983196,0.00004279425,0.0003220808,0.00053205865,0.00048975606,0.00029366784],"domain_scores_gemma":[0.9995261,0.000022683802,0.00019452917,0.00018597324,0.000012453358,0.000058285146],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046530933,0.00017683058,0.00018148855,0.000074757314,0.000219404,0.00007480926,0.00029102864,0.00008099665,0.00020778857],"category_scores_gemma":[0.0000333284,0.00014437288,0.000045550416,0.00091714313,0.00067047647,0.00022110427,0.00012220416,0.00007872763,0.00001583906],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002255247,0.00008441884,0.010770675,0.000009773665,0.0000070300616,1.6869846e-7,0.00029108324,0.05289165,0.93362933,0.00006703054,0.0002735064,0.001952797],"study_design_scores_gemma":[0.00051235384,0.000054179163,0.0040517743,0.0000401684,0.00003462868,0.0000022518473,0.0013667718,0.024265038,0.9681956,0.00016414923,0.00091631844,0.00039676367],"about_ca_topic_score_codex":0.00053988514,"about_ca_topic_score_gemma":0.00010914123,"teacher_disagreement_score":0.034566287,"about_ca_system_score_codex":0.00011312302,"about_ca_system_score_gemma":0.000086152606,"threshold_uncertainty_score":0.5887355},"labels":[],"label_agreement":null},{"id":"W4414014444","doi":"10.1099/mic.0.001604","title":"Microbial Primer: Biosurfactants – the ABCs of microbial surface-active metabolites","year":2025,"lang":"en","type":"review","venue":"Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Microbial ecology; Biology; Bacteria; Amphiphile; Microorganism; Supramolecular chemistry; Archaea; Chemistry; Computational biology; Biochemistry; Microbiology; Organic chemistry; Genetics; Molecule","score_opus":0.017620180752643336,"score_gpt":0.2706841974864579,"score_spread":0.25306401673381457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414014444","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0051203654,0.98299515,0.000007806287,0.0001222818,0.0019619775,0.002146539,0.005305361,0.00008040638,0.0022601252],"genre_scores_gemma":[0.00049331674,0.99470997,0.00061204843,0.0003351321,0.00010917928,0.000012828919,0.0009502026,0.00006154531,0.0027157865],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9954102,0.00092950324,0.0015103663,0.0011227396,0.00014063885,0.0008865775],"domain_scores_gemma":[0.9970944,0.00054752285,0.0012215776,0.0009643934,0.00005760661,0.00011452042],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00061289064,0.0009612342,0.0025812378,0.00015144047,0.00023339422,0.0000425907,0.0016982175,0.0010542014,0.0039464077],"category_scores_gemma":[0.00015126851,0.0006193664,0.0009890759,0.0010922768,0.0013473834,0.000099479075,0.0011066571,0.00073430676,0.0016423578],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000066729495,0.00026967627,0.00010412749,0.0021769744,0.0005473691,0.000007790818,0.00019153144,0.0000032360338,0.7627323,0.000031207466,0.033557493,0.20031151],"study_design_scores_gemma":[0.00034355614,0.000052926214,0.000036314006,0.0009526952,0.00065275526,0.000073847325,0.000015441203,2.69447e-7,0.038310137,0.0000065128506,0.9589629,0.0005926404],"about_ca_topic_score_codex":0.00031759922,"about_ca_topic_score_gemma":0.00020399192,"teacher_disagreement_score":0.9254054,"about_ca_system_score_codex":0.00031882743,"about_ca_system_score_gemma":0.0003726913,"threshold_uncertainty_score":0.99962574},"labels":[],"label_agreement":null},{"id":"W4414555997","doi":"10.1021/acs.est.5c06941","title":"Photodegradation Driven by Visible Light Exceeds Biodegradation across a Range of Environmental Conditions during the Initial Hours after an Oil Spill","year":2025,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Bedford Institute of Oceanography","funders":"Fisheries and Oceans Canada; Government of Canada","keywords":"Photodegradation; Abiotic component; Biodegradation; Oil spill; Degradation (telecommunications); Aquatic ecosystem; Pollutant; Microbial biodegradation","score_opus":0.004347178502185415,"score_gpt":0.2354321055089527,"score_spread":0.23108492700676728,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414555997","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976374,0.00007181891,0.000040160765,0.0006599593,0.0001607906,0.00028015155,0.00046637777,0.00006765868,0.0006156936],"genre_scores_gemma":[0.9989146,0.00012613776,0.00016373085,0.0002195657,0.00001331882,0.00005153955,0.0000613332,0.000011899259,0.00043785834],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978864,0.000054689135,0.00038468317,0.0006323288,0.0005193207,0.0005225872],"domain_scores_gemma":[0.9991801,0.000014047277,0.00019825557,0.0005067239,0.0000030348185,0.00009785078],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003321326,0.00023580632,0.00018566036,0.0002071512,0.0006443191,0.000053986674,0.0007986926,0.00020329322,0.0021296924],"category_scores_gemma":[0.000019070338,0.00019114187,0.000064678665,0.0010062493,0.0033886984,0.00060616876,0.00056024967,0.00023400233,0.00022471591],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025350444,0.000199921,0.17090455,0.0000024533447,0.0000059487675,0.0000018475483,0.00027813145,0.000019754343,0.8253266,0.000013200345,0.00006389454,0.0031583249],"study_design_scores_gemma":[0.0005174687,0.000090076544,0.39047945,0.000012196709,0.000015822567,0.0000089570085,0.0010713725,0.00010127408,0.60599244,0.000053092946,0.0014583399,0.00019950469],"about_ca_topic_score_codex":0.00006168086,"about_ca_topic_score_gemma":0.00009060344,"teacher_disagreement_score":0.2195749,"about_ca_system_score_codex":0.0006097615,"about_ca_system_score_gemma":0.000019184083,"threshold_uncertainty_score":0.9993235},"labels":[],"label_agreement":null},{"id":"W4415269598","doi":"10.1111/1758-2229.70218","title":"Transcriptomic Analyses Unveil Hydrocarbon Degradation Mechanisms in a Novel Polar <i>Rhodococcus</i> sp. Strain R1B_2T From a High Arctic Intertidal Zone Exposed to Ultra‐Low Sulphur Fuel Oil","year":2025,"lang":"en","type":"article","venue":"Environmental Microbiology Reports","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"National Research Council Canada; McGill University","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Resources Canada; Fisheries and Oceans Canada; Polar Knowledge Canada","keywords":"Bioremediation; AlkB; Arctic; Rhodococcus; Biostimulation; Degradation (telecommunications); Transcriptome; Microcosm; Biodegradation; Strain (injury)","score_opus":0.009689618822999844,"score_gpt":0.21874557473948464,"score_spread":0.2090559559164848,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415269598","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959224,0.00008964336,0.0014206269,0.00057942676,0.000598534,0.00046342023,0.0007064399,0.00005795187,0.00016159487],"genre_scores_gemma":[0.99302363,0.000043538632,0.0022829107,0.0021171959,0.000025890753,0.00003182854,0.0016194442,0.000031787164,0.00082375563],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967699,0.00018056628,0.001045524,0.0012033873,0.00017621035,0.00062441925],"domain_scores_gemma":[0.9989058,0.00006299643,0.0003129111,0.0005326014,0.0000036688493,0.00018206054],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00038931202,0.0004868738,0.0005468385,0.00020670435,0.000100255784,0.00004065419,0.0003309094,0.00034116782,0.0022206055],"category_scores_gemma":[0.00004176402,0.00047114262,0.00017510886,0.00039710375,0.0002757736,0.00019640822,0.00017311232,0.0003316639,0.00023806143],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001242943,0.00052196044,0.035692923,0.000012605575,0.00006254068,0.00008769866,0.00047706006,0.00012803731,0.96186066,0.0000030104438,0.000121781086,0.0009074258],"study_design_scores_gemma":[0.0013670833,0.00013054408,0.110277645,0.000086289525,0.00007344543,0.000100963465,0.00029097273,0.000030135268,0.88583887,0.00014233732,0.0011187028,0.00054301287],"about_ca_topic_score_codex":0.002652268,"about_ca_topic_score_gemma":0.0040095956,"teacher_disagreement_score":0.0760218,"about_ca_system_score_codex":0.0010726441,"about_ca_system_score_gemma":0.000049238613,"threshold_uncertainty_score":0.99977404},"labels":[],"label_agreement":null},{"id":"W4415847061","doi":"10.1007/s10822-025-00692-3","title":"Elucidating ligand recognition of reductive dehalogenases: the role of hydrophobic active site in organohalogen binding","year":2025,"lang":"en","type":"article","venue":"Journal of Computer-Aided Molecular Design","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Kensington Health","funders":"","keywords":"Solvation; Ligand (biochemistry); Molecular dynamics; Reactivity (psychology); Hydrogen bond; Active site; van der Waals force; Binding site","score_opus":0.008396123269113686,"score_gpt":0.21473718432258385,"score_spread":0.20634106105347017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415847061","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9739412,0.00008998772,0.025349675,0.00006632831,0.000107914675,0.00022696733,0.000007980185,0.0000029533335,0.00020701482],"genre_scores_gemma":[0.9906914,0.00003837054,0.009156271,0.00007753449,0.000020134377,8.416631e-7,0.0000034388459,0.0000069524986,0.000005057235],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985988,0.00029935458,0.00057099183,0.00014252488,0.00024460722,0.00014369402],"domain_scores_gemma":[0.9989529,0.00015160507,0.0006594172,0.00012533547,0.00007180109,0.00003889398],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063716894,0.00011565305,0.00025670513,0.00016665462,0.000040199095,0.000014888762,0.0002448163,0.00007006732,0.000046452285],"category_scores_gemma":[0.00007719793,0.0000872311,0.00010084387,0.0005627311,0.000104369676,0.00013075779,0.00009229038,0.00016834207,0.0000087745675],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010988438,0.00009255714,0.0009661903,0.0000071529926,0.00004807744,0.000015202794,0.0006771672,0.0020301424,0.98091006,0.000004167002,0.00005731494,0.015082098],"study_design_scores_gemma":[0.0004906649,0.00020053599,0.0031567719,0.00015802245,0.000040062972,0.000023661534,0.0001847379,0.00083954097,0.9940119,0.0007778742,0.00003688049,0.00007938923],"about_ca_topic_score_codex":0.000031159027,"about_ca_topic_score_gemma":0.000005384888,"teacher_disagreement_score":0.01675022,"about_ca_system_score_codex":0.00012291396,"about_ca_system_score_gemma":0.00006783871,"threshold_uncertainty_score":0.3557181},"labels":[],"label_agreement":null},{"id":"W4415907389","doi":"10.1007/978-3-031-96212-7_10","title":"Biorestoration of Polycyclic Aromatic Hydrocarbon- and Heavy Metal-Contaminated Soil: The Role of Vermitechnology","year":2025,"lang":"en","type":"book-chapter","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Soil contamination; Heavy metals; Abiotic component; Microorganism; Microbial biodegradation; Contamination; Pollution; Polycyclic aromatic hydrocarbon; Biomass (ecology)","score_opus":0.004522987052750941,"score_gpt":0.1825334484941388,"score_spread":0.17801046144138785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415907389","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47218922,0.0010043327,0.000017428369,0.00058422756,0.00014177951,0.000961921,0.000051055344,0.00007049657,0.52497953],"genre_scores_gemma":[0.9518097,0.00022647694,0.00006896983,0.00008862322,0.0000055552146,0.0000025694287,0.00002530842,0.000009277622,0.047763497],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99914616,0.000018158316,0.00036017498,0.00020706585,0.00016703847,0.00010139653],"domain_scores_gemma":[0.99937415,0.00004227393,0.00028778194,0.00026655375,0.0000036428376,0.00002561227],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010214441,0.00016578844,0.0002796745,0.000085288455,0.000031491774,0.000005336105,0.00018836446,0.00027495748,0.00040699347],"category_scores_gemma":[0.000019839128,0.00011159053,0.000062513864,0.00007020288,0.00043836888,0.000039502043,0.00014477261,0.00011963121,0.000039446342],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007864403,0.000079268444,0.003875841,0.00005186675,0.00017158092,0.0000021792093,0.00020694862,0.0000028827599,0.92442083,0.012684067,0.0013519921,0.05707392],"study_design_scores_gemma":[0.0005535865,0.00028034998,0.0036351043,0.0001257379,0.0002747212,0.000009528406,0.00014014106,0.00087536965,0.92722964,0.017352674,0.049067758,0.0004553834],"about_ca_topic_score_codex":0.0003371362,"about_ca_topic_score_gemma":0.00064843975,"teacher_disagreement_score":0.4796205,"about_ca_system_score_codex":0.000039416776,"about_ca_system_score_gemma":0.000017007682,"threshold_uncertainty_score":0.45505297},"labels":[],"label_agreement":null},{"id":"W4415914111","doi":"10.1007/s00374-025-01961-x","title":"Enhanced bioremediation of α-terpineol-contaminated mining soil through immobilization of Indigenous biosurfactant-producing bacteria on biochar","year":2025,"lang":"en","type":"article","venue":"Biology and Fertility of Soils","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Anthropology Society; Basic and Applied Basic Research Foundation of Guangdong Province; National Natural Science Foundation of China","keywords":"Bioremediation; Biochar; Environmental remediation; Rhamnolipid; Biostimulation; Soil contamination; Microbial population biology; Soil remediation; Bioaugmentation","score_opus":0.01119424720904226,"score_gpt":0.25117857421880024,"score_spread":0.23998432700975797,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415914111","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99884135,0.000106453124,0.00024484977,0.00006946515,0.00018610181,0.0002498082,0.000080104,0.000013475201,0.0002083844],"genre_scores_gemma":[0.99943614,0.00012423778,0.00026356458,0.0000675332,0.000005678485,0.0000022041202,0.00007972467,0.0000031160912,0.000017799306],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988378,0.00009555199,0.00051157566,0.00031548747,0.00007786899,0.00016165836],"domain_scores_gemma":[0.9993255,0.00007368549,0.0003310029,0.00020107867,0.000043348107,0.00002537356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033926938,0.0001297656,0.00030202532,0.00006528328,0.000053544034,0.0000030066706,0.0001175071,0.00019274943,0.00020123382],"category_scores_gemma":[0.00016067483,0.000110535715,0.000044941393,0.00025755638,0.00041759934,0.000078778765,0.0000676019,0.000052861033,0.000006807777],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025470267,0.00011736015,0.118943565,0.000059595826,0.000020312471,7.1369676e-8,0.0014528913,0.000009667185,0.8740737,0.0000119221195,0.0000115051025,0.005044746],"study_design_scores_gemma":[0.00024816566,0.00014486343,0.4134031,0.000037433958,0.000009839774,9.574387e-8,0.000079097714,0.000022374958,0.5859253,0.000068628164,0.0000086512,0.000052465708],"about_ca_topic_score_codex":0.00034140892,"about_ca_topic_score_gemma":0.00014251591,"teacher_disagreement_score":0.29445955,"about_ca_system_score_codex":0.000034780198,"about_ca_system_score_gemma":0.00002850952,"threshold_uncertainty_score":0.45075157},"labels":[],"label_agreement":null},{"id":"W4415929971","doi":"10.1016/j.jece.2025.120131","title":"Biodegradation of mixed polycyclic aromatic hydrocarbons by newly isolated Priestia megaterium KS01 and its enzymatic pathway profiling","year":2025,"lang":"en","type":"article","venue":"Journal of environmental chemical engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; York University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biodegradation; Bioremediation; Bacillus megaterium; Hydrocarbon; Diesel fuel; Polycyclic aromatic hydrocarbon; Bioavailability; Fluorene","score_opus":0.002951604763676948,"score_gpt":0.16797178845928848,"score_spread":0.16502018369561153,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415929971","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99848366,0.0003352194,0.0007861152,0.00010274389,0.0001080246,0.00011561444,0.000011986098,0.000011152062,0.000045464312],"genre_scores_gemma":[0.9980181,0.000057243837,0.0018191068,0.00003032458,0.000012360236,0.0000011456436,0.000011264097,0.00001079284,0.0000396895],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989238,0.000017433153,0.00053423375,0.00013767154,0.00021703527,0.00016986713],"domain_scores_gemma":[0.9995298,0.000045487595,0.00023702564,0.00008210473,7.853135e-7,0.000104804756],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014134747,0.00015669134,0.00023631474,0.000058468013,0.000023151717,0.000014693314,0.00013856424,0.00009356411,0.00004475928],"category_scores_gemma":[0.00006126942,0.00013833612,0.000058288064,0.00014070985,0.000060149367,0.00017836347,0.000081201586,0.00015953754,0.0000072458192],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020544809,0.00007211994,0.0017153498,0.000023827664,0.000026033085,0.0000017912254,0.000048075584,0.000071495604,0.99750245,0.000001765889,0.00006334929,0.00045321402],"study_design_scores_gemma":[0.0004806516,0.000053340806,0.0027260112,0.000081136706,0.000032486452,0.000020183143,0.000024647763,0.009420189,0.9868801,0.000018678209,0.00013506704,0.0001274552],"about_ca_topic_score_codex":0.0000030326378,"about_ca_topic_score_gemma":1.694966e-7,"teacher_disagreement_score":0.01062228,"about_ca_system_score_codex":0.00015554551,"about_ca_system_score_gemma":0.000008060652,"threshold_uncertainty_score":0.5641184},"labels":[],"label_agreement":null},{"id":"W4416104501","doi":"10.1021/acsestwater.5c00552","title":"From Legacy to Emerging Groundwater Contaminants: Combining Advanced Monitoring Tools to Assess Sources and In Situ (Bio)Transformation","year":2025,"lang":"en","type":"article","venue":"ACS ES&T Water","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Polytechnique Montréal","funders":"École Nationale du Génie de l'Eau et de l'Environnement de Strasbourg; Université de Strasbourg","keywords":"Groundwater; Aquifer; Environmental remediation; Remedial action; Groundwater remediation; Groundwater contamination; Contamination; Groundwater pollution","score_opus":0.017691057924813104,"score_gpt":0.2591687184151625,"score_spread":0.24147766049034938,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416104501","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99714935,0.0000052700716,0.0003580218,0.0010963083,0.00026765576,0.00045540018,0.0000041429294,0.000026407875,0.0006374346],"genre_scores_gemma":[0.998677,0.0000063875714,0.0004976087,0.00055530085,0.000025026964,0.000026447717,0.000018312438,0.000006985942,0.00018690943],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99904233,0.000034011173,0.0002507953,0.00025828028,0.00013748812,0.00027710502],"domain_scores_gemma":[0.9997577,0.00002762072,0.000022323853,0.00011446613,0.000007944264,0.00006991738],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017329372,0.00012939013,0.00014152237,0.000073067524,0.00009157543,0.00018060603,0.00013859481,0.00005620611,0.00012345111],"category_scores_gemma":[0.000015591042,0.00009745988,0.000016224592,0.00014383552,0.000022259905,0.00080185337,0.00015377866,0.00007945667,0.00020174103],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046553814,0.000021698554,0.055552453,0.0000062674035,0.0000044212065,0.0000021133721,0.0054328735,0.00012304174,0.92259014,0.0000030986062,0.000067572415,0.016149763],"study_design_scores_gemma":[0.0005323883,0.00002560324,0.16913694,0.00009024763,0.0000050833205,3.118646e-7,0.0011598305,0.000014604415,0.8231559,0.000042136824,0.0056847716,0.00015218854],"about_ca_topic_score_codex":0.00042895623,"about_ca_topic_score_gemma":0.00039646696,"teacher_disagreement_score":0.11358449,"about_ca_system_score_codex":0.000099079705,"about_ca_system_score_gemma":0.0000029810546,"threshold_uncertainty_score":0.39742985},"labels":[],"label_agreement":null},{"id":"W4416111365","doi":"10.1021/acsestengg.5c00615","title":"The Impact of Biostimulation Agents on Diesel-Degrading Microbes in Cold-Regions Soils Has Seasonal Specificity","year":2025,"lang":"en","type":"article","venue":"ACS ES&T Engineering","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Hydro-Québec","keywords":"Biostimulation; Microcosm; Bioremediation; Hydrocarbon; Alkane; Soil water; Bacteria; Total petroleum hydrocarbon; Diesel fuel","score_opus":0.01659650157800791,"score_gpt":0.24625004902560405,"score_spread":0.22965354744759614,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416111365","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99869406,0.000039317147,0.0002936239,0.00018775556,0.00012162467,0.00014815749,0.000014399993,0.00002155022,0.00047952062],"genre_scores_gemma":[0.9996644,0.000044009157,0.00012221343,0.000022535502,0.000014010777,0.0000020950179,0.0000057981006,0.000005894215,0.000119042765],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993515,0.000014238779,0.00018241823,0.00014209046,0.00011579363,0.00019393367],"domain_scores_gemma":[0.99968165,0.000100772035,0.0000450199,0.00013030838,0.0000069215707,0.000035336965],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015132679,0.00010898445,0.000100261255,0.000056231198,0.000086248125,0.000035640398,0.00014901256,0.000049667124,0.000057573572],"category_scores_gemma":[0.00007578396,0.00007953918,0.00005678987,0.00035466757,0.000053601212,0.000070513226,0.000058933085,0.000096186646,0.000029981322],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020537405,0.00005908299,0.07883649,0.0000074812833,0.00002029558,0.0000013500334,0.00015550946,0.1499413,0.7667056,0.0003343075,0.0029612044,0.00095684803],"study_design_scores_gemma":[0.00044434302,0.000042623244,0.8003586,0.00011574336,0.0000070317924,6.239032e-7,0.000030574538,0.05227602,0.14356512,0.00003204729,0.0029528753,0.00017442505],"about_ca_topic_score_codex":0.00015901706,"about_ca_topic_score_gemma":0.000100145175,"teacher_disagreement_score":0.7215221,"about_ca_system_score_codex":0.00025080628,"about_ca_system_score_gemma":0.000013335307,"threshold_uncertainty_score":0.32435137},"labels":[],"label_agreement":null},{"id":"W4416241234","doi":"10.1007/978-3-032-00098-9_52","title":"Agricultural Soil Remediation and Its Tangible Relation with Food Security in Qatar: A Short Review","year":2025,"lang":"en","type":"book-chapter","venue":"World sustainability series","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"","keywords":"Environmental remediation; Bioremediation; Pollutant; Biochar; Food security; Agriculture; Soil contamination; Soil quality; Soil health","score_opus":0.005595600550533059,"score_gpt":0.20264159363578008,"score_spread":0.197045993085247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416241234","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.29352328,0.019247966,0.00000805931,0.026752384,0.00051464763,0.012005141,0.0004681759,0.00041281717,0.64706755],"genre_scores_gemma":[0.67848897,0.0059392713,0.00008402785,0.0005350528,0.00005953693,0.0000471467,0.00043427307,0.000025486874,0.31438622],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983574,0.00005980872,0.00044334115,0.0005538428,0.0003304798,0.00025508678],"domain_scores_gemma":[0.999369,0.00004276765,0.00014932976,0.0002567195,0.000098957804,0.00008318911],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041987433,0.00031420498,0.0003928825,0.0000926072,0.00010371876,0.00003559908,0.00013314316,0.00017190815,0.00062562624],"category_scores_gemma":[0.00015298699,0.00024339855,0.00006117925,0.00027530547,0.00018275084,0.0004361364,0.00018156714,0.00033576367,0.00001714557],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003248531,0.0011508345,0.38272935,0.061677027,0.0006619755,0.0002704758,0.014024972,0.00041052996,0.003029665,0.25653327,0.22577171,0.050491665],"study_design_scores_gemma":[0.0012131954,0.0009200626,0.18695126,0.00513233,0.0004135692,0.00003327658,0.00090056943,0.000056311546,0.0016233835,0.034446016,0.76555634,0.002753706],"about_ca_topic_score_codex":0.0000558684,"about_ca_topic_score_gemma":0.020843606,"teacher_disagreement_score":0.5397846,"about_ca_system_score_codex":0.000919529,"about_ca_system_score_gemma":0.00009756406,"threshold_uncertainty_score":0.99702346},"labels":[],"label_agreement":null},{"id":"W4416276081","doi":"10.1016/j.scitotenv.2025.180929","title":"Methanogenic biodegradation of cyclohexane by microbial consortia from oil sands tailings","year":2025,"lang":"en","type":"article","venue":"The Science of The Total Environment","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Genome Alberta; University of Alberta; Syncrude; Institute for Oil Sands Innovation, University of Alberta; Genome Canada","keywords":"Biodegradation; Cyclohexane; Tailings; Oil sands; Methane; Methanogenesis; Enrichment culture; Microbial biodegradation","score_opus":0.00497731535917729,"score_gpt":0.19522184704431766,"score_spread":0.19024453168514038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416276081","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99659616,0.00008650037,0.00003710279,0.001365444,0.00023300025,0.00012911572,0.00008167414,0.0000064419683,0.0014645801],"genre_scores_gemma":[0.996627,0.000064676264,0.00031528572,0.00008884342,0.000007107337,0.0000020230189,0.0000054920993,0.0000036673853,0.0028859046],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998605,0.00007011467,0.00032588714,0.00029347843,0.0004943501,0.0002111453],"domain_scores_gemma":[0.99916804,0.00004989985,0.0002477427,0.00048551356,0.0000053451568,0.00004347171],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00062370236,0.0001224919,0.0001454071,0.000027516808,0.00018962986,0.000016108046,0.0008441258,0.000046799607,0.0013569676],"category_scores_gemma":[0.000052998053,0.000070886286,0.00008926526,0.00040225056,0.0023987724,0.00011120883,0.0005679451,0.000089664754,0.00006465301],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017669383,0.00006310823,0.00034062722,0.0000022648692,0.000009838953,3.9723158e-8,0.0001428596,0.0005953574,0.99595845,0.000012876457,0.0010535762,0.0018033129],"study_design_scores_gemma":[0.00023629433,0.000020396219,0.012035033,0.000013872397,0.0000351532,6.951983e-7,0.000062720435,0.00033280576,0.9863367,0.00011396343,0.00072945334,0.00008289142],"about_ca_topic_score_codex":0.0006069812,"about_ca_topic_score_gemma":0.000006565842,"teacher_disagreement_score":0.011694406,"about_ca_system_score_codex":0.00015316808,"about_ca_system_score_gemma":0.000034421704,"threshold_uncertainty_score":0.99955595},"labels":[],"label_agreement":null},{"id":"W4416391750","doi":"10.1016/j.biombioe.2025.108659","title":"Environmental sustainability of digestate-derived Rhamnolipids: Life cycle assessment approach","year":2025,"lang":"en","type":"article","venue":"Biomass and Bioenergy","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Research Grants Council, University Grants Committee","keywords":"Digestate; Life-cycle assessment; Raw material; Sustainability; Bioprocess; Production (economics); Biofuel; Biomass (ecology)","score_opus":0.004547971217331202,"score_gpt":0.21899126757295606,"score_spread":0.21444329635562487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416391750","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940879,0.00007017094,0.0004644887,0.00047645316,0.00008756043,0.00016762443,0.000040738174,0.000022522243,0.004582565],"genre_scores_gemma":[0.99876934,0.00011287484,0.0005935519,0.00017592753,0.00001307188,0.000006435576,0.000029527158,0.0000053775507,0.00029387645],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989476,0.000061446735,0.0002646024,0.00033603725,0.00016966608,0.00022063142],"domain_scores_gemma":[0.99957836,0.00001918036,0.00009133602,0.00019672708,0.000006360737,0.000108043496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016578667,0.00014420717,0.00017696228,0.000043786436,0.0000906255,0.000022549728,0.00014069089,0.0000908684,0.00034686824],"category_scores_gemma":[0.000017661696,0.000114548835,0.00005390938,0.00018176874,0.00038771715,0.00007870654,0.00024928112,0.000045794623,0.00000544556],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004375147,0.00047397555,0.17084944,0.00005467305,0.000033944805,0.0000013585341,0.00009054946,0.000059041806,0.8133619,0.00048716937,0.00067927514,0.013864951],"study_design_scores_gemma":[0.0007946825,0.00010613185,0.9041087,0.0000076159004,0.000023462138,0.0000013477355,0.0006756181,0.0014647224,0.07884954,0.000297128,0.013407625,0.00026339642],"about_ca_topic_score_codex":0.00053763844,"about_ca_topic_score_gemma":0.00003512074,"teacher_disagreement_score":0.7345123,"about_ca_system_score_codex":0.00015714031,"about_ca_system_score_gemma":0.000037078156,"threshold_uncertainty_score":0.4671166},"labels":[],"label_agreement":null},{"id":"W4416422400","doi":"10.3390/w17223327","title":"Freshwater Phenanthrene Removal by Three Emergent Wetland Plants","year":2025,"lang":"en","type":"article","venue":"Water","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba; International Institute for Sustainable Development","funders":"Natural Sciences and Engineering Research Council of Canada; Mitacs; Canadian Association of Petroleum Producers; Genome Canada","keywords":"Microcosm; Phenanthrene; Typha; Wetland; Carex; Environmental remediation; Aquatic plant","score_opus":0.005961865978527703,"score_gpt":0.2037890898046528,"score_spread":0.19782722382612508,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416422400","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9880723,0.000028835293,0.00008052155,0.0017875495,0.0004798479,0.00012163709,0.00006645853,0.00003468874,0.009328183],"genre_scores_gemma":[0.9842539,0.000038056427,0.00020839508,0.001064864,0.00003282956,0.000002920653,0.00011873638,0.0000074698264,0.014272823],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99916524,0.000016663838,0.00016043904,0.00023258294,0.00014587422,0.0002792195],"domain_scores_gemma":[0.99975634,0.0000036441825,0.00001729582,0.00016265457,0.0000029976484,0.00005707104],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000100064346,0.000110334266,0.000093712944,0.000018779703,0.00008118361,0.000026008585,0.00016158128,0.00006474288,0.019238763],"category_scores_gemma":[0.0000026855294,0.00006356615,0.000034770826,0.000047607773,0.00006570203,0.000070692666,0.00014911116,0.000057282297,0.0035286844],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018659644,0.000029162267,0.022344043,0.0000021076962,0.0000075353278,0.0000052226574,0.000060076618,0.0000027751971,0.70226085,0.000001995017,0.27361855,0.0016490357],"study_design_scores_gemma":[0.00023659575,0.000008372568,0.0040699984,0.000004211753,0.0000038451567,0.0000017669141,0.0000045443408,0.000045746412,0.5329182,0.00012089927,0.4624998,0.00008599796],"about_ca_topic_score_codex":0.0002802733,"about_ca_topic_score_gemma":0.0018809773,"teacher_disagreement_score":0.18888122,"about_ca_system_score_codex":0.00004272051,"about_ca_system_score_gemma":0.000002616188,"threshold_uncertainty_score":0.99724716},"labels":[],"label_agreement":null},{"id":"W4416905628","doi":"10.1002/ael2.70043","title":"Impact of soil texture on biosurfactant‐mediated soil wetting and water retention","year":2025,"lang":"en","type":"article","venue":"Agricultural & Environmental Letters","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Kansas State University; National Science Foundation","keywords":"Loam; Soil texture; Water retention; Soil water; Texture (cosmology); Wetting; Amendment","score_opus":0.003464533259771292,"score_gpt":0.1841868698128496,"score_spread":0.18072233655307832,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416905628","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99724454,0.000016879418,0.0000028609293,0.001607019,0.000109365676,0.00022799829,0.000069813665,0.000029240535,0.00069229427],"genre_scores_gemma":[0.998307,0.000052900075,0.000032358043,0.0009985305,0.000022096421,0.0000029525002,0.00020874788,0.000007838904,0.00036759733],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986569,0.00006197548,0.00029982414,0.00038549618,0.0002608799,0.00033492513],"domain_scores_gemma":[0.99962586,0.00003073852,0.00010733231,0.00014568391,0.0000018913156,0.000088489964],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000110407556,0.00025419582,0.0001975026,0.00003997822,0.00013189716,0.000029666446,0.0001430861,0.000111522866,0.0010657995],"category_scores_gemma":[0.00000951133,0.00013816103,0.00014119592,0.00012853857,0.00023317088,0.00019389647,0.00015978592,0.00016159017,0.00033031293],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003050641,0.00006941013,0.11925955,0.0000050989324,0.00003359314,0.0000025679192,0.00012328527,0.0002052205,0.8753813,9.112944e-7,0.003929708,0.0009588561],"study_design_scores_gemma":[0.00043187544,0.00008892681,0.7829934,0.000021927275,0.00002202657,0.000004513192,0.00007364841,0.000041388656,0.21587856,0.0000029618564,0.00025785874,0.00018291509],"about_ca_topic_score_codex":0.00017566611,"about_ca_topic_score_gemma":0.000025410556,"teacher_disagreement_score":0.66373384,"about_ca_system_score_codex":0.00028509044,"about_ca_system_score_gemma":0.0000020750442,"threshold_uncertainty_score":0.99984735},"labels":[],"label_agreement":null},{"id":"W4417062554","doi":"10.1139/cjm-2025-0241","title":"Characterization and antifungal properties against <i>Botrytis cinerea</i> of bacteria isolated from hemp seed oil","year":2025,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Ste. Anne's Hospital; McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bacteria; Antifungal; Isolation (microbiology); Antimicrobial; Polymyxin; Pathogen","score_opus":0.005748926755119363,"score_gpt":0.16726612538941293,"score_spread":0.16151719863429356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417062554","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99819434,0.00014993444,0.000029619434,0.0006801089,0.0004241472,0.000041367897,0.00024981957,0.000002890159,0.00022776795],"genre_scores_gemma":[0.9983394,0.00013459314,0.00011154965,0.00080857176,0.000027081636,1.8616637e-7,0.00008515314,0.000005118604,0.0004883427],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992445,0.00007138194,0.00036107228,0.00012679213,0.00002396017,0.00017227944],"domain_scores_gemma":[0.9995019,0.000012572075,0.000230555,0.00008221369,0.000039699415,0.00013309275],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001158914,0.00010191048,0.00022214159,0.00009618419,0.000057451824,0.000019271187,0.00015094277,0.0001251567,0.0006083003],"category_scores_gemma":[0.000036669142,0.00008260913,0.00003616347,0.0001401142,0.000246908,0.00009208894,0.00002843568,0.000105086256,0.000016477401],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003739159,0.000008449132,0.05634644,0.0000070890787,0.00002470253,0.0000066846874,0.00016770499,0.0000016881943,0.9396079,0.0000012793851,0.0008480876,0.002942562],"study_design_scores_gemma":[0.00084400753,0.000095539915,0.23354857,0.00014736838,0.000032398642,0.000053096395,0.000072207076,0.000027042222,0.72330683,0.0000051115194,0.041695233,0.00017257525],"about_ca_topic_score_codex":0.0020464119,"about_ca_topic_score_gemma":0.009158803,"teacher_disagreement_score":0.21630107,"about_ca_system_score_codex":0.00008116455,"about_ca_system_score_gemma":0.0001724437,"threshold_uncertainty_score":0.6660462},"labels":[],"label_agreement":null},{"id":"W4417224283","doi":"10.1016/j.watres.2025.125155","title":"Wood oil biodegradation in the marine environment: Behavior, mechanism, and impact","year":2025,"lang":"en","type":"article","venue":"Water Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Devon Energy (Canada); Natural Resources Canada","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Natural Resources Canada; Canada Foundation for Innovation","keywords":"Biodegradation; Marine snow; Dispersant; Biomass (ecology); Benthic zone; Oil spill; Mineralization (soil science); Petroleum","score_opus":0.0303867310223218,"score_gpt":0.31060984395251645,"score_spread":0.28022311293019464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417224283","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99369335,0.000008374188,0.0000047649714,0.0015601803,0.000019649704,0.00015220641,0.000006231041,0.0000056165495,0.0045496114],"genre_scores_gemma":[0.9970699,0.00012815771,0.000056294764,0.0001087613,0.0000064840197,0.000017994993,0.000027108757,0.0000032358066,0.0025820513],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989169,0.00017674708,0.00010894674,0.00019799771,0.00031889734,0.00028050307],"domain_scores_gemma":[0.99976254,0.000014239974,0.00000838777,0.00017608516,0.0000032860582,0.00003546076],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011044851,0.00006727309,0.00005613929,0.00008114582,0.00011331688,0.00006562999,0.00020083867,0.000049116912,0.0030308869],"category_scores_gemma":[0.000010930727,0.00003499845,0.000017291863,0.00018931413,0.00012559214,0.00008335433,0.00034396606,0.00017411473,0.000513038],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026485735,0.00014833557,0.0870956,0.0000062742342,0.0000034571856,0.000009735093,0.000693703,0.000002306093,0.8800891,0.00014627175,0.001024514,0.030754235],"study_design_scores_gemma":[0.0010183549,0.00016787283,0.6082606,0.000014087668,0.000010584655,0.000008053908,0.0003861199,0.0002257706,0.3655551,0.0034953023,0.020639246,0.00021892422],"about_ca_topic_score_codex":0.0011016729,"about_ca_topic_score_gemma":0.00028578783,"teacher_disagreement_score":0.52116495,"about_ca_system_score_codex":0.00012265317,"about_ca_system_score_gemma":0.000005329529,"threshold_uncertainty_score":0.99788046},"labels":[],"label_agreement":null},{"id":"W4417419452","doi":"10.1016/j.molliq.2025.129143","title":"Environmental implications of sulfolane demixing from water by phenolic co-contaminants","year":2025,"lang":"en","type":"article","venue":"Journal of Molecular Liquids","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Shell Canada","keywords":"Sulfolane; Phenols; Aqueous solution; Ternary operation; Resorcinol","score_opus":0.0034937849030635725,"score_gpt":0.21820429137049416,"score_spread":0.2147105064674306,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417419452","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99643934,0.00022140077,0.0013797188,0.0006305306,0.00008784521,0.000074924414,0.00006972229,0.0000036737877,0.0010928357],"genre_scores_gemma":[0.9985646,0.000115268,0.0004749577,0.0006407015,0.000014941435,6.426761e-7,0.00002470596,0.0000068768927,0.0001573179],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99900377,0.000056528803,0.0004414277,0.00012681099,0.00020837752,0.00016306672],"domain_scores_gemma":[0.9995614,0.000020670943,0.00018077741,0.00015560671,0.000008009824,0.00007350573],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00019774276,0.00010196542,0.00018497213,0.000045684556,0.000043511245,0.000009033872,0.0002628271,0.000104314626,0.0012447181],"category_scores_gemma":[0.000016171814,0.00007590666,0.000095754076,0.00007152825,0.00009935606,0.000091284666,0.00008180186,0.0001516701,0.000072219],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031409076,0.00009326862,0.028033704,0.0000020327097,0.000034805704,0.000004721112,0.00011495167,0.0000104551455,0.9648327,0.0000041182643,0.004682202,0.002155627],"study_design_scores_gemma":[0.000471905,0.000072526556,0.042345073,0.000017234723,0.000036057252,0.0000063571806,0.000033486616,0.0000059872273,0.9459329,0.00012628696,0.010872611,0.00007956092],"about_ca_topic_score_codex":0.000037278103,"about_ca_topic_score_gemma":0.0000046126706,"teacher_disagreement_score":0.018899795,"about_ca_system_score_codex":0.000112837064,"about_ca_system_score_gemma":0.000012820103,"threshold_uncertainty_score":0.9996683},"labels":[],"label_agreement":null},{"id":"W4417432623","doi":"10.1002/jeq2.70114","title":"Analysis into the viability of pea gravel as a diffusing material for biostimulation systems in petroleum hydrocarbon‐contaminated soils","year":2025,"lang":"en","type":"article","venue":"Journal of Environmental Quality","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Federated Co-operatives (Canada); University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bioremediation; Biostimulation; Biodegradation; Nutrient; Soil water; Hydrocarbon; Nitrate; Petroleum; Contamination","score_opus":0.008900741935467199,"score_gpt":0.2656990391575147,"score_spread":0.2567982972220475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417432623","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983058,0.000042339718,0.00073366694,0.00023314997,0.00023300464,0.00029274067,0.000058234953,0.000003026959,0.00009806743],"genre_scores_gemma":[0.9996614,0.000018995852,0.00013545403,0.000077817975,0.000024436435,0.0000026416676,0.000018331199,0.0000046572914,0.000056279867],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99791944,0.00034236597,0.0010306495,0.00019403675,0.00035069155,0.00016279181],"domain_scores_gemma":[0.9988573,0.00017510222,0.00070811313,0.00019990372,0.000007739638,0.000051833158],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018928688,0.00013560787,0.00039551654,0.00012225923,0.00007615032,0.000028205135,0.00022574158,0.000091695096,0.0002775141],"category_scores_gemma":[0.00011063197,0.00009597929,0.0002193088,0.00030612358,0.0002177202,0.00013885605,0.00009567935,0.00011035539,0.000005048867],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031556332,0.00029196063,0.3305695,0.000027993165,0.000109611356,9.762516e-7,0.00053778547,0.0039719436,0.663187,0.00002059494,0.000014841444,0.0009521865],"study_design_scores_gemma":[0.0010049664,0.00011451098,0.96065587,0.000023792141,0.00020443356,0.0000016564213,0.0007094732,0.006616048,0.030107448,0.0002230774,0.00022036566,0.00011837777],"about_ca_topic_score_codex":0.0011078755,"about_ca_topic_score_gemma":0.00024103081,"teacher_disagreement_score":0.6330796,"about_ca_system_score_codex":0.00051679014,"about_ca_system_score_gemma":0.000017356073,"threshold_uncertainty_score":0.39139217},"labels":[],"label_agreement":null},{"id":"W44510291","doi":"10.1007/978-1-4419-5979-9_5","title":"Microbial Biosurfactants and Biodegradation","year":2010,"lang":"en","type":"review","venue":"Advances in experimental medicine and biology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":68,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Biodegradation; Chemistry; Microbiology; Biology; Organic chemistry","score_opus":0.03996104462543839,"score_gpt":0.36631664551621346,"score_spread":0.3263556008907751,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W44510291","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0054642474,0.9923669,0.0000018908879,0.00008005983,0.00060696306,0.00037822215,0.000029371902,0.000016423874,0.001055889],"genre_scores_gemma":[0.0027535874,0.99640054,0.00033436573,0.0002022886,0.00011026595,0.000011826506,0.00013086245,0.000013759934,0.000042522894],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985879,0.000092969516,0.00045782502,0.0005378945,0.00006541043,0.0002579883],"domain_scores_gemma":[0.99946004,0.00008798187,0.0002092513,0.00013939243,0.000003106633,0.00010023365],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017575016,0.00032629498,0.00077344954,0.000102013684,0.000059146543,0.000008225782,0.00014673591,0.0003590526,0.00066710805],"category_scores_gemma":[0.000041313895,0.00021214104,0.00003903353,0.00019645794,0.0009471635,0.00014706576,0.00018568324,0.00028394855,0.00004985779],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008168508,0.00003870834,0.00065181486,0.00015991743,0.0000043898667,0.0000030068568,0.00010646398,7.343198e-9,0.03119227,0.00003993755,0.00014468926,0.96765065],"study_design_scores_gemma":[0.00037877975,0.00019537254,0.000034686334,0.0005422108,0.000024326675,0.000050638857,0.00006470359,0.000001019701,0.0007973398,0.000038668175,0.99762356,0.00024871444],"about_ca_topic_score_codex":0.00009102751,"about_ca_topic_score_gemma":0.0001733631,"teacher_disagreement_score":0.99747884,"about_ca_system_score_codex":0.00006043966,"about_ca_system_score_gemma":0.000010773938,"threshold_uncertainty_score":0.865086},"labels":[],"label_agreement":null},{"id":"W5910154","doi":"10.1007/978-3-662-05794-0_8","title":"Remediation of Organic Pollutants Through Natural Attenuation","year":2004,"lang":"en","type":"book-chapter","venue":"Soil biology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Natural (archaeology); Attenuation; Pollutant; Environmental remediation; Environmental science; Contamination; Human health; Environmental chemistry; Environmental engineering; Waste management; Geology; Environmental health; Chemistry; Engineering; Ecology; Biology; Physics","score_opus":0.012408297217551151,"score_gpt":0.22403769497571396,"score_spread":0.2116293977581628,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W5910154","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1941648,0.0009385182,0.00016078664,0.0024198603,0.0052728895,0.0013047326,0.00095262984,0.00021640405,0.7945694],"genre_scores_gemma":[0.96678376,0.0004487444,0.00020837385,0.00043972678,0.0001479821,8.501436e-7,0.00032060457,0.00002490079,0.031625044],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9988688,0.00002459603,0.0003829787,0.00035489304,0.00017205428,0.00019664265],"domain_scores_gemma":[0.99927384,0.000026306987,0.00041869373,0.00021989705,0.000023001188,0.00003826479],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00012307112,0.0002184877,0.00028995427,0.00004046721,0.000043983186,0.0000046926607,0.00019972501,0.00047714065,0.010679396],"category_scores_gemma":[0.000051804032,0.00018658019,0.00009143482,0.00005721801,0.00029711478,0.000072415365,0.000113480375,0.00020669603,0.0017703077],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055291435,0.000035419514,0.0030576424,0.000024617655,0.00006299612,0.0000039377255,0.00038630443,0.000009362796,0.96818346,0.009427344,0.0018774947,0.016876116],"study_design_scores_gemma":[0.0061772643,0.0015647168,0.06483459,0.00048130835,0.0004764625,0.000069827016,0.0000941015,0.00006732464,0.32938886,0.3346566,0.25792173,0.0042672246],"about_ca_topic_score_codex":0.000070665075,"about_ca_topic_score_gemma":0.00061597576,"teacher_disagreement_score":0.77261895,"about_ca_system_score_codex":0.00027029577,"about_ca_system_score_gemma":0.00005276408,"threshold_uncertainty_score":0.9990069},"labels":[],"label_agreement":null},{"id":"W595523098","doi":"10.1201/b12224","title":"Environmental Chemistry","year":2011,"lang":"en","type":"book","venue":"Apple Academic Press eBooks","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Environmental chemistry; Chemistry; Environmental science","score_opus":0.019587015226472736,"score_gpt":0.20538477937380312,"score_spread":0.18579776414733037,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W595523098","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012948684,0.00023565245,0.000008007363,0.000007658141,0.00014621363,0.00041446195,0.00040039513,0.000100231286,0.99739254],"genre_scores_gemma":[0.006048348,0.0003523156,0.00007464989,0.0004694015,0.0002688494,0.00002419486,0.00025137546,0.000065433334,0.9924454],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980687,0.000022643128,0.00041964714,0.0006410939,0.00042495487,0.00042299577],"domain_scores_gemma":[0.9989934,0.000023296854,0.00031590264,0.00044307215,0.0000016755761,0.00022263755],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00014658312,0.00041668268,0.00029958063,0.0000133914955,0.000074509735,0.000012944852,0.0008218036,0.0010983659,0.010710594],"category_scores_gemma":[0.000006610558,0.0004035139,0.00012711089,0.000006605689,0.00043015435,0.000056831683,0.0007251919,0.0010930238,0.0025593091],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029646464,0.0000247146,0.00012155301,0.000044143857,0.00004712006,0.000015002057,0.0005228853,8.0249777e-7,0.26150864,0.0001347605,0.72106785,0.016482875],"study_design_scores_gemma":[0.00020736277,0.000009150812,0.000042641717,0.000026035868,0.00004169909,0.000013056527,0.000005043763,0.0000042268352,0.078152396,0.00040858766,0.9206428,0.00044697846],"about_ca_topic_score_codex":0.00004774021,"about_ca_topic_score_gemma":0.0000024598985,"teacher_disagreement_score":0.19957498,"about_ca_system_score_codex":0.00034601358,"about_ca_system_score_gemma":0.00003436366,"threshold_uncertainty_score":0.9998417},"labels":[],"label_agreement":null},{"id":"W609440396","doi":"10.1520/stp10262s","title":"Laboratory and Field Approaches to Characterize the Soil Ecotoxicology of Polynitro Explosives","year":2000,"lang":"en","type":"book-chapter","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Department of National Defence; Defence Research and Development Canada","funders":"","keywords":"Explosive material; Ecotoxicology; Field (mathematics); Environmental science; Environmental chemistry; Chemistry; Geography; Archaeology; Mathematics","score_opus":0.04597641070173121,"score_gpt":0.19148660002315745,"score_spread":0.14551018932142623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W609440396","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20692879,0.000083036466,0.0000051010893,0.0041798465,0.00013228352,0.0005750563,0.00020018013,0.000029137873,0.7878666],"genre_scores_gemma":[0.6000658,0.0012004646,0.00039210482,0.014648827,0.00019823239,0.000019637058,0.000049634407,0.000054513977,0.3833708],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992837,0.000018551762,0.0001998081,0.00024427663,0.00012294202,0.00013074021],"domain_scores_gemma":[0.99956995,0.000056195666,0.00009494591,0.0001987453,0.0000047568615,0.00007543008],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008539491,0.0001637717,0.00019335741,0.000028057266,0.00004406681,0.000012979697,0.00018164457,0.00019701978,0.018444385],"category_scores_gemma":[0.000011239072,0.00010647633,0.000034686796,0.000030444398,0.00017598184,0.000044087275,0.000136095,0.00012595586,0.00043075279],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002576151,0.00012554384,0.0019334836,0.000053443848,0.000118605734,0.000009540362,0.0018803959,0.0000038085095,0.8722279,0.007819204,0.051844914,0.063725546],"study_design_scores_gemma":[0.00032858277,0.0004139877,0.00584344,0.000042379233,0.00005216326,0.000007073883,0.00008536846,0.000008651846,0.2534326,0.00093654485,0.73821336,0.00063582824],"about_ca_topic_score_codex":0.000030171454,"about_ca_topic_score_gemma":0.00023428016,"teacher_disagreement_score":0.68636847,"about_ca_system_score_codex":0.000020862859,"about_ca_system_score_gemma":0.000015220339,"threshold_uncertainty_score":0.98245287},"labels":[],"label_agreement":null},{"id":"W61112338","doi":"","title":"Biostimulation of Oil Refinery Soils","year":2014,"lang":"en","type":"article","venue":"Scholarship@Western (Western University)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Biostimulation; Refinery; Environmental science; Soil water; Oil refinery; Waste management; Petroleum engineering; Geology; Engineering; Environmental engineering; Soil science; Bioremediation","score_opus":0.054722014664940345,"score_gpt":0.27488704913817175,"score_spread":0.2201650344732314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W61112338","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968535,0.0000051343645,0.00023763429,0.00015307074,0.00014215185,0.000057199875,0.000015965992,0.000062159546,0.0024732172],"genre_scores_gemma":[0.9944547,0.000020361955,0.00010432924,0.00025415103,0.000034117023,9.918445e-8,0.000020860962,0.00001380653,0.0050975895],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99871206,0.00016110633,0.00022236536,0.0003419382,0.00030844953,0.0002540935],"domain_scores_gemma":[0.9992351,0.000056235665,0.00020178591,0.00032952923,0.00002903664,0.00014832233],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00033164502,0.00016877695,0.00019292126,0.00013235904,0.000095159514,0.000040571165,0.0003995086,0.00014604919,0.00039104684],"category_scores_gemma":[0.000053969346,0.0001729361,0.00008208286,0.00038776937,0.00015083032,0.00069159525,0.00024535914,0.00016273314,0.0009492274],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038777325,0.000050007486,0.89907366,0.000013778322,0.000007631752,0.0000048234465,0.00007325517,0.00013563294,0.09774451,0.000017024246,0.0000035635014,0.0028373303],"study_design_scores_gemma":[0.0006539911,0.000073677635,0.9623457,0.00003973077,0.000023797144,0.0000033417398,0.000019506373,0.0000044227013,0.03084608,0.000026528558,0.0057396116,0.00022360292],"about_ca_topic_score_codex":0.000010584518,"about_ca_topic_score_gemma":0.0007359607,"teacher_disagreement_score":0.066898435,"about_ca_system_score_codex":0.000119324,"about_ca_system_score_gemma":0.000013709908,"threshold_uncertainty_score":0.99982864},"labels":[],"label_agreement":null},{"id":"W66144093","doi":"10.1023/a:1011180231044","title":"Pyrene is metabolized to bound residues by Penicillium janthinellum SFU403","year":2000,"lang":"en","type":"article","venue":"Biodegradation","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Pyrene; Chemistry; Glutathione; Biochemistry; Radical; Oxidizing agent; Stereochemistry; Organic chemistry; Enzyme","score_opus":0.007857108137111702,"score_gpt":0.21939842452198202,"score_spread":0.2115413163848703,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W66144093","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98684335,0.000098141856,0.00008212066,0.0037590584,0.00015171633,0.00027031815,0.00014604804,0.0000701496,0.008579118],"genre_scores_gemma":[0.961465,0.00029797273,0.0015707051,0.003943382,0.00006784028,0.0000072523853,0.00023829508,0.000016861375,0.0323927],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987976,0.000047645917,0.00024404071,0.00034901677,0.00032052616,0.0002411959],"domain_scores_gemma":[0.9995511,0.000012131861,0.0000579296,0.0002310474,0.0000102478325,0.00013750923],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00018801083,0.0001481825,0.00013490036,0.000029728852,0.00013111356,0.00007342887,0.00019578666,0.0000816876,0.038749702],"category_scores_gemma":[0.000021733089,0.00012738215,0.00004743489,0.00032297906,0.00006418338,0.00022461357,0.000039457635,0.000057695248,0.008363169],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005113049,0.000060656766,0.003463292,0.0000017511692,0.0000063003463,5.025076e-7,0.0002618527,0.000005256416,0.6537476,0.000006891253,0.31152347,0.030871266],"study_design_scores_gemma":[0.00035278965,0.00003824993,0.020368816,0.0000039928786,0.0000134143565,0.00000112065,0.000019504507,0.00008765538,0.36703834,0.000051802894,0.6118039,0.00022044225],"about_ca_topic_score_codex":0.0010276266,"about_ca_topic_score_gemma":0.0003007937,"teacher_disagreement_score":0.3002804,"about_ca_system_score_codex":0.00008094107,"about_ca_system_score_gemma":0.000009851803,"threshold_uncertainty_score":0.99240893},"labels":[],"label_agreement":null},{"id":"W67790751","doi":"","title":"Évaluation, optimisation et comparaison des cellules et des colonnes de flottation afin de retirer des contaminants organiques de sédiments portuaires.","year":2001,"lang":"fr","type":"article","venue":"EspaceINRS Institutional Digital Repository (Institut National de la Recherche Scientifique)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Humanities; Chemistry; Political science; Philosophy","score_opus":0.14584241221303443,"score_gpt":0.35186340724995785,"score_spread":0.20602099503692342,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W67790751","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89058745,0.00092850195,0.04991143,0.0015388719,0.000590791,0.0006885789,0.00022941855,0.000159911,0.055365067],"genre_scores_gemma":[0.90725446,0.0015611965,0.07291245,0.000709821,0.00016040473,0.0000471593,0.00032964308,0.00004032962,0.016984567],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99348265,0.00265773,0.0008029525,0.0008398098,0.0013161671,0.00090071413],"domain_scores_gemma":[0.9967441,0.0012977079,0.00042388827,0.00024303673,0.00073624577,0.00055501075],"candidate_categories":["metaepi_narrow","sts","scholarly_communication"],"consensus_categories":["sts"],"category_scores_codex":[0.008665099,0.00050548755,0.00032730395,0.00028071585,0.0013611019,0.0012493078,0.0004971633,0.0008154157,0.00037388213],"category_scores_gemma":[0.007974278,0.00055585237,0.00020859679,0.0010610607,0.004295702,0.0030560333,0.00017652217,0.00070915476,0.00021569328],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036858168,0.002036357,0.28369394,0.00027420424,0.00015483635,0.00022730132,0.0133275995,0.07161346,0.575895,0.027433807,0.0072237314,0.017751167],"study_design_scores_gemma":[0.0015763917,0.0001898279,0.6440172,0.0013703008,0.00012043225,0.0015512275,0.0005746431,0.022136804,0.24092408,0.040055156,0.046400964,0.0010829706],"about_ca_topic_score_codex":0.0013898074,"about_ca_topic_score_gemma":0.0021857426,"teacher_disagreement_score":0.36032328,"about_ca_system_score_codex":0.011509047,"about_ca_system_score_gemma":0.0049164244,"threshold_uncertainty_score":0.99993896},"labels":[],"label_agreement":null},{"id":"W6884439078","doi":"10.1021/es404122y.s001","title":"Bioremediation\\nof Chlorinated Ethenes in Fractured\\nBedrock and Associated Changes in Dechlorinating and Nondechlorinating\\nMicrobial Populations","year":2016,"lang":"en","type":"article","venue":"Figshare","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Groundwater; Bioaugmentation; Bioremediation; Population; Carbonate; Vinyl chloride; Dehalococcoides; Sulfate","score_opus":0.030576973595550627,"score_gpt":0.24753961496676924,"score_spread":0.21696264137121862,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6884439078","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921465,0.000038498874,5.9262675e-7,0.0007640157,0.00006660676,0.00028248644,0.006414548,0.000048813432,0.00023794484],"genre_scores_gemma":[0.9978719,0.00002083785,0.000105567786,0.00013839798,0.000034751865,0.000031382373,0.0016748233,0.000015007323,0.0001073763],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988409,0.00005394168,0.00025754274,0.00036170564,0.00018060747,0.00030529997],"domain_scores_gemma":[0.9994854,0.00014424023,0.00015927166,0.000105062485,0.000020920214,0.00008514652],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016798958,0.00017326196,0.00017050482,0.0001382725,0.00007977764,0.000039499948,0.00011701146,0.00018013027,0.016564166],"category_scores_gemma":[0.0014104831,0.0001367364,0.000017389468,0.0004242183,0.000025564943,0.00026784508,0.00019810292,0.00012825732,0.00016406577],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033490167,0.00014413838,0.7001635,0.000047626414,0.000008491552,0.000021722835,0.001478482,0.000022835784,0.2645665,0.000016813898,0.00641728,0.027079139],"study_design_scores_gemma":[0.0009972407,0.000038053164,0.9698699,0.00044784663,0.0000027619376,0.0000029958642,0.000039453622,0.00017981592,0.025021577,0.000101159894,0.0030329397,0.00026624283],"about_ca_topic_score_codex":0.00015027556,"about_ca_topic_score_gemma":0.011023919,"teacher_disagreement_score":0.26970646,"about_ca_system_score_codex":0.000202164,"about_ca_system_score_gemma":0.000012209298,"threshold_uncertainty_score":0.9843348},"labels":[],"label_agreement":null},{"id":"W6884442457","doi":"10.1021/es801540h.s001","title":"Three Year Field Test of a Plant Growth Promoting Rhizobacteria Enhanced Phytoremediation System at a Land Farm for Treatment of Hydrocarbon Waste","year":2016,"lang":"en","type":"article","venue":"Figshare","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Phytoremediation; Rhizobacteria; Rhizosphere; Environmental remediation; Bioremediation; Biomass (ecology); Total petroleum hydrocarbon; Soil contamination","score_opus":0.014427553058015208,"score_gpt":0.20034032696459955,"score_spread":0.18591277390658434,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6884442457","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93111557,0.000007950147,0.000008582523,0.000042437394,0.00006255207,0.0006224986,0.06772054,0.0000233424,0.00039655765],"genre_scores_gemma":[0.99693716,0.0000031839058,0.000067843364,0.000006687338,0.0000529575,0.000048061094,0.0028292595,0.000007595639,0.00004724834],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99938756,0.000008313606,0.00019558413,0.00016136735,0.00011865889,0.00012851029],"domain_scores_gemma":[0.9994933,0.00013117415,0.00021262698,0.00010670618,0.000016307158,0.000039856855],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0000297353,0.0000909751,0.00014457843,0.000016070837,0.00002394683,0.0000041343396,0.00007877851,0.00005988385,0.005779009],"category_scores_gemma":[0.00018869301,0.00005730953,0.00004997844,0.000053926713,0.000006525599,0.000039548646,0.000038689315,0.000008036739,0.00014526675],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058419108,0.000054905922,0.013262855,0.00013414669,0.000008006392,4.4353737e-7,0.00016116454,2.2249726e-7,0.9827581,6.6279654e-7,0.0020561498,0.0015049017],"study_design_scores_gemma":[0.0007879382,0.000411495,0.008691534,0.00051789626,0.000007515565,8.2717474e-7,0.000010364553,0.000113090246,0.9887112,0.000002747568,0.00066427235,0.000081130696],"about_ca_topic_score_codex":0.000027776658,"about_ca_topic_score_gemma":0.00035124394,"teacher_disagreement_score":0.065821625,"about_ca_system_score_codex":0.00014877644,"about_ca_system_score_gemma":0.0000091998645,"threshold_uncertainty_score":0.9951298},"labels":[],"label_agreement":null},{"id":"W6891639607","doi":"10.48336/jzje-ew28","title":"Microbial responses to marine oil spills: impacts of salinity, dispersant application and oil properties","year":2023,"lang":"en","type":"article","venue":"Memorial University Research Repository (Memorial University)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Dispersant; Biodegradation; Petroleum; Petroleum product; Oil spill; Fuel oil; Rhamnolipid; Crude oil","score_opus":0.026892573375166623,"score_gpt":0.24623655848094475,"score_spread":0.21934398510577813,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6891639607","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9850415,0.0000038126207,0.000008477672,0.00046177465,0.0010364433,0.00022956461,0.0000637348,0.00010767225,0.013047036],"genre_scores_gemma":[0.9667233,0.00025822944,0.00013875346,0.000015610474,0.00059327495,2.8789466e-7,0.000024769308,0.000017092956,0.032228634],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971877,0.00063837826,0.00023214871,0.0006366427,0.00074943993,0.00055570056],"domain_scores_gemma":[0.99867237,0.00018380064,0.00012678823,0.00041454326,0.00016334244,0.00043918364],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009924982,0.00020854213,0.0002990629,0.00063563476,0.00069945963,0.000070384725,0.0007277425,0.00019651368,0.00014638684],"category_scores_gemma":[0.00029692793,0.00021800608,0.000100651436,0.0022197887,0.00074873934,0.00042774368,0.001858495,0.00029703477,0.00030764157],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0042095757,0.00012002774,0.009531228,0.00005997306,0.000034892153,0.00019434163,0.00083065464,0.000024099318,0.97602975,0.000120360644,0.005435193,0.0034099245],"study_design_scores_gemma":[0.006744072,0.0012327251,0.048438754,0.00018034957,0.00014827534,0.000039052444,0.0058701467,0.00035963606,0.4776715,0.000035423724,0.45809305,0.0011870401],"about_ca_topic_score_codex":0.0067505557,"about_ca_topic_score_gemma":0.0013894788,"teacher_disagreement_score":0.49835825,"about_ca_system_score_codex":0.00068041624,"about_ca_system_score_gemma":0.00020900751,"threshold_uncertainty_score":0.99986356},"labels":[],"label_agreement":null},{"id":"W6893546307","doi":"10.5281/zenodo.3541189","title":"NPA_ref3048","year":2019,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Natural (archaeology); Context (archaeology); Biogenesis; Term (time)","score_opus":0.015217390457645185,"score_gpt":0.20452170611206952,"score_spread":0.18930431565442432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6893546307","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46831414,0.0000073845003,0.00015264015,0.00054434617,0.00012654248,0.00030560108,0.000057240548,0.00037409374,0.53011805],"genre_scores_gemma":[0.9943317,0.000020035686,0.00015680587,0.0003306798,0.000036387075,3.0748168e-9,0.0003122493,0.00035845122,0.0044536972],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990343,0.000094426665,0.00012574118,0.00026705905,0.0002523613,0.00022611704],"domain_scores_gemma":[0.9995389,0.0000060561733,0.000050035298,0.0002594461,0.000035571473,0.00010999293],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003003561,0.000077744706,0.00006988502,0.000041178148,0.00051726424,0.0002102681,0.0005315524,0.00004203179,0.25566283],"category_scores_gemma":[0.00008460721,0.00007295471,0.00002980317,0.0002912822,0.00008388546,0.00016679092,0.00072897953,0.00011010885,0.22948238],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039913757,0.00011534787,0.000350674,0.000015796571,0.000012310548,0.0000042873335,0.00055274164,0.000054257092,0.4428443,0.00066642824,0.45850804,0.09683591],"study_design_scores_gemma":[0.00025266685,0.000074311574,0.0053059375,0.0000041274557,0.0000021438261,0.000018459614,0.00005394566,0.000114383016,0.0035245384,0.000034408895,0.9905111,0.000103984894],"about_ca_topic_score_codex":0.000011591809,"about_ca_topic_score_gemma":3.0245886e-7,"teacher_disagreement_score":0.53200305,"about_ca_system_score_codex":0.000116596704,"about_ca_system_score_gemma":5.8357807e-7,"threshold_uncertainty_score":0.77111757},"labels":[],"label_agreement":null},{"id":"W6903305189","doi":"10.1021/es4020184.s001","title":"Metagenomics of Hydrocarbon Resource Environments\\nIndicates Aerobic Taxa and Genes to be Unexpectedly Common","year":2015,"lang":"en","type":"article","venue":"Figshare","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Metagenomics; Anaerobic exercise; Bacteria; Archaea; Gene; Energy source; Methane; Coal; Resource (disambiguation)","score_opus":0.03760966430322277,"score_gpt":0.22775188889154643,"score_spread":0.19014222458832367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6903305189","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9818595,0.000249605,6.8075707e-7,0.00026230444,0.000020456344,0.0002940373,0.0141888475,0.00002544028,0.0030991156],"genre_scores_gemma":[0.99287415,0.000009311763,0.00027169913,0.0006442126,0.000019707542,0.000011386094,0.0057271747,0.000014698677,0.0004276587],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991696,0.000039602717,0.00018040999,0.00023367441,0.00020831173,0.00016838827],"domain_scores_gemma":[0.9994532,0.00002556542,0.00011901686,0.00019171585,0.000002892096,0.00020762415],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00006972957,0.0001200259,0.00014513236,0.000030141522,0.000036491947,0.00001774453,0.00020662436,0.00006925332,0.022138417],"category_scores_gemma":[0.00009393108,0.00010855791,0.000027016153,0.00013146517,0.000027760985,0.00006574101,0.00031054925,0.000056111185,0.0012631313],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043881624,0.00009695565,0.008982032,0.000019087936,0.000023907132,0.000006871556,0.0013551471,0.00033516416,0.6201095,0.00000154623,0.36443013,0.004595752],"study_design_scores_gemma":[0.00032477287,0.00011442167,0.020944875,0.000039891554,0.000012055599,0.0000041184658,0.00015958352,0.00010114285,0.25723562,0.000005633594,0.7208322,0.00022564523],"about_ca_topic_score_codex":0.000045817345,"about_ca_topic_score_gemma":0.00006618039,"teacher_disagreement_score":0.3628739,"about_ca_system_score_codex":0.00007074761,"about_ca_system_score_gemma":0.000007290721,"threshold_uncertainty_score":0.9995145},"labels":[],"label_agreement":null},{"id":"W6912194011","doi":"10.5281/zenodo.3541361","title":"NPA_ref949","year":2019,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Metabolite; Anaerobic exercise; Context (archaeology); Atlas (anatomy)","score_opus":0.015201528095443171,"score_gpt":0.20456245445795648,"score_spread":0.1893609263625133,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6912194011","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46256506,0.0000073467413,0.00015051787,0.0005671143,0.00012562863,0.0003032545,0.000058079702,0.00036871427,0.5358543],"genre_scores_gemma":[0.99426347,0.000019247464,0.00015459808,0.0003330685,0.00003606152,2.9063312e-9,0.00030866562,0.00035510465,0.004529799],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99904233,0.00009362538,0.00012455127,0.00026477393,0.000250551,0.00022417186],"domain_scores_gemma":[0.9995423,0.00000601574,0.000049535334,0.00025782376,0.000035359997,0.000108983986],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00029817977,0.00007697252,0.000069181726,0.000041254305,0.0005133053,0.00020928943,0.0005284422,0.000041614447,0.25822946],"category_scores_gemma":[0.00008423161,0.00007219964,0.000029470126,0.0002888351,0.00008313997,0.00016509152,0.00072431244,0.000109087814,0.2318071],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038649105,0.000112553374,0.00032579614,0.000015370504,0.000012061497,0.000004255132,0.0005537033,0.000053494256,0.44020134,0.00065282726,0.46345603,0.0945739],"study_design_scores_gemma":[0.00024989952,0.000072877614,0.0051730783,0.0000040748305,0.0000021322471,0.00001820242,0.0000537992,0.0001138635,0.0034857164,0.00003464077,0.9906888,0.00010292623],"about_ca_topic_score_codex":0.000011870889,"about_ca_topic_score_gemma":3.0820212e-7,"teacher_disagreement_score":0.5316984,"about_ca_system_score_codex":0.00011562616,"about_ca_system_score_gemma":5.742564e-7,"threshold_uncertainty_score":0.768791},"labels":[],"label_agreement":null},{"id":"W6920599026","doi":"10.6084/m9.figshare.12586646","title":"Additional file 1 of A novel C-terminal degron identified in bacterial aldehyde decarbonylases using directed evolution","year":2020,"lang":"en","type":"article","venue":"Open MIND","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Degron; Directed evolution; Thermostability; Docking (animal); Amino acid","score_opus":0.04877023992816273,"score_gpt":0.26172890941544014,"score_spread":0.2129586694872774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6920599026","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.889991,6.615418e-7,0.00000913148,0.000031401003,0.00004658196,0.00018589874,0.10792902,0.0000017939583,0.001804533],"genre_scores_gemma":[0.95755535,4.6423528e-7,0.024696792,0.00006495984,0.000067141285,0.000012378177,0.017240603,0.000009755477,0.0003525746],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99925077,0.00003081978,0.00021956515,0.00022450855,0.00015164343,0.00012267723],"domain_scores_gemma":[0.999655,0.00008089484,0.00012360334,0.00006629397,0.000007754274,0.0000664556],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000051162035,0.00007850003,0.00011651961,0.000020533786,0.000030405732,0.000036677404,0.00019498916,0.000050669863,0.91294247],"category_scores_gemma":[0.00022415526,0.0000776264,0.000026831714,0.0002222605,0.00006799983,0.00022617137,0.000188305,0.00004750313,0.0005082349],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009554327,0.00010924281,0.0004401941,0.0000019378085,0.0000033122365,0.0000049075215,0.00012379195,0.000029344297,0.8389517,1.8415773e-7,0.15799554,0.0022443032],"study_design_scores_gemma":[0.0041631106,0.00027586994,0.323596,0.00042649443,0.000047325433,0.000038239625,0.00029796315,0.038320076,0.23362607,0.000015682848,0.3982228,0.0009703578],"about_ca_topic_score_codex":0.0002192726,"about_ca_topic_score_gemma":0.00069164496,"teacher_disagreement_score":0.9124342,"about_ca_system_score_codex":0.00009533218,"about_ca_system_score_gemma":0.00004670311,"threshold_uncertainty_score":0.6532501},"labels":[],"label_agreement":null},{"id":"W6920604933","doi":"10.6084/m9.figshare.12586646.v1","title":"Additional file 1 of A novel C-terminal degron identified in bacterial aldehyde decarbonylases using directed evolution","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Degron; Directed evolution; Thermostability; Docking (animal); Amino acid","score_opus":0.044340455060005536,"score_gpt":0.22772384121037112,"score_spread":0.1833833861503656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6920604933","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05740247,0.0000014614084,5.170528e-7,0.000012910294,0.000021157379,0.000103201186,0.94205046,0.000024642319,0.00038316997],"genre_scores_gemma":[0.21514326,9.9245696e-8,0.0009304541,0.00008646309,0.00006672535,0.000026861071,0.78368783,0.000007865873,0.000050431863],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992977,0.000021835862,0.00018614427,0.0001902438,0.00017278793,0.00013127996],"domain_scores_gemma":[0.9996211,0.00012028346,0.00011910285,0.000059656657,0.0000121548765,0.00006770737],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000011616042,0.00008433573,0.00009858875,0.000023383285,0.000026271277,0.000014688315,0.00011112647,0.00006211078,0.99490273],"category_scores_gemma":[0.0011205864,0.000085694555,0.000039014663,0.00024168301,0.000014822649,0.00014260577,0.00010055553,0.000056610188,0.001316253],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020998194,0.000038742055,0.000048889127,0.000011058779,0.0000015395187,0.0000033834287,0.000029197485,0.000022949433,0.16264181,6.983354e-8,0.83706546,0.00011588798],"study_design_scores_gemma":[0.0019285491,0.00014984142,0.3698426,0.0023995056,0.000016140888,0.000026649817,0.00006428894,0.043672424,0.048831593,0.00000836273,0.5322564,0.0008035991],"about_ca_topic_score_codex":0.000041169285,"about_ca_topic_score_gemma":0.0001582946,"teacher_disagreement_score":0.9935865,"about_ca_system_score_codex":0.00009940638,"about_ca_system_score_gemma":0.000035784087,"threshold_uncertainty_score":0.99946135},"labels":[],"label_agreement":null},{"id":"W6920746766","doi":"10.6084/m9.figshare.1415961","title":"Binding of RDX to Cell Wall Components of <i>Pinus sylvestris</i> and <i>Picea glauca</i> and Three-Year Mineralisation Study of Tissue-Associated RDX Residues","year":2015,"lang":"en","type":"article","venue":"Figshare","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Hemicellulose; Lignin; Scots pine; Cellulose; Cell wall; Subsoil; Leaching (pedology); Contamination","score_opus":0.04458402388404123,"score_gpt":0.24082091670075972,"score_spread":0.1962368928167185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6920746766","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9873312,0.00003172534,9.033224e-8,0.00003797398,0.000021301672,0.00039540004,0.011915748,0.000009540202,0.00025702748],"genre_scores_gemma":[0.9975642,0.0000029998264,0.00008618569,0.000039392984,0.0000067052933,0.0000036920474,0.002189805,0.000007754327,0.00009924525],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990673,0.000054501146,0.00027793963,0.00019010047,0.00028832318,0.00012180944],"domain_scores_gemma":[0.9994322,0.000042395754,0.00024898417,0.0001239372,0.000042354575,0.00011012557],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012017242,0.00010309782,0.00020189496,0.000043353826,0.000024938723,0.000011244722,0.00012057384,0.000063915584,0.0015348871],"category_scores_gemma":[0.00015971117,0.00009408005,0.000014547106,0.0002064294,0.00002012031,0.000100267505,0.00017013321,0.00004504147,0.000055167187],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052746153,0.00030785767,0.28103948,0.00006667308,0.000012580524,0.0000017493701,0.0024354488,0.000018532279,0.6712727,1.9512092e-7,0.044570867,0.0002211825],"study_design_scores_gemma":[0.002091921,0.00083838165,0.80127,0.0003119023,0.000027764954,8.770493e-7,0.00083037716,0.000050164224,0.1925279,0.000007580482,0.001819736,0.0002233937],"about_ca_topic_score_codex":0.0010867727,"about_ca_topic_score_gemma":0.0011462455,"teacher_disagreement_score":0.52023053,"about_ca_system_score_codex":0.000038452585,"about_ca_system_score_gemma":0.000009322272,"threshold_uncertainty_score":0.99937785},"labels":[],"label_agreement":null},{"id":"W6926200008","doi":"10.22008/fk2/g06yck/mdjjfy","title":"README.md","year":2025,"lang":"en","type":"dataset","venue":"Geological Survey of Denmark and Greenland (GEUS)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Nautical Research Society","funders":"","keywords":"Process (computing); Identification (biology); Product (mathematics)","score_opus":0.017837858165179542,"score_gpt":0.24329467057516563,"score_spread":0.22545681240998608,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926200008","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.046068043,0.00033962436,0.000008056259,0.00012403807,0.00026742,0.00023585075,0.95180786,0.000011821748,0.001137259],"genre_scores_gemma":[0.014537138,0.0042996635,0.00011240035,0.00066909357,0.000051375035,0.000004358977,0.9784125,0.00000451515,0.0019089438],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979783,0.0003969093,0.00044036668,0.00054094766,0.00031136852,0.00033210174],"domain_scores_gemma":[0.99881154,0.0003946334,0.00022809411,0.00038033217,0.000027466845,0.00015795235],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010274492,0.0003004973,0.00053909596,0.000051595594,0.00009492462,0.00002358082,0.0004295441,0.0005497428,0.009848046],"category_scores_gemma":[0.00053264434,0.00020813907,0.000078320925,0.00029694734,0.00042829636,0.000041916242,0.0006182398,0.00030342443,0.00023274963],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000859174,0.00007111976,0.17311247,0.000031536747,0.000020429232,0.000009973746,0.0000027516128,0.0000011488121,0.000069602145,4.86918e-7,0.8242512,0.002343397],"study_design_scores_gemma":[0.00024491988,0.00009344488,0.4981324,0.000021187616,0.000026052468,0.0000037422074,0.0000012069356,0.0000032483936,0.0000325377,0.0000336076,0.501205,0.00020260812],"about_ca_topic_score_codex":0.008144211,"about_ca_topic_score_gemma":0.009474102,"teacher_disagreement_score":0.32501993,"about_ca_system_score_codex":0.000026496737,"about_ca_system_score_gemma":0.000024499719,"threshold_uncertainty_score":0.99846065},"labels":[],"label_agreement":null},{"id":"W6926850757","doi":"10.25446/oxford.25923058","title":"D-Day Experiences: A French Girl's Courage and a Soldier's Duty","year":2024,"lang":"en","type":"other","venue":"Open MIND","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Courage; Duty; Shot (pellet); Doors; Porch; Living room; Sight","score_opus":0.018071861947648083,"score_gpt":0.26453740222023897,"score_spread":0.24646554027259088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926850757","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.016090788,0.00035326226,0.0000051580305,0.00013334135,0.0004728596,0.0004650387,0.00015047629,0.000007125747,0.982322],"genre_scores_gemma":[0.019837245,0.00011248513,0.0014762419,0.000115831725,0.00008650963,0.000015687148,0.000023486455,0.000092911534,0.9782396],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.998905,0.00003262241,0.00015046606,0.00053046824,0.00018015032,0.00020129078],"domain_scores_gemma":[0.9995628,0.000009153333,0.0000910347,0.00021783148,0.0000015618535,0.00011762465],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00019996102,0.00019938404,0.00020001308,0.000035783793,0.000034696932,0.00023531534,0.000398251,0.00018888175,0.37365854],"category_scores_gemma":[0.000013206619,0.0001538738,0.000031517677,0.00011686477,0.00019990953,0.00007614049,0.00053064246,0.00011832256,0.02108508],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000016307125,0.000024702418,0.00024904992,0.0000074049376,0.000014645303,0.000029010082,0.0034023193,6.286394e-8,0.001958941,5.5294464e-7,0.9708124,0.023499321],"study_design_scores_gemma":[0.00012627857,0.000022996835,0.00011990106,0.00007686038,0.000014984591,0.000005388422,0.00042016813,0.00001212594,0.0007737638,0.000008594666,0.99818,0.00023898939],"about_ca_topic_score_codex":0.0006830323,"about_ca_topic_score_gemma":0.0027031857,"teacher_disagreement_score":0.35257345,"about_ca_system_score_codex":0.000042117495,"about_ca_system_score_gemma":0.000018619035,"threshold_uncertainty_score":0.97967714},"labels":[],"label_agreement":null},{"id":"W6931325773","doi":"10.5281/zenodo.3541362","title":"NPA_ref949","year":2019,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Metabolite; Anaerobic exercise; Context (archaeology); Atlas (anatomy)","score_opus":0.015201528095443171,"score_gpt":0.20456245445795648,"score_spread":0.1893609263625133,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931325773","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46256506,0.0000073467413,0.00015051787,0.0005671143,0.00012562863,0.0003032545,0.000058079702,0.00036871427,0.5358543],"genre_scores_gemma":[0.99426347,0.000019247464,0.00015459808,0.0003330685,0.00003606152,2.9063312e-9,0.00030866562,0.00035510465,0.004529799],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99904233,0.00009362538,0.00012455127,0.00026477393,0.000250551,0.00022417186],"domain_scores_gemma":[0.9995423,0.00000601574,0.000049535334,0.00025782376,0.000035359997,0.000108983986],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00029817977,0.00007697252,0.000069181726,0.000041254305,0.0005133053,0.00020928943,0.0005284422,0.000041614447,0.25822946],"category_scores_gemma":[0.00008423161,0.00007219964,0.000029470126,0.0002888351,0.00008313997,0.00016509152,0.00072431244,0.000109087814,0.2318071],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038649105,0.000112553374,0.00032579614,0.000015370504,0.000012061497,0.000004255132,0.0005537033,0.000053494256,0.44020134,0.00065282726,0.46345603,0.0945739],"study_design_scores_gemma":[0.00024989952,0.000072877614,0.0051730783,0.0000040748305,0.0000021322471,0.00001820242,0.0000537992,0.0001138635,0.0034857164,0.00003464077,0.9906888,0.00010292623],"about_ca_topic_score_codex":0.000011870889,"about_ca_topic_score_gemma":3.0820212e-7,"teacher_disagreement_score":0.5316984,"about_ca_system_score_codex":0.00011562616,"about_ca_system_score_gemma":5.742564e-7,"threshold_uncertainty_score":0.768791},"labels":[],"label_agreement":null},{"id":"W6939394757","doi":"10.6084/m9.figshare.11530485","title":"Hydrocarbon-degrading genes in root endophytic communities on oil sands reclamation covers","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Land reclamation; Oil sands; Surface mining; Bacteria; Microorganism; Bioremediation","score_opus":0.042286225452125015,"score_gpt":0.22133615493601988,"score_spread":0.17904992948389487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6939394757","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9409315,0.00004731266,2.3184985e-7,0.0007117908,0.00006259559,0.00012147023,0.012240518,0.00007960957,0.045804963],"genre_scores_gemma":[0.99202746,0.000010420167,0.000015450929,0.0010091144,0.000033441196,0.00000931601,0.006817898,0.000007814443,0.00006906271],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994282,0.000036263365,0.00012731324,0.0001184989,0.00015281297,0.00013690832],"domain_scores_gemma":[0.99973667,0.00004667733,0.00005443304,0.0000965048,0.000003158395,0.00006258664],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00002997026,0.00009211377,0.000086626045,0.000021695198,0.000055355114,0.000030236897,0.00015817914,0.000050804167,0.11637873],"category_scores_gemma":[0.00008854838,0.00008678371,0.000028230716,0.0001858635,0.000009343839,0.000109414024,0.000074957374,0.00010869308,0.0038832594],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002520278,0.0002601072,0.12020181,0.0003618474,0.000033156008,0.00006866675,0.013988507,0.008143447,0.24095567,0.000024153805,0.53679013,0.07892048],"study_design_scores_gemma":[0.0038698066,0.0006239835,0.30626088,0.0024229896,0.000019550149,0.000010205366,0.0019821657,0.033716355,0.28329623,0.00006634741,0.36591846,0.0018130116],"about_ca_topic_score_codex":0.00007791895,"about_ca_topic_score_gemma":0.00037275706,"teacher_disagreement_score":0.18605906,"about_ca_system_score_codex":0.00009877162,"about_ca_system_score_gemma":0.0000075777166,"threshold_uncertainty_score":0.99689233},"labels":[],"label_agreement":null},{"id":"W6940294436","doi":"10.1021/es1022653.s001","title":"Petroleum Hydrocarbon Biodegradation under Seasonal Freeze−Thaw Soil Temperature Regimes in Contaminated Soils from a Sub-Arctic Site","year":2016,"lang":"en","type":"article","venue":"Figshare","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Biodegradation; Soil water; Hydrocarbon; Biostimulation; Diesel fuel; Petroleum; Mineralization (soil science); Contamination; Bioremediation","score_opus":0.01007198716663228,"score_gpt":0.19512383092935892,"score_spread":0.18505184376272665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6940294436","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9210437,0.00007069179,6.2077953e-7,0.0008428671,0.000060482664,0.00015382946,0.07715045,0.00005750483,0.00061983464],"genre_scores_gemma":[0.9690802,0.000011518198,0.000014541319,0.00052046456,0.000053518477,0.000016996228,0.029390892,0.000015718417,0.0008961383],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987141,0.00007898992,0.00020231071,0.00041259476,0.00029651177,0.00029552958],"domain_scores_gemma":[0.9994489,0.00009167253,0.00011229636,0.0002170239,0.000016355572,0.00011378528],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00005996743,0.00019020798,0.00015473795,0.00004380374,0.00005577989,0.0000523762,0.00019449228,0.00019205571,0.13701488],"category_scores_gemma":[0.00016938466,0.0001350909,0.000056420067,0.00021881389,0.00002725264,0.00028872606,0.000109683824,0.00013586922,0.008404254],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003840391,0.0000621565,0.044117715,0.0000111857125,0.000010236316,0.000015754493,0.0000948429,0.000019737645,0.8345778,0.0000016070458,0.11993357,0.0011170111],"study_design_scores_gemma":[0.0015421672,0.00005608009,0.77788407,0.0009039561,0.000009982442,0.0000044318485,0.00004660513,0.00037257705,0.20860358,0.000069078254,0.010044886,0.00046256676],"about_ca_topic_score_codex":0.0005814807,"about_ca_topic_score_gemma":0.0047087735,"teacher_disagreement_score":0.7337664,"about_ca_system_score_codex":0.00023119006,"about_ca_system_score_gemma":0.000030229616,"threshold_uncertainty_score":0.9923678},"labels":[],"label_agreement":null},{"id":"W6949892873","doi":"10.5281/zenodo.3541190","title":"NPA_ref3048","year":2019,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Natural (archaeology); Context (archaeology); Biogenesis; Term (time)","score_opus":0.015217390457645185,"score_gpt":0.20452170611206952,"score_spread":0.18930431565442432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6949892873","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46831414,0.0000073845003,0.00015264015,0.00054434617,0.00012654248,0.00030560108,0.000057240548,0.00037409374,0.53011805],"genre_scores_gemma":[0.9943317,0.000020035686,0.00015680587,0.0003306798,0.000036387075,3.0748168e-9,0.0003122493,0.00035845122,0.0044536972],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990343,0.000094426665,0.00012574118,0.00026705905,0.0002523613,0.00022611704],"domain_scores_gemma":[0.9995389,0.0000060561733,0.000050035298,0.0002594461,0.000035571473,0.00010999293],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003003561,0.000077744706,0.00006988502,0.000041178148,0.00051726424,0.0002102681,0.0005315524,0.00004203179,0.25566283],"category_scores_gemma":[0.00008460721,0.00007295471,0.00002980317,0.0002912822,0.00008388546,0.00016679092,0.00072897953,0.00011010885,0.22948238],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039913757,0.00011534787,0.000350674,0.000015796571,0.000012310548,0.0000042873335,0.00055274164,0.000054257092,0.4428443,0.00066642824,0.45850804,0.09683591],"study_design_scores_gemma":[0.00025266685,0.000074311574,0.0053059375,0.0000041274557,0.0000021438261,0.000018459614,0.00005394566,0.000114383016,0.0035245384,0.000034408895,0.9905111,0.000103984894],"about_ca_topic_score_codex":0.000011591809,"about_ca_topic_score_gemma":3.0245886e-7,"teacher_disagreement_score":0.53200305,"about_ca_system_score_codex":0.000116596704,"about_ca_system_score_gemma":5.8357807e-7,"threshold_uncertainty_score":0.77111757},"labels":[],"label_agreement":null},{"id":"W6958159911","doi":"10.6084/m9.figshare.14516105.v1","title":"Additional file 1 of Evaluating the biocontrol potential of Canadian strain Bacillus velezensis 1B-23 via its surfactin production at various pHs and temperatures","year":2021,"lang":"en","type":"article","venue":"Figshare","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Agriculture and Agri-Food Canada; Western University","funders":"","keywords":"Surfactin; Strain (injury); Bacteria; Biological pest control; Bacillus subtilis","score_opus":0.019853317235180006,"score_gpt":0.21501022498258648,"score_spread":0.1951569077474065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6958159911","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0408136,0.00003271419,1.6690832e-8,0.0002560398,0.00003804889,0.00017877405,0.95820343,0.00000550588,0.00047186427],"genre_scores_gemma":[0.51601326,0.0000020751022,0.00015481489,0.00011535041,0.00004821998,0.00002703952,0.48250863,0.0000067380806,0.0011238578],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99917716,0.00007344198,0.00016205014,0.00020786101,0.00023316879,0.0001463399],"domain_scores_gemma":[0.99946845,0.00013817265,0.0001272695,0.00011782826,0.00007393842,0.00007434569],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00006108384,0.000085033345,0.000096492935,0.00003293813,0.00013792206,0.000016541337,0.000077976525,0.000060349863,0.9757058],"category_scores_gemma":[0.0016731967,0.00006700063,0.00003852792,0.00025125558,0.000026867552,0.00006396863,0.000055275996,0.000076028235,0.0005520794],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000053782383,0.000011512748,0.000010912366,0.00001188905,0.0000080388845,0.000002735793,0.000063857806,0.00004408535,0.28195354,7.0150996e-8,0.7166732,0.0012147687],"study_design_scores_gemma":[0.0007838278,0.00019327525,0.21176617,0.0006942593,0.00004306896,0.00017847084,0.0003395598,0.0023195765,0.24498695,0.000012551318,0.53815335,0.0005289387],"about_ca_topic_score_codex":0.0008062335,"about_ca_topic_score_gemma":0.021461498,"teacher_disagreement_score":0.97515374,"about_ca_system_score_codex":0.0000735022,"about_ca_system_score_gemma":0.000108747816,"threshold_uncertainty_score":0.9963943},"labels":[],"label_agreement":null},{"id":"W6958392445","doi":"10.6084/m9.figshare.14516108.v1","title":"Additional file 2 of Evaluating the biocontrol potential of Canadian strain Bacillus velezensis 1B-23 via its surfactin production at various pHs and temperatures","year":2021,"lang":"en","type":"article","venue":"Figshare","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Agriculture and Agri-Food Canada; Western University","funders":"","keywords":"Surfactin; Strain (injury); Bacteria; Biological pest control; Bacillus subtilis","score_opus":0.01919461035905082,"score_gpt":0.21456083407648818,"score_spread":0.19536622371743737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6958392445","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.040598646,0.00003323729,1.6365334e-8,0.00025500575,0.000038291637,0.00017862594,0.95840824,0.000005509341,0.00048243985],"genre_scores_gemma":[0.51330155,0.000002133763,0.00015208244,0.00011572845,0.0000490535,0.000026634109,0.48521504,0.000006750862,0.001131001],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99917734,0.00007341841,0.0001621189,0.00020771351,0.00023311356,0.00014628883],"domain_scores_gemma":[0.99947053,0.00013632294,0.0001274376,0.000117613665,0.000073782496,0.00007433511],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000060768118,0.00008500775,0.000096515294,0.000032917716,0.00013793162,0.000016575319,0.000077935445,0.000060350194,0.9752753],"category_scores_gemma":[0.0016541041,0.00006697989,0.000038520866,0.0002510707,0.000026867201,0.00006401013,0.000055268636,0.00007601166,0.00054650503],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000053878116,0.00001158942,0.000010658294,0.0000120746145,0.000008094993,0.0000028261836,0.0000643543,0.000044594595,0.27784866,7.1816196e-8,0.72073615,0.0012555295],"study_design_scores_gemma":[0.00077850657,0.00019075727,0.2058726,0.0006771017,0.000042355394,0.0001764876,0.0003318443,0.0022745102,0.2403694,0.0000124791595,0.548753,0.0005209276],"about_ca_topic_score_codex":0.0008139164,"about_ca_topic_score_gemma":0.021579128,"teacher_disagreement_score":0.97472876,"about_ca_system_score_codex":0.000073522126,"about_ca_system_score_gemma":0.00010828967,"threshold_uncertainty_score":0.99627453},"labels":[],"label_agreement":null},{"id":"W6958466863","doi":"10.6084/m9.figshare.1415961.v1","title":"Binding of RDX to Cell Wall Components of <i>Pinus sylvestris</i> and <i>Picea glauca</i> and Three-Year Mineralisation Study of Tissue-Associated RDX Residues","year":2015,"lang":"en","type":"article","venue":"Figshare","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Hemicellulose; Lignin; Scots pine; Cellulose; Cell wall; Subsoil; Leaching (pedology); Contamination","score_opus":0.04458402388404123,"score_gpt":0.24082091670075972,"score_spread":0.1962368928167185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6958466863","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9873312,0.00003172534,9.033224e-8,0.00003797398,0.000021301672,0.00039540004,0.011915748,0.000009540202,0.00025702748],"genre_scores_gemma":[0.9975642,0.0000029998264,0.00008618569,0.000039392984,0.0000067052933,0.0000036920474,0.002189805,0.000007754327,0.00009924525],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990673,0.000054501146,0.00027793963,0.00019010047,0.00028832318,0.00012180944],"domain_scores_gemma":[0.9994322,0.000042395754,0.00024898417,0.0001239372,0.000042354575,0.00011012557],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012017242,0.00010309782,0.00020189496,0.000043353826,0.000024938723,0.000011244722,0.00012057384,0.000063915584,0.0015348871],"category_scores_gemma":[0.00015971117,0.00009408005,0.000014547106,0.0002064294,0.00002012031,0.000100267505,0.00017013321,0.00004504147,0.000055167187],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052746153,0.00030785767,0.28103948,0.00006667308,0.000012580524,0.0000017493701,0.0024354488,0.000018532279,0.6712727,1.9512092e-7,0.044570867,0.0002211825],"study_design_scores_gemma":[0.002091921,0.00083838165,0.80127,0.0003119023,0.000027764954,8.770493e-7,0.00083037716,0.000050164224,0.1925279,0.000007580482,0.001819736,0.0002233937],"about_ca_topic_score_codex":0.0010867727,"about_ca_topic_score_gemma":0.0011462455,"teacher_disagreement_score":0.52023053,"about_ca_system_score_codex":0.000038452585,"about_ca_system_score_gemma":0.000009322272,"threshold_uncertainty_score":0.99937785},"labels":[],"label_agreement":null},{"id":"W6959122741","doi":"10.7939/r3-y9wb-sh14","title":"The transport processes in soil bioremediation","year":2000,"lang":"en","type":"dissertation","venue":"Library and Archives Canada (Government of Canada)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Bioremediation; Soil contamination; Soil water; Work (physics); Process (computing)","score_opus":0.001963878763007588,"score_gpt":0.13545085301118123,"score_spread":0.13348697424817366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6959122741","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7879618,0.00019613045,2.823822e-7,0.0009700494,0.00021372281,0.00020305191,0.0001396373,0.0000051623183,0.21031015],"genre_scores_gemma":[0.9746341,0.0017370579,0.000027627359,0.00032872477,0.000026012438,0.0000062112686,0.00012242227,0.000014211849,0.023103625],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99803853,0.000028572185,0.00031352832,0.00022143684,0.001175833,0.000222118],"domain_scores_gemma":[0.9995173,0.00009657961,0.00016868926,0.000111779766,1.8451965e-7,0.00010547059],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000012165762,0.00017082029,0.00015925853,0.000011864143,0.00013520494,0.000013949806,0.00022048228,0.000050033184,0.0002883603],"category_scores_gemma":[0.000003288302,0.00013120253,0.000017130398,0.00013309678,0.00005988779,0.00017760355,0.000017238332,0.00013229984,2.0557586e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006316306,0.00024481988,0.51932096,0.0014688694,0.00014317597,0.00017797569,0.0029407444,0.00069820427,0.28746098,0.0017999368,0.009887477,0.16954054],"study_design_scores_gemma":[0.00034811904,0.000036722704,0.6890889,0.00014198717,0.000019487636,0.0000011836637,0.0023077216,0.00015195989,0.23016357,0.00025683732,0.07709164,0.00039186983],"about_ca_topic_score_codex":0.0053124675,"about_ca_topic_score_gemma":0.759647,"teacher_disagreement_score":0.75433457,"about_ca_system_score_codex":0.000012139908,"about_ca_system_score_gemma":0.0010254239,"threshold_uncertainty_score":0.80308974},"labels":[],"label_agreement":null},{"id":"W6966654598","doi":"10.48336/4369-2k43","title":"Comparative genomic analysis, transcriptome and hydrocarbon-degrading capability of Vibrio sp. strain J502","year":2025,"lang":"en","type":"article","venue":"Memorial University Research Repository (Memorial University)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Marine bacteriophage; Vibrio; Bacteria; Strain (injury); Bacillus (shape); Petroleum; Contamination; Crude oil; Pseudomonas","score_opus":0.022575918995605963,"score_gpt":0.25136263665192765,"score_spread":0.2287867176563217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6966654598","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9517293,0.000018408844,0.00015984682,0.00009601053,0.0009234942,0.0004700284,0.000089999055,0.00004268446,0.046470247],"genre_scores_gemma":[0.9920792,0.000054695887,0.00017428194,0.0000070679425,0.00016370861,8.8539224e-8,0.000020475805,0.0000056700505,0.0074948194],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9971254,0.00077957765,0.00027924133,0.00073925976,0.0006010547,0.00047546218],"domain_scores_gemma":[0.99883795,0.00021537795,0.00014275897,0.0004140746,0.000114586066,0.0002752496],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007097877,0.00022659052,0.0005548854,0.0008541797,0.0006827719,0.00006032095,0.0007475835,0.00022268819,0.00024168282],"category_scores_gemma":[0.000042760475,0.00026123069,0.00023752249,0.0032370407,0.0013215767,0.00041243064,0.0004994865,0.00043524217,0.000018613448],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014486823,0.00019675281,0.04392681,0.000035786717,0.00045539017,0.00011033106,0.0013499378,0.00020898487,0.95007706,0.0012016698,0.0008370915,0.00015148609],"study_design_scores_gemma":[0.015010514,0.00124792,0.57396114,0.00014409443,0.0028314043,0.0000154441,0.02041826,0.003991291,0.26263994,0.0007800555,0.116945654,0.002014279],"about_ca_topic_score_codex":0.0034970036,"about_ca_topic_score_gemma":0.0015299681,"teacher_disagreement_score":0.6874372,"about_ca_system_score_codex":0.0011345313,"about_ca_system_score_gemma":0.00024474246,"threshold_uncertainty_score":0.99998397},"labels":[],"label_agreement":null},{"id":"W6973934564","doi":"10.58011/rabq-7720","title":"Remediación de suelo contaminado con gasolina utilizando el método Extracción de Vapores del Suelo combinado con Oxidación Catalítica","year":2024,"lang":"es","type":"dissertation","venue":"Universidad de Chile","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Hydrology (agriculture); Land use; Oxisol; Vegetation (pathology)","score_opus":0.007925273561130718,"score_gpt":0.2563923367951372,"score_spread":0.24846706323400647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6973934564","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97077364,0.0012231399,0.000095115625,0.0005461791,0.0014844293,0.0010742529,0.0010042213,0.00024302611,0.023555975],"genre_scores_gemma":[0.98321766,0.003115284,0.0002966388,0.0005200468,0.0002085073,0.00001157097,0.0028868502,0.00014290065,0.009600546],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9949273,0.00036023255,0.00085325015,0.0013946309,0.0008167034,0.0016479158],"domain_scores_gemma":[0.997229,0.0003358459,0.0005909155,0.00074698275,0.00012461371,0.000972636],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0007840333,0.0010400908,0.000915277,0.00045339915,0.000575587,0.0003292713,0.0011491093,0.0012725359,0.006329771],"category_scores_gemma":[0.00026131116,0.001126975,0.0004883675,0.00074698025,0.0005572551,0.0004341832,0.0002883405,0.0011902499,0.0031055673],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016896976,0.0013219017,0.13469031,0.0013569547,0.00060549733,0.0026806316,0.02002943,0.00014762739,0.76383436,0.00794739,0.059526153,0.0061700433],"study_design_scores_gemma":[0.006001412,0.00083162665,0.5974878,0.0018178571,0.0015771977,0.0004511213,0.01742171,0.0034923658,0.30728945,0.001503234,0.05866499,0.0034612252],"about_ca_topic_score_codex":0.0055221366,"about_ca_topic_score_gemma":0.0036057155,"teacher_disagreement_score":0.4627975,"about_ca_system_score_codex":0.0022914887,"about_ca_system_score_gemma":0.00089207315,"threshold_uncertainty_score":0.99911803},"labels":[],"label_agreement":null},{"id":"W6976965015","doi":"10.6084/m9.figshare.11530485.v1","title":"Hydrocarbon-degrading genes in root endophytic communities on oil sands reclamation covers","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Land reclamation; Oil sands; Surface mining; Bacteria; Microorganism; Bioremediation","score_opus":0.042286225452125015,"score_gpt":0.22133615493601988,"score_spread":0.17904992948389487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6976965015","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9409315,0.00004731266,2.3184985e-7,0.0007117908,0.00006259559,0.00012147023,0.012240518,0.00007960957,0.045804963],"genre_scores_gemma":[0.99202746,0.000010420167,0.000015450929,0.0010091144,0.000033441196,0.00000931601,0.006817898,0.000007814443,0.00006906271],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994282,0.000036263365,0.00012731324,0.0001184989,0.00015281297,0.00013690832],"domain_scores_gemma":[0.99973667,0.00004667733,0.00005443304,0.0000965048,0.000003158395,0.00006258664],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00002997026,0.00009211377,0.000086626045,0.000021695198,0.000055355114,0.000030236897,0.00015817914,0.000050804167,0.11637873],"category_scores_gemma":[0.00008854838,0.00008678371,0.000028230716,0.0001858635,0.000009343839,0.000109414024,0.000074957374,0.00010869308,0.0038832594],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002520278,0.0002601072,0.12020181,0.0003618474,0.000033156008,0.00006866675,0.013988507,0.008143447,0.24095567,0.000024153805,0.53679013,0.07892048],"study_design_scores_gemma":[0.0038698066,0.0006239835,0.30626088,0.0024229896,0.000019550149,0.000010205366,0.0019821657,0.033716355,0.28329623,0.00006634741,0.36591846,0.0018130116],"about_ca_topic_score_codex":0.00007791895,"about_ca_topic_score_gemma":0.00037275706,"teacher_disagreement_score":0.18605906,"about_ca_system_score_codex":0.00009877162,"about_ca_system_score_gemma":0.0000075777166,"threshold_uncertainty_score":0.99689233},"labels":[],"label_agreement":null},{"id":"W6980242065","doi":"","title":"Bioremediation of a TCA-contaminated site : From microcosms to column to field studies","year":2004,"lang":"en","type":"article","venue":"NPARC","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Bioremediation; Microcosm; Column (typography); Field (mathematics); Contamination","score_opus":0.011755428890145088,"score_gpt":0.24705078431105315,"score_spread":0.23529535542090807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6980242065","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954395,0.000009148775,0.00020414656,0.0028206706,0.00015566478,0.00031225593,0.000060217153,0.000023467923,0.0009748993],"genre_scores_gemma":[0.99202573,0.00001542689,0.005360412,0.002380021,0.000031048367,0.0000068142194,0.0000135641285,0.0000057689826,0.00016120488],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99919975,0.000017243168,0.00020700842,0.0002228162,0.00019042491,0.00016277071],"domain_scores_gemma":[0.9996236,0.000040154482,0.000060739807,0.00014475112,0.000022928652,0.00010781006],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000100361394,0.00009290894,0.00014425856,0.000037683654,0.00003974408,0.000010158539,0.0001346595,0.000054179334,0.0014207305],"category_scores_gemma":[0.00012993543,0.00008422382,0.00003154433,0.0002912593,0.000035931833,0.000059513663,0.000121647165,0.000044342625,0.001257915],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034014687,0.000042396045,0.009877238,0.0000026709597,0.00000936384,0.0000016872527,0.0022383789,0.00004089713,0.9741236,0.0000054941875,0.009411643,0.0042126337],"study_design_scores_gemma":[0.00041342876,0.00018273066,0.07068587,0.000025955896,0.000009456478,2.9388093e-7,0.00019125658,0.0000050509775,0.92328626,0.00028752995,0.0047834287,0.00012871792],"about_ca_topic_score_codex":0.0005622889,"about_ca_topic_score_gemma":0.0021086514,"teacher_disagreement_score":0.060808633,"about_ca_system_score_codex":0.00014047108,"about_ca_system_score_gemma":0.000010132769,"threshold_uncertainty_score":0.9995197},"labels":[],"label_agreement":null},{"id":"W6980726335","doi":"","title":"Conférences Genre et Parenté","year":2012,"lang":"fr","type":"other","venue":"OpenEdition (OpenEdition)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Context (archaeology); Order (exchange); Representation (politics); Taste","score_opus":0.017231817704170562,"score_gpt":0.23812697463607901,"score_spread":0.22089515693190845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6980726335","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0038259334,0.0020182268,0.0004350179,0.04267451,0.010170437,0.0018639901,0.0039280695,0.00019869547,0.93488514],"genre_scores_gemma":[0.17099714,0.006594257,0.0022354207,0.06718393,0.0027964842,0.00020311275,0.0072304,0.0002953971,0.7424638],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9951922,0.000557334,0.0009493152,0.0011300142,0.0011163981,0.0010547016],"domain_scores_gemma":[0.9974194,0.00015847663,0.0009041471,0.0006881876,0.00008769064,0.000742089],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0008138211,0.00089919363,0.0007262702,0.00018660982,0.00045320453,0.00040709358,0.00094173604,0.0008843772,0.76641184],"category_scores_gemma":[0.00010074162,0.00085741375,0.00029944588,0.00048687527,0.0008100637,0.0074146716,0.00044972793,0.00061389495,0.19397986],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010378011,0.0013701078,0.0071734157,0.00022096501,0.00024135182,0.000059730715,0.00041614615,0.00006346863,0.016740125,0.0859206,0.84254956,0.04514072],"study_design_scores_gemma":[0.0008243433,0.00014287408,0.10324798,0.0003139705,0.00013984888,0.0000405852,0.00014806441,0.000025236746,0.0046017156,0.00021992724,0.88924676,0.0010486923],"about_ca_topic_score_codex":0.00067100785,"about_ca_topic_score_gemma":0.009955033,"teacher_disagreement_score":0.572432,"about_ca_system_score_codex":0.0004555944,"about_ca_system_score_gemma":0.00015528621,"threshold_uncertainty_score":0.9993877},"labels":[],"label_agreement":null},{"id":"W6982550686","doi":"","title":"Interactions entre le sommeil, lâattention et le contrôle postural chez des sujets jeunes et âgés","year":2012,"lang":"fr","type":"other","venue":"Library and Archives Canada (Government of Canada)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Poison control; Privation; Behavioral analysis; Motor activity","score_opus":0.00421299752793928,"score_gpt":0.15356815497132525,"score_spread":0.14935515744338598,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6982550686","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14581366,0.00097593194,0.00006170435,0.032996066,0.0010267175,0.00045307112,0.001482126,0.000021061724,0.81716967],"genre_scores_gemma":[0.79539585,0.00051492744,0.0005011957,0.0021731479,0.00007720055,0.000003895682,0.00008724803,0.00004886592,0.20119765],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976388,0.00022546387,0.00038011587,0.00036410004,0.0009214834,0.00047004278],"domain_scores_gemma":[0.99891526,0.00014632542,0.00035578173,0.00019372023,7.1346125e-7,0.00038817592],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000028821814,0.00035780043,0.0003353073,0.000028098846,0.00029444456,0.00006131666,0.00026797745,0.00007959216,0.00538058],"category_scores_gemma":[0.0000059668537,0.00034839532,0.00007270224,0.00007953607,0.00035395884,0.00082423945,0.0002512657,0.0002566595,4.9348944e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002992683,0.000583548,0.09798622,0.00028037248,0.00026161765,0.000042701824,0.00076743815,0.000039653103,0.78851515,0.061416272,0.02620818,0.023599587],"study_design_scores_gemma":[0.0011698075,0.000053665422,0.3083335,0.00028599275,0.000045223453,0.000020822132,0.006126901,0.00018332346,0.10497079,0.00023701089,0.57800806,0.0005649313],"about_ca_topic_score_codex":0.057575207,"about_ca_topic_score_gemma":0.4765484,"teacher_disagreement_score":0.68354434,"about_ca_system_score_codex":0.000034964076,"about_ca_system_score_gemma":0.0012322797,"threshold_uncertainty_score":0.9998968},"labels":[],"label_agreement":null},{"id":"W6986367599","doi":"","title":"Phytoremediation of Soil containing&#13;\\nMixed Contaminants","year":2012,"lang":"en","type":"dissertation","venue":"Spectrum Research Repository (Concordia University)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Concordia University","keywords":"Phytoremediation; EDDS; Soil contamination; Contamination; Leaching (pedology); Chelation; Pulmonary surfactant; Soil water","score_opus":0.020345957341563355,"score_gpt":0.25626956033091214,"score_spread":0.23592360298934878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6986367599","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8495198,0.00006393169,0.0000035953688,0.00004487133,0.0012494223,0.00047408647,0.00003181605,0.000045762226,0.14856675],"genre_scores_gemma":[0.95296705,0.00014131732,0.0000077680725,0.0000066265948,0.00025490634,0.0000018554039,0.00025432245,0.000037497906,0.046328638],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9964684,0.0004954165,0.00043722117,0.0006179681,0.001169098,0.000811876],"domain_scores_gemma":[0.9983007,0.0001722522,0.0005230463,0.0004994233,0.00013553635,0.00036908974],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007898959,0.00032464176,0.00048049365,0.0004975506,0.00038431803,0.00004558441,0.0007305725,0.0005079847,0.0014569657],"category_scores_gemma":[0.00012085769,0.00034810256,0.0002052004,0.001001068,0.00041954085,0.00040197762,0.00019868367,0.00074792455,0.00044647508],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010291245,0.00025921976,0.49818042,0.0001248269,0.00010936663,0.00011088313,0.0013497247,0.0000072816924,0.49262223,0.00013335606,0.004213458,0.0018601103],"study_design_scores_gemma":[0.0007118497,0.00028563032,0.71644586,0.000071152885,0.000057168152,0.000004096601,0.0014637815,0.000022690738,0.26602644,0.000030450234,0.014533062,0.00034781054],"about_ca_topic_score_codex":0.024958858,"about_ca_topic_score_gemma":0.08910193,"teacher_disagreement_score":0.22659579,"about_ca_system_score_codex":0.0009903382,"about_ca_system_score_gemma":0.00033360496,"threshold_uncertainty_score":0.9998971},"labels":[],"label_agreement":null},{"id":"W6989597130","doi":"","title":"Biosurfactant enhanced remediation of a mixed contaminated soil","year":2006,"lang":"en","type":"dissertation","venue":"Spectrum Research Repository (Concordia University)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Environmental remediation; Contamination; Soil contamination; Zinc; Copper; Diesel fuel; Heavy metals; Saponin","score_opus":0.012670780910000474,"score_gpt":0.23980044765477984,"score_spread":0.22712966674477936,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6989597130","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8647667,0.0000280451,0.000010935749,0.000059517868,0.0008250791,0.0005380837,0.000046020185,0.00006492721,0.13366064],"genre_scores_gemma":[0.92861336,0.000116204355,0.000019242209,0.000003421877,0.000095511554,0.0000015461285,0.0005217624,0.000036011577,0.07059293],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962748,0.00053884636,0.00052004773,0.0007804421,0.0011971687,0.00068865396],"domain_scores_gemma":[0.9983639,0.00015744232,0.0005522806,0.00051635026,0.00017344387,0.0002365578],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00059216947,0.00034239682,0.00048331905,0.0006064177,0.00035706107,0.000057216537,0.00072152336,0.0005507745,0.0006872832],"category_scores_gemma":[0.00010679122,0.00036886247,0.00021796586,0.0015841699,0.00042331353,0.00026540863,0.00016286997,0.00071032677,0.00024210759],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045703226,0.00016462168,0.019604696,0.000076386605,0.00005379722,0.00010627343,0.00022968464,0.000020306956,0.9743274,0.00005397209,0.0041990085,0.00070683507],"study_design_scores_gemma":[0.0006200693,0.00021730347,0.23181833,0.00006865686,0.00004029418,0.0000021023616,0.00053196016,0.00003684985,0.76059604,0.00004118659,0.0057110977,0.00031611838],"about_ca_topic_score_codex":0.028358977,"about_ca_topic_score_gemma":0.101555936,"teacher_disagreement_score":0.21373135,"about_ca_system_score_codex":0.001165868,"about_ca_system_score_gemma":0.00037775075,"threshold_uncertainty_score":0.9998763},"labels":[],"label_agreement":null},{"id":"W6989935453","doi":"","title":"Characterization of pyrene degradation by Mycobacterium sp. strain S65","year":2002,"lang":"en","type":"dissertation","venue":"eScholarship@McGill (McGill)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pyrene; Fluoranthene; Phenanthrene; Bacteria; Bioaugmentation; Strain (injury); Degradation (telecommunications); Mineralization (soil science)","score_opus":0.010190484107407713,"score_gpt":0.20287010116670032,"score_spread":0.1926796170592926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6989935453","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9693244,0.000023650833,3.9206432e-7,0.00002011451,0.0009543773,0.0006219798,0.0078731915,0.000111915186,0.021069987],"genre_scores_gemma":[0.9634076,0.0004679159,0.00019459722,0.00019135437,0.00003472625,0.000023603467,0.01899085,0.000112284,0.01657708],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99641937,0.00021864226,0.001040348,0.00090796256,0.00088374276,0.0005299571],"domain_scores_gemma":[0.997976,0.00004131686,0.0011217662,0.0005065308,0.00009435855,0.00026002337],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00044912877,0.00062172255,0.0005694594,0.00016223981,0.00036585607,0.000062139814,0.0005426913,0.0007724769,0.0092822965],"category_scores_gemma":[0.00016222784,0.0006527772,0.00021903221,0.0006067548,0.00009055411,0.00083287485,0.00009774732,0.0005782354,0.0011665617],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000063299005,0.0001996157,0.00020681585,0.00008401372,0.000035180125,0.0000033454555,0.000009478124,0.0000016198273,0.9331867,0.00018194293,0.000048801696,0.065979205],"study_design_scores_gemma":[0.00058055384,0.00011599276,0.023784503,0.00012818263,0.00009401061,0.0000045802904,0.000045800465,0.000020594198,0.9209365,0.00018599503,0.053308364,0.00079489156],"about_ca_topic_score_codex":0.00022770242,"about_ca_topic_score_gemma":0.00068752695,"teacher_disagreement_score":0.06518431,"about_ca_system_score_codex":0.0005652291,"about_ca_system_score_gemma":0.000014441062,"threshold_uncertainty_score":0.99961114},"labels":[],"label_agreement":null},{"id":"W6997137308","doi":"","title":"Three tellings, four models and differing perceptions, the construction of female sexuality in the R¢am¢ayana","year":2000,"lang":"en","type":"other","venue":"Library and Archives Canada (Government of Canada)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Human sexuality; Qualitative research; Identity (music); Field (mathematics)","score_opus":0.006650485258435036,"score_gpt":0.1490786866543843,"score_spread":0.14242820139594928,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6997137308","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3522406,0.00027917873,0.000081027785,0.0021717476,0.00012355548,0.0004592465,0.00057373755,0.000008724127,0.6440622],"genre_scores_gemma":[0.9840696,0.0012482277,0.00057695137,0.00059344375,0.000040911862,0.000003242398,0.000009212215,0.000031785337,0.013426667],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99868184,0.000060524137,0.0002025385,0.00018590111,0.0007252075,0.00014398523],"domain_scores_gemma":[0.9995567,0.000072451236,0.00014532413,0.00016819774,7.494065e-8,0.000057246143],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000020151752,0.00014171105,0.00016701242,0.000012655311,0.00007908875,0.000013025391,0.00019909257,0.000040344436,0.00055853603],"category_scores_gemma":[8.91162e-7,0.00009190277,0.000016250035,0.000060169783,0.00024459907,0.00008706026,0.00007997006,0.00012094788,8.863844e-9],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00062178087,0.0002270566,0.71383697,0.0008621448,0.00024448414,0.0000688251,0.0034375684,0.000817944,0.07584613,0.013573486,0.07796106,0.11250258],"study_design_scores_gemma":[0.0010626257,0.00012141379,0.78420377,0.00045600167,0.00009313998,0.000041860647,0.0104792435,0.006085806,0.008419529,0.0033139784,0.18468764,0.0010349709],"about_ca_topic_score_codex":0.014272685,"about_ca_topic_score_gemma":0.2168395,"teacher_disagreement_score":0.63182896,"about_ca_system_score_codex":0.000005694258,"about_ca_system_score_gemma":0.00009574816,"threshold_uncertainty_score":0.99229133},"labels":[],"label_agreement":null},{"id":"W6998497456","doi":"","title":"Anaerobic biodegradation of trichlorethylene sorbed by a surrogate soil organic matter","year":2000,"lang":"en","type":"article","venue":"NPARC","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Biodegradation; Anaerobic exercise; Organic matter; Soil organic matter; Cometabolism; Soil water","score_opus":0.005145759258019103,"score_gpt":0.18788880897161925,"score_spread":0.18274304971360014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6998497456","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9880572,0.000008997569,0.00001840418,0.00067920395,0.000039894123,0.00009855308,0.000036165315,0.00002166581,0.011039896],"genre_scores_gemma":[0.9951888,0.00007780662,0.0003965102,0.0004656337,0.000010159717,0.000001309052,0.0000471735,0.000008831114,0.0038037982],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992244,0.00003868063,0.00020087698,0.00018668867,0.00018245667,0.00016688046],"domain_scores_gemma":[0.99969506,0.000016245647,0.00007024264,0.00015313593,0.0000058685478,0.000059424736],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00012419744,0.00009206275,0.000107595595,0.000019476836,0.000037402944,0.000011389446,0.0001384583,0.000061327286,0.17895967],"category_scores_gemma":[0.000009708191,0.0000785429,0.00003461096,0.00026740332,0.000088293644,0.00010158418,0.000025309517,0.00005245492,0.0049872138],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017716877,0.000050575774,0.0064424626,0.0000026079022,0.0000034302986,3.625188e-7,0.00008303863,0.000003226779,0.944023,0.000001270199,0.040449668,0.008922636],"study_design_scores_gemma":[0.00053028204,0.000045350735,0.022013376,0.0000052063506,0.000009794759,0.0000017615399,0.00001345198,0.00013191852,0.96564746,0.00011620754,0.011332868,0.00015233405],"about_ca_topic_score_codex":0.00008301263,"about_ca_topic_score_gemma":0.00006300924,"teacher_disagreement_score":0.17397244,"about_ca_system_score_codex":0.000047705584,"about_ca_system_score_gemma":0.0000070612764,"threshold_uncertainty_score":0.9957875},"labels":[],"label_agreement":null},{"id":"W6998945254","doi":"","title":"Assessing toluene biodegradation potential in groundwater using molecular biological tools","year":2022,"lang":"en","type":"dissertation","venue":"The Atrium (University of Guelph)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Groundwater; Toluene; Biodegradation; Microbial population biology; Degradation (telecommunications); Microbial biodegradation; Contamination","score_opus":0.028295053269782818,"score_gpt":0.2439847323489722,"score_spread":0.21568967907918937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6998945254","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983167,0.000042139032,0.00018806398,0.00014458335,0.00023406716,0.00019873031,0.000018734565,0.00001433428,0.00084264023],"genre_scores_gemma":[0.9982687,0.000047603306,0.0005713181,0.000039639897,0.000012822636,1.0464088e-7,0.00055422593,0.000007687005,0.00049788767],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989531,0.00017273682,0.0001535039,0.0002661654,0.00027881793,0.00017564613],"domain_scores_gemma":[0.99952096,0.000020303933,0.00024127921,0.0001729911,0.00001256185,0.00003190023],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002853856,0.00013439027,0.00018435101,0.00007950345,0.0002100251,0.000038225036,0.00040647876,0.00015905207,0.0049675354],"category_scores_gemma":[0.0000143368825,0.00012176346,0.00011120209,0.0003309523,0.00010199464,0.00030760936,0.00017686875,0.00021515302,0.000047778693],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000072178394,0.000049721653,0.0016817064,0.000008631378,0.0000111293575,0.000024831152,0.0004510019,0.00036521512,0.9951287,0.000009530108,0.0000879087,0.0021094482],"study_design_scores_gemma":[0.00076065364,0.00009941506,0.970894,0.000035655263,0.0001267883,0.000008642373,0.012385215,0.0015124179,0.011618257,0.00014847683,0.0019118169,0.00049870904],"about_ca_topic_score_codex":0.0029499298,"about_ca_topic_score_gemma":0.0006715391,"teacher_disagreement_score":0.98351043,"about_ca_system_score_codex":0.00023923322,"about_ca_system_score_gemma":0.000028810131,"threshold_uncertainty_score":0.99594206},"labels":[],"label_agreement":null},{"id":"W7000314174","doi":"","title":"Evaluating the potential of alder-Frankia symbionts for the remediation and revegetation of oil sands tailings","year":2006,"lang":"en","type":"dissertation","venue":"eScholarship@McGill (McGill)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Natural Resources Canada","keywords":"Tailings; Oil sands; Revegetation; Environmental remediation; Land reclamation; Population","score_opus":0.01619860246064277,"score_gpt":0.2611893778555516,"score_spread":0.2449907753949088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7000314174","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954284,0.00022069919,0.0000016961284,0.000060716295,0.0006568684,0.0006941121,0.00041807885,0.000023070845,0.0024963804],"genre_scores_gemma":[0.99567294,0.00028390737,0.0007606137,0.00009513446,0.000043523873,0.000045033117,0.00068928447,0.000044758544,0.0023648294],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971796,0.00022664935,0.0009205913,0.00051535567,0.0008619764,0.00029579407],"domain_scores_gemma":[0.9977407,0.00037637033,0.001249757,0.00037386324,0.00019506537,0.00006425908],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019481358,0.00033150392,0.00036780944,0.00007814896,0.00068178854,0.000035050514,0.000420516,0.00037480055,0.00017705148],"category_scores_gemma":[0.0007810945,0.0002292408,0.00020656083,0.0003361704,0.00016395339,0.00028671758,0.000080036836,0.00034823013,0.000018061071],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019418688,0.000056364614,0.00014626488,0.00017606605,0.000046849396,3.2100147e-7,0.00003017062,0.00019790056,0.85513157,0.00029434107,0.000023307968,0.14370264],"study_design_scores_gemma":[0.0028880478,0.0005673377,0.06417833,0.00047985645,0.001007293,0.000008820419,0.0006569891,0.0030503988,0.9161444,0.0050885556,0.0049967,0.0009333198],"about_ca_topic_score_codex":0.00064746843,"about_ca_topic_score_gemma":0.0016896891,"teacher_disagreement_score":0.14276932,"about_ca_system_score_codex":0.000164677,"about_ca_system_score_gemma":0.00002470366,"threshold_uncertainty_score":0.9348169},"labels":[],"label_agreement":null},{"id":"W7008369019","doi":"","title":"Bioaugmentation coupled with activated carbon for the treatment of petroleum hydrocarbons in groundwater systems","year":2024,"lang":"en","type":"dissertation","venue":"UWSpace (University of Waterloo)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"University of Waterloo; University of Toronto","keywords":"Bioaugmentation; Biodegradation; Microcosm; Activated carbon; Groundwater; Amendment; Anaerobic exercise; Permeable reactive barrier; Powdered activated carbon treatment; Plume","score_opus":0.007858501031022074,"score_gpt":0.19092675373319423,"score_spread":0.18306825270217217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7008369019","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985262,0.00008599926,0.000002727453,0.00019542544,0.00023618719,0.0007360512,0.000028180122,0.000015811305,0.00017338776],"genre_scores_gemma":[0.9301434,0.00020863368,0.00004277557,0.0000021678231,0.000010816072,0.0000028050151,0.00034201075,0.000015400703,0.069231994],"study_design_codex":"bench_or_experimental","study_design_gemma":"qualitative","domain_scores_codex":[0.9992075,0.00002854186,0.00013165097,0.0002624255,0.0002082128,0.00016168617],"domain_scores_gemma":[0.9995697,0.00003548062,0.00019559459,0.00015626337,0.000010686119,0.000032281037],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000745171,0.00017796361,0.00026214588,0.000107561376,0.000053595122,0.000014442227,0.0001471444,0.0001359151,0.00005917198],"category_scores_gemma":[0.000001234531,0.0001232679,0.00007505555,0.00018871923,0.00009161912,0.00006719587,0.000012362322,0.000059518665,0.000012668287],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017628665,0.0005335414,0.0069512185,0.00031111194,0.0003822773,0.000018312423,0.123778276,0.0011027153,0.86392176,0.000011769522,0.00021584729,0.0010102951],"study_design_scores_gemma":[0.010856247,0.005914879,0.08886831,0.0011510121,0.002283605,0.0000073203596,0.55455184,0.0611487,0.2704032,0.00004538395,0.003136371,0.0016331348],"about_ca_topic_score_codex":0.1273101,"about_ca_topic_score_gemma":0.21548972,"teacher_disagreement_score":0.59351856,"about_ca_system_score_codex":0.0003221034,"about_ca_system_score_gemma":0.000024798359,"threshold_uncertainty_score":0.87850124},"labels":[],"label_agreement":null},{"id":"W7009675349","doi":"","title":"Establishment of a bioremediation facility in South Australia - research and commercial potential","year":2007,"lang":"en","type":"article","venue":"Adelaide Research & Scholarship (AR&S) (University of Adelaide)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Bioremediation; Environmental remediation; Contaminated land; Soil contamination; Pollutant; Soil remediation","score_opus":0.11940737732039482,"score_gpt":0.3501027569451786,"score_spread":0.23069537962478381,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7009675349","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99781966,0.00004912943,0.00013456214,0.00071834575,0.00006137429,0.00060321245,0.0001270457,0.00001586865,0.00047078004],"genre_scores_gemma":[0.998495,0.00013116654,0.00084645883,0.000015025176,0.000023886549,4.3275017e-7,0.000041809282,0.000008609026,0.00043765715],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99514246,0.0007927072,0.00046129333,0.00062956475,0.0020410873,0.00093287474],"domain_scores_gemma":[0.99834037,0.0003545384,0.00017549399,0.0004229594,0.00028639153,0.00042024572],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.01174366,0.00017729662,0.00031706388,0.00074920576,0.00037934148,0.000050221654,0.00072602293,0.00032746463,0.0017764865],"category_scores_gemma":[0.0006055166,0.00020196104,0.000085989544,0.0018983763,0.0018411917,0.0010223162,0.00083473354,0.0013698058,0.00026333527],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001009793,0.0004696941,0.6806875,0.00007905484,0.000025247085,0.0000942893,0.0050915605,0.000040747145,0.30501127,0.00016293647,0.0010320237,0.0062958836],"study_design_scores_gemma":[0.001383896,0.00036751857,0.97473013,0.00006957186,0.000009749924,0.0000036827935,0.0047196196,0.000039394832,0.017088208,0.0006561853,0.00073147356,0.00020059272],"about_ca_topic_score_codex":0.004709469,"about_ca_topic_score_gemma":0.0073622707,"teacher_disagreement_score":0.29404262,"about_ca_system_score_codex":0.0005056235,"about_ca_system_score_gemma":0.0000989934,"threshold_uncertainty_score":0.99913603},"labels":[],"label_agreement":null},{"id":"W7015839848","doi":"","title":"Towards a Better Understanding of Activated Carbon-Based Amendments for In Situ Treatment of Petroleum Hydrocarbons in Anaerobic Groundwater Systems","year":2023,"lang":"en","type":"dissertation","venue":"UWSpace (University of Waterloo)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Ontario Genomics; University of Waterloo; University of Toronto; Ontario Genomics Institute; McGill University","keywords":"Sorption; Microcosm; Biodegradation; Desorption; Activated carbon; Groundwater; Toluene; Freundlich equation","score_opus":0.02154419457689285,"score_gpt":0.2145076160276414,"score_spread":0.19296342145074855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7015839848","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989279,0.000008811049,0.0000055383416,0.000108783526,0.00016704947,0.00056401495,0.000053298954,0.0000133559,0.00015123356],"genre_scores_gemma":[0.99164104,0.00003090549,0.000118302334,0.0000030791462,0.0000046530818,0.0000018278458,0.0004236274,0.000019115823,0.007757452],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998863,0.000062357314,0.0002516347,0.00031577432,0.00025039367,0.00025685373],"domain_scores_gemma":[0.9994015,0.000034587505,0.00034038443,0.00016527374,0.000008962337,0.000049283146],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012245738,0.00021060919,0.0004962268,0.0003793581,0.000030849336,0.000006322642,0.00017828964,0.00022171122,0.00003688311],"category_scores_gemma":[0.0000039828556,0.00021475425,0.00012568572,0.00032853737,0.00008408073,0.00007398939,0.000024256378,0.000067823676,0.0000042907795],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00053544453,0.00035177072,0.021247996,0.0002314195,0.000076043834,0.000015272033,0.025795927,0.0004200053,0.951148,0.0000034375462,0.000039237126,0.00013548972],"study_design_scores_gemma":[0.010204287,0.0018229666,0.111732475,0.0011715245,0.0003056922,6.2166777e-7,0.17650676,0.004049492,0.69311196,0.000091702605,0.000060908667,0.0009416122],"about_ca_topic_score_codex":0.13055095,"about_ca_topic_score_gemma":0.2530078,"teacher_disagreement_score":0.258036,"about_ca_system_score_codex":0.0011149625,"about_ca_system_score_gemma":0.000046789653,"threshold_uncertainty_score":0.87574244},"labels":[],"label_agreement":null},{"id":"W7017620066","doi":"","title":"Biodegradation of anthracene and pyrene in a laboratory-scale biobarrier","year":2001,"lang":"en","type":"article","venue":"NPARC","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Biodegradation; Pyrene; Anthracene; Degradation (telecommunications); Hydrocarbon","score_opus":0.006039676674966003,"score_gpt":0.20851488002615234,"score_spread":0.20247520335118635,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7017620066","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99555445,0.000016114207,0.0000159295,0.00038151196,0.000029185694,0.00005994383,0.000018663071,0.000007064772,0.003917144],"genre_scores_gemma":[0.9987018,0.0001567854,0.0009502449,0.00008607705,0.000006177418,7.267758e-7,0.00000437049,0.0000025715392,0.000091221744],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99957997,0.000018575334,0.000111228765,0.00011253392,0.000089882175,0.000087836605],"domain_scores_gemma":[0.99984044,0.0000064482674,0.00003785625,0.00007089981,0.0000046915925,0.00003968273],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010958129,0.00004603258,0.00006439652,0.00002438537,0.000016144151,0.0000053163644,0.000044163487,0.000037242447,0.0028328055],"category_scores_gemma":[0.000013094894,0.00003971376,0.000007605724,0.0002508718,0.000094574614,0.000080449776,0.000030220726,0.0000286641,0.00004961124],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008097637,0.000023407401,0.31040475,0.000001217312,4.3380965e-7,7.7638344e-7,0.00007490747,9.959276e-7,0.68346804,0.0000057520206,0.00040166616,0.0056099426],"study_design_scores_gemma":[0.00045004798,0.00003623564,0.5812556,0.000010635242,0.000002549725,0.0000016708889,0.000064798915,0.0002477507,0.40894827,0.00016343508,0.008720207,0.00009878404],"about_ca_topic_score_codex":0.000061737046,"about_ca_topic_score_gemma":0.00039734042,"teacher_disagreement_score":0.2745198,"about_ca_system_score_codex":0.000022717088,"about_ca_system_score_gemma":0.0000049589885,"threshold_uncertainty_score":0.99807876},"labels":[],"label_agreement":null},{"id":"W7017661305","doi":"","title":"Biodegradation and bioremediation of N-nitrosodimethyl-amine(NDM)","year":2007,"lang":"en","type":"article","venue":"NPARC","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Bioremediation; Biodegradation; Cometabolism; Contamination; Bacteria","score_opus":0.007213640538688842,"score_gpt":0.2127737036475852,"score_spread":0.20556006310889635,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7017661305","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98805237,0.000008397871,0.0007203553,0.0001867397,0.000084185485,0.00009277558,0.000009471253,0.000015506532,0.010830195],"genre_scores_gemma":[0.99458086,0.000029659837,0.00507976,0.00009223007,0.00002221497,3.688433e-7,0.000015530932,0.0000036503009,0.00017570391],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993812,0.000014725263,0.00017657006,0.00013116693,0.00017531247,0.000121034136],"domain_scores_gemma":[0.9997292,0.000032246346,0.000088208595,0.00008248453,0.000009530585,0.00005828915],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003628007,0.00006151842,0.00006935875,0.000037888916,0.000030203357,0.0000064733717,0.000058072532,0.000052887506,0.0012271013],"category_scores_gemma":[0.000050449973,0.000052748026,0.000016574186,0.0001807797,0.000113727896,0.000093708026,0.000038065842,0.000037891987,0.00012722892],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010486153,0.000020808886,0.07071421,0.0000027952724,0.0000014761756,3.4901507e-7,0.0000970827,4.527119e-7,0.90628207,0.00005143516,0.00087699183,0.021941843],"study_design_scores_gemma":[0.00023645152,0.000043770287,0.30569312,0.0000031559705,0.0000056121407,0.0000013556075,0.00003433287,0.00010993504,0.69004506,0.00041377835,0.003331434,0.00008199865],"about_ca_topic_score_codex":0.00003075911,"about_ca_topic_score_gemma":0.00006884303,"teacher_disagreement_score":0.23497891,"about_ca_system_score_codex":0.000030051122,"about_ca_system_score_gemma":0.0000037847483,"threshold_uncertainty_score":0.9996859},"labels":[],"label_agreement":null},{"id":"W7017704699","doi":"","title":"Biodegradation of fuel oxygenates by MTBE-degrading microorganisms","year":2004,"lang":"en","type":"article","venue":"NPARC","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Oxygenate; Cometabolism; Biodegradation; Gasoline; Microorganism; Ether; Degradation (telecommunications); Diesel fuel","score_opus":0.0055189816407778735,"score_gpt":0.18900782781717104,"score_spread":0.18348884617639316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7017704699","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99080783,0.000025748048,0.00031118168,0.0007386019,0.000084183324,0.00009654943,0.000035737772,0.000029679713,0.007870462],"genre_scores_gemma":[0.99497634,0.00004096562,0.004477615,0.00018547966,0.000010283597,7.1710724e-7,0.000027349866,0.0000070947603,0.00027416216],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99937063,0.000012424966,0.00015970044,0.00015877033,0.00015697702,0.00014151627],"domain_scores_gemma":[0.99974966,0.000007954678,0.00007758323,0.00010449468,0.000006226048,0.000054053],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000095486015,0.00008002634,0.00008212076,0.000019247593,0.00003886196,0.00001214049,0.00013258468,0.000052021947,0.003295498],"category_scores_gemma":[0.00001667129,0.00006901195,0.000030007925,0.00017248836,0.00009160484,0.00010055956,0.000042718755,0.00004503789,0.0005087756],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000038337384,0.000045749544,0.003306241,0.0000039247307,0.00000275182,3.87796e-7,0.00017390383,0.000004333121,0.989788,0.000085079184,0.0046198224,0.0019659558],"study_design_scores_gemma":[0.00029884343,0.000030210764,0.0044188965,0.0000059135236,0.0000041241938,0.0000018684962,0.000040212384,0.00000923748,0.98915976,0.00160089,0.004336451,0.00009357924],"about_ca_topic_score_codex":0.000088591325,"about_ca_topic_score_gemma":0.00003442068,"teacher_disagreement_score":0.0075963,"about_ca_system_score_codex":0.00009606561,"about_ca_system_score_gemma":0.000008765243,"threshold_uncertainty_score":0.99761564},"labels":[],"label_agreement":null},{"id":"W7020041202","doi":"","title":"Identifying the usefulness of microbial enumeration, diversity, and respiration for implementing strategies for intrinsic remediation","year":2001,"lang":"en","type":"other","venue":"Library and Archives Canada (Government of Canada)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Soil water; Environmental remediation; Contamination; Remedial action; Soil contamination; Microorganism; Agriculture; Bioremediation","score_opus":0.013229209895942366,"score_gpt":0.17502598720161103,"score_spread":0.16179677730566866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7020041202","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6660275,0.00074737606,0.0145964315,0.006128375,0.0020467106,0.006964685,0.006423954,0.00006635006,0.2969986],"genre_scores_gemma":[0.9633878,0.00022063748,0.0016140308,0.00056819845,0.00016392543,0.000013833316,0.00009639778,0.00005428837,0.03388089],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989399,0.000030358015,0.00022190687,0.00018199407,0.00047186864,0.00015397574],"domain_scores_gemma":[0.99942875,0.000097054835,0.00033796026,0.00008836834,5.774588e-7,0.000047316527],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000030859275,0.00012084522,0.0001479241,0.000018048637,0.0003188761,0.00002550238,0.00013077118,0.00003641589,0.00017110663],"category_scores_gemma":[0.0000044139365,0.00010240051,0.00002030871,0.000047989593,0.0000783023,0.0001860413,0.00028390437,0.000041124098,2.1029165e-9],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007425301,0.00007189558,0.16706064,0.0015439347,0.0002998722,0.0000051466554,0.0019432831,0.000052808944,0.5452475,0.031484697,0.20770463,0.04384305],"study_design_scores_gemma":[0.002129842,0.00018449147,0.061124112,0.0002853639,0.00018226984,0.000003458473,0.007093244,0.0006417285,0.22767568,0.0020425778,0.697881,0.0007562403],"about_ca_topic_score_codex":0.0068727364,"about_ca_topic_score_gemma":0.1722477,"teacher_disagreement_score":0.49017635,"about_ca_system_score_codex":0.000007913801,"about_ca_system_score_gemma":0.00016896993,"threshold_uncertainty_score":0.9997406},"labels":[],"label_agreement":null},{"id":"W7020066748","doi":"","title":"La biodégradation d'hydrocarbures de pétrole à basse température","year":2000,"lang":"fr","type":"article","venue":"NPARC","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Context (archaeology); Line (geometry); Work (physics)","score_opus":0.004903151057651535,"score_gpt":0.2079839986248893,"score_spread":0.20308084756723777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7020066748","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7920442,0.00045960429,0.000051074385,0.009651911,0.0003027619,0.00016763469,0.00012333326,0.000051719257,0.19714773],"genre_scores_gemma":[0.94137025,0.0012132889,0.0025241764,0.0013678386,0.00017090146,0.0000025348102,0.000035428417,0.000014836995,0.053300776],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986806,0.00020757929,0.0001920007,0.00029323137,0.00024508065,0.00038152034],"domain_scores_gemma":[0.99951553,0.00003821178,0.000055136046,0.000199958,0.000005873758,0.00018526119],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00031861934,0.00016974365,0.000122498,0.000025412883,0.00011341359,0.000083993036,0.0002043161,0.0003034328,0.119577706],"category_scores_gemma":[0.000024028117,0.00016322845,0.00007269784,0.0002494401,0.00024059924,0.0002006868,0.00003302437,0.00024701824,0.006768355],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026109656,0.00013329927,0.0062953075,0.000013186129,0.000010353765,0.000018089948,0.00035651342,0.00007801833,0.71338683,0.00021966101,0.109817736,0.16964486],"study_design_scores_gemma":[0.00039451895,0.000056081055,0.032369543,0.000040819366,0.000026691292,0.00003541514,0.000046806443,0.0014797245,0.074656375,0.0009508445,0.8896768,0.00026639563],"about_ca_topic_score_codex":0.00020122172,"about_ca_topic_score_gemma":0.00019127651,"teacher_disagreement_score":0.77985907,"about_ca_system_score_codex":0.00018420671,"about_ca_system_score_gemma":0.000038539903,"threshold_uncertainty_score":0.99400496},"labels":[],"label_agreement":null},{"id":"W7020752591","doi":"","title":"Maximizing biodegradation of chlorinated paraffins in a cyclic batch bioreactor","year":2003,"lang":"en","type":"dissertation","venue":"eScholarship@McGill (McGill)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Biodegradation; Axenic; Pseudomonas; Degradation (telecommunications); Bioreactor; Work (physics); Bioremediation","score_opus":0.013969450399673176,"score_gpt":0.22233342874100848,"score_spread":0.2083639783413353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7020752591","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96474814,0.000070363254,4.3020165e-8,0.000012990522,0.0007707124,0.00065172685,0.00066607614,0.00008231143,0.032997627],"genre_scores_gemma":[0.99424064,0.00049462786,0.00045261026,0.00011307559,0.000009962761,0.000029497509,0.0013602426,0.00008772455,0.003211598],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996281,0.00025680626,0.0011213662,0.0009673438,0.0007412506,0.00063221814],"domain_scores_gemma":[0.998293,0.000084140964,0.0008082561,0.00052522,0.000065768974,0.0002236024],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006978823,0.0006168305,0.0006656063,0.00036582927,0.0002457053,0.00003876818,0.00055034406,0.00079865893,0.0022083547],"category_scores_gemma":[0.00041093034,0.0006271486,0.00022671063,0.0013194086,0.00008868215,0.00057573756,0.0000942219,0.0008083663,0.00076830585],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015929411,0.00037490448,0.0026884389,0.00010327397,0.000037986487,0.00001904825,0.00001526711,0.00002086219,0.9403058,0.0006466906,0.000016691956,0.055611707],"study_design_scores_gemma":[0.0013408668,0.00012393319,0.052059513,0.00027071068,0.00007640091,0.000007802894,0.0001634524,0.000022437373,0.91467047,0.00072237226,0.029474253,0.0010677925],"about_ca_topic_score_codex":0.0014091666,"about_ca_topic_score_gemma":0.006971875,"teacher_disagreement_score":0.054543912,"about_ca_system_score_codex":0.0008665399,"about_ca_system_score_gemma":0.000030874762,"threshold_uncertainty_score":0.999618},"labels":[],"label_agreement":null},{"id":"W7020880738","doi":"","title":"Microbial responses to the biostimulation of Subartic hydrocarbon-contaminated soil under seasonal freeze-thaw conditions","year":2010,"lang":"en","type":"dissertation","venue":"eScholarship@McGill (McGill)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Indigenous and Northern Affairs Canada","keywords":"Biostimulation; Mesocosm; Biodegradation; Hydrocarbon; Microcosm; Soil contamination; Population; Mineralization (soil science); Soil microbiology; Microbial population biology","score_opus":0.010190044479975622,"score_gpt":0.23252646339424315,"score_spread":0.22233641891426753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7020880738","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9858133,0.00001855561,3.3299855e-7,0.00016345973,0.0011318845,0.0009277442,0.004003475,0.00009638292,0.007844871],"genre_scores_gemma":[0.99159527,0.000019422267,0.00015208276,0.00069306704,0.0000442582,0.00003615422,0.0018600097,0.00008454808,0.005515214],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99655384,0.00039324487,0.0008325053,0.0008352232,0.000806007,0.00057916035],"domain_scores_gemma":[0.998,0.00030078826,0.00057497766,0.0006688427,0.00013936072,0.00031601673],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00079951406,0.00056239095,0.0004779962,0.0002078945,0.0008337873,0.0000701945,0.00074973813,0.0007624758,0.003968122],"category_scores_gemma":[0.0006121645,0.0004831026,0.000273937,0.0007940802,0.00020811264,0.0003551119,0.00017874633,0.0009939639,0.0015944067],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033674095,0.00016312634,0.0008018246,0.000029043673,0.000057333982,0.0000064727674,0.000023959961,0.000231964,0.99436617,0.00065518986,0.0001279133,0.0032002449],"study_design_scores_gemma":[0.000906301,0.00017539963,0.16524613,0.00013621208,0.00020887675,0.00001481754,0.00017675706,0.00009461104,0.81939226,0.0010564609,0.011760975,0.00083116896],"about_ca_topic_score_codex":0.0013873759,"about_ca_topic_score_gemma":0.033522956,"teacher_disagreement_score":0.1749739,"about_ca_system_score_codex":0.00038981313,"about_ca_system_score_gemma":0.00006245127,"threshold_uncertainty_score":0.99976206},"labels":[],"label_agreement":null},{"id":"W7024031673","doi":"","title":"Potential BTEX natural attenuation in gas storage aquifers","year":2013,"lang":"fr","type":"other","venue":"theses.fr (ABES)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"BTEX; Pollution prevention; Air pollutants; Brazil nut","score_opus":0.0066535971882416755,"score_gpt":0.20307842332479142,"score_spread":0.19642482613654974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7024031673","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6385805,0.0005904778,0.00008651242,0.0015231513,0.0034110432,0.00127095,0.00014632381,0.000090183494,0.3543009],"genre_scores_gemma":[0.9004893,0.0005604527,0.0003165578,0.00055397575,0.00046439748,0.000012361511,0.00012642237,0.00012780257,0.09734875],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99686193,0.00031483732,0.00056469097,0.00078332506,0.0006807355,0.00079445285],"domain_scores_gemma":[0.99880964,0.00006135433,0.00038243874,0.00049253576,0.000021659282,0.00023238773],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00039737351,0.00057701505,0.00049658335,0.00019699178,0.000109767476,0.00013601882,0.000647538,0.0005929187,0.24510203],"category_scores_gemma":[0.00009199371,0.0005156341,0.00018045382,0.0004012431,0.0004726352,0.0003345034,0.00026732057,0.00061873853,0.055268575],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012353125,0.0007597661,0.019882018,0.00016243913,0.000138522,0.00013313274,0.0050060716,0.00050814025,0.8039734,0.0019202493,0.047699776,0.119692996],"study_design_scores_gemma":[0.0030799343,0.00021551942,0.2727533,0.00067452074,0.00017701734,0.000050730963,0.0021928593,0.009366025,0.01572116,0.0002620124,0.69282,0.002686904],"about_ca_topic_score_codex":0.009563149,"about_ca_topic_score_gemma":0.0039452435,"teacher_disagreement_score":0.7882522,"about_ca_system_score_codex":0.00079101877,"about_ca_system_score_gemma":0.00004676969,"threshold_uncertainty_score":0.9997295},"labels":[],"label_agreement":null},{"id":"W7025069282","doi":"","title":"Ultrastructure of a bio-electrolytic methanogenic-methanotrophic granular biofilm for the complete degradation of tetrachloroethylene in contaminated groundwater","year":2006,"lang":"en","type":"article","venue":"NPARC","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Tetrachloroethylene; Biofilm; Contamination; Groundwater; Degradation (telecommunications); Ultrastructure","score_opus":0.009670653809789523,"score_gpt":0.20897719073590781,"score_spread":0.1993065369261183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7025069282","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99703294,0.000041403422,0.0018706664,0.00025980797,0.00006173665,0.00046488803,0.00007753738,0.000009128546,0.00018190894],"genre_scores_gemma":[0.9975424,0.000019426016,0.0021910244,0.000049488644,0.000014154246,0.000008867849,0.00006766794,0.000009508878,0.00009746243],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99894154,0.00006803983,0.0003657904,0.0001937908,0.00021080644,0.00022005857],"domain_scores_gemma":[0.9994786,0.00012929154,0.00017835935,0.000167717,0.000023515106,0.00002255304],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031916262,0.00012253017,0.00019995145,0.000058787755,0.000040626444,0.00000768626,0.00021033645,0.0000862501,0.0006675771],"category_scores_gemma":[0.000037128353,0.000081443526,0.00008180387,0.00035144886,0.00020254857,0.000067816676,0.000025769243,0.00008308677,0.000008427208],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007412887,0.000059786194,0.013858546,0.000014090035,0.000008436098,4.0965304e-7,0.000050288134,0.00006313038,0.9829732,0.00009443908,0.00009621871,0.0027072805],"study_design_scores_gemma":[0.00071492535,0.00011357798,0.17590208,0.0000073774036,0.000026967777,0.000002606538,0.000021956663,0.0010163977,0.8209709,0.0008477685,0.00028630413,0.000089158675],"about_ca_topic_score_codex":0.0006444932,"about_ca_topic_score_gemma":0.00067024323,"teacher_disagreement_score":0.16204354,"about_ca_system_score_codex":0.00006524515,"about_ca_system_score_gemma":0.000010665465,"threshold_uncertainty_score":0.73095006},"labels":[],"label_agreement":null},{"id":"W7026688314","doi":"","title":"AI Eye Episode 436: Microsoft Canada Announces Canada Skills Program to Improve AI Skills","year":2020,"lang":"en","type":"other","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"MEDLINE; Attendance; The Internet; Training (meteorology)","score_opus":0.002010477769957522,"score_gpt":0.20681513818122255,"score_spread":0.20480466041126502,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7026688314","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0045982474,0.000225335,0.000087577064,0.068573944,0.0074111475,0.007209686,0.009865002,0.0008757048,0.9011533],"genre_scores_gemma":[0.005558192,0.00004155977,0.0018784378,0.076875955,0.0003028507,0.000036687226,0.00032250676,0.00022058666,0.9147632],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99719745,0.000042192663,0.00039428013,0.00088322593,0.00077428046,0.00070854224],"domain_scores_gemma":[0.9987188,0.000021265821,0.00019474927,0.00040259812,0.000016037478,0.00064652745],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00007270444,0.00052233203,0.0004534591,0.000037033245,0.00008846321,0.00009487877,0.00067786727,0.00024927434,0.029925462],"category_scores_gemma":[0.000055207984,0.00042865257,0.00007001515,0.00039154204,0.000106490486,0.000056547902,0.00028663545,0.0002991242,0.00085154915],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000035281528,0.00007436781,0.005162966,0.000023169232,0.000030033625,0.000030215951,0.00002416633,0.0000039784536,0.008838042,0.0000013997625,0.9777966,0.008011518],"study_design_scores_gemma":[0.0001901771,0.00006142858,0.0017740276,0.000033800796,0.00001544107,0.0000012311743,0.000016631506,0.000009447377,0.0071272366,0.000001535556,0.99013466,0.0006344129],"about_ca_topic_score_codex":0.99824566,"about_ca_topic_score_gemma":0.99992085,"teacher_disagreement_score":0.029073913,"about_ca_system_score_codex":0.0010307535,"about_ca_system_score_gemma":0.0011219003,"threshold_uncertainty_score":0.9999264},"labels":[],"label_agreement":null},{"id":"W7026899457","doi":"","title":"Bioremediation of urban soils polluted with non-conventional petroleum in the Canadian context","year":2015,"lang":"en","type":"article","venue":"e_Buah","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Bioremediation; Context (archaeology); Petroleum; Soil water; Soil contamination","score_opus":0.013341928816774047,"score_gpt":0.20309129867823233,"score_spread":0.1897493698614583,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7026899457","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98716646,0.000013118956,0.00001940414,0.0016501533,0.000105451145,0.00016439796,0.000031361826,0.0000052610553,0.010844375],"genre_scores_gemma":[0.99883467,9.107359e-7,0.00008514728,0.0006714469,0.000031401047,0.0000031724298,0.000030574007,0.0000040018467,0.00033870028],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99923986,0.0000430126,0.00014533785,0.000118119366,0.00029122876,0.00016243235],"domain_scores_gemma":[0.9996752,0.000012900904,0.00007233731,0.00011432107,0.000014122902,0.000111130714],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031671283,0.00006941949,0.000076628006,0.000051257495,0.000038839942,0.000015984368,0.00016291517,0.000047231075,0.0005316525],"category_scores_gemma":[0.000025110765,0.000045201516,0.000020204554,0.00021715443,0.00011615496,0.000084374995,0.000014494761,0.00006710657,0.00029053882],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007738004,0.00012999438,0.88350904,0.0000050609933,0.00001221634,0.000013037405,0.0035867833,0.00017403798,0.026455466,0.0002732215,0.08462244,0.0011413036],"study_design_scores_gemma":[0.001692811,0.00014640656,0.95399487,0.000015638601,0.000009160978,0.000006628762,0.00086448586,0.0005562762,0.008634098,0.000061619765,0.033838842,0.00017915049],"about_ca_topic_score_codex":0.06022004,"about_ca_topic_score_gemma":0.56391084,"teacher_disagreement_score":0.50369084,"about_ca_system_score_codex":0.00018161869,"about_ca_system_score_gemma":0.000103483835,"threshold_uncertainty_score":0.946038},"labels":[],"label_agreement":null},{"id":"W7034493895","doi":"","title":"From Temporary Foreign Workers to Permanent Residents: Differences in Transition Rates Among Work Permit Categories","year":2023,"lang":"en","type":"article","venue":"Project Muse (Johns Hopkins University)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Economic shortage; Immigration; Work (physics); Destinations; Foreign exchange","score_opus":0.01904255905852253,"score_gpt":0.21279506697047132,"score_spread":0.19375250791194878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7034493895","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9663652,4.8875535e-7,0.000026637408,0.00034473956,0.00011140484,0.0004724051,0.00005402838,0.0001382979,0.0324868],"genre_scores_gemma":[0.99702686,0.002473975,0.00009304796,0.000105309795,0.000038139315,0.0000027705846,0.00011894493,0.000013645927,0.00012727671],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986201,0.00012567687,0.00018186071,0.00046077705,0.00027240897,0.00033918268],"domain_scores_gemma":[0.9995586,0.00005838949,0.000067125635,0.00019301994,0.000009953526,0.000112904876],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013403082,0.00019512388,0.00018903126,0.0021896693,0.00013097112,0.00005873892,0.00033886,0.000112509035,0.00044633087],"category_scores_gemma":[0.000020488726,0.0001892582,0.00006606907,0.008033152,0.00012730515,0.00046215445,0.00017633596,0.0001387908,0.00045936942],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018049667,0.00006986662,0.98409206,0.000007757169,0.000017234088,0.00016275882,0.010881249,0.00008904285,0.0005162992,0.000006449132,0.0024744843,0.0015023218],"study_design_scores_gemma":[0.0007434258,0.00007409996,0.94277954,0.000101477475,0.00002450749,6.209671e-7,0.013931883,0.00010861584,0.002151967,0.0000061509018,0.039638057,0.00043963018],"about_ca_topic_score_codex":0.20788786,"about_ca_topic_score_gemma":0.051022667,"teacher_disagreement_score":0.1568652,"about_ca_system_score_codex":0.00027507995,"about_ca_system_score_gemma":0.000042361655,"threshold_uncertainty_score":0.9662937},"labels":[],"label_agreement":null},{"id":"W7042553247","doi":"","title":"Phytoremédiation d’un sol contaminé par des contaminants organiques et inorganiques","year":2021,"lang":"fr","type":"dissertation","venue":"Papyrus : Institutional Repository (Université de Montréal)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pollution prevention; Panache; Production system (computer science); Petroleum","score_opus":0.005169883800183243,"score_gpt":0.17402164577412196,"score_spread":0.16885176197393872,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7042553247","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97474277,0.008874066,0.00027571977,0.0003075944,0.0013480188,0.00055926014,0.0002655051,0.00013780294,0.013489285],"genre_scores_gemma":[0.96869975,0.0046025957,0.0016152196,0.00047858118,0.00015014432,0.000008861643,0.0013941856,0.000053641135,0.022997046],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996471,0.0004871029,0.0006526332,0.00094689336,0.0007984335,0.00064395997],"domain_scores_gemma":[0.99803627,0.00011695156,0.00069579895,0.00040456303,0.0002954524,0.00045095236],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00035265856,0.000662926,0.0005824503,0.0001535251,0.0056008757,0.0001571101,0.0004926507,0.0007664435,0.0019214463],"category_scores_gemma":[0.00014612958,0.0007608607,0.00029973834,0.00040599017,0.00064159953,0.0008177402,0.0002894808,0.0005174641,0.00056077243],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026419532,0.00039183084,0.17728065,0.00013911747,0.00027164456,0.0010854289,0.054476984,0.00006911704,0.7583775,0.00085875,0.0012727106,0.005512109],"study_design_scores_gemma":[0.00072479574,0.00011282843,0.47163478,0.00027939575,0.00021839427,0.0002838823,0.01307041,0.00014381383,0.50001353,0.000092832845,0.012800638,0.00062469864],"about_ca_topic_score_codex":0.05764035,"about_ca_topic_score_gemma":0.075088404,"teacher_disagreement_score":0.29435414,"about_ca_system_score_codex":0.008080352,"about_ca_system_score_gemma":0.0013109003,"threshold_uncertainty_score":0.99948424},"labels":[],"label_agreement":null},{"id":"W7067953915","doi":"","title":"Nucleation and growth of structure I xenon hydrate on the surface of ice, hyperpolarized ¹²§9Xe and ¹H NMR studies","year":2000,"lang":"en","type":"other","venue":"Library and Archives Canada (Government of Canada)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Xenon; Nucleation; Hydrate; Surface (topology); Isotopes of xenon; Clathrate hydrate","score_opus":0.003177618420484133,"score_gpt":0.138337827820145,"score_spread":0.13516020939966086,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7067953915","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.663613,0.0007022439,7.128039e-7,0.0017783534,0.00008981358,0.0003505896,0.0013689629,0.000006798413,0.33208948],"genre_scores_gemma":[0.97158355,0.0018120992,0.00020183499,0.0005571521,0.000017876304,4.4900995e-7,0.000008910702,0.00003496003,0.025783168],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986934,0.00006447786,0.00020499862,0.00020639652,0.0007002026,0.00013053893],"domain_scores_gemma":[0.99939376,0.0001417857,0.00026049456,0.00012482899,2.5029124e-7,0.000078880075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000011195618,0.00018073633,0.00027764202,0.0000138312735,0.000063654785,0.0000075008165,0.00012287726,0.000047827412,0.00047289385],"category_scores_gemma":[0.0000040934615,0.0001255019,0.000014650185,0.00005897105,0.00023821232,0.00007366092,0.000102248974,0.00009080867,6.668382e-9],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000804218,0.00005817608,0.06997312,0.00067512237,0.0003720886,0.000013853839,0.0005802869,0.00003708187,0.8583312,0.007207616,0.057554137,0.0043931017],"study_design_scores_gemma":[0.001920279,0.00042495012,0.20569554,0.000994287,0.00019166704,0.0000065207446,0.0024338686,0.0005478785,0.65953374,0.0014068506,0.12574643,0.0010979802],"about_ca_topic_score_codex":0.004833992,"about_ca_topic_score_gemma":0.025526786,"teacher_disagreement_score":0.30797052,"about_ca_system_score_codex":0.00000509228,"about_ca_system_score_gemma":0.00007756754,"threshold_uncertainty_score":0.9922548},"labels":[],"label_agreement":null},{"id":"W7069452296","doi":"","title":"Project Planning","year":2000,"lang":"en","type":"article","venue":"PDXScholar  (Portland State University)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Project planning; Project management; Schedule; Product (mathematics); Project management triangle; Investment (military); Product cost management; Quarter (Canadian coin)","score_opus":0.009765515407146833,"score_gpt":0.19323082461510002,"score_spread":0.18346530920795318,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7069452296","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87384284,0.000005281957,0.00003454653,0.00004721991,0.00003575294,0.00010163864,0.000022011878,0.00005348969,0.12585722],"genre_scores_gemma":[0.9343232,0.0001229744,0.0004091384,0.00018456223,0.00001665321,9.58628e-8,0.000032492473,0.000008245434,0.06490263],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99929166,0.000039650447,0.00008792357,0.00022258748,0.00015002668,0.00020812581],"domain_scores_gemma":[0.9997419,0.0000083386585,0.000037125268,0.000120767836,0.0000052129376,0.0000866529],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00011254468,0.000094126466,0.00008229392,0.000056016062,0.00015027705,0.00003171728,0.00016607365,0.000041854437,0.009007977],"category_scores_gemma":[0.000005786051,0.00008801142,0.00003696012,0.00032309283,0.00005485222,0.00032875946,0.000044364668,0.000121197285,0.0010563013],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041344404,0.00021405042,0.8612836,0.000011780176,0.00005084487,0.0009646602,0.0028290239,0.0014216602,0.031896543,0.000029416573,0.03874373,0.06214126],"study_design_scores_gemma":[0.00047506113,0.000036076057,0.054991625,0.0000057781294,0.000008497079,0.000007358222,0.00008979684,0.00011782711,0.0010264985,0.000011437518,0.94305384,0.00017620984],"about_ca_topic_score_codex":0.0001798102,"about_ca_topic_score_gemma":0.000071825576,"teacher_disagreement_score":0.9043101,"about_ca_system_score_codex":0.00007300868,"about_ca_system_score_gemma":0.000014595387,"threshold_uncertainty_score":0.99972147},"labels":[],"label_agreement":null},{"id":"W7070476278","doi":"","title":"Pathway for biodegradation of hexahydro-1, 3, 5-trinitro-1, 3, 5-triazine (RDX) in stringent anaerobic bacteria isolated from anaerobic sludge","year":2003,"lang":"en","type":"article","venue":"NPARC","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Anaerobic exercise; Biodegradation; Bacteria; Sewage sludge; Anaerobic bacteria; Microorganism","score_opus":0.014998789963460357,"score_gpt":0.21799437760938192,"score_spread":0.20299558764592157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7070476278","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973504,0.000023256722,0.0004282755,0.00012547917,0.00025873058,0.0005555641,0.00024252509,0.000029447549,0.0009863477],"genre_scores_gemma":[0.9896298,0.000053502463,0.009781561,0.00010052673,0.000021531252,0.00001152785,0.00023238381,0.000016946642,0.00015221816],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984402,0.00010904011,0.00052108563,0.0003979363,0.00020495104,0.0003268055],"domain_scores_gemma":[0.99931204,0.00006966281,0.00022175773,0.00027153804,0.000019645697,0.000105341824],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003461003,0.0001951235,0.00027513417,0.000091284564,0.00005023623,0.000021111171,0.00019801711,0.00014486104,0.0043785335],"category_scores_gemma":[0.00010726546,0.00018153373,0.00008317961,0.00046966042,0.00007507763,0.00016391333,0.00004955328,0.00009963318,0.00014009197],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008983247,0.00016002505,0.012439026,0.000006856674,0.000011213643,0.0000014093206,0.000111550115,0.000027684497,0.9841332,0.000091755006,0.0006984913,0.002228986],"study_design_scores_gemma":[0.0025532146,0.00020991373,0.06301296,0.000027628465,0.000018087987,0.000001115034,0.000048636044,0.0005892811,0.92167044,0.00066678127,0.01087249,0.00032946485],"about_ca_topic_score_codex":0.0001795619,"about_ca_topic_score_gemma":0.0005655285,"teacher_disagreement_score":0.062462743,"about_ca_system_score_codex":0.00017649739,"about_ca_system_score_gemma":0.00003483758,"threshold_uncertainty_score":0.9965316},"labels":[],"label_agreement":null},{"id":"W7071000704","doi":"","title":"Revegetation and reclamation of oil sands process-affected material using «Frankia»-inocculated alders: field and greenhouse trials","year":2009,"lang":"en","type":"dissertation","venue":"eScholarship@McGill (McGill)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Resources Canada; Syncrude","keywords":"Land reclamation; Revegetation; Oil sands; Greenhouse; Field (mathematics)","score_opus":0.020622596837884692,"score_gpt":0.26542438156944403,"score_spread":0.24480178473155934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7071000704","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99603033,0.00007164382,2.5392328e-7,0.000019483281,0.00040460782,0.00051993376,0.00035753628,0.00008534812,0.0025108482],"genre_scores_gemma":[0.99757725,0.0003872718,0.00064147747,0.00013976739,0.000031948824,0.0000094515535,0.0008082104,0.000050650793,0.00035395587],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99680316,0.00051814684,0.0011229475,0.0007040604,0.0005277706,0.0003238973],"domain_scores_gemma":[0.99816537,0.00014349668,0.0011629113,0.00025372318,0.00010995976,0.00016455076],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013310061,0.00047434957,0.0008021739,0.00019014483,0.0003304089,0.00008356226,0.00018740464,0.0007839949,0.00057105743],"category_scores_gemma":[0.0010988914,0.00045011067,0.00012261825,0.00042854302,0.00006952904,0.00068525126,0.000050032533,0.00036794675,0.000020507929],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041267392,0.00006890618,0.0001582882,0.0003138569,0.00004870884,0.000004348517,0.00003311718,0.000016747439,0.8593119,0.000038108104,0.0000061579753,0.1395872],"study_design_scores_gemma":[0.0017846755,0.00028117598,0.01844576,0.0006291603,0.00035997562,0.000018323548,0.00011130323,0.00017205105,0.97530264,0.0017363481,0.00038878844,0.00076979934],"about_ca_topic_score_codex":0.0005882996,"about_ca_topic_score_gemma":0.0010840873,"teacher_disagreement_score":0.1388174,"about_ca_system_score_codex":0.00019600001,"about_ca_system_score_gemma":0.000020915593,"threshold_uncertainty_score":0.9997951},"labels":[],"label_agreement":null},{"id":"W7084034678","doi":"10.46692/9781529214345.004","title":"Using Institutional Ethnography: University Audit Culture as People’s Textually Mediated Activities","year":2025,"lang":"en","type":"other","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Audit; Government (linguistics); Work (physics); Information technology audit","score_opus":0.01225346285878678,"score_gpt":0.22920467295741626,"score_spread":0.21695121009862947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7084034678","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0020244846,0.00003163114,0.00026768056,0.000120378616,0.00030539953,0.00020271711,0.00045322938,0.00018168295,0.9964128],"genre_scores_gemma":[0.009313656,0.00030608368,0.001675791,0.00053019717,0.000061455925,2.483968e-7,0.00023558595,0.00003510692,0.9878419],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990517,0.00004901323,0.00009697043,0.00032696806,0.0002865305,0.00018880791],"domain_scores_gemma":[0.99962986,0.00001679713,0.00011201264,0.00015041484,0.000006533902,0.000084379266],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00005777747,0.00021668097,0.00018749626,0.00014008042,0.00013163054,0.00002072436,0.0002494533,0.00038211452,0.08365352],"category_scores_gemma":[0.000024186824,0.00018716973,0.00009315685,0.00044535453,0.0002543032,0.0000921965,0.00018644199,0.00018352678,0.0010970057],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018846109,0.00007086744,0.0042188843,0.000022687735,0.00007750044,0.000013994132,0.00020880772,0.000020193056,0.017352685,0.0005459146,0.97696835,0.00048129255],"study_design_scores_gemma":[0.00024988715,0.000012471845,0.0012882223,0.000051191022,0.00003205411,0.0000023129928,0.00025024975,0.000027527916,0.0002724722,0.000012630977,0.99752223,0.00027876665],"about_ca_topic_score_codex":0.00617246,"about_ca_topic_score_gemma":0.017074563,"teacher_disagreement_score":0.08255651,"about_ca_system_score_codex":0.00020073236,"about_ca_system_score_gemma":0.00014724486,"threshold_uncertainty_score":0.99968076},"labels":[],"label_agreement":null},{"id":"W7084093649","doi":"10.64628/aam.cnw6tsjyd","title":"Struggling with money? Here are 5 tips for growing your income from a financial expert","year":2025,"lang":"en","type":"article","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Financial plan; Work (physics); Payment; Government (linguistics)","score_opus":0.01089509742634311,"score_gpt":0.23033978465610594,"score_spread":0.21944468722976282,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7084093649","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920132,0.000028816123,0.004602255,0.0007362627,0.00015280588,0.00022093415,0.000044604585,0.000049743143,0.002151389],"genre_scores_gemma":[0.9901322,0.000007287899,0.0070222043,0.001715772,0.000051426094,0.0000086907485,0.000013663434,0.0000061735964,0.0010425661],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99932957,0.000010661493,0.00013321823,0.00024109185,0.000113262235,0.00017220643],"domain_scores_gemma":[0.99975467,0.000028616529,0.000043990563,0.000118704455,0.0000070498013,0.000046988214],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005984881,0.000102034355,0.000112550486,0.000017927672,0.00010903306,0.00003159327,0.00013791338,0.00006513045,0.0008196386],"category_scores_gemma":[0.000033334967,0.000075007716,0.00003525157,0.00014026674,0.000037381335,0.00015893226,0.00007723093,0.000054107328,0.00007455499],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029588156,0.00013006642,0.4447092,0.000019426014,0.000032534914,0.000009753282,0.00075125106,0.0001840342,0.5079749,0.00020631113,0.019895317,0.025791265],"study_design_scores_gemma":[0.005645408,0.0002375312,0.3663546,0.00037881683,0.000056151628,0.0000028583677,0.00464692,0.0045930347,0.49156207,0.0015457821,0.12365849,0.0013183163],"about_ca_topic_score_codex":0.00048066347,"about_ca_topic_score_gemma":0.0007997052,"teacher_disagreement_score":0.10376318,"about_ca_system_score_codex":0.00007665076,"about_ca_system_score_gemma":0.000016491458,"threshold_uncertainty_score":0.8974468},"labels":[],"label_agreement":null},{"id":"W7095751373","doi":"","title":"tfdA-like genes in 2,4dichlorophenoxyacetic acid-degrading bacteria belonging to the Bradyrhizobium-Agromonas-Nitrobacter-Afipia cluster in �-proteobacteria. Applied and Environmental Microbiology 68","year":2002,"lang":"en","type":"article","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Gene; Gene cluster; Proteobacteria; Bacteria; 16S ribosomal RNA; Sequence analysis; Escherichia coli; Peptide sequence; Sequence alignment","score_opus":0.006739790848356284,"score_gpt":0.1711740216866495,"score_spread":0.1644342308382932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7095751373","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965769,0.0000701588,0.000030258465,0.001282347,0.00021976912,0.00089442916,0.000044420605,0.000031323696,0.00085038616],"genre_scores_gemma":[0.99590117,0.00009009996,0.0011469967,0.0020639717,0.00005355229,0.000037763253,0.000046479923,0.000027518114,0.0006324301],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99784553,0.0001368874,0.00050122995,0.0007009331,0.00014403231,0.00067136623],"domain_scores_gemma":[0.9993471,0.000047299993,0.000102909806,0.00033353752,0.0000020855741,0.00016708636],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003568521,0.0003506934,0.0003151048,0.00013100187,0.0001419277,0.00009189851,0.00039086305,0.0001730535,0.008448124],"category_scores_gemma":[0.000012052962,0.00026179734,0.00004583034,0.00033844332,0.00021799492,0.00018565271,0.0004816419,0.00022767589,0.0015558827],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045029905,0.000089412766,0.05145017,0.0000049852574,0.0000058565142,0.00000581246,0.0008383225,0.000014028338,0.94354576,0.0000046532664,0.0005288941,0.0034670867],"study_design_scores_gemma":[0.0033979488,0.00021266792,0.68791753,0.000051988212,0.00002592125,0.00013886299,0.0008171103,0.0010067899,0.27366838,0.00003371532,0.031277332,0.0014517192],"about_ca_topic_score_codex":0.00023264933,"about_ca_topic_score_gemma":0.0019578245,"teacher_disagreement_score":0.66987735,"about_ca_system_score_codex":0.0003396565,"about_ca_system_score_gemma":0.0000046430864,"threshold_uncertainty_score":0.99998343},"labels":[],"label_agreement":null},{"id":"W7095840834","doi":"","title":"Grenade range managment using lime for dual role of metals immobilization and explosives transformation","year":2008,"lang":"en","type":"article","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Explosive material; Lime; Environmental remediation; Contamination; Groundwater remediation; Unexploded ordnance; Soil water","score_opus":0.02554533357839088,"score_gpt":0.22380835734300863,"score_spread":0.19826302376461774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7095840834","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99597436,0.000042992466,0.0028888786,0.000060778468,0.000020843549,0.00033852705,0.000014704883,0.000010572786,0.00064832653],"genre_scores_gemma":[0.9974758,0.00012575217,0.0022400273,0.000053371197,0.000007024661,0.0000036638994,0.000013373476,0.0000035646485,0.000077444405],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995521,0.000013390726,0.00015825644,0.00009422897,0.00010100273,0.000081048696],"domain_scores_gemma":[0.99985516,0.000011041034,0.000052471798,0.000044167384,0.000006623566,0.000030531046],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000079705365,0.000056126075,0.00007980189,0.00002167679,0.000059933507,0.000004616055,0.00002731614,0.000029247894,0.00039767395],"category_scores_gemma":[0.000005484284,0.000045124885,0.000025661078,0.00006570302,0.000060666127,0.0002250519,0.0000134027405,0.000011370158,0.000008297122],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020127869,0.000035702178,0.003369164,0.000012351956,0.0000059720846,1.1014867e-7,0.0013469915,0.00012086599,0.9935604,0.00006338532,0.00005645346,0.0014084886],"study_design_scores_gemma":[0.00067307847,0.000079087804,0.022496693,0.000007947063,0.000023020004,0.0000075812623,0.00055016787,0.008490044,0.9663966,0.000097053635,0.0010560604,0.00012266701],"about_ca_topic_score_codex":0.00005598557,"about_ca_topic_score_gemma":0.000038310012,"teacher_disagreement_score":0.027163787,"about_ca_system_score_codex":0.000023711435,"about_ca_system_score_gemma":0.000003216413,"threshold_uncertainty_score":0.4354251},"labels":[],"label_agreement":null},{"id":"W7096611145","doi":"","title":"Massive dominance of Epsilonproteobacteria in formation waters from a Canadian oil sands reservoir containing severely biodegraded oil","year":2012,"lang":"en","type":"article","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Oil sands; Dominance (genetics); Petroleum; Petroleum reservoir; Crude oil; Asphalt; Shale oil; Tidal flat","score_opus":0.013959875107929776,"score_gpt":0.2080469005090828,"score_spread":0.19408702540115302,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7096611145","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915976,0.000011683587,0.000008541988,0.0005500873,0.00012924218,0.000053316304,0.000097600176,0.000010029555,0.0075418786],"genre_scores_gemma":[0.997829,0.000029312876,0.0012551442,0.00027428698,0.00001655416,0.000005555077,0.00008408261,0.0000059342474,0.0005001355],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990137,0.000053774736,0.00028538168,0.00014353268,0.0001439239,0.0003596546],"domain_scores_gemma":[0.9995382,0.000020263804,0.00011653175,0.00013785322,0.000008162094,0.00017900892],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00023560434,0.00011169236,0.00014707552,0.0000582807,0.00004751357,0.000016485725,0.0001483463,0.00009614232,0.0025766508],"category_scores_gemma":[0.000033509215,0.00009045124,0.000029735305,0.00018603052,0.00006705927,0.000517133,0.000050268758,0.0000734706,0.00026636024],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015950129,0.000048708982,0.3885558,0.000013766616,0.0000071452873,0.0000030613198,0.0041640783,0.000020054242,0.59806055,0.000020678124,0.001486047,0.007460626],"study_design_scores_gemma":[0.001190725,0.000043215667,0.6182085,0.00005986856,0.000006661262,0.0000017792397,0.0006950591,0.00030739134,0.37217736,0.000021026608,0.0070027965,0.00028559333],"about_ca_topic_score_codex":0.22498724,"about_ca_topic_score_gemma":0.23663187,"teacher_disagreement_score":0.22965273,"about_ca_system_score_codex":0.000339598,"about_ca_system_score_gemma":0.000025197367,"threshold_uncertainty_score":0.9983351},"labels":[],"label_agreement":null},{"id":"W7096694626","doi":"","title":"Altering Toluene 4-Monooxygenase by Active-Site Engineering for the Synthesis of 3-Methoxycatechol, Methoxyhydroquinone,","year":2004,"lang":"en","type":"article","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Toluene; Saturated mutagenesis; Benzene; Catalysis; Mutagenesis; Saturation (graph theory); Mutant; Burkholderia","score_opus":0.008758046094428215,"score_gpt":0.22153930727991245,"score_spread":0.21278126118548424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7096694626","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8617142,0.00005421459,0.1353705,0.00082676153,0.00015737265,0.00057260995,0.00013942015,0.000073634124,0.0010913295],"genre_scores_gemma":[0.96859145,0.000050312494,0.030983036,0.00017024661,0.000017644392,0.000023724522,0.0000043821906,0.000014399725,0.00014479824],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99918723,0.000016155811,0.00021526817,0.00021264575,0.0001480835,0.00022058969],"domain_scores_gemma":[0.99941295,0.00022377151,0.000083378174,0.00020637497,0.00000807466,0.000065433014],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035054178,0.00012549119,0.00014416783,0.000023520164,0.00006950659,0.000016235288,0.0002184396,0.000057251316,0.00054943096],"category_scores_gemma":[0.00015078593,0.00008559003,0.00008311549,0.00017583174,0.00005781777,0.00013707715,0.000085233005,0.000060300965,0.00005986014],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020318947,0.00003132909,0.000105612504,0.000008106991,0.000016031046,2.813915e-7,0.000089354,0.0026314848,0.9808672,0.000034570014,0.00043147913,0.01576425],"study_design_scores_gemma":[0.00022985863,0.00002388007,0.0017275073,0.000009011654,0.000018638639,0.0000017004361,0.000032230568,0.0010731483,0.9892839,0.000026180945,0.007449133,0.0001247682],"about_ca_topic_score_codex":0.00042067622,"about_ca_topic_score_gemma":0.000051862688,"teacher_disagreement_score":0.10687728,"about_ca_system_score_codex":0.0000983785,"about_ca_system_score_gemma":0.000006760325,"threshold_uncertainty_score":0.60158837},"labels":[],"label_agreement":null},{"id":"W7099291886","doi":"","title":"BIOGRAPHIES","year":2014,"lang":"en","type":"article","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Geomatics; Global Positioning System; Assisted GPS; Inertial measurement unit; Software; Inertial navigation system; Precision Lightweight GPS Receiver","score_opus":0.002510225685766835,"score_gpt":0.1607532659322424,"score_spread":0.15824304024647556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7099291886","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.69806796,9.894858e-7,0.00029089014,0.00046130814,0.000065375374,0.000024934097,5.032948e-7,0.000043084106,0.30104494],"genre_scores_gemma":[0.99643797,0.000004369045,0.0008786991,0.00087814033,0.000010637788,1.7951098e-7,8.940865e-7,0.0000012606337,0.0017878608],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997816,0.0000075367284,0.000036619087,0.000062396626,0.00005217252,0.000059636684],"domain_scores_gemma":[0.99990374,0.0000051241673,0.000008347243,0.000054709566,7.2725237e-7,0.0000273825],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000058131995,0.000025182097,0.000021322883,0.000009422206,0.00002086034,0.0000065523072,0.000047726564,0.000013444204,0.012932099],"category_scores_gemma":[0.0000074523246,0.000017502383,0.000013838967,0.000104233186,0.00004567161,0.000029499166,0.00002480741,0.0000113947,0.0042520543],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000022787892,0.000024354093,0.34756488,6.931783e-7,0.0000016092305,1.3866887e-7,0.000042001677,0.0000035224139,0.49502638,0.0009809816,0.13122718,0.025125988],"study_design_scores_gemma":[0.000120165176,0.000023864075,0.2976945,6.06115e-7,0.0000013782296,7.2565314e-7,0.000010756189,0.00014253223,0.06260153,0.00041436966,0.63889176,0.000097793236],"about_ca_topic_score_codex":0.000046761448,"about_ca_topic_score_gemma":0.000088858156,"teacher_disagreement_score":0.50766456,"about_ca_system_score_codex":0.00000360554,"about_ca_system_score_gemma":2.4947312e-7,"threshold_uncertainty_score":0.99652326},"labels":[],"label_agreement":null},{"id":"W7104439384","doi":"10.71781/20702","title":"Structural and functional diversity of bacterial communities in petroleum hydrocarbons contaminated soils subjected to phytoremediation","year":2022,"lang":"en","type":"dissertation","venue":"Papyrus : Institutional Repository (Université de Montréal)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Phytoremediation; Functional diversity; Petroleum; Soil contamination","score_opus":0.005801978295153188,"score_gpt":0.16141830022767237,"score_spread":0.15561632193251917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7104439384","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947509,0.00022082568,0.0000025842296,0.000038540053,0.0007415124,0.00025276598,0.00017082889,0.000027717135,0.0037942901],"genre_scores_gemma":[0.9942472,0.00006482388,0.000037775848,0.000039489307,0.000031427608,0.0000048830393,0.0021566912,0.000010101558,0.0034076376],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99855196,0.00014438562,0.00028102563,0.00028464533,0.0005191146,0.00021884438],"domain_scores_gemma":[0.9993507,0.00005679692,0.0002645811,0.00016099375,0.000029550038,0.00013733366],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014973107,0.00022295283,0.00026495606,0.00021913144,0.0019615158,0.00001674387,0.00021678327,0.0001808697,0.0011880293],"category_scores_gemma":[0.000026898422,0.0002591366,0.000078646604,0.0002694932,0.00015294587,0.00019617232,0.0004412093,0.0002631475,0.000011335558],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003792408,0.00018836293,0.44306153,0.00007827373,0.00014575559,0.00015953745,0.07518791,0.0018066213,0.47266406,0.00029869098,0.0011628496,0.0014540283],"study_design_scores_gemma":[0.0011984652,0.00011415298,0.96402717,0.000036935246,0.000068872774,0.00003150925,0.019935908,0.0004959217,0.0113892695,0.000033611792,0.0023272296,0.0003409421],"about_ca_topic_score_codex":0.054597333,"about_ca_topic_score_gemma":0.11575181,"teacher_disagreement_score":0.52096564,"about_ca_system_score_codex":0.0029802385,"about_ca_system_score_gemma":0.00019032921,"threshold_uncertainty_score":0.9999861},"labels":[],"label_agreement":null},{"id":"W7104469130","doi":"10.71781/20544","title":"Phytoremédiation d’un sol contaminé par des contaminants organiques et inorganiques","year":2021,"lang":"fr","type":"dissertation","venue":"Papyrus : Institutional Repository (Université de Montréal)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pollution prevention; Panache; Production system (computer science); Petroleum","score_opus":0.005169883800183243,"score_gpt":0.17402164577412196,"score_spread":0.16885176197393872,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7104469130","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97474277,0.008874066,0.00027571977,0.0003075944,0.0013480188,0.00055926014,0.0002655051,0.00013780294,0.013489285],"genre_scores_gemma":[0.96869975,0.0046025957,0.0016152196,0.00047858118,0.00015014432,0.000008861643,0.0013941856,0.000053641135,0.022997046],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996471,0.0004871029,0.0006526332,0.00094689336,0.0007984335,0.00064395997],"domain_scores_gemma":[0.99803627,0.00011695156,0.00069579895,0.00040456303,0.0002954524,0.00045095236],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00035265856,0.000662926,0.0005824503,0.0001535251,0.0056008757,0.0001571101,0.0004926507,0.0007664435,0.0019214463],"category_scores_gemma":[0.00014612958,0.0007608607,0.00029973834,0.00040599017,0.00064159953,0.0008177402,0.0002894808,0.0005174641,0.00056077243],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026419532,0.00039183084,0.17728065,0.00013911747,0.00027164456,0.0010854289,0.054476984,0.00006911704,0.7583775,0.00085875,0.0012727106,0.005512109],"study_design_scores_gemma":[0.00072479574,0.00011282843,0.47163478,0.00027939575,0.00021839427,0.0002838823,0.01307041,0.00014381383,0.50001353,0.000092832845,0.012800638,0.00062469864],"about_ca_topic_score_codex":0.05764035,"about_ca_topic_score_gemma":0.075088404,"teacher_disagreement_score":0.29435414,"about_ca_system_score_codex":0.008080352,"about_ca_system_score_gemma":0.0013109003,"threshold_uncertainty_score":0.99948424},"labels":[],"label_agreement":null},{"id":"W7112526410","doi":"","title":"Bacterial Coculture as a Sustainable Tool for Benzene-Toluene-Ethylbenzene and Xylene (BTEX) Biodegradation","year":2024,"lang":"","type":"article","venue":"Lirias (KU Leuven)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biodegradation; Bacteria; Xylene; Degradation (telecommunications); Cometabolism","score_opus":0.008924168760822287,"score_gpt":0.23968011805349804,"score_spread":0.23075594929267576,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7112526410","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.982916,0.0021543454,0.00025380822,0.006848074,0.0033107758,0.002082021,0.0009548761,0.00017047825,0.0013096445],"genre_scores_gemma":[0.96794736,0.0013170225,0.00097265386,0.00090446515,0.0010946034,0.000053869568,0.00036851445,0.00007980183,0.02726171],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.996054,0.0001419012,0.0008199655,0.0013402126,0.00055685855,0.001087052],"domain_scores_gemma":[0.9987027,0.0001784417,0.00022270044,0.00045329536,0.000088248955,0.00035458728],"candidate_categories":["metaepi_narrow","scholarly_communication","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0008568373,0.0006486546,0.0005268056,0.00015583175,0.0005667051,0.001152711,0.0003973994,0.0006691043,0.009152377],"category_scores_gemma":[0.00026095574,0.00058521674,0.00026099564,0.0006789922,0.00028945325,0.001265788,0.00036608102,0.0003552932,0.0013448887],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000733639,0.00026356644,0.00046208984,0.00086362974,0.00018563126,0.0000834528,0.0026217317,0.000049944967,0.8950078,0.0049142377,0.035176024,0.05963829],"study_design_scores_gemma":[0.0022379223,0.00078881945,0.0035807795,0.00026295468,0.00027290036,0.0000530966,0.0010049363,0.0018822463,0.19601598,0.0016674857,0.79105854,0.0011743372],"about_ca_topic_score_codex":0.0004350884,"about_ca_topic_score_gemma":0.0002234367,"teacher_disagreement_score":0.7558825,"about_ca_system_score_codex":0.0006100544,"about_ca_system_score_gemma":0.00023430053,"threshold_uncertainty_score":0.9998842},"labels":[],"label_agreement":null},{"id":"W7113905581","doi":"10.64898/2025.12.09.693246","title":"From Northwest Passage shores to molecular pathways: Comparative transcriptomic responses of a novel Arctic marine fuel-degrading <i>Flavobacterium</i> species","year":2025,"lang":"","type":"article","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University","funders":"","keywords":"Arctic; Ecosystem; Extreme environment; Transcriptome; Marine ecosystem; Biodegradation; Degradation (telecommunications); Alkane","score_opus":0.019198149426485372,"score_gpt":0.21694325464769004,"score_spread":0.19774510522120467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7113905581","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915024,0.00037275776,0.00096987723,0.0007548592,0.0010013245,0.0011568628,0.0040680347,0.00010647244,0.00006737902],"genre_scores_gemma":[0.9939493,0.00027972733,0.004580061,0.00094852096,0.00011191396,0.000032909702,0.0000020182154,0.0000603488,0.000035185392],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9954952,0.00029287738,0.0012600563,0.0013874158,0.00067027385,0.0008941825],"domain_scores_gemma":[0.9974939,0.00021114414,0.00047606483,0.0010964425,0.00022164875,0.0005007683],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006092479,0.0008306389,0.0010397054,0.00037918962,0.00023082136,0.00025538148,0.0009645273,0.00033806558,0.0013332503],"category_scores_gemma":[0.00020547102,0.0008750664,0.0002880166,0.0020749336,0.0006267772,0.00038257215,0.00045712668,0.00043615286,0.00018470582],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005277201,0.00066738855,0.0652465,0.00015391748,0.00021934605,0.00004270687,0.0002811347,0.000034902092,0.9323737,0.0002478243,0.00019912077,0.0000057569086],"study_design_scores_gemma":[0.00091588753,0.000113509435,0.4356219,0.0003178084,0.00012507678,1.3377762e-8,0.0000550948,0.000085006985,0.5596078,0.0000012287924,0.00265,0.0005067171],"about_ca_topic_score_codex":0.001273626,"about_ca_topic_score_gemma":0.0005169385,"teacher_disagreement_score":0.3727659,"about_ca_system_score_codex":0.00071043125,"about_ca_system_score_gemma":0.00032180428,"threshold_uncertainty_score":0.99957967},"labels":[],"label_agreement":null},{"id":"W7114988631","doi":"10.1016/j.gsd.2025.101565","title":"Source differentiation of co-mingled petroleum derivatives in groundwater at a historically oil-contaminated urban aquifer in South Korea","year":2025,"lang":"en","type":"article","venue":"Groundwater for Sustainable Development","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Korea Environmental Industry and Technology Institute; Ministry of Science and ICT, South Korea; Korea Institute of Geoscience and Mineral Resources; Ministry of Environment; Ministry of Education, Ethiopia","keywords":"BTEX; Contamination; Groundwater; Aquifer; Petroleum; Groundwater contamination; Hydrocarbon; Principal component analysis","score_opus":0.0068134389021120255,"score_gpt":0.20436961695269873,"score_spread":0.1975561780505867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7114988631","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99582267,0.00002435848,0.002604712,0.0001573052,0.000099949946,0.00046725848,0.0000023228379,0.00002964355,0.0007917806],"genre_scores_gemma":[0.9434002,0.000004137733,0.00069500576,0.00012254198,0.000012028267,0.000114531606,0.00014708091,0.000017769718,0.055486728],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977909,0.00008664946,0.00071110146,0.0004857677,0.00026554018,0.0006600587],"domain_scores_gemma":[0.99947405,0.00004607384,0.00017699944,0.0001846088,0.000051835807,0.00006643306],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004937933,0.00026481537,0.00035533693,0.00033782588,0.00014644761,0.000049685023,0.00025479717,0.00014537651,0.00041135898],"category_scores_gemma":[0.000058234433,0.00023083994,0.000063680964,0.00044781965,0.00010184511,0.0002481787,0.00026852245,0.000105193525,0.000031197567],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006921972,0.0007683492,0.9025098,0.00042065603,0.000054568332,0.000020445912,0.029832328,0.00009528829,0.059954897,0.00013853572,0.0026386091,0.0028742964],"study_design_scores_gemma":[0.0044027087,0.0001593192,0.7465704,0.0000870613,0.000022098739,0.0000014031914,0.004237327,0.00037377008,0.10214542,0.00012418248,0.14122516,0.00065112987],"about_ca_topic_score_codex":0.00038343953,"about_ca_topic_score_gemma":0.0007576733,"teacher_disagreement_score":0.1559394,"about_ca_system_score_codex":0.0036726505,"about_ca_system_score_gemma":0.00008347752,"threshold_uncertainty_score":0.9603853},"labels":[],"label_agreement":null},{"id":"W7131863500","doi":"10.1002/(sici)1097-0290(20000220)67:4<417::aid-bit5>3.0.co;2-%23","title":"Effects of bioaugmentation strategies in UASB reactors with a methanogenic consortium for removal of phenolic compounds","year":2000,"lang":"en","type":"article","venue":"NPARC","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Bioaugmentation; Calcium alginate; Adsorption; Phenol; Bioreactor; Microbial consortium","score_opus":0.007129925962999947,"score_gpt":0.2251818245529575,"score_spread":0.21805189858995755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7131863500","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9925572,0.000011263698,0.00004144143,0.000039671653,0.00002114972,0.00032640246,0.0000132891655,0.0000073541264,0.0069821803],"genre_scores_gemma":[0.9966184,0.000024784904,0.0031773672,0.00003527882,0.000005332742,0.0000056079402,0.000010449245,0.0000052889213,0.000117487674],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993908,0.000035164783,0.00019121691,0.00012953795,0.00013582974,0.00011745543],"domain_scores_gemma":[0.99973226,0.00006225535,0.000094428906,0.000076987184,0.0000070154424,0.000027059117],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010791779,0.00007295907,0.00013577015,0.000031561696,0.000013389502,0.0000055191667,0.000077618395,0.000050518298,0.00089334935],"category_scores_gemma":[0.00000885974,0.000057781905,0.000028634997,0.00018128876,0.00014625634,0.00009734745,0.00000936397,0.00003849108,0.000012298937],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015727869,0.00008821731,0.0039981836,0.00003584604,0.0000084112335,0.0000016517114,0.00042918843,0.000025391046,0.99095607,0.000045724137,0.000096727286,0.0041573117],"study_design_scores_gemma":[0.0011975884,0.00021758884,0.045655232,0.000026438684,0.000017704728,0.0000043464875,0.00013871987,0.000087658285,0.9515789,0.00036775554,0.0006178398,0.00009020739],"about_ca_topic_score_codex":0.00011017078,"about_ca_topic_score_gemma":0.00017102019,"teacher_disagreement_score":0.041657045,"about_ca_system_score_codex":0.00003953856,"about_ca_system_score_gemma":0.000018754052,"threshold_uncertainty_score":0.9781549},"labels":[],"label_agreement":null},{"id":"W7131958401","doi":"","title":"Biodegradation potential assessment of sediments from Lac Mégantic (Québec, Canada) contaminated with light residual oil","year":2019,"lang":"en","type":"article","venue":"NPARC","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Biodegradation; Petroleum; Contamination; Residual oil; Sediment; Degradation (telecommunications); Total organic carbon; Hydrocarbon; Petroleum product","score_opus":0.0032627371026629813,"score_gpt":0.18292458887616994,"score_spread":0.17966185177350696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7131958401","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9883922,0.000003690028,0.000020668462,0.0017359034,0.00016131123,0.000095983676,0.00006899005,0.000012510717,0.009508753],"genre_scores_gemma":[0.9971858,0.000006126063,0.0007706444,0.0002241783,0.000015259979,0.0000012148053,0.000083012455,0.0000075406615,0.001706203],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988918,0.000041907333,0.00018576314,0.00022207735,0.0005008095,0.00015765631],"domain_scores_gemma":[0.99959815,0.000016902579,0.00013326282,0.00016840537,0.000016847172,0.000066438515],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000082286206,0.00010416155,0.00013636319,0.000017358594,0.00003829848,0.000012632654,0.0001381906,0.00004706884,0.008682208],"category_scores_gemma":[0.0000053316353,0.00008016492,0.000016407212,0.000110188164,0.000042749987,0.000088399036,0.000053620526,0.00006975555,0.00009962252],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028497712,0.00004634909,0.13892102,0.0000046393307,0.000018357185,0.0000042163524,0.000035050365,0.00001992106,0.8529262,0.0000057535162,0.0069792145,0.0010108092],"study_design_scores_gemma":[0.0013533012,0.00012616989,0.6007939,0.000031850406,0.000036658457,0.0000015689595,0.000090427784,0.0009073886,0.38776731,0.000009735109,0.008656908,0.00022476472],"about_ca_topic_score_codex":0.30818263,"about_ca_topic_score_gemma":0.51219255,"teacher_disagreement_score":0.46515888,"about_ca_system_score_codex":0.00024061129,"about_ca_system_score_gemma":0.00020468449,"threshold_uncertainty_score":0.992224},"labels":[],"label_agreement":null},{"id":"W7132489993","doi":"","title":"Feeding bacteria inhabiting oil reservoirs may enhance oil production","year":2016,"lang":"en","type":"article","venue":"NPARC","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Bacteria; Oil production; Microbial enhanced oil recovery; Oil field; Microorganism; Flood myth; Bacillales; Produced water","score_opus":0.011775106566302495,"score_gpt":0.2267948137004836,"score_spread":0.21501970713418112,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7132489993","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9419126,0.0000022106397,0.000008863509,0.0058691427,0.0004539392,0.000022503691,0.0000059186955,0.000057641166,0.05166717],"genre_scores_gemma":[0.9744199,0.00007615418,0.0016132162,0.00014124798,0.0001953257,0.000003929744,0.000002476135,0.000010034533,0.023537735],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989963,0.000039764793,0.0001779898,0.00031741086,0.00021334144,0.00025515916],"domain_scores_gemma":[0.99962604,0.000021296566,0.00008936939,0.00017523007,0.000011371026,0.00007667051],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00032388885,0.000098839984,0.000082659004,0.000020875581,0.0001084429,0.000026191545,0.00015261449,0.00005597844,0.009838481],"category_scores_gemma":[0.00020337041,0.0000676709,0.000028415376,0.00015306482,0.000107392014,0.0002886002,0.00011482088,0.00005755496,0.0020629799],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011660728,0.000013929773,0.005240717,0.000005648736,0.0000015698604,7.972429e-7,0.000092532486,3.791706e-7,0.8669641,0.000007378309,0.0070383465,0.12062291],"study_design_scores_gemma":[0.00014081242,0.00001702605,0.0134322895,0.00006038042,0.0000027337258,0.0000042411275,0.00002940267,0.0000038463495,0.94949144,0.000076196455,0.036589827,0.00015180642],"about_ca_topic_score_codex":0.000017587083,"about_ca_topic_score_gemma":0.000060569422,"teacher_disagreement_score":0.120471105,"about_ca_system_score_codex":0.0001444827,"about_ca_system_score_gemma":0.000007757236,"threshold_uncertainty_score":0.998714},"labels":[],"label_agreement":null},{"id":"W7132882085","doi":"","title":"Enhanced dissolution of a tetrachloroethylene DNAPL in a two dimensional model aquifer","year":2003,"lang":"","type":"dissertation","venue":"TSpace","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Environmental Security Technology Certification Program; Government of Ontario; University of Toronto; McMaster University","keywords":"Bioaugmentation; Biostimulation; Aquifer; Tetrachloroethylene; Groundwater; Bioremediation; Dissolution; Biodegradation","score_opus":0.014973500027370235,"score_gpt":0.30719195517791087,"score_spread":0.2922184551505406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7132882085","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99222016,0.0002256923,0.0008541426,0.0001167426,0.00069871097,0.00073619996,0.00006379588,0.000017242715,0.0050672875],"genre_scores_gemma":[0.97401655,0.00023636803,0.0011684083,0.00013562416,0.00002439681,0.000015675592,0.00033046442,0.00004223115,0.024030305],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963874,0.00018101663,0.00096651935,0.00090835436,0.0008935376,0.0006631344],"domain_scores_gemma":[0.9985122,0.000067359484,0.0007101725,0.00042598796,0.000064034226,0.00022021965],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000532206,0.0005689962,0.00065912394,0.00020893734,0.00011777418,0.000025937255,0.00033652585,0.00041323112,0.00552179],"category_scores_gemma":[0.00014294514,0.0005733836,0.0002131867,0.0007328611,0.00024020823,0.00022267124,0.000082374674,0.00051097304,0.00047114733],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003518463,0.0005365368,0.00065604306,0.0000744139,0.000019617413,0.0000032514918,0.006334012,0.02627553,0.9637567,0.00005282234,0.00018163923,0.0017576127],"study_design_scores_gemma":[0.0020248408,0.00012812148,0.012670149,0.00033795318,0.00006907297,0.0000026366856,0.001873838,0.043234017,0.93868816,0.000080655,0.000070447335,0.0008200839],"about_ca_topic_score_codex":0.0010375292,"about_ca_topic_score_gemma":0.0034291712,"teacher_disagreement_score":0.02506849,"about_ca_system_score_codex":0.0005254278,"about_ca_system_score_gemma":0.00019204777,"threshold_uncertainty_score":0.99967176},"labels":[],"label_agreement":null},{"id":"W7132886655","doi":"","title":"Investigation of stable carbon compound specific isotope analysis to monitor and quantify the biodegradation of chlorinated ethenes in groundwater systems","year":2004,"lang":"","type":"dissertation","venue":"TSpace","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biodegradation; Isotope analysis; Fractionation; Isotopes of carbon; Isotope fractionation; Vinyl chloride; Isotope; Carbon fibers","score_opus":0.030407210526092826,"score_gpt":0.27502020280301925,"score_spread":0.24461299227692643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7132886655","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99735874,0.00058009214,0.000039136296,0.00027318488,0.0004453032,0.001129946,0.000042628184,0.000009267322,0.00012171225],"genre_scores_gemma":[0.9981263,0.00069856405,0.00011493631,0.0000117301615,0.000026671883,0.000013802081,0.0003459982,0.000018975094,0.00064300845],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9973441,0.00026501375,0.0009381249,0.00055789563,0.0006037619,0.000291155],"domain_scores_gemma":[0.99846053,0.00009094624,0.00084253924,0.00038662564,0.000106648964,0.000112696114],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007766638,0.00035070482,0.00066314597,0.00047079785,0.00010029906,0.00009497943,0.00029367453,0.00029663462,0.00013973018],"category_scores_gemma":[0.000029770856,0.00027284594,0.000095440904,0.0023592024,0.00026511247,0.00015333394,0.00006624333,0.00020525172,0.000015569627],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018240228,0.000072177325,0.11406013,0.00021239155,0.00014263562,0.0000010978858,0.018040467,0.0033180139,0.8637026,0.00004730381,0.000010626139,0.00021014221],"study_design_scores_gemma":[0.00045542786,0.00015120517,0.5380002,0.00026028627,0.0002671493,7.7331003e-7,0.012043285,0.0019401142,0.4464477,0.000017452581,0.00009307409,0.00032331469],"about_ca_topic_score_codex":0.051885087,"about_ca_topic_score_gemma":0.007306717,"teacher_disagreement_score":0.42394006,"about_ca_system_score_codex":0.00033242154,"about_ca_system_score_gemma":0.00004824401,"threshold_uncertainty_score":0.99997234},"labels":[],"label_agreement":null},{"id":"W7133026548","doi":"","title":"Investigating mechanisms of chlorinated ethane biotransformation using compound specific carbon isotope analysis","year":2007,"lang":"","type":"dissertation","venue":"TSpace","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biotransformation; Biodegradation; Fractionation; Cometabolism; Reductive dechlorination; Hydrolysis; Microbial biodegradation; Isotope fractionation; Isotope analysis","score_opus":0.03404156483867441,"score_gpt":0.32476638737174535,"score_spread":0.2907248225330709,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7133026548","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98915666,0.00013396257,0.0046213437,0.00005803412,0.0007357527,0.00083194755,0.00005813702,0.000042927248,0.0043612034],"genre_scores_gemma":[0.99290574,0.0003111444,0.0048074494,0.000055874974,0.000053575168,0.0000020070968,0.0010493125,0.000043497228,0.0007714098],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9958195,0.00018455215,0.0014103705,0.00076860434,0.0011671775,0.0006498059],"domain_scores_gemma":[0.9974017,0.00008024833,0.001611905,0.0004656476,0.00014083051,0.00029967347],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011921207,0.0006376617,0.0009389905,0.0007669027,0.00021668045,0.000090751826,0.0004435645,0.0007610505,0.003234695],"category_scores_gemma":[0.000048937083,0.00067568553,0.00036865563,0.004058289,0.00028710262,0.0002435333,0.00006578444,0.000526779,0.000087261484],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008127233,0.00010941527,0.0019054832,0.00016520325,0.00027922017,0.0000040719187,0.009056446,0.0021273296,0.9853667,0.000066659755,0.000008245837,0.00082995766],"study_design_scores_gemma":[0.00062229525,0.00011298843,0.014318906,0.00019577726,0.00087502826,0.00000349263,0.007455917,0.027270662,0.94824445,0.00006553393,0.00012028587,0.00071464805],"about_ca_topic_score_codex":0.0057808245,"about_ca_topic_score_gemma":0.0015700208,"teacher_disagreement_score":0.03712223,"about_ca_system_score_codex":0.00057907007,"about_ca_system_score_gemma":0.000089292276,"threshold_uncertainty_score":0.9995694},"labels":[],"label_agreement":null},{"id":"W7133037187","doi":"","title":"Dechlorination rates in KB-1, a commercial trichloroethylene-degrading bacterial culture","year":2007,"lang":"","type":"dissertation","venue":"TSpace","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; University of Toronto","keywords":"Bioaugmentation; Microbiological culture; Bacteria; Biodegradation; Electron donor; Methanol; Reductive dechlorination","score_opus":0.022076791553737426,"score_gpt":0.34513557766871156,"score_spread":0.32305878611497413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7133037187","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9853426,0.00024101092,0.00005484257,0.00031587837,0.0035172906,0.0010673045,0.000053622858,0.00005910304,0.009348345],"genre_scores_gemma":[0.98315847,0.0018101204,0.00069675385,0.00023292053,0.00059020723,0.00001701935,0.0016919208,0.000068515656,0.011734045],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99590576,0.00023775868,0.0010275104,0.0010292436,0.00085925,0.00094048213],"domain_scores_gemma":[0.9983877,0.00012580186,0.00075457426,0.00035293662,0.00007335529,0.0003056429],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0008435744,0.00078211696,0.0007054307,0.00040781216,0.00033152563,0.00022584597,0.0005858099,0.0012259837,0.008132267],"category_scores_gemma":[0.0002749474,0.0007790085,0.00022574476,0.0015014145,0.00017002912,0.00043025406,0.00011509143,0.00091030117,0.0013911717],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010969554,0.0003869539,0.013434755,0.000095846175,0.000028394872,0.000034917233,0.026969895,0.00002259134,0.92286074,0.000040772527,0.0022441847,0.032783978],"study_design_scores_gemma":[0.0035262248,0.00033832647,0.29669368,0.00032048774,0.000105078994,0.000009378931,0.010798568,0.00027155064,0.6443266,0.00004826066,0.041914903,0.0016468983],"about_ca_topic_score_codex":0.0019299808,"about_ca_topic_score_gemma":0.010160655,"teacher_disagreement_score":0.28325894,"about_ca_system_score_codex":0.001150445,"about_ca_system_score_gemma":0.00011638686,"threshold_uncertainty_score":0.99946606},"labels":[],"label_agreement":null},{"id":"W7133069597","doi":"","title":"Characterization of anaerobic benzene-degrading cultures","year":2004,"lang":"","type":"dissertation","venue":"TSpace","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; University of Toronto","keywords":"Eubacterium; Achromobacter; Anaerobic exercise; Pseudomonas; Bacteria; Enrichment culture","score_opus":0.01110453751546822,"score_gpt":0.2802485294757875,"score_spread":0.2691439919603193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7133069597","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952843,0.00009691534,0.00007044838,0.00020562121,0.0009914115,0.00060417614,0.00007982543,0.000038279602,0.0026290077],"genre_scores_gemma":[0.9867294,0.0011648416,0.00039647074,0.00011048243,0.00010366523,0.0000049218547,0.0019185458,0.000045066532,0.009526635],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975311,0.00008368882,0.000695003,0.0006523136,0.0006045773,0.00043332673],"domain_scores_gemma":[0.99835324,0.000016826187,0.0010456562,0.00033711133,0.000061596,0.00018553979],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002033262,0.0004939191,0.0005114633,0.00013200653,0.00020073653,0.00006947094,0.00042004525,0.00054717204,0.009000276],"category_scores_gemma":[0.000050936727,0.00047245942,0.00020734532,0.0006296746,0.00015444434,0.00024735276,0.00006571129,0.00029697895,0.00076399295],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000066216846,0.00014395521,0.0010376757,0.00014460077,0.000033287146,0.0000026066298,0.011601316,0.00005443479,0.98458284,0.000069245136,0.00009626479,0.0021675553],"study_design_scores_gemma":[0.00047450006,0.000112928734,0.09799884,0.000319751,0.00008650136,0.0000023525934,0.0020763837,0.00003986951,0.8966387,0.000017641756,0.0017402158,0.00049232587],"about_ca_topic_score_codex":0.0007704215,"about_ca_topic_score_gemma":0.00063603866,"teacher_disagreement_score":0.09696116,"about_ca_system_score_codex":0.00038481463,"about_ca_system_score_gemma":0.00010892736,"threshold_uncertainty_score":0.9997727},"labels":[],"label_agreement":null},{"id":"W7143899916","doi":"10.71465/ajbt160","title":"Biotechnology in Environmental Monitoring and Pollution Control","year":2020,"lang":"","type":"article","venue":"American Journal of Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Environmental pollution; Environmental monitoring; Pollution; Sustainability; Monitoring and control; Pollution prevention","score_opus":0.005650601013635592,"score_gpt":0.19774973858064734,"score_spread":0.19209913756701175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7143899916","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92478687,0.0010241068,0.0004979582,0.07317388,0.00025856757,0.00017490175,0.00004764319,0.000023208175,0.000012856596],"genre_scores_gemma":[0.98776215,0.01018962,0.0010559505,0.00086299435,0.000106319465,5.475424e-7,4.4531993e-7,0.000018402827,0.0000035836133],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977281,0.00013278914,0.0009162437,0.00043640708,0.00027087537,0.0005155974],"domain_scores_gemma":[0.99847,0.000031319818,0.0010536102,0.00018205216,0.0000055411424,0.0002574929],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.00032453306,0.00029599768,0.0007085802,0.00032498458,0.00007294241,0.000022605629,0.0004995598,0.0004936471,0.0003290922],"category_scores_gemma":[0.0001206454,0.00028353263,0.00010243933,0.00078969623,0.0028115944,0.00018736237,0.00024760727,0.0009633903,0.000110152796],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020547291,0.00008253631,0.0353526,0.000004043451,0.00003510891,0.00007451691,0.00029211378,0.000034437126,0.7375064,0.000023658673,0.000027277367,0.22636183],"study_design_scores_gemma":[0.003866836,0.006539813,0.16597214,0.00008030622,0.000099236975,0.00057516305,0.0064076446,0.00058459217,0.80522203,0.000048777816,0.009992959,0.0006105187],"about_ca_topic_score_codex":0.00006025776,"about_ca_topic_score_gemma":0.000007740661,"teacher_disagreement_score":0.22575131,"about_ca_system_score_codex":0.00031248873,"about_ca_system_score_gemma":0.00003716565,"threshold_uncertainty_score":0.9999617},"labels":[],"label_agreement":null},{"id":"W7155059233","doi":"10.12731/2658-6649-2025-17-6-1-1337","title":"Isolation and identification of oil-degrading bacteria from oil-contaminated muddy soil samples at automotive service stations in Vietnam","year":2025,"lang":"ru","type":"article","venue":"Siberian Journal of Life Sciences and Agriculture","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"GLS Industries (Canada)","funders":"","keywords":"Bioremediation; Achromobacter; Contamination; Isolation (microbiology); Soil contamination; Stenotrophomonas; Pollution; Soil test","score_opus":0.009726879376380781,"score_gpt":0.2226417546624989,"score_spread":0.2129148752861181,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7155059233","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99400246,0.0008482601,0.000032955086,0.0041651176,0.00043415764,0.00006621295,0.00026389406,0.0000034082293,0.00018350848],"genre_scores_gemma":[0.9965607,0.0018440082,0.00082917407,0.0002572393,0.000055010478,6.0101706e-7,0.000029344576,0.0000028683558,0.00042107757],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998168,0.00017638892,0.000853671,0.0003081189,0.00029478062,0.00019907508],"domain_scores_gemma":[0.99858147,0.000118444405,0.0009504661,0.00007093333,0.00013961022,0.00013908415],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006930192,0.00017759322,0.00031534125,0.00012897169,0.00028674488,0.00015149245,0.00022674547,0.00013474988,0.000328232],"category_scores_gemma":[0.000150526,0.00012030309,0.00004953621,0.0009843005,0.00029188587,0.0006762767,0.00010337364,0.00015232513,0.000008878021],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044305485,0.000066445544,0.054591578,0.00005374332,0.000025132704,0.0000011357137,0.0039566937,0.00014975754,0.9371112,0.000015508724,0.0005295924,0.0034549122],"study_design_scores_gemma":[0.0008161057,0.0000986129,0.9512453,0.00052035967,0.00006389172,0.000007665281,0.008995598,0.0009417388,0.036561724,0.00006855795,0.0004884777,0.00019194103],"about_ca_topic_score_codex":0.00042165734,"about_ca_topic_score_gemma":0.0029215137,"teacher_disagreement_score":0.9005495,"about_ca_system_score_codex":0.00011140237,"about_ca_system_score_gemma":0.00008376721,"threshold_uncertainty_score":0.49058175},"labels":[],"label_agreement":null},{"id":"W7161768345","doi":"10.82308/41785","title":"The influence of cold climate seasonal temperature regimes on bioremediation of petroleum hydrocarbon-contaminated soils","year":2010,"lang":"en","type":"dissertation","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Petroleum; Climate change; Atmospheric emissions; Decantation","score_opus":0.002951968574756078,"score_gpt":0.20559643891636967,"score_spread":0.2026444703416136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7161768345","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99163103,0.000030312876,7.1733744e-8,0.00010705149,0.00038734038,0.00031895022,0.00010302788,0.000024539799,0.0073976605],"genre_scores_gemma":[0.9936704,0.0003540378,0.000034167806,0.00009484055,0.00003343011,0.000008848049,0.0003843117,0.000019855603,0.005400113],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99813056,0.000065886044,0.0005274554,0.000340062,0.0006581205,0.00027791254],"domain_scores_gemma":[0.99865305,0.00012579406,0.00072814414,0.000344094,0.00006929494,0.000079643585],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038842927,0.00027076912,0.00029906482,0.000060269856,0.0001315946,0.000030130612,0.00040762115,0.00049833464,0.0003120488],"category_scores_gemma":[0.00012763035,0.00017694801,0.00011620812,0.00025596266,0.00019388404,0.000103530256,0.00004268669,0.0004216005,0.00009949362],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015612578,0.00006729726,0.0056904424,0.000044352608,0.00001868464,7.6176156e-7,0.00016495076,0.00009383068,0.9920403,0.00022948538,0.0011234867,0.00037029057],"study_design_scores_gemma":[0.00032749184,0.00013240293,0.22435904,0.00009678205,0.000033304113,5.279361e-7,0.0001683628,0.00012295564,0.7730968,0.000013836663,0.0014267274,0.00022175166],"about_ca_topic_score_codex":0.00015308228,"about_ca_topic_score_gemma":0.0017777177,"teacher_disagreement_score":0.21894348,"about_ca_system_score_codex":0.00006605582,"about_ca_system_score_gemma":0.00006067845,"threshold_uncertainty_score":0.72157305},"labels":[],"label_agreement":null},{"id":"W7161780606","doi":"10.82308/1422","title":"Developing and assessing efficient hydrocarbon bioremediation strategies for cold-temperature soils and sediments: Two case studies in northern Canada.","year":2023,"lang":"en","type":"dissertation","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Bioremediation; Biostimulation; Microcosm; Nutrient; Soil contamination; Soil water; Diesel fuel; Petroleum","score_opus":0.023396055654335148,"score_gpt":0.3007588701874072,"score_spread":0.27736281453307204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7161780606","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998363,0.00020762991,0.0000039912206,0.000102871374,0.000578812,0.0005741147,0.000030748168,0.000029163455,0.00010964331],"genre_scores_gemma":[0.99870956,0.00014647728,0.0002712975,0.000119401346,0.00003837683,0.000029376868,0.00026766342,0.000023492099,0.00039436627],"study_design_codex":"bench_or_experimental","study_design_gemma":"qualitative","domain_scores_codex":[0.9986723,0.000036778718,0.0003497439,0.0004351255,0.00024886488,0.00025716692],"domain_scores_gemma":[0.9995395,0.000110470326,0.00017189584,0.00007663499,0.0000364619,0.000065070555],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027020712,0.0002544889,0.00026511532,0.000081692226,0.00018797374,0.00012881681,0.000056753437,0.00014604296,0.000007831841],"category_scores_gemma":[0.000063462765,0.00021684663,0.000017764061,0.00026095228,0.000056042496,0.0001269103,0.00004335252,0.00012494733,0.0000023882337],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018483575,0.00017314675,0.084488645,0.0025587208,0.00041084763,0.0013207705,0.027087629,0.0044389213,0.8656419,0.00037971587,0.0043456727,0.008969183],"study_design_scores_gemma":[0.011125338,0.0003555502,0.18406989,0.002974765,0.00061005494,0.0003158031,0.52984816,0.01794458,0.243802,0.0008582127,0.0014428885,0.0066528027],"about_ca_topic_score_codex":0.08261965,"about_ca_topic_score_gemma":0.9793639,"teacher_disagreement_score":0.89674425,"about_ca_system_score_codex":0.0005527034,"about_ca_system_score_gemma":0.00033261714,"threshold_uncertainty_score":0.9234893},"labels":[],"label_agreement":null},{"id":"W7161784017","doi":"10.82308/28651","title":"Polyphasic examination of microbial communities in soils contaminated with organic pollutants","year":2001,"lang":"en","type":"dissertation","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Contamination; Microbial population biology; Temperature gradient gel electrophoresis; Mineralization (soil science); Soil water; Soil contamination; Loam; Sphingomonas","score_opus":0.0076820108913454015,"score_gpt":0.2084242785836665,"score_spread":0.2007422676923211,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7161784017","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96522874,0.000020010719,0.0000059994386,0.000017581258,0.00013625299,0.0003467689,0.0000641587,0.000027520806,0.034152962],"genre_scores_gemma":[0.98123735,0.000125867,0.00009430718,0.000071133014,0.000010698289,0.00000299131,0.00080981466,0.00002747535,0.017620374],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986672,0.0001267983,0.00044006977,0.00021701014,0.00029117454,0.00025775147],"domain_scores_gemma":[0.9993363,0.0000383925,0.000320483,0.00022412176,0.00002962808,0.000051099792],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00024165012,0.00025644206,0.00033181952,0.00016431585,0.0000523471,0.000022112663,0.0002808856,0.00027172305,0.01727492],"category_scores_gemma":[0.000015468337,0.00021365545,0.000037352984,0.00055190333,0.00012552956,0.00014874316,0.00003471492,0.00021875178,0.00015973824],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022870692,0.00033123037,0.008779545,0.00006528564,0.000028745282,0.000013687739,0.007174062,0.000007232424,0.95516354,0.000015674925,0.0003232514,0.027869016],"study_design_scores_gemma":[0.0020187735,0.00027473966,0.6278277,0.0002945855,0.000049771104,0.000015789701,0.012603189,0.00006667378,0.35581228,0.000014132296,0.0003919485,0.00063040666],"about_ca_topic_score_codex":0.002267366,"about_ca_topic_score_gemma":0.11677676,"teacher_disagreement_score":0.6190482,"about_ca_system_score_codex":0.00021496635,"about_ca_system_score_gemma":0.000046880134,"threshold_uncertainty_score":0.98362345},"labels":[],"label_agreement":null},{"id":"W7161796757","doi":"10.82308/44730","title":"Revegetation and reclamation of oil sands process-affected material using «Frankia»-inocculated alders: field and greenhouse trials","year":2009,"lang":"en","type":"dissertation","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Revegetation; Oil sands; Tailings; Land reclamation; Frankia; Biomass (ecology); Microbial population biology; Bioenergy","score_opus":0.019696826547029478,"score_gpt":0.29247620015279263,"score_spread":0.27277937360576315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7161796757","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99799657,0.00004888672,0.000018335713,0.000059488142,0.0002073118,0.0003061325,0.000024329302,0.000040334406,0.0012986385],"genre_scores_gemma":[0.9974383,0.0002788235,0.00082407205,0.00010285635,0.000047993497,0.000002868914,0.00066567207,0.000016300753,0.0006230824],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984737,0.00016015096,0.0006409513,0.00033038808,0.00025240803,0.00014242162],"domain_scores_gemma":[0.9991288,0.000059063565,0.0006006327,0.00010888153,0.00004154775,0.000061039806],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00053360144,0.00022543196,0.00045851793,0.00008817412,0.00006463297,0.000058427533,0.00007000735,0.00039658218,0.0010608548],"category_scores_gemma":[0.00027530262,0.00018754437,0.000049270133,0.00019799561,0.000038229693,0.00023052246,0.000013929116,0.000093766605,0.0000065132044],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003085436,0.000037431866,0.0007430275,0.00024272304,0.000023464307,9.1619495e-7,0.0006372342,0.000013538888,0.9516703,0.0000020959585,0.00032812497,0.04599262],"study_design_scores_gemma":[0.0015243485,0.00023972362,0.06724238,0.00037846397,0.00025070267,0.0000070635906,0.00028882088,0.001074713,0.9281726,0.000250478,0.00006116904,0.00050952734],"about_ca_topic_score_codex":0.0004168661,"about_ca_topic_score_gemma":0.00074782694,"teacher_disagreement_score":0.066499345,"about_ca_system_score_codex":0.000039009195,"about_ca_system_score_gemma":0.000023104802,"threshold_uncertainty_score":0.9998523},"labels":[],"label_agreement":null},{"id":"W7161868621","doi":"10.82308/42757","title":"Molecular characterization of the hydrocarbon biodegradation process on Canadian Arctic beaches","year":2025,"lang":"en","type":"dissertation","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Arctic; Bioremediation; Environmental remediation; Biodegradation; Permafrost; Metagenomics; Climate change; Shore; Microbial population biology","score_opus":0.00559890769404954,"score_gpt":0.20267175000390303,"score_spread":0.1970728423098535,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7161868621","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96852523,0.0000034373584,0.0000025653635,0.0003659041,0.0003425535,0.00038634855,0.000046839043,0.0000118282915,0.030315293],"genre_scores_gemma":[0.9917201,0.000010545498,0.0000065347936,0.00043339533,0.000008885586,0.00000700389,0.0015116459,0.000009071614,0.0062928195],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990951,0.000036038462,0.00021854661,0.00024012498,0.00027097185,0.00013924319],"domain_scores_gemma":[0.9995224,0.0000065545564,0.00019182893,0.00019948492,0.000024249497,0.00005551558],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007177102,0.00015252322,0.000121249286,0.00008155053,0.000070881244,0.000018164998,0.00024176543,0.00018592174,0.0006552704],"category_scores_gemma":[0.000050168932,0.0001088386,0.000058910995,0.00037209972,0.00002539638,0.000050641862,0.000011508652,0.000120597026,0.000050116596],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020940395,0.000048006812,0.006337342,0.000099779805,0.000016032373,4.839608e-7,0.00036121721,0.00003122752,0.98791414,0.00011887509,0.00012703457,0.004924936],"study_design_scores_gemma":[0.00009172711,0.00002034019,0.15002419,0.00013697732,0.000033931963,1.7204063e-7,0.00007023047,0.00017924941,0.848485,0.00007442693,0.00071400695,0.00016972514],"about_ca_topic_score_codex":0.020936256,"about_ca_topic_score_gemma":0.1699642,"teacher_disagreement_score":0.14902794,"about_ca_system_score_codex":0.00023669121,"about_ca_system_score_gemma":0.000144247,"threshold_uncertainty_score":0.9855834},"labels":[],"label_agreement":null},{"id":"W7161871624","doi":"10.82308/16043","title":"Bioremediation of petroleum hydrocarbons: multi-scale investigation of effects of pore size and role of diurnal temperature changes","year":2014,"lang":"en","type":"dissertation","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Bioremediation; Biodegradation; Environmental remediation; Petroleum; Soil water; Moisture; Hydrocarbon; Soil contamination; Biostimulation","score_opus":0.0029162987554451256,"score_gpt":0.18960547104638747,"score_spread":0.18668917229094234,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7161871624","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99881786,0.00023202522,0.0000036610654,0.00003300131,0.00014838227,0.0003119756,0.000035834153,0.000008202953,0.0004090689],"genre_scores_gemma":[0.9981802,0.00025922983,0.00084839336,0.000023942768,0.000024080804,0.0000044405783,0.00029375212,0.000014706704,0.00035126464],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986499,0.000077618286,0.0005049891,0.00024246059,0.00040342627,0.00012163025],"domain_scores_gemma":[0.99860156,0.000112864705,0.0010030693,0.00016516156,0.000043470263,0.00007389302],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021546576,0.00020087771,0.00044612418,0.00010115467,0.000020689287,0.00000449026,0.00014100276,0.00033980212,0.00009307395],"category_scores_gemma":[0.00015280387,0.00016499827,0.00007218907,0.00019836485,0.00018717854,0.00007180791,0.00003234509,0.000119140816,0.0000018156475],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000469742,0.000058136004,0.04003813,0.0005639225,0.000018854555,1.1344864e-7,0.0010130913,0.000004705329,0.9576779,0.000005977778,0.000045331893,0.00052687083],"study_design_scores_gemma":[0.00041392166,0.00014953325,0.28681368,0.00020319334,0.00004842432,3.2948435e-7,0.00024673645,0.0001769149,0.7118047,0.00003193504,0.000009518179,0.00010115825],"about_ca_topic_score_codex":0.00030451,"about_ca_topic_score_gemma":0.0016540292,"teacher_disagreement_score":0.24677554,"about_ca_system_score_codex":0.000025992824,"about_ca_system_score_gemma":0.000026400354,"threshold_uncertainty_score":0.6728434},"labels":[],"label_agreement":null},{"id":"W7161956607","doi":"10.82308/6719","title":"Laboratory study of solvent extraction of polychlorinated biphenyls in soil","year":2000,"lang":"en","type":"dissertation","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Accelerated solvent extraction; Extraction (chemistry); Ethyl acetate; Environmental remediation; Contamination; Soil contamination; Soil test","score_opus":0.007912563281157164,"score_gpt":0.25255957549187624,"score_spread":0.24464701221071908,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7161956607","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98910046,0.000018708213,2.2807929e-7,0.0000045072557,0.0002408929,0.00034542748,0.000021846896,0.000011551145,0.0102563705],"genre_scores_gemma":[0.9965506,0.00007426692,0.000018799778,0.0000106023,0.0000083737095,0.000004475298,0.00009976043,0.000010366536,0.003222732],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99879277,0.000050168364,0.00049547123,0.00023141013,0.00031044733,0.00011975209],"domain_scores_gemma":[0.9994766,0.00001384721,0.00029657024,0.00016115766,0.00001718986,0.00003459546],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015632817,0.00014051184,0.00024713142,0.0001114289,0.000016702985,0.0000043752434,0.00013255668,0.00016167098,0.008804004],"category_scores_gemma":[0.000011414465,0.00012617813,0.000037178175,0.0004299799,0.000026458514,0.000086935404,0.00001291297,0.00012359189,0.000093599374],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037282915,0.0019809431,0.03507443,0.000043630476,0.000018190953,0.000004991456,0.0021817288,0.0001081675,0.9562608,0.0000018247858,0.00062093214,0.0033315034],"study_design_scores_gemma":[0.0007875548,0.00027164904,0.5968602,0.00004437053,0.000023372415,2.4809222e-7,0.0040066484,0.000023449436,0.39727193,0.0000070603564,0.00049870403,0.00020487093],"about_ca_topic_score_codex":0.0024425392,"about_ca_topic_score_gemma":0.018009951,"teacher_disagreement_score":0.5617857,"about_ca_system_score_codex":0.00009258262,"about_ca_system_score_gemma":0.000031605825,"threshold_uncertainty_score":0.9999088},"labels":[],"label_agreement":null},{"id":"W7162012872","doi":"10.82308/35444","title":"Microbial responses to the biostimulation of Subartic hydrocarbon-contaminated soil under seasonal freeze-thaw conditions","year":2010,"lang":"en","type":"dissertation","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Biostimulation; Mesocosm; Biodegradation; Hydrocarbon; Microcosm; Soil contamination; Population; Mineralization (soil science); Soil microbiology; Microbial population biology","score_opus":0.00785429630822019,"score_gpt":0.2443712959384784,"score_spread":0.2365169996302582,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7162012872","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926507,0.000008632953,0.000028579354,0.0007781603,0.00065204734,0.00055990857,0.0003823981,0.000042292635,0.004897317],"genre_scores_gemma":[0.9823114,0.0000058025757,0.0001262246,0.0006099704,0.00006037587,0.000011304678,0.0015498714,0.00002437701,0.015300621],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984653,0.00010471735,0.00041269683,0.00037211733,0.00038393826,0.00026124506],"domain_scores_gemma":[0.99914044,0.00013406994,0.00023543251,0.00031912862,0.000049246693,0.000121677855],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00026438755,0.0002530931,0.00022743655,0.00008930882,0.0001728252,0.000043139815,0.00033531568,0.0003523682,0.010859381],"category_scores_gemma":[0.00012272179,0.00018544358,0.000118039716,0.00037630918,0.0001338043,0.00009316779,0.000057863424,0.00027940923,0.001112005],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016823836,0.000074016665,0.005696794,0.0000095148,0.000019756708,8.195427e-7,0.0003551463,0.00018463419,0.9830101,0.000042886048,0.010158068,0.00028000912],"study_design_scores_gemma":[0.0003639735,0.00007601947,0.5499033,0.00003277261,0.00007297772,0.0000024403596,0.00030122933,0.00032563866,0.44677874,0.000071741764,0.0017594245,0.0003117269],"about_ca_topic_score_codex":0.0013907447,"about_ca_topic_score_gemma":0.04470261,"teacher_disagreement_score":0.5442065,"about_ca_system_score_codex":0.000078412675,"about_ca_system_score_gemma":0.00008063336,"threshold_uncertainty_score":0.99966574},"labels":[],"label_agreement":null},{"id":"W7162020630","doi":"10.82308/20570","title":"Enhancing oil-spill bioremediation in sub-Arctic soils through the rational use of nutrients and silica nanocarriers for biostimulation","year":2023,"lang":"en","type":"dissertation","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Biostimulation; Bioremediation; Microcosm; Biodegradation; Soil water; Nutrient; Environmental remediation; Hydrocarbon; Microbial biodegradation","score_opus":0.020344348302684605,"score_gpt":0.25859281971814213,"score_spread":0.23824847141545752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7162020630","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99823385,0.00003782862,0.00009299264,0.0002188808,0.0005087934,0.00063419226,0.000119137214,0.000026920203,0.0001273943],"genre_scores_gemma":[0.9951507,0.00042543825,0.0005989451,0.00015841328,0.000043059987,0.00004246877,0.0022196223,0.000026472599,0.0013348795],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984354,0.00005665056,0.00054260646,0.00037572952,0.00037070405,0.0002189439],"domain_scores_gemma":[0.9990298,0.00037177143,0.00034364255,0.00015461091,0.000055283363,0.00004490552],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002987004,0.00020226823,0.0002104873,0.00008837586,0.000120483404,0.0000464492,0.00011847884,0.00023968577,0.00019468654],"category_scores_gemma":[0.00053690444,0.0001533599,0.00007043936,0.00044073138,0.000092842936,0.00026987295,0.0000336759,0.00010771625,0.000060395443],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029160915,0.000078192796,0.015591346,0.00022731377,0.000030986048,5.566265e-7,0.0036892833,0.0010910338,0.9721001,0.00011856533,0.002180962,0.004600067],"study_design_scores_gemma":[0.0024054297,0.00022432844,0.3888942,0.00031408973,0.00014309913,0.0000012307238,0.0021346032,0.007852152,0.59153575,0.0010491568,0.0045454153,0.0009005213],"about_ca_topic_score_codex":0.0007914942,"about_ca_topic_score_gemma":0.0075753583,"teacher_disagreement_score":0.38056433,"about_ca_system_score_codex":0.00015315051,"about_ca_system_score_gemma":0.000046147634,"threshold_uncertainty_score":0.6253835},"labels":[],"label_agreement":null},{"id":"W7162093274","doi":"10.82308/21033","title":"Characterization of pyrene degradation by Mycobacterium sp. strain S65","year":2002,"lang":"en","type":"dissertation","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pyrene; Fluoranthene; Phenanthrene; Bacteria; Strain (injury); Bioaugmentation; Dioxygenase; Naphthalene","score_opus":0.00749711076341024,"score_gpt":0.2029403424475704,"score_spread":0.19544323168416014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7162093274","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9818324,0.000009696254,0.0000521766,0.00006223736,0.00046503614,0.0002927656,0.00060656393,0.00004072455,0.016638443],"genre_scores_gemma":[0.85386896,0.00039693914,0.00023993762,0.00016964396,0.000063622894,0.000007631425,0.04102675,0.000040931274,0.10418557],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99868214,0.0000357531,0.0004346156,0.00032259553,0.0003442675,0.00018064179],"domain_scores_gemma":[0.9992934,0.000008230967,0.0004256679,0.00017855682,0.000022351609,0.00007182228],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009762456,0.00022230775,0.00022171969,0.000049716076,0.00004330926,0.000029183107,0.00017562193,0.0002841812,0.033206478],"category_scores_gemma":[0.000016524586,0.00020426097,0.000068221765,0.00021433186,0.00003615259,0.00019936926,0.000019579478,0.00010613793,0.0006453701],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016588909,0.000075429125,0.0012534049,0.000027577353,0.000007945754,2.697575e-7,0.0001429532,3.0017253e-7,0.9833967,0.0000055807127,0.0048257248,0.010247503],"study_design_scores_gemma":[0.00023477667,0.000050687213,0.1199307,0.00003141027,0.000028457742,6.4091427e-7,0.00007220506,0.000064620064,0.8642241,0.0000073638403,0.0150300935,0.00032497704],"about_ca_topic_score_codex":0.00012183316,"about_ca_topic_score_gemma":0.0003404172,"teacher_disagreement_score":0.12796338,"about_ca_system_score_codex":0.000085663494,"about_ca_system_score_gemma":0.0000108343565,"threshold_uncertainty_score":0.9676773},"labels":[],"label_agreement":null},{"id":"W7162107668","doi":"10.82308/45299","title":"Hydrocarbon biodegradation potential of residues generated during the in-situ burning of oil in the marine environment","year":2022,"lang":"en","type":"dissertation","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Diesel fuel; Hydrocarbon; Pollution prevention; Soil contamination","score_opus":0.005145577201082911,"score_gpt":0.196564371668426,"score_spread":0.19141879446734308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7162107668","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98868614,0.000046946836,6.730879e-7,0.000092917646,0.000090717986,0.00016293801,0.000009180928,0.000004596972,0.01090591],"genre_scores_gemma":[0.99607635,0.00046552872,0.000040455623,0.000029569774,0.000012838532,0.000010881223,0.00053628866,0.000009076997,0.002819003],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998528,0.00015731288,0.0004656905,0.00023120451,0.00047467847,0.00014311867],"domain_scores_gemma":[0.99943197,0.000023851959,0.00031797614,0.00020941548,0.000003216935,0.0000135959635],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00044674933,0.00014390284,0.0001692653,0.000084460815,0.000064646614,0.000010847747,0.00032226174,0.00008970721,0.0037167184],"category_scores_gemma":[0.0000143492,0.0000897735,0.000052894025,0.00030072915,0.000054006032,0.00005199188,0.00010768155,0.00022025053,0.00001111433],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008196276,0.00009130622,0.016413705,0.000028684413,0.0000068623744,0.000003674371,0.0011432718,0.0012491677,0.9782643,0.0000046520904,0.00003716726,0.0026752758],"study_design_scores_gemma":[0.00033296258,0.000032059477,0.63141245,0.000016416749,0.000015075563,0.0000013525513,0.0016711284,0.00014346886,0.3660327,0.000014115758,0.00020317256,0.00012513937],"about_ca_topic_score_codex":0.002617762,"about_ca_topic_score_gemma":0.0110792965,"teacher_disagreement_score":0.6149987,"about_ca_system_score_codex":0.00013838951,"about_ca_system_score_gemma":0.000012856942,"threshold_uncertainty_score":0.997194},"labels":[],"label_agreement":null},{"id":"W7162135625","doi":"10.82308/55514","title":"Evaluating the potential of alder-Frankia symbionts for the remediation and revegetation of oil sands tailings","year":2006,"lang":"en","type":"dissertation","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Tailings; Revegetation; Mineralization (soil science); Oil sands; Environmental remediation; Microcosm; Population","score_opus":0.014224744319428651,"score_gpt":0.2825302184742618,"score_spread":0.26830547415483313,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7162135625","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969471,0.00020273734,0.00020203955,0.00025902045,0.0004008697,0.00046989182,0.000031529067,0.000009193764,0.0014776235],"genre_scores_gemma":[0.9921833,0.00018683469,0.0010059326,0.000064407825,0.000067339766,0.000017394334,0.00053905224,0.000013445852,0.0059222803],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986458,0.00005832026,0.0004972098,0.00022395623,0.00044954757,0.00012518332],"domain_scores_gemma":[0.9989082,0.00017978247,0.0006434997,0.00016846527,0.000080452926,0.000019584659],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008343212,0.00014396576,0.00017698076,0.00002988647,0.00014857948,0.000020088837,0.00017839212,0.00016060207,0.00026521328],"category_scores_gemma":[0.00017928507,0.000082093065,0.00008982281,0.000143469,0.00010309842,0.0000795625,0.000023786453,0.000085801454,0.0000055849514],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012479025,0.00003063278,0.0008434538,0.00012351711,0.000022909491,4.1300716e-8,0.0006232996,0.00021816346,0.9453818,0.000024601755,0.0017152911,0.050891474],"study_design_scores_gemma":[0.002743006,0.00056411105,0.3563663,0.00027833815,0.00087293773,0.000002963096,0.0025981618,0.03574187,0.5979737,0.0009421016,0.0012599697,0.0006565654],"about_ca_topic_score_codex":0.00059989473,"about_ca_topic_score_gemma":0.0013743028,"teacher_disagreement_score":0.35552284,"about_ca_system_score_codex":0.000031212425,"about_ca_system_score_gemma":0.0000277986,"threshold_uncertainty_score":0.3347658},"labels":[],"label_agreement":null},{"id":"W7162204490","doi":"10.82308/13953","title":"An exploration of controlled experimental crude oil and dilbit spills in a pristine boreal freshwater lake, and the response of the indigenous bacterial community","year":2024,"lang":"en","type":"dissertation","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Oil spill; Crude oil; Novel ecosystem; Carbon stock","score_opus":0.012439150826636347,"score_gpt":0.25220879387008266,"score_spread":0.2397696430434463,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7162204490","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99833333,0.000064957705,2.817192e-7,0.00008690735,0.00016375557,0.00039810923,0.00014605116,0.0000074055424,0.0007991921],"genre_scores_gemma":[0.9985628,0.0000733678,0.0000353126,0.000042773307,0.0000144577,0.000021210526,0.0002809194,0.000010535685,0.0009586309],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983663,0.000744581,0.00041966297,0.00015562559,0.00020612199,0.00010770228],"domain_scores_gemma":[0.9993744,0.0001309256,0.00022229341,0.00022697136,0.000012376909,0.00003302468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009775448,0.00015776839,0.0003205926,0.000042366417,0.00010032033,0.000042254396,0.00019520751,0.00013234247,0.00042255188],"category_scores_gemma":[0.00007429857,0.00007983221,0.000048537928,0.00010860675,0.00030569138,0.0001581809,0.00008861268,0.0002013477,0.0000031699326],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012177858,0.00019288741,0.0017405928,0.000038721704,0.000018686322,7.6706255e-7,0.04110259,0.000001394464,0.9440102,0.000013868919,0.0000825054,0.00061995484],"study_design_scores_gemma":[0.012781848,0.00053437374,0.2134852,0.0001893501,0.00009680012,0.000003716274,0.013593577,0.00013485627,0.7580866,0.00013751129,0.00060498755,0.00035112875],"about_ca_topic_score_codex":0.002917639,"about_ca_topic_score_gemma":0.090068474,"teacher_disagreement_score":0.2117446,"about_ca_system_score_codex":0.000036115973,"about_ca_system_score_gemma":0.000028558356,"threshold_uncertainty_score":0.9265354},"labels":[],"label_agreement":null},{"id":"W7165774784","doi":"10.32629/rwc.v8i2.3742","title":"Removal of copper from contaminated waters using rhamnolipids","year":2025,"lang":"","type":"article","venue":"Region - Water Conservancy","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Universidad de Oriente; Agence Universitaire de la Francophonie","keywords":"Rhamnolipid; Copper; Contamination; Factorial experiment; Environmental remediation; Human decontamination","score_opus":0.021661974561877826,"score_gpt":0.2415250824707849,"score_spread":0.2198631079089071,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7165774784","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921316,0.0003385679,0.00029902565,0.0024415352,0.0019404376,0.0005490278,0.0001230469,0.00004576437,0.0021310025],"genre_scores_gemma":[0.99171555,0.00045816525,0.0006770315,0.0013177305,0.000056647506,0.0000018071493,0.00006329645,0.00002660756,0.0056831553],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968522,0.00025647585,0.0010153961,0.00079449284,0.00037412945,0.0007072759],"domain_scores_gemma":[0.99874306,0.000059222883,0.00027255877,0.00066421326,0.000079960955,0.0001809877],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00025680457,0.00045634145,0.0006407721,0.00015190801,0.00021651374,0.00007289134,0.0005054404,0.00034051476,0.002280368],"category_scores_gemma":[0.000029841944,0.00035315985,0.00023832847,0.00039438333,0.0007839716,0.00031759462,0.00042254507,0.0002436938,0.00054039154],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002822359,0.0001819103,0.06961038,0.000082542385,0.00012781967,0.00020743361,0.00096649217,0.000026803986,0.9219545,0.000029937979,0.0036300963,0.0028998556],"study_design_scores_gemma":[0.0025122215,0.000093013135,0.030369783,0.00066842,0.00023354177,0.000082555576,0.00028596102,0.0016405548,0.914033,0.0002763253,0.049184937,0.0006196981],"about_ca_topic_score_codex":0.003035228,"about_ca_topic_score_gemma":0.000104804174,"teacher_disagreement_score":0.04555484,"about_ca_system_score_codex":0.0003491486,"about_ca_system_score_gemma":0.0000945769,"threshold_uncertainty_score":0.99989206},"labels":[],"label_agreement":null},{"id":"W839534185","doi":"10.1371/journal.pone.0132062","title":"Salix purpurea Stimulates the Expression of Specific Bacterial Xenobiotic Degradation Genes in a Soil Contaminated with Hydrocarbons","year":2015,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; McGill University","funders":"Génome Québec; Genome Canada","keywords":"Monooxygenase; Dioxygenase; Fluoranthene; Xenobiotic; Biology; Rhodococcus; Gene; Gene expression; Rhizosphere; AlkB; Biochemistry; Cytochrome P450; Microbiology; Pyrene; Bacteria; Genetics; Enzyme","score_opus":0.03588698070426882,"score_gpt":0.1945894870060329,"score_spread":0.15870250630176408,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W839534185","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991104,0.000032088024,0.000011199731,0.00014654396,0.00003035223,0.000264652,0.0000100678235,0.000015526011,0.00037914785],"genre_scores_gemma":[0.99931884,0.000029925044,0.00042865606,0.000024122635,0.000022241258,0.000003207745,0.00003526072,0.00000753859,0.00013022343],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99919164,0.0000678792,0.00017871721,0.00015307269,0.00027884438,0.00012982058],"domain_scores_gemma":[0.9996531,0.000029257384,0.0000990516,0.0001525191,0.000011334744,0.000054738728],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016270098,0.00008965688,0.000131038,0.000025869775,0.00002689105,0.000016822618,0.00013194245,0.00005129865,0.00027244567],"category_scores_gemma":[0.000026307289,0.000054904613,0.000012555577,0.00018414401,0.00011070994,0.00009969141,0.000051617444,0.000058158777,0.000070855065],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012208348,0.00034045268,0.03550284,0.000004132586,0.00000650907,0.0000014397538,0.00043325406,0.000049236143,0.96320546,0.0000014807067,0.00011990233,0.00021319019],"study_design_scores_gemma":[0.00085364055,0.00012297477,0.03187365,0.000066136876,0.000016244929,7.805779e-7,0.00012498534,0.00044470903,0.966305,0.000016547407,0.00007900694,0.00009628285],"about_ca_topic_score_codex":0.00018410351,"about_ca_topic_score_gemma":0.00045918376,"teacher_disagreement_score":0.00362919,"about_ca_system_score_codex":0.00007421843,"about_ca_system_score_gemma":0.000015606523,"threshold_uncertainty_score":0.2983089},"labels":[],"label_agreement":null},{"id":"W857507229","doi":"10.1007/s11356-015-4947-z","title":"Characterization of the microbial community structure and the physicochemical properties of produced water and seawater from the Hibernia oil production platform","year":2015,"lang":"en","type":"article","venue":"Environmental Science and Pollution Research","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Fisheries and Oceans Canada; McGill University; National Research Council Canada","funders":"","keywords":"Seawater; Microorganism; Microbial population biology; Environmental chemistry; Produced water; Environmental science; Ecotoxicology; Chemistry; Ecology; Environmental engineering; Bacteria; Biology","score_opus":0.0344344371214861,"score_gpt":0.2353702203085477,"score_spread":0.20093578318706162,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W857507229","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957731,0.000023478018,1.3521006e-7,0.003840806,0.000057220623,0.0002453505,0.00003286202,0.000002223464,0.000024848958],"genre_scores_gemma":[0.99967295,0.00004995116,0.00000577191,0.00010950221,0.000032875472,0.000002881692,0.000009877577,0.000002762027,0.000113451315],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99871767,0.00024009026,0.00013173885,0.00017598612,0.0005681894,0.00016630815],"domain_scores_gemma":[0.99966025,0.00001315959,0.000052600033,0.00021083439,0.000014335626,0.000048836624],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0015945557,0.000070487025,0.00007683751,0.000014574606,0.00056379614,0.000041817144,0.00024528272,0.000035629655,0.000041157735],"category_scores_gemma":[0.00007437224,0.000027319227,0.000011495671,0.00014916442,0.005926676,0.00024455113,0.000611217,0.0002083482,0.000004170635],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008955915,0.000026319434,0.0076215556,0.000004183854,0.0000023300936,1.4913477e-8,0.0060710097,0.0000013706303,0.9841987,0.0000027168956,0.000049978025,0.00193226],"study_design_scores_gemma":[0.00028208963,0.000019940418,0.12671018,0.000009613673,0.0000040138925,0.0000025847573,0.00059950666,0.000037621714,0.8719309,0.000050445495,0.00031555665,0.00003756119],"about_ca_topic_score_codex":0.0008441803,"about_ca_topic_score_gemma":0.00007080344,"teacher_disagreement_score":0.11908863,"about_ca_system_score_codex":0.00007577989,"about_ca_system_score_gemma":0.000018247516,"threshold_uncertainty_score":0.9967786},"labels":[],"label_agreement":null},{"id":"W97310871","doi":"10.1023/a:1020698229326","title":"Remediation of PCBs in soil by surfactant washing and biodegradation in the wash by Pseudomonas sp. LB400","year":2002,"lang":"en","type":"article","venue":"Biotechnology Letters","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Environment and Climate Change Canada; University of Waterloo","funders":"","keywords":"Biodegradation; Environmental chemistry; Biphenyl; Chemistry; Soil contamination; Bioremediation; Contamination; Polychlorinated biphenyl; Organic chemistry; Ecology; Biology","score_opus":0.0075015882926637014,"score_gpt":0.1798530372853642,"score_spread":0.1723514489927005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W97310871","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9660705,0.00011078854,0.000034509583,0.03343015,0.000049344428,0.00017525017,0.000021053409,0.000023292368,0.00008516107],"genre_scores_gemma":[0.99763215,0.00052440143,0.00020991628,0.0015804663,0.000004928852,0.0000032293324,0.000023109804,0.0000056383537,0.000016147811],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99901813,0.000074670475,0.0002718187,0.0002509911,0.00017300936,0.00021138861],"domain_scores_gemma":[0.9996438,0.00004213954,0.0001210036,0.00017138214,0.0000020769864,0.000019612702],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003404303,0.000111079,0.0001251451,0.00008706167,0.000037019698,0.000012984579,0.00022291594,0.00022196295,0.00011300176],"category_scores_gemma":[0.000053412874,0.00008668928,0.000017548113,0.00040980772,0.00028578073,0.00012815138,0.00005650038,0.00020848305,0.00003872185],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000043488853,0.00004952485,0.038828153,0.0000029318321,0.0000016372418,0.0000016019922,0.0002587239,0.0000042340153,0.9324217,0.000008788865,0.023413792,0.005004581],"study_design_scores_gemma":[0.0011174241,0.00007402459,0.055327438,0.000022021872,0.000007794471,0.000010249621,0.0003143204,0.0014984309,0.9327833,0.00004417153,0.0084982,0.00030262303],"about_ca_topic_score_codex":0.00046707367,"about_ca_topic_score_gemma":0.0004745291,"teacher_disagreement_score":0.031849686,"about_ca_system_score_codex":0.0000861106,"about_ca_system_score_gemma":0.0000014480158,"threshold_uncertainty_score":0.35350862},"labels":[],"label_agreement":null},{"id":"W97327156","doi":"10.1007/978-3-540-77587-4_168","title":"Microbial Communities in Hydrocarbon-Contaminated Temperate, Tropical, Alpine, and Polar Soils","year":2009,"lang":"en","type":"book-chapter","venue":"","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"","keywords":"Actinobacteria; Microbial population biology; Proteobacteria; Soil water; Environmental science; Dominance (genetics); Nutrient; Environmental chemistry; Contamination; Ecology; Soil science; Biology; Chemistry; Bacteria","score_opus":0.009630332710001006,"score_gpt":0.19492962965068802,"score_spread":0.18529929694068703,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W97327156","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32087824,0.000192005,0.0000025514723,0.0004835319,0.00012627062,0.000478561,0.00009586351,0.00008252645,0.67766047],"genre_scores_gemma":[0.62805045,0.0013183567,0.00027209698,0.0024663482,0.000057831177,0.000001650799,0.0002131572,0.000041046173,0.36757907],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99876463,0.00004222319,0.00041237805,0.00030732027,0.0001809038,0.0002925489],"domain_scores_gemma":[0.9994711,0.000028539753,0.00011118988,0.00026692013,0.0000083666155,0.00011386346],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010845218,0.00035612198,0.0003835576,0.00009817416,0.00008516195,0.00006442454,0.00024234099,0.00041613352,0.0072048604],"category_scores_gemma":[0.0000062086942,0.00031089957,0.00006161758,0.000045258177,0.00033975314,0.00011137361,0.00017327911,0.0004109571,0.00046516524],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005559006,0.00079718593,0.080383174,0.0001873174,0.00024723646,0.00029855786,0.004158855,0.00003121348,0.69306946,0.010768011,0.13551416,0.07398894],"study_design_scores_gemma":[0.004011167,0.00068219926,0.086395934,0.00046941673,0.00009417756,0.000096649586,0.0002517156,0.00030393575,0.010378079,0.0017767738,0.89259195,0.0029480264],"about_ca_topic_score_codex":0.0015111467,"about_ca_topic_score_gemma":0.010958449,"teacher_disagreement_score":0.75707775,"about_ca_system_score_codex":0.00016368389,"about_ca_system_score_gemma":0.000018726356,"threshold_uncertainty_score":0.9999343},"labels":[],"label_agreement":null}]}