{"meta":{"query_hash":"6fcbb4d2f669","filters":{"topic":"Yersinia bacterium, plague, ectoparasites research"},"cohort_total":514,"direct_labels_cover":0,"predictions_cover":514,"exported":514,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/6fcbb4d2f669","api":"https://metacan.xera.ac/api/v1/cohort?topic=Yersinia+bacterium%2C+plague%2C+ectoparasites+research"},"results":[{"id":"W1123396362","doi":"","title":"Detecting pathogenic Yersinia enterocolitica in surface water from the Grand River watershed: An evaluation and comparison of methods","year":2008,"lang":"en","type":"dissertation","venue":"UWSpace (University of Waterloo)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Water Network; Ontario Ministry of Health and Long-Term Care; Public Health Agency; Public Health Agency of Canada","keywords":"Yersinia enterocolitica; Watershed; Surface water; Hydrology (agriculture); Environmental science; Biology; Geology; Computer science; Environmental engineering; Machine learning; Bacteria; Geotechnical engineering","score_opus":0.02981866425974371,"score_gpt":0.3190340072081037,"score_spread":0.28921534294836,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1123396362","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99644816,0.0005153983,0.0014003834,0.000070746595,0.0000112994585,0.00016935478,0.00033414582,0.000022342629,0.0010281919],"genre_scores_gemma":[0.97842455,0.0017230536,0.016584372,0.00008382557,0.000016930462,0.00021478407,0.0010188996,0.000009872326,0.001923744],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989741,0.00027796076,0.000092535476,0.00021229996,0.00036929816,0.00007391262],"domain_scores_gemma":[0.9992854,0.0001726409,0.0001526714,0.00002402932,0.00031915947,0.000046072117],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00096208556,0.00048471204,0.00030865043,0.0012026391,0.00049692637,0.00078053033,0.000369241,0.00044424695,0.00050430495],"category_scores_gemma":[0.000973184,0.00022108076,0.0002772094,0.0012816387,0.00042173688,0.0003598963,0.00038393724,0.000214874,0.00016366653],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005213958,0.000575661,0.7581322,0.0005884481,0.00008054711,0.0005953843,0.0029722617,0.0003652005,0.19347458,0.00007885521,0.00023728494,0.042378064],"study_design_scores_gemma":[0.000020095044,0.0020778999,0.9471173,0.00007772836,0.0001196086,0.00082678575,0.0048075947,0.0026908098,0.039252095,0.00003902189,0.0029255592,0.000045304016],"about_ca_topic_score_codex":0.02372344,"about_ca_topic_score_gemma":0.048263244,"teacher_disagreement_score":0.9762766,"about_ca_system_score_codex":0.00058087846,"about_ca_system_score_gemma":0.0005924846,"threshold_uncertainty_score":0.04717076},"labels":[],"label_agreement":null},{"id":"W11345415","doi":"10.69645/rfal4387","title":"The molecular basis of bacterial pathogenicity: an overview","year":2009,"lang":"en","type":"article","venue":"The biomedical & life sciences collection.","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Pathogenicity; Basis (linear algebra); Pathogenicity island; Biology; Computational biology; Microbiology; Bacteria; Genetics; Mathematics","score_opus":0.027045976401818043,"score_gpt":0.3254213445679245,"score_spread":0.29837536816610644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W11345415","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002618329,0.98953,0.0031474556,0.0010492255,0.00016728866,0.000013634384,0.00008656105,0.000036787504,0.0033506553],"genre_scores_gemma":[0.0069443765,0.98943406,0.00222735,0.00024614716,0.00035634433,0.00001977149,0.00019113097,0.000003264143,0.00057740806],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997837,0.000026930322,0.000024965595,0.000043001382,0.00007630123,0.000045254474],"domain_scores_gemma":[0.99975973,0.00011296157,0.000028635724,0.0000130181925,0.00005034884,0.000035384215],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006250914,0.00087698805,0.0014050202,0.0025787374,0.0004262727,0.001893515,0.000902135,0.0013821963,0.001365543],"category_scores_gemma":[0.00034954905,0.0004411991,0.0005343676,0.0016502576,0.00084577274,0.0022534614,0.0008764626,0.0018469213,0.0011453507],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064718723,0.00024393293,0.0022579876,0.013960825,0.00014365371,0.0013512359,0.00025584095,0.0019715114,0.06905636,0.028302157,0.014549192,0.8672601],"study_design_scores_gemma":[0.00005986916,0.0005995415,0.008210695,0.0024763243,0.00022706104,0.0057555162,0.00035959267,0.001396745,0.012051183,0.036702335,0.93205947,0.00010165378],"about_ca_topic_score_codex":0.001361719,"about_ca_topic_score_gemma":0.0010838576,"teacher_disagreement_score":0.0025787374,"about_ca_system_score_codex":0.0009860571,"about_ca_system_score_gemma":0.00116113,"threshold_uncertainty_score":0.0071543455},"labels":[],"label_agreement":null},{"id":"W127142831","doi":"10.1093/obo/9780195399301-0062","title":"Plague and its Consequences","year":2010,"lang":"en","type":"reference-entry","venue":"Renaissance and Reformation","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Plague (disease); History; Subject (documents); Civilization; Character (mathematics); Urbanization; Sociology; Criminology; Demography; Ancient history; Archaeology","score_opus":0.019386782425909774,"score_gpt":0.28460872395776765,"score_spread":0.26522194153185785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W127142831","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07929628,0.41298938,0.00147212,0.06678366,0.0028584164,0.00004292344,0.0008262611,0.000060811042,0.43567014],"genre_scores_gemma":[0.5482583,0.38001195,0.0008527674,0.008880792,0.0020688977,0.000026682232,0.00050507503,0.000023721963,0.05937183],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99941385,0.00019317333,0.000041500167,0.000067948095,0.00017145737,0.00011212111],"domain_scores_gemma":[0.99952555,0.0000974892,0.000111467365,0.000029951092,0.00018490778,0.00005074433],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063493673,0.000284314,0.00021413773,0.00083466986,0.0008455617,0.0017685428,0.00022017852,0.0011201035,0.012311433],"category_scores_gemma":[0.0016230791,0.00009053264,0.00017502115,0.00079975615,0.0015078563,0.0014183958,0.0013398776,0.0009978932,0.0015741063],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041996417,0.00023781475,0.034969732,0.0022922761,0.00008809914,0.006205902,0.0077066785,0.0010783885,0.006525138,0.34646916,0.133646,0.4603609],"study_design_scores_gemma":[0.000010854026,0.00014535441,0.03178133,0.0017070002,0.000023762786,0.0047561876,0.0046519157,0.0001105971,0.0010375987,0.03268602,0.92306244,0.000026964075],"about_ca_topic_score_codex":0.0071146954,"about_ca_topic_score_gemma":0.005628439,"teacher_disagreement_score":0.012311433,"about_ca_system_score_codex":0.0012643225,"about_ca_system_score_gemma":0.0011406624,"threshold_uncertainty_score":0.041185856},"labels":[],"label_agreement":null},{"id":"W1479621742","doi":"10.1016/s2222-1808(15)60897-0","title":"Leptopsylla taschenbergi taschenbergi (Siphonaptera: Leptopsyllidae), new flea from Iran","year":2015,"lang":"en","type":"article","venue":"Asian Pacific Journal of Tropical Disease","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Flea; Apodemus; Clearance; Apodemus agrarius; Biology; Veterinary medicine; Rodent; Zoology; Ecology; Medicine","score_opus":0.022959239279237688,"score_gpt":0.27408273239557174,"score_spread":0.25112349311633403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1479621742","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99443203,0.0019894943,0.0003650474,0.000111371926,0.000035432648,0.000058177822,0.0003703296,0.000020277694,0.0026177962],"genre_scores_gemma":[0.9951389,0.0013049409,0.0016025756,0.00013263182,0.00003494618,0.000021895577,0.00070473796,0.0000025267245,0.0010567415],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99992883,0.000005485909,0.000007723729,0.000023139224,0.000020699736,0.000014063132],"domain_scores_gemma":[0.9999325,0.0000064369865,0.000027519625,0.0000043979567,0.000012722549,0.00001634192],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012649073,0.00049757573,0.00022663502,0.0014526595,0.00077623053,0.000337523,0.00022426128,0.0002636872,0.0012311296],"category_scores_gemma":[0.00013131648,0.00020025199,0.0002046138,0.0005704179,0.00033122336,0.0005178104,0.00027747036,0.00030763308,0.0002747238],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00057751633,0.00038075735,0.7236861,0.0005052793,0.00011274568,0.009151892,0.006192692,0.00024741836,0.118802376,0.00039786182,0.0024692933,0.13747607],"study_design_scores_gemma":[0.000018473847,0.0003794651,0.9780247,0.0000578876,0.000049299357,0.010485941,0.0023934643,0.00022809253,0.0018725609,0.0001875864,0.006285606,0.000017013437],"about_ca_topic_score_codex":0.011173753,"about_ca_topic_score_gemma":0.03694077,"teacher_disagreement_score":0.011173753,"about_ca_system_score_codex":0.0003346054,"about_ca_system_score_gemma":0.0003806547,"threshold_uncertainty_score":0.022217453},"labels":[],"label_agreement":null},{"id":"W1489315571","doi":"10.1111/mmi.12011","title":"<scp>H</scp>fq‐dependent, co‐ordinate control of cyclic diguanylate synthesis and catabolism in the plague pathogen <i><scp>Y</scp>ersinia pestis</i>","year":2012,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Networks of Centres of Excellence of Canada; National Institutes of Health; National Institute of General Medical Sciences; Northwestern University","keywords":"Biology; Biofilm; Messenger RNA; Cell biology; RNA; Pathogen; Microbiology; Biochemistry; Genetics; Gene; Bacteria","score_opus":0.006893839547240144,"score_gpt":0.24241123043961305,"score_spread":0.2355173908923729,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1489315571","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943831,0.001604324,0.0022027513,0.00016332211,0.000023854267,0.00002208009,0.00030320793,0.000096304924,0.0012010298],"genre_scores_gemma":[0.99639004,0.00039019948,0.0016792382,0.000082964885,0.000010067797,0.000022170889,0.00025585858,0.000019514813,0.0011497365],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999207,0.000011988448,0.00000515481,0.000020569689,0.000020747395,0.000020873718],"domain_scores_gemma":[0.9999336,0.000013436231,0.000018773148,0.0000069256325,0.000009249182,0.000018011377],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000105458224,0.000222442,0.00021028733,0.00007989654,0.000114478025,0.00021338787,0.000142687,0.00019413188,0.000675136],"category_scores_gemma":[0.00009738164,0.00008606013,0.00011753505,0.000075423566,0.0002130632,0.00012965284,0.00016300291,0.00027261738,0.00020780067],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043038126,0.0000041064154,0.00003928421,0.000007324618,7.328471e-7,0.000013608978,0.0000033022325,0.00002037725,0.99940014,0.000022554485,0.000017975726,0.0004275995],"study_design_scores_gemma":[0.000016176542,0.00016533167,0.0071192784,0.0000022324086,0.0000032642397,0.00008084115,0.000018410068,0.0013959749,0.9900636,0.000046956597,0.0010821172,0.000005761981],"about_ca_topic_score_codex":0.0017893593,"about_ca_topic_score_gemma":0.0019351745,"teacher_disagreement_score":0.0017893593,"about_ca_system_score_codex":0.00039833682,"about_ca_system_score_gemma":0.00018701458,"threshold_uncertainty_score":0.0035578609},"labels":[],"label_agreement":null},{"id":"W1518740225","doi":"10.1111/j.1365-2249.2007.03452.x","title":"The fraction 1 and V protein antigens of <i>Yersinia pestis</i> activate dendritic cells to induce primary T cell responses","year":2007,"lang":"en","type":"article","venue":"Clinical & Experimental Immunology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Canadian Science Centre for Human and Animal Health","funders":"","keywords":"Biology; Yersinia pestis; Antigen; Immunology; Dendritic cell; Antigen-presenting cell; Bone marrow; T cell; Spleen; Immune system; Cell biology; Microbiology; Virulence","score_opus":0.022244451420305945,"score_gpt":0.35875786834808665,"score_spread":0.3365134169277807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1518740225","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948372,0.0010168873,0.0016326462,0.00007056967,0.000033323373,0.000052742158,0.00026191675,0.000053347685,0.002041307],"genre_scores_gemma":[0.99522686,0.00071368314,0.0016323287,0.0000910314,0.0000365531,0.000037245198,0.0004505597,0.00001446501,0.0017972355],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986994,0.000019301347,0.0000073456654,0.000018013941,0.000013747757,0.00007166897],"domain_scores_gemma":[0.99993527,0.000024354611,0.000009477587,0.0000074246204,0.000007966359,0.000015409765],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012686713,0.0005107282,0.0002810763,0.00014879988,0.00010167257,0.00026311915,0.00007661189,0.00023485754,0.0018237038],"category_scores_gemma":[0.00010543198,0.00011505344,0.0002998601,0.000102235776,0.000093640214,0.00015346461,0.00017102077,0.00049036165,0.0006560307],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000086483466,0.000031042466,0.0002380021,0.000040409584,0.0000026930104,0.000038257313,0.0000106303205,0.000044538043,0.998168,0.000025426747,0.00003620493,0.0012781733],"study_design_scores_gemma":[0.000037375652,0.0007959007,0.0057180985,0.00001412041,0.000016944832,0.00025040627,0.00003852716,0.00054480945,0.9907499,0.000055378885,0.0017750126,0.0000036354033],"about_ca_topic_score_codex":0.00026827992,"about_ca_topic_score_gemma":0.00046082505,"teacher_disagreement_score":0.0018237038,"about_ca_system_score_codex":0.00020438508,"about_ca_system_score_gemma":0.00015133689,"threshold_uncertainty_score":0.0061008334},"labels":[],"label_agreement":null},{"id":"W1521959370","doi":"10.4000/vertigo.14437","title":"La maladie de Lyme entre cadrage infectieux, vectoriel et zoonotique : vers une écologisation des problèmes sanitaires ?","year":2013,"lang":"fr","type":"article","venue":"VertigO","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Humanities; Biology; Political science; Art","score_opus":0.011171558182157029,"score_gpt":0.2668399345459198,"score_spread":0.2556683763637628,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1521959370","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.50516754,0.17866635,0.016327104,0.23857015,0.0018254133,0.00022249637,0.0007860332,0.0002353347,0.05819962],"genre_scores_gemma":[0.8963665,0.06935039,0.0101520475,0.008722329,0.0014909904,0.000105279054,0.0003589706,0.00003449728,0.013419132],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9973724,0.0011063392,0.00016030522,0.00030320024,0.0005345908,0.0005232661],"domain_scores_gemma":[0.9965411,0.00087634067,0.0012733827,0.00011148399,0.00080403086,0.0003936456],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0031263656,0.00073918473,0.0007937431,0.0028059366,0.0020181243,0.0068661217,0.00067723816,0.0015422769,0.003647196],"category_scores_gemma":[0.0030416255,0.00021956534,0.0006523824,0.0017246463,0.004001808,0.0032290954,0.0021393583,0.001415926,0.00045695598],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026957132,0.00048049472,0.36052495,0.0030225143,0.00033177735,0.0019415189,0.036536995,0.0031845768,0.008880046,0.109199665,0.021550102,0.45407775],"study_design_scores_gemma":[0.000037221136,0.0013067856,0.44078803,0.0030159606,0.00019720529,0.0038998122,0.039033838,0.002119636,0.0023242526,0.01817848,0.48887843,0.00022040118],"about_ca_topic_score_codex":0.08840583,"about_ca_topic_score_gemma":0.089422755,"teacher_disagreement_score":0.08840583,"about_ca_system_score_codex":0.005607454,"about_ca_system_score_gemma":0.009156125,"threshold_uncertainty_score":0.17578256},"labels":[],"label_agreement":null},{"id":"W1525917759","doi":"10.22621/cfn.v126i1.1296","title":"An Extra-Limital Population of Black-tailed Prairie Dogs, &lt;em&gt;Cynomys ludovicianus&lt;/em&gt;, in Central Alberta","year":2012,"lang":"en","type":"article","venue":"The Canadian Field-Naturalist","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Alberta Environment and Protected Areas","funders":"Parks Canada","keywords":"Cynomys ludovicianus; Prairie dog; Geography; Ecology; Population; Range (aeronautics); Threatened species; Ecotone; Overwintering; Disjunct; Fishery; Forestry; Biology; Demography; Habitat","score_opus":0.013418967626416945,"score_gpt":0.2591201347315401,"score_spread":0.24570116710512316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1525917759","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986513,0.000085973996,0.0000609858,0.000028991702,0.0000016206105,0.0000064316455,0.00009399522,0.0000046988644,0.0010659937],"genre_scores_gemma":[0.9983468,0.000090260306,0.00018745082,0.000025640786,0.0000016127724,0.0000028406282,0.00020382319,0.000001305139,0.0011401504],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99982685,0.000011257654,0.0000040140744,0.000046985962,0.000050309452,0.000060570936],"domain_scores_gemma":[0.99979097,0.000010161721,0.00003519208,0.0000099848,0.000070950155,0.000082880666],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017528467,0.00015524105,0.0001682865,0.00067856384,0.0013378947,0.00052700803,0.0005661022,0.00015831631,0.00086666865],"category_scores_gemma":[0.00023194149,0.00016816556,0.00008833366,0.000771927,0.0007404206,0.0001392518,0.00036669284,0.00027517072,0.00010294936],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022344591,0.00008566174,0.9642975,0.000036305657,0.000046646917,0.0012490823,0.0041343216,0.0002790606,0.010669835,0.00029326408,0.00086627953,0.017818624],"study_design_scores_gemma":[0.0000057475813,0.000029627618,0.9969216,0.0000067907636,0.000009155941,0.00031026965,0.0016902357,0.00015452271,0.00014286915,0.00002151321,0.00070346973,0.0000040554337],"about_ca_topic_score_codex":0.92062306,"about_ca_topic_score_gemma":0.9827336,"teacher_disagreement_score":0.079376936,"about_ca_system_score_codex":0.004501868,"about_ca_system_score_gemma":0.0032244117,"threshold_uncertainty_score":0.15968877},"labels":[],"label_agreement":null},{"id":"W1531322703","doi":"10.1002/9780813818634.ch8","title":"High Pathogenicity Avian Influenza in the Americas","year":2008,"lang":"en","type":"other","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pathogenicity; Influenza A virus subtype H5N1; Avian influenza virus; Biology; Virology; Plague (disease); Geography; Virus; Microbiology; Archaeology","score_opus":0.01889004009282268,"score_gpt":0.30103184320121434,"score_spread":0.28214180310839165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1531322703","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.010263539,0.06600559,0.0015395029,0.0052833003,0.0054921205,0.00014611705,0.00566513,0.00042603424,0.9051787],"genre_scores_gemma":[0.05314314,0.13241199,0.010302862,0.002700636,0.0038291877,0.00013881015,0.01620844,0.00014193264,0.7811231],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9998797,0.000011757467,0.0000085726615,0.00001882407,0.00006241483,0.000018600702],"domain_scores_gemma":[0.99980074,0.000011661924,0.000018655226,0.000008570243,0.00012139922,0.000038832284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002671301,0.00042454165,0.0001473289,0.0007919012,0.00030853302,0.00060461427,0.0002565151,0.00029088737,0.029846327],"category_scores_gemma":[0.0002484342,0.00008744795,0.00014305388,0.00093734363,0.00011060537,0.0005203454,0.00043074592,0.0004463807,0.010799111],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037615693,0.00008432498,0.0073756273,0.00037797203,0.000010979695,0.00021892675,0.00016457571,0.00012014818,0.0037815752,0.0028044104,0.51423985,0.47078407],"study_design_scores_gemma":[0.0000036087365,0.000023246743,0.027234247,0.00029475286,0.0000065541817,0.00023458281,0.00012444028,0.0000580005,0.00034341734,0.00039684825,0.9712767,0.0000034403918],"about_ca_topic_score_codex":0.016807444,"about_ca_topic_score_gemma":0.0265083,"teacher_disagreement_score":0.029846327,"about_ca_system_score_codex":0.0005221163,"about_ca_system_score_gemma":0.00086970424,"threshold_uncertainty_score":0.099845946},"labels":[],"label_agreement":null},{"id":"W1532214538","doi":"10.22621/cfn.v117i3.810","title":"Death of Gray Wolves, &lt;em&gt;Canis lupus&lt;/em&gt;, in Porcupine &lt;em&gt;Erethizon dorsatum&lt;/em&gt;, Dens in Wisconsin","year":2003,"lang":"en","type":"article","venue":"The Canadian Field-Naturalist","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Texas Tech University; Texas Parks and Wildlife Department","keywords":"Porcupine; Canis; Gray wolf; Systemic lupus erythematosus; Mange; Gray (unit); Zoology; Biology; Medicine; Ecology; Internal medicine","score_opus":0.014765422878153321,"score_gpt":0.25481092891003093,"score_spread":0.2400455060318776,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1532214538","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996588,0.00004101652,0.000012228016,0.000009400551,7.8029274e-7,0.0000013373988,0.0001304094,7.763099e-7,0.00014516289],"genre_scores_gemma":[0.99917513,0.00007910029,0.00003657691,0.000015810901,8.931085e-7,0.0000023303028,0.0002825745,3.9929066e-7,0.00040724443],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998728,0.000011352012,0.000010106032,0.00003285365,0.000026082986,0.000046722602],"domain_scores_gemma":[0.99968994,0.000018074605,0.00014265046,0.000017621087,0.000060451217,0.00007136167],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016384483,0.00015016152,0.000072695555,0.00051732844,0.00054295245,0.0003376768,0.00021090357,0.000199704,0.0006864216],"category_scores_gemma":[0.0003965788,0.00014971159,0.000078326215,0.00035843716,0.00043571176,0.00026486767,0.00029719132,0.0001702491,0.00010588033],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058999223,0.0000075426083,0.9965198,0.0000048172797,0.0000114868535,0.00015166025,0.00036806095,0.000025448608,0.0009783818,0.000015011629,0.00014151436,0.0017173757],"study_design_scores_gemma":[9.0717543e-7,0.000019973037,0.99885595,0.0000034164755,0.000005581673,0.00015697611,0.00051373313,0.000025384696,0.00021024744,0.0000049433147,0.00020183003,0.0000011639214],"about_ca_topic_score_codex":0.15951802,"about_ca_topic_score_gemma":0.50512016,"teacher_disagreement_score":0.15951802,"about_ca_system_score_codex":0.0012487045,"about_ca_system_score_gemma":0.00041556923,"threshold_uncertainty_score":0.31717902},"labels":[],"label_agreement":null},{"id":"W1535611854","doi":"10.1002/9780470958209.ch2","title":"Subversion of the Immune Response by Bacterial Pathogens","year":2010,"lang":"en","type":"other","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Subversion; Immune system; Biology; Microbiology; Immunology; Political science","score_opus":0.005051413264605648,"score_gpt":0.24369364026349177,"score_spread":0.23864222699888613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1535611854","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.794561,0.03895359,0.0056183846,0.0011690493,0.00063559687,0.000112018126,0.0009530817,0.00049556256,0.15750168],"genre_scores_gemma":[0.87245196,0.016472677,0.002750462,0.0004805964,0.00037951683,0.00006830916,0.0009286089,0.000067883986,0.10640006],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998921,0.000022897677,0.0000062855456,0.000018253513,0.000028405288,0.000032040494],"domain_scores_gemma":[0.99990785,0.000014833174,0.000011497473,0.000021069067,0.0000124625485,0.000032290514],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024067935,0.00056053896,0.00027958545,0.00046572418,0.00016600428,0.00068011764,0.0002083347,0.00031175595,0.009272458],"category_scores_gemma":[0.00013280073,0.00008625871,0.0002525349,0.00017967456,0.00019840655,0.00038269538,0.00046571708,0.00053587044,0.0022686191],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015343113,0.00024220023,0.0010897835,0.0002594309,0.000015666512,0.0004593963,0.000048918348,0.00024028216,0.88318634,0.0037401235,0.0014633103,0.10772021],"study_design_scores_gemma":[0.00019632431,0.001984046,0.049911086,0.00008520846,0.000065954795,0.0033498476,0.0001439805,0.0012235105,0.80991447,0.003505645,0.12960446,0.000015478196],"about_ca_topic_score_codex":0.00018428011,"about_ca_topic_score_gemma":0.00025695303,"teacher_disagreement_score":0.009272458,"about_ca_system_score_codex":0.00027680505,"about_ca_system_score_gemma":0.00015445275,"threshold_uncertainty_score":0.03101945},"labels":[],"label_agreement":null},{"id":"W1551304137","doi":"10.1080/03612759.2000.10525481","title":"The Great Plague","year":2000,"lang":"en","type":"article","venue":"History Reviews of New Books","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"","keywords":"Plague (disease); Geography; Archaeology","score_opus":0.046623089107359114,"score_gpt":0.2878452061795211,"score_spread":0.24122211707216196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1551304137","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00055235525,0.44041744,0.0009290563,0.08617465,0.09351732,0.00005845805,0.00042345093,0.00026707837,0.37766024],"genre_scores_gemma":[0.005837641,0.13680798,0.00080855313,0.05302077,0.03589147,0.000054217155,0.0003716196,0.000087402426,0.7671204],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99937373,0.0001217532,0.0000242729,0.00012009764,0.00029062122,0.00006960868],"domain_scores_gemma":[0.9995702,0.000082761115,0.00003290453,0.00004939093,0.00014510089,0.00011967702],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072924444,0.0009785183,0.00068868155,0.0012125833,0.001061219,0.0036172916,0.00058813265,0.0021106065,0.062134936],"category_scores_gemma":[0.0018814254,0.00030177244,0.0003629496,0.0010562843,0.0016982557,0.0027189222,0.002035746,0.0039091026,0.044940688],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027619319,0.000010451616,0.00015852373,0.00016107771,0.000007317811,0.000045715697,0.0001318578,0.000022903572,0.00027634113,0.013001158,0.9073049,0.07885209],"study_design_scores_gemma":[0.000001344646,0.000004988558,0.00013399085,0.000050518665,0.0000010722804,0.000037389927,0.000031735173,0.0000029546643,0.000013646955,0.0008450459,0.99887615,0.0000011637451],"about_ca_topic_score_codex":0.002662157,"about_ca_topic_score_gemma":0.0069218623,"teacher_disagreement_score":0.062134936,"about_ca_system_score_codex":0.0011611959,"about_ca_system_score_gemma":0.0017238107,"threshold_uncertainty_score":0.20786208},"labels":[],"label_agreement":null},{"id":"W1568932012","doi":"10.1002/bies.201400038","title":"Bacterial subversion of host cytoskeletal machinery: Hijacking formins and the Arp2/3 complex","year":2014,"lang":"en","type":"review","venue":"BioEssays","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University of Ottawa; Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Formins; Biology; Cell biology; Actin; Host (biology); Effector; Cytoskeleton; Actin cytoskeleton; Cell; Genetics","score_opus":0.033066453860323836,"score_gpt":0.3300656286954031,"score_spread":0.2969991748350793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1568932012","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00023761917,0.9979963,0.00013067304,0.00021306465,0.00016758617,0.000004341021,0.000017855069,0.000009456838,0.0012231937],"genre_scores_gemma":[0.0007395872,0.9982363,0.0001571559,0.00010989942,0.000082166865,0.0000049773053,0.000024002604,0.000001189381,0.0006445702],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998783,0.000015425854,0.000016893873,0.000022606804,0.000049839164,0.000016876935],"domain_scores_gemma":[0.9998357,0.00005648893,0.000030005222,0.0000056671124,0.00004574168,0.00002634056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003741295,0.00072394666,0.0010653113,0.002014575,0.00028042318,0.0009020838,0.0006427017,0.0010508623,0.0029812425],"category_scores_gemma":[0.00041510878,0.00028085773,0.00036539874,0.001671526,0.00038905325,0.0015173807,0.00061332656,0.0011380027,0.0023318222],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000086008986,0.000061545805,0.0002125647,0.017165063,0.00007620083,0.00034231038,0.00006017304,0.00028609083,0.006465323,0.0038844226,0.024057783,0.9473025],"study_design_scores_gemma":[0.000013820013,0.00009180439,0.000829348,0.0014534626,0.00006106387,0.001336988,0.000052806678,0.00006854245,0.0013832469,0.0012110423,0.9934814,0.000016478545],"about_ca_topic_score_codex":0.0006279025,"about_ca_topic_score_gemma":0.001225498,"teacher_disagreement_score":0.0029812425,"about_ca_system_score_codex":0.0005479969,"about_ca_system_score_gemma":0.0008648558,"threshold_uncertainty_score":0.009973288},"labels":[],"label_agreement":null},{"id":"W1587841974","doi":"10.1080/00155870600707888","title":"Cryptozoology in the Medieval and Modern Worlds","year":2006,"lang":"en","type":"article","venue":"Folklore","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Context (archaeology); Resentment; Subject (documents); The Imaginary; Natural (archaeology); Aesthetics; Sociology; History; Epistemology; Art; Psychology; Psychoanalysis; Philosophy; Political science; Computer science; Law; Politics; Archaeology; World Wide Web","score_opus":0.007969129556141584,"score_gpt":0.2583935387081956,"score_spread":0.250424409152054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1587841974","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10921056,0.22219561,0.002099453,0.15053453,0.0045659705,0.000030675896,0.00018679096,0.000064692074,0.51111174],"genre_scores_gemma":[0.9085458,0.04026058,0.000712455,0.009582446,0.0038999892,0.000023180917,0.000049646456,0.000037229784,0.036888614],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990356,0.0005952837,0.000027663058,0.000088066576,0.00012931647,0.000124096],"domain_scores_gemma":[0.99939024,0.0003042463,0.00008917662,0.000049427646,0.00005367214,0.00011316227],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017003882,0.00031143066,0.00023923615,0.0020202307,0.0059664114,0.006899596,0.00042723172,0.0020099902,0.004934226],"category_scores_gemma":[0.0013411044,0.00016573603,0.0000969019,0.0014991916,0.029700657,0.006518295,0.004510859,0.003372052,0.0003162876],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035643017,0.000028898314,0.00035937256,0.00009415579,0.0000054606003,0.0002824667,0.07510794,0.000088843866,0.0002670457,0.8864999,0.016981205,0.020249082],"study_design_scores_gemma":[0.000006625321,0.000017477283,0.0015168868,0.00025796998,0.0000021352325,0.00038832388,0.026518326,0.000055775345,0.00014876787,0.09282813,0.8782481,0.000011463379],"about_ca_topic_score_codex":0.006702336,"about_ca_topic_score_gemma":0.009907419,"teacher_disagreement_score":0.006899596,"about_ca_system_score_codex":0.0055001406,"about_ca_system_score_gemma":0.0016917145,"threshold_uncertainty_score":0.0399065},"labels":[],"label_agreement":null},{"id":"W1590209696","doi":"10.3133/fs20123087","title":"Sylvatic plague vaccine and management of prairie dogs","year":2012,"lang":"en","type":"article","venue":"Fact sheet","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Plague (disease); Cynomys ludovicianus; Prairie dog; Wildlife; Outbreak; Flea; Geography; Veterinary medicine; Ecology; Biology; Virology; Archaeology; Medicine","score_opus":0.013823716667686156,"score_gpt":0.287277328524347,"score_spread":0.27345361185666084,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1590209696","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93443626,0.023500482,0.0020054146,0.02126611,0.00018341035,0.00027518874,0.00021781349,0.0001033441,0.018011985],"genre_scores_gemma":[0.98691314,0.007318541,0.002918691,0.00095912797,0.00011733838,0.00008958547,0.00019396373,0.0000033487693,0.0014862783],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991862,0.000460004,0.000046040317,0.00006567667,0.00015258057,0.00008941744],"domain_scores_gemma":[0.9992649,0.00007164111,0.00029800006,0.000024342926,0.00015027114,0.00019080953],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001829151,0.00014773165,0.000098427176,0.000472455,0.0003864182,0.0005605804,0.00065856276,0.0005290249,0.0010899242],"category_scores_gemma":[0.0022700108,0.00008936033,0.00013784641,0.00016586282,0.00027196863,0.00057054515,0.00046490628,0.00047118874,0.00021920889],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00075563183,0.0021613124,0.3719042,0.00060296786,0.00015106569,0.0012688456,0.0021256707,0.003088974,0.014711094,0.0026192016,0.029608447,0.5710027],"study_design_scores_gemma":[0.00026988168,0.014047718,0.8513801,0.0008619433,0.00013008478,0.0021768177,0.004874654,0.007268612,0.0050669513,0.001677047,0.112200834,0.00004531189],"about_ca_topic_score_codex":0.0058149956,"about_ca_topic_score_gemma":0.0135957515,"teacher_disagreement_score":0.0058149956,"about_ca_system_score_codex":0.0009156164,"about_ca_system_score_gemma":0.00092826545,"threshold_uncertainty_score":0.011562288},"labels":[],"label_agreement":null},{"id":"W1592652206","doi":"10.3138/cbmh.19.2.455","title":"Professions and Intestinal Infections in 15th-Century Florence","year":2002,"lang":"en","type":"article","venue":"Canadian Journal of Health History","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Plague (disease); Residence; History; Demography; Medicine; Ancient history; Gerontology; Sociology","score_opus":0.035730658128911554,"score_gpt":0.2807225955704427,"score_spread":0.24499193744153117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1592652206","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99721575,0.00080332503,0.000007052934,0.00012996719,0.0000061758437,0.0000030057322,0.000054807402,7.7426347e-7,0.0017790687],"genre_scores_gemma":[0.99834645,0.00038283737,0.000023132325,0.000025104946,0.000012452502,0.0000026513587,0.000046736066,4.816351e-7,0.0011601398],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99958056,0.000052215793,0.000016946637,0.000039578666,0.000071707225,0.00023904708],"domain_scores_gemma":[0.99943095,0.00006540652,0.00023942423,0.000015415602,0.000059947575,0.00018881673],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003432686,0.00018920634,0.00025874987,0.002951528,0.0021425823,0.0011184157,0.00035118122,0.0005089197,0.006846002],"category_scores_gemma":[0.0012349596,0.00014582516,0.000168724,0.0016156827,0.0011883735,0.0003772583,0.0010090854,0.0003848728,0.00032670697],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002121834,0.00009575135,0.9602168,0.000060465572,0.000012169889,0.0017389897,0.023956895,0.000024792787,0.00063300005,0.0006664144,0.00038798997,0.011994476],"study_design_scores_gemma":[0.000002075644,0.000043786287,0.9912252,0.00001720793,0.0000027689016,0.00038578577,0.0065333224,0.00000790917,0.000031795138,0.000027676888,0.0017191627,0.000003326696],"about_ca_topic_score_codex":0.17349057,"about_ca_topic_score_gemma":0.33827826,"teacher_disagreement_score":0.17349057,"about_ca_system_score_codex":0.0027863176,"about_ca_system_score_gemma":0.0012659241,"threshold_uncertainty_score":0.34496152},"labels":[],"label_agreement":null},{"id":"W1595263455","doi":"10.1111/mve.12051","title":"High phylogenetic diversity of the cat flea ( <i>Ctenocephalides felis</i> ) at two mitochondrial <scp>DNA</scp> markers","year":2014,"lang":"en","type":"article","venue":"Medical and Veterinary Entomology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":103,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"McMaster University; Johns Hopkins University","keywords":"Felis; Biology; Subspecies; Ctenocephalides; Paraphyly; Zoology; Phylogenetic tree; Nucleotide diversity; Clade; Genetics; Gene; Genotype; CATS; Haplotype","score_opus":0.012337691184761789,"score_gpt":0.25859856639417395,"score_spread":0.24626087520941214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1595263455","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993187,0.00007811812,0.00014558813,0.0000085856245,6.9760677e-7,0.0000041530243,0.00009695135,0.0000023799441,0.0003447432],"genre_scores_gemma":[0.99929094,0.00003160655,0.000243681,0.000010328366,0.0000012358777,0.0000036270399,0.00028214327,0.0000013376031,0.00013505454],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997812,0.000029531888,0.000014808526,0.00008684583,0.000048191858,0.00003947863],"domain_scores_gemma":[0.99965227,0.000056299057,0.00013455561,0.00002104605,0.000067149376,0.00006876453],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020215102,0.00017031468,0.00020126383,0.0009653548,0.00038371078,0.0003834835,0.000108254375,0.00030918437,0.00089132204],"category_scores_gemma":[0.0003921898,0.00010579676,0.00017615358,0.0005865432,0.00036096873,0.00018792693,0.00028318053,0.000259967,0.00017404112],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022007698,0.000063365726,0.61817056,0.00008467974,0.0001427789,0.00026495638,0.0015657396,0.00019882336,0.36872607,0.00011600206,0.00009833914,0.010348646],"study_design_scores_gemma":[0.0000016637342,0.000052618358,0.9965006,0.000005687814,0.000016871749,0.00032702016,0.00014941904,0.00022084979,0.002388501,0.00001645811,0.00031647886,0.0000037244365],"about_ca_topic_score_codex":0.0048192497,"about_ca_topic_score_gemma":0.0076430673,"teacher_disagreement_score":0.0048192497,"about_ca_system_score_codex":0.00026864005,"about_ca_system_score_gemma":0.00013986994,"threshold_uncertainty_score":0.0095824},"labels":[],"label_agreement":null},{"id":"W1605553493","doi":"10.1111/1750-3841.12436","title":"Loop‐Mediated Isothermal Amplification Assays for Detecting <i>Yersinia pseudotuberculosis</i> in Milk Powders","year":2014,"lang":"en","type":"article","venue":"Journal of Food Science","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Ministry of Science and Technology of the People's Republic of China","keywords":"Loop-mediated isothermal amplification; Yersinia pseudotuberculosis; Corynebacterium pseudotuberculosis; Microbiology; Yersinia enterocolitica; Polymerase chain reaction; Detection limit; genomic DNA; Biology; Bacteria; Chemistry; Molecular biology; DNA; Gene; Chromatography; Genetics","score_opus":0.016348664614635976,"score_gpt":0.2869169274109436,"score_spread":0.27056826279630763,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1605553493","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85339946,0.004845178,0.13578612,0.00034178642,0.0001176959,0.00035185524,0.0009992127,0.0014278943,0.0027308294],"genre_scores_gemma":[0.88219744,0.0018905125,0.111543536,0.0001376531,0.000047598278,0.0003210368,0.001405703,0.00007306317,0.002383413],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99900526,0.00026594923,0.000069661495,0.00015639837,0.0004053324,0.000097412434],"domain_scores_gemma":[0.9994011,0.00017373123,0.00017725948,0.000040105813,0.0001752749,0.000032485426],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007961182,0.00060655246,0.00036711714,0.0006423175,0.0002121354,0.00039791086,0.000667581,0.00063340965,0.0007306729],"category_scores_gemma":[0.001277012,0.00028574315,0.00042060268,0.00036292223,0.00034052366,0.0003525174,0.00036992464,0.00055772986,0.00053101266],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011316972,0.000055342884,0.0017476069,0.00011654562,0.000007078324,0.00003607445,0.00004443144,0.0002401412,0.9909616,0.00004796699,0.00009677622,0.0065332297],"study_design_scores_gemma":[0.000010207579,0.00028476916,0.0027961156,0.000015132856,0.000025282607,0.00021388641,0.000035403697,0.0027754782,0.99277276,0.000037186142,0.0010233667,0.000010340942],"about_ca_topic_score_codex":0.00048590094,"about_ca_topic_score_gemma":0.000537625,"teacher_disagreement_score":0.0007961182,"about_ca_system_score_codex":0.0003358518,"about_ca_system_score_gemma":0.0003099875,"threshold_uncertainty_score":0.004210353},"labels":[],"label_agreement":null},{"id":"W1625061646","doi":"10.3138/cbmh.25.2.461","title":"La Peste noire dans l’Occident chrétien et musulman, 1347–1353","year":2008,"lang":"fr","type":"article","venue":"Canadian Journal of Health History","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Humanities; Political science; Geography; Art","score_opus":0.034727036407756505,"score_gpt":0.2830999684283618,"score_spread":0.2483729320206053,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1625061646","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.54283553,0.2285584,0.0012236059,0.04774415,0.005187182,0.0000714298,0.0004444268,0.00007133682,0.17386395],"genre_scores_gemma":[0.82357794,0.06417585,0.0015201553,0.0026995204,0.0025088629,0.000031616593,0.00021234022,0.000032968866,0.10524083],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996247,0.00009586233,0.000012146776,0.000053975502,0.00012151312,0.00009169615],"domain_scores_gemma":[0.999845,0.000050641163,0.000032598196,0.0000055953687,0.000035418936,0.000030754876],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053656165,0.00050432415,0.0002392421,0.0007684566,0.0016152521,0.0013239924,0.00027861845,0.0011958497,0.0058674687],"category_scores_gemma":[0.0009054332,0.00025039222,0.00019422092,0.00052733085,0.0015105214,0.00069778704,0.00043185294,0.0011474917,0.00065180194],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024177344,0.00060473575,0.18977843,0.0014255508,0.00028969612,0.041482642,0.031969924,0.0013056836,0.038904764,0.13780577,0.08957642,0.46443865],"study_design_scores_gemma":[0.000040042178,0.00020289244,0.12419159,0.0002771355,0.000030412757,0.008992268,0.0040555913,0.00031269694,0.0032726137,0.0019614787,0.85660887,0.000054377022],"about_ca_topic_score_codex":0.1771626,"about_ca_topic_score_gemma":0.16211517,"teacher_disagreement_score":0.1771626,"about_ca_system_score_codex":0.0029207906,"about_ca_system_score_gemma":0.002881036,"threshold_uncertainty_score":0.3522628},"labels":[],"label_agreement":null},{"id":"W167946898","doi":"10.4315/0362-028x-73.1.18","title":"Development of Multitarget Real-Time PCR for the Rapid, Specific, and Sensitive Detection of Yersinia pestis in Milk and Ground Beef","year":2010,"lang":"en","type":"article","venue":"Journal of Food Protection","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"Canadian Food Inspection Agency","keywords":"Yersinia pestis; Biology; Primer (cosmetics); TaqMan; Virulence; Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Yersinia enterocolitica; Plasmid; Microbiology; Polymerase chain reaction; Hybridization probe; Real-time polymerase chain reaction; Detection limit; Molecular probe; Bacteria; Gene; Chemistry; Chromatography; Genetics; Escherichia coli","score_opus":0.017567481355226237,"score_gpt":0.2555335181144623,"score_spread":0.23796603675923605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W167946898","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5004786,0.0025350782,0.48994184,0.00058817485,0.00040378675,0.0010663569,0.001480308,0.0013529878,0.0021529617],"genre_scores_gemma":[0.48573226,0.0012404104,0.5000242,0.0005850868,0.000096932104,0.0015150678,0.0033300878,0.00022433752,0.0072517083],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976125,0.00045278296,0.00016344675,0.00084539707,0.00070925686,0.0002167332],"domain_scores_gemma":[0.9986551,0.00068126415,0.00015277561,0.00013577082,0.00026621172,0.000108983026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028335627,0.0011432999,0.0009672831,0.0011138614,0.0004743867,0.0008430981,0.0012542516,0.0009952551,0.001817073],"category_scores_gemma":[0.0018366012,0.0012457998,0.00088827877,0.00034485417,0.0008582727,0.0008816238,0.0006015658,0.0016901635,0.0007372037],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015033886,0.00006655988,0.00030275068,0.000058518814,0.00001176566,0.000028518787,0.000044627075,0.00024040948,0.9931223,0.00015360989,0.000062174906,0.005758559],"study_design_scores_gemma":[0.000062029736,0.0011708072,0.002790058,0.000030846182,0.00006842886,0.0003897596,0.00005448989,0.010566104,0.98177564,0.00019225126,0.002871172,0.000028368477],"about_ca_topic_score_codex":0.00052874896,"about_ca_topic_score_gemma":0.0013877235,"teacher_disagreement_score":0.0028335627,"about_ca_system_score_codex":0.0006660193,"about_ca_system_score_gemma":0.0007552605,"threshold_uncertainty_score":0.014985502},"labels":[],"label_agreement":null},{"id":"W1679499777","doi":"","title":"Investigation on the kinds of flies in earthquake-hit areas of Longnan area.","year":2009,"lang":"en","type":"article","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Anthomyiidae; Muscidae; Calliphoridae; Biology; Zoology; Genus; Forensic entomology; Ecology; Larva","score_opus":0.03461902650877019,"score_gpt":0.26566918782043253,"score_spread":0.23105016131166234,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1679499777","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995189,0.00009767839,0.000024836012,0.000012098878,0.0000013992251,0.00000306512,0.00005763179,6.353375e-7,0.00028384762],"genre_scores_gemma":[0.9991602,0.00009865291,0.00007193069,0.000009946283,0.0000020608047,0.0000034294753,0.00015043863,3.4569152e-7,0.00050308596],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99992526,0.000008906193,0.000006961545,0.000015200395,0.000016215632,0.000027519636],"domain_scores_gemma":[0.9997745,0.000013389697,0.00010176514,0.000007888162,0.00004859582,0.00005380165],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000979307,0.00016030444,0.00010121619,0.00038654695,0.00034642528,0.00019112637,0.0001355297,0.00011864319,0.0010113178],"category_scores_gemma":[0.00021504844,0.0000838017,0.000067905064,0.0003142258,0.0002196118,0.00022762362,0.00024126154,0.000086950866,0.00011010563],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033224147,0.000013369726,0.9924672,0.000031436197,0.000008093333,0.00039104983,0.00094585615,0.000036239548,0.0028425385,0.000026057374,0.00008271804,0.0031221574],"study_design_scores_gemma":[6.956053e-7,0.00003106543,0.9970657,0.0000036165445,0.0000034461852,0.00024438673,0.002198778,0.000039749168,0.00010308882,0.0000074051923,0.00030047842,0.0000016320191],"about_ca_topic_score_codex":0.023416491,"about_ca_topic_score_gemma":0.08484323,"teacher_disagreement_score":0.023416491,"about_ca_system_score_codex":0.0003801077,"about_ca_system_score_gemma":0.00028556612,"threshold_uncertainty_score":0.046560407},"labels":[],"label_agreement":null},{"id":"W171921215","doi":"","title":"Zooarqueología de los perros (Canis lupus familiaris L.) en Canadá","year":2009,"lang":"es","type":"article","venue":"Archaeobios","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Canis; Geography; Archaeology; Archipelago; Prehistory; Homo sapiens; Ethnology; History; Biology; Ecology","score_opus":0.005791572495483433,"score_gpt":0.28455581599294255,"score_spread":0.2787642434974591,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W171921215","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98901737,0.0022101004,0.00013161045,0.00024201538,0.000012420769,0.000021053635,0.00043458198,0.000010435622,0.007920573],"genre_scores_gemma":[0.99009776,0.0034809567,0.0004384187,0.00013337482,0.000010237975,0.000007154303,0.00038632724,0.000003829744,0.00544188],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99977034,0.000018366496,0.00000858862,0.00003820164,0.000075099015,0.000089406254],"domain_scores_gemma":[0.99959975,0.000026293716,0.00007109859,0.00000781677,0.00021045396,0.00008460029],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025528372,0.00017470134,0.00015799646,0.0016244511,0.0024115993,0.000826844,0.00028956006,0.00022408686,0.0016776051],"category_scores_gemma":[0.0004129961,0.0001609853,0.000086809356,0.0023006487,0.0008665427,0.00027415628,0.00034458173,0.00031377556,0.00016084],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030409085,0.00021011304,0.8610073,0.00033549848,0.00004908772,0.0052556796,0.030377943,0.00027297484,0.01748281,0.0013815366,0.003965268,0.07935772],"study_design_scores_gemma":[0.0000050062013,0.00005873366,0.96666974,0.00005788068,0.00002033187,0.0015374739,0.018465512,0.00014015149,0.0008463276,0.000060750943,0.012122487,0.000015652506],"about_ca_topic_score_codex":0.96993446,"about_ca_topic_score_gemma":0.993095,"teacher_disagreement_score":0.030065536,"about_ca_system_score_codex":0.008697707,"about_ca_system_score_gemma":0.006688348,"threshold_uncertainty_score":0.06310654},"labels":[],"label_agreement":null},{"id":"W1723068","doi":"10.1128/jcm.29.11.2368-2374.1991","title":"急成長企業の破綻と復活(その1) : アージェンティの所説から見る永大産業のケース","year":2006,"lang":"en","type":"article","venue":"福岡大学商学論叢","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Computer science","score_opus":0.004749949200884051,"score_gpt":0.2456648026235235,"score_spread":0.24091485342263944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1723068","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918298,0.0010998144,0.002829437,0.00013571308,0.00003587403,0.000057996258,0.00038966732,0.000027972637,0.0035937724],"genre_scores_gemma":[0.9887847,0.0009057598,0.004885651,0.00011786534,0.000025961428,0.000033162483,0.00093256996,0.000008088466,0.0043063997],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998758,0.000013120793,0.000011320974,0.000036676112,0.000028789635,0.000034246164],"domain_scores_gemma":[0.9999074,0.00001006919,0.000033887558,0.0000073262536,0.00002580701,0.000015514412],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015505317,0.00017519144,0.00011285332,0.00013718512,0.00018376758,0.00039609685,0.00008258839,0.00021493241,0.0026031358],"category_scores_gemma":[0.00021352606,0.000082511244,0.00015531716,0.00021651019,0.0002679803,0.00011575178,0.00016164024,0.00021417734,0.0011702524],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008867986,0.00017935886,0.16525634,0.0002666866,0.00006464078,0.0009546481,0.00057258486,0.00037837497,0.74039686,0.0007337488,0.0012598927,0.089050226],"study_design_scores_gemma":[0.000051799485,0.0015189364,0.6741234,0.00008396099,0.0001289083,0.003749618,0.0008958786,0.0008842945,0.2851533,0.0005078231,0.032873455,0.000028611108],"about_ca_topic_score_codex":0.0017732481,"about_ca_topic_score_gemma":0.0017352954,"teacher_disagreement_score":0.0026031358,"about_ca_system_score_codex":0.0002513938,"about_ca_system_score_gemma":0.00021498918,"threshold_uncertainty_score":0.008708358},"labels":[],"label_agreement":null},{"id":"W1752050807","doi":"","title":"Arthropods that attack man and domestic animals in British Columbia (1951 - 2001)","year":2001,"lang":"en","type":"article","venue":"Biodiversity Heritage Library (Smithsonian Institution)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Government of British Columbia; Simon Fraser University","funders":"","keywords":"Tick; Entomology; Geography; Plague (disease); Dominion; Ecology; Zoology; Archaeology; Biology","score_opus":0.021186723766506207,"score_gpt":0.24653601756990703,"score_spread":0.22534929380340082,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1752050807","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9012227,0.025297858,0.00029792677,0.0018658945,0.00021439182,0.00018610775,0.021205375,0.000073197705,0.04963652],"genre_scores_gemma":[0.93687946,0.013899006,0.0004644787,0.00077092234,0.000055395038,0.000050374736,0.0074147363,0.000015300582,0.040450312],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997454,0.0000110245255,0.000013862897,0.000032236963,0.0001022867,0.000095200856],"domain_scores_gemma":[0.99970835,0.00001088101,0.00006245909,0.000010001368,0.00012271643,0.00008552588],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018366965,0.00038853197,0.00017779939,0.0018891664,0.002469976,0.00074392435,0.00048038835,0.00043140198,0.0063356156],"category_scores_gemma":[0.000468703,0.0003156544,0.00014186122,0.002899184,0.00037337787,0.00042877297,0.00056857534,0.0006221552,0.0010771787],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017948885,0.00011479872,0.78749746,0.00062096247,0.00008512562,0.0021135397,0.0048614633,0.00019047015,0.0016951044,0.00045293968,0.041454688,0.16073401],"study_design_scores_gemma":[0.0000034132513,0.0000146854545,0.9705759,0.00008228611,0.000012372232,0.00032583295,0.0010401558,0.000053217813,0.00008247231,0.000017516899,0.027786512,0.000005642778],"about_ca_topic_score_codex":0.9461869,"about_ca_topic_score_gemma":0.9893618,"teacher_disagreement_score":0.9461869,"about_ca_system_score_codex":0.0061717085,"about_ca_system_score_gemma":0.0034389307,"threshold_uncertainty_score":0.108259976},"labels":[],"label_agreement":null},{"id":"W17584986","doi":"10.1196/annals.1402.005","title":"Echidnophaga gallinacea (Siphonaptera: Pulicidae) recorded in Canada for the first time.","year":2000,"lang":"en","type":"article","venue":"Annals of the New York Academy of Sciences","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institute on Deafness and Other Communication Disorders","keywords":"Flea; Geography; Marsh; Ecology; Zoology; Biology; Wetland","score_opus":0.04350919588850691,"score_gpt":0.30882315402874666,"score_spread":0.2653139581402397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W17584986","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94808835,0.008406527,0.001870738,0.00021663286,0.00011253393,0.00007459847,0.0051657534,0.00021700174,0.035847824],"genre_scores_gemma":[0.9784348,0.0017421828,0.0021052144,0.0001993773,0.000008737633,0.00001634595,0.0031338257,0.00002161492,0.014337878],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99986875,0.000003982153,0.0000053361805,0.00003499507,0.000038008537,0.00004888843],"domain_scores_gemma":[0.99982834,0.000008755134,0.00002479104,0.000014948864,0.00008535687,0.000037818336],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006671309,0.00035248246,0.00030919703,0.0011096632,0.0015459572,0.00050096196,0.00027606604,0.000313632,0.0027910462],"category_scores_gemma":[0.0002326722,0.00009787412,0.00016070725,0.0013558315,0.00034262778,0.00025862755,0.0004257129,0.00030686473,0.00089191296],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005969075,0.00005870089,0.46894887,0.00070049474,0.00019496182,0.004901903,0.00610706,0.000496539,0.28196147,0.0013199345,0.0058656964,0.22884753],"study_design_scores_gemma":[0.000008170483,0.00005308698,0.9117699,0.00005681156,0.000058367958,0.0020655391,0.0025548365,0.00017395896,0.0059063635,0.00011329564,0.07721793,0.000021799697],"about_ca_topic_score_codex":0.5510334,"about_ca_topic_score_gemma":0.80002344,"teacher_disagreement_score":0.44896662,"about_ca_system_score_codex":0.002883977,"about_ca_system_score_gemma":0.0020199327,"threshold_uncertainty_score":0.90322137},"labels":[],"label_agreement":null},{"id":"W17687938","doi":"","title":"Analyzing Epidemics in New France: The Measles Epidemic of 1714-15","year":2011,"lang":"en","type":"article","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Measles; Virology; Geography; Vaccination; Medicine","score_opus":0.04128353187904775,"score_gpt":0.2985896470137523,"score_spread":0.2573061151347045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W17687938","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9919778,0.0008432698,0.0003131783,0.0004859828,0.00004215531,0.00004979621,0.00303872,0.000035066427,0.0032140734],"genre_scores_gemma":[0.9924482,0.00055765314,0.0007051498,0.0001547788,0.00007067534,0.00003643131,0.0036548148,0.000009670935,0.0023627265],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996556,0.00006939351,0.000017455603,0.000044403205,0.000088610934,0.00012458366],"domain_scores_gemma":[0.9993529,0.000071338276,0.00019697676,0.0000266965,0.00017854916,0.00017356021],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005987461,0.00022965993,0.00023107443,0.002135905,0.0004550992,0.00083391136,0.00034989777,0.00062245916,0.0015344556],"category_scores_gemma":[0.0008101102,0.000098466786,0.0002934895,0.0014966597,0.00025523143,0.0003849952,0.00061139243,0.00048408043,0.00021513025],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020953178,0.000093604256,0.9800163,0.00006257179,0.00011573893,0.0014857072,0.0008082616,0.00061192975,0.0015604431,0.00033240247,0.0023188242,0.012384779],"study_design_scores_gemma":[0.0000049307323,0.000053837768,0.995135,0.00000742953,0.000009460044,0.0002456892,0.00074544235,0.00036922545,0.00012233132,0.000024692486,0.0032737544,0.000008116923],"about_ca_topic_score_codex":0.27460852,"about_ca_topic_score_gemma":0.30253872,"teacher_disagreement_score":0.7253915,"about_ca_system_score_codex":0.0039720773,"about_ca_system_score_gemma":0.0016799874,"threshold_uncertainty_score":0.54602027},"labels":[],"label_agreement":null},{"id":"W1802237468","doi":"10.1099/0022-1317-50-12-1030","title":"Interaction of Yersinia enterocolitica and Y. pseudotuberculosis with platelets","year":2001,"lang":"en","type":"article","venue":"Journal of Medical Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Yersinia enterocolitica; Yersinia pseudotuberculosis; Microbiology; Platelet; Biology; Yersinia; Virulence; Plasmid; Flow cytometry; Bacteria; Enterobacteriaceae; Molecular biology; Escherichia coli; Gene; Immunology; Genetics","score_opus":0.008939203598629911,"score_gpt":0.2869340493964586,"score_spread":0.2779948457978287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1802237468","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99616677,0.0012749764,0.00083681365,0.00014453226,0.000031692467,0.000022341583,0.00023919593,0.000015156465,0.0012685314],"genre_scores_gemma":[0.9945891,0.0008280344,0.0016214687,0.00010092306,0.0000179188,0.00003805215,0.00069759815,0.000010019857,0.002096764],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996357,0.000101656624,0.000029479279,0.000038261933,0.00008533066,0.00010957833],"domain_scores_gemma":[0.999864,0.000036966467,0.000034514185,0.000014591067,0.000029880879,0.000019918743],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017080388,0.00032523173,0.000310324,0.00012628791,0.00016382203,0.0004231054,0.00019424631,0.00042822174,0.0009876451],"category_scores_gemma":[0.00031177708,0.00015245649,0.0003291395,0.00020824495,0.00012567297,0.00018560585,0.0004118098,0.00043021125,0.00028674444],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028314404,0.000044407105,0.0018850032,0.0000804269,0.000016117274,0.0002759374,0.00005728589,0.00010896943,0.99573946,0.0000781839,0.00013330387,0.0012977677],"study_design_scores_gemma":[0.00005012609,0.0020628406,0.06499194,0.00004647051,0.00005410147,0.0020834298,0.00044493045,0.0021106137,0.92163485,0.00011280371,0.0063790414,0.00002891982],"about_ca_topic_score_codex":0.0011229364,"about_ca_topic_score_gemma":0.00079595816,"teacher_disagreement_score":0.0011229364,"about_ca_system_score_codex":0.00018753707,"about_ca_system_score_gemma":0.00018681568,"threshold_uncertainty_score":0.0033040047},"labels":[],"label_agreement":null},{"id":"W1804518029","doi":"","title":"New State Records for the Flea, Foxella ignota (Siphonaptera: Ceratophyllidae) from Oklahoma and Sucking Louse, Hoplopleura sciuiricola (Phthiraptera: Hoplopleuridae), from Iowa and Oklahoma","year":2015,"lang":"en","type":"article","venue":"Proceedings of the Oklahoma Academy of Science","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Flea; Louse; Geography; Archaeology; Sciurus; Ecology; Biology; Habitat","score_opus":0.02840901077169798,"score_gpt":0.28016543857068654,"score_spread":0.25175642779898855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1804518029","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938393,0.0003361802,0.00036564312,0.00007433672,0.000014718859,0.000022009986,0.0016728889,0.000019203255,0.0036558283],"genre_scores_gemma":[0.99026334,0.0006812313,0.0016108463,0.000109949884,0.000018524235,0.00006556384,0.004403544,0.0000074812274,0.0028394943],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999908,0.000009486273,0.000013474973,0.00002727575,0.000021870746,0.000019988258],"domain_scores_gemma":[0.9991417,0.00008665208,0.00040135262,0.00007079976,0.00018539466,0.00011396611],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018081849,0.00016385577,0.00011574902,0.0012995203,0.0009592331,0.00037471508,0.00024182555,0.00021520596,0.0016642727],"category_scores_gemma":[0.00042106,0.00020619645,0.00010273311,0.0007554182,0.00027959587,0.00037305977,0.0006082388,0.0004129392,0.00024592222],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000086942164,0.0000574417,0.9563303,0.00010008318,0.000034694098,0.0004465868,0.0038510012,0.0000621254,0.009279011,0.00009459171,0.0019950438,0.027662165],"study_design_scores_gemma":[0.000003415836,0.000034624038,0.9897083,0.0000339084,0.000030700747,0.0004284245,0.001917938,0.00006508994,0.00055526255,0.000018700726,0.0071966005,0.000007108773],"about_ca_topic_score_codex":0.07270512,"about_ca_topic_score_gemma":0.45703083,"teacher_disagreement_score":0.07270512,"about_ca_system_score_codex":0.0005734876,"about_ca_system_score_gemma":0.00066542067,"threshold_uncertainty_score":0.14456385},"labels":[],"label_agreement":null},{"id":"W1885321626","doi":"","title":"Host specificity, prevalence and intensity of infestation of fleas (Order Siphonaptera) of small mammals atselected sites in the city of Windhoek, Namibia.","year":2013,"lang":"en","type":"article","venue":"International Science and Technology Journal of Namibia","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Xenopsylla; Flea; Biology; Zoology; Host (biology); Rodent; Infestation; Ecology; Botany","score_opus":0.013734463349160748,"score_gpt":0.2756219261260486,"score_spread":0.26188746277688785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1885321626","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996432,0.000038620616,0.000011992244,0.000008024757,5.705878e-7,0.0000036242097,0.0001498634,5.93545e-7,0.00014352392],"genre_scores_gemma":[0.9993749,0.000058605387,0.000074252916,0.0000088347,0.0000011289709,0.000007987265,0.00020882061,3.735177e-7,0.0002651434],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9999262,0.0000150218575,0.000009177442,0.000015684687,0.000011229874,0.0000227327],"domain_scores_gemma":[0.9997545,0.000021333897,0.0001399663,0.000008457977,0.000025739066,0.000050073908],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012596091,0.00019822577,0.00009760356,0.0005027338,0.00040069374,0.00021439411,0.0001645627,0.00018099151,0.001052382],"category_scores_gemma":[0.00035787703,0.00019429167,0.000095364434,0.00041751988,0.00021316642,0.00024184931,0.00024570213,0.00012707648,0.00013774366],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054578195,0.00002250022,0.9940487,0.000020872923,0.000015179395,0.00028389544,0.0010234326,0.000016480251,0.0025818376,0.000010038471,0.00007299094,0.001849489],"study_design_scores_gemma":[6.6076103e-7,0.000021491147,0.99911267,0.000002172517,0.0000028488569,0.000140743,0.0005579619,0.000019630023,0.000064626394,0.0000015711635,0.000074687254,9.0910464e-7],"about_ca_topic_score_codex":0.04051109,"about_ca_topic_score_gemma":0.17711037,"teacher_disagreement_score":0.04051109,"about_ca_system_score_codex":0.0006396134,"about_ca_system_score_gemma":0.00022066335,"threshold_uncertainty_score":0.08055061},"labels":[],"label_agreement":null},{"id":"W1898863751","doi":"","title":"Le quiproquo de la gigue au Québec","year":2004,"lang":"fr","type":"article","venue":"Canadian Folk Music / Musique folklorique canadienne","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Political science","score_opus":0.008657591353155648,"score_gpt":0.22791203401578214,"score_spread":0.2192544426626265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1898863751","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35868937,0.029912032,0.0043437737,0.054192487,0.009005369,0.00046552697,0.01981458,0.0009326549,0.5226442],"genre_scores_gemma":[0.21027663,0.0037110907,0.0012333536,0.0026309285,0.00021377031,0.00008238742,0.0016675484,0.00008573876,0.78009856],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.999627,0.000037602946,0.000009887014,0.000051941573,0.00010997856,0.00016354861],"domain_scores_gemma":[0.99943584,0.000047470086,0.000031018702,0.000019420859,0.00026527845,0.00020099957],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003220147,0.00048534872,0.0003848398,0.00066591427,0.005481434,0.0022015078,0.0004622529,0.0010768197,0.04986125],"category_scores_gemma":[0.0007937461,0.00023290857,0.00041030077,0.0010392324,0.0006738494,0.00056588213,0.00068088394,0.0020382283,0.0027878257],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013919321,0.00034519003,0.10890252,0.0007659764,0.000320997,0.0066925264,0.0043781777,0.0036098035,0.0082573015,0.068482645,0.47116852,0.32568446],"study_design_scores_gemma":[0.0000851041,0.00007494097,0.113441594,0.00016209665,0.000024036966,0.00033694683,0.0021098556,0.00076822075,0.00081187184,0.000625152,0.8815179,0.00004225331],"about_ca_topic_score_codex":0.98463446,"about_ca_topic_score_gemma":0.9944786,"teacher_disagreement_score":0.04986125,"about_ca_system_score_codex":0.030680656,"about_ca_system_score_gemma":0.029699264,"threshold_uncertainty_score":0.22260481},"labels":[],"label_agreement":null},{"id":"W1907982143","doi":"10.1007/s11626-007-9060-2","title":"Species identification in cell culture: a two-pronged molecular approach","year":2007,"lang":"en","type":"article","venue":"In Vitro Cellular & Developmental Biology - Animal","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":170,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Canada","keywords":"Computational biology; Biology; Contamination; Genome; Identification (biology); Multiplex; Barcode; Primer (cosmetics); Genetics; Gene; Chemistry; Ecology; Computer science","score_opus":0.013173836750278507,"score_gpt":0.26977433167724696,"score_spread":0.25660049492696846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1907982143","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.25721705,0.0064494004,0.69991165,0.0020094092,0.0012906208,0.0029438995,0.004072694,0.001382505,0.024722707],"genre_scores_gemma":[0.3741929,0.009186153,0.5464072,0.0015043474,0.00033050997,0.0021194608,0.009350563,0.0006717254,0.056237154],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992157,0.00013447531,0.00011200975,0.00017787972,0.00023524411,0.00012468487],"domain_scores_gemma":[0.9990017,0.00044560942,0.000059728645,0.00025170165,0.0001674328,0.000073782954],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009823111,0.00073274213,0.0011449896,0.0010092787,0.0008765115,0.0017548074,0.00094436394,0.0011272534,0.0033920687],"category_scores_gemma":[0.00060405413,0.0007167257,0.0008574104,0.00044115365,0.0007379938,0.0012038781,0.002614097,0.002561441,0.0055964524],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003108117,0.000023867784,0.000100149984,0.000043712418,0.0000039505926,0.00004925295,0.00003360887,0.00002865954,0.9966485,0.000370125,0.000094830684,0.0025722387],"study_design_scores_gemma":[0.000024978597,0.00022178776,0.0017892031,0.000021171301,0.00005524921,0.0008273077,0.000106067106,0.0017316028,0.9716072,0.00050686934,0.023081476,0.000026962316],"about_ca_topic_score_codex":0.0007165663,"about_ca_topic_score_gemma":0.0025277862,"teacher_disagreement_score":0.0033920687,"about_ca_system_score_codex":0.00043330013,"about_ca_system_score_gemma":0.00062365097,"threshold_uncertainty_score":0.011347592},"labels":[],"label_agreement":null},{"id":"W1937257177","doi":"10.1111/j.1863-2378.2009.01271.x","title":"Growth Model of a Plasmid‐Bearing Virulent Strain of <i>Yersinia pseudotuberculosis</i> in Raw Ground Beef","year":2009,"lang":"en","type":"article","venue":"Zoonoses and Public Health","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Public Health Agency of Canada","keywords":"Virulence; Yersinia pseudotuberculosis; Strain (injury); Microbiology; Population; Plasmid; Biology; Veterinary medicine; Food science; Medicine","score_opus":0.03340941857720323,"score_gpt":0.298686785072059,"score_spread":0.2652773664948557,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1937257177","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9888875,0.0002166309,0.009279399,0.00004417304,0.000009588441,0.00002082712,0.00085013715,0.00008279934,0.00060902606],"genre_scores_gemma":[0.9962781,0.00018376786,0.0023602361,0.000007819013,0.0000011954651,0.000028030727,0.0005382495,0.00000775989,0.0005947476],"study_design_codex":"simulation_or_modeling","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988234,0.000018437138,0.000008832276,0.000038186867,0.000029078145,0.000023090004],"domain_scores_gemma":[0.99980265,0.00006345302,0.000049498292,0.000012276658,0.000065235945,0.0000069836574],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023718369,0.00059024466,0.00031500595,0.00024045687,0.00013152538,0.0002854499,0.000414851,0.0004404719,0.0005761826],"category_scores_gemma":[0.0003357569,0.00019441955,0.0006545884,0.00022632407,0.00014943945,0.00015780299,0.0001779734,0.00026503744,0.00020851397],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008258689,0.00014459694,0.01968495,0.0003211017,0.00008562984,0.00032817043,0.0001449837,0.6342236,0.33650294,0.00040530364,0.00029786167,0.0070348945],"study_design_scores_gemma":[0.000018220844,0.0007737902,0.011143593,0.000014449866,0.00005414895,0.0000732673,0.000092492584,0.9065357,0.08066346,0.00012586,0.0004756103,0.000029471681],"about_ca_topic_score_codex":0.030113049,"about_ca_topic_score_gemma":0.011829608,"teacher_disagreement_score":0.030113049,"about_ca_system_score_codex":0.0006106479,"about_ca_system_score_gemma":0.0002896998,"threshold_uncertainty_score":0.059875548},"labels":[],"label_agreement":null},{"id":"W1954870561","doi":"","title":"Coriolis LAVAL, negrier de service !","year":2010,"lang":"en","type":"article","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Service (business); Computer science; Business","score_opus":0.0076123772947916755,"score_gpt":0.27766263982016137,"score_spread":0.2700502625253697,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1954870561","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.022515163,0.03328887,0.0016154108,0.03390547,0.023712935,0.0006085544,0.016469665,0.006076303,0.8618077],"genre_scores_gemma":[0.010826784,0.0023404248,0.00038897552,0.0006627461,0.0005932896,0.000034303113,0.0010859559,0.0004335499,0.98363394],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99856985,0.00014746816,0.000054135046,0.00039306283,0.00042427532,0.00041118296],"domain_scores_gemma":[0.99815196,0.00021041428,0.00014425212,0.00017630418,0.00046923605,0.00084782555],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000870272,0.0024324374,0.0013212193,0.0013457347,0.0029985583,0.0031096572,0.0014656737,0.002970565,0.7660048],"category_scores_gemma":[0.0025563308,0.0005228205,0.0009466887,0.0010720355,0.000882141,0.0011714558,0.0028871489,0.0020756728,0.4491711],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015480929,0.00022931419,0.0041030454,0.0007105208,0.00008696334,0.0020560375,0.00018187084,0.00039222057,0.0074904663,0.004583999,0.7777627,0.2008546],"study_design_scores_gemma":[0.000061866456,0.000107897016,0.007242737,0.00010669053,0.000007529836,0.0005561711,0.00016985432,0.00009159389,0.0006717737,0.0002750899,0.99069124,0.000017519453],"about_ca_topic_score_codex":0.045129746,"about_ca_topic_score_gemma":0.06194294,"teacher_disagreement_score":0.7660048,"about_ca_system_score_codex":0.0027173231,"about_ca_system_score_gemma":0.003042742,"threshold_uncertainty_score":0.33376575},"labels":[],"label_agreement":null},{"id":"W1959186457","doi":"10.1007/s00484-015-1059-x","title":"The effect of temperature on arson incidence in Toronto, Ontario, Canada","year":2015,"lang":"en","type":"article","venue":"International Journal of Biometeorology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University","funders":"","keywords":"Arson; Poison control; Environmental science; Meteorology; Precipitation; Climatology; Geography; Psychology; Medical emergency; Criminology; Medicine; Geology","score_opus":0.006766340464516372,"score_gpt":0.29019016590457347,"score_spread":0.2834238254400571,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1959186457","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9780994,0.0014805904,0.00027998476,0.0010515042,0.00009196562,0.000050222872,0.008802414,0.000054940847,0.010088939],"genre_scores_gemma":[0.98799604,0.00051051,0.00017314915,0.00012931185,0.00001595585,0.000013708195,0.0019037547,0.000017432412,0.009240167],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99935144,0.00007701904,0.000031739106,0.00007843542,0.00019418914,0.00026721336],"domain_scores_gemma":[0.99748695,0.00021187558,0.00031976457,0.00005370855,0.00121124,0.0007164635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036083232,0.0003052037,0.0003261163,0.00080734974,0.0021992286,0.0011114135,0.0010662245,0.00039846715,0.004366692],"category_scores_gemma":[0.0014418612,0.00030220833,0.00050634384,0.0016036136,0.00064074615,0.00026811782,0.0005608684,0.0006680644,0.00045813576],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00091471616,0.00008549839,0.97223186,0.00010763553,0.00020049163,0.000381837,0.0030658096,0.00092744944,0.002234353,0.00040912774,0.00985175,0.0095895035],"study_design_scores_gemma":[0.000006614032,0.000024395666,0.9968637,0.000014087493,0.000015078892,0.000028753206,0.0012368795,0.0001727331,0.00010575652,0.000010653531,0.0015136098,0.000007826333],"about_ca_topic_score_codex":0.99648005,"about_ca_topic_score_gemma":0.999025,"teacher_disagreement_score":0.032209676,"about_ca_system_score_codex":0.032209676,"about_ca_system_score_gemma":0.022771964,"threshold_uncertainty_score":0.23369867},"labels":[],"label_agreement":null},{"id":"W1968674874","doi":"10.1007/s00203-010-0582-8","title":"The UvrY response regulator of the BarA–UvrY two-component system contributes to Yersinia ruckeri infection of rainbow trout (Oncorhynchus mykiss)","year":2010,"lang":"en","type":"article","venue":"Archives of Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Yersinia ruckeri; Rainbow trout; Biology; Mutant; Virulence; Pathogen; Immune system; Microbiology; Gene; Trout; Genetics; Fish <Actinopterygii>; Fishery","score_opus":0.003626607343668271,"score_gpt":0.2384958245844132,"score_spread":0.23486921724074494,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968674874","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985008,0.0002820627,0.00057894335,0.00005431773,0.00001339532,0.000007903895,0.00010950509,0.000033282227,0.0004197367],"genre_scores_gemma":[0.99660206,0.00012928968,0.00062513695,0.000049178845,0.00000771657,0.000016416581,0.0005073388,0.000014115866,0.0020488005],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984527,0.000020504094,0.000011076731,0.000034499848,0.000034043784,0.000054535674],"domain_scores_gemma":[0.9998204,0.000027070591,0.000056422003,0.000020347556,0.00002522376,0.000050579783],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001894842,0.00035330906,0.0002912037,0.00036449172,0.00022852955,0.00044904847,0.00022534735,0.0003607809,0.0012429109],"category_scores_gemma":[0.00019519338,0.00030573754,0.0003533638,0.00009093801,0.0002742266,0.00027920402,0.0004933159,0.0005429061,0.00047142123],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007633516,0.00001217382,0.00067033834,0.0000099442195,0.0000029953535,0.00002871137,0.000011885487,0.000018699173,0.9989748,0.000034353117,0.000013521945,0.00014632184],"study_design_scores_gemma":[0.00004678155,0.00041648172,0.29517007,0.000015632824,0.00006690618,0.0006269225,0.0001912945,0.0038146942,0.6982155,0.00015846822,0.0012583096,0.000018943032],"about_ca_topic_score_codex":0.0018820937,"about_ca_topic_score_gemma":0.0026653023,"teacher_disagreement_score":0.0018820937,"about_ca_system_score_codex":0.0006154414,"about_ca_system_score_gemma":0.00033218693,"threshold_uncertainty_score":0.004465401},"labels":[],"label_agreement":null},{"id":"W1971478041","doi":"10.1139/cjm-2014-0211","title":"Genotyping of<i>Yersinia enterocolitica</i>biotype 1A strains from clinical and nonclinical origins by pulsed-field gel electrophoresis","year":2014,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Universidade de São Paulo; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Pulsed-field gel electrophoresis; XhoI; Biology; Yersinia enterocolitica; Microbiology; Genotyping; Typing; Restriction enzyme; Gel electrophoresis; Ribotyping; Virulence; Genetics; Genotype; Bacteria; Gene; EcoRI","score_opus":0.01088814946750643,"score_gpt":0.2814054236728115,"score_spread":0.2705172742053051,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971478041","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99646866,0.0005797938,0.0011125498,0.000056287205,0.000010668968,0.00008052965,0.0009037064,0.00001627379,0.00077139406],"genre_scores_gemma":[0.9913532,0.00089286297,0.005087884,0.0000604496,0.000010182218,0.000066854,0.001881191,0.000016939457,0.0006303362],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99916625,0.00014626114,0.00015568748,0.00020051328,0.00016793696,0.00016337022],"domain_scores_gemma":[0.9986539,0.0003001874,0.0005442347,0.000073962954,0.00031184976,0.00011578411],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007997272,0.00058930425,0.0005790976,0.0017370493,0.0002663204,0.0007180171,0.00025893326,0.00034842154,0.0007695734],"category_scores_gemma":[0.0017470988,0.00023168552,0.00041669604,0.0014510888,0.0003245825,0.0003227653,0.00033083803,0.00032094354,0.00024856144],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001456125,0.00021374744,0.25815484,0.00057868,0.00010762185,0.0005850107,0.0012461698,0.00023677177,0.71220595,0.000116725736,0.0002043073,0.024894036],"study_design_scores_gemma":[0.000040541854,0.0011037,0.85105145,0.00010547064,0.00019457308,0.0020835095,0.0011595007,0.0005052252,0.14131042,0.000073638155,0.0023353624,0.00003667594],"about_ca_topic_score_codex":0.0059247804,"about_ca_topic_score_gemma":0.004155425,"teacher_disagreement_score":0.0059247804,"about_ca_system_score_codex":0.00038780592,"about_ca_system_score_gemma":0.00038021748,"threshold_uncertainty_score":0.01178062},"labels":[],"label_agreement":null},{"id":"W1971813805","doi":"10.1016/j.bpj.2012.11.2950","title":"Structure-Based Analysis of the Type III Secretion System for Antimicrobial and Vaccine Design","year":2013,"lang":"en","type":"article","venue":"Biophysical Journal","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Secretion; Type three secretion system; Virulence; Biology; Effector; Microbiology; Yersinia; Bacterial outer membrane; Bacteria; Type VI secretion system; Escherichia coli; Pseudomonas aeruginosa; Salmonella; Computational biology; Cell biology; Biochemistry; Genetics; Gene","score_opus":0.010715159121686397,"score_gpt":0.2553905042526875,"score_spread":0.24467534513100112,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971813805","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9664403,0.0015498681,0.027539859,0.00048655696,0.000048949903,0.00006285412,0.00038839303,0.00023027728,0.0032529056],"genre_scores_gemma":[0.9801809,0.0007390355,0.017394694,0.000060148886,0.000008861932,0.000028260718,0.00079606817,0.000028405659,0.0007634736],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9999422,0.000016467015,0.0000042117917,0.00000923087,0.000017944905,0.000009916736],"domain_scores_gemma":[0.9999268,0.000021520786,0.00001396526,0.0000078222065,0.000019943107,0.000010032732],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018131036,0.0003927001,0.0003000643,0.00022540925,0.00034827142,0.00061874645,0.0003603184,0.00041185672,0.0015519231],"category_scores_gemma":[0.0003040307,0.00016545497,0.00046054073,0.00023814087,0.00015171849,0.0002892251,0.00010701699,0.00058833003,0.0003731071],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00060345384,0.00034741688,0.0029076962,0.00022329878,0.000045826702,0.00022922222,0.00007889425,0.061716784,0.90889055,0.010576013,0.0007499064,0.0136308735],"study_design_scores_gemma":[0.00010656943,0.0007827425,0.0050358274,0.00004189201,0.00008561599,0.00023988781,0.0001295168,0.6432445,0.33912063,0.005008876,0.0061738216,0.000030213796],"about_ca_topic_score_codex":0.0010484033,"about_ca_topic_score_gemma":0.0010970095,"teacher_disagreement_score":0.0015519231,"about_ca_system_score_codex":0.0008252957,"about_ca_system_score_gemma":0.0006263601,"threshold_uncertainty_score":0.005988002},"labels":[],"label_agreement":null},{"id":"W1972926850","doi":"10.7202/030823ar","title":"Canadian Doctors and the Cholera","year":2006,"lang":"fr","type":"article","venue":"Historical Papers","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Humanities; Political science; Philosophy","score_opus":0.004914969623805244,"score_gpt":0.2087831595724278,"score_spread":0.20386818994862255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972926850","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02872542,0.0775261,0.0001937142,0.47712904,0.009238935,0.00009158521,0.0011333541,0.00004414148,0.40591773],"genre_scores_gemma":[0.4516224,0.08529727,0.00039073548,0.08929595,0.0034975833,0.00006755632,0.00068956416,0.000084477935,0.36905447],"study_design_codex":"not_applicable","study_design_gemma":"qualitative","domain_scores_codex":[0.99478686,0.0006266509,0.000113898284,0.00025122912,0.0016065474,0.0026148756],"domain_scores_gemma":[0.9917943,0.0010446297,0.00062833424,0.00017323047,0.0023921803,0.0039674146],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002650638,0.00038589045,0.0004672986,0.0025903499,0.018343054,0.007816351,0.0013532883,0.004337015,0.03564623],"category_scores_gemma":[0.008684257,0.00044651944,0.0004879294,0.005926932,0.010432816,0.00167369,0.004105002,0.004276984,0.0016796099],"study_design_candidate":"qualitative","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012041254,0.000053720654,0.015233407,0.00075429137,0.000029993953,0.0011944044,0.022618506,0.00013150088,0.00020519423,0.23477544,0.6589279,0.065955244],"study_design_scores_gemma":[0.000023676808,0.000013134552,0.022632409,0.0005192546,0.000016068774,0.00015998933,0.012303638,0.00002744298,0.00003932957,0.0023987293,0.9618308,0.000035480072],"about_ca_topic_score_codex":0.9868248,"about_ca_topic_score_gemma":0.9932427,"teacher_disagreement_score":0.12607777,"about_ca_system_score_codex":0.12607777,"about_ca_system_score_gemma":0.2055725,"threshold_uncertainty_score":0.91476256},"labels":[],"label_agreement":null},{"id":"W1975651726","doi":"10.4322/rbpv.01901012","title":"AvaliaÇão de diferentes dietas merídicas sobre a emergência de adultos de Ctenocephalides felis felis (Siphonaptera: Pulicidae)","year":2010,"lang":"pt","type":"article","venue":"Revista Brasileira de Parasitologia Veterinária/Brazilian Journal of Veterinary Parasitology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Felis; Biology; Flea; Ctenocephalides; Veterinary medicine; Bran; Animal science; Zoology; Ecology; CATS; Medicine; Internal medicine","score_opus":0.027400563636286603,"score_gpt":0.3512469450161072,"score_spread":0.3238463813798206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975651726","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99956924,0.00017531341,0.000042600026,0.000010328376,0.0000037101922,0.0000057505695,0.000040889507,0.0000013965624,0.00015067773],"genre_scores_gemma":[0.998104,0.00041859408,0.00061263144,0.00003941849,0.000008046569,0.000018417286,0.00013991645,0.0000023662556,0.00065654394],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988925,0.000024978948,0.000008521887,0.000034584384,0.000023113938,0.0000195377],"domain_scores_gemma":[0.99968696,0.00008023414,0.00009848828,0.000014143865,0.000041626434,0.00007867604],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023126995,0.00023877858,0.00028864387,0.00016535893,0.00017067234,0.00035495844,0.000099761506,0.00022062361,0.00074574543],"category_scores_gemma":[0.000368723,0.00010992541,0.00013652442,0.000108441185,0.0002179156,0.00022893038,0.00011811884,0.00027145026,0.00008070093],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0077637313,0.0010911309,0.026593316,0.00032002246,0.00006363566,0.000117941185,0.000295712,0.00011884412,0.9483515,0.00006223397,0.00006819484,0.0151536865],"study_design_scores_gemma":[0.00018066965,0.049410526,0.61593467,0.000060342536,0.00031637712,0.00029151095,0.0008913564,0.0006147671,0.32831123,0.00012539256,0.0038312403,0.00003183922],"about_ca_topic_score_codex":0.00083541306,"about_ca_topic_score_gemma":0.0030021444,"teacher_disagreement_score":0.00083541306,"about_ca_system_score_codex":0.0002051336,"about_ca_system_score_gemma":0.00018504269,"threshold_uncertainty_score":0.0024947524},"labels":[],"label_agreement":null},{"id":"W1977214846","doi":"10.1139/w09-060","title":"A refrigeration temperature of 4 °C does not prevent static growth of <i>Yersinia pestis</i> in heart infusion broth","year":2009,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Yersinia pestis; Doubling time; Microbiology; Food science; Bacterial growth; Refrigeration; Strain (injury); Biology; Pathogen; Bacteria; Virulence; In vitro; Biochemistry; Genetics","score_opus":0.005420461674389494,"score_gpt":0.23806502846726338,"score_spread":0.23264456679287387,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977214846","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99622935,0.00077149755,0.0013967765,0.000106338084,0.000024947638,0.00001835472,0.00027958595,0.00005320493,0.0011199501],"genre_scores_gemma":[0.99381703,0.0005291177,0.0034697508,0.00007280828,0.000021917414,0.000026265454,0.0009114911,0.000039581777,0.001112013],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999637,0.0000682596,0.00005529144,0.000055771827,0.00010452412,0.00007913134],"domain_scores_gemma":[0.99951196,0.00010618824,0.00017906992,0.000060397124,0.00009535062,0.00004703504],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027421612,0.00042095126,0.0004143114,0.00014648937,0.00018129774,0.0005198457,0.0003129495,0.00020035724,0.0009842432],"category_scores_gemma":[0.00053352065,0.00015002913,0.00028171425,0.00017269321,0.00022914636,0.00032933097,0.00034890632,0.00026814186,0.0004361689],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032714297,0.00004189407,0.0042420393,0.00008515806,0.000017368344,0.00007906681,0.000056555833,0.000093219554,0.9919624,0.000025837644,0.00011223222,0.0029569971],"study_design_scores_gemma":[0.000011757629,0.0013932497,0.036533173,0.000028673525,0.000046122314,0.00057028636,0.00015343435,0.00038917045,0.9590303,0.000026347685,0.0018042357,0.000013304538],"about_ca_topic_score_codex":0.0018887635,"about_ca_topic_score_gemma":0.0026816884,"teacher_disagreement_score":0.0018887635,"about_ca_system_score_codex":0.00020916389,"about_ca_system_score_gemma":0.00028200663,"threshold_uncertainty_score":0.0037555099},"labels":[],"label_agreement":null},{"id":"W1977434337","doi":"10.1016/j.vetmic.2010.02.003","title":"Yersinia ruckeri genes that attenuate survival in rainbow trout (Oncorhynchus mykiss) are identified using signature-tagged mutants","year":2010,"lang":"en","type":"article","venue":"Veterinary Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Science Council; Université Laval","keywords":"Yersinia ruckeri; Biology; Major facilitator superfamily; Rainbow trout; Microbiology; Mutant; Gene; Genetics; Transposable element","score_opus":0.03851815209334409,"score_gpt":0.30808077217471236,"score_spread":0.2695626200813683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977434337","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979996,0.00014690739,0.0009530718,0.00006681606,0.000021683332,0.000020745525,0.0003319145,0.000051588573,0.00040768206],"genre_scores_gemma":[0.9950229,0.00017310808,0.0010486582,0.000064335945,0.0000061921423,0.000040955027,0.0005427264,0.000042798,0.0030584096],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999082,0.000012248915,0.000010749757,0.000017514814,0.00002443519,0.00002684075],"domain_scores_gemma":[0.9998746,0.000019779782,0.000058017155,0.000008589844,0.00000885888,0.000030177196],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014020911,0.0005196587,0.00025509443,0.00026446165,0.00016989654,0.00022271492,0.00027506347,0.00031110988,0.0013105789],"category_scores_gemma":[0.00014110707,0.00020574986,0.00034327037,0.00013664919,0.00034128787,0.00013757747,0.00021921996,0.0004147091,0.0003027072],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014193104,0.000025364116,0.0002647813,0.000012296685,0.0000061571236,0.000048043206,0.000013673132,0.000082818115,0.999067,0.00006644204,0.000023718287,0.00024776405],"study_design_scores_gemma":[0.00011727332,0.0007529609,0.03383577,0.000011783232,0.00007798591,0.0005479932,0.00012804156,0.0032239754,0.95982164,0.000093789386,0.001372683,0.000016046513],"about_ca_topic_score_codex":0.0030544794,"about_ca_topic_score_gemma":0.0064362087,"teacher_disagreement_score":0.0030544794,"about_ca_system_score_codex":0.00051313266,"about_ca_system_score_gemma":0.00039706109,"threshold_uncertainty_score":0.0060733557},"labels":[],"label_agreement":null},{"id":"W1979102004","doi":"10.1080/00480169.2003.36371","title":"Competitive exclusion of<i>Yersinia enterocolitica</i>biotype 4, serotype O:3 by<i>Yersinia enterocolitica</i>biotype 1A, serotype O:6,30 in tissue culture and in pigs","year":2003,"lang":"en","type":"article","venue":"New Zealand Veterinary Journal","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Lotto New Zealand; Massey University","keywords":"Serotype; Microbiology; Biology; Yersinia enterocolitica; In vitro; Strain (injury); Bacteria; Biochemistry","score_opus":0.012374878265099327,"score_gpt":0.2925238575270237,"score_spread":0.2801489792619244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979102004","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99834013,0.00056283554,0.00039871834,0.000038465325,0.000021377513,0.000027672078,0.00012312084,0.000008239219,0.00047941],"genre_scores_gemma":[0.9945962,0.0009918694,0.0013119186,0.00011728316,0.000030340205,0.000081609454,0.00050650944,0.000010087985,0.0023542624],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999062,0.00025176076,0.000045927638,0.00014917825,0.00015393452,0.00033710877],"domain_scores_gemma":[0.9992106,0.0002450253,0.00021817184,0.000074034964,0.00008138768,0.00017074474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058754324,0.0007373724,0.0007001297,0.00026738056,0.00025395537,0.00041067664,0.0004426263,0.0006972688,0.0007326964],"category_scores_gemma":[0.00045684382,0.00041476268,0.0007727057,0.00018456217,0.00041387122,0.00045958135,0.00038258178,0.001037996,0.0002884007],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011610771,0.00033898297,0.0017050857,0.00010778699,0.00001758982,0.00013443903,0.000079446596,0.00013885934,0.9952852,0.000047139463,0.00008143213,0.0009030451],"study_design_scores_gemma":[0.0001646315,0.04032651,0.05038786,0.000044120978,0.0001153807,0.000936117,0.00035253094,0.0023033672,0.90386486,0.00008946268,0.001373066,0.000042039625],"about_ca_topic_score_codex":0.0030053144,"about_ca_topic_score_gemma":0.004529967,"teacher_disagreement_score":0.0030053144,"about_ca_system_score_codex":0.0006076787,"about_ca_system_score_gemma":0.00047569376,"threshold_uncertainty_score":0.0059756637},"labels":[],"label_agreement":null},{"id":"W1979345248","doi":"10.1016/j.mimet.2012.05.012","title":"Rapid detection and antimicrobial resistance gene profiling of Yersinia pestis using pyrosequencing technology","year":2012,"lang":"en","type":"article","venue":"Journal of Microbiological Methods","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"Defence Research and Development Canada","keywords":"Pyrosequencing; Biology; Amplicon; Gene; Computational biology; Antibiotic resistance; DNA sequencing; Genetics; Yersinia pestis; Virulence; Polymerase chain reaction; Bacteria","score_opus":0.042453207813567415,"score_gpt":0.3607617818410196,"score_spread":0.31830857402745216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979345248","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9037926,0.001513447,0.089577846,0.0001672595,0.000065302236,0.00018469113,0.002600988,0.00037473306,0.0017230554],"genre_scores_gemma":[0.88357973,0.0012365346,0.107877105,0.00017674128,0.0000414738,0.00032429633,0.0037858784,0.00006079365,0.002917429],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990195,0.0001895894,0.000056608093,0.00020733729,0.0004466687,0.0000802231],"domain_scores_gemma":[0.9995803,0.00016153735,0.000052505202,0.000045025612,0.00012784422,0.000032686494],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007297533,0.00055271195,0.00060691504,0.00067513407,0.00031997843,0.0005208796,0.00029889593,0.0006168807,0.00032127235],"category_scores_gemma":[0.0011575371,0.00039470335,0.0004190021,0.00048001643,0.0002761974,0.00036657104,0.00040134997,0.0008005713,0.00036283574],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006585974,0.000022595395,0.00047524867,0.000019812076,0.0000063943585,0.000014460914,0.000019543051,0.00012171291,0.9962069,0.000041099014,0.000026394684,0.0029798788],"study_design_scores_gemma":[0.000017961585,0.0003728692,0.016322713,0.0000129205255,0.00004558329,0.00031201664,0.00005671823,0.008747265,0.97230273,0.00022517481,0.0015624282,0.000021556163],"about_ca_topic_score_codex":0.0005750037,"about_ca_topic_score_gemma":0.0010803203,"teacher_disagreement_score":0.0007297533,"about_ca_system_score_codex":0.0002140622,"about_ca_system_score_gemma":0.0002992621,"threshold_uncertainty_score":0.0038593411},"labels":[],"label_agreement":null},{"id":"W1979700649","doi":"10.1002/ajhb.20618","title":"Social contexts, syndemics, and infectious disease in northern Aboriginal populations","year":2007,"lang":"en","type":"article","venue":"American Journal of Human Biology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Pandemic; Infectious disease (medical specialty); Disease; Hum; Emerging infectious disease; Context (archaeology); Social environment; Ecology; Geography; Biology; Coronavirus disease 2019 (COVID-19); Sociology; History; Medicine; Social science","score_opus":0.013290249949170585,"score_gpt":0.3614249111626892,"score_spread":0.3481346612135186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979700649","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979499,0.00056610996,0.000014506968,0.0002188955,0.0000060452526,0.0000043782084,0.000019171379,8.44236e-7,0.0012200525],"genre_scores_gemma":[0.9990238,0.0005505997,0.00003228982,0.000028197679,0.000011708827,0.000005561647,0.000017118666,5.5174684e-7,0.00033019745],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996804,0.00012860177,0.000014780409,0.0000399057,0.000045120694,0.00009116613],"domain_scores_gemma":[0.99967694,0.000032022417,0.000107168984,0.000016864946,0.00003762082,0.0001293732],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045757496,0.00021359815,0.0002664494,0.00086735643,0.0026546358,0.0009054444,0.00022496372,0.0003306602,0.0017210975],"category_scores_gemma":[0.0012397186,0.00017098311,0.00016937312,0.0007311577,0.0012041425,0.00040688927,0.0013392402,0.00039003178,0.00008720037],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014299173,0.00021117355,0.90618205,0.00009444518,0.00010580486,0.0013448988,0.072896756,0.000104570005,0.0017319508,0.0014358514,0.00040215414,0.015347279],"study_design_scores_gemma":[0.0000043064324,0.00009133362,0.96542645,0.000038956077,0.000025666679,0.0003367757,0.032609485,0.0000707934,0.00005336321,0.0004341842,0.0008999148,0.000008858197],"about_ca_topic_score_codex":0.17379664,"about_ca_topic_score_gemma":0.23114675,"teacher_disagreement_score":0.82620335,"about_ca_system_score_codex":0.0012601214,"about_ca_system_score_gemma":0.0012098616,"threshold_uncertainty_score":0.3455701},"labels":[],"label_agreement":null},{"id":"W1982725986","doi":"10.1016/s1473-3099(14)70923-5","title":"Yersinia pestis and the three plague pandemics–Authors' reply","year":2014,"lang":"en","type":"letter","venue":"The Lancet Infectious Diseases","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Yersinia pestis; Plague (disease); Pandemic; Context (archaeology); Geography; China; Genealogy; History; Ethnology; Biology; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty); Medicine; Disease; Archaeology; Virulence; Genetics","score_opus":0.018229068728218143,"score_gpt":0.2731484821805289,"score_spread":0.25491941345231073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982725986","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001749467,0.0017097323,0.000038146245,0.9597936,0.037543595,0.000007974374,0.000042842497,0.000013153039,0.00067597494],"genre_scores_gemma":[0.00207664,0.00079964806,0.00006492858,0.94633216,0.04797568,0.000029943678,0.000018115226,0.000010295378,0.0026926154],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967481,0.0011339623,0.00030131201,0.00043813387,0.00090707646,0.0004714475],"domain_scores_gemma":[0.9912949,0.005254825,0.00063681597,0.00030486946,0.0012483839,0.0012602767],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0044165286,0.0008687774,0.0017918174,0.00090216985,0.0033321022,0.003412244,0.0020487304,0.058851175,0.004989781],"category_scores_gemma":[0.026348453,0.0009945111,0.0014086155,0.000577221,0.003865917,0.004423344,0.002523136,0.045531813,0.0035824378],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006887462,0.000024310815,0.0002999305,0.000038491406,0.000018447643,0.00045111723,0.00009125407,0.00003217697,0.000068054105,0.0011374741,0.9939149,0.0038550775],"study_design_scores_gemma":[0.00025787443,0.000099599485,0.0013510109,0.00027747036,0.00005736763,0.00080232794,0.00055209914,0.00026013455,0.00017270986,0.008563933,0.98749894,0.00010648538],"about_ca_topic_score_codex":0.0050483234,"about_ca_topic_score_gemma":0.0071830885,"teacher_disagreement_score":0.058851175,"about_ca_system_score_codex":0.0033700606,"about_ca_system_score_gemma":0.0035787006,"threshold_uncertainty_score":0.024451613},"labels":[],"label_agreement":null},{"id":"W1983282440","doi":"10.1371/journal.ppat.1001057","title":"Breaking the Stereotype: Virulence Factor–Mediated Protection of Host Cells in Bacterial Pathogenesis","year":2010,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Canada's Michael Smith Genome Sciences Centre","funders":"Canadian Institutes of Health Research; University of British Columbia; Crohn's and Colitis Foundation of Canada; Howard Hughes Medical Institute","keywords":"Virulence; Virulence factor; Pathogenesis; Microbiology; Host (biology); Biology; Host factors; Host factor; Stereotype (UML); Mechanism (biology); Immunology; Genetics; Gene; Psychology; Social psychology; Virus","score_opus":0.01710288498334997,"score_gpt":0.24517314669315396,"score_spread":0.228070261709804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983282440","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15023918,0.5252656,0.15103938,0.08094048,0.01479339,0.00028222328,0.0007649888,0.0013894629,0.075285405],"genre_scores_gemma":[0.67679733,0.21461065,0.034956086,0.029554952,0.011478849,0.00033626665,0.00051764934,0.0002189208,0.031529315],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99862087,0.00030409265,0.00009119927,0.00031422346,0.00044217592,0.00022751195],"domain_scores_gemma":[0.9991879,0.0001964863,0.00021771381,0.000107722924,0.00010537213,0.00018478223],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019929183,0.001021531,0.0010030007,0.0007022149,0.0010578753,0.0022985067,0.0013553746,0.0036482238,0.003454203],"category_scores_gemma":[0.0009566931,0.00022671284,0.0005849807,0.00044199213,0.0040530767,0.0056375177,0.002686204,0.005237353,0.0021145048],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011416646,0.0002963777,0.002699475,0.0048000463,0.00011222248,0.0019590613,0.0016230457,0.0008242818,0.4101338,0.32964763,0.021361856,0.22540052],"study_design_scores_gemma":[0.00033311095,0.0034353333,0.016526714,0.0017269765,0.00015816283,0.008488746,0.0018557931,0.004353607,0.16624232,0.31714568,0.47949556,0.00023806572],"about_ca_topic_score_codex":0.0002466565,"about_ca_topic_score_gemma":0.00028840153,"teacher_disagreement_score":0.0036482238,"about_ca_system_score_codex":0.0010542535,"about_ca_system_score_gemma":0.0007882607,"threshold_uncertainty_score":0.011555493},"labels":[],"label_agreement":null},{"id":"W1983468378","doi":"10.1016/s0264-410x(00)00019-0","title":"Intranasal immunization with liposome-formulated Yersinia pestis vaccine enhances mucosal immune responses","year":2000,"lang":"en","type":"article","venue":"Vaccine","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Nasal administration; Immune system; Immunization; Immunology; Antigen; Immunity; Vaccination; Medicine; Yersinia pestis; Virology; Microbiology; Biology; Virulence","score_opus":0.005411900338608119,"score_gpt":0.24877143024446852,"score_spread":0.2433595299058604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983468378","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99640983,0.00096599146,0.0010477711,0.00015672852,0.00012238669,0.000078833764,0.00008788287,0.00007073477,0.0010598268],"genre_scores_gemma":[0.99561065,0.000655505,0.0009845824,0.00012310033,0.00005599631,0.00006191491,0.00022133773,0.000018828783,0.0022679535],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997917,0.0000357611,0.000011723482,0.00003615777,0.000031848314,0.000092871676],"domain_scores_gemma":[0.9998661,0.00004340439,0.000020363474,0.000017213368,0.000018068862,0.000034746496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003748083,0.00064050924,0.00063691684,0.00027395692,0.00019553333,0.0004026658,0.00019340448,0.0007178478,0.0017171109],"category_scores_gemma":[0.00027247344,0.0002315539,0.0003256776,0.00011389495,0.00030117345,0.0004790417,0.0002401352,0.0018477609,0.0005819913],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012996471,0.0005338716,0.0001644135,0.00008618658,0.000011159889,0.000049793278,0.0000328774,0.00010945378,0.99470156,0.00007364676,0.00011758578,0.0028198932],"study_design_scores_gemma":[0.0004565491,0.00855524,0.003766173,0.000030472429,0.000091437476,0.00022443381,0.000080405225,0.0017412066,0.9835554,0.00010531066,0.001384769,0.000008634382],"about_ca_topic_score_codex":0.0004132115,"about_ca_topic_score_gemma":0.0007745712,"teacher_disagreement_score":0.0017171109,"about_ca_system_score_codex":0.00033688213,"about_ca_system_score_gemma":0.00037450166,"threshold_uncertainty_score":0.005744338},"labels":[],"label_agreement":null},{"id":"W1983861488","doi":"10.1071/wr06140","title":"Increasing the target-specificity of ERADICAT® for feral cat (Felis catus) control by encapsulating a toxicant","year":2007,"lang":"en","type":"article","venue":"Wildlife Research","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Department of Environment and Conservation","funders":"","keywords":"Toxicant; Pellet; Biology; Felis catus; Feral cat; Toxicology; CATS; Felis; Zoology; Animal science; Ecology; Veterinary medicine; Predation; Toxicity; Chemistry; Medicine","score_opus":0.03154881625757824,"score_gpt":0.3585682800367027,"score_spread":0.3270194637791245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983861488","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975235,0.0004439252,0.0007562031,0.000059950824,0.000007224794,0.000027333519,0.00003034572,0.000020714795,0.0011308838],"genre_scores_gemma":[0.99479127,0.00038141184,0.0024712188,0.000075129734,0.000004711847,0.000031233783,0.00011962211,0.0000066174944,0.002118875],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99975604,0.000039300972,0.000016824415,0.00006160204,0.00009218037,0.00003418033],"domain_scores_gemma":[0.9997906,0.000034229954,0.000077731915,0.000011332248,0.000055548997,0.00003057872],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034473406,0.00023907654,0.000267002,0.0003105969,0.0001277911,0.00042958322,0.00027520722,0.00033638516,0.0017115966],"category_scores_gemma":[0.00027982998,0.00011988768,0.00015391363,0.000088984474,0.0002526052,0.0002663341,0.00025977718,0.00022258777,0.00022911646],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025278618,0.00016802584,0.009282469,0.00015832449,0.000028485838,0.000083635074,0.000061306426,0.00019108709,0.97489196,0.00006736,0.00008976722,0.0147249065],"study_design_scores_gemma":[0.00008834263,0.008788924,0.23360969,0.000090838694,0.00014416596,0.0011375474,0.00031093135,0.0045002676,0.7443569,0.00006992284,0.0068807285,0.000021709664],"about_ca_topic_score_codex":0.002714158,"about_ca_topic_score_gemma":0.0073117022,"teacher_disagreement_score":0.002714158,"about_ca_system_score_codex":0.00037437034,"about_ca_system_score_gemma":0.00024774706,"threshold_uncertainty_score":0.00572592},"labels":[],"label_agreement":null},{"id":"W1984763490","doi":"10.2166/wh.2009.084","title":"An evaluation of methods for the isolation of Yersinia enterocolitica from surface waters in the Grand River watershed","year":2009,"lang":"en","type":"article","venue":"Journal of Water and Health","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Water Network; University of Waterloo; Ontario Ministry of Health and Long-Term Care; Public Health Agency; Public Health Agency of Canada","keywords":"Yersinia enterocolitica; Isolation (microbiology); Yersinia; Surface water; Microbiology; Biology; Pathogen; Veterinary medicine; Bacteria; Environmental science; Environmental engineering; Medicine","score_opus":0.0684952403650134,"score_gpt":0.4412986185417814,"score_spread":0.372803378176768,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984763490","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99187297,0.0010058196,0.005217517,0.00013577452,0.00001402547,0.00040574718,0.00031785274,0.0000651103,0.00096509024],"genre_scores_gemma":[0.9322862,0.0032778855,0.05796853,0.00013040498,0.000028786557,0.00045700208,0.0021389374,0.000057453024,0.003654842],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99639964,0.0009580978,0.00022608596,0.000479715,0.0016973517,0.00023911546],"domain_scores_gemma":[0.99772304,0.00069554505,0.00039662173,0.00015832305,0.00090797147,0.00011848026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024871875,0.0009569332,0.00050262053,0.0007782339,0.0007360833,0.0010621914,0.0007723015,0.0006565737,0.000507918],"category_scores_gemma":[0.0033771296,0.00035670615,0.00034539096,0.0008719072,0.00081037683,0.0004414795,0.00060257723,0.00037817418,0.00025452086],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00093118893,0.00038581988,0.07093692,0.0006970487,0.0001168167,0.00025979153,0.0012903765,0.00084423606,0.870485,0.000060746283,0.00017627561,0.05381569],"study_design_scores_gemma":[0.000086730695,0.010303583,0.4035843,0.00016490725,0.0003319215,0.0010954946,0.002724549,0.00492839,0.56746864,0.000058160138,0.009159823,0.00009354484],"about_ca_topic_score_codex":0.05386183,"about_ca_topic_score_gemma":0.08897221,"teacher_disagreement_score":0.05386183,"about_ca_system_score_codex":0.0012964866,"about_ca_system_score_gemma":0.0019737028,"threshold_uncertainty_score":0.10709661},"labels":[],"label_agreement":null},{"id":"W1985319029","doi":"10.1371/journal.ppat.1002963","title":"Humanized TLR4/MD-2 Mice Reveal LPS Recognition Differentially Impacts Susceptibility to Yersinia pestis and Salmonella enterica","year":2012,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; National Heart, Lung, and Blood Institute","keywords":"Yersinia pestis; Salmonella enterica; Salmonella; Microbiology; TLR4; Yersinia; Biology; Yersinia pseudotuberculosis; Virology; Bacteria; Gene; Immunology; Immune system; Virulence; Genetics","score_opus":0.02858602344792832,"score_gpt":0.27774325112589887,"score_spread":0.24915722767797055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985319029","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99548507,0.00037228165,0.0016558939,0.00033927485,0.000056451463,0.000056724264,0.0012307114,0.000117541786,0.00068603834],"genre_scores_gemma":[0.98662263,0.00048360229,0.0029376093,0.00038676854,0.000052026266,0.00028358484,0.0015955665,0.00008566841,0.0075525437],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994473,0.000085961314,0.00006434958,0.00017887726,0.00007363139,0.00014995609],"domain_scores_gemma":[0.99956244,0.00004087344,0.00017136581,0.00003945396,0.000026108431,0.00015972761],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037811432,0.0010655193,0.000491851,0.0008577119,0.0003371808,0.0005391789,0.00039566908,0.0011459176,0.003891128],"category_scores_gemma":[0.00024217533,0.0005950618,0.00057967304,0.00022891404,0.0010491847,0.00060437806,0.00044198713,0.0022661758,0.00071545027],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018403281,0.0003210809,0.000429898,0.000036636062,0.000015220856,0.0001501142,0.00004088011,0.00008859381,0.9960341,0.00019564416,0.0001302523,0.0007173253],"study_design_scores_gemma":[0.0006652873,0.006083342,0.017930176,0.000039544026,0.00012836223,0.002573726,0.00029966008,0.002424991,0.96482307,0.00051800965,0.004458263,0.000055562694],"about_ca_topic_score_codex":0.00049189787,"about_ca_topic_score_gemma":0.00062621024,"teacher_disagreement_score":0.003891128,"about_ca_system_score_codex":0.00058001763,"about_ca_system_score_gemma":0.00033441628,"threshold_uncertainty_score":0.013017178},"labels":[],"label_agreement":null},{"id":"W1985686154","doi":"10.1097/01.inf.0000190036.20256.ea","title":"INTESTINAL OBSTRUCTION COMPLICATING YERSINIA ENTEROCOLITICA SEROTYPE O:21 INFECTION IN AN INFANT","year":2005,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario; University of Ottawa","funders":"","keywords":"Yersinia enterocolitica; Yersiniosis; Enterocolitis; Serotype; Yersinia; Medicine; Yersinia Infections; Complication; Microbiology; Immunology; Enterobacteriaceae; Gastroenterology; Internal medicine; Biology; Bacteria; Escherichia coli","score_opus":0.011977282467829703,"score_gpt":0.2906665494010833,"score_spread":0.2786892669332536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985686154","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99416155,0.0019749494,0.0005141734,0.00040872386,0.000056433535,0.000035388195,0.00003849552,0.000080005855,0.0027302532],"genre_scores_gemma":[0.998159,0.00092900055,0.0002590637,0.00015585302,0.00016063772,0.000009299911,0.000038994705,0.000010978945,0.00027712912],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99951565,0.000083813764,0.000043785356,0.00005772033,0.0000673194,0.00023176418],"domain_scores_gemma":[0.99817765,0.0005838918,0.0005317065,0.000074123374,0.000058955353,0.0005737588],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034137754,0.0017125974,0.0010547588,0.0011121983,0.0013859742,0.0009877707,0.0004347515,0.0025115244,0.0011906571],"category_scores_gemma":[0.0036793672,0.0009820024,0.0004934025,0.0007771978,0.0013008447,0.0009498965,0.0010868271,0.0020881025,0.000383655],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013597976,0.000049177408,0.029354697,0.000041492454,0.000008868856,0.96637785,0.00024206571,0.0000563668,0.0017823784,0.00009070912,0.00019513286,0.001665291],"study_design_scores_gemma":[0.000018970863,0.00030553658,0.034665078,0.000012816278,0.000021776454,0.9637555,0.00013583146,0.00013325558,0.00058168627,0.000045180812,0.00031218436,0.000012182444],"about_ca_topic_score_codex":0.0014560181,"about_ca_topic_score_gemma":0.0017935478,"teacher_disagreement_score":0.0025115244,"about_ca_system_score_codex":0.00059599755,"about_ca_system_score_gemma":0.00038372795,"threshold_uncertainty_score":0.004324317},"labels":[],"label_agreement":null},{"id":"W1985879267","doi":"10.3138/carto.45.1.19","title":"Essential, Illustrative, or … Just Propaganda? Rethinking John Snow's Broad Street Map","year":2010,"lang":"en","type":"article","venue":"Cartographica The International Journal for Geographic Information and Geovisualization","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Argument (complex analysis); Spatialization; Snow; History; Perspective (graphical); Cartography; Geography; Epistemology; Environmental ethics; Sociology; Meteorology; Visual arts; Art; Philosophy; Anthropology; Medicine","score_opus":0.01505669795583481,"score_gpt":0.3199002376008636,"score_spread":0.3048435396450288,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985879267","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09928584,0.030403487,0.14562084,0.2702477,0.0090489825,0.00017261428,0.0008040856,0.0006915919,0.44372493],"genre_scores_gemma":[0.84549385,0.022467757,0.055724494,0.0077800215,0.0034396932,0.00023647462,0.00031450155,0.00086806115,0.06367504],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"qualitative","domain_scores_codex":[0.99612635,0.002885752,0.00010249159,0.00019351539,0.00054172054,0.00015023995],"domain_scores_gemma":[0.98730135,0.009887051,0.0004041377,0.0009076814,0.0012603032,0.00023950213],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0061966917,0.0005693579,0.00031004247,0.0038986336,0.004040928,0.011503014,0.0009787645,0.0012797529,0.0046678134],"category_scores_gemma":[0.017042201,0.00035862398,0.0002338585,0.004028028,0.016598681,0.012800251,0.0035116621,0.0025514197,0.0007205774],"study_design_candidate":"qualitative","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024541372,0.000007885776,0.0008062168,0.00019845543,0.000008477988,0.00024452794,0.11330302,0.0003187126,0.00025441023,0.7947767,0.04149954,0.048557628],"study_design_scores_gemma":[0.0000069134703,0.000013399709,0.0007843527,0.0003120965,0.000010437755,0.00015593712,0.039683614,0.00062257174,0.00033646778,0.15083574,0.8072195,0.000019002719],"about_ca_topic_score_codex":0.010895948,"about_ca_topic_score_gemma":0.019665733,"teacher_disagreement_score":0.99595904,"about_ca_system_score_codex":0.0031660362,"about_ca_system_score_gemma":0.0020716498,"threshold_uncertainty_score":0.032771647},"labels":[],"label_agreement":null},{"id":"W1986192055","doi":"10.1016/j.prevetmed.2009.10.003","title":"Prevalence of Yersinia enterocolitica shedding and bioserotype distribution in Ontario finisher pig herds in 2001, 2002, and 2004","year":2009,"lang":"en","type":"article","venue":"Preventive Veterinary Medicine","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Ministry of Health and Long Term Care; Canadian Food Inspection Agency; University of Guelph","funders":"","keywords":"Herd; Yersinia enterocolitica; Feces; Veterinary medicine; Biology; Animal science; Cluster (spacecraft); Medicine; Microbiology; Bacteria","score_opus":0.021985846659077695,"score_gpt":0.30868204173144415,"score_spread":0.28669619507236643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986192055","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985582,0.000082428785,0.000021616699,0.00002438015,0.0000015286586,0.000005030159,0.0007079497,0.0000032681962,0.0005954985],"genre_scores_gemma":[0.9973424,0.00013268336,0.0000615673,0.000019576935,0.0000017150044,0.0000061394944,0.00077586586,0.0000017440763,0.0016583444],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99981934,0.000012457881,0.000011861754,0.000039261166,0.000050129187,0.00006688448],"domain_scores_gemma":[0.9993579,0.000049947084,0.00023199935,0.000021356369,0.00017984888,0.00015892237],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022927378,0.0001759253,0.00014604586,0.0012806376,0.0006927734,0.00041995005,0.00034194803,0.00027259218,0.0011745045],"category_scores_gemma":[0.0005896352,0.0002897064,0.00021639999,0.0010778531,0.00039331752,0.00027128833,0.00022883088,0.00020700293,0.00014049365],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011803988,0.000016142503,0.996856,0.00000888965,0.000017257194,0.00007858826,0.0004922402,0.000027149561,0.0010272055,0.000012092886,0.00020463282,0.0011417955],"study_design_scores_gemma":[0.0000010229115,0.00001240186,0.99961734,0.0000017694294,0.00000296046,0.000019512467,0.00019513314,0.000022024593,0.000025769674,8.179352e-7,0.000100349316,8.4637435e-7],"about_ca_topic_score_codex":0.8584768,"about_ca_topic_score_gemma":0.9502871,"teacher_disagreement_score":0.14152318,"about_ca_system_score_codex":0.0047506657,"about_ca_system_score_gemma":0.0025993253,"threshold_uncertainty_score":0.28471327},"labels":[],"label_agreement":null},{"id":"W1988133609","doi":"10.1074/jbc.m111.233858","title":"Identification of Bacterial Target Proteins for the Salicylidene Acylhydrazide Class of Virulence-blocking Compounds","year":2011,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Biotechnology and Biological Sciences Research Council; Wellcome Trust","keywords":"Virulence; Escherichia coli; Yersinia pseudotuberculosis; Biology; Secretion; Gene; Microbiology; Function (biology); Pathogenicity island; Yersinia; Yersinia pestis; Enterobacteriaceae; Type three secretion system; Identification (biology); Genetics; Bacteria; Biochemistry","score_opus":0.043690810099216694,"score_gpt":0.29629106386377896,"score_spread":0.25260025376456224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988133609","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912555,0.001956749,0.0049423785,0.00013352453,0.000014776388,0.00005705322,0.0002929934,0.000055951845,0.0012911502],"genre_scores_gemma":[0.99040014,0.0016788865,0.0052828076,0.00009634485,0.000017598539,0.000050353407,0.0006880091,0.000019580253,0.0017664124],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999347,0.000011452256,0.0000038491225,0.000009360156,0.000024361054,0.000016366877],"domain_scores_gemma":[0.99992096,0.000019469795,0.000016569056,0.000006921616,0.000017478595,0.000018557721],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010888363,0.00026477425,0.00032104852,0.00020127016,0.000117557014,0.00017967097,0.00012892252,0.00028665477,0.0010771208],"category_scores_gemma":[0.000117820404,0.00009971005,0.00020363771,0.00014243592,0.00014231645,0.00013644062,0.0001386799,0.00028195124,0.00047777646],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043989596,0.000009250014,0.00011396092,0.00001177047,0.0000016205919,0.00002314974,0.0000031288141,0.000017470342,0.9992391,0.000023212304,0.000008125981,0.0005052623],"study_design_scores_gemma":[0.0000136018725,0.00028620125,0.0047365176,0.0000032519304,0.0000127108815,0.0003159674,0.000017612643,0.00037295162,0.99314404,0.000035229066,0.0010594327,0.000002583594],"about_ca_topic_score_codex":0.00020325866,"about_ca_topic_score_gemma":0.00032765456,"teacher_disagreement_score":0.0010771208,"about_ca_system_score_codex":0.00017870852,"about_ca_system_score_gemma":0.00012196622,"threshold_uncertainty_score":0.0036033392},"labels":[],"label_agreement":null},{"id":"W1989554073","doi":"10.1016/s0966-842x(99)01657-1","title":"Phosphatases and kinases delivered to the host cell by bacterial pathogens","year":2000,"lang":"en","type":"review","venue":"Trends in Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":109,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Effector; Kinase; Yersinia; Phosphatase; Microbiology; Secretion; Pathogen; Cell biology; Host (biology); Type three secretion system; Protein-Serine-Threonine Kinases; Shigella; Salmonella; Phosphorylation; Bacteria; Protein kinase A; Biochemistry; Genetics; Virulence","score_opus":0.018170908241215852,"score_gpt":0.3065409772039067,"score_spread":0.28837006896269085,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989554073","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000533228,0.99638605,0.0005215573,0.00025977448,0.0005260326,0.0000061189485,0.00002038786,0.000020421818,0.0017264063],"genre_scores_gemma":[0.0013590029,0.99583566,0.00035519208,0.00020085757,0.000325256,0.000009745623,0.000038803308,0.0000023230546,0.0018731548],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99979883,0.00002019794,0.00002613344,0.000049010487,0.00008312893,0.000022860608],"domain_scores_gemma":[0.9998265,0.00006285148,0.000027044205,0.000010509328,0.00004848863,0.000024636314],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005629679,0.0015328177,0.0022582212,0.0013532843,0.0003674135,0.0017389007,0.0015217403,0.001550472,0.0025119532],"category_scores_gemma":[0.00054666505,0.0004796958,0.00032780797,0.0020457776,0.0008081775,0.0023677184,0.0006762971,0.0018190052,0.003907298],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033190573,0.000081344835,0.00019669904,0.009316739,0.00008579175,0.00078447495,0.00008932449,0.00071365567,0.026068892,0.0059330002,0.02833261,0.92806554],"study_design_scores_gemma":[0.00006125052,0.00010938137,0.0006052968,0.00071116217,0.0000815089,0.0015170488,0.000084841406,0.00015625809,0.0055626393,0.0023052578,0.98878187,0.000023524313],"about_ca_topic_score_codex":0.00077035633,"about_ca_topic_score_gemma":0.0015004791,"teacher_disagreement_score":0.0025119532,"about_ca_system_score_codex":0.0009034132,"about_ca_system_score_gemma":0.00083391176,"threshold_uncertainty_score":0.008403301},"labels":[],"label_agreement":null},{"id":"W1990194178","doi":"10.11646/zootaxa.3731.4.10","title":"Is Leopoldamys neilli (Rodentia, Muridae) a synonym of Leopoldamys herberti? A reply to Balakirev et al. (2013)","year":2013,"lang":"en","type":"article","venue":"Zootaxa","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Minnow Environmental (Canada)","funders":"Fonds De La Recherche Scientifique - FNRS","keywords":"Lineage (genetic); Biology; Synonym (taxonomy); Phylogenetic tree; Evolutionary biology; Type locality; Zoology; Genus; Genetics; Gene","score_opus":0.013203729948370073,"score_gpt":0.28916375253238064,"score_spread":0.2759600225840106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990194178","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.006160392,0.038950775,0.0027959954,0.87044066,0.079826556,0.000030888812,0.00020220425,0.00012990172,0.0014626703],"genre_scores_gemma":[0.10232534,0.039104596,0.0053646215,0.6942284,0.15386656,0.00014052847,0.00023989908,0.000133823,0.004596194],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99768984,0.0008003038,0.0004038609,0.00057634624,0.00040610717,0.00012342],"domain_scores_gemma":[0.9865878,0.007370275,0.0014384893,0.00084984064,0.0029432345,0.0008103179],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006790562,0.000814414,0.0017671055,0.0011333319,0.0021819533,0.002225494,0.0043921093,0.0094567565,0.002362263],"category_scores_gemma":[0.018172741,0.00042357575,0.0005873249,0.0011532013,0.008012366,0.008636435,0.003380667,0.019419957,0.002540739],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026254437,0.00007677538,0.008518611,0.0018951823,0.00014301187,0.0039263396,0.007424791,0.00031796817,0.002295998,0.013161379,0.8412786,0.12069871],"study_design_scores_gemma":[0.00006278194,0.00017470671,0.008866769,0.001639845,0.00009407524,0.009349755,0.010082934,0.00069869694,0.001042501,0.032318655,0.9354073,0.00026197088],"about_ca_topic_score_codex":0.0039900453,"about_ca_topic_score_gemma":0.0041433168,"teacher_disagreement_score":0.0094567565,"about_ca_system_score_codex":0.0012620275,"about_ca_system_score_gemma":0.0015599628,"threshold_uncertainty_score":0.035912335},"labels":[],"label_agreement":null},{"id":"W1991909065","doi":"10.1038/nature10549","title":"A draft genome of Yersinia pestis from victims of the Black Death","year":2011,"lang":"en","type":"article","venue":"Nature","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":799,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research; Michael G. DeGroote Institute for Infectious Disease Research, McMaster University; Wenner-Gren Foundation; Carl-Zeiss-Stiftung; Eunice Kennedy Shriver National Institute of Child Health and Human Development; Canada Research Chairs; Natural Sciences and Engineering Research Council of Canada; University at Albany; McMaster University; James S. McDonnell Foundation","keywords":"Yersinia pestis; Genome; Biology; Plague (disease); Genetics; Geography; Gene; Virulence; Archaeology","score_opus":0.013015549365746795,"score_gpt":0.2549482794978566,"score_spread":0.2419327301321098,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991909065","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47280332,0.0146617815,0.035434403,0.0026198502,0.00096327293,0.00054005993,0.46246183,0.0021165335,0.008398885],"genre_scores_gemma":[0.20682554,0.009618435,0.06614201,0.00043412924,0.00029712808,0.0003683234,0.70940197,0.00087512634,0.0060373386],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99971706,0.000025393816,0.000030871117,0.000093309594,0.000088292545,0.000044986144],"domain_scores_gemma":[0.99906117,0.00023268818,0.00019466276,0.000094902185,0.00028621106,0.00013048913],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042468274,0.0008844281,0.001173497,0.0019568997,0.0010828907,0.0013003468,0.0007654517,0.0014207636,0.0038129992],"category_scores_gemma":[0.0017191177,0.0007972422,0.001129917,0.003986454,0.00045083548,0.00065626117,0.0008190641,0.0016570189,0.0023326967],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027982167,0.0001159969,0.019289518,0.005304821,0.00042376245,0.006911955,0.0033168162,0.0029477484,0.86938524,0.0010463998,0.016625423,0.07183407],"study_design_scores_gemma":[0.0004166888,0.0011339248,0.54671973,0.0013701649,0.0017740038,0.008498242,0.002135259,0.0037527718,0.06329117,0.0021732026,0.36838353,0.00035133015],"about_ca_topic_score_codex":0.009065068,"about_ca_topic_score_gemma":0.014458462,"teacher_disagreement_score":0.009065068,"about_ca_system_score_codex":0.00067693484,"about_ca_system_score_gemma":0.0015287036,"threshold_uncertainty_score":0.018024623},"labels":[],"label_agreement":null},{"id":"W1994235548","doi":"10.1016/j.tube.2015.02.001","title":"Human tuberculosis predates domestication in ancient Syria","year":2015,"lang":"en","type":"article","venue":"Tuberculosis","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":78,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Medical Research Council","keywords":"Domestication; Tuberculosis; Geography; Archaeology; Biology; Ecology; Medicine; Pathology","score_opus":0.025757402347334875,"score_gpt":0.31677840433290966,"score_spread":0.2910210019855748,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994235548","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993386,0.0015631043,0.00026530054,0.00026778682,0.00001747607,0.000005478413,0.000050979204,0.000009411319,0.0044344],"genre_scores_gemma":[0.998223,0.0008514083,0.000096636635,0.00003925703,0.000019071138,0.0000016734712,0.00002682108,0.000004108966,0.0007381483],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997888,0.00005707309,0.000013890005,0.00005270496,0.000019228388,0.00006824523],"domain_scores_gemma":[0.9996804,0.00005799245,0.00011676093,0.000035188863,0.00007495153,0.00003467001],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039320072,0.00026813085,0.00033995276,0.0008315932,0.0013642061,0.0012699226,0.00021029674,0.00045536712,0.0029576146],"category_scores_gemma":[0.00082091097,0.00024210768,0.00012573013,0.0008713058,0.0020923773,0.00082024705,0.00070115266,0.000526379,0.00044322226],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034596357,0.0002766963,0.64022446,0.0005978703,0.00017640683,0.008615275,0.038971547,0.0006559236,0.15020959,0.025405928,0.0017051448,0.1297015],"study_design_scores_gemma":[0.000019168852,0.00034998578,0.9575074,0.00015775351,0.00007213492,0.00505318,0.0077029713,0.0004138392,0.007837562,0.0019454544,0.018911833,0.00002875775],"about_ca_topic_score_codex":0.00326565,"about_ca_topic_score_gemma":0.0063469876,"teacher_disagreement_score":0.00326565,"about_ca_system_score_codex":0.0010551388,"about_ca_system_score_gemma":0.0005453944,"threshold_uncertainty_score":0.009894192},"labels":[],"label_agreement":null},{"id":"W1994269835","doi":"10.1111/j.1556-4029.2008.00938.x","title":"The Application of Remote Sensing for Detecting Mass Graves: An Experimental Animal Case Study from Costa Rica*","year":2008,"lang":"en","type":"article","venue":"Journal of Forensic Sciences","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University of Alberta; Simon Fraser University","funders":"","keywords":"Remote sensing; Geography; Environmental science","score_opus":0.04606454751951456,"score_gpt":0.36040730811155247,"score_spread":0.3143427605920379,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994269835","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988661,0.00005309902,0.00045515885,0.000038942922,0.0000011304986,0.000031589676,0.000037725666,0.0000055025557,0.00051091984],"genre_scores_gemma":[0.9972145,0.00011267259,0.002002713,0.000041010684,0.000002839927,0.000019994293,0.00007056447,0.00000282587,0.000532923],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99979156,0.0000761839,0.000011745886,0.000050903698,0.000039405164,0.000030078587],"domain_scores_gemma":[0.99956316,0.00016982526,0.000100139296,0.000056122666,0.000071595,0.000039220424],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047576497,0.00042503228,0.00025085724,0.00053590233,0.0006192984,0.00038313854,0.00035433145,0.00060364004,0.00033080683],"category_scores_gemma":[0.00067833235,0.00011373129,0.00021164084,0.00031396648,0.0007062757,0.00015280521,0.00034743393,0.00021584319,0.00007844141],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010353938,0.0021866162,0.752409,0.00036873028,0.00028000792,0.027472233,0.0056482353,0.00671059,0.15341617,0.0006847021,0.0005995092,0.04918885],"study_design_scores_gemma":[0.0000608183,0.0041947104,0.93663806,0.00005438517,0.00015092852,0.011524744,0.006834514,0.011471136,0.025221003,0.00031638006,0.003484645,0.000048679052],"about_ca_topic_score_codex":0.022032069,"about_ca_topic_score_gemma":0.08036049,"teacher_disagreement_score":0.022032069,"about_ca_system_score_codex":0.0007259311,"about_ca_system_score_gemma":0.00023891749,"threshold_uncertainty_score":0.043807685},"labels":[],"label_agreement":null},{"id":"W1995154596","doi":"10.1159/000101964","title":"Campora: A Young Genetic Isolate in South Italy","year":2007,"lang":"en","type":"article","venue":"Human Heredity","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Polytechnique Montréal","funders":"Associazione Italiana per la Ricerca sul Cancro; Regione Campania","keywords":"Biology; Genetics; Haplotype; Linkage disequilibrium; Population; Evolutionary biology; Locus (genetics); Autosome; Mitochondrial DNA; Population bottleneck; Population genetics; Genotype; Chromosome; Allele; Microsatellite; Gene; Demography","score_opus":0.017856873233322804,"score_gpt":0.2991607572688282,"score_spread":0.2813038840355054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995154596","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99905604,0.00007707356,0.00011728926,0.000019634695,0.0000024525061,0.000022145468,0.000059155358,0.0000026928985,0.0006434038],"genre_scores_gemma":[0.998185,0.00018017791,0.00049995753,0.00004695656,0.000009230049,0.00002820535,0.00027256878,0.0000037681482,0.00077401823],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998919,0.000017921499,0.000004657506,0.000043915355,0.00001239843,0.000029172472],"domain_scores_gemma":[0.9998983,0.000020934871,0.000027221799,0.0000105745885,0.000011410523,0.00003156285],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013292312,0.0002690848,0.00034578287,0.0006552818,0.0009381737,0.00042672374,0.00026728777,0.00028043333,0.0012202662],"category_scores_gemma":[0.00025772981,0.0001310423,0.000154611,0.0006142784,0.0006412498,0.00014258636,0.0005987461,0.00023301765,0.00018512228],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00088186155,0.00038640772,0.8476726,0.00020468073,0.00005518461,0.014590282,0.017094247,0.00013876043,0.08764899,0.0006343973,0.0007207346,0.029971862],"study_design_scores_gemma":[0.000024301582,0.0003755973,0.985816,0.000030833547,0.000021883661,0.0062115123,0.0036715686,0.00011652029,0.0007404443,0.00013907907,0.0028375091,0.000014793224],"about_ca_topic_score_codex":0.01256454,"about_ca_topic_score_gemma":0.021137051,"teacher_disagreement_score":0.01256454,"about_ca_system_score_codex":0.0003851846,"about_ca_system_score_gemma":0.0004250813,"threshold_uncertainty_score":0.02498281},"labels":[],"label_agreement":null},{"id":"W1995917078","doi":"10.3389/fmicb.2015.00331","title":"Editorial on: Bacterial pathogens in the non-clinical environment","year":2015,"lang":"en","type":"editorial","venue":"Frontiers in Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut Universitaire de Cardiologie et de Pneumologie de Québec; Université Laval; McGill University","funders":"","keywords":"Microbiology; Biology; Computational biology","score_opus":0.01011394188513663,"score_gpt":0.28773512169664767,"score_spread":0.277621179811511,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995917078","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000034941084,0.0031427294,0.00008255986,0.018631987,0.9760177,0.000016798378,0.000044342836,0.00005652307,0.001972375],"genre_scores_gemma":[0.0005193976,0.0029200977,0.0000885048,0.012959078,0.96810627,0.000017456407,0.000053894008,0.000031911506,0.015303412],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974017,0.00038487944,0.00031824267,0.0003658597,0.0013053768,0.00022384655],"domain_scores_gemma":[0.9894894,0.0025181407,0.0007890039,0.00029307476,0.004382929,0.0025275336],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00394217,0.003765607,0.0028678894,0.0033063074,0.0024033822,0.0055436282,0.002696875,0.008743591,0.031438813],"category_scores_gemma":[0.013778684,0.0008013135,0.0020332034,0.00096656923,0.0018258543,0.0034660974,0.0013970461,0.009869915,0.02154548],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042840446,0.000010490206,0.000020229447,0.000114539005,0.000008464343,0.00007544446,0.000005320981,0.000017340348,0.00005956344,0.00014815269,0.9952272,0.0042704167],"study_design_scores_gemma":[0.000062536245,0.00003951208,0.00030375784,0.0003110048,0.00003314428,0.0002482315,0.000029145498,0.00012772174,0.00015641273,0.0007606608,0.99791044,0.00001749298],"about_ca_topic_score_codex":0.0008424364,"about_ca_topic_score_gemma":0.0026731829,"teacher_disagreement_score":0.031438813,"about_ca_system_score_codex":0.0022651819,"about_ca_system_score_gemma":0.0016687147,"threshold_uncertainty_score":0.10517323},"labels":[],"label_agreement":null},{"id":"W1996354819","doi":"10.1016/j.biocon.2013.03.008","title":"Food limitation at species range limits: Impacts of food availability on the density and colony expansion of prairie dog populations at their northern periphery","year":2013,"lang":"en","type":"article","venue":"Biological Conservation","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Toronto Zoo; University of Calgary","funders":"","keywords":"Prairie dog; Range (aeronautics); Population density; Ecology; Biology; Population; Vegetation (pathology); Cynomys ludovicianus; Home range; Habitat; Demography","score_opus":0.08430423183855335,"score_gpt":0.2750657777001205,"score_spread":0.19076154586156713,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996354819","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996099,0.000038211685,0.00006192002,0.000008070584,3.7941155e-7,0.0000020774312,0.000018449771,0.0000014222175,0.00025971507],"genre_scores_gemma":[0.9995053,0.000027898452,0.00022165645,0.000012466587,9.564787e-7,0.0000073925653,0.000052805208,0.0000012300584,0.00017033055],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99971586,0.000086774504,0.000012706758,0.000090911846,0.000048641512,0.00004504611],"domain_scores_gemma":[0.999345,0.00018193964,0.00022696325,0.000067143024,0.00006783355,0.00011118109],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041574694,0.00012952568,0.0002370555,0.00031068572,0.0002642575,0.00042750713,0.00028827507,0.00016559876,0.0010168692],"category_scores_gemma":[0.0007082583,0.00014168021,0.0001520091,0.00015591751,0.00048514194,0.0004325989,0.0003951572,0.00024192678,0.00008245068],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013405044,0.0005326908,0.71112067,0.0000863411,0.00011338861,0.0001944445,0.0008443513,0.00066624524,0.2669461,0.00023468513,0.00013844838,0.017782189],"study_design_scores_gemma":[0.0000037696766,0.00028519152,0.9969494,0.000002881603,0.000009211584,0.00004487144,0.00018997943,0.0002656985,0.0020470899,0.0000308471,0.00016883058,0.0000021579121],"about_ca_topic_score_codex":0.006977517,"about_ca_topic_score_gemma":0.028827,"teacher_disagreement_score":0.006977517,"about_ca_system_score_codex":0.0005306701,"about_ca_system_score_gemma":0.00024910684,"threshold_uncertainty_score":0.013873816},"labels":[],"label_agreement":null},{"id":"W1999633588","doi":"10.1016/j.parkreldis.2006.09.004","title":"Félix Vicq D’azyr (1748–1794)","year":2006,"lang":"en","type":"article","venue":"Parkinsonism & Related Disorders","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Opposition (politics); Nobility; Medical school; Medicine; Art; Art history; Humanities; Medical education; Law; Political science; Politics","score_opus":0.002900934894597208,"score_gpt":0.22540203159112757,"score_spread":0.22250109669653037,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999633588","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2327325,0.03801414,0.016046578,0.03580558,0.013415645,0.0005313671,0.0050341845,0.0044571552,0.65396285],"genre_scores_gemma":[0.26370224,0.004916443,0.006941626,0.0039671944,0.0009840626,0.00010927242,0.001510463,0.00023716947,0.7176315],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99979013,0.000033666038,0.000009806968,0.00007272038,0.00004864355,0.0000450571],"domain_scores_gemma":[0.9998522,0.000042122185,0.000022440026,0.000011784073,0.00002338323,0.000048178317],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037562923,0.0009546034,0.00074678153,0.0005295398,0.00078052364,0.00043423442,0.00047405262,0.0011777534,0.15322475],"category_scores_gemma":[0.0005130341,0.00015432012,0.00032529715,0.00020489062,0.00034278017,0.00040184768,0.0006848116,0.00090945273,0.03714161],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034816833,0.00058586727,0.008846847,0.00039705515,0.00024583846,0.014470805,0.00024565306,0.0015114363,0.15695062,0.016686125,0.18313262,0.6134456],"study_design_scores_gemma":[0.00024221759,0.0004566065,0.018797148,0.00007416549,0.000041415744,0.018488608,0.00009513715,0.00087372435,0.013841232,0.00079449784,0.94626915,0.000026158225],"about_ca_topic_score_codex":0.0059853946,"about_ca_topic_score_gemma":0.0039575156,"teacher_disagreement_score":0.15322475,"about_ca_system_score_codex":0.0008501621,"about_ca_system_score_gemma":0.0002863333,"threshold_uncertainty_score":0.51258785},"labels":[],"label_agreement":null},{"id":"W2001274460","doi":"10.1016/j.biocon.2009.10.006","title":"Recent declines in northern tall-grass prairies and effects of patch structure on community persistence","year":2009,"lang":"en","type":"article","venue":"Biological Conservation","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Environment and Climate Change Canada; University of Manitoba","funders":"","keywords":"Species richness; Ecology; Geography; Habitat; Vegetation (pathology); Range (aeronautics); Quadrat; Introduced species; Biology; Shrub","score_opus":0.039429911075955185,"score_gpt":0.29316087798226137,"score_spread":0.2537309669063062,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001274460","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996599,0.000108703956,0.000032005388,0.000022588378,9.189276e-7,0.0000010941203,0.000039007336,0.0000014959943,0.00013426617],"genre_scores_gemma":[0.99959594,0.00007273788,0.00006034278,0.000014460627,0.0000033215033,0.0000021963554,0.00008099792,8.110852e-7,0.00016922582],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99982077,0.00003564015,0.00001231067,0.00006303823,0.000024734789,0.000043467993],"domain_scores_gemma":[0.99888355,0.00017985371,0.00040253773,0.00008680932,0.00019021572,0.00025700423],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006453438,0.0001497837,0.0002721253,0.0005683887,0.00052457635,0.0004660284,0.00047046127,0.0005054761,0.0016028708],"category_scores_gemma":[0.0013210078,0.0001970914,0.0001935746,0.0005174288,0.0007958304,0.0007167069,0.00042189815,0.00038572203,0.0001591782],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034533718,0.00010160149,0.9817718,0.000042070234,0.00010647999,0.00008680447,0.00095765205,0.00020604767,0.0095249815,0.00007590082,0.00011848357,0.006662849],"study_design_scores_gemma":[0.0000011125976,0.000021438938,0.99966407,0.0000010601647,0.0000040415403,0.000017750976,0.00015205074,0.000058990125,0.000027419406,0.000009099852,0.00004237278,6.0916153e-7],"about_ca_topic_score_codex":0.021569794,"about_ca_topic_score_gemma":0.08321714,"teacher_disagreement_score":0.021569794,"about_ca_system_score_codex":0.0005628845,"about_ca_system_score_gemma":0.00029755733,"threshold_uncertainty_score":0.042888463},"labels":[],"label_agreement":null},{"id":"W2001359008","doi":"10.1139/w11-007","title":"Use of protein microarray to identify gene expression changes of<i>Yersinia pestis</i>at different temperatures","year":2011,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Natural Science Foundation of China","keywords":"Yersinia pestis; Virulence; Biology; Microarray; Gene; Microbiology; Gene expression profiling; Microarray analysis techniques; Plague (disease); Gene expression; Antigen; Antibody; Molecular biology; Genetics","score_opus":0.03109873350897979,"score_gpt":0.2603008112907642,"score_spread":0.22920207778178442,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001359008","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97625136,0.00092179823,0.0191762,0.00018465455,0.00004838184,0.00007025935,0.0017819969,0.00020403328,0.0013612581],"genre_scores_gemma":[0.9283564,0.002162751,0.05986766,0.00025791238,0.000043467797,0.00041784378,0.0042949175,0.000050221388,0.004548848],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997842,0.000028428047,0.000013953297,0.000076629774,0.000060440714,0.00003635559],"domain_scores_gemma":[0.99991524,0.000023605862,0.000019032348,0.00000606694,0.000022607035,0.000013366611],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001759077,0.0004304986,0.0004305224,0.00040104132,0.00025139164,0.00030893684,0.00018646316,0.00030398928,0.00062937185],"category_scores_gemma":[0.0001555144,0.00017106971,0.0002601651,0.0004746658,0.00015704194,0.00022447137,0.00014436858,0.00038783828,0.00022456233],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030800475,0.0000102986405,0.00022040369,0.0000133663425,0.000002868034,0.000006210173,0.000006033566,0.000021315096,0.99927646,0.000008866273,0.000011140872,0.00039226285],"study_design_scores_gemma":[0.000007778807,0.0003715153,0.03487514,0.000006432457,0.000037759637,0.00018805263,0.00005423203,0.0023626946,0.9607127,0.000059938084,0.0013109848,0.0000127186295],"about_ca_topic_score_codex":0.0007722287,"about_ca_topic_score_gemma":0.0011456115,"teacher_disagreement_score":0.0007722287,"about_ca_system_score_codex":0.00025415616,"about_ca_system_score_gemma":0.00015413424,"threshold_uncertainty_score":0.0021054149},"labels":[],"label_agreement":null},{"id":"W2001637434","doi":"10.1139/z07-083","title":"Genetic structure of black rat populations in a rural plague focus in Madagascar","year":2007,"lang":"en","type":"article","venue":"Canadian Journal of Zoology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Biology; Plague (disease); Flea; Ecology; Habitat; Population; Zoology; Geography; Demography","score_opus":0.013139628190091577,"score_gpt":0.2729539741335518,"score_spread":0.25981434594346026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001637434","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9999273,0.0000128292,0.00001203165,0.0000031004238,1.7277e-7,0.0000011664762,0.000008896925,6.444701e-7,0.000033855154],"genre_scores_gemma":[0.99984384,0.000020412306,0.000046586618,0.000003773921,7.9116694e-7,0.0000034687569,0.00003571123,4.4345666e-7,0.000044896562],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998405,0.00004577834,0.00000721205,0.000052068488,0.000019375784,0.000034928402],"domain_scores_gemma":[0.9997466,0.000044997425,0.00012311184,0.000016085125,0.000020195037,0.000049059738],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001686214,0.00021123764,0.00014545937,0.0011504177,0.0003302805,0.0002863,0.00022712196,0.00014825237,0.00075090304],"category_scores_gemma":[0.00049197645,0.00013354272,0.000120393706,0.00048817278,0.0004979097,0.00011354263,0.00033968384,0.00013298866,0.000056497985],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029673846,0.00006147329,0.9661687,0.000018996758,0.000093148854,0.00039003356,0.0025878248,0.00015039767,0.021767141,0.00008276089,0.000060316892,0.008322447],"study_design_scores_gemma":[0.0000045908146,0.00007675278,0.999111,0.0000029417183,0.00000984452,0.00011765667,0.0003927659,0.00011006141,0.00009837308,0.000010106474,0.00006348173,0.0000024190554],"about_ca_topic_score_codex":0.016143538,"about_ca_topic_score_gemma":0.02418026,"teacher_disagreement_score":0.016143538,"about_ca_system_score_codex":0.00026740914,"about_ca_system_score_gemma":0.000121294936,"threshold_uncertainty_score":0.032099128},"labels":[],"label_agreement":null},{"id":"W2002999294","doi":"10.1074/jbc.r300012200","title":"Bacterial Injection Machines","year":2003,"lang":"en","type":"review","venue":"Journal of Biological Chemistry","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Secretion; Type three secretion system; Virulence; Effector; Yersinia; Biology; Microbiology; Type VI secretion system; Enteropathogenic Escherichia coli; Pathogenicity island; Bacteria; Cell biology; Genetics; Gene; Biochemistry","score_opus":0.047788136889370426,"score_gpt":0.34947906881614743,"score_spread":0.301690931926777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002999294","genre_codex":"other","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.044209287,0.11154261,0.2517085,0.012040306,0.017639814,0.0011406189,0.003099399,0.021051576,0.5375678],"genre_scores_gemma":[0.34992862,0.08859077,0.13591246,0.0077320263,0.00375746,0.0015064869,0.00610799,0.0023296294,0.40413463],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988158,0.00015347023,0.00007631923,0.00027147177,0.00046162657,0.00022132046],"domain_scores_gemma":[0.9992367,0.0001629089,0.00012137783,0.00014466484,0.00020335357,0.00013104413],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007172447,0.0012892116,0.0012047711,0.0014416999,0.0018157475,0.0043468517,0.0015024164,0.0032500604,0.03815417],"category_scores_gemma":[0.0019952557,0.00085285475,0.0012248923,0.0010463145,0.0014312718,0.0053090844,0.003079703,0.0022280377,0.030225545],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005625638,0.00017381221,0.001186859,0.0026437978,0.00006882825,0.0012518383,0.0009089494,0.0022199599,0.12692097,0.43036115,0.11106589,0.3226354],"study_design_scores_gemma":[0.000042597083,0.00017091563,0.00034264868,0.00029422445,0.000027046237,0.0009761083,0.000111247056,0.0029585569,0.04512202,0.027784584,0.9221141,0.00005606553],"about_ca_topic_score_codex":0.0003607233,"about_ca_topic_score_gemma":0.00026550508,"teacher_disagreement_score":0.03815417,"about_ca_system_score_codex":0.0014690679,"about_ca_system_score_gemma":0.0010131202,"threshold_uncertainty_score":0.12763834},"labels":[],"label_agreement":null},{"id":"W2006007480","doi":"10.7589/0090-3558-41.2.463","title":"Mortality of Geese as a Result of Collision with the Ground","year":2005,"lang":"en","type":"article","venue":"Journal of Wildlife Diseases","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Environment and Climate Change Canada; University of Saskatchewan","funders":"","keywords":"Flock; Branta; Snow; Biology; Waterfowl; Ecology; Zoology; Goose; Fishery; Geography; Meteorology; Habitat","score_opus":0.011023139768436427,"score_gpt":0.3012789839093258,"score_spread":0.29025584414088934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006007480","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995497,0.000101011836,0.000047005156,0.00002119234,0.0000059191334,0.000003939689,0.00004082773,0.000004782447,0.00022558107],"genre_scores_gemma":[0.9992285,0.00018584164,0.000068208545,0.000043895012,0.0000066362245,0.0000038024482,0.00015611632,0.0000016580992,0.00030532997],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997261,0.000064939224,0.000021197395,0.000039585408,0.000055935805,0.000092222115],"domain_scores_gemma":[0.9992619,0.00007547385,0.00021332999,0.00008746574,0.00013747269,0.00022433056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039402177,0.0003451535,0.00019879834,0.0006108979,0.0005465713,0.00048025118,0.00023381259,0.0006115734,0.00068437844],"category_scores_gemma":[0.00097593473,0.00018040313,0.0003150594,0.00024520812,0.00042078475,0.00016939978,0.00048250603,0.0003837413,0.0002871214],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002012545,0.00004280818,0.9919912,0.000009921968,0.00006436334,0.0018648206,0.00044312445,0.00008144952,0.0019374596,0.000016511738,0.00021853138,0.0031285223],"study_design_scores_gemma":[0.000011159792,0.0007692576,0.991091,0.000011079654,0.00002892974,0.005765005,0.0007876484,0.00025736005,0.0005383431,0.000028437884,0.0007017733,0.000009980045],"about_ca_topic_score_codex":0.013848663,"about_ca_topic_score_gemma":0.026067544,"teacher_disagreement_score":0.013848663,"about_ca_system_score_codex":0.00043656302,"about_ca_system_score_gemma":0.0002868374,"threshold_uncertainty_score":0.027536094},"labels":[],"label_agreement":null},{"id":"W2016360888","doi":"10.1023/b:sypa.0000010680.66684.33","title":"Some comments on the genus Lernaeopodina Wilson, 1915 (Copepoda: Siphonostomatoida: Lernaeopodidae)","year":2004,"lang":"en","type":"article","venue":"Systematic Parasitology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Fisheries and Oceans Canada","funders":"","keywords":"Animal ecology; Biology; Genus; Zoology","score_opus":0.019848899186664323,"score_gpt":0.30014589683336285,"score_spread":0.2802969976466985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016360888","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011338996,0.040652934,0.010977196,0.4647998,0.39855292,0.0002925085,0.0010704945,0.0006029687,0.07171218],"genre_scores_gemma":[0.095678784,0.025812667,0.017660156,0.44704175,0.27483958,0.0005076854,0.0012232914,0.00037881092,0.13685729],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9991856,0.00022864778,0.00011748987,0.00012681725,0.00023893554,0.00010247101],"domain_scores_gemma":[0.9958038,0.0010200884,0.0006410775,0.00019986347,0.0017825159,0.0005527045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017909305,0.0012005521,0.00085347175,0.0009792761,0.0031814747,0.0013288251,0.003314161,0.0039647683,0.0108109405],"category_scores_gemma":[0.0069906455,0.0004625661,0.00078651984,0.0011241667,0.004106252,0.0034152758,0.0017664429,0.006304818,0.007325448],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002509793,0.000047123718,0.003014621,0.0009572038,0.000070650465,0.0022133526,0.0017858644,0.0004221833,0.008326088,0.011835237,0.9099914,0.061085224],"study_design_scores_gemma":[0.000014497413,0.000053071835,0.00545303,0.00027507913,0.000019926398,0.00067119894,0.00066855317,0.00013817474,0.0004805052,0.00271749,0.98947597,0.00003253635],"about_ca_topic_score_codex":0.017506188,"about_ca_topic_score_gemma":0.035859644,"teacher_disagreement_score":0.017506188,"about_ca_system_score_codex":0.0016615521,"about_ca_system_score_gemma":0.0009248908,"threshold_uncertainty_score":0.03616619},"labels":[],"label_agreement":null},{"id":"W2020503025","doi":"10.1139/w99-125","title":"Studies on the interactions of immunostimulated macrophages and<i>Yersinia enterocolitica</i>O:8","year":2000,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Yersinia enterocolitica; Microbiology; Macrophage; Biology; Cytoplasm; Phagocytosis; In vivo; Yersinia; In vitro; Enterobacteriaceae; Escherichia coli; Molecular biology; Chemistry; Bacteria; Cell biology; Biochemistry; Gene","score_opus":0.01701881876064312,"score_gpt":0.2846901370097004,"score_spread":0.2676713182490573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020503025","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99697256,0.00096916396,0.0011109596,0.000028802675,0.000014466178,0.000022442671,0.00009726495,0.000012427173,0.00077191927],"genre_scores_gemma":[0.9947196,0.00082278135,0.0025115116,0.00004017512,0.00001693643,0.000052469197,0.00028642852,0.000009356861,0.0015407648],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979573,0.00004788588,0.000012841663,0.000031071388,0.000038681064,0.000073676856],"domain_scores_gemma":[0.9998629,0.000038966915,0.000029986215,0.000011827276,0.000035978515,0.000020242702],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025035403,0.0005185518,0.0002951563,0.00013202259,0.0001390553,0.00015215515,0.00016204672,0.0002924312,0.0006946325],"category_scores_gemma":[0.00017313573,0.0000999105,0.00026776324,0.000112079135,0.00020134253,0.00018866303,0.00018725226,0.0002665912,0.00024743262],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017967171,0.000025525578,0.00043209305,0.000048524802,0.000004167493,0.000086238346,0.000023266697,0.000024909776,0.99852294,0.000033427383,0.000006641241,0.00061267964],"study_design_scores_gemma":[0.000015958643,0.0016074426,0.0079736365,0.000008873629,0.000022544198,0.00047264632,0.000072859046,0.0002473991,0.9883812,0.00003257641,0.0011593591,0.000005530286],"about_ca_topic_score_codex":0.00030975853,"about_ca_topic_score_gemma":0.0003053533,"teacher_disagreement_score":0.0006946325,"about_ca_system_score_codex":0.00013523808,"about_ca_system_score_gemma":0.00015360281,"threshold_uncertainty_score":0.0023238063},"labels":[],"label_agreement":null},{"id":"W2023157760","doi":"10.4161/gmic.1.2.11685","title":"The bacterial virulence factor NleA's involvement in intestinal tight junction disruption during Enteropathogenic<i>E. coli</i>infection is independent of its putative PDZ binding domain","year":2010,"lang":"en","type":"article","venue":"Gut Microbes","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"PDZ domain; Biology; Tight junction; Enteropathogenic Escherichia coli; Effector; Cell biology; Virulence; Type three secretion system; Secretion; Claudin; Microbiology; Genetics; Gene; Biochemistry","score_opus":0.010123960179572808,"score_gpt":0.2662841675042013,"score_spread":0.2561602073246285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023157760","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984596,0.00031663472,0.0008893928,0.000037361402,0.0000056467666,0.000004849672,0.00004211542,0.000014134517,0.00023037358],"genre_scores_gemma":[0.9986401,0.0001293965,0.0006778713,0.00001808951,0.000001739466,0.000005053677,0.00015375613,0.0000045806587,0.00036930287],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988675,0.000027464044,0.000011930763,0.00001906618,0.000024823623,0.000029935552],"domain_scores_gemma":[0.9998853,0.000023763809,0.000038731265,0.000015887701,0.000009770707,0.000026502885],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011367936,0.00023307651,0.00016510543,0.00010789491,0.000120930454,0.00025899004,0.00013466891,0.0002562477,0.00052567554],"category_scores_gemma":[0.00016675102,0.00009801945,0.00022009121,0.00008586651,0.0002798092,0.00019485531,0.00018876018,0.00043600117,0.00018875209],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008535272,0.0000142482095,0.00023681569,0.0000100183115,0.0000026117484,0.00007330829,0.0000051040543,0.000023109622,0.99923456,0.0000338317,0.000005462576,0.00027545448],"study_design_scores_gemma":[0.000012983227,0.00018608145,0.012358892,0.0000034722573,0.0000142999625,0.00083718606,0.000033943616,0.00061714783,0.9853774,0.0000346846,0.000519866,0.000004013835],"about_ca_topic_score_codex":0.00044556358,"about_ca_topic_score_gemma":0.00036988183,"teacher_disagreement_score":0.00052567554,"about_ca_system_score_codex":0.0002605208,"about_ca_system_score_gemma":0.00011213985,"threshold_uncertainty_score":0.0018901825},"labels":[],"label_agreement":null},{"id":"W2027318823","doi":"10.1016/s0140-6736(09)61100-4","title":"Plague, arsenic, and a dried toad","year":2009,"lang":"en","type":"article","venue":"The Lancet","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Plague (disease); Witness; History; Population; Quarter (Canadian coin); Ancient history; Outbreak; Battle; Medicine; Law; Genealogy; Demography; Sociology; Virology; Archaeology; Political science","score_opus":0.02053812826354776,"score_gpt":0.2990446466999797,"score_spread":0.2785065184364319,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027318823","genre_codex":"review","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.30594712,0.42205864,0.0007851973,0.15689087,0.00947235,0.000065000815,0.0014535519,0.0002340256,0.10309327],"genre_scores_gemma":[0.73801297,0.1355939,0.0010786761,0.0244136,0.0035158896,0.000013571822,0.000279745,0.000021784557,0.097069934],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99981755,0.000064197164,0.000012732094,0.000016894619,0.00006596149,0.000022683194],"domain_scores_gemma":[0.9998677,0.000031651703,0.000036030015,0.000010125768,0.000032029933,0.000022466304],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003659954,0.0002573956,0.000149519,0.00091050577,0.00076812087,0.00073970406,0.0001573327,0.00108892,0.0057595093],"category_scores_gemma":[0.00063858344,0.00014198897,0.00022002259,0.00056424725,0.00084687833,0.00054952974,0.00033941877,0.0004745405,0.00063935533],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007898509,0.00085010193,0.08438154,0.0033391502,0.0006119149,0.010899213,0.004572708,0.00047104183,0.07789605,0.066866465,0.20672737,0.53548604],"study_design_scores_gemma":[0.000163361,0.0016879878,0.07308183,0.0006675386,0.00040381367,0.008285707,0.0073019015,0.0001389914,0.016561884,0.018520268,0.8731253,0.00006148043],"about_ca_topic_score_codex":0.007782613,"about_ca_topic_score_gemma":0.022332983,"teacher_disagreement_score":0.007782613,"about_ca_system_score_codex":0.00054034294,"about_ca_system_score_gemma":0.0006350257,"threshold_uncertainty_score":0.0192675},"labels":[],"label_agreement":null},{"id":"W2029027620","doi":"10.1007/s11252-013-0305-4","title":"The secret life of the city rat: a review of the ecology of urban Norway and black rats (Rattus norvegicus and Rattus rattus)","year":2013,"lang":"en","type":"review","venue":"Urban Ecosystems","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":318,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Government of British Columbia; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Urban ecology; Ecology; Urban ecosystem; Biology; Habitat; Population ecology; Population; Geography; Urbanization; Sociology","score_opus":0.022515723568847307,"score_gpt":0.28283436451356114,"score_spread":0.26031864094471385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029027620","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009027704,0.9994361,0.00004569646,0.000108251064,0.00010037964,0.0000012703827,0.000017464388,0.0000023546434,0.00019822622],"genre_scores_gemma":[0.0004207466,0.9990932,0.000109369714,0.000091140646,0.00009481585,0.0000017141413,0.000022324095,5.2811976e-7,0.00016617354],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99984574,0.000023173958,0.000029374303,0.000033628767,0.000052439467,0.00001571563],"domain_scores_gemma":[0.9996105,0.00016615626,0.000074175994,0.000009716124,0.00009394644,0.000045643887],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048280144,0.00083101337,0.0013669899,0.003136119,0.0002903839,0.0010186038,0.0008263301,0.000956063,0.0016998063],"category_scores_gemma":[0.00074978935,0.00025850034,0.00038961798,0.003812273,0.0005792555,0.0015383587,0.0006821622,0.0011447503,0.0006247337],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000102750644,0.000063327294,0.00048404254,0.028421644,0.00013117066,0.00023216046,0.000107292944,0.00031365477,0.0023193837,0.0022285576,0.032383226,0.9332128],"study_design_scores_gemma":[0.000013842883,0.000112026835,0.0020639217,0.006229984,0.00022034172,0.0013169346,0.0001511217,0.00006736437,0.00042045998,0.0012778642,0.98809063,0.000035431764],"about_ca_topic_score_codex":0.0025970715,"about_ca_topic_score_gemma":0.005962476,"teacher_disagreement_score":0.003136119,"about_ca_system_score_codex":0.000542332,"about_ca_system_score_gemma":0.0012168405,"threshold_uncertainty_score":0.0056864023},"labels":[],"label_agreement":null},{"id":"W2032051433","doi":"10.1353/hub.2003.0050","title":"Hypersensitive PCR, Ancient Human mtDNA, and Contamination","year":2003,"lang":"en","type":"article","venue":"Human Biology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Mitochondrial DNA; Ancient DNA; Polymerase chain reaction; Biology; DNA; Polymerase; DNA polymerase; Real-time polymerase chain reaction; Molecular biology; Multiple displacement amplification; Genetics; Gene; DNA extraction; Population; Medicine","score_opus":0.023332721347948216,"score_gpt":0.31284296639905235,"score_spread":0.2895102450511041,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032051433","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8568024,0.008300453,0.12893508,0.00032504593,0.00016589455,0.00010093171,0.00016289436,0.00046015403,0.0047472552],"genre_scores_gemma":[0.9233959,0.0025553792,0.06900386,0.00033473392,0.000053107124,0.00010840013,0.00046757516,0.00006981985,0.004011383],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987062,0.00041993032,0.00013883814,0.00044993704,0.00021637838,0.000068814734],"domain_scores_gemma":[0.9975274,0.0013880811,0.0005260288,0.0002485421,0.00017908786,0.00013080724],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012037003,0.0004912653,0.000273318,0.0008725534,0.0002376704,0.0004196919,0.00042152707,0.0006682968,0.0017084316],"category_scores_gemma":[0.0023891986,0.0004897037,0.00017369611,0.00045420075,0.0012017344,0.00059258624,0.00047969213,0.0006066493,0.00045144916],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001765515,0.000034038705,0.006746352,0.00020185017,0.000015129769,0.00046013296,0.00017251137,0.00011680944,0.98309785,0.00067043863,0.00007406592,0.008234368],"study_design_scores_gemma":[0.000018496994,0.0005019316,0.02593552,0.000053892218,0.00005951988,0.0044293683,0.0001848815,0.0015333187,0.9620559,0.001742765,0.0034622713,0.000022114877],"about_ca_topic_score_codex":0.00019497426,"about_ca_topic_score_gemma":0.00043542357,"teacher_disagreement_score":0.0017084316,"about_ca_system_score_codex":0.00021010514,"about_ca_system_score_gemma":0.00016274929,"threshold_uncertainty_score":0.0063658357},"labels":[],"label_agreement":null},{"id":"W2033384170","doi":"10.1007/s00300-014-1573-z","title":"First confirmed record of a leucistic Antarctic fur seal pup born outside the Scotia Arc Islands","year":2014,"lang":"en","type":"article","venue":"Polar Biology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Fur seal; Biology; Nova scotia; Population; Seal (emblem); Zoology; Demography; Archaeology; Geography","score_opus":0.012288733304692333,"score_gpt":0.27344225566094665,"score_spread":0.26115352235625433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033384170","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933082,0.00028015146,0.0002455813,0.00021797462,0.00010621816,0.000022897495,0.00034118112,0.000014064999,0.0054637804],"genre_scores_gemma":[0.9959484,0.00023231894,0.0003991115,0.00018111472,0.000039106322,0.0000086575,0.0002004006,0.000005160969,0.0029857196],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.9998665,0.000016957272,0.0000073807505,0.0000416143,0.00002898239,0.000038530565],"domain_scores_gemma":[0.99931276,0.0001318089,0.00008902245,0.000097250246,0.00016179102,0.00020748125],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017442655,0.00025864234,0.00017765332,0.00039254478,0.0017095894,0.00041527796,0.00040823748,0.0008054785,0.0027453941],"category_scores_gemma":[0.0007432543,0.00022221224,0.00020863887,0.0001683096,0.0007128022,0.0003170971,0.00059039635,0.00083004386,0.00058722973],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008839811,0.00019090142,0.84707725,0.0001897664,0.00014823937,0.069713205,0.011478914,0.00015154101,0.04222889,0.0012808616,0.0039262073,0.022730183],"study_design_scores_gemma":[0.000013353563,0.00097236334,0.94504267,0.00011143682,0.00006112066,0.02654062,0.0051524746,0.00010927633,0.003483565,0.000137951,0.018354636,0.000020409074],"about_ca_topic_score_codex":0.023086967,"about_ca_topic_score_gemma":0.05292908,"teacher_disagreement_score":0.023086967,"about_ca_system_score_codex":0.0006676465,"about_ca_system_score_gemma":0.0005527228,"threshold_uncertainty_score":0.045905173},"labels":[],"label_agreement":null},{"id":"W2035251516","doi":"10.1016/j.ijmm.2015.03.009","title":"Current activities of the Yersinia effector protein YopM","year":2015,"lang":"en","type":"review","venue":"International Journal of Medical Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"AllerGen; Deutsche Forschungsgemeinschaft","keywords":"Effector; Biology; Yersinia; Virulence; Secretion; Microbiology; Yersinia pseudotuberculosis; Type three secretion system; Cell biology; Bacteria; Genetics; Gene; Biochemistry","score_opus":0.031387267655906693,"score_gpt":0.39161794393890315,"score_spread":0.36023067628299643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035251516","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001996068,0.9988631,0.00011470699,0.00017102166,0.00013106898,0.0000025930706,0.00002428596,0.0000061480932,0.00048741966],"genre_scores_gemma":[0.001324508,0.9975817,0.00018908433,0.00014112577,0.00018070207,0.000004563997,0.000072281,0.0000011944464,0.0005047835],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99985313,0.000019111485,0.000021389196,0.000028963988,0.00005485695,0.000022633392],"domain_scores_gemma":[0.99973744,0.000094140894,0.000056123296,0.000007595216,0.00007210499,0.000032539898],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000603779,0.0007656639,0.0011659036,0.0014690204,0.00020347702,0.0010413523,0.00061386114,0.00074608694,0.0024604017],"category_scores_gemma":[0.00079032825,0.0002834844,0.0003111707,0.0019656108,0.00040808416,0.0011590553,0.00080111047,0.0012537964,0.0013065402],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025889304,0.000045400648,0.0003062433,0.02136962,0.00008014383,0.00020904504,0.000066021275,0.00038681636,0.010470565,0.003128055,0.02497831,0.93870085],"study_design_scores_gemma":[0.00002555913,0.00013211426,0.0012150554,0.0019576822,0.00013671289,0.00078358204,0.000058298017,0.00013069766,0.0025507521,0.0013388668,0.99165076,0.000019929328],"about_ca_topic_score_codex":0.0006007677,"about_ca_topic_score_gemma":0.0008394355,"teacher_disagreement_score":0.0024604017,"about_ca_system_score_codex":0.0005368817,"about_ca_system_score_gemma":0.0010030756,"threshold_uncertainty_score":0.008230805},"labels":[],"label_agreement":null},{"id":"W2037380474","doi":"10.1016/j.ijpp.2013.07.004","title":"Contributions of ectoparasite studies in archaeology with two examples from the North Atlantic region","year":2013,"lang":"en","type":"article","venue":"International Journal of Paleopathology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Memorial University of Newfoundland","funders":"University of Aberdeen; Commonwealth Scholarship Commission; Université Laval","keywords":"Domestication; Archaeology; Geography; Zooarchaeology; Archaeological record; Wool; Ecology; Biology; Zoology","score_opus":0.028790714875001542,"score_gpt":0.3392928109839929,"score_spread":0.3105020961089913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037380474","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9531036,0.0119714355,0.0021985823,0.0019046568,0.00015853479,0.000039973896,0.00024224211,0.000012990327,0.030367935],"genre_scores_gemma":[0.9750147,0.013194959,0.004622015,0.0005434747,0.00014758842,0.000016049666,0.0002686633,0.000021031961,0.006171497],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99967694,0.000064809574,0.000028240396,0.0000463876,0.00009314227,0.000090464724],"domain_scores_gemma":[0.9991424,0.00020436883,0.0001275784,0.00008631976,0.0003247403,0.000114659655],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007396822,0.00039977653,0.0002664136,0.0016308592,0.002371289,0.0014631101,0.00032370456,0.00050219835,0.001038309],"category_scores_gemma":[0.0010346058,0.00012292294,0.00024520134,0.0014739634,0.0010234256,0.00043739384,0.0019329378,0.0005883852,0.00022857204],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007579517,0.00016874957,0.6833658,0.0006066668,0.00014446818,0.008521783,0.032898884,0.00026218966,0.059697542,0.0028912686,0.0009153191,0.20976934],"study_design_scores_gemma":[0.000010444931,0.000111415044,0.93059,0.0002804684,0.00009043943,0.0054012253,0.021591112,0.00012976985,0.0044261077,0.0005598885,0.03678673,0.000022377477],"about_ca_topic_score_codex":0.055933964,"about_ca_topic_score_gemma":0.19952834,"teacher_disagreement_score":0.055933964,"about_ca_system_score_codex":0.0011620313,"about_ca_system_score_gemma":0.0015312283,"threshold_uncertainty_score":0.11121678},"labels":[],"label_agreement":null},{"id":"W2039129179","doi":"10.1186/1471-2164-14-489","title":"Defining natural species of bacteria: clear-cut genomic boundaries revealed by a turning point in nucleotide sequence divergence","year":2013,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Specialized Research Fund for the Doctoral Program of Higher Education of China; National Institutes of Health; Natural Science Foundation of Heilongjiang Province; National Natural Science Foundation of China","keywords":"Biology; Genetics; Divergence (linguistics); Turning point; Evolutionary biology; Nucleic acid sequence; Computational biology; Gene","score_opus":0.013486897571006346,"score_gpt":0.2484152138877513,"score_spread":0.23492831631674496,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039129179","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945781,0.00022501632,0.004519744,0.00001964643,0.000003337704,0.00001303754,0.00008283045,0.000014353719,0.0005438833],"genre_scores_gemma":[0.9957054,0.00005089189,0.004002232,0.000018133796,0.0000024381302,0.000012101089,0.00016627571,0.0000058459427,0.00003656998],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9995907,0.00009279875,0.000048824986,0.00013686674,0.00007234021,0.000058468522],"domain_scores_gemma":[0.99783283,0.0006939968,0.0008386586,0.00019072641,0.00018857361,0.00025529732],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00060960965,0.00013593935,0.00022778014,0.00093686103,0.00037326128,0.0006795867,0.00029074706,0.0005598742,0.0006105204],"category_scores_gemma":[0.0019773243,0.00017568274,0.00015686116,0.00059454254,0.0010865337,0.00065072783,0.00075452536,0.00054972066,0.00020881358],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00080092443,0.00010812749,0.124029,0.00031211818,0.000092614755,0.0004095394,0.0012276156,0.0010669662,0.8572993,0.003908264,0.00010858194,0.010636943],"study_design_scores_gemma":[0.00007649497,0.0010560048,0.7764524,0.0001246101,0.00016657922,0.005182533,0.002111193,0.011104313,0.18381022,0.0152643975,0.004559737,0.00009153434],"about_ca_topic_score_codex":0.00014536091,"about_ca_topic_score_gemma":0.0002868412,"teacher_disagreement_score":0.00093686103,"about_ca_system_score_codex":0.00027071626,"about_ca_system_score_gemma":0.00017857175,"threshold_uncertainty_score":0.0032239556},"labels":[],"label_agreement":null},{"id":"W2041418790","doi":"10.1371/journal.pcbi.1003039","title":"Host Resistance, Population Structure and the Long-Term Persistence of Bubonic Plague: Contributions of a Modelling Approach in the Malagasy Focus","year":2013,"lang":"en","type":"article","venue":"PLoS Computational Biology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Okanagan University College; University of British Columbia, Okanagan Campus; University of British Columbia","funders":"Wellcome Trust; National Science Foundation","keywords":"Plague (disease); Metapopulation; Yersinia pestis; Persistence (discontinuity); Biology; Host (biology); Population; Extinction (optical mineralogy); Zoonosis; Ecology; Susceptible individual; Zoology; Geography; Virulence; Biological dispersal; Demography; Virology; Genetics","score_opus":0.01662678251656458,"score_gpt":0.2585530358621335,"score_spread":0.24192625334556894,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041418790","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9499411,0.0015894149,0.039298315,0.0029923476,0.000046079833,0.000034146873,0.00036144358,0.00008487609,0.00565225],"genre_scores_gemma":[0.99380034,0.0007159115,0.004116996,0.00012348077,0.000055936933,0.000046872978,0.000093391835,0.000021594424,0.0010254822],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99977523,0.00014464979,0.000009211497,0.000032031494,0.00001026414,0.000028714516],"domain_scores_gemma":[0.9984303,0.0011849129,0.0002126483,0.00004315481,0.000050036542,0.00007888491],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000660113,0.00067495817,0.00065678085,0.0008266868,0.0006774269,0.0015719644,0.0010835092,0.0012443187,0.0019240453],"category_scores_gemma":[0.0034403868,0.00033709596,0.00073211634,0.0006158213,0.0008526114,0.001016123,0.0011441109,0.000690452,0.00008768099],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044995795,0.000060247155,0.01666101,0.00007354204,0.0001583121,0.00025507857,0.00017639868,0.96035093,0.00087484927,0.018203914,0.0003441942,0.0027965861],"study_design_scores_gemma":[0.000013703196,0.000026222126,0.003590873,0.000013349595,0.000045747336,0.000033655393,0.000068697875,0.991159,0.000048521204,0.0045685032,0.00041904836,0.0000126370805],"about_ca_topic_score_codex":0.030093867,"about_ca_topic_score_gemma":0.014338492,"teacher_disagreement_score":0.030093867,"about_ca_system_score_codex":0.001007749,"about_ca_system_score_gemma":0.0007697685,"threshold_uncertainty_score":0.0598374},"labels":[],"label_agreement":null},{"id":"W2041629085","doi":"10.1159/000219935","title":"The Affinity for Monkey Tissue of Five Antibiotics Having Erythromycin-Like Spectra","year":2009,"lang":"en","type":"article","venue":"Chemotherapia","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"","keywords":"Erythromycin; Antibiotics; Microbiology; Chemistry; Biology","score_opus":0.01110983894912116,"score_gpt":0.29632411880271625,"score_spread":0.2852142798535951,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041629085","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9815045,0.0058917617,0.0017628814,0.00014545949,0.000040182476,0.000016429572,0.0003077205,0.000034018427,0.01029713],"genre_scores_gemma":[0.991471,0.0014455224,0.00078627263,0.00006154362,0.0000210305,0.000012481971,0.0009038118,0.00001710867,0.0052812677],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998272,0.00003805752,0.000006687521,0.000044223765,0.000018186058,0.00006565373],"domain_scores_gemma":[0.9996251,0.00020663206,0.000028739543,0.000023670103,0.000052355896,0.00006360356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023572212,0.0002851031,0.00024888822,0.00031972898,0.00031786226,0.0004203187,0.00029178732,0.0004813647,0.004244684],"category_scores_gemma":[0.00047600447,0.00020526157,0.00020755708,0.00022137733,0.00028673816,0.00037024432,0.00024561665,0.00050175004,0.0010551071],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006666564,0.000016573385,0.0009336321,0.00009225258,0.000015943988,0.00006448509,0.000057188572,0.00007407028,0.99539775,0.00019948004,0.000084702966,0.0023972602],"study_design_scores_gemma":[0.000027113552,0.001703423,0.02829649,0.00003287731,0.00008448687,0.0009799605,0.00031782157,0.0011997628,0.95945126,0.00025614706,0.0076260446,0.000024621431],"about_ca_topic_score_codex":0.0031977969,"about_ca_topic_score_gemma":0.0029704731,"teacher_disagreement_score":0.004244684,"about_ca_system_score_codex":0.0003884166,"about_ca_system_score_gemma":0.0003309027,"threshold_uncertainty_score":0.014199913},"labels":[],"label_agreement":null},{"id":"W2047305326","doi":"10.7202/201116ar","title":"Les médecins de Charles Guérin face au choléra","year":2006,"lang":"fr","type":"article","venue":"Voix et Images","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Université du Québec à Montréal","funders":"","keywords":"Humanities; Art","score_opus":0.017379217637235527,"score_gpt":0.31588841922470906,"score_spread":0.2985092015874735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047305326","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.036347564,0.30165383,0.0005543241,0.52373636,0.026044149,0.000068957444,0.00020984342,0.00012662259,0.111258395],"genre_scores_gemma":[0.22887619,0.15199983,0.0010608803,0.11815628,0.018822445,0.00006346909,0.00010996227,0.000073953706,0.48083705],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99945766,0.00017993615,0.000017331417,0.00009274198,0.00012812951,0.0001242817],"domain_scores_gemma":[0.99920803,0.00021867207,0.00008159428,0.000018230761,0.0002000186,0.00027352417],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001010451,0.0004931234,0.0003112508,0.00073952466,0.004227256,0.002862763,0.0004386659,0.0037598854,0.0094695],"category_scores_gemma":[0.001552504,0.00034542521,0.00017173162,0.0006693629,0.005390352,0.0009923356,0.0020303917,0.004400395,0.0016209285],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043665728,0.000072639625,0.0054698084,0.0010863245,0.00003401419,0.003671256,0.025445955,0.00047067422,0.005324722,0.0651933,0.76349473,0.12929995],"study_design_scores_gemma":[0.000004140036,0.000022583197,0.0020624346,0.00012917296,0.000002316711,0.00018590158,0.00090665073,0.000009504159,0.00010665355,0.0007207253,0.9958438,0.000006085563],"about_ca_topic_score_codex":0.20196906,"about_ca_topic_score_gemma":0.23993015,"teacher_disagreement_score":0.20196906,"about_ca_system_score_codex":0.008420364,"about_ca_system_score_gemma":0.006220081,"threshold_uncertainty_score":0.40158695},"labels":[],"label_agreement":null},{"id":"W2049244952","doi":"10.1371/journal.pone.0021733","title":"Molecular Identification of Bacteria by Total Sequence Screening: Determining the Cause of Death in Ancient Human Subjects","year":2011,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institut Polaire Français Paul Emile Victor; Centre National de la Recherche Scientifique; Ministère des Affaires Etrangères; Polar Knowledge Canada","keywords":"rpoB; Ancient DNA; Biology; 16S ribosomal RNA; Polymerase chain reaction; DNA sequencing; Streptococcus pneumoniae; Ribosomal DNA; Human pathogen; Genetics; Gene; Microbiology; Bacteria; Phylogenetics; Population","score_opus":0.09089183061324413,"score_gpt":0.2976076526444434,"score_spread":0.20671582203119926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049244952","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996822,0.0007012895,0.0016869372,0.000015603642,0.0000068765744,0.000021731712,0.00026582877,0.000011404387,0.0004683671],"genre_scores_gemma":[0.9942304,0.0009219655,0.0034715997,0.000029190645,0.00001242229,0.000024205758,0.0005477949,0.0000053251906,0.0007571023],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996737,0.000055195,0.00003743906,0.000086784836,0.00010147907,0.000045372475],"domain_scores_gemma":[0.9997125,0.000058641177,0.00006965978,0.000020288086,0.00010380266,0.00003496699],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040983307,0.0003402008,0.00030402897,0.0020867407,0.00033022292,0.00042904625,0.00018691065,0.00046317765,0.00071880413],"category_scores_gemma":[0.000769267,0.00014881634,0.0001869718,0.0010126135,0.00045346332,0.00014845053,0.00037619474,0.00016357368,0.00033599258],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005735559,0.000088114815,0.58376473,0.0003120614,0.00005721319,0.00079329126,0.001820206,0.00019134079,0.37112632,0.00012286495,0.00011249138,0.041037817],"study_design_scores_gemma":[0.000007328251,0.00064177,0.9512907,0.0000322034,0.000081212056,0.0033612335,0.0011393918,0.0005749548,0.041333806,0.000119957265,0.0014039467,0.000013477276],"about_ca_topic_score_codex":0.0019739254,"about_ca_topic_score_gemma":0.0014547214,"teacher_disagreement_score":0.0020867407,"about_ca_system_score_codex":0.0001351713,"about_ca_system_score_gemma":0.00018569152,"threshold_uncertainty_score":0.0039248466},"labels":[],"label_agreement":null},{"id":"W2052689921","doi":"10.1371/journal.pone.0008319","title":"Molecular Exploration of the First-Century Tomb of the Shroud in Akeldama, Jerusalem","year":2009,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakehead University","funders":"University of North Carolina at Charlotte; University College London; Hebrew University of Jerusalem; Lakehead University","keywords":"Shroud; Osteology; Ancient DNA; Leprosy; Archaeology; Ancient history; Bioarchaeology; Paleopathology; Biology; History; Medicine; Population; Immunology","score_opus":0.02766489628139332,"score_gpt":0.24972109219087996,"score_spread":0.22205619590948664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052689921","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99749905,0.0007421203,0.00016871792,0.00005478848,0.000015713069,0.000021699425,0.00020079897,0.000004925727,0.0012920953],"genre_scores_gemma":[0.9953479,0.00060800905,0.0006091897,0.00006713313,0.000015920537,0.000011944804,0.0007279002,0.000005563449,0.0026063393],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998839,0.000017936947,0.000006810838,0.000036372112,0.00002425106,0.000030835337],"domain_scores_gemma":[0.99985826,0.000019755065,0.00004885063,0.0000075869107,0.000034181252,0.000031319134],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020017983,0.00023107314,0.00033208908,0.0019640967,0.0009330639,0.0007488164,0.00032803713,0.00044039567,0.0016550599],"category_scores_gemma":[0.00045352735,0.0002095124,0.0001613706,0.0011612041,0.00047964367,0.00021423616,0.00043674762,0.00030265006,0.00046671904],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013909859,0.00024229339,0.39843372,0.00047163575,0.00015374133,0.0183885,0.028240379,0.0005316263,0.4696983,0.0018128048,0.0015846716,0.079051375],"study_design_scores_gemma":[0.000015110089,0.00018453768,0.97490615,0.00006973175,0.000031445914,0.0033006805,0.005594035,0.00016715354,0.0036860597,0.000100176796,0.011930994,0.0000139942995],"about_ca_topic_score_codex":0.011458201,"about_ca_topic_score_gemma":0.03462666,"teacher_disagreement_score":0.011458201,"about_ca_system_score_codex":0.00057017116,"about_ca_system_score_gemma":0.00027639364,"threshold_uncertainty_score":0.022782981},"labels":[],"label_agreement":null},{"id":"W2054238080","doi":"10.1139/cjz-2013-0254","title":"Patterns of host and flea communities along an elevational gradient in Colorado","year":2014,"lang":"en","type":"article","venue":"Canadian Journal of Zoology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Flea; Species richness; Biology; Ecology; Rarefaction (ecology); Host (biology); Mammal; Range (aeronautics); Generalist and specialist species; Habitat","score_opus":0.014640468706637207,"score_gpt":0.25268362092735064,"score_spread":0.23804315222071343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054238080","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9994578,0.00006095594,0.000028666933,0.000015198056,4.899709e-7,0.0000031436387,0.00012426403,0.0000012944689,0.00030819947],"genre_scores_gemma":[0.9994924,0.00005830787,0.00007406368,0.000008941989,0.0000011182856,0.000004051836,0.00020380988,8.236721e-7,0.00015659003],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997713,0.000037489488,0.000012623926,0.00008059538,0.000035309822,0.000062771695],"domain_scores_gemma":[0.9993981,0.00006251472,0.00016909264,0.000021744596,0.00020334279,0.000145225],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017651777,0.00008094162,0.00015430024,0.0009176138,0.00082739687,0.00045079252,0.00022509012,0.00022075912,0.00080247613],"category_scores_gemma":[0.00046100916,0.00012932773,0.00008294727,0.0008302198,0.00045574686,0.00019906939,0.0004661697,0.0001696665,0.00008291532],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006152129,0.000018753042,0.99387795,0.000013457845,0.000023131292,0.00006691327,0.0010651388,0.00007274916,0.002411796,0.000033773536,0.00012925427,0.0022255173],"study_design_scores_gemma":[6.8024485e-7,0.000007353219,0.9992539,0.0000035247235,0.000002723534,0.000030872947,0.0004963984,0.000058969526,0.000034509416,0.000004812927,0.000105131156,0.0000010387482],"about_ca_topic_score_codex":0.2701424,"about_ca_topic_score_gemma":0.5956947,"teacher_disagreement_score":0.2701424,"about_ca_system_score_codex":0.0011867032,"about_ca_system_score_gemma":0.00047109197,"threshold_uncertainty_score":0.53714},"labels":[],"label_agreement":null},{"id":"W2054245404","doi":"10.4161/hv.18670","title":"Construction and screening of attenuated Δ<i>phoP/Q Salmonella typhimurium</i>vectored plague vaccine candidates","year":2012,"lang":"en","type":"article","venue":"Human Vaccines & Immunotherapeutics","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Research & Development Corporation","funders":"","keywords":"Yersinia pestis; Antigen; Immunogenicity; Biology; Microbiology; Plasmid; Virology; Salmonella; Bacterial outer membrane; Plague (disease); Antibody; Virulence; Bacteria; Gene; Escherichia coli; Immunology; Genetics; Medicine","score_opus":0.017815344868324774,"score_gpt":0.2880701128359523,"score_spread":0.27025476796762754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054245404","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9886348,0.00047213183,0.008525832,0.000056793302,0.000021378275,0.0004461711,0.0010073365,0.00008552485,0.00075016473],"genre_scores_gemma":[0.9608558,0.0012009464,0.026376877,0.00005401757,0.000011392518,0.0003984843,0.0067489943,0.0000676552,0.0042859325],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996767,0.000071802126,0.000047330075,0.000057396683,0.00009421582,0.000052495896],"domain_scores_gemma":[0.99985003,0.000033376433,0.000043799504,0.000016215727,0.00002934889,0.000027311235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036816558,0.0005633998,0.00042990068,0.0003552252,0.00011037548,0.0002879979,0.00037582032,0.00027498402,0.0007559399],"category_scores_gemma":[0.0002364564,0.00020574004,0.00027566493,0.0004332592,0.00017258505,0.00019206188,0.00024229243,0.00045669227,0.0004029649],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008654221,0.00008255828,0.0001939614,0.000044704473,0.000005383522,0.00003507245,0.0000132860505,0.00017432078,0.9982603,0.000055177916,0.000023034156,0.0010257044],"study_design_scores_gemma":[0.000043100586,0.002838866,0.0030028585,0.000009253451,0.00003986958,0.0002890237,0.00004762254,0.0017303583,0.9896544,0.000022788414,0.0023109035,0.000010939832],"about_ca_topic_score_codex":0.00074095244,"about_ca_topic_score_gemma":0.0008869882,"teacher_disagreement_score":0.0007559399,"about_ca_system_score_codex":0.00027434062,"about_ca_system_score_gemma":0.0002079739,"threshold_uncertainty_score":0.0025288463},"labels":[],"label_agreement":null},{"id":"W2056198932","doi":"10.1111/j.1600-0587.2009.05746.x","title":"Spatial variation in keystone effects: small mammal diversity associated with black‐tailed prairie dog colonies","year":2010,"lang":"en","type":"article","venue":"Ecography","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Park Service","keywords":"Cynomys ludovicianus; Keystone species; Prairie dog; Ecology; Species richness; Grassland; Habitat; Burrow; Range (aeronautics); Biology; Rodent; Mammal; Species diversity; Geography","score_opus":0.0055420414059898886,"score_gpt":0.22260627143171635,"score_spread":0.21706423002572647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056198932","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99958605,0.00008149206,0.00008541981,0.000015386104,0.0000015065898,0.0000015866768,0.00005121653,0.0000020103896,0.0001752313],"genre_scores_gemma":[0.9998381,0.000017465632,0.00005272963,0.0000033730726,0.0000021309927,0.000001510881,0.000038865,8.830702e-7,0.000044976532],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99900454,0.00033361747,0.00007179204,0.0003478773,0.00013285519,0.000109297034],"domain_scores_gemma":[0.9969099,0.0011035169,0.0010241377,0.0003480987,0.0002651286,0.0003491555],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007599486,0.00015726956,0.00026244842,0.0009555161,0.00036467437,0.00055547623,0.00048964494,0.0003514788,0.0015035672],"category_scores_gemma":[0.0030916857,0.0002116007,0.0003951743,0.000814622,0.0008369077,0.00064226205,0.0009788232,0.00026221134,0.00011836497],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029655714,0.000011461812,0.99794024,0.000006373451,0.000073723895,0.000034316432,0.00020607222,0.00007463064,0.00075161306,0.00003411386,0.00002049323,0.00081730075],"study_design_scores_gemma":[5.695186e-7,0.000010221722,0.9996309,0.000001162075,0.000008351618,0.000037708778,0.00016410013,0.00008238405,0.000025837622,0.000010201611,0.000027252776,0.0000012285036],"about_ca_topic_score_codex":0.009779244,"about_ca_topic_score_gemma":0.021912206,"teacher_disagreement_score":0.009779244,"about_ca_system_score_codex":0.00024438166,"about_ca_system_score_gemma":0.00016474593,"threshold_uncertainty_score":0.019444644},"labels":[],"label_agreement":null},{"id":"W2060068822","doi":"10.7589/0090-3558-42.3.646","title":"Plague as a Mortality Factor in Canada Lynx (Lynx canadensis) Reintroduced to Colorado","year":2006,"lang":"en","type":"article","venue":"Journal of Wildlife Diseases","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Biology; Plague (disease); Zoology; Ecology; Demography; Archaeology; Geography","score_opus":0.00864726224101071,"score_gpt":0.2657243091523004,"score_spread":0.2570770469112897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060068822","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9997881,0.000045861143,0.000011173321,0.000011926993,0.0000017065372,0.000003425425,0.0000304789,0.0000012319786,0.00010620725],"genre_scores_gemma":[0.99937844,0.00007460972,0.000038562066,0.000019218425,0.0000017516933,0.0000060012803,0.00022226732,0.0000011871542,0.00025796078],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99979955,0.000027941176,0.000009441581,0.000044657198,0.00003311471,0.00008526801],"domain_scores_gemma":[0.9996772,0.000021896416,0.000091307054,0.00002083306,0.00008012034,0.00010872512],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002860517,0.00029756498,0.00021631128,0.0004632079,0.001060849,0.00047828906,0.00031704357,0.0003946651,0.0004581373],"category_scores_gemma":[0.00048292245,0.00018167048,0.00017551547,0.00024769604,0.0005076346,0.00018863784,0.0003569718,0.0003906893,0.0000736284],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006678817,0.00025232093,0.9729854,0.000014463265,0.000048525515,0.0011329268,0.0008582115,0.00023690816,0.02081494,0.00004827552,0.00035967116,0.0025804935],"study_design_scores_gemma":[0.00001205942,0.0005040343,0.9957482,0.000011726241,0.000037650145,0.00065848633,0.001074846,0.0003064348,0.0012260578,0.000011464153,0.00040170172,0.000007313627],"about_ca_topic_score_codex":0.2293237,"about_ca_topic_score_gemma":0.43524697,"teacher_disagreement_score":0.2293237,"about_ca_system_score_codex":0.0016231602,"about_ca_system_score_gemma":0.00093650504,"threshold_uncertainty_score":0.45597774},"labels":[],"label_agreement":null},{"id":"W2060121807","doi":"10.1080/09687860600927626","title":"Identification and characterization of autotransporter proteins of<i>Yersinia pestis</i>KIM","year":2006,"lang":"en","type":"article","venue":"Molecular Membrane Biology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Yersinia pestis; Biology; Virulence; Microbiology; Bacterial outer membrane; Gene; Pathogenicity island; Escherichia coli; Virology; Genetics","score_opus":0.004807671545364158,"score_gpt":0.23623451673180507,"score_spread":0.2314268451864409,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060121807","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966788,0.0006766403,0.0011304208,0.000056296503,0.0000073350257,0.000024804347,0.0010679339,0.000015221343,0.00034240008],"genre_scores_gemma":[0.9798685,0.0012640925,0.0074789654,0.00014295217,0.000022454908,0.000056021083,0.009418891,0.00003907155,0.0017090943],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999405,0.0000070397978,0.000007352632,0.00001689897,0.000016000586,0.0000122026595],"domain_scores_gemma":[0.9998419,0.00002494099,0.00005506096,0.000010384417,0.00003419295,0.000033491076],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000081440536,0.0004133951,0.00031858886,0.0002796073,0.00011825882,0.00029840478,0.00018735137,0.00024644472,0.00039069395],"category_scores_gemma":[0.00017173769,0.00011457413,0.0004521139,0.00028352687,0.00012920274,0.00022401147,0.00019087685,0.00026977606,0.00031271865],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008061093,0.000016345926,0.0013445917,0.000056702218,0.00000741437,0.00012827026,0.00003681954,0.000026197331,0.99730897,0.000015229789,0.000027006583,0.00095185835],"study_design_scores_gemma":[0.000040188446,0.0006122349,0.22312245,0.000041418236,0.00013509317,0.0028262301,0.000538468,0.0019079874,0.76236504,0.00009334055,0.008286927,0.000030748524],"about_ca_topic_score_codex":0.0009972426,"about_ca_topic_score_gemma":0.0008229806,"teacher_disagreement_score":0.0009972426,"about_ca_system_score_codex":0.00021485434,"about_ca_system_score_gemma":0.00015190507,"threshold_uncertainty_score":0.0019828677},"labels":[],"label_agreement":null},{"id":"W2061553335","doi":"10.1016/j.tim.2012.02.007","title":"Bacterial effector interplay: a new way to view effector function","year":2012,"lang":"en","type":"article","venue":"Trends in Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; Michael Smith Health Research BC; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Effector; Biology; Virulence; Function (biology); Secretion; Host (biology); Cell biology; Microbiology; Computational biology; Genetics; Gene","score_opus":0.013343657947144543,"score_gpt":0.307192643421776,"score_spread":0.29384898547463145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061553335","genre_codex":"methods","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15842316,0.23109661,0.48660472,0.05176545,0.0068606813,0.00016211881,0.0006888318,0.0028632185,0.06153522],"genre_scores_gemma":[0.7553781,0.107426316,0.09972845,0.011850864,0.0047656638,0.0002424306,0.00055346545,0.00034082442,0.019713836],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99932504,0.000117254276,0.00005520775,0.00014591237,0.0002457072,0.00011088123],"domain_scores_gemma":[0.999321,0.00024502736,0.00006371253,0.00012552473,0.00012529857,0.000119391974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001696072,0.0017858928,0.001959744,0.0015562567,0.0011224903,0.0059705987,0.0017271676,0.0031502277,0.004353715],"category_scores_gemma":[0.0010441467,0.00046915913,0.00092023035,0.0008002941,0.004392447,0.018494738,0.002899942,0.005672395,0.0015348895],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011105702,0.0002713733,0.0033753472,0.0020818932,0.00023957004,0.0015354204,0.0010454075,0.0035377352,0.43059558,0.413698,0.010190635,0.13231848],"study_design_scores_gemma":[0.00025600972,0.0011549661,0.003928645,0.00044918509,0.0004048084,0.0045264633,0.001979021,0.023840036,0.084586784,0.706306,0.17233162,0.00023651436],"about_ca_topic_score_codex":0.00020052177,"about_ca_topic_score_gemma":0.00026662272,"teacher_disagreement_score":0.0059705987,"about_ca_system_score_codex":0.0011288014,"about_ca_system_score_gemma":0.00064503634,"threshold_uncertainty_score":0.014564574},"labels":[],"label_agreement":null},{"id":"W2065269275","doi":"10.7589/2014-09-242","title":"PREVALENCE AND CHARACTERISTICS OF<i>ESCHERICHIA COLI</i>AND<i>SALMONELLA</i>SPP. IN THE FECES OF WILD URBAN NORWAY AND BLACK RATS (<i>RATTUS NORVEGICUS</i>AND<i>RATTUS RATTUS</i>) FROM AN INNER-CITY NEIGHBORHOOD OF VANCOUVER, CANADA","year":2015,"lang":"en","type":"article","venue":"Journal of Wildlife Diseases","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Centre for Disease Control; University of British Columbia; Government of British Columbia; University of Guelph; Public Health Agency of Canada; Ministry of Agriculture","funders":"Canadian Institutes of Health Research; British Columbia Centre for Disease Control; Public Health Agency of Canada","keywords":"Biology; Feces; Salmonella; Escherichia coli; Veterinary medicine; Zoology; Microbiology; Bacteria; Genetics","score_opus":0.010696089654884661,"score_gpt":0.24329856314870307,"score_spread":0.2326024734938184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065269275","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99935144,0.000047884092,0.000019353363,0.0000070310557,7.7454433e-7,0.000006343131,0.00028907205,0.0000013618785,0.00027665327],"genre_scores_gemma":[0.9987349,0.00016084741,0.00013884065,0.00002241215,0.0000020125378,0.000007422882,0.00059880497,0.0000013839358,0.00033338877],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99968004,0.000020767975,0.000029135543,0.00007043923,0.000122036305,0.00007763449],"domain_scores_gemma":[0.99933213,0.00003904825,0.00022531184,0.00002287475,0.00020103966,0.00017955668],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018160693,0.00023148415,0.0001973003,0.0010803059,0.0006781258,0.0005425574,0.00035364472,0.00022349329,0.0006137023],"category_scores_gemma":[0.00039384543,0.00021800144,0.00018020782,0.0009625752,0.0005524771,0.00014008819,0.00028813822,0.00017632937,0.00012863823],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007340889,0.000031073738,0.9940866,0.000015636988,0.000023343371,0.00017397197,0.00032615144,0.000029490471,0.0038306008,0.000009954786,0.000107986736,0.0012918338],"study_design_scores_gemma":[0.0000011108314,0.000029324496,0.99915326,0.0000038635185,0.0000046569958,0.00010593999,0.0004320361,0.000023736015,0.0001592123,0.0000017435743,0.00008319449,0.0000020250675],"about_ca_topic_score_codex":0.6280505,"about_ca_topic_score_gemma":0.83355325,"teacher_disagreement_score":0.3719495,"about_ca_system_score_codex":0.001983839,"about_ca_system_score_gemma":0.0014351152,"threshold_uncertainty_score":0.7482799},"labels":[],"label_agreement":null},{"id":"W2067385858","doi":"10.7589/0090-3558-47.4.888","title":"ASSESSMENT OF A RECOMBINANT F1-V FUSION PROTEIN VACCINE INTENDED TO PROTECT CANADA LYNX (LYNX CANADENSIS) FROM PLAGUE","year":2011,"lang":"en","type":"article","venue":"Journal of Wildlife Diseases","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Seroconversion; Biology; Vaccination; Titer; Plague (disease); Yersinia pestis; Antibody titer; Virology; Antibody; Veterinary medicine; Immunology; Virulence; Medicine","score_opus":0.013573856949207872,"score_gpt":0.2626683018182054,"score_spread":0.2490944448689975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067385858","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991972,0.00033658414,0.00020822075,0.000014512526,0.0000037114685,0.000035214845,0.000046237197,0.0000047633075,0.0001536167],"genre_scores_gemma":[0.99849236,0.00031650474,0.000601123,0.00002468605,0.0000044164112,0.000030507399,0.0002473355,0.0000019298654,0.000281155],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997515,0.00005297601,0.000010871147,0.00005054486,0.00007772272,0.00005641962],"domain_scores_gemma":[0.99984443,0.000031844073,0.000043342105,0.000008462741,0.00003570318,0.000036143025],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004002557,0.00030555073,0.00023893549,0.00014892295,0.00017409257,0.00022455186,0.000267467,0.00041462036,0.00028616816],"category_scores_gemma":[0.0003419999,0.00010680656,0.00016068702,0.000084835876,0.00027817255,0.00021912696,0.000107741624,0.00028072277,0.000046754674],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011308292,0.00033908882,0.010854129,0.00015399735,0.00005313324,0.00008974366,0.00017044766,0.00059982477,0.9809341,0.00005217785,0.00009333253,0.0055293157],"study_design_scores_gemma":[0.00037043766,0.09929082,0.2762532,0.000054829477,0.00028640794,0.0010087749,0.0007169731,0.005680252,0.6113779,0.00007807845,0.004852016,0.000030197612],"about_ca_topic_score_codex":0.015278695,"about_ca_topic_score_gemma":0.0203273,"teacher_disagreement_score":0.015278695,"about_ca_system_score_codex":0.0008323891,"about_ca_system_score_gemma":0.00047890263,"threshold_uncertainty_score":0.030379534},"labels":[],"label_agreement":null},{"id":"W2067890532","doi":"10.1139/w07-087","title":"<i>Yersinia</i> genome diversity disclosed by <i>Yersinia pestis</i> genome-wide DNA microarray","year":2007,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Natural Science Foundation of China; National Science Foundation","keywords":"Biology; Yersinia pseudotuberculosis; Yersinia pestis; Genetics; Genome; Yersinia; Yersinia ruckeri; Gene; Yersinia enterocolitica; genomic DNA; Genomic island; Virulence; Bacteria","score_opus":0.007396173079400876,"score_gpt":0.21517531128842654,"score_spread":0.20777913820902566,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067890532","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9894014,0.0016201298,0.0022614845,0.00016917178,0.0000107367505,0.0000144591095,0.004388589,0.00006555759,0.0020684786],"genre_scores_gemma":[0.98408335,0.0014881655,0.0046563023,0.000085707456,0.000017242815,0.00005351347,0.008245036,0.000014161116,0.0013565028],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982953,0.0000172519,0.000009752819,0.000055629036,0.000040449417,0.000047351354],"domain_scores_gemma":[0.9999424,0.0000093013105,0.000016512719,0.000005622929,0.00001216318,0.000013901642],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015775845,0.0002088339,0.00026041004,0.00058755925,0.00023166853,0.00041764032,0.00010505734,0.0001630427,0.0006567089],"category_scores_gemma":[0.00012049995,0.00010499055,0.00015513066,0.0007589379,0.00014737007,0.00015233952,0.00018515512,0.00029123758,0.00017655194],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006897758,0.000006630071,0.0031550224,0.000025356394,0.000007610589,0.000023734143,0.000025012441,0.000059739195,0.9947476,0.00005454796,0.000082011305,0.0017436347],"study_design_scores_gemma":[0.000014613591,0.00024750805,0.58346,0.00002393229,0.00008075501,0.0007895232,0.00031957534,0.0021947029,0.40057105,0.0004089798,0.0118671665,0.000022227181],"about_ca_topic_score_codex":0.0016932961,"about_ca_topic_score_gemma":0.0026678094,"teacher_disagreement_score":0.0016932961,"about_ca_system_score_codex":0.00026400643,"about_ca_system_score_gemma":0.0002087927,"threshold_uncertainty_score":0.0033668876},"labels":[],"label_agreement":null},{"id":"W2069279531","doi":"10.1016/s0378-1135(01)00356-x","title":"Development of an ELISA procedure to detect swine carriers of pathogenic Yersinia enterocolitica","year":2001,"lang":"en","type":"article","venue":"Veterinary Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Université de Sherbrooke","funders":"","keywords":"Yersinia enterocolitica; Yersiniosis; Biology; Serotype; Serology; Seroconversion; Yersinia; Microbiology; Yersinia Infections; Virology; Antibody; Bacteria; Enterobacteriaceae; Immunology; Escherichia coli","score_opus":0.019395450716060074,"score_gpt":0.29673669463317187,"score_spread":0.2773412439171118,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069279531","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44437334,0.0019381659,0.5416293,0.00056525186,0.00047842733,0.0024300416,0.0010574274,0.0015370694,0.0059909513],"genre_scores_gemma":[0.5439182,0.0020279756,0.43758726,0.0007858698,0.00017226108,0.0026187405,0.005208568,0.00015683772,0.0075242743],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987425,0.0003686647,0.000107287044,0.00024494302,0.00034368,0.00019287832],"domain_scores_gemma":[0.998058,0.0008433868,0.00016595087,0.00019336879,0.00055515725,0.00018402947],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015331374,0.0018593663,0.0009475594,0.0012054741,0.0005945476,0.0005386175,0.0014015416,0.0015182196,0.0015010822],"category_scores_gemma":[0.0018138274,0.0009578226,0.00089490373,0.0006134783,0.0004782952,0.0007489403,0.0007142179,0.0021325801,0.00155472],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000071817216,0.0002419095,0.00036072746,0.000048991904,0.000016456717,0.00003661714,0.00002101288,0.000062761595,0.99547786,0.00010878756,0.000075709206,0.003477323],"study_design_scores_gemma":[0.00007002014,0.00198255,0.00560104,0.000033926408,0.00009415082,0.0007549317,0.00004566072,0.0047803107,0.98306584,0.00022889179,0.0033127563,0.000030078489],"about_ca_topic_score_codex":0.0008105117,"about_ca_topic_score_gemma":0.0012752194,"teacher_disagreement_score":0.0018593663,"about_ca_system_score_codex":0.0004596587,"about_ca_system_score_gemma":0.00084385683,"threshold_uncertainty_score":0.008108079},"labels":[],"label_agreement":null},{"id":"W2081075664","doi":"10.1038/icb.2015.46","title":"Host Langerin (CD207) is a receptor for <i>Yersinia pestis</i> phagocytosis and promotes dissemination","year":2015,"lang":"en","type":"article","venue":"Immunology and Cell Biology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"University of Illinois at Chicago; National Institutes of Health; Austrian Science Fund; National Institute of Allergy and Infectious Diseases; Rockefeller University; University of Minnesota; National Natural Science Foundation of China; University of Illinois at Urbana-Champaign; Presbyterian Historical Society","keywords":"Langerin; Yersinia pestis; Biology; Microbiology; C-type lectin; Dendritic cell; Cell biology; Antigen; Immune system; Immunology; Virulence","score_opus":0.014175751316092684,"score_gpt":0.28759616917709857,"score_spread":0.2734204178610059,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081075664","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990021,0.004277169,0.0014282012,0.00022841892,0.000039221726,0.000022369595,0.00015832637,0.00011477347,0.0037105696],"genre_scores_gemma":[0.994997,0.0012345292,0.0010125402,0.00009123945,0.00001647288,0.00001492661,0.00031701854,0.0000098644,0.0023064294],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999198,0.000012136185,0.0000048086576,0.000013139126,0.00001567427,0.00003455636],"domain_scores_gemma":[0.9999565,0.0000039629645,0.000013805509,0.0000024608787,0.0000049855685,0.00001827017],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000058249978,0.00029314804,0.00016159125,0.00018761183,0.00021161622,0.00024389979,0.000081244754,0.00029785137,0.0017129643],"category_scores_gemma":[0.00006600555,0.00008316642,0.00019145668,0.00008370483,0.00012871002,0.00012811784,0.00021915768,0.00029734464,0.00046199036],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009629004,0.000017892191,0.00083521765,0.00003432001,0.0000041217395,0.00021531066,0.00001212014,0.000024225961,0.9966967,0.000100322126,0.00014410472,0.0018194529],"study_design_scores_gemma":[0.00005183339,0.0006178472,0.042868167,0.00003369558,0.00004417271,0.005199668,0.00014212585,0.0016553808,0.9293027,0.00015411676,0.019915044,0.000015236241],"about_ca_topic_score_codex":0.0005996258,"about_ca_topic_score_gemma":0.0005378646,"teacher_disagreement_score":0.0017129643,"about_ca_system_score_codex":0.00032664996,"about_ca_system_score_gemma":0.00016188873,"threshold_uncertainty_score":0.0057305098},"labels":[],"label_agreement":null},{"id":"W2088520609","doi":"10.1016/s1473-3099(14)70878-3","title":"Yersinia pestis and the three plague pandemics","year":2014,"lang":"en","type":"letter","venue":"The Lancet Infectious Diseases","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Yersinia pestis; Plague (disease); Pandemic; Geography; China; Ancient history; Virology; Genealogy; Ethnology; History; Biology; Coronavirus disease 2019 (COVID-19); Archaeology; Genetics; Medicine; Virulence; Gene","score_opus":0.017683921549499295,"score_gpt":0.26835095020210337,"score_spread":0.2506670286526041,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088520609","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00038938638,0.0050297054,0.00008245806,0.96284723,0.028775496,0.000014652171,0.000044185635,0.000027207654,0.0027896944],"genre_scores_gemma":[0.0048804516,0.0022610086,0.000135421,0.92600983,0.059397686,0.000047017296,0.000023532211,0.000013356792,0.007231757],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965043,0.0011181036,0.00026754188,0.00030255958,0.0011386373,0.0006688971],"domain_scores_gemma":[0.9942193,0.002731425,0.00044856343,0.0002584865,0.00069173326,0.0016504757],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0054063927,0.0011845536,0.0016693955,0.0007817746,0.0037463512,0.0036465013,0.0017542052,0.0618313,0.0054995795],"category_scores_gemma":[0.021474825,0.00094886485,0.0017496845,0.0004462105,0.0044169566,0.0044912384,0.0027022734,0.040564448,0.0041781887],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026782978,0.000111044064,0.00062475726,0.00008223428,0.00004060489,0.0011981421,0.00011734163,0.00007485703,0.00030495663,0.0039402177,0.9760769,0.01716111],"study_design_scores_gemma":[0.00043917462,0.00015722259,0.002127402,0.0003595334,0.00008164445,0.00079792796,0.00036788106,0.0003790042,0.00029727962,0.015600168,0.9793123,0.000080423146],"about_ca_topic_score_codex":0.0084685385,"about_ca_topic_score_gemma":0.017524632,"teacher_disagreement_score":0.0618313,"about_ca_system_score_codex":0.0056720832,"about_ca_system_score_gemma":0.0055063255,"threshold_uncertainty_score":0.041154027},"labels":[],"label_agreement":null},{"id":"W2090443474","doi":"10.1073/pnas.1105107108","title":"Targeted enrichment of ancient pathogens yielding the pPCP1 plasmid of <i>Yersinia pestis</i> from victims of the Black Death","year":2011,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":260,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Social Sciences and Humanities Research Council of Canada; Michael G. DeGroote Institute for Infectious Disease Research, McMaster University; McMaster University; Eberhard Karls Universität Tübingen; University at Albany; Canadian Institutes of Health Research; Max-Planck-Institut für Evolutionäre Anthropologie; Eunice Kennedy Shriver National Institute of Child Health and Human Development; Canada Research Chairs","keywords":"Yersinia pestis; Plasmid; Plague (disease); Virology; Biology; Microbiology; Genetics; Medicine; Gene; Virulence","score_opus":0.04543567829951986,"score_gpt":0.28708225263302917,"score_spread":0.2416465743335093,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090443474","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971414,0.00021550516,0.0016389595,0.000034195757,0.000004287586,0.000030490744,0.0004527306,0.000014070818,0.00046821058],"genre_scores_gemma":[0.99056107,0.00052678195,0.004665837,0.00006197967,0.0000093155495,0.000026912126,0.0026523906,0.000017127302,0.0014785369],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988806,0.000012379573,0.0000060863513,0.000036485802,0.000023658904,0.00003338331],"domain_scores_gemma":[0.9998969,0.000026329411,0.000030658684,0.000008906263,0.000019400062,0.000017825076],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000117437914,0.0002559703,0.0001911568,0.0003603007,0.0002481584,0.00028552936,0.00015614471,0.0002705096,0.0006946076],"category_scores_gemma":[0.00025444588,0.00013178286,0.00015198765,0.00031526646,0.00023245376,0.0001294748,0.00035013954,0.0002329219,0.0002426133],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009894731,0.000026624171,0.010087088,0.000043597953,0.0000127970725,0.00011745645,0.00010546798,0.000073069954,0.98663515,0.000040708863,0.00003956313,0.0027195413],"study_design_scores_gemma":[0.00002969412,0.001258489,0.38925642,0.0000364379,0.00011727498,0.0026961402,0.0008891596,0.0020295202,0.5980198,0.00016161952,0.005486565,0.000018872193],"about_ca_topic_score_codex":0.0014171638,"about_ca_topic_score_gemma":0.0018651418,"teacher_disagreement_score":0.0014171638,"about_ca_system_score_codex":0.00012277582,"about_ca_system_score_gemma":0.00012931688,"threshold_uncertainty_score":0.0028178096},"labels":[],"label_agreement":null},{"id":"W2091561373","doi":"10.1111/j.1574-695x.2007.00280.x","title":"A comparison of immunogenicity and protective immunity against experimental plague by intranasal and/or combined with oral immunization of mice with attenuated<i>Salmonella</i>serovar Typhimurium expressing secreted<i>Yersinia pestis</i>F1 and V antigen","year":2007,"lang":"en","type":"article","venue":"FEMS Immunology & Medical Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Defence Medical Centre","funders":"","keywords":"Immunogenicity; Yersinia pestis; Biology; Immunization; Salmonella; Microbiology; Antigen; Antibody; Nasal administration; Virology; Immunoglobulin G; Immunity; Immunology; Immune system; Bacteria; Virulence","score_opus":0.009941960337603814,"score_gpt":0.2824462888403529,"score_spread":0.2725043285027491,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091561373","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978719,0.0008230377,0.0005170232,0.000049181763,0.000035194007,0.0000409979,0.00010138953,0.000037292506,0.0005240519],"genre_scores_gemma":[0.9960782,0.00096163,0.0010162592,0.00010641954,0.00005184575,0.00008669291,0.0004328594,0.00001560256,0.0012504227],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99967194,0.000048304097,0.000018359853,0.000076041724,0.00006723382,0.00011810969],"domain_scores_gemma":[0.99968493,0.00006483704,0.00008780622,0.000037802096,0.00003432198,0.0000902526],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004226527,0.00097326963,0.0007303127,0.00033101186,0.00014479982,0.0003244077,0.00032817916,0.000694512,0.00061219046],"category_scores_gemma":[0.00029429307,0.00025448448,0.0005409652,0.00012380083,0.0005056421,0.0005168905,0.00017183907,0.0013004935,0.00020782919],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026127042,0.0008690856,0.0006999911,0.00013261505,0.000031561107,0.000058313268,0.00004424059,0.00016140366,0.99226683,0.000059536764,0.0000382481,0.003025472],"study_design_scores_gemma":[0.0003910321,0.06479918,0.014945976,0.000041110412,0.00018512772,0.0004741512,0.00007841403,0.0010422332,0.9168248,0.00008590785,0.0011137524,0.000018285064],"about_ca_topic_score_codex":0.00042209946,"about_ca_topic_score_gemma":0.0006705786,"teacher_disagreement_score":0.00097326963,"about_ca_system_score_codex":0.00032200583,"about_ca_system_score_gemma":0.00033133957,"threshold_uncertainty_score":0.0023362637},"labels":[],"label_agreement":null},{"id":"W2094139653","doi":"10.1128/jcm.39.4.1672-1673.2001","title":"<i>Turicella Otitidis</i> as an Unusual Agent Causing a Posterior Auricular Abscess","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Montreal Children's Hospital; Montreal General Hospital","funders":"McGill University Health Centre; McGill University","keywords":"Abscess; Microbiology; Medicine; Biology; Surgery","score_opus":0.03735045324907655,"score_gpt":0.3947324018694651,"score_spread":0.3573819486203886,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094139653","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9742662,0.0046223407,0.0012760006,0.0055996417,0.0005769844,0.00016594348,0.0003807373,0.00023919137,0.012873037],"genre_scores_gemma":[0.9943188,0.0014011905,0.0007065155,0.0013362919,0.0009281327,0.000021185291,0.00016469511,0.000034670644,0.0010886403],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9996637,0.000038433725,0.00004854541,0.00007137061,0.000045323024,0.00013274545],"domain_scores_gemma":[0.99896085,0.00036449445,0.00024421205,0.00007145694,0.00008923577,0.0002697021],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023967659,0.001595306,0.0008408333,0.0013490005,0.0018464915,0.0012353266,0.0009792732,0.0047363196,0.0024297452],"category_scores_gemma":[0.0019223035,0.00069731066,0.00076690206,0.0009869834,0.0016368118,0.0013339117,0.00074293604,0.0024604355,0.0010097225],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000622588,0.000018253655,0.0058902176,0.000041768773,0.0000053286117,0.99169016,0.00012148157,0.000032686406,0.0012326908,0.00008438594,0.0004203872,0.00040040258],"study_design_scores_gemma":[0.000024044033,0.00012710161,0.01625774,0.00003837655,0.000035607172,0.9794958,0.00034636966,0.00025965227,0.0016383884,0.00011572304,0.001642037,0.000019073654],"about_ca_topic_score_codex":0.0038244724,"about_ca_topic_score_gemma":0.0034820824,"teacher_disagreement_score":0.0047363196,"about_ca_system_score_codex":0.0009390246,"about_ca_system_score_gemma":0.00044170284,"threshold_uncertainty_score":0.008128345},"labels":[],"label_agreement":null},{"id":"W2094740420","doi":"10.1016/j.jtbi.2011.10.039","title":"Estimating the transmission potential of supercritical processes based on the final size distribution of minor outbreaks","year":2011,"lang":"en","type":"article","venue":"Journal of Theoretical Biology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":65,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"Precursory Research for Embryonic Science and Technology; National Institute of General Medical Sciences; National Institutes of Health; University of Hong Kong","keywords":"Statistics; Outbreak; Negative binomial distribution; Branching process; Epidemic model; Basic reproduction number; Mathematics; Extinction probability; Reproduction; Biology; Demography; Poisson distribution; Ecology; Population","score_opus":0.018405509307383952,"score_gpt":0.28340426573461536,"score_spread":0.2649987564272314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094740420","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8969387,0.0001468912,0.10124068,0.00013607049,0.000009049215,0.00002480359,0.00004573326,0.00009477417,0.0013632404],"genre_scores_gemma":[0.9967443,0.000040671614,0.0029854325,0.0000048910283,0.000007919761,0.0000102344275,0.000032188043,0.000009411292,0.00016494437],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9998504,0.00005295741,0.000007132225,0.000030313618,0.000028273647,0.00003096449],"domain_scores_gemma":[0.9874445,0.010990696,0.0006065469,0.00031003842,0.00038574456,0.00026235692],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00148807,0.000344288,0.00040376707,0.0017055789,0.0004933416,0.0008361282,0.00074517494,0.00076483807,0.00074926077],"category_scores_gemma":[0.01245252,0.00040609317,0.0005126154,0.0004164758,0.00067580387,0.0014596442,0.00070593716,0.0007099163,0.000087515684],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038011133,0.00010878545,0.03483792,0.00012513643,0.00012064809,0.00026433112,0.0002887002,0.88646644,0.025943657,0.03306574,0.0004108978,0.017987715],"study_design_scores_gemma":[0.000005730626,0.000014403275,0.0026576652,0.0000037422137,0.000007010457,0.000024746423,0.000019786816,0.99266773,0.0012888475,0.0032634912,0.00003750433,0.000009351418],"about_ca_topic_score_codex":0.0018838089,"about_ca_topic_score_gemma":0.0011823373,"teacher_disagreement_score":0.0018838089,"about_ca_system_score_codex":0.0006708346,"about_ca_system_score_gemma":0.0003405777,"threshold_uncertainty_score":0.00786978},"labels":[],"label_agreement":null},{"id":"W2097961353","doi":"10.1128/jcm.02252-06","title":"Development of Multiple-Locus Variable-Number Tandem-Repeat Analysis for <i>Yersinia enterocolitica</i> subsp. <i>palearctica</i> and Its Application to Bioserogroup 4/O3 Subtyping","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics","keywords":"Multiple Loci VNTR Analysis; Yersinia enterocolitica; Subtyping; Variable number tandem repeat; Biology; Genotyping; Genotype; Yersinia Infections; Tandem repeat; Minisatellite; Genetics; Locus (genetics); Ribotyping; Microbiology; Microsatellite; Escherichia coli; Enterobacteriaceae; Genome; Bacteria; Allele","score_opus":0.030533388218681196,"score_gpt":0.37058501742389904,"score_spread":0.34005162920521786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097961353","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9272212,0.0015631113,0.06898087,0.00012030698,0.000029281195,0.000092206596,0.0006247772,0.00016827986,0.001199979],"genre_scores_gemma":[0.87874585,0.0005846983,0.11940034,0.000044342294,0.000010178158,0.00006871643,0.00065798784,0.000028382103,0.0004594727],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99950767,0.00018051494,0.000037682887,0.0001506482,0.000079992096,0.00004352555],"domain_scores_gemma":[0.99924326,0.00033062862,0.00015564411,0.00006482497,0.00013460423,0.000071060094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010306779,0.00033786974,0.00023582511,0.0008777317,0.00015853083,0.00038227535,0.00024225409,0.0003551898,0.00053139945],"category_scores_gemma":[0.0013423152,0.00019966878,0.00028074044,0.00041913014,0.00025122176,0.00026748332,0.00025536845,0.00031957388,0.00020578597],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047672537,0.00013285171,0.066392355,0.00013271533,0.0000971468,0.00016755873,0.000094173534,0.0010069428,0.86450166,0.00024403053,0.000099410936,0.06665437],"study_design_scores_gemma":[0.00007441805,0.0012303801,0.2539094,0.000056650457,0.00018657703,0.0022644617,0.00017933974,0.015132715,0.72224146,0.0004087078,0.004267764,0.00004808389],"about_ca_topic_score_codex":0.00077336025,"about_ca_topic_score_gemma":0.0013107731,"teacher_disagreement_score":0.0010306779,"about_ca_system_score_codex":0.00015480985,"about_ca_system_score_gemma":0.0002912037,"threshold_uncertainty_score":0.0054508448},"labels":[],"label_agreement":null},{"id":"W2099775561","doi":"10.1371/journal.pone.0113564","title":"Apotropaic Practices and the Undead: A Biogeochemical Assessment of Deviant Burials in Post-Medieval Poland","year":2014,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakehead University; University of Manitoba","funders":"University of North Carolina at Chapel Hill; University of South Alabama; University of Manitoba","keywords":"Population; Archaeology; Geography; History; Demography; Ancient history; Sociology","score_opus":0.03040572291176753,"score_gpt":0.30745844448221654,"score_spread":0.277052721570449,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099775561","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996803,0.000112201706,0.000021225653,0.000005931605,2.9412857e-7,0.0000020243938,0.000025640336,3.551632e-7,0.0001521749],"genre_scores_gemma":[0.99947685,0.00022889444,0.00009889663,0.0000057153557,8.771621e-7,0.0000026350738,0.000046115896,8.4711377e-7,0.000139276],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99985445,0.000021766122,0.000015186857,0.00003752369,0.0000337562,0.000037424514],"domain_scores_gemma":[0.9998229,0.000013826854,0.0001010831,0.000009703352,0.000026551446,0.000025979705],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024884954,0.0001756206,0.00020228849,0.0018087297,0.00050495117,0.0007042056,0.0003206921,0.00019275886,0.0004906742],"category_scores_gemma":[0.00037372703,0.000244501,0.00013015972,0.0012469918,0.00091994624,0.00031620258,0.0011814648,0.00023993495,0.000080578895],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012596388,0.000028075829,0.97716844,0.000042728992,0.0000461329,0.00035733782,0.008475042,0.00004839119,0.005174085,0.00019957514,0.0000352669,0.008298954],"study_design_scores_gemma":[7.0320107e-7,0.000020230551,0.9973605,0.0000059195845,0.0000046827186,0.00012178323,0.0021000304,0.00002950284,0.000104013445,0.000018196186,0.00023302784,0.00000135722],"about_ca_topic_score_codex":0.014895402,"about_ca_topic_score_gemma":0.039320566,"teacher_disagreement_score":0.014895402,"about_ca_system_score_codex":0.0004696292,"about_ca_system_score_gemma":0.00027145416,"threshold_uncertainty_score":0.029617429},"labels":[],"label_agreement":null},{"id":"W2103746321","doi":"10.1162/jinh.2007.38.2.177","title":"Households and Plague in Early Modern Italy","year":2007,"lang":"en","type":"article","venue":"The Journal of Interdisciplinary History","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":100,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Plague (disease); Quarter (Canadian coin); Demography; Geography; Incubation period; Cluster (spacecraft); Ancient history; History; Socioeconomics; Incubation; Biology; Archaeology; Sociology","score_opus":0.015199622058530076,"score_gpt":0.28214330021374234,"score_spread":0.26694367815521225,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2103746321","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9154353,0.035881806,0.00025398144,0.007492425,0.00008325709,0.0000073684528,0.00016536977,0.00001865235,0.040661823],"genre_scores_gemma":[0.9880661,0.007438665,0.00007448773,0.00021879449,0.00018512743,0.000004060805,0.0000505168,0.0000037805735,0.0039584935],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99985754,0.00006433978,0.0000051287025,0.000016977281,0.000011527867,0.000044394557],"domain_scores_gemma":[0.9998461,0.0000317769,0.00007084717,0.000008991613,0.000014897596,0.000027367652],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026346606,0.000106591375,0.00012622157,0.0010811446,0.00082978053,0.0010050285,0.00019050411,0.00040433212,0.0031535248],"category_scores_gemma":[0.00054329593,0.0001525068,0.000095686075,0.0010370432,0.0019066809,0.0006963829,0.0006743042,0.0004242639,0.00024207236],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00074763264,0.00021692709,0.47184077,0.00048990943,0.00010123224,0.0038408588,0.15200686,0.0010991421,0.0026505033,0.16365865,0.02039598,0.18295161],"study_design_scores_gemma":[0.000015713154,0.000083369334,0.8714415,0.00015751903,0.000022154767,0.0010917431,0.008075568,0.00017911945,0.00011068377,0.0062234276,0.11258304,0.000016265294],"about_ca_topic_score_codex":0.01942213,"about_ca_topic_score_gemma":0.042135064,"teacher_disagreement_score":0.01942213,"about_ca_system_score_codex":0.0022552246,"about_ca_system_score_gemma":0.00029371117,"threshold_uncertainty_score":0.038618207},"labels":[],"label_agreement":null},{"id":"W2106510314","doi":"10.7332/4450","title":"Reintroduced prairie dog colonies change arthropod communities and enhance burrowing owl foraging resources","year":2012,"lang":"en","type":"article","venue":"Immediate Science Ecology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Foraging; Grassland; Cynomys ludovicianus; Ecology; Prairie dog; Predation; Biology; Arthropod; Abundance (ecology)","score_opus":0.02306594630863393,"score_gpt":0.31994211887928364,"score_spread":0.2968761725706497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106510314","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9998504,0.00003648818,0.000026423826,0.0000071485,5.529648e-7,0.0000013394538,0.000010511634,0.000001919261,0.00006516271],"genre_scores_gemma":[0.999516,0.000071675786,0.00017650875,0.00001884905,0.0000011844575,0.0000027140832,0.00004876615,8.708649e-7,0.00016334606],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99989474,0.00002910403,0.000004794374,0.000029192926,0.000011417579,0.000030790798],"domain_scores_gemma":[0.9998499,0.000013237237,0.000078822704,0.00001298435,0.000015489306,0.000029591487],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017987272,0.00018590323,0.0001105127,0.00026453706,0.00018074317,0.00036094827,0.00011762194,0.00018803823,0.00053583644],"category_scores_gemma":[0.00022671866,0.000118827855,0.00012555283,0.00008200898,0.00021114924,0.0002490679,0.00022892821,0.00020942892,0.00006551316],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033136536,0.00056330016,0.7869628,0.000045974888,0.000109419525,0.00025364856,0.0006533598,0.00014502037,0.19906987,0.0001164144,0.00021348288,0.011535352],"study_design_scores_gemma":[0.0000034152663,0.000119827804,0.9982339,0.0000026491746,0.000008235144,0.00006808402,0.00019629291,0.00009671062,0.0011057594,0.000013306318,0.00015048994,0.0000011955989],"about_ca_topic_score_codex":0.0021848152,"about_ca_topic_score_gemma":0.011074787,"teacher_disagreement_score":0.0021848152,"about_ca_system_score_codex":0.00021828411,"about_ca_system_score_gemma":0.00010048339,"threshold_uncertainty_score":0.0043441653},"labels":[],"label_agreement":null},{"id":"W2106562542","doi":"10.1086/508221","title":"Food Safety Revisited","year":2006,"lang":"en","type":"letter","venue":"The Journal of Infectious Diseases","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Food safety; Medicine; Environmental health; Biology; Pathology","score_opus":0.007499023274692872,"score_gpt":0.2498006143673004,"score_spread":0.24230159109260752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106562542","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00023194661,0.054211177,0.0003841424,0.56083953,0.36521626,0.000018610675,0.00015463417,0.000079288744,0.018864337],"genre_scores_gemma":[0.0033422592,0.04272353,0.00050783344,0.61100346,0.30901957,0.00004476932,0.0002402038,0.0001560277,0.032962307],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.992034,0.0011960786,0.0007304088,0.0011578356,0.003914146,0.000967509],"domain_scores_gemma":[0.98128074,0.008935658,0.0014294148,0.00097394834,0.0046804748,0.0026996697],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.008772758,0.0018927229,0.0018029853,0.0035025282,0.00443128,0.015468584,0.0038833548,0.024637409,0.039168045],"category_scores_gemma":[0.018327905,0.0007822903,0.0014795384,0.0036237338,0.0071683214,0.014328852,0.006950691,0.024911478,0.013368959],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024674786,0.00003197497,0.00012376907,0.00040263086,0.000015784664,0.0001634754,0.00019694353,0.000026923775,0.000119104545,0.009937597,0.9423906,0.04656656],"study_design_scores_gemma":[0.000005853785,0.000009476103,0.00010892474,0.00023575922,0.0000050632757,0.00007765532,0.00010295766,0.0000095625455,0.00003048518,0.0027923838,0.9966162,0.0000057310003],"about_ca_topic_score_codex":0.0026988534,"about_ca_topic_score_gemma":0.0042297575,"teacher_disagreement_score":0.039168045,"about_ca_system_score_codex":0.0053132307,"about_ca_system_score_gemma":0.008467734,"threshold_uncertainty_score":0.13103014},"labels":[],"label_agreement":null},{"id":"W2106578715","doi":"10.1038/srep04245","title":"Ancient pathogen DNA in archaeological samples detected with a Microbial Detection Array","year":2014,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Government of Canada; Genome Canada; Ontario Genomics; Natural Sciences and Engineering Research Council of Canada; McMaster University; Ontario Genomics Institute","keywords":"Ancient DNA; Metagenomics; Vibrio cholerae; Biology; DNA sequencing; Yersinia pestis; DNA microarray; Computational biology; Shotgun sequencing; Evolutionary biology; DNA; Genetics; Gene; Bacteria; Medicine","score_opus":0.011091182675780928,"score_gpt":0.23910107498359,"score_spread":0.22800989230780908,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106578715","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9849052,0.00066823035,0.011178123,0.00013282194,0.00001638824,0.000020673495,0.0011811204,0.00016168847,0.0017356379],"genre_scores_gemma":[0.9631184,0.00048966624,0.03156186,0.00022836968,0.000019300354,0.0000621127,0.0014641294,0.000017922282,0.0030382343],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997415,0.00004033376,0.00001539083,0.00010266295,0.00006472556,0.00003535766],"domain_scores_gemma":[0.9998815,0.000035185065,0.00002999049,0.000011401869,0.000024632805,0.000017215569],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021428213,0.0001755821,0.00014979526,0.0006973798,0.00029235482,0.00042503246,0.00013939675,0.00036385463,0.0008634552],"category_scores_gemma":[0.0003689906,0.00018158354,0.0001157435,0.00048667993,0.0002449408,0.00015863667,0.0003501045,0.00023075497,0.00044687692],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001154376,0.000023692459,0.028587427,0.000047504793,0.000017085504,0.00008669374,0.00018892436,0.00014174916,0.95942855,0.000114508344,0.00014472476,0.011103718],"study_design_scores_gemma":[0.0000147780265,0.00048382627,0.29655173,0.000037321486,0.00010284058,0.001439803,0.00066126767,0.005266101,0.68326795,0.00031835312,0.011820399,0.000035543435],"about_ca_topic_score_codex":0.00074864767,"about_ca_topic_score_gemma":0.0022207366,"teacher_disagreement_score":0.0008634552,"about_ca_system_score_codex":0.00015519428,"about_ca_system_score_gemma":0.0001590077,"threshold_uncertainty_score":0.0028885603},"labels":[],"label_agreement":null},{"id":"W2106599603","doi":"10.1242/jeb.083162","title":"HOW PERNICIOUS PARASITES TURN VICTIMS INTO ZOMBIES","year":2012,"lang":"en","type":"article","venue":"Journal of Experimental Biology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Zombie; Biology; Cognitive science; Host (biology); Ecology; Environmental ethics; Zoology; Neuroscience; Psychology; Computer science; Philosophy; World Wide Web","score_opus":0.015507405637728854,"score_gpt":0.32321138571821506,"score_spread":0.3077039800804862,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106599603","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0729066,0.0959621,0.0055218125,0.5658239,0.025794411,0.0001923567,0.0009417877,0.0009279819,0.23192911],"genre_scores_gemma":[0.37958303,0.08083038,0.00672706,0.19729228,0.004260477,0.00018120551,0.0007631438,0.0009531159,0.32940933],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99872005,0.00036694438,0.000042833894,0.00021191186,0.00031171937,0.00034658067],"domain_scores_gemma":[0.9988838,0.00018788713,0.00013581176,0.00006518917,0.0002268505,0.0005004702],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013524255,0.0005279799,0.0004376021,0.0007907682,0.0026192577,0.0054310192,0.00070056587,0.0030160532,0.026550146],"category_scores_gemma":[0.0040652426,0.0005153003,0.0004538839,0.00033296784,0.0038989,0.005801096,0.0029588987,0.0039378246,0.007784992],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030309454,0.00015768848,0.0117968805,0.0011954661,0.00009866585,0.0016844079,0.026467051,0.00017212259,0.018395737,0.08036194,0.67620325,0.18316372],"study_design_scores_gemma":[0.000018833243,0.00007961947,0.005362013,0.0005477463,0.000033654254,0.001140274,0.013328409,0.00006852836,0.0020380933,0.012984453,0.96436113,0.00003728083],"about_ca_topic_score_codex":0.008976206,"about_ca_topic_score_gemma":0.013410906,"teacher_disagreement_score":0.026550146,"about_ca_system_score_codex":0.0016664427,"about_ca_system_score_gemma":0.0018339928,"threshold_uncertainty_score":0.08881909},"labels":[],"label_agreement":null},{"id":"W2108008086","doi":"10.1645/ge-2580.1","title":"Description of the Larva of Ceratophyllus vagabundus vagabundus (Siphonaptera: Ceratophyllidae) from Nests of Ross's and Lesser Snow Geese in Nunavut, Canada","year":2011,"lang":"en","type":"article","venue":"Journal of Parasitology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba; University of Saskatchewan","funders":"","keywords":"Snow; Biology; Larva; Zoology; Ecology; Geography; Meteorology","score_opus":0.019310737165144868,"score_gpt":0.24982077440377148,"score_spread":0.23051003723862662,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108008086","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99276286,0.00068789715,0.00018119882,0.000026603466,0.000015747113,0.00006841918,0.001505204,0.000013760797,0.00473821],"genre_scores_gemma":[0.9944277,0.00061889907,0.00070997025,0.00006096276,0.0000055082382,0.00003215077,0.0018052019,0.0000071169006,0.0023326175],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99991846,0.0000028707689,0.0000076182187,0.000019438856,0.000027009677,0.000024555282],"domain_scores_gemma":[0.9998381,0.000013907948,0.000026475638,0.000007642681,0.00005841432,0.00005548868],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006179734,0.00027067962,0.00016304628,0.0008410388,0.00084319373,0.00031060044,0.0002488984,0.00017878436,0.0010214287],"category_scores_gemma":[0.00017815032,0.00015260979,0.0001489042,0.00038037286,0.00030955867,0.00013045123,0.00024110726,0.00018730994,0.0003059469],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027144208,0.00008630234,0.7867172,0.00018545534,0.00005145225,0.0026685952,0.0020415278,0.00017071688,0.168469,0.00011794285,0.0009384653,0.0382819],"study_design_scores_gemma":[0.0000019273061,0.00007265075,0.99554896,0.000011139908,0.0000062530294,0.0006368924,0.00038604118,0.000039209557,0.001798612,0.0000042015336,0.0014909738,0.0000031799611],"about_ca_topic_score_codex":0.27217624,"about_ca_topic_score_gemma":0.6238734,"teacher_disagreement_score":0.72782373,"about_ca_system_score_codex":0.0010942635,"about_ca_system_score_gemma":0.0011416145,"threshold_uncertainty_score":0.54118395},"labels":[],"label_agreement":null},{"id":"W2108125433","doi":"10.1371/journal.pone.0049803","title":"Yersinia pestis: New Evidence for an Old Infection","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Social Sciences and Humanities Research Council of Canada","keywords":"Yersinia pestis; Genome; Biology; Evolutionary biology; Plague (disease); Phylogenetic tree; Ancient DNA; Phylogenetics; Genomics; Genetics; Genealogy; Geography; History; Gene; Demography; Virulence; Archaeology","score_opus":0.18346547723064882,"score_gpt":0.3600452256113286,"score_spread":0.1765797483806798,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108125433","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.84921724,0.11642888,0.006827514,0.010606208,0.0007606611,0.000022756405,0.0017202945,0.00013987022,0.014276536],"genre_scores_gemma":[0.9492135,0.039111033,0.0045280503,0.0017901256,0.0008150266,0.000011479146,0.0018031087,0.000032166623,0.0026954794],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99959165,0.000060175407,0.000037496477,0.00015467749,0.000077366734,0.000078655416],"domain_scores_gemma":[0.9988513,0.00034850862,0.00026212822,0.00019584251,0.00017650395,0.0001658479],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010561147,0.00047197135,0.0005887468,0.0012624749,0.0007875241,0.0019212434,0.000405677,0.0011224428,0.0028351424],"category_scores_gemma":[0.0016090056,0.00025632101,0.00027247294,0.0012715384,0.0019520732,0.002816707,0.0010170286,0.0015736604,0.00068924855],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003982803,0.00024328502,0.4228483,0.003156348,0.0005696107,0.00802867,0.0064008827,0.0007335356,0.22055206,0.026139796,0.0077745463,0.29957008],"study_design_scores_gemma":[0.000067934365,0.00042547775,0.7763642,0.0010850116,0.00023187367,0.009835679,0.005397269,0.00079946924,0.012880858,0.015527553,0.17724243,0.00014231991],"about_ca_topic_score_codex":0.0011021743,"about_ca_topic_score_gemma":0.0013872485,"teacher_disagreement_score":0.0028351424,"about_ca_system_score_codex":0.00053357997,"about_ca_system_score_gemma":0.00042756746,"threshold_uncertainty_score":0.0094845295},"labels":[],"label_agreement":null},{"id":"W2108843629","doi":"10.1017/s0959774314000754","title":"Governing from the Grave: Vampire Burials and Social Order in Post-medieval Poland","year":2014,"lang":"en","type":"article","venue":"Cambridge Archaeological Journal","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Vampire; Folklore; Agency (philosophy); Order (exchange); History; Grave goods; Social order; Social life; Ancient history; Archaeology; Ethnology; Art; Sociology; Literature; Politics; Social science; Political science; Law","score_opus":0.01245907005666223,"score_gpt":0.2660677203755519,"score_spread":0.25360865031888963,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108843629","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99646384,0.00079777703,0.000082658284,0.0002708163,0.000004552557,0.000004162692,0.000014274969,0.0000017333545,0.0023603463],"genre_scores_gemma":[0.9986098,0.00035916775,0.00006471625,0.00003047211,0.0000021479377,0.0000031531838,0.000009343823,0.0000014231799,0.00091969647],"study_design_codex":"qualitative","study_design_gemma":"observational","domain_scores_codex":[0.99962485,0.000092894275,0.000016596534,0.00006797716,0.000046077133,0.00015157164],"domain_scores_gemma":[0.9998204,0.000030750012,0.000078075616,0.0000115720595,0.00001425156,0.000044975004],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005121073,0.00017773853,0.0002761458,0.0010817039,0.002873136,0.002184542,0.00043232352,0.0005183388,0.0013666359],"category_scores_gemma":[0.0007083636,0.00026890475,0.000080556536,0.0008736728,0.0056280177,0.0013828265,0.0039611883,0.000983523,0.00013274972],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031394567,0.00013889454,0.10756576,0.00019440881,0.00005208426,0.0017628542,0.8121467,0.0001214611,0.0043061757,0.02299305,0.0010520342,0.049352616],"study_design_scores_gemma":[0.000008966483,0.00010140507,0.5836164,0.00012337035,0.000015807782,0.0005608556,0.3874402,0.00009475575,0.00054851954,0.0027755646,0.02469186,0.000022404827],"about_ca_topic_score_codex":0.018216012,"about_ca_topic_score_gemma":0.06584314,"teacher_disagreement_score":0.018216012,"about_ca_system_score_codex":0.0022075924,"about_ca_system_score_gemma":0.00087488187,"threshold_uncertainty_score":0.036219954},"labels":[],"label_agreement":null},{"id":"W2109616396","doi":"10.1155/2012/781652","title":"Rapid Detection and Identification of<i>Yersinia pestis</i>from Food Using Immunomagnetic Separation and Pyrosequencing","year":2012,"lang":"en","type":"article","venue":"Journal of Pathogens","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada; National Research Council Canada; Canadian Food Inspection Agency","funders":"National Institutes of Health","keywords":"Yersinia pestis; Immunomagnetic separation; Pyrosequencing; Plague (disease); Contaminated food; Contamination; Food microbiology; Identification (biology); Biology; Food science; Computational biology; Medicine; Microbiology; Bacteria; Gene; Genetics; Virulence","score_opus":0.021396985024238934,"score_gpt":0.28771903113251585,"score_spread":0.2663220461082769,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109616396","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8070177,0.0025264942,0.18327749,0.00043665207,0.00011753731,0.00023126104,0.00199305,0.0007112785,0.0036885676],"genre_scores_gemma":[0.769237,0.0025034605,0.22131063,0.00035278048,0.00006184488,0.0002506455,0.002971942,0.00013655356,0.0031751771],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991775,0.00017006112,0.000061131395,0.00016077433,0.000349712,0.000080842416],"domain_scores_gemma":[0.99958044,0.00017014235,0.00009349609,0.000042223295,0.000089182526,0.000024575556],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007661618,0.00047752418,0.00046407696,0.0005918835,0.00023304384,0.00063634344,0.0003089239,0.0005526029,0.00034526276],"category_scores_gemma":[0.0010343366,0.00024202855,0.00031231286,0.00033298213,0.00037024345,0.00025539717,0.00045608738,0.00054428796,0.00049307244],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020929294,0.000016147536,0.00061544724,0.000027493545,0.0000043606274,0.000027024531,0.000019966206,0.0001125961,0.99603015,0.00005726421,0.000051399107,0.0030172036],"study_design_scores_gemma":[0.0000048481866,0.00018717111,0.009884271,0.000012638648,0.000014688224,0.00027426318,0.00004734481,0.0035979275,0.9833557,0.00013954774,0.0024662178,0.000015526926],"about_ca_topic_score_codex":0.0006067736,"about_ca_topic_score_gemma":0.0010528498,"teacher_disagreement_score":0.0007661618,"about_ca_system_score_codex":0.00018656878,"about_ca_system_score_gemma":0.00028010653,"threshold_uncertainty_score":0.004051864},"labels":[],"label_agreement":null},{"id":"W2109675807","doi":"10.1353/bhm.2004.0119","title":"Averting Disaster: The Hudson's Bay Company and Smallpox in Western Canada during the Late Eighteenth and Early Nineteenth Centuries","year":2004,"lang":"en","type":"article","venue":"Bulletin of the history of medicine","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Smallpox; Bay; Quarantine; De facto; Agency (philosophy); Public health; History; Threatened species; Ethnology; Political science; Vaccination; Geography; Ancient history; Archaeology; Law; Medicine; Sociology; Virology","score_opus":0.007192914748821957,"score_gpt":0.19916212865914895,"score_spread":0.191969213910327,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109675807","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7443651,0.028057018,0.0005529121,0.07520854,0.0011980496,0.00006984636,0.00040342947,0.00003963704,0.15010563],"genre_scores_gemma":[0.9096586,0.012043135,0.0002857124,0.0047708442,0.0001435317,0.000014240379,0.000101687045,0.000030598912,0.07295164],"study_design_codex":"qualitative","study_design_gemma":"qualitative","domain_scores_codex":[0.99930775,0.00006244056,0.000010590862,0.000047795773,0.00016139491,0.00040994317],"domain_scores_gemma":[0.9992895,0.0000663826,0.00005022476,0.000010355307,0.00021759956,0.00036579947],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00053756195,0.0002567309,0.00023735607,0.00088338327,0.022235291,0.0038992707,0.0006309066,0.0012864738,0.0036493004],"category_scores_gemma":[0.0014607635,0.00025950934,0.00012973693,0.0013873291,0.00738454,0.00089800823,0.002061204,0.0026615404,0.0001875485],"study_design_candidate":"qualitative","study_design_consensus":"qualitative","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039006514,0.00014236693,0.11509579,0.0003603524,0.00006608175,0.0098600425,0.49745455,0.0007665321,0.0021455118,0.12168039,0.1238502,0.12818822],"study_design_scores_gemma":[0.000018926155,0.000028704053,0.09468982,0.00031968637,0.000024436105,0.0007152667,0.13455416,0.00014573436,0.00044166032,0.0020264545,0.766976,0.000059216],"about_ca_topic_score_codex":0.9941414,"about_ca_topic_score_gemma":0.99821043,"teacher_disagreement_score":0.9777647,"about_ca_system_score_codex":0.07642587,"about_ca_system_score_gemma":0.09471707,"threshold_uncertainty_score":0.5545111},"labels":[],"label_agreement":null},{"id":"W2110476474","doi":"10.1128/iai.00071-13","title":"Na <sup>+</sup> /H <sup>+</sup> Antiport Is Essential for Yersinia pestis Virulence","year":2013,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Yersinia pestis; Antiporter; Virulence; Biology; Antiporters; Enterobacteriaceae; Microbiology; Complementation; Mutant; Yersinia pseudotuberculosis; In vivo; Biochemistry; Gene; Escherichia coli; Membrane; Genetics","score_opus":0.01291910561066272,"score_gpt":0.28172057750685237,"score_spread":0.26880147189618964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2110476474","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98901516,0.0039266176,0.0039062933,0.00033238187,0.00005012734,0.000018212908,0.0006406174,0.00014922988,0.0019614093],"genre_scores_gemma":[0.99563307,0.0008225197,0.0014400565,0.000059766433,0.000016010526,0.0000131179795,0.00071637076,0.000027854048,0.0012711957],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984074,0.000034534787,0.000021563266,0.00002474557,0.000045596138,0.000032741933],"domain_scores_gemma":[0.99977595,0.000040090865,0.000081520055,0.000025654677,0.00003341508,0.000043379],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018367106,0.0004282956,0.00038305874,0.00011471176,0.00017517607,0.0004670851,0.0002103146,0.00033257416,0.0013204393],"category_scores_gemma":[0.00021606621,0.0001442827,0.00022424568,0.00011800356,0.00035908972,0.000397133,0.00031073313,0.00035471914,0.00069837243],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002035977,0.0000125706465,0.0005666024,0.000046803,0.0000035670198,0.00015204691,0.00001167764,0.00004206018,0.99788254,0.00008888716,0.000047523725,0.0009420499],"study_design_scores_gemma":[0.000026913442,0.00029947603,0.03163316,0.000011909056,0.000020177527,0.001234665,0.00016403502,0.0018938571,0.95932615,0.00027064641,0.0051065194,0.000012583906],"about_ca_topic_score_codex":0.0005530801,"about_ca_topic_score_gemma":0.0004990301,"teacher_disagreement_score":0.0013204393,"about_ca_system_score_codex":0.00022024634,"about_ca_system_score_gemma":0.0003099526,"threshold_uncertainty_score":0.00441736},"labels":[],"label_agreement":null},{"id":"W2111696076","doi":"10.1128/jb.01067-08","title":"Divergence among Genes Encoding the Elongation Factor Tu of <i>Yersinia</i> Species","year":2008,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; Defence Research and Development Canada; Université Laval; Centre hospitalier universitaire de Québec","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Genome Canada","keywords":"Biology; Yersinia; Yersinia pseudotuberculosis; Genetics; Phylogenetic tree; Gene; Enterobacteriaceae; Phylogenetics; Escherichia coli; Bacteria; Virulence","score_opus":0.02725802371850863,"score_gpt":0.26607142802313344,"score_spread":0.2388134043046248,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111696076","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983919,0.0005861676,0.00045579072,0.000011988272,0.0000025427394,0.000003733278,0.00024215903,0.000009678705,0.00029606684],"genre_scores_gemma":[0.9972224,0.00023714911,0.0009694387,0.00002112657,0.0000035856458,0.000009054134,0.0012693725,0.0000074298714,0.0002604052],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99982196,0.000023939081,0.000023456365,0.00006116838,0.000024568206,0.000044920034],"domain_scores_gemma":[0.99966466,0.00008246638,0.00011021265,0.000026278276,0.00006441688,0.000051839063],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021425985,0.00023422447,0.00029407543,0.0007015948,0.00026222656,0.00036571585,0.00014127414,0.000323315,0.0005168363],"category_scores_gemma":[0.0006393349,0.00011745393,0.00027335837,0.0005853561,0.00022484153,0.000278602,0.00025327684,0.00022626734,0.00018645692],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005921629,0.00003501503,0.074722484,0.000098224096,0.00006571658,0.00019865422,0.00044312837,0.00019747631,0.9117913,0.00015642816,0.00005478816,0.011644594],"study_design_scores_gemma":[0.000017124745,0.0004054217,0.9053437,0.00003969497,0.000084920764,0.0017388357,0.00051387335,0.0010294055,0.08720106,0.00021988658,0.0033856602,0.000020425272],"about_ca_topic_score_codex":0.0010036525,"about_ca_topic_score_gemma":0.0007448785,"teacher_disagreement_score":0.0010036525,"about_ca_system_score_codex":0.00030660068,"about_ca_system_score_gemma":0.00017208634,"threshold_uncertainty_score":0.0022246242},"labels":[],"label_agreement":null},{"id":"W2111863530","doi":"10.2193/2008-503","title":"Habitat Selection by Prairie Dogs in a Disturbed Landscape at the Edge of Their Geographic Range","year":2010,"lang":"en","type":"article","venue":"Journal of Wildlife Management","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Universidad Nacional Autónoma de México; Northwestern University","keywords":"Cynomys ludovicianus; Habitat; Prairie dog; Ecology; Shrub; Forb; Range (aeronautics); Occupancy; Shrubland; Geography; Vegetation (pathology); Home range; Grassland; Biology","score_opus":0.005820999503940922,"score_gpt":0.24495852602966706,"score_spread":0.23913752652572615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111863530","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99988794,0.00000828357,0.00003784877,0.0000033541444,3.6481825e-7,5.365684e-7,0.000013778074,9.385724e-7,0.000046944442],"genre_scores_gemma":[0.99989843,0.0000051093407,0.000039120892,0.000001925076,7.8531946e-7,5.061919e-7,0.000029830828,4.6607065e-7,0.00002378473],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996989,0.00012842263,0.000014241174,0.0000784442,0.000030816547,0.00004926058],"domain_scores_gemma":[0.99920195,0.0002589506,0.00033072784,0.00006788221,0.000040516,0.00009993904],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035401963,0.00013149015,0.00020503622,0.00038638467,0.00022743618,0.0004972547,0.00023289681,0.00016349978,0.00089692906],"category_scores_gemma":[0.00093315064,0.0001356211,0.00020174551,0.00029770375,0.0004428677,0.00020834942,0.00029366778,0.00023735494,0.00007944874],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049564453,0.00002544,0.998594,0.0000018765893,0.00002240386,0.00003941713,0.00007529052,0.00013494541,0.0005602293,0.000014495524,0.000015499887,0.00046688667],"study_design_scores_gemma":[0.0000025749418,0.00003468661,0.99891984,0.0000011876624,0.000007060796,0.00008629591,0.0001688102,0.0006821369,0.000051402763,0.000013593904,0.000030976917,0.0000013186807],"about_ca_topic_score_codex":0.0069298414,"about_ca_topic_score_gemma":0.014744606,"teacher_disagreement_score":0.0069298414,"about_ca_system_score_codex":0.00021108845,"about_ca_system_score_gemma":0.00009423086,"threshold_uncertainty_score":0.013779044},"labels":[],"label_agreement":null},{"id":"W2113229776","doi":"10.1093/bioinformatics/btt527","title":"FPSAC: fast phylogenetic scaffolding of ancient contigs","year":2013,"lang":"en","type":"article","venue":"Bioinformatics","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pacific Institute for the Mathematical Sciences; Simon Fraser University","funders":"","keywords":"Contig; Genome; Phylogenetic tree; Biology; Ancient DNA; Extant taxon; DNA sequencing; Clade; Whole genome sequencing; Evolutionary biology; Computational biology; Genetics; DNA; Gene","score_opus":0.011547503245307398,"score_gpt":0.25099856947682125,"score_spread":0.23945106623151385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2113229776","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06262506,0.0007124714,0.77289796,0.0003287647,0.0003344837,0.0003817604,0.028368806,0.12928657,0.005064106],"genre_scores_gemma":[0.123811275,0.0003049718,0.79125905,0.00014248732,0.00012938566,0.0006423256,0.06976482,0.010463456,0.0034822237],"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9986896,0.00022666932,0.000059644535,0.00043066737,0.00047328975,0.00012014403],"domain_scores_gemma":[0.99491334,0.0022478316,0.000360109,0.0011897869,0.0009641916,0.00032466356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002290381,0.0024191365,0.0015688549,0.003995167,0.0023896089,0.002359352,0.0026613013,0.0013136012,0.018462092],"category_scores_gemma":[0.0103131225,0.0014160507,0.0017257713,0.004784229,0.0009364987,0.0018913292,0.0026606002,0.0023577553,0.008787656],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0038422544,0.0004732573,0.013205909,0.0027015596,0.00075105496,0.0012488912,0.0022845836,0.044071443,0.09233962,0.019755477,0.17819583,0.6411302],"study_design_scores_gemma":[0.00146284,0.0006623451,0.019300565,0.00035787447,0.00029356117,0.001617082,0.00067677815,0.6726624,0.104662,0.051804386,0.1460915,0.00040866336],"about_ca_topic_score_codex":0.006996242,"about_ca_topic_score_gemma":0.007865409,"teacher_disagreement_score":0.018462092,"about_ca_system_score_codex":0.0008223692,"about_ca_system_score_gemma":0.002324968,"threshold_uncertainty_score":0.061761856},"labels":[],"label_agreement":null},{"id":"W2117146922","doi":"10.1099/mic.0.026690-0","title":"An iron-regulated LysR-type element mediates antimicrobial peptide resistance and virulence in Yersinia pseudotuberculosis","year":2009,"lang":"en","type":"article","venue":"Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Advanced Foods and Materials Network","keywords":"Yersinia pseudotuberculosis; Microbiology; Virulence; Biology; Antibiotic resistance; Plasmid; Antimicrobial; Gene; Genetics; Antibiotics","score_opus":0.00623927587298566,"score_gpt":0.2613370484873265,"score_spread":0.2550977726143408,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117146922","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99840987,0.00039546547,0.0007739014,0.000049510676,0.0000032520143,0.000006218774,0.000065467866,0.000029738194,0.00026666233],"genre_scores_gemma":[0.99793243,0.00018779788,0.00089505996,0.000028496914,0.0000042484357,0.000012962058,0.00023256385,0.000016584368,0.0006896945],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989486,0.000028092136,0.000009706383,0.00001824006,0.00002549538,0.000023648641],"domain_scores_gemma":[0.99978167,0.00006152594,0.00007610696,0.000021296808,0.000016969778,0.00004240388],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019851536,0.00038742478,0.0002478562,0.00017983482,0.00013835062,0.00022997218,0.00014073392,0.0003092221,0.00074748497],"category_scores_gemma":[0.0002400894,0.00019404545,0.00020092254,0.00011406744,0.00028883546,0.00015900815,0.00022647496,0.00036612048,0.0004975792],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058663423,0.000011837455,0.00021807915,0.000010839313,9.4315095e-7,0.000096364434,0.000010566694,0.000020276166,0.9993043,0.000020079158,0.0000069244693,0.0002412273],"study_design_scores_gemma":[0.00006569088,0.0004993866,0.03892619,0.000019015311,0.000017144532,0.0020202976,0.0001291157,0.0013882734,0.9559591,0.00012756034,0.00083520805,0.0000131689585],"about_ca_topic_score_codex":0.00027897093,"about_ca_topic_score_gemma":0.00032733424,"teacher_disagreement_score":0.00074748497,"about_ca_system_score_codex":0.00021298847,"about_ca_system_score_gemma":0.00013271895,"threshold_uncertainty_score":0.002500534},"labels":[],"label_agreement":null},{"id":"W2117351110","doi":"10.1128/jb.00406-12","title":"Expanded Roles for Multicargo and Class 1B Effector Chaperones in Type III Secretion","year":2012,"lang":"en","type":"review","venue":"Journal of Bacteriology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research; Fondation pour la Recherche Médicale; Research Nova Scotia; Nova Scotia Health Research Foundation; Dalhousie Medical Research Foundation","keywords":"Effector; Biology; Secretion; Type three secretion system; Chaperone (clinical); Cell biology; Cytoplasm; Plasma protein binding; Virulence; Genetics; Biochemistry; Gene","score_opus":0.038801489758575856,"score_gpt":0.3520978466241708,"score_spread":0.313296356865595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117351110","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.015357859,0.9754597,0.003114037,0.00079370994,0.00086350524,0.00001744781,0.00010096935,0.00008485549,0.004208017],"genre_scores_gemma":[0.05020447,0.9382576,0.0034606429,0.0007727554,0.0010302211,0.000027297114,0.00045134258,0.000033180702,0.0057625067],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99974304,0.000031750846,0.00002850044,0.00007042473,0.00008530922,0.000040959694],"domain_scores_gemma":[0.9997936,0.0000448507,0.000043045464,0.000010830441,0.000070705755,0.000037078997],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005586681,0.0006307245,0.00068671705,0.0007469994,0.0003322544,0.001068608,0.0004488238,0.00071457395,0.0019523212],"category_scores_gemma":[0.00033101722,0.00024474986,0.0007260747,0.00081479165,0.00040049877,0.0014184531,0.0007227259,0.0009211698,0.000942356],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048768008,0.00009074141,0.0024392903,0.018877465,0.00027940777,0.001499868,0.0011490469,0.0016129467,0.3425962,0.016807247,0.020414783,0.59374535],"study_design_scores_gemma":[0.000021698599,0.0005084526,0.010762402,0.0014820031,0.0003481982,0.003989583,0.00039355535,0.00097211136,0.064237356,0.007994964,0.90919524,0.00009448012],"about_ca_topic_score_codex":0.000446292,"about_ca_topic_score_gemma":0.00061048876,"teacher_disagreement_score":0.0019523212,"about_ca_system_score_codex":0.00075174466,"about_ca_system_score_gemma":0.0007926713,"threshold_uncertainty_score":0.006531179},"labels":[],"label_agreement":null},{"id":"W2120061713","doi":"10.1139/cjm-2015-0391","title":"Evaluation of the pathogenic potential, antimicrobial susceptibility, and genomic relations of <i>Yersinia enterocolitica</i> strains from food and human origin","year":2015,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Universidad Nacional de San Luis","keywords":"Yersinia enterocolitica; Virulence; Biology; Pulsed-field gel electrophoresis; Microbiology; Genotype; Serotype; Yersinia; Antimicrobial; Pathogen; Yersinia Infections; Genetics; Enterobacteriaceae; Gene; Bacteria; Escherichia coli","score_opus":0.030096002901369046,"score_gpt":0.2774184506757997,"score_spread":0.24732244777443063,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120061713","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99874336,0.00034985555,0.00018980706,0.000023653734,0.0000022290315,0.000010341438,0.0003900215,0.0000029097125,0.00028789422],"genre_scores_gemma":[0.997329,0.00037756356,0.0007620726,0.000023591445,0.000008507998,0.00001036828,0.0012845047,0.0000030336346,0.00020132498],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999724,0.000054585304,0.000023061766,0.00008866578,0.00005891107,0.00005076079],"domain_scores_gemma":[0.9995254,0.000070298964,0.00022634902,0.000020056461,0.000101419995,0.000056424564],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022921084,0.00041334095,0.0002756531,0.00048875547,0.0001880343,0.00035045666,0.00012690271,0.00024877052,0.00050255196],"category_scores_gemma":[0.0004916628,0.00013915704,0.00013209562,0.00043078806,0.00022008157,0.00019829572,0.00020317109,0.00017989999,0.00018101446],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000716385,0.00015400138,0.7638964,0.000172147,0.000052832565,0.00033681467,0.00046901003,0.00012405528,0.21991345,0.000036778616,0.00017252337,0.013955508],"study_design_scores_gemma":[0.000009597938,0.00047498517,0.98743814,0.000016625363,0.000035347533,0.001232174,0.0005471002,0.00019724111,0.009102458,0.000018738127,0.0009222662,0.0000053154376],"about_ca_topic_score_codex":0.0033569997,"about_ca_topic_score_gemma":0.0023951626,"teacher_disagreement_score":0.0033569997,"about_ca_system_score_codex":0.0001684093,"about_ca_system_score_gemma":0.00022127944,"threshold_uncertainty_score":0.0066748857},"labels":[],"label_agreement":null},{"id":"W2121050513","doi":"10.1017/s0261127912000022","title":"MUSIC, PESTILENCE AND TWO SETTINGS OF <i>O BEATE SEBASTIANE</i>","year":2012,"lang":"en","type":"article","venue":"Early Music History","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Plague (disease); The Renaissance; SAINT; Art; Patron saint; Reading (process); Art history; Humanities; Visual arts; History; Ancient history; Law; Political science","score_opus":0.018150254539198264,"score_gpt":0.2383836546018708,"score_spread":0.22023340006267253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121050513","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38960865,0.13272041,0.0016789153,0.09167823,0.0045763734,0.000043945125,0.00003793556,0.00005724511,0.37959823],"genre_scores_gemma":[0.9273891,0.02808741,0.00042951523,0.005133467,0.0013806904,0.000027781047,0.000013929717,0.000019138117,0.037518974],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994097,0.0003304031,0.000013291266,0.00005198375,0.000090382775,0.000104218096],"domain_scores_gemma":[0.9994392,0.0003350226,0.00007280906,0.000030838466,0.000048554833,0.00007356887],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00096935517,0.0003923392,0.00035301698,0.00082778564,0.0059874095,0.0046470086,0.0004191216,0.002027308,0.0026608622],"category_scores_gemma":[0.0012440812,0.00017030754,0.00015438751,0.0007234494,0.02108244,0.0023463715,0.003113303,0.0027774626,0.0002939807],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028637,0.000130929,0.0024471255,0.00039996125,0.000018233151,0.003354209,0.36007336,0.00008236518,0.0046056733,0.57351375,0.016099697,0.038988367],"study_design_scores_gemma":[0.00005040242,0.00027586278,0.0068884753,0.00060228264,0.000017691698,0.0018160921,0.15253863,0.000061082166,0.0017332232,0.03998853,0.7959957,0.000032031952],"about_ca_topic_score_codex":0.0048337663,"about_ca_topic_score_gemma":0.009678837,"teacher_disagreement_score":0.0059874095,"about_ca_system_score_codex":0.0026973202,"about_ca_system_score_gemma":0.001256992,"threshold_uncertainty_score":0.01957053},"labels":[],"label_agreement":null},{"id":"W2121929668","doi":"10.1111/j.1096-0031.2008.00211.x","title":"A molecular phylogeny of fleas (Insecta: Siphonaptera): origins and host associations","year":2008,"lang":"en","type":"article","venue":"Cladistics","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":277,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Rijksuniversiteit Groningen; University of Alberta; Universitetet i Tromsø; Oregon State University; University of Nevada, Reno; Universidade Federal de Minas Gerais; University of Canterbury; University of California, Davis; University of Fort Hare; Ben-Gurion University of the Negev; University of Tasmania; Helsingin Yliopisto; Pennsylvania State University; Universitat de Barcelona; Colorado State University; University of Otago; Universidad de Zaragoza; University of Glasgow; Brigham Young University; Iowa State University; National Science Foundation","keywords":"Paraphyly; Monophyly; Biology; Sister group; Zoology; Clade; Phylogenetic tree; Genetics","score_opus":0.01724468277586197,"score_gpt":0.2705299513717624,"score_spread":0.2532852685959004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121929668","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977697,0.00048490398,0.0006494038,0.00003208648,0.0000017159258,0.0000063984985,0.0003609569,0.000016776887,0.0006781782],"genre_scores_gemma":[0.99736255,0.00017836121,0.0014999007,0.000009451932,0.0000027500055,0.0000045140123,0.00070608646,0.0000047002804,0.0002317849],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99995124,0.000011515959,0.000003803,0.000017043001,0.000007835673,0.000008543484],"domain_scores_gemma":[0.9998084,0.000037025904,0.00007406886,0.000010002043,0.000028794913,0.000041756102],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014080344,0.00017486367,0.00013544405,0.00087136275,0.00027022886,0.0003317913,0.00010693426,0.00018050412,0.0014700181],"category_scores_gemma":[0.00025479766,0.00009191357,0.00018161003,0.00050377595,0.00012297499,0.0002548137,0.00018333983,0.00024330406,0.000330341],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000419634,0.000057094658,0.43125242,0.00026549707,0.00016067094,0.0003795069,0.00074087846,0.0015944736,0.50699127,0.0007937134,0.0004872816,0.056857634],"study_design_scores_gemma":[0.0000060526822,0.00009359888,0.989521,0.000038895774,0.0000463314,0.0004404504,0.00023360332,0.0031444703,0.0031366455,0.0001584184,0.0031731564,0.0000074427257],"about_ca_topic_score_codex":0.0015796316,"about_ca_topic_score_gemma":0.0029187582,"teacher_disagreement_score":0.0015796316,"about_ca_system_score_codex":0.00021341577,"about_ca_system_score_gemma":0.00013957125,"threshold_uncertainty_score":0.004917741},"labels":[],"label_agreement":null},{"id":"W2123152317","doi":"10.1016/s1473-3099(13)70323-2","title":"Yersinia pestis and the Plague of Justinian 541–543 AD: a genomic analysis","year":2014,"lang":"en","type":"article","venue":"The Lancet Infectious Diseases","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":487,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Health and Medical Research Council; Social Sciences and Humanities Research Council of Canada; Canada Research Chairs; Ant Group; Michael G. DeGroote Institute for Infectious Disease Research, McMaster University; Northern Arizona University","keywords":"Yersinia pestis; Plague (disease); Phylogenetic tree; Pandemic; Biology; Genome; Ancient DNA; Phylogenetics; Extant taxon; Virology; Evolutionary biology; Genetics; Gene; Geography; Coronavirus disease 2019 (COVID-19); Archaeology; Virulence; Demography; Infectious disease (medical specialty); Medicine","score_opus":0.008133148150019243,"score_gpt":0.2592276068898154,"score_spread":0.25109445873979613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123152317","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9886553,0.0022938994,0.00046753773,0.00046626956,0.000017629785,0.000016479784,0.0014780903,0.000008569927,0.0065962346],"genre_scores_gemma":[0.99296194,0.0015335479,0.0007283359,0.00013557494,0.00002558336,0.00000876607,0.002213254,0.000007236448,0.0023857357],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999434,0.000007949689,0.000002416554,0.000012750174,0.000012841649,0.00002065945],"domain_scores_gemma":[0.9999169,0.000025490592,0.000018517248,0.0000047303834,0.000017343167,0.000017158482],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000848015,0.00021591812,0.000144815,0.00077159057,0.00034264082,0.00042274658,0.00015337084,0.0002864687,0.0029546928],"category_scores_gemma":[0.00021702256,0.00010653315,0.000242158,0.00081522105,0.00025334978,0.00016113381,0.0002096375,0.00040417854,0.00038423273],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003682954,0.00028872324,0.12736787,0.00030581484,0.00026292235,0.0061292658,0.001257946,0.0012825873,0.78752476,0.004340282,0.0019783918,0.06557846],"study_design_scores_gemma":[0.000048628135,0.00021349234,0.93185943,0.0000620029,0.00016199102,0.0033999556,0.00090288883,0.00080673466,0.03427558,0.0012137553,0.027038502,0.00001696477],"about_ca_topic_score_codex":0.008794167,"about_ca_topic_score_gemma":0.008162635,"teacher_disagreement_score":0.008794167,"about_ca_system_score_codex":0.0004932866,"about_ca_system_score_gemma":0.00036386246,"threshold_uncertainty_score":0.017485917},"labels":[],"label_agreement":null},{"id":"W2124183748","doi":"10.2166/wh.2009.215","title":"The detection of Yersinia enterocolitica in surface water by quantitative PCR amplification of the ail and yadA genes","year":2009,"lang":"en","type":"article","venue":"Journal of Water and Health","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada; University of Waterloo; Canadian Water Network; Public Health Agency; Public Health Agency of Canada","keywords":"Yersinia enterocolitica; Yersinia; Virulence; Biology; Gene; Microbiology; Polymerase chain reaction; Watershed; Surface water; Bacteria; Genetics; Environmental science","score_opus":0.02126820669756505,"score_gpt":0.31886209581685787,"score_spread":0.2975938891192928,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124183748","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97205997,0.00079004123,0.021750983,0.00005798536,0.00001306306,0.00018170601,0.0025561415,0.00016444537,0.002425676],"genre_scores_gemma":[0.9475226,0.0013744563,0.04004633,0.000110600515,0.000010964215,0.0004673401,0.0034609418,0.000043141776,0.00696356],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991704,0.00008547856,0.00003802998,0.00021097915,0.00038169813,0.000113415226],"domain_scores_gemma":[0.9992818,0.00015834464,0.00022264084,0.00004243894,0.00025641915,0.00003825711],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004984772,0.00068165263,0.0003621363,0.0008338582,0.00028542595,0.0006778826,0.00028954982,0.00027168772,0.0006006426],"category_scores_gemma":[0.0006907277,0.0002276753,0.00022497939,0.0010331445,0.0005880713,0.00023765974,0.00026645983,0.00033138256,0.00028103852],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007877034,0.00003277873,0.016368404,0.00009161698,0.000010632221,0.00003103043,0.00029802584,0.00007504843,0.9774563,0.0000415502,0.00004458583,0.005471349],"study_design_scores_gemma":[0.000019572564,0.0007110997,0.37924227,0.000065562104,0.00008646055,0.000252487,0.0011527855,0.0036679755,0.6100743,0.00011704463,0.0045661167,0.000044326436],"about_ca_topic_score_codex":0.02797521,"about_ca_topic_score_gemma":0.050946213,"teacher_disagreement_score":0.02797521,"about_ca_system_score_codex":0.0007407816,"about_ca_system_score_gemma":0.00067470985,"threshold_uncertainty_score":0.055624723},"labels":[],"label_agreement":null},{"id":"W2124777165","doi":"10.1046/j.1432-1327.2000.01260.x","title":"Structural identification of the lipopolysaccharide O‐antigen produced by <i>Yersinia enterocolitica</i> serotype O:28","year":2000,"lang":"en","type":"article","venue":"European Journal of Biochemistry","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Yersinia enterocolitica; Serotype; Lipopolysaccharide; Periodate; Yersinia; Rhamnose; Chemistry; Polysaccharide; Antigen; Antiserum; Microbiology; Biochemistry; Bacteria; Biology; Immunology","score_opus":0.006227702511555241,"score_gpt":0.23490007772761218,"score_spread":0.22867237521605693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124777165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985676,0.0002565787,0.00042144264,0.00004039328,0.000005526224,0.000007961573,0.000118680444,0.000005856214,0.00057606027],"genre_scores_gemma":[0.99424297,0.0005393485,0.0025278204,0.00006667879,0.000011890243,0.0000139332615,0.0012269886,0.000007601283,0.0013627525],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999645,0.0000046724367,0.0000021159917,0.000008844178,0.000007437778,0.0000124754315],"domain_scores_gemma":[0.9998517,0.000015584043,0.000051244562,0.00001423443,0.000027961882,0.000039187395],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007740572,0.00034036086,0.0001358129,0.00019749379,0.00010286839,0.00022249737,0.00012422926,0.00019176179,0.0005590988],"category_scores_gemma":[0.00021306443,0.000089134795,0.00018591475,0.00015385934,0.00025319232,0.00018400078,0.000151921,0.0002634648,0.0003032543],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011721189,0.000016599624,0.0016041063,0.00004414834,0.0000033682013,0.00023102445,0.000037986414,0.000088450186,0.9960575,0.00009951534,0.000027967999,0.0016721778],"study_design_scores_gemma":[0.00005149584,0.0011589366,0.0950524,0.000042387772,0.0000545788,0.0021476327,0.0004191574,0.0013801242,0.8924957,0.00032448748,0.0068525323,0.000020548156],"about_ca_topic_score_codex":0.00080780685,"about_ca_topic_score_gemma":0.0004644476,"teacher_disagreement_score":0.00080780685,"about_ca_system_score_codex":0.0002240623,"about_ca_system_score_gemma":0.00033385374,"threshold_uncertainty_score":0.0018703341},"labels":[],"label_agreement":null},{"id":"W2125389920","doi":"10.1002/chem.200901255","title":"Identification and Role of a 6‐Deoxy‐4‐Keto‐Hexosamine in the Lipopolysaccharide Outer Core of <i>Yersinia enterocolitica</i> Serotype O:3","year":2009,"lang":"en","type":"article","venue":"Chemistry - A European Journal","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Yersinia enterocolitica; Chemistry; Lipopolysaccharide; Bacterial outer membrane; Epitope; Residue (chemistry); Microbiology; Dehydratase; Serotype; Monoclonal antibody; Biochemistry; Stereochemistry; Enzyme; Antibody; Bacteria; Escherichia coli; Biology; Gene","score_opus":0.01167565215307381,"score_gpt":0.2599452353106487,"score_spread":0.2482695831575749,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125389920","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976178,0.0007733412,0.0010731461,0.00004029275,0.000011075784,0.00000951548,0.0001169483,0.000007663511,0.00035027222],"genre_scores_gemma":[0.99594814,0.00066358264,0.0018857507,0.000049811573,0.000014991504,0.0000113981605,0.00062945,0.0000074019727,0.00078953884],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993634,0.000012251338,0.0000065718496,0.000014864439,0.000013356279,0.000016585913],"domain_scores_gemma":[0.99988115,0.000011323583,0.000043400116,0.000008862261,0.000020770787,0.00003456577],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009006302,0.00035045296,0.00012950457,0.00018813544,0.00013576123,0.00028027,0.00012909695,0.0002539367,0.0002653656],"category_scores_gemma":[0.00016020068,0.00010597214,0.00023891339,0.00018424427,0.00032602277,0.0002214563,0.00031107725,0.00022252304,0.00017881319],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014790685,0.0000073665806,0.0013596106,0.000042983294,0.0000035954235,0.00015979752,0.000044212346,0.000031278378,0.9970822,0.00004532033,0.000009155442,0.0010665993],"study_design_scores_gemma":[0.000019559366,0.00061935134,0.09491736,0.00003355943,0.000058325306,0.0020132645,0.00042041202,0.0010860503,0.8968321,0.00019347659,0.0037857099,0.000020822366],"about_ca_topic_score_codex":0.0011625184,"about_ca_topic_score_gemma":0.00059484184,"teacher_disagreement_score":0.0011625184,"about_ca_system_score_codex":0.0002035461,"about_ca_system_score_gemma":0.00021821875,"threshold_uncertainty_score":0.0023115277},"labels":[],"label_agreement":null},{"id":"W2125996884","doi":"10.1139/w09-061","title":"Detection of <i>Yersinia pestis</i> over time in seeded bottled water samples by cultivation on heart infusion agar","year":2009,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Yersinia pestis; Seeding; Inoculation; Agar; Biology; Bottled water; Agar plate; Microbiology; Virulence; Chemistry; Chromatography; Bacteria; Biochemistry; Horticulture; Environmental engineering; Environmental science; Agronomy","score_opus":0.006057692617358408,"score_gpt":0.22561518057704283,"score_spread":0.2195574879596844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125996884","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951539,0.0003499839,0.0025302146,0.000033805904,0.000012483017,0.000050398667,0.00097425474,0.0000729309,0.0008220086],"genre_scores_gemma":[0.97938854,0.00076451845,0.012912267,0.000063149935,0.000017932642,0.00018269311,0.0031525264,0.000045565725,0.0034727813],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997625,0.00002903498,0.000022965974,0.00007523477,0.00007462501,0.000035595745],"domain_scores_gemma":[0.9995715,0.00012517719,0.00009824764,0.000037411857,0.00011769474,0.000049908045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000244913,0.0004507444,0.0003354539,0.00034913776,0.0001870037,0.0005072266,0.00038926658,0.00036015012,0.00094040966],"category_scores_gemma":[0.00047867378,0.00021430581,0.00027612472,0.00044389092,0.0002147237,0.00035337088,0.00025873928,0.00042672516,0.000348023],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017646646,0.000042671825,0.004951636,0.000043215612,0.000007317889,0.00005370172,0.00010798099,0.00004968487,0.9931202,0.000011669176,0.000022545695,0.0014128111],"study_design_scores_gemma":[0.00000898022,0.0014825407,0.07397381,0.000018120898,0.00004199536,0.00024028911,0.00024411433,0.0009670141,0.92228144,0.00002487253,0.00069846236,0.000018261735],"about_ca_topic_score_codex":0.0027940737,"about_ca_topic_score_gemma":0.0035039713,"teacher_disagreement_score":0.0027940737,"about_ca_system_score_codex":0.00024337693,"about_ca_system_score_gemma":0.00020111018,"threshold_uncertainty_score":0.0055556297},"labels":[],"label_agreement":null},{"id":"W2129849013","doi":"10.4067/s0716-10182011000500013","title":"¿Qué fue la plaga de Atenas?","year":2011,"lang":"es","type":"article","venue":"Revista chilena de infectología","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Fell; Tragedy (event); Philology; Quarter (Canadian coin); Narrative; History; Order (exchange); Population; Literature; Ancient history; Classics; Philosophy; Demography; Geography; Art; Sociology; Gender studies; Archaeology; Cartography","score_opus":0.0173601717575088,"score_gpt":0.27830049380327865,"score_spread":0.26094032204576983,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129849013","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0886295,0.18662658,0.0024325766,0.3368552,0.019412382,0.00008251666,0.00118294,0.00023431973,0.36454394],"genre_scores_gemma":[0.5010501,0.10899978,0.0013122767,0.061338276,0.007627022,0.00007342306,0.0005625316,0.00013996645,0.31889662],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994869,0.00014494678,0.000020191581,0.00012809366,0.00008601074,0.00013382635],"domain_scores_gemma":[0.9993812,0.00014548065,0.00011362636,0.000043000062,0.00018047796,0.00013613152],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010568635,0.00053416233,0.00043499548,0.00068584655,0.0029835678,0.006039411,0.0005484071,0.0029841154,0.013366727],"category_scores_gemma":[0.0034351156,0.00021644786,0.00036570698,0.00063858187,0.0051403255,0.0047834963,0.0016660112,0.0036893913,0.004095405],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00078286853,0.0001936917,0.03188992,0.0022108445,0.00010970159,0.007569139,0.08496645,0.000121876416,0.0034836174,0.323159,0.31105095,0.23446189],"study_design_scores_gemma":[0.0000125202905,0.00004460496,0.003560237,0.00041969048,0.000012455741,0.0013951239,0.018813707,0.000016164538,0.00028406727,0.005593278,0.96982723,0.000020892012],"about_ca_topic_score_codex":0.018611182,"about_ca_topic_score_gemma":0.028731592,"teacher_disagreement_score":0.018611182,"about_ca_system_score_codex":0.0025008426,"about_ca_system_score_gemma":0.0021454992,"threshold_uncertainty_score":0.04471618},"labels":[],"label_agreement":null},{"id":"W2133252799","doi":"10.1353/jmh.2004.0012","title":"Smallpox in Washington's Army: Strategic Implications of the Disease During the American Revolutionary War","year":2004,"lang":"en","type":"article","venue":"The Journal of Military History","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Smallpox; Battlefield; Independence (probability theory); Siege; Law; World War II; Spanish Civil War; Political science; Outbreak; History; Medicine; Ancient history; Vaccination; Virology","score_opus":0.014248332664275623,"score_gpt":0.24576636732740662,"score_spread":0.23151803466313098,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133252799","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9533713,0.008192596,0.00008563879,0.009123235,0.00027358037,0.000012042967,0.00008735686,0.0000034242971,0.028850881],"genre_scores_gemma":[0.98682946,0.008341871,0.000055814322,0.0005467658,0.00012899927,0.000005588359,0.00006545986,0.0000011619674,0.0040247412],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99983954,0.000058272577,0.0000054511256,0.000013277773,0.000021156417,0.000062184656],"domain_scores_gemma":[0.9998147,0.000033378947,0.000052282194,0.000004760382,0.0000396735,0.000055172786],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041281088,0.00015319823,0.00007662146,0.00066081865,0.0023115627,0.0013019887,0.00014012305,0.00070429087,0.0016343739],"category_scores_gemma":[0.0009309071,0.00008015539,0.00006387505,0.0006462738,0.0010297681,0.0007191323,0.00066897355,0.0006602882,0.00017333165],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000699322,0.00040307097,0.5693069,0.00050341245,0.00006708086,0.010412046,0.10980219,0.0007248658,0.008463452,0.025387287,0.040630437,0.23359998],"study_design_scores_gemma":[0.000014316099,0.0003587021,0.7071865,0.0005254574,0.00003714256,0.0021467558,0.13245685,0.00021864919,0.0009359351,0.0027926678,0.1532877,0.000039430426],"about_ca_topic_score_codex":0.0432003,"about_ca_topic_score_gemma":0.10769005,"teacher_disagreement_score":0.0432003,"about_ca_system_score_codex":0.0017994471,"about_ca_system_score_gemma":0.0013650234,"threshold_uncertainty_score":0.08589774},"labels":[],"label_agreement":null},{"id":"W2134426978","doi":"10.1503/cmaj.050297","title":"Plague: a continuing threat","year":2005,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Plague (disease); Outbreak; Multidisciplinary approach; Epidemiology; Coronavirus disease 2019 (COVID-19); Medicine; Environmental health; Medical emergency; Data science; Computer security; Virology; Computer science; Political science; Disease; Pathology; Law; Infectious disease (medical specialty)","score_opus":0.005198018183265661,"score_gpt":0.252998705322252,"score_spread":0.24780068713898634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134426978","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009292517,0.30684105,0.0016372573,0.653584,0.010442861,0.000033582644,0.00038346605,0.00019297483,0.01759232],"genre_scores_gemma":[0.15749717,0.544238,0.0050300374,0.19900762,0.069013216,0.00012795892,0.0011111916,0.00007503488,0.023899766],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980939,0.00047207324,0.00020181439,0.0002583846,0.00052501005,0.00044874763],"domain_scores_gemma":[0.9939474,0.0011010478,0.0007327632,0.0002526329,0.0018838973,0.002082195],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0037192923,0.0009546557,0.0013579044,0.0010163999,0.002302269,0.0062989094,0.0012553559,0.011159026,0.024072392],"category_scores_gemma":[0.0049313847,0.00036641854,0.0005221738,0.0012280663,0.0052018757,0.0069444138,0.0034118386,0.006448078,0.004902734],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036015105,0.00024322858,0.023887036,0.0038044811,0.0001374737,0.0050681154,0.002203725,0.00054399524,0.0050012944,0.030776944,0.5122376,0.4157359],"study_design_scores_gemma":[0.000025997913,0.00023764686,0.017185023,0.0029889562,0.00004311722,0.006871511,0.0047473675,0.00026515216,0.00019289437,0.01335855,0.95402735,0.000056390978],"about_ca_topic_score_codex":0.006585194,"about_ca_topic_score_gemma":0.0073815486,"teacher_disagreement_score":0.024072392,"about_ca_system_score_codex":0.0030969207,"about_ca_system_score_gemma":0.0055143107,"threshold_uncertainty_score":0.08053011},"labels":[],"label_agreement":null},{"id":"W2136672960","doi":"10.1016/j.forsciint.2012.04.020","title":"Forensic archaeoentomology—An insect fauna from a burial in York Minster","year":2012,"lang":"en","type":"article","venue":"Forensic Science International","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"York University","keywords":"Coffin; Fauna; Archaeology; Spider; Forensic entomology; Insect; Biology; Geology; Geography; Paleontology; Zoology; Ecology; Forensic science","score_opus":0.03477514592674176,"score_gpt":0.3220936309239994,"score_spread":0.28731848499725765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2136672960","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988423,0.00024458882,0.000041823867,0.0000494732,0.0000039771357,0.000010587666,0.00014663517,0.0000015731099,0.0006590058],"genre_scores_gemma":[0.9955095,0.0005963864,0.00022177435,0.000057275174,0.000009751373,0.000010257763,0.00032266715,0.000004554791,0.0032678249],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998963,0.000013478671,0.000010315629,0.000026231277,0.000019315334,0.00003434748],"domain_scores_gemma":[0.99986637,0.000011432662,0.00003424653,0.000009464669,0.00003177282,0.00004674013],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012436783,0.00028426768,0.00019330034,0.0013547996,0.0025176099,0.00058466324,0.00058021117,0.00049472984,0.0024305452],"category_scores_gemma":[0.0002487397,0.0003640205,0.0001472115,0.0013812385,0.0010571365,0.00047092472,0.0012741436,0.0003557283,0.00045240234],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019046308,0.0000772307,0.8925371,0.00013690429,0.00005179597,0.009527579,0.05764477,0.00008051688,0.016672432,0.00019017757,0.00074163784,0.022149336],"study_design_scores_gemma":[0.0000015662172,0.000065113054,0.97641206,0.000025706768,0.0000151422355,0.0019349704,0.018115038,0.000038123126,0.0004918025,0.000010627195,0.0028847228,0.0000051054117],"about_ca_topic_score_codex":0.22275724,"about_ca_topic_score_gemma":0.5251013,"teacher_disagreement_score":0.22275724,"about_ca_system_score_codex":0.0012727925,"about_ca_system_score_gemma":0.0011287228,"threshold_uncertainty_score":0.44292128},"labels":[],"label_agreement":null},{"id":"W2138527737","doi":"10.1186/s13104-015-1170-4","title":"Optimizing a PCR protocol for cpn60-based microbiome profiling of samples variously contaminated with host genomic DNA","year":2015,"lang":"en","type":"article","venue":"BMC Research Notes","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Pyrosequencing; Microbiome; Biology; Computational biology; genomic DNA; Polymerase chain reaction; Genetics; DNA; Gene","score_opus":0.18939786477766282,"score_gpt":0.41631102760645555,"score_spread":0.22691316282879273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138527737","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1344263,0.0019148766,0.8497941,0.00053520163,0.0006063449,0.0045084334,0.0014549253,0.0038590804,0.0029007364],"genre_scores_gemma":[0.074028,0.0012942449,0.9130548,0.000580128,0.000114069255,0.004331041,0.003338188,0.0009357957,0.0023237849],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99010974,0.0027137904,0.0011086803,0.002925931,0.002404676,0.0007372328],"domain_scores_gemma":[0.9944918,0.0020766982,0.0007729182,0.0006626009,0.0017738539,0.00022199347],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.007448443,0.0022162083,0.0018650069,0.0017440476,0.0008770604,0.0014391965,0.0015640849,0.001461215,0.0030026753],"category_scores_gemma":[0.012870736,0.0015571801,0.0017594275,0.001332586,0.0015121707,0.0011667719,0.0013248451,0.002401123,0.004276153],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020074726,0.00017121964,0.0017357602,0.0006112286,0.00004244463,0.00014270996,0.00033144504,0.0009631743,0.980492,0.00032247286,0.0006206877,0.014366243],"study_design_scores_gemma":[0.000045782457,0.0010153713,0.0056833983,0.00027050773,0.0001799279,0.0005062862,0.00026429308,0.010013561,0.96242654,0.0006668866,0.018806407,0.00012114352],"about_ca_topic_score_codex":0.0010183326,"about_ca_topic_score_gemma":0.0033632128,"teacher_disagreement_score":0.007448443,"about_ca_system_score_codex":0.00063657755,"about_ca_system_score_gemma":0.0021985455,"threshold_uncertainty_score":0.039391637},"labels":[],"label_agreement":null},{"id":"W2141375935","doi":"10.14430/arctic761","title":"An Overview of Early Anthrax Outbreaks in Northern Canada: Field Reports of the Health of Animals Branch, Agriculture Canada, 1962-71","year":2001,"lang":"en","type":"article","venue":"ARCTIC","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"University of Alberta Hospital; Government of Northwest Territories; Health Sciences Centre","funders":"Canadian Food Inspection Agency","keywords":"Outbreak; Geography; National park; Vaccination; Socioeconomics; Agriculture; Veterinary medicine; Environmental health; Medicine; Archaeology; Virology","score_opus":0.015032317572809798,"score_gpt":0.2848972132339825,"score_spread":0.26986489566117267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141375935","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47309035,0.2703221,0.0010796476,0.0052626105,0.0007376237,0.0008500898,0.13229167,0.0006051367,0.115760796],"genre_scores_gemma":[0.62221587,0.26718205,0.0019675472,0.0017448716,0.00045594267,0.0001630032,0.061404288,0.00011027349,0.04475614],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99824226,0.000072367024,0.00018048318,0.00012428204,0.00088589225,0.0004947808],"domain_scores_gemma":[0.9927476,0.00038869024,0.00060001685,0.000087290064,0.005059954,0.0011165151],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009623148,0.0011192567,0.0004729928,0.017138153,0.0034719591,0.0020853241,0.000951654,0.00042236352,0.0040989695],"category_scores_gemma":[0.001595454,0.00050703646,0.00036752195,0.02079874,0.00074177375,0.00045448093,0.00083621027,0.0005997801,0.0007471079],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005076552,0.00015623911,0.7194904,0.0054668277,0.0003192851,0.0028660975,0.008094027,0.0007373182,0.003302868,0.0004839838,0.0700566,0.18851866],"study_design_scores_gemma":[0.000005678913,0.000047675778,0.929397,0.00042615298,0.000053643616,0.00053602783,0.0029285238,0.00005429671,0.0004019099,0.000019699202,0.066099495,0.000029937888],"about_ca_topic_score_codex":0.9905585,"about_ca_topic_score_gemma":0.99546546,"teacher_disagreement_score":0.032306634,"about_ca_system_score_codex":0.032306634,"about_ca_system_score_gemma":0.052900523,"threshold_uncertainty_score":0.23440212},"labels":[],"label_agreement":null},{"id":"W2141980601","doi":"10.7589/2013-08-215","title":"Sylvatic Plague in a Canadian Black-Tailed Prairie Dog (<i>Cynomys ludovicianus</i>)","year":2014,"lang":"en","type":"article","venue":"Journal of Wildlife Diseases","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Canadian Science Centre for Human and Animal Health; Parks Canada; University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Cynomys ludovicianus; Prairie dog; Yersinia pestis; Biology; Plague (disease); Population; Veterinary medicine; National park; Ecology; Zoology; Demography; Geography; Archaeology; Medicine","score_opus":0.006001308448914089,"score_gpt":0.2585137774308243,"score_spread":0.2525124689819102,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141980601","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99931586,0.0000783152,0.000035247285,0.00005327752,0.0000030040499,0.000012122959,0.000058961818,0.0000021088451,0.00044118034],"genre_scores_gemma":[0.99929607,0.00013331666,0.000074042844,0.000050412913,0.0000030015105,0.0000024299882,0.0001161308,7.1756506e-7,0.00032386696],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99982774,0.00001113961,0.000005504938,0.000029466812,0.000057099103,0.000069024725],"domain_scores_gemma":[0.9998636,0.0000073168553,0.000026041314,0.0000040237624,0.00004700553,0.000052061896],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015069854,0.00026264845,0.00013767065,0.00060701655,0.0016017602,0.0004912714,0.0003288663,0.0004336003,0.0004321958],"category_scores_gemma":[0.0002741926,0.00021006208,0.00014542635,0.00036818124,0.00084604195,0.00016750845,0.00033736313,0.0004582913,0.00009068385],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016323102,0.0001641029,0.96506196,0.000021134592,0.000040702496,0.012007938,0.002253863,0.00015828498,0.01585893,0.0000723035,0.00039692817,0.0038007023],"study_design_scores_gemma":[0.0000067921787,0.00018359802,0.98959607,0.000009790983,0.00002302689,0.006003393,0.0025239652,0.00018457731,0.0008782292,0.000022347629,0.0005619166,0.000006332045],"about_ca_topic_score_codex":0.62012166,"about_ca_topic_score_gemma":0.83816797,"teacher_disagreement_score":0.37987834,"about_ca_system_score_codex":0.0036108936,"about_ca_system_score_gemma":0.0023026865,"threshold_uncertainty_score":0.764231},"labels":[],"label_agreement":null},{"id":"W2143398242","doi":"10.1128/cmr.00013-07","title":"Type III Secretion Systems and Disease","year":2007,"lang":"en","type":"review","venue":"Clinical Microbiology Reviews","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":643,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Canadian Institutes of Health Research; University of British Columbia; National Institutes of Health; Michael Smith Health Research BC; Howard Hughes Medical Institute; Foundation for the National Institutes of Health","keywords":"Effector; Secretion; Virulence; Biology; Cell biology; Cytoplasm; Type three secretion system; Immune system; Microbiology; Immunology; Genetics; Gene; Biochemistry","score_opus":0.1548247679660542,"score_gpt":0.4671387157958909,"score_spread":0.3123139478298367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143398242","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015257887,0.99717784,0.00021083874,0.00034464497,0.0003747999,0.0000052123796,0.000014793817,0.000012483653,0.0017068259],"genre_scores_gemma":[0.0009963498,0.9960057,0.00024794866,0.00029175426,0.00029533784,0.000011708909,0.000044464072,0.0000020161524,0.0021046542],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99974066,0.000044050816,0.000032966116,0.000051957242,0.00010174849,0.000028585082],"domain_scores_gemma":[0.9998123,0.00005588581,0.00003374976,0.000009117446,0.000056113957,0.000032813903],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004731547,0.0011624126,0.0015040811,0.0013837893,0.00034883732,0.0012142244,0.0009015701,0.0018177849,0.005262412],"category_scores_gemma":[0.00052346376,0.0002627649,0.0003845213,0.0017775749,0.00066393585,0.0011561448,0.0007704352,0.0014501958,0.005159322],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009228783,0.00007803751,0.00032273083,0.007785947,0.00006324095,0.0005598525,0.00008956435,0.0004038957,0.005845732,0.0066468217,0.06409912,0.91401273],"study_design_scores_gemma":[0.000021359565,0.00008475139,0.00083376234,0.00139114,0.000029803325,0.001926584,0.00005844737,0.00006500085,0.0006476831,0.0029939099,0.9919354,0.000012269778],"about_ca_topic_score_codex":0.0008878558,"about_ca_topic_score_gemma":0.0009579249,"teacher_disagreement_score":0.005262412,"about_ca_system_score_codex":0.00089356315,"about_ca_system_score_gemma":0.0012122605,"threshold_uncertainty_score":0.01760447},"labels":[],"label_agreement":null},{"id":"W2149824919","doi":"10.25336/p63p5q","title":"The Measles Epidemic of 1714-1715 in New France","year":2009,"lang":"en","type":"article","venue":"Canadian Studies in Population","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Université de Montréal; Western University","funders":"","keywords":"Quarter (Canadian coin); Measles; Demography; Measles virus; Mortality rate; Medicine; Geography; Virology; Vaccination; Sociology","score_opus":0.036977312452613896,"score_gpt":0.3584433906477238,"score_spread":0.3214660781951099,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149824919","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961134,0.00029019208,0.0004314775,0.00015211743,0.000010698007,0.000025645619,0.0008285956,0.000020902102,0.0021268155],"genre_scores_gemma":[0.99407816,0.00043404012,0.0010365926,0.00004500025,0.000016495032,0.000024671039,0.002054985,0.000006342395,0.0023037468],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99973685,0.0000732185,0.000009203907,0.00003301054,0.000067861765,0.00007992426],"domain_scores_gemma":[0.99949205,0.000085589454,0.00017636873,0.000023194456,0.00013295324,0.00008981159],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006399802,0.0002081683,0.00015719357,0.0011323139,0.0005753107,0.000674391,0.0002885737,0.00021392285,0.0009153879],"category_scores_gemma":[0.0016198994,0.00010543219,0.00030633213,0.0011349407,0.0002768961,0.0003366372,0.0005171507,0.000250073,0.0001363752],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016609991,0.000030652547,0.9780728,0.000029485773,0.000069373134,0.00027992402,0.0013645114,0.002284936,0.0008780922,0.00056442467,0.0010513141,0.015208317],"study_design_scores_gemma":[0.000007270807,0.00003174938,0.9955154,0.000007942659,0.000008604624,0.00006609651,0.00058085006,0.0009437739,0.000118571734,0.000031849606,0.0026768567,0.000011124065],"about_ca_topic_score_codex":0.8815984,"about_ca_topic_score_gemma":0.9192455,"teacher_disagreement_score":0.11840159,"about_ca_system_score_codex":0.007014492,"about_ca_system_score_gemma":0.0034297507,"threshold_uncertainty_score":0.23819768},"labels":[],"label_agreement":null},{"id":"W2153652167","doi":"10.2992/007.081.0201","title":"A Review of the Mustelid-Infesting Fleas in the Family Ceratophyllidae (Insecta: Siphonaptera)","year":2013,"lang":"en","type":"review","venue":"Annals of Carnegie Museum","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Rothschild; Synonym (taxonomy); Taxon; Subgenus; Zoology; Geography; Biology; Ecology; Taxonomy (biology); Archaeology; Genus","score_opus":0.16155156979313925,"score_gpt":0.4141770286968984,"score_spread":0.2526254589037591,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153652167","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0030673253,0.9920589,0.0004253321,0.0003048691,0.00053301966,0.000013880039,0.00016938869,0.000030298177,0.003397022],"genre_scores_gemma":[0.006663691,0.9892446,0.00096600055,0.00033029576,0.0006599332,0.000013701154,0.0003214114,0.000005675421,0.0017947734],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997708,0.000029993547,0.000075100346,0.000050240084,0.00005616651,0.000017688313],"domain_scores_gemma":[0.99932957,0.0002525704,0.0001926401,0.000022665745,0.00012863622,0.0000738845],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034733588,0.0008180053,0.00089609105,0.0067989165,0.00047462867,0.00092002033,0.0006205781,0.00045567454,0.0040028915],"category_scores_gemma":[0.0006900816,0.0003488205,0.00044575622,0.0078024846,0.00048210056,0.001823893,0.0005321722,0.00054496486,0.0017508144],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010358803,0.0000893419,0.004339034,0.018329903,0.00012107896,0.0006310724,0.00038655856,0.00041770027,0.0029066475,0.000958901,0.034865182,0.9368509],"study_design_scores_gemma":[0.0000061474357,0.0002818837,0.046210453,0.00920006,0.00023255528,0.0062096054,0.00040431612,0.00016857972,0.00029377898,0.00067500956,0.9362791,0.000038578582],"about_ca_topic_score_codex":0.002912908,"about_ca_topic_score_gemma":0.009587598,"teacher_disagreement_score":0.0067989165,"about_ca_system_score_codex":0.00046748552,"about_ca_system_score_gemma":0.00083313545,"threshold_uncertainty_score":0.013391018},"labels":[],"label_agreement":null},{"id":"W2154440089","doi":"10.3389/fmicb.2011.00113","title":"A Fresh Look at the Type III Secretion System: Two-Step Model of Effector Translocation in Pathogenic Bacteria","year":2011,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Effector; Secretion; Chromosomal translocation; Microbiology; Type three secretion system; Pathogenic bacteria; Type VI secretion system; Biology; Bacteria; Cell biology; Genetics; Virulence; Biochemistry; Gene","score_opus":0.011909432876054412,"score_gpt":0.23393213275456698,"score_spread":0.22202269987851256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154440089","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0028695662,0.20864114,0.023972984,0.6099434,0.14406769,0.000065427754,0.00040169203,0.0005741699,0.009463912],"genre_scores_gemma":[0.045476876,0.36492544,0.018246604,0.24071953,0.24498269,0.00015868696,0.000617331,0.0003220162,0.084550925],"study_design_codex":"not_applicable","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99941623,0.00013131853,0.000052887284,0.00013352012,0.00018098467,0.00008508564],"domain_scores_gemma":[0.9987903,0.0005564708,0.000045341978,0.00006720412,0.00032217303,0.00021846956],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024507234,0.0012161349,0.0017407874,0.00088445464,0.0011427635,0.0032749276,0.0033496511,0.007190475,0.010039935],"category_scores_gemma":[0.0020124163,0.000422826,0.0017908334,0.0006694021,0.0027000874,0.012148531,0.0011864111,0.016274873,0.003951755],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064229383,0.0001229179,0.0003161169,0.0033720871,0.00016547134,0.0020070258,0.00047834235,0.00291309,0.031177802,0.15335529,0.7135701,0.091879554],"study_design_scores_gemma":[0.000085942884,0.00029520493,0.0006579627,0.00043550183,0.00007480675,0.0010824032,0.0005730786,0.0033159098,0.0048569147,0.25400087,0.73448074,0.00014071874],"about_ca_topic_score_codex":0.0019540556,"about_ca_topic_score_gemma":0.0025786136,"teacher_disagreement_score":0.010039935,"about_ca_system_score_codex":0.002830042,"about_ca_system_score_gemma":0.0011477154,"threshold_uncertainty_score":0.03358692},"labels":[],"label_agreement":null},{"id":"W2154891001","doi":"10.1128/iai.73.6.3598-3608.2005","title":"Human Immune Response to a Plague Vaccine Comprising Recombinant F1 and V Antigens","year":2005,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":167,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Science Centre for Human and Animal Health","funders":"","keywords":"Immunogenicity; Biology; Antigen; Immune system; Immunity; Antibody; Immunoglobulin G; Immunology; Virology; Epitope; Titer; Antibody titer; Recombinant DNA; Vaccination","score_opus":0.014415292242023679,"score_gpt":0.30909502075353656,"score_spread":0.29467972851151286,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154891001","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99888605,0.00033901815,0.00037118702,0.000018431912,0.000007970805,0.00003229254,0.000047295754,0.000018137292,0.0002797408],"genre_scores_gemma":[0.9988286,0.00013238487,0.00029673555,0.00007615218,0.000024201634,0.000025642395,0.0002601154,0.000002934113,0.000353261],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99967563,0.00013163325,0.000012612633,0.00007822812,0.000055964727,0.000045925703],"domain_scores_gemma":[0.999754,0.0000981781,0.000039944545,0.000024943722,0.00003328798,0.000049692022],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009870657,0.0003559615,0.00048872514,0.00015705841,0.000111042566,0.00025498186,0.00009903923,0.00037327217,0.00075015274],"category_scores_gemma":[0.00076456915,0.00014144494,0.00014929617,0.00008252155,0.00025532438,0.00012399399,0.00012119515,0.00036248413,0.00018229567],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.019303534,0.0032126033,0.037844613,0.0002470109,0.00017247263,0.00046900453,0.00047399796,0.001091722,0.8845983,0.0001013547,0.0010398669,0.051445346],"study_design_scores_gemma":[0.0028361492,0.3746882,0.33256713,0.000064407264,0.00035054263,0.005640103,0.00027592145,0.0060526156,0.26777917,0.00022567362,0.009457859,0.000062209096],"about_ca_topic_score_codex":0.00037072838,"about_ca_topic_score_gemma":0.00017858844,"teacher_disagreement_score":0.0009870657,"about_ca_system_score_codex":0.00017936953,"about_ca_system_score_gemma":0.0001338562,"threshold_uncertainty_score":0.005220175},"labels":[],"label_agreement":null},{"id":"W2155478904","doi":"","title":"Effects of fire and mowing on expansion of reestablished black-tailed prairie dog colonies in Chihuahuan Desert grassland","year":2008,"lang":"en","type":"article","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Cynomys ludovicianus; Prairie dog; Grassland; Geography; Habitat; Ecology; Keystone species; Agroforestry; Biology","score_opus":0.008680580232504877,"score_gpt":0.2559169800141583,"score_spread":0.24723639978165343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155478904","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9997979,0.000031048767,0.000004078923,0.0000084083995,0.000001478114,8.8161516e-7,0.000029898629,6.14721e-7,0.00012576849],"genre_scores_gemma":[0.9995834,0.000039443465,0.000018548892,0.000023148885,0.00000333491,0.000002513503,0.00009804963,8.715884e-7,0.00023062319],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998869,0.00003492909,0.0000051892907,0.000021014323,0.000010489615,0.000041473784],"domain_scores_gemma":[0.99943036,0.00014288814,0.00012120897,0.000028667158,0.000043454085,0.0002334424],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002532561,0.0001487623,0.0001444961,0.00020695162,0.00026425396,0.0003470342,0.00020420372,0.00020716741,0.0013488284],"category_scores_gemma":[0.0005857995,0.00010254225,0.00021004165,0.00011252482,0.00026789703,0.00012391763,0.00026247595,0.0003692591,0.00013924582],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017896253,0.00050293125,0.98020154,0.000018005216,0.00015273478,0.00029512675,0.00024851217,0.00033280774,0.010119491,0.000025524349,0.00026669702,0.006047049],"study_design_scores_gemma":[0.0000034783563,0.00008389205,0.9995672,0.0000013703526,0.000008156108,0.000031051284,0.00009168117,0.000074555246,0.00009976261,0.0000037439875,0.00003418183,9.696084e-7],"about_ca_topic_score_codex":0.015592758,"about_ca_topic_score_gemma":0.05075909,"teacher_disagreement_score":0.015592758,"about_ca_system_score_codex":0.00035891263,"about_ca_system_score_gemma":0.00015423787,"threshold_uncertainty_score":0.031004012},"labels":[],"label_agreement":null},{"id":"W2160294631","doi":"10.1099/ijs.0.039701-0","title":"Bdellovibrio exovorus sp. nov., a novel predator of Caulobacter crescentus","year":2012,"lang":"en","type":"article","venue":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":86,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Western University","funders":"Medical Research Council; Natural Sciences and Engineering Research Council of Canada; Medical Research Council Canada; Queen's University","keywords":"Caulobacter crescentus; Biology; Bdellovibrio; Microbiology; Predator; Flagellum; Bacteria; Ecology; Bacterial protein; Genetics; Predation","score_opus":0.01726792065699531,"score_gpt":0.27367370881416314,"score_spread":0.25640578815716786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160294631","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99676573,0.0010433733,0.00037110364,0.0000916559,0.00003217695,0.000054371383,0.0008200765,0.000014723029,0.0008067478],"genre_scores_gemma":[0.9862526,0.0020507164,0.0041676653,0.00025454117,0.00006468038,0.00008635025,0.005082773,0.000014242201,0.002026455],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997495,0.000012034365,0.000032820506,0.000086509215,0.00006839585,0.000050828698],"domain_scores_gemma":[0.9995763,0.0000478692,0.00011707478,0.000027734523,0.00014470282,0.0000862945],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017755474,0.0008549458,0.00037785343,0.001107904,0.00081031705,0.0010474415,0.00040121473,0.0005780556,0.0003568051],"category_scores_gemma":[0.0004247018,0.00026546835,0.0003063164,0.001473548,0.00036478564,0.00077773986,0.000543778,0.00033354547,0.0005117174],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00062564865,0.00031980767,0.11513892,0.00069311925,0.00006673642,0.0034150025,0.001116676,0.00040300467,0.8473512,0.00015424442,0.00040281503,0.030312847],"study_design_scores_gemma":[0.00008727852,0.0014351155,0.89256644,0.00013338675,0.00025779963,0.015322825,0.0033188758,0.0019891579,0.068241306,0.0002152781,0.01635482,0.00007774402],"about_ca_topic_score_codex":0.0158804,"about_ca_topic_score_gemma":0.015747756,"teacher_disagreement_score":0.0158804,"about_ca_system_score_codex":0.00052687194,"about_ca_system_score_gemma":0.0008131229,"threshold_uncertainty_score":0.03157592},"labels":[],"label_agreement":null},{"id":"W2160425009","doi":"10.1099/jmm.0.005678-0","title":"The subcutaneous inoculation of pH 6 antigen mutants of Yersinia pestis does not affect virulence and immune response in mice","year":2008,"lang":"en","type":"article","venue":"Journal of Medical Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"University of Kentucky","keywords":"Virulence; Yersinia pestis; Operon; Complementation; Mutant; Biology; Microbiology; Antigen; Mutagenesis; Pilus; Strain (injury); Immune system; Gene; Genetics","score_opus":0.009666612209349595,"score_gpt":0.28175067163115447,"score_spread":0.27208405942180486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160425009","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99655837,0.00039423117,0.0009813985,0.00012506079,0.00007252266,0.00009044288,0.0005740831,0.00010197151,0.0011019327],"genre_scores_gemma":[0.99071515,0.00052087626,0.0018781767,0.00017255601,0.00005011232,0.00018827163,0.0013457664,0.000058863287,0.0050702915],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993284,0.000114625014,0.000060598326,0.00014752446,0.00014049804,0.0002084283],"domain_scores_gemma":[0.9992083,0.0001222018,0.000230309,0.00010451716,0.000044265733,0.00029040134],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045752522,0.0011897525,0.0006898939,0.0010660244,0.0002652986,0.00051791506,0.0004936219,0.0010036075,0.0015533661],"category_scores_gemma":[0.00033616734,0.00046334852,0.0005232121,0.0002658118,0.00071274175,0.00050390704,0.00034158002,0.0025160294,0.00064637733],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012204912,0.00060844567,0.00027887773,0.000032721528,0.000010266732,0.00010001096,0.000028663131,0.00007534867,0.996473,0.00014501013,0.000048320187,0.0009788232],"study_design_scores_gemma":[0.0003683,0.0103045385,0.007408125,0.000023226361,0.0000623959,0.00069203204,0.00007931505,0.0009205898,0.97830874,0.00013300554,0.0016781079,0.00002161465],"about_ca_topic_score_codex":0.00051451236,"about_ca_topic_score_gemma":0.000543218,"teacher_disagreement_score":0.0015533661,"about_ca_system_score_codex":0.0004639487,"about_ca_system_score_gemma":0.00035620527,"threshold_uncertainty_score":0.0051965117},"labels":[],"label_agreement":null},{"id":"W2166640971","doi":"10.1177/104063870001200611","title":"Polymerase Chain Reaction for Definitive Identification of <i>Yersinia Ruckeri</i>","year":2000,"lang":"en","type":"article","venue":"Journal of Veterinary Diagnostic Investigation","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Guelph","keywords":"Yersinia ruckeri; Biology; Polymerase chain reaction; Microbiology; Yersinia; Serology; Identification (biology); Serotype; 16S ribosomal RNA; Bacteria; Virology; Fish <Actinopterygii>; Gene; Genetics; Antibody; Rainbow trout; Ecology; Fishery","score_opus":0.023475723878991456,"score_gpt":0.2957000133867907,"score_spread":0.27222428950779926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166640971","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.18838875,0.01051899,0.7316115,0.0016312582,0.0032126466,0.0061082845,0.012691568,0.0037814265,0.04205562],"genre_scores_gemma":[0.24096103,0.00925476,0.6677662,0.0022940969,0.0007530046,0.00936217,0.036165617,0.0006941897,0.032748938],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99540234,0.0009654851,0.00045139485,0.0020378146,0.0006695448,0.00047351496],"domain_scores_gemma":[0.9981623,0.0006634511,0.00021808145,0.00024993435,0.00054467074,0.00016155529],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016519717,0.0021567794,0.0018868725,0.0021216078,0.000686243,0.0009879571,0.0010060071,0.0013268635,0.01205446],"category_scores_gemma":[0.0024466314,0.001166629,0.0013277769,0.0011779992,0.001194977,0.0008028582,0.000847752,0.0021978961,0.010639428],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00078287086,0.0005760157,0.004928888,0.0008013501,0.00015800165,0.00078933156,0.0004468219,0.00054123,0.93984216,0.0024692279,0.0035705087,0.04509362],"study_design_scores_gemma":[0.0009783763,0.009890664,0.028102819,0.001451445,0.0012127544,0.0060445624,0.0007171079,0.025153246,0.64182496,0.006319279,0.2780109,0.00029384703],"about_ca_topic_score_codex":0.00050271105,"about_ca_topic_score_gemma":0.0015994018,"teacher_disagreement_score":0.01205446,"about_ca_system_score_codex":0.00064532965,"about_ca_system_score_gemma":0.0009151685,"threshold_uncertainty_score":0.040326238},"labels":[],"label_agreement":null},{"id":"W2167092302","doi":"10.1128/iai.00269-10","title":"Delineation of Regions of the<i>Yersinia</i>YopM Protein Required for Interaction with the RSK1 and PRK2 Host Kinases and Their Requirement for Interleukin-10 Production and Virulence","year":2010,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; McMaster University","keywords":"Biology; Virulence; Kinase; Yersinia; Bacterial protein; Microbiology; Host (biology); Protein-Serine-Threonine Kinases; Phosphorylation; Yersinia pseudotuberculosis; Cell biology; Virology; Protein kinase A; Genetics; Bacteria; Gene","score_opus":0.02084912044800057,"score_gpt":0.2875026381355828,"score_spread":0.2666535176875822,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167092302","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99780375,0.0003603027,0.0012207171,0.000035255354,0.0000039378065,0.000011878304,0.00024472512,0.000012012203,0.00030752603],"genre_scores_gemma":[0.99667764,0.00018748234,0.0017256809,0.000028266028,0.0000046273904,0.000016816448,0.0009693684,0.000014119024,0.00037601267],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999137,0.000020746776,0.000010583105,0.000014575367,0.000020081881,0.00002038813],"domain_scores_gemma":[0.9998492,0.00003856732,0.000062604944,0.000011020276,0.000009538509,0.000029090937],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000117602875,0.00028519935,0.0002619065,0.00012735378,0.00010225129,0.00024176422,0.00020517055,0.00021899787,0.00054465386],"category_scores_gemma":[0.0001594112,0.00016156859,0.00032042258,0.00012582057,0.00023268837,0.0001582813,0.00014939657,0.00038096454,0.00034147015],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013946966,0.000013722065,0.0002752455,0.000020814787,0.0000027583776,0.00005284476,0.0000086408245,0.00008097575,0.99911755,0.000041628875,0.000009114421,0.00023727192],"study_design_scores_gemma":[0.00003470967,0.0003211692,0.035816677,0.000017027416,0.000028247492,0.00094226486,0.00007367607,0.0024727727,0.9584161,0.00006695838,0.0018007235,0.000009630864],"about_ca_topic_score_codex":0.00057880377,"about_ca_topic_score_gemma":0.0006259364,"teacher_disagreement_score":0.00057880377,"about_ca_system_score_codex":0.00029342738,"about_ca_system_score_gemma":0.00017480316,"threshold_uncertainty_score":0.0021290183},"labels":[],"label_agreement":null},{"id":"W2167952434","doi":"10.1128/iai.00005-10","title":"Fine-Tuning Synthesis of<i>Yersinia pestis</i>LcrV from Runaway-Like Replication Balanced-Lethal Plasmid in a<i>Salmonella enterica</i>Serovar Typhimurium Vaccine Induces Protection against a Lethal<i>Y. pestis</i>Challenge in Mice","year":2010,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Petroleum Technology Research Centre","keywords":"Biology; Plasmid; Yersinia pestis; Virology; Salmonella enterica; Microbiology; Salmonella; Virulence; Molecular biology; Gene; Genetics; Bacteria","score_opus":0.014081009555768685,"score_gpt":0.26228185161995515,"score_spread":0.24820084206418647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167952434","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99555874,0.0003641532,0.0029538258,0.000049270093,0.00001852392,0.00004713965,0.00029404936,0.00013066517,0.0005835263],"genre_scores_gemma":[0.9932514,0.0002826276,0.0041873185,0.00004460165,0.000008093992,0.000060933755,0.00070224743,0.00005638768,0.001406588],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999841,0.00002479594,0.000021871014,0.000040858173,0.000028530101,0.000043042084],"domain_scores_gemma":[0.999858,0.000019204062,0.00006208619,0.000014718987,0.000010427116,0.00003557773],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001344972,0.0004351373,0.00023020669,0.00018483955,0.00006477411,0.00029094645,0.0002049723,0.00025059763,0.00055433984],"category_scores_gemma":[0.000110267865,0.00016927528,0.00025084935,0.00013244803,0.00019534549,0.00014391213,0.00017377347,0.00054035167,0.000260341],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004905978,0.000022231876,0.000049696442,0.000011260776,0.0000020208859,0.0000071048266,0.0000033501408,0.000034143683,0.99940526,0.000023029299,0.000010298573,0.00038243906],"study_design_scores_gemma":[0.000020412599,0.00043193964,0.001241804,0.0000032372634,0.0000144659925,0.00006308046,0.000008114214,0.00055422547,0.99681526,0.0000116375495,0.00083284196,0.000002960154],"about_ca_topic_score_codex":0.00033435572,"about_ca_topic_score_gemma":0.000546806,"teacher_disagreement_score":0.00055433984,"about_ca_system_score_codex":0.00024688095,"about_ca_system_score_gemma":0.00017645281,"threshold_uncertainty_score":0.0018544793},"labels":[],"label_agreement":null},{"id":"W2169302320","doi":"10.1016/j.carres.2008.04.003","title":"Structural studies of the O-antigens of Yersinia pseudotuberculosis O:2a and mutants thereof with impaired 6-deoxy-d-manno-heptose biosynthesis pathway","year":2008,"lang":"en","type":"article","venue":"Carbohydrate Research","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Heptose; Yersinia pseudotuberculosis; Chemistry; Mutant; Biosynthesis; Yersinia; Stereochemistry; Antigen; Biochemistry; Gene; Bacteria; Biology; Genetics","score_opus":0.07829241623898824,"score_gpt":0.3364477679730629,"score_spread":0.25815535173407467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169302320","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99902797,0.00016637899,0.00027273886,0.0000725406,0.000009592097,0.0000052872006,0.00012553364,0.0000053268595,0.0003146365],"genre_scores_gemma":[0.9982278,0.00015564825,0.00044001837,0.000039162944,0.0000066522643,0.000007290388,0.000505127,0.000008019832,0.0006101819],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999379,0.000011888859,0.0000053309946,0.000009526447,0.000016859214,0.000018528837],"domain_scores_gemma":[0.9998099,0.000051714447,0.000061570885,0.000012113531,0.000025269026,0.000039335075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014457466,0.00046670059,0.0002070507,0.00013957724,0.0003087496,0.00027059574,0.00041627281,0.00040325336,0.00081188726],"category_scores_gemma":[0.00024803184,0.00017266275,0.00028083308,0.00025097182,0.0003368881,0.0002780649,0.00019281988,0.0008723821,0.00021360793],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00074990495,0.00016161046,0.0011732853,0.00005303636,0.000015179789,0.00048491367,0.00015232322,0.001120852,0.9946056,0.0005323439,0.000104333005,0.00084659574],"study_design_scores_gemma":[0.00018926841,0.00081153313,0.029005885,0.000020064539,0.00007591215,0.0014712916,0.0007427457,0.00731699,0.95567703,0.0004915667,0.00416738,0.000030457824],"about_ca_topic_score_codex":0.0027530969,"about_ca_topic_score_gemma":0.0018560347,"teacher_disagreement_score":0.0027530969,"about_ca_system_score_codex":0.00050078676,"about_ca_system_score_gemma":0.00023758001,"threshold_uncertainty_score":0.0054740906},"labels":[],"label_agreement":null},{"id":"W2169807807","doi":"10.1111/j.1365-2958.2008.06163.x","title":"The biosynthesis and biological role of 6‐deoxyheptose in the lipopolysaccharide O‐antigen of <i>Yersinia pseudotuberculosis</i>","year":2008,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Biology; Yersinia pseudotuberculosis; Virulence; Mutant; Microbiology; Yersinia pestis; Yersinia; Biosynthesis; Lipopolysaccharide; Phosphocholine; Lipid A; Biochemistry; Bacteria; Gene; Phospholipid; Genetics","score_opus":0.008495406438221878,"score_gpt":0.22690769554335755,"score_spread":0.21841228910513566,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169807807","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990288,0.00018629634,0.00053602434,0.00002594798,0.0000026997473,0.0000032239966,0.00007437374,0.000007859249,0.00013484333],"genre_scores_gemma":[0.997948,0.00013859732,0.0011129908,0.0000133659105,0.0000024442224,0.0000066863877,0.0003419362,0.000008616325,0.00042732997],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999304,0.000016479986,0.000007428168,0.000014385289,0.000016961154,0.000014394675],"domain_scores_gemma":[0.9998704,0.000020746114,0.00004937237,0.00001741977,0.000013983876,0.000028060284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008770207,0.00029150926,0.00013999977,0.000082747945,0.00010924773,0.00021809354,0.00010264127,0.00020584778,0.00034194544],"category_scores_gemma":[0.00011300344,0.00009897362,0.00018703866,0.00008895615,0.00017470868,0.00021784933,0.00022748172,0.00026415347,0.00017088695],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053804255,0.000007587699,0.00036306947,0.0000122207675,0.000001502719,0.00003513566,0.000010498482,0.000027355278,0.9991843,0.000024793508,0.0000033003105,0.0002762885],"study_design_scores_gemma":[0.0000054747757,0.00015736333,0.009880396,0.0000031087832,0.000008585689,0.00033229528,0.00004242528,0.0003555394,0.9887523,0.000032018143,0.0004269318,0.0000036041336],"about_ca_topic_score_codex":0.00044935316,"about_ca_topic_score_gemma":0.00036258402,"teacher_disagreement_score":0.00044935316,"about_ca_system_score_codex":0.00015521648,"about_ca_system_score_gemma":0.00013666405,"threshold_uncertainty_score":0.0011439323},"labels":[],"label_agreement":null},{"id":"W2170543480","doi":"10.3201/eid1108.041354","title":"<i>Coxiella burnetii</i> Genotyping","year":2005,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":252,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Irkutsk State University","keywords":"Coxiella burnetii; Q fever; Genotyping; Biology; Typing; Multilocus sequence typing; Rickettsiaceae; Intergenic region; Phylogenetic tree; Genetics; Molecular epidemiology; Rickettsiales; Genotype; Virology; Microbiology; Gene; Genome","score_opus":0.005687837333241672,"score_gpt":0.2642784009477214,"score_spread":0.25859056361447974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2170543480","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97516656,0.0007581632,0.008550112,0.00029937775,0.000042508196,0.00027532087,0.006728071,0.00020051807,0.007979444],"genre_scores_gemma":[0.96962,0.00046861265,0.01876321,0.00038333412,0.00003106761,0.00020855451,0.0066441796,0.00005240193,0.0038287612],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993697,0.00012958753,0.00008924761,0.00013901493,0.00015461704,0.000117838645],"domain_scores_gemma":[0.9991872,0.00017322438,0.00025912092,0.00006325021,0.00023535048,0.000081866776],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046436593,0.0002629724,0.00031647162,0.0008436261,0.00027274113,0.00038756867,0.0001862533,0.00030476466,0.0021395192],"category_scores_gemma":[0.0012124781,0.000098973156,0.000191202,0.0007386749,0.00019642411,0.00011768926,0.00017692657,0.00024715063,0.0006663507],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010568367,0.00017431786,0.3686785,0.00032354778,0.000055328062,0.001338597,0.0005440381,0.00061576255,0.5764276,0.00032928635,0.0037662515,0.04668998],"study_design_scores_gemma":[0.000032683467,0.00076812046,0.6981017,0.00012741055,0.00008676629,0.005381375,0.00048384245,0.0020577654,0.27161312,0.00021928886,0.0210888,0.00003902439],"about_ca_topic_score_codex":0.004320842,"about_ca_topic_score_gemma":0.004297141,"teacher_disagreement_score":0.004320842,"about_ca_system_score_codex":0.00022826977,"about_ca_system_score_gemma":0.00017921806,"threshold_uncertainty_score":0.008591354},"labels":[],"label_agreement":null},{"id":"W2171116117","doi":"10.3376/1081-1710(2008)33[178:gvirri]2.0.co;2","title":"Geographic variation in rodent-flea relationships in the presence of black-tailed prairie dog colonies","year":2008,"lang":"en","type":"article","venue":"Journal of Vector Ecology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"U.S. Geological Survey; National Institutes of Health; National Science Foundation","keywords":"Flea; Rodent; Peromyscus; Biology; Zoology; Species richness; Deer mouse; Ecology","score_opus":0.02319793104021169,"score_gpt":0.28431612892457764,"score_spread":0.26111819788436597,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171116117","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9997435,0.000041137286,0.00003509523,0.0000042210795,4.5453814e-7,0.0000020210398,0.00004179419,0.0000013728667,0.00013034126],"genre_scores_gemma":[0.9997805,0.000020171428,0.00007587735,0.0000031458924,0.0000011881258,0.0000022313698,0.00007266941,7.602344e-7,0.00004348241],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995491,0.00014852597,0.000037577895,0.00015474009,0.00005887903,0.000051259252],"domain_scores_gemma":[0.9982951,0.00041250908,0.0007188388,0.00011991495,0.00019543168,0.00025828788],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006861587,0.00014562771,0.00020052906,0.00086715515,0.0002090672,0.0003944959,0.00027253345,0.00023415212,0.00087097345],"category_scores_gemma":[0.0018179752,0.00020563063,0.00017188741,0.000469165,0.00044678702,0.00033879786,0.00043109182,0.000251228,0.0001279363],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040407525,0.00002386278,0.9969118,0.0000056176823,0.00004615217,0.000044488144,0.00023780075,0.000048291884,0.0016762445,0.000016310245,0.000022332231,0.00092677854],"study_design_scores_gemma":[7.279008e-7,0.000023885405,0.99970967,7.9277817e-7,0.0000033725812,0.000060294882,0.00010073792,0.000052842657,0.000023001388,0.0000035305943,0.000020212477,9.048019e-7],"about_ca_topic_score_codex":0.004537742,"about_ca_topic_score_gemma":0.011482943,"teacher_disagreement_score":0.004537742,"about_ca_system_score_codex":0.00016265093,"about_ca_system_score_gemma":0.00008800349,"threshold_uncertainty_score":0.009022653},"labels":[],"label_agreement":null},{"id":"W2178585259","doi":"","title":"Epidemiological study of Yersinia enterocolitica in swine herds in Québec.","year":2000,"lang":"en","type":"article","venue":"PubMed","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Montréal","funders":"","keywords":"Yersinia enterocolitica; Pulsed-field gel electrophoresis; Feces; Serotype; Biology; Herd; Veterinary medicine; Barn; Yersinia; Genotype; Molecular epidemiology; Microbiology; Animal science; Geography; Bacteria; Medicine; Genetics","score_opus":0.024374518299938235,"score_gpt":0.28455077474967316,"score_spread":0.2601762564497349,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2178585259","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99761707,0.0004519761,0.00020774857,0.00009139799,0.0000059953504,0.000032302556,0.0008656806,0.000007453212,0.0007204606],"genre_scores_gemma":[0.9978269,0.00026193706,0.00029271396,0.00006409599,0.0000042880047,0.000015230654,0.00083488773,0.000002094064,0.0006977349],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996785,0.00005519058,0.000019098672,0.000060335853,0.00009686849,0.00009004577],"domain_scores_gemma":[0.99912316,0.000087696135,0.00023691123,0.000030436095,0.00032072898,0.00020101084],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004955603,0.00025973312,0.00021939205,0.0009469408,0.0011022703,0.00046201813,0.00044754238,0.000360372,0.0016800177],"category_scores_gemma":[0.0008196583,0.00020498384,0.00018511839,0.001388975,0.00045550344,0.00026589696,0.00026213782,0.00028114166,0.00014028963],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033092827,0.00002177155,0.9956405,0.000019490093,0.000022974296,0.00013823176,0.00022037064,0.000048334132,0.00094633776,0.00001938839,0.0002148361,0.0026745468],"study_design_scores_gemma":[0.0000022654358,0.000051721338,0.99880505,0.000010343132,0.0000061071523,0.00008428743,0.00030257172,0.00020644681,0.000044366567,0.0000033690767,0.00048140236,0.000002151109],"about_ca_topic_score_codex":0.92562765,"about_ca_topic_score_gemma":0.94744694,"teacher_disagreement_score":0.07437235,"about_ca_system_score_codex":0.0052530575,"about_ca_system_score_gemma":0.003934469,"threshold_uncertainty_score":0.14962065},"labels":[],"label_agreement":null},{"id":"W2204588640","doi":"10.3389/fmicb.2015.01198","title":"Phylogeography of Yersinia ruckeri reveals effects of past evolutionary events on the current strain distribution and explains variations in the global transmission of enteric redmouth (ERM) disease","year":2015,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Fondo Nacional de Ciencia Tecnología e Innovación; Ministerio de Ciencia e Innovación","keywords":"Yersinia ruckeri; Biology; Phylogeography; Population; Isolation by distance; Evolutionary biology; Gene flow; Genetics; Genetic variation; Phylogenetics; Gene; Demography; Fishery","score_opus":0.008766209198159514,"score_gpt":0.2548975483486856,"score_spread":0.2461313391505261,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2204588640","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99955195,0.00008097906,0.00016564877,0.0000100740035,2.6426267e-7,8.9415283e-7,0.00004121697,0.0000017580662,0.00014730929],"genre_scores_gemma":[0.999508,0.0000815878,0.00017326232,0.0000043317173,0.0000012911053,0.0000013789971,0.00015744421,0.0000013321743,0.000071300725],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998554,0.000039812017,0.000011923747,0.000051867748,0.000009228766,0.000031767133],"domain_scores_gemma":[0.999684,0.00009106149,0.00012722619,0.00003696436,0.000031745185,0.000029089293],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005056616,0.0001378096,0.00028020082,0.0009556217,0.00023857674,0.00034609306,0.00014595997,0.00025274974,0.0007576972],"category_scores_gemma":[0.0006508404,0.00011314566,0.00026080137,0.0006833754,0.00026269877,0.00030237722,0.0003241808,0.0002183228,0.00012938878],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048930215,0.000038550108,0.9203569,0.000040760115,0.00013031511,0.00028307,0.001073175,0.0017790507,0.062156387,0.00035995108,0.000058308713,0.013234301],"study_design_scores_gemma":[0.0000027017147,0.00003647548,0.9971269,0.000006708474,0.000020181034,0.00014568848,0.00019729689,0.001619775,0.0006015557,0.000058329693,0.00018039986,0.000004014172],"about_ca_topic_score_codex":0.0026245646,"about_ca_topic_score_gemma":0.00348314,"teacher_disagreement_score":0.0026245646,"about_ca_system_score_codex":0.0003013438,"about_ca_system_score_gemma":0.00014719003,"threshold_uncertainty_score":0.0052185655},"labels":[],"label_agreement":null},{"id":"W2222185627","doi":"","title":"Black Soapstone Carving of an Arctic Hare by Johnny Etok","year":2009,"lang":"en","type":"article","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Carving; Geography; Art; Archaeology","score_opus":0.008514116869488933,"score_gpt":0.2846040851451129,"score_spread":0.27608996827562393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2222185627","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97566354,0.0013037112,0.00057985395,0.0049709836,0.00087548565,0.00011810753,0.00024548764,0.0000474616,0.016195454],"genre_scores_gemma":[0.8897578,0.0027250196,0.0015218373,0.0030307,0.00014012704,0.000022196196,0.0003919766,0.000038890656,0.10237148],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998394,0.000012266085,0.000004990969,0.000041907242,0.000048610287,0.00005273694],"domain_scores_gemma":[0.99981827,0.000009284514,0.00001447607,0.0000055196006,0.00006484767,0.0000876429],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019063696,0.0006228544,0.00028464248,0.0004053705,0.003620724,0.00043293083,0.0004235697,0.00071756536,0.003644681],"category_scores_gemma":[0.0002917634,0.00031358656,0.00046475657,0.00017410866,0.00054016756,0.00028387146,0.00043996394,0.0010061307,0.00091029756],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031419008,0.0014386309,0.30557603,0.00037273348,0.00037524867,0.19390756,0.014802916,0.000953378,0.30054823,0.00097587873,0.099694654,0.0782129],"study_design_scores_gemma":[0.000034220382,0.002330665,0.84454226,0.00013177181,0.00016347459,0.03083732,0.022484045,0.000874422,0.020888997,0.00020161638,0.07738252,0.00012865821],"about_ca_topic_score_codex":0.4121667,"about_ca_topic_score_gemma":0.69993234,"teacher_disagreement_score":0.4121667,"about_ca_system_score_codex":0.0018948375,"about_ca_system_score_gemma":0.0014997557,"threshold_uncertainty_score":0.81953526},"labels":[],"label_agreement":null},{"id":"W2223081114","doi":"10.1007/s10816-015-9271-x","title":"Functionality and Morphology: Identifying Si Agricultural Tools from Among Hemudu Scapular Implements in Eastern China","year":2016,"lang":"en","type":"article","venue":"Journal of Archaeological Method and Theory","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Morphology (biology); China; Agriculture; Geography; Computer science; Biology; Agroforestry; Evolutionary biology; Ecology; Paleontology; Archaeology","score_opus":0.03237578998606436,"score_gpt":0.33240850831712687,"score_spread":0.3000327183310625,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2223081114","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99909675,0.00009685922,0.00026405332,0.000007925457,0.0000011771886,0.00001381336,0.0001352386,0.0000027504843,0.00038135384],"genre_scores_gemma":[0.9980106,0.00010578251,0.0011152457,0.00001024361,0.0000022200838,0.00002525773,0.0003497559,0.000003788112,0.00037711207],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99960834,0.00005426546,0.000039605475,0.00012750698,0.00007852788,0.0000918698],"domain_scores_gemma":[0.99959475,0.00007659539,0.00010369268,0.000057846028,0.000116872245,0.000050245802],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005433285,0.0004781603,0.00039380582,0.0037564486,0.001036063,0.00055875466,0.0006169075,0.00041686968,0.0008382545],"category_scores_gemma":[0.00069622207,0.00025056535,0.00033208687,0.0045005498,0.0011216978,0.0005066275,0.0010632267,0.00014718203,0.00017638857],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008541055,0.000032956912,0.9349507,0.00021479072,0.000047710084,0.00096826267,0.01388315,0.00022642997,0.010463648,0.00021670255,0.0002229163,0.03868733],"study_design_scores_gemma":[0.0000016841158,0.00003115622,0.9920597,0.000019930872,0.000019356705,0.00026009924,0.005888244,0.00030382592,0.0005788724,0.000063480664,0.00076337886,0.000010180898],"about_ca_topic_score_codex":0.020133587,"about_ca_topic_score_gemma":0.07033681,"teacher_disagreement_score":0.020133587,"about_ca_system_score_codex":0.0006400409,"about_ca_system_score_gemma":0.00074179884,"threshold_uncertainty_score":0.040032804},"labels":[],"label_agreement":null},{"id":"W2253947615","doi":"10.1128/iai.00843-15","title":"Uncovering an Important Role for YopJ in the Inhibition of Caspase-1 in Activated Macrophages and Promoting Yersinia pseudotuberculosis Virulence","year":2016,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Institutes of Health","keywords":"Yersinia pseudotuberculosis; Biology; Microbiology; Effector; Yersinia; Yersinia pestis; Mutant; Type three secretion system; Inflammasome; Innate immune system; Secretion; Virulence; Cell biology; Immune system; Inflammation; Bacteria; Immunology; Gene; Biochemistry","score_opus":0.01161883740269386,"score_gpt":0.28127172634997977,"score_spread":0.2696528889472859,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2253947615","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969086,0.00044204772,0.002018222,0.00010701531,0.000008673139,0.00001231294,0.00015146483,0.000029997573,0.00032164395],"genre_scores_gemma":[0.99690765,0.00025742588,0.0019208667,0.00003165974,0.0000036328074,0.000017425957,0.0001468032,0.00000913232,0.0007052608],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989307,0.000020617923,0.000012886934,0.000020714991,0.000026414926,0.000026202788],"domain_scores_gemma":[0.9998753,0.000023078042,0.000041305902,0.000014150969,0.000011477642,0.000034586672],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015320437,0.00037160006,0.00028788095,0.00024871906,0.00017048058,0.00026843525,0.00030345444,0.00040609663,0.000904776],"category_scores_gemma":[0.00014441801,0.00015111757,0.0002669893,0.00018281073,0.00030057452,0.00025196467,0.00040333215,0.00048845855,0.00019692404],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010130338,0.000014041937,0.0003091826,0.000021309908,0.0000022757984,0.00009138523,0.000008672331,0.000045468594,0.99895704,0.000070184185,0.000007203314,0.00037188327],"study_design_scores_gemma":[0.00006013249,0.0004683465,0.036029004,0.000014976672,0.000036752153,0.0015774115,0.00019870226,0.0043456084,0.95529896,0.00027500864,0.0016808338,0.0000141965265],"about_ca_topic_score_codex":0.00048327885,"about_ca_topic_score_gemma":0.00062068255,"teacher_disagreement_score":0.000904776,"about_ca_system_score_codex":0.00025110345,"about_ca_system_score_gemma":0.00025864973,"threshold_uncertainty_score":0.0030267239},"labels":[],"label_agreement":null},{"id":"W2257156795","doi":"10.7554/elife.12994","title":"Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focus","year":2016,"lang":"en","type":"article","venue":"eLife","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":168,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Medical Research Council; European Research Council; Social Sciences and Humanities Research Council of Canada; National Health and Medical Research Council; Natural Sciences and Engineering Research Council of Canada; McMaster University","keywords":"Yersinia pestis; Plague (disease); Outbreak; Pandemic; Lineage (genetic); Biology; Epidemic disease; Extant taxon; Disease; Virology; Geography; Evolutionary biology; Zoology; History; Infectious disease (medical specialty); Ancient history; Coronavirus disease 2019 (COVID-19); Genetics; Virulence; Medicine; Gene","score_opus":0.020215805914292093,"score_gpt":0.26571821459465517,"score_spread":0.24550240868036308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2257156795","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968142,0.0010196628,0.00045304885,0.000107225926,0.00000859766,0.0000025217673,0.0010244448,0.000015843163,0.0005544734],"genre_scores_gemma":[0.9930127,0.0007690539,0.001770953,0.00010855036,0.000012877692,0.000005723833,0.0033243012,0.000017350458,0.0009783285],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999285,0.000007886707,0.00000433798,0.000022082162,0.000011322014,0.000025914544],"domain_scores_gemma":[0.9998111,0.00002671116,0.00008364247,0.000013535125,0.000031310607,0.000033594068],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017982641,0.0002559171,0.0002238857,0.0006945411,0.00049831637,0.00061250234,0.000117188334,0.00044947263,0.0009481252],"category_scores_gemma":[0.00039937734,0.00014548961,0.00021519857,0.00070036063,0.00024086758,0.0004727954,0.0005332779,0.00039941352,0.00023984391],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010567531,0.00005937231,0.21243176,0.00030926737,0.00018033781,0.0015391116,0.0036970554,0.00075410394,0.750762,0.00095311436,0.0007071441,0.027550055],"study_design_scores_gemma":[0.00001747847,0.00013174966,0.9552553,0.000059897036,0.000082845654,0.0012211907,0.0014406922,0.00046644054,0.020291565,0.00038836847,0.020620259,0.00002421749],"about_ca_topic_score_codex":0.0020895167,"about_ca_topic_score_gemma":0.0041043884,"teacher_disagreement_score":0.0020895167,"about_ca_system_score_codex":0.0003412472,"about_ca_system_score_gemma":0.00019701007,"threshold_uncertainty_score":0.004154682},"labels":[],"label_agreement":null},{"id":"W2269762935","doi":"","title":"Un lièvre arctique brun","year":2009,"lang":"fr","type":"article","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Geography","score_opus":0.008328213832973955,"score_gpt":0.2775537338913312,"score_spread":0.26922552005835726,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2269762935","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4735484,0.036129493,0.010385501,0.014080358,0.0047565205,0.00046953792,0.0052775843,0.0011945218,0.45415798],"genre_scores_gemma":[0.583159,0.0082907425,0.012650674,0.002056501,0.00046391925,0.00019899111,0.0024655608,0.00027492872,0.39043963],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99895453,0.00017185534,0.000030298448,0.00022674155,0.00032439388,0.00029223846],"domain_scores_gemma":[0.9988845,0.00025466812,0.000118368436,0.00005600893,0.00036249423,0.0003240063],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007469719,0.00090877153,0.0006783883,0.0016164845,0.006279741,0.0023889032,0.00071140594,0.0013138396,0.019403465],"category_scores_gemma":[0.0015913941,0.0005450761,0.0006486811,0.0015100468,0.001267979,0.0010229718,0.0015571853,0.004311493,0.0026675493],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006045396,0.000722396,0.18562068,0.0016643599,0.0006857927,0.02820004,0.017117739,0.00795379,0.07382251,0.10034087,0.09167188,0.48615453],"study_design_scores_gemma":[0.00017911443,0.0003107217,0.1288093,0.00034564678,0.00004942125,0.0047555654,0.0053132703,0.0007675932,0.004711821,0.001541858,0.8530486,0.00016705031],"about_ca_topic_score_codex":0.62449735,"about_ca_topic_score_gemma":0.7226015,"teacher_disagreement_score":0.62449735,"about_ca_system_score_codex":0.007407143,"about_ca_system_score_gemma":0.008409148,"threshold_uncertainty_score":0.7554281},"labels":[],"label_agreement":null},{"id":"W2288592558","doi":"","title":"Dynamics of disease : origins and ecology of avian cholera in the eastern Canadian arctic","year":2015,"lang":"en","type":"article","venue":"University Library - University of Saskatchewan (University of Saskatchewan)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Ecology; Cholera; Arctic; Geography; Biology","score_opus":0.00860464095555476,"score_gpt":0.18744011976528183,"score_spread":0.17883547880972706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2288592558","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99702114,0.00058734155,0.00010026371,0.00021368325,0.0000061635305,0.000007313331,0.00064663327,0.000004482828,0.0014129705],"genre_scores_gemma":[0.99848074,0.0004900792,0.00012681604,0.000024806714,0.000003219193,0.0000031658221,0.00025353598,0.000003120262,0.00061455026],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996013,0.000039153154,0.000020397569,0.00006921275,0.000078943085,0.00019105223],"domain_scores_gemma":[0.9987929,0.00007974941,0.00020845453,0.000028384155,0.00059922476,0.0002912092],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052226364,0.00023072264,0.00019467814,0.0022069602,0.0029489135,0.0012579765,0.00076889095,0.00041495246,0.0016923066],"category_scores_gemma":[0.0008952718,0.00028405205,0.00027032988,0.0028975043,0.0011120553,0.00043855555,0.00082910794,0.00045012182,0.0001420724],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013510205,0.00002665086,0.98494625,0.000036182137,0.000045827317,0.00013519186,0.003415366,0.0003716203,0.0016935327,0.0004855492,0.00040266418,0.008306173],"study_design_scores_gemma":[0.0000014430352,0.000008505123,0.9952023,0.000016282243,0.000009091441,0.000052310897,0.0036111649,0.00021500445,0.00005944947,0.00003994565,0.00077650876,0.000007947252],"about_ca_topic_score_codex":0.9888362,"about_ca_topic_score_gemma":0.99503326,"teacher_disagreement_score":0.015573819,"about_ca_system_score_codex":0.015573819,"about_ca_system_score_gemma":0.016210908,"threshold_uncertainty_score":0.11299652},"labels":[],"label_agreement":null},{"id":"W2299937302","doi":"10.7717/peerj.2216","title":"Detection of a <i>Yersinia pestis</i> gene homologue in rodent samples","year":2016,"lang":"en","type":"article","venue":"PeerJ","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Seventh Framework Programme; London School of Hygiene and Tropical Medicine","keywords":"Yersinia pestis; Rodent; Biology; Gene; Yersinia; Genetics; Microbiology; Bacteria; Virulence; Ecology","score_opus":0.014885897443742269,"score_gpt":0.26454291327181423,"score_spread":0.24965701582807195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2299937302","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99195707,0.0007967744,0.0030321174,0.00006398163,0.000016311573,0.000040719067,0.0025993707,0.0000903735,0.0014032981],"genre_scores_gemma":[0.9765351,0.0012265312,0.0103588905,0.00016610816,0.000021142221,0.00013345842,0.0081727905,0.00005345002,0.0033325665],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99983966,0.000012848254,0.000010567961,0.00006619359,0.000034001572,0.000036638077],"domain_scores_gemma":[0.9998134,0.000035975805,0.000060625076,0.000012516158,0.000047149482,0.00003032149],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015543435,0.0002982708,0.00027368515,0.0006489999,0.00023635248,0.0002928508,0.00011303297,0.00025597983,0.001060271],"category_scores_gemma":[0.0002539682,0.00018927961,0.000199542,0.00044226422,0.00021342676,0.000108987915,0.00014315432,0.00023455298,0.0004932257],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000092144,0.000008019841,0.0053505297,0.000038674847,0.000008994121,0.00007428804,0.00003413219,0.0000104386,0.9933003,0.000012343142,0.000028038727,0.00104208],"study_design_scores_gemma":[0.000014697173,0.0007198422,0.46391827,0.00002304241,0.00007860459,0.0019571728,0.00034602403,0.00028124353,0.52751607,0.000053099004,0.005080659,0.000011257273],"about_ca_topic_score_codex":0.0008796649,"about_ca_topic_score_gemma":0.0017083788,"teacher_disagreement_score":0.001060271,"about_ca_system_score_codex":0.00009992221,"about_ca_system_score_gemma":0.00012808206,"threshold_uncertainty_score":0.0035469532},"labels":[],"label_agreement":null},{"id":"W2317375905","doi":"10.1139/cjm-2012-0705","title":"Cyclic AMP receptor protein is a repressor of adenylyl cyclase gene<i>cyaA</i>in<i>Yersinia pestis</i>","year":2013,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Adenylyl cyclase; cAMP receptor protein; Biology; Yersinia pestis; Repressor; Promoter; Gene; Molecular biology; Biochemistry; Receptor; Virulence; Transcription factor; Gene expression","score_opus":0.00972983871551705,"score_gpt":0.23320870154400658,"score_spread":0.22347886282848953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2317375905","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97000855,0.008332136,0.011994586,0.00059415854,0.00016388173,0.00010159969,0.0019047337,0.0005083043,0.0063919835],"genre_scores_gemma":[0.9794414,0.0014310171,0.008137028,0.00016482212,0.000036043828,0.00006535707,0.0031277174,0.000052107298,0.007544412],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998116,0.000025615913,0.000009657765,0.00005520993,0.000055695346,0.000042287145],"domain_scores_gemma":[0.99989617,0.000022951748,0.000030021147,0.000009876169,0.00001575502,0.000025173737],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000118761694,0.0004155439,0.000304091,0.00025779544,0.00030839717,0.0002825457,0.00022528956,0.00031166858,0.0018966626],"category_scores_gemma":[0.00021133233,0.00018697411,0.00035218906,0.00021395221,0.00031885624,0.00014704274,0.00021622097,0.0005599999,0.0008864161],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034005046,0.000006971672,0.00010690172,0.000022736414,0.0000015274576,0.000041813044,0.000009142712,0.000017388727,0.9989772,0.000094898365,0.00005387689,0.00063343917],"study_design_scores_gemma":[0.000018652056,0.00018119955,0.013154379,0.000015643342,0.000015229346,0.000940071,0.000045305933,0.0010251873,0.9751883,0.00018903037,0.009212055,0.000014971148],"about_ca_topic_score_codex":0.002481703,"about_ca_topic_score_gemma":0.002253637,"teacher_disagreement_score":0.002481703,"about_ca_system_score_codex":0.00073329645,"about_ca_system_score_gemma":0.0004430588,"threshold_uncertainty_score":0.0063449144},"labels":[],"label_agreement":null},{"id":"W2320289577","doi":"10.1386/jafp.6.2.125_1","title":"Eurhythmatic analysis: A rhetoric of adaptation","year":2013,"lang":"en","type":"article","venue":"Journal of Adaptation in Film & Performance","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Thompson Rivers University","funders":"","keywords":"Rhetoric; Rhetorical question; Adaptation (eye); Metaphor; Ambiguity; Sociology; Aesthetics; Epistemology; Context (archaeology); History; Linguistics; Philosophy; Psychology","score_opus":0.016401710719022976,"score_gpt":0.25893649251621054,"score_spread":0.24253478179718757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2320289577","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11623359,0.011054471,0.12203402,0.08707887,0.004591646,0.00013275514,0.000114616945,0.00042764575,0.6583324],"genre_scores_gemma":[0.9779298,0.0009961354,0.0061526448,0.0018653561,0.00078424136,0.000058393394,0.000027150687,0.0001336814,0.012052636],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.98997986,0.00797114,0.00018747817,0.0005952944,0.00095610635,0.0003100768],"domain_scores_gemma":[0.98680496,0.009940404,0.00080909376,0.0011395686,0.0009881067,0.00031785562],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.010477393,0.00051929126,0.00047876252,0.0029842416,0.005380514,0.0063775787,0.0014020397,0.0021361508,0.005218091],"category_scores_gemma":[0.01608185,0.0002721196,0.00028697719,0.0015567576,0.03825063,0.010557769,0.0058725053,0.004447731,0.00055529416],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035245423,0.000010084182,0.00019019365,0.0000684735,0.0000039412384,0.00013728377,0.040558357,0.000089812245,0.00068140327,0.94870883,0.002223498,0.0072929123],"study_design_scores_gemma":[0.000035253073,0.00012155254,0.0014501434,0.0004931242,0.000023191407,0.0007652673,0.053518455,0.0022118553,0.002573725,0.5044938,0.43426698,0.000046739133],"about_ca_topic_score_codex":0.00073313573,"about_ca_topic_score_gemma":0.00060603354,"teacher_disagreement_score":0.010477393,"about_ca_system_score_codex":0.0036031047,"about_ca_system_score_gemma":0.0013059679,"threshold_uncertainty_score":0.055410445},"labels":[],"label_agreement":null},{"id":"W2320326722","doi":"10.1155/2000/782978","title":"The First Smallpox Epidemic on the Canadian Plains: In the Fur‐traders′ Words","year":2000,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Health Sciences Centre; University of Alberta Hospital; University of Saskatchewan","funders":"","keywords":"Smallpox; Fur trade; Bay; Compassion; Isolation (microbiology); Geography; Demography; History; Socioeconomics; Archaeology; Medicine; Virology; Law; Economic history; Sociology; Biology; Political science; Vaccination","score_opus":0.007303856532578281,"score_gpt":0.23457218644874556,"score_spread":0.22726832991616727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2320326722","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1399425,0.18815537,0.0011250551,0.42717925,0.02198757,0.00015348969,0.0016512112,0.0002555109,0.21955007],"genre_scores_gemma":[0.4613749,0.19323637,0.0018965272,0.09385645,0.0047601317,0.000035914156,0.0009894506,0.00013270669,0.24371752],"study_design_codex":"not_applicable","study_design_gemma":"qualitative","domain_scores_codex":[0.99940753,0.000021927282,0.000011011817,0.00005153062,0.0002556,0.00025253688],"domain_scores_gemma":[0.99942064,0.000040384166,0.000032113836,0.00001707843,0.00031914117,0.00017055734],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053535326,0.000708685,0.00027035052,0.0008124007,0.0068086246,0.0050039347,0.00084060413,0.0016634301,0.004111479],"category_scores_gemma":[0.0013389323,0.00022789136,0.00026452975,0.001407796,0.005599191,0.0015179146,0.00096052955,0.002637637,0.00056073884],"study_design_candidate":"qualitative","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00058226835,0.00015866688,0.026550708,0.00090193,0.00009182006,0.003856337,0.024735535,0.00060371426,0.01698958,0.0557119,0.6416619,0.22815567],"study_design_scores_gemma":[0.000009821532,0.000022437674,0.023972264,0.00021192561,0.000021659207,0.0002636808,0.009053999,0.000055183384,0.0009412738,0.0021253978,0.96327037,0.000052035342],"about_ca_topic_score_codex":0.9735492,"about_ca_topic_score_gemma":0.9838357,"teacher_disagreement_score":0.04042729,"about_ca_system_score_codex":0.04042729,"about_ca_system_score_gemma":0.049184628,"threshold_uncertainty_score":0.2933219},"labels":[],"label_agreement":null},{"id":"W2327155179","doi":"","title":"Expression and identification of Yersinia pestis antigen gene LcrV in Lactococcus metis.","year":2010,"lang":"en","type":"article","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Yersinia pestis; Lactococcus lactis; Biology; Microbiology; Yersinia; Virology; Antigen; Plasmid; Yersinia enterocolitica; Recombinant DNA; Lactococcus; Yersinia pseudotuberculosis; Gene; Bacteria; Genetics; Virulence","score_opus":0.007679586921825697,"score_gpt":0.2818323851154356,"score_spread":0.27415279819360994,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2327155179","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98644257,0.0019757391,0.0083572585,0.00034412657,0.000035840145,0.0000755687,0.0009384277,0.000101371596,0.0017290056],"genre_scores_gemma":[0.9730532,0.0011255305,0.016857337,0.000069827125,0.000015920277,0.000056435347,0.0034486903,0.000039037077,0.0053339764],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999057,0.0000125879915,0.000012525027,0.000018978699,0.000030480509,0.000019632942],"domain_scores_gemma":[0.9999087,0.000016149297,0.000030930674,0.000009927512,0.000014681123,0.000019655408],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015366903,0.00028854288,0.00022606354,0.0002013621,0.00014095525,0.00027410765,0.00018218759,0.00022429295,0.00079808134],"category_scores_gemma":[0.00017847845,0.000109202425,0.00025685603,0.00021729484,0.00017750176,0.00017676063,0.00021724326,0.00043311281,0.00062780106],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004106346,0.000013798221,0.00023138178,0.00003181274,0.0000019156664,0.000046105833,0.000015292038,0.000035549936,0.99859387,0.00006591457,0.000019241485,0.0009040469],"study_design_scores_gemma":[0.000014169029,0.00019384405,0.004006364,0.000013705802,0.000020205583,0.0005204299,0.000054259475,0.0007920597,0.98948485,0.000056673256,0.004839285,0.0000042199667],"about_ca_topic_score_codex":0.0013198648,"about_ca_topic_score_gemma":0.001135919,"teacher_disagreement_score":0.0013198648,"about_ca_system_score_codex":0.00056114304,"about_ca_system_score_gemma":0.000266888,"threshold_uncertainty_score":0.0040714145},"labels":[],"label_agreement":null},{"id":"W2337783780","doi":"","title":"EVALUATION OF PACIFIC SARDINE (SARDINOPS SAGAX) STOCK ASSESSMENT AND HARVEST GUIDELINES IN BRITISH COLUMBIA","year":2011,"lang":"en","type":"article","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Sardine; Stock assessment; Fishery; Stock (firearms); Oceanography; Geography; Fishing; Geology; Archaeology; Biology; Fish <Actinopterygii>","score_opus":0.0843732343592938,"score_gpt":0.36424638814845367,"score_spread":0.2798731537891599,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2337783780","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9613778,0.00055934663,0.0010714754,0.0009641087,0.000036978614,0.0006469529,0.0011740392,0.00008535581,0.034083974],"genre_scores_gemma":[0.97530735,0.00058434386,0.0062055252,0.00034493327,0.0000049674504,0.00021344436,0.00122217,0.000018661058,0.016098456],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981943,0.00033706275,0.00015566514,0.00011886688,0.00095340726,0.00024083094],"domain_scores_gemma":[0.99163544,0.0008393212,0.0004829237,0.00015575028,0.006310905,0.0005757817],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0049016248,0.00025134993,0.00017650363,0.0019775925,0.0019485265,0.0013855848,0.0011939837,0.0004313485,0.0020452188],"category_scores_gemma":[0.0066872556,0.00018899323,0.00015781201,0.001364245,0.00040840192,0.00044557697,0.00056534034,0.00038180698,0.0002738133],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001786501,0.00076157006,0.68415666,0.00033261965,0.000120970064,0.0008236083,0.00488154,0.0072316,0.025469154,0.0016081514,0.014808975,0.2580187],"study_design_scores_gemma":[0.000060522034,0.00066467543,0.9608715,0.00021009968,0.00008906384,0.00009374855,0.0063604824,0.0055982387,0.006540814,0.00015915216,0.019305324,0.000046456018],"about_ca_topic_score_codex":0.89315194,"about_ca_topic_score_gemma":0.97261673,"teacher_disagreement_score":0.9782887,"about_ca_system_score_codex":0.021711295,"about_ca_system_score_gemma":0.023344807,"threshold_uncertainty_score":0.21495456},"labels":[],"label_agreement":null},{"id":"W2391829685","doi":"10.1098/rspb.2016.0618","title":"Epidemiological analysis of the Eyam plague outbreak of 1665–1666","year":2016,"lang":"en","type":"article","venue":"Proceedings of the Royal Society B Biological Sciences","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; Medical Research Council; National Institute for Health and Care Research","keywords":"Plague (disease); Yersinia pestis; Outbreak; Transmission (telecommunications); Epidemiology; Geography; Yersiniosis; Infectious disease (medical specialty); Demography; Pandemic; Quarter (Canadian coin); Poverty; Environmental health; Disease; Virology; Medicine; Socioeconomics; Coronavirus disease 2019 (COVID-19); Biology; Archaeology; Political science; Sociology; Law","score_opus":0.030900644019281942,"score_gpt":0.2973311876456925,"score_spread":0.26643054362641055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2391829685","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993974,0.000027779795,0.000093986884,0.000019434898,0.0000018559778,0.000005571219,0.0001633354,0.0000020150003,0.00028850313],"genre_scores_gemma":[0.9984189,0.000050921102,0.0003687179,0.000010591277,0.0000050246344,0.0000072340245,0.00091980444,0.0000014251038,0.00021733473],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998134,0.00006794124,0.000017083137,0.000033836906,0.000028479024,0.00003934921],"domain_scores_gemma":[0.9993718,0.0001657526,0.00020945621,0.000046212743,0.00011976012,0.00008710874],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041101995,0.000176184,0.00018703938,0.000886673,0.00032668922,0.0003844425,0.00020682202,0.00036593224,0.0009976774],"category_scores_gemma":[0.0014379326,0.00010065256,0.0002702572,0.0011129567,0.00016509158,0.00021738374,0.0004103442,0.00033705932,0.00014806249],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007138435,0.00019945331,0.9760878,0.00006992461,0.00019194321,0.0016356886,0.0009542657,0.0049314466,0.005085242,0.0004725562,0.00069600315,0.008961771],"study_design_scores_gemma":[0.0000055781584,0.00006323128,0.991608,0.0000074673626,0.0000141696455,0.00022948938,0.0004123665,0.0066839703,0.00032203554,0.00004160891,0.00060402346,0.000008080877],"about_ca_topic_score_codex":0.016879268,"about_ca_topic_score_gemma":0.013091696,"teacher_disagreement_score":0.016879268,"about_ca_system_score_codex":0.000454403,"about_ca_system_score_gemma":0.00023009874,"threshold_uncertainty_score":0.033562005},"labels":[],"label_agreement":null},{"id":"W2407259176","doi":"10.1128/iai.00324-16","title":"Distribution and Evolution of Yersinia Leucine-Rich Repeat Proteins","year":2016,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Natural Science Foundation of China","keywords":"Biology; Leucine; Yersinia; Bacterial protein; Microbiology; Computational biology; Bacteria; Genetics; Amino acid","score_opus":0.009746071840530597,"score_gpt":0.2598600700294204,"score_spread":0.2501139981888898,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2407259176","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99408615,0.0034996697,0.00077754416,0.00005050323,0.000003428172,0.000008444646,0.00044000702,0.000021626976,0.0011125816],"genre_scores_gemma":[0.9936464,0.0021281026,0.0020317596,0.000036908626,0.000010846813,0.000012856401,0.0012802939,0.000013484653,0.000839343],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99977773,0.00002590525,0.000023242363,0.00009460198,0.000040250572,0.000038297603],"domain_scores_gemma":[0.99974316,0.00002697601,0.00010437454,0.00001528857,0.00006469864,0.000045394932],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002147421,0.00022243397,0.00025785912,0.001516303,0.0002503822,0.00049525005,0.0002504691,0.00042141197,0.00037852096],"category_scores_gemma":[0.00032435142,0.00016899033,0.00025660073,0.0012840935,0.00017518108,0.00035581173,0.00029442526,0.00027292556,0.0003165863],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00070309633,0.00010097342,0.20026858,0.00024210809,0.00010467351,0.0009461611,0.0005643867,0.0014080318,0.7499245,0.000856889,0.0003228291,0.044557758],"study_design_scores_gemma":[0.000019153698,0.00020821493,0.9518559,0.000038664166,0.0000793552,0.0018651917,0.0004535248,0.004228052,0.03431008,0.00038842246,0.0065164324,0.000037044076],"about_ca_topic_score_codex":0.0012717788,"about_ca_topic_score_gemma":0.0007484019,"teacher_disagreement_score":0.001516303,"about_ca_system_score_codex":0.0003601757,"about_ca_system_score_gemma":0.00019845006,"threshold_uncertainty_score":0.0026132464},"labels":[],"label_agreement":null},{"id":"W2409083645","doi":"10.7146/ht.v115i1.56729","title":"Hvorfor forsvandt spedalskhed fra Danmark i slutningen af middelalderen?","year":2015,"lang":"da","type":"article","venue":"Historisk Tidsskrift","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Leprosy; Tuberculosis; Disease; Demography; Urbanization; Quarter (Canadian coin); Mycobacterium leprae; Medicine; Geography; Immunology; Biology; Pathology; Ecology; Archaeology; Sociology","score_opus":0.04408172956540271,"score_gpt":0.2969041544318002,"score_spread":0.2528224248663975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409083645","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4401208,0.18508822,0.0022519333,0.12266078,0.010499079,0.000077476056,0.0076075383,0.00026727226,0.23142691],"genre_scores_gemma":[0.8418225,0.032610558,0.0022065698,0.009297721,0.00068083743,0.000040044582,0.0025085085,0.0002304932,0.110602826],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9980634,0.00029970022,0.00013464983,0.00059409614,0.00043423733,0.00047387427],"domain_scores_gemma":[0.99915504,0.00014648157,0.00013927658,0.000052292366,0.0001903618,0.00031658192],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024576695,0.00028559336,0.0006133827,0.0007539737,0.0020002848,0.005397577,0.0007717086,0.0018766408,0.014503402],"category_scores_gemma":[0.003032459,0.00039275122,0.0006031564,0.00052042055,0.0011764814,0.0021055439,0.0016718657,0.0020627622,0.0040409877],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019136065,0.00060524046,0.18104969,0.0026598738,0.00050208165,0.004559213,0.024291407,0.0012953804,0.004819497,0.08680944,0.21794169,0.4735529],"study_design_scores_gemma":[0.000052658303,0.00011624009,0.08920468,0.0012437693,0.00006655097,0.0006400083,0.010553861,0.00019993845,0.00094370457,0.0039984696,0.89290285,0.00007733142],"about_ca_topic_score_codex":0.06551031,"about_ca_topic_score_gemma":0.06334205,"teacher_disagreement_score":0.06551031,"about_ca_system_score_codex":0.003585198,"about_ca_system_score_gemma":0.0033860852,"threshold_uncertainty_score":0.13025796},"labels":[],"label_agreement":null},{"id":"W2411344081","doi":"","title":"[The epidemic typhus of 1813/14 in the area of lower Franconia].","year":2004,"lang":"en","type":"article","venue":"PubMed","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Typhus; Battle; German; Quarter (Canadian coin); Epidemic disease; History; Fell; Ancient history; Demography; Geography; Medicine; Cartography; Virology; Archaeology; Sociology","score_opus":0.017314688921992276,"score_gpt":0.2497473457633096,"score_spread":0.2324326568413173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411344081","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.36311087,0.07853232,0.00087237067,0.20354316,0.03981811,0.00027986325,0.014967006,0.00028336546,0.29859293],"genre_scores_gemma":[0.6692714,0.018318817,0.0006570927,0.039485324,0.004709161,0.00013154869,0.0048303916,0.00006619946,0.2625301],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99987113,0.000014938559,0.000006867783,0.000020728092,0.000020252312,0.00006598711],"domain_scores_gemma":[0.9998841,0.000008207923,0.00003662577,0.0000042744155,0.00002789455,0.000038911814],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023645979,0.00057212077,0.00010717977,0.0005940619,0.0028275696,0.0010499972,0.00035697693,0.0013167365,0.009352899],"category_scores_gemma":[0.00041347826,0.00014565146,0.00025182415,0.00063232036,0.0008858939,0.00058570935,0.00064621837,0.0013757423,0.0011221439],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028129193,0.0000667585,0.071038544,0.00074850797,0.00007272376,0.011433221,0.027553106,0.00018004641,0.0019174744,0.013712397,0.7691577,0.10383833],"study_design_scores_gemma":[0.000017566657,0.000055041146,0.17608345,0.00025676104,0.000014024059,0.0016638718,0.006247585,0.000058018282,0.000109207554,0.0003812969,0.81508327,0.000030021312],"about_ca_topic_score_codex":0.47827867,"about_ca_topic_score_gemma":0.5932785,"teacher_disagreement_score":0.47827867,"about_ca_system_score_codex":0.0036469882,"about_ca_system_score_gemma":0.0026528714,"threshold_uncertainty_score":0.95098954},"labels":[],"label_agreement":null},{"id":"W2411805202","doi":"10.1139/w11-028","title":"Transcriptional regulation of <i>ompF2</i>, an <i>ompF</i> paralogue, in <i>Yersinia pestis</i>","year":2011,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Natural Science Foundation of China","keywords":"Biology; Yersinia pestis; Osmotic concentration; Transcription (linguistics); Mutant; Regulator; Transcriptional regulation; Bacterial outer membrane; rpoS; Microbiology; Cell biology; Genetics; Transcription factor; Gene; Gene expression; Virulence; Promoter; Escherichia coli; Biochemistry","score_opus":0.02357742908197052,"score_gpt":0.2347447252302008,"score_spread":0.21116729614823027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411805202","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997324,0.000276774,0.0014746514,0.00006078996,0.000014872918,0.000012941078,0.0003252737,0.000059130067,0.00045169945],"genre_scores_gemma":[0.99620783,0.00013600283,0.0016292456,0.00004315795,0.0000075900493,0.000020824928,0.00074495503,0.00003439257,0.0011759836],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984944,0.000026573327,0.000008601646,0.000042313357,0.00003412086,0.00003900956],"domain_scores_gemma":[0.9998785,0.000029260518,0.000033107757,0.000013173162,0.000018775158,0.000027051905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014468582,0.00043124246,0.00021702111,0.00015393065,0.00013471591,0.0002897034,0.00015313645,0.00031115348,0.000510757],"category_scores_gemma":[0.00020047533,0.00013566896,0.0002504087,0.000104366874,0.00031152213,0.00017472751,0.00026898296,0.00040793634,0.00030208562],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000087226144,0.000015669002,0.00019697362,0.000008805882,0.0000010610071,0.00003127055,0.000012877519,0.00002427277,0.9992531,0.000033320644,0.000016258866,0.00031916378],"study_design_scores_gemma":[0.000013820189,0.00017485133,0.008195528,0.0000037500822,0.0000065309787,0.00023100503,0.000059074067,0.0010432221,0.9894566,0.000038689734,0.0007691595,0.000007896609],"about_ca_topic_score_codex":0.00086933555,"about_ca_topic_score_gemma":0.00079381006,"teacher_disagreement_score":0.00086933555,"about_ca_system_score_codex":0.00044263664,"about_ca_system_score_gemma":0.00020889723,"threshold_uncertainty_score":0.0032115579},"labels":[],"label_agreement":null},{"id":"W2413533011","doi":"","title":"A taxonomic review of the Ceratophyllus Curtis, 1832 of North America (Siphonaptera: Ceratophyllidae: Ceratophyllinae).","year":2001,"lang":"en","type":"review","venue":"PubMed","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Subgenus; Biology; NOMINATE; Taxon; Zoology; Genus; Taxonomy (biology); Flea; Ecology","score_opus":0.029566444908978175,"score_gpt":0.2764109024397411,"score_spread":0.24684445753076292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413533011","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00052629894,0.9917241,0.0003631819,0.00036493104,0.0007408621,0.000022947235,0.00013313147,0.00003243194,0.00609214],"genre_scores_gemma":[0.0019738444,0.99206674,0.0009005233,0.00040298962,0.00028713516,0.000022649398,0.00027593144,0.000004448462,0.0040657315],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998117,0.00002516777,0.00003613247,0.000032341002,0.00007986799,0.000014788993],"domain_scores_gemma":[0.9997819,0.00005723059,0.0000393027,0.000007523505,0.0000845869,0.000029444336],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028300725,0.0009478593,0.0011665946,0.0035653913,0.00045828274,0.00059886655,0.0007323219,0.0005202561,0.007010531],"category_scores_gemma":[0.0005953347,0.00026294508,0.00028718275,0.004430039,0.00036763144,0.0016641185,0.00055254815,0.0006281303,0.0043565375],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034634206,0.000026189084,0.00047181308,0.016026367,0.00005138549,0.00061051967,0.00017825417,0.00011102157,0.0016759568,0.00086842704,0.07519179,0.9047536],"study_design_scores_gemma":[0.00000600092,0.00004335621,0.0043492834,0.00394363,0.000080572856,0.003384095,0.00013057006,0.000024754045,0.00018529998,0.0004699455,0.98737085,0.000011681558],"about_ca_topic_score_codex":0.004225488,"about_ca_topic_score_gemma":0.015462964,"teacher_disagreement_score":0.007010531,"about_ca_system_score_codex":0.00045821982,"about_ca_system_score_gemma":0.0018136427,"threshold_uncertainty_score":0.02345252},"labels":[],"label_agreement":null},{"id":"W2416518252","doi":"","title":"Multispecies Epidemiologic Surveillance Study after an Outbreak of Yersiniosis at an African Green Monkey Research Facility.","year":2015,"lang":"en","type":"article","venue":"PubMed","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Yersiniosis; Yersinia enterocolitica; Outbreak; Seroprevalence; Yersinia; Feces; Veterinary medicine; Population; Biology; Zoonosis; Yersinia Infections; Virology; Microbiology; Medicine; Antibody; Serology; Immunology; Environmental health; Enterobacteriaceae; Bacteria; Escherichia coli","score_opus":0.16669960556001076,"score_gpt":0.36450857219453964,"score_spread":0.19780896663452888,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416518252","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99968445,0.00004224964,0.00005385763,0.000026355996,0.000002670761,0.00001660148,0.000056952143,0.0000021378928,0.00011473248],"genre_scores_gemma":[0.9992453,0.000062980616,0.00022934173,0.000059994483,0.000009037381,0.00001775085,0.0002286926,0.0000015296229,0.00014546627],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995678,0.00012682428,0.000030347595,0.000076673576,0.00007820789,0.00012017975],"domain_scores_gemma":[0.9989968,0.00006909929,0.00029296134,0.00004961207,0.00020791311,0.00038364067],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008316071,0.0004790321,0.0003130689,0.0011943727,0.0012486444,0.0005354831,0.0003715586,0.0006851586,0.00043103757],"category_scores_gemma":[0.0009355097,0.00027938109,0.0002524304,0.00046681357,0.00034527836,0.0005423907,0.00056611275,0.00056950905,0.00011451012],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001424294,0.00023543453,0.98817885,0.000016082078,0.000037184072,0.0018848311,0.0012820133,0.000032465883,0.006645235,0.000020770101,0.0001185032,0.0014061161],"study_design_scores_gemma":[0.0000061643127,0.0005591283,0.9954906,0.000008240232,0.000016926426,0.0014054815,0.0013021898,0.00030266627,0.00051410834,0.000009231324,0.0003783935,0.000006787428],"about_ca_topic_score_codex":0.012904161,"about_ca_topic_score_gemma":0.022229206,"teacher_disagreement_score":0.012904161,"about_ca_system_score_codex":0.0009813448,"about_ca_system_score_gemma":0.000568031,"threshold_uncertainty_score":0.02565813},"labels":[],"label_agreement":null},{"id":"W2417846343","doi":"","title":"[Molecular-biological characteristic of Yersinia enterocolitica circulating in various regions of Russian Federation].","year":2012,"lang":"en","type":"article","venue":"PubMed","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Yersinia enterocolitica; Virulence; Russian federation; Serotype; Biology; Microbiology; Plasmid; Pathogenicity; Gene; Virology; Bacteria; Geography; Genetics","score_opus":0.030136053079931363,"score_gpt":0.2677357365320051,"score_spread":0.23759968345207375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417846343","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99326646,0.0013352851,0.0005404471,0.00013776965,0.00004360141,0.000048724083,0.0030092162,0.000019710655,0.0015987534],"genre_scores_gemma":[0.98931444,0.000750094,0.0012232309,0.000059775677,0.00003557926,0.000035706355,0.007531756,0.0000037199493,0.0010457152],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998617,0.00002635127,0.000015149185,0.00003637075,0.00001978617,0.00004062],"domain_scores_gemma":[0.99981004,0.000015542222,0.00010591332,0.000010135764,0.000035066452,0.000023267956],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002307858,0.00035459234,0.00018087542,0.00047412494,0.00028919533,0.00021317111,0.000122062454,0.00021619769,0.0014902976],"category_scores_gemma":[0.00034007774,0.00009959658,0.00017140231,0.00036699674,0.00014617013,0.00014376715,0.0001591037,0.00013079561,0.00023619233],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045328675,0.00008374867,0.9174708,0.0003672855,0.00009193835,0.0008304002,0.00051895087,0.0002662794,0.060712837,0.00026124791,0.0023739361,0.016569275],"study_design_scores_gemma":[0.0000051084353,0.00012308088,0.9948138,0.000022047581,0.000021322816,0.0010172202,0.00017576032,0.00011134267,0.0011014744,0.000033492084,0.0025725944,0.0000027140711],"about_ca_topic_score_codex":0.00514094,"about_ca_topic_score_gemma":0.0033625832,"teacher_disagreement_score":0.00514094,"about_ca_system_score_codex":0.00017751733,"about_ca_system_score_gemma":0.0002386086,"threshold_uncertainty_score":0.010222018},"labels":[],"label_agreement":null},{"id":"W2499727158","doi":"10.1016/j.cmi.2016.07.027","title":"Tools for opening new chapters in the book of Treponema pallidum evolutionary history","year":2016,"lang":"en","type":"review","venue":"Clinical Microbiology and Infection","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; McGill University; Max-Planck-Gesellschaft; Deutscher Akademischer Austauschdienst; National Science Foundation","keywords":"Treponema; Biology; Syphilis; Evolutionary biology; Genome; Genetics; Virology; Gene","score_opus":0.12178922141060967,"score_gpt":0.40706128538482794,"score_spread":0.2852720639742183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2499727158","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012851809,0.9659588,0.001324799,0.005182239,0.010500827,0.000015410533,0.000090571535,0.00008202559,0.016716903],"genre_scores_gemma":[0.0015306005,0.9122693,0.002889191,0.00615536,0.013247993,0.000047104375,0.00031396854,0.00009764974,0.06344892],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99962974,0.000058176123,0.000037217524,0.000054387598,0.00018731029,0.000033215474],"domain_scores_gemma":[0.99936587,0.00030453433,0.00006600001,0.00003279418,0.00012093628,0.00010995371],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005379884,0.0009267401,0.0010143506,0.0026826616,0.00046940276,0.002312974,0.0009764959,0.0014386633,0.04468315],"category_scores_gemma":[0.0022389328,0.00033326258,0.0005933588,0.0034847672,0.0011543356,0.0037967272,0.0019811096,0.0033434248,0.018803656],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044673092,0.000044101842,0.00010569417,0.0038649822,0.000022163726,0.0001453471,0.00020324298,0.0001482654,0.0018588547,0.014531758,0.37318245,0.60584843],"study_design_scores_gemma":[0.0000032484509,0.00000735231,0.00009666048,0.000501516,0.0000048477355,0.00020926884,0.000023246104,0.000012408569,0.00006147583,0.0025032721,0.9965724,0.000004172681],"about_ca_topic_score_codex":0.0006075279,"about_ca_topic_score_gemma":0.0023081144,"teacher_disagreement_score":0.04468315,"about_ca_system_score_codex":0.0006643004,"about_ca_system_score_gemma":0.0010517411,"threshold_uncertainty_score":0.14948004},"labels":[],"label_agreement":null},{"id":"W2507632199","doi":"10.1007/s11274-016-2123-3","title":"Aurintricarboxylic acid structure modifications lead to reduction of inhibitory properties against virulence factor YopH and higher cytotoxicity","year":2016,"lang":"en","type":"article","venue":"World Journal of Microbiology and Biotechnology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Western Canada Research Grid","keywords":"Aurintricarboxylic acid; Biology; Biochemistry; Protein tyrosine phosphatase; Cytotoxicity; Active site; Enzyme; In vitro; Apoptosis; Programmed cell death","score_opus":0.013562347190546489,"score_gpt":0.23729128713524708,"score_spread":0.22372893994470058,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2507632199","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942141,0.0018612405,0.0010456326,0.00006366646,0.000017553235,0.000013433951,0.00020510904,0.0000711672,0.0025080554],"genre_scores_gemma":[0.9968831,0.0009130302,0.0009583579,0.00002771279,0.0000031293894,0.000011613151,0.00027473626,0.00001645413,0.0009119285],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99996376,0.000003930882,0.0000020025122,0.0000090528,0.000008492098,0.000012738668],"domain_scores_gemma":[0.9999645,0.0000069316548,0.000013491332,0.000003095723,0.000005592228,0.0000063856724],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000040575884,0.00032766862,0.00024821755,0.000097615106,0.00009703488,0.00020748784,0.00024058415,0.0001969988,0.002189574],"category_scores_gemma":[0.00012914275,0.00010570882,0.00030232128,0.00008267372,0.00011681593,0.00020577811,0.0001562877,0.00036804384,0.0002883031],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00083780504,0.00018847406,0.0009404082,0.00042246736,0.000053190302,0.00030610422,0.000029230641,0.017445147,0.97019076,0.00066634995,0.00042158048,0.008498494],"study_design_scores_gemma":[0.00016831758,0.0029594162,0.006876263,0.000041459345,0.00016681399,0.00045487806,0.00009260923,0.03303979,0.94665295,0.0004715813,0.009032409,0.000043474258],"about_ca_topic_score_codex":0.0009793544,"about_ca_topic_score_gemma":0.0009836522,"teacher_disagreement_score":0.002189574,"about_ca_system_score_codex":0.00016921718,"about_ca_system_score_gemma":0.00012805848,"threshold_uncertainty_score":0.0073248744},"labels":[],"label_agreement":null},{"id":"W2512915703","doi":"10.1101/073445","title":"Improved assemblies and comparison of two ancient <i>Yersinia pestis</i> genomes","year":2016,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Yersinia pestis; Genome; Ancient DNA; Contig; Plague (disease); Biology; Comparative genomics; Evolutionary biology; Genomics; Whole genome sequencing; Genetics; Computational biology; Geography; Gene; Archaeology; Virulence","score_opus":0.016223555460914772,"score_gpt":0.27692081627426807,"score_spread":0.2606972608133533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2512915703","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9743524,0.00060645083,0.019668832,0.00008602245,0.00005775368,0.000040121064,0.0029824562,0.0012248156,0.0009812018],"genre_scores_gemma":[0.84754723,0.00034654464,0.12297602,0.00006614333,0.000033950753,0.00008654446,0.02680847,0.0006552488,0.0014798606],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991849,0.0001627579,0.000075557116,0.00029533857,0.00018641111,0.000095080635],"domain_scores_gemma":[0.9989573,0.00025064728,0.00019778615,0.00019500742,0.00031517312,0.00008402472],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011287476,0.000731104,0.0006513678,0.00110833,0.0006318845,0.0010447557,0.0005016862,0.00068613415,0.0013351471],"category_scores_gemma":[0.0026822304,0.00033076454,0.0007851959,0.0013502159,0.00025583783,0.00051705335,0.0007830894,0.0006198718,0.00068879646],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009875945,0.00015032134,0.011698958,0.00041253914,0.000214684,0.0006789281,0.000914172,0.011337993,0.92486745,0.00043535,0.0012551934,0.047046684],"study_design_scores_gemma":[0.00015451375,0.00084745587,0.27040687,0.00011883393,0.00048178187,0.0012916578,0.0008513393,0.10033214,0.591765,0.0006733495,0.03290949,0.00016753028],"about_ca_topic_score_codex":0.0023778046,"about_ca_topic_score_gemma":0.0030428912,"teacher_disagreement_score":0.0023778046,"about_ca_system_score_codex":0.0004928772,"about_ca_system_score_gemma":0.00031701155,"threshold_uncertainty_score":0.005969465},"labels":[],"label_agreement":null},{"id":"W2513036250","doi":"10.1016/s1473-3099(16)30119-0","title":"Plagued by doubt and viral misinformation: the need for evidence-based use of historical disease images","year":2016,"lang":"en","type":"review","venue":"The Lancet Infectious Diseases","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Misinformation; Misrepresentation; Context (archaeology); Narrative; Infectious disease (medical specialty); History; Disease; Internet privacy; Medicine; Political science; Literature; Computer science; Law; Art; Pathology","score_opus":0.06788762776922484,"score_gpt":0.3408615280310605,"score_spread":0.27297390026183566,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2513036250","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000055652457,0.98687994,0.00016467307,0.010462818,0.0010549852,0.0000058353344,0.000018688996,0.000005684546,0.0013516102],"genre_scores_gemma":[0.0016222295,0.99035066,0.0007208382,0.0053508845,0.0015032316,0.00001207418,0.000027125356,0.000006102871,0.00040679035],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9963264,0.001800263,0.00054145616,0.00021050828,0.0010202555,0.000101062236],"domain_scores_gemma":[0.9659954,0.027658893,0.0020409564,0.0006932577,0.0029210798,0.0006905461],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.011762413,0.00087565376,0.0030512055,0.0057851532,0.0008483802,0.006815806,0.0025801542,0.0062019913,0.006877313],"category_scores_gemma":[0.028383741,0.00052660226,0.000894072,0.0035123494,0.005941968,0.009691355,0.0023979682,0.008168803,0.0016548313],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000082900166,0.000049111382,0.0003031599,0.024114585,0.00025556146,0.0002675489,0.0009340052,0.00023409227,0.0002259796,0.03884339,0.104444094,0.8302456],"study_design_scores_gemma":[0.000034166485,0.000033127544,0.00064203015,0.034034453,0.00013808964,0.0008208907,0.0007761401,0.00008513252,0.0001025749,0.020267095,0.9430253,0.000040948282],"about_ca_topic_score_codex":0.0037675106,"about_ca_topic_score_gemma":0.0076717273,"teacher_disagreement_score":0.011762413,"about_ca_system_score_codex":0.0033824358,"about_ca_system_score_gemma":0.006776372,"threshold_uncertainty_score":0.062206328},"labels":[],"label_agreement":null},{"id":"W2530432517","doi":"","title":"and his Contribution to Early American Science","year":2016,"lang":"en","type":"article","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Quarter (Canadian coin); History; Natural history; South carolina; Art history; Classics; Archaeology; Ecology; Biology; Political science","score_opus":0.006497887010056193,"score_gpt":0.2855946966186118,"score_spread":0.2790968096085556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2530432517","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.003102798,0.120409414,0.0023920587,0.2039456,0.14776164,0.000046302728,0.00024756626,0.00015838756,0.52193636],"genre_scores_gemma":[0.06543322,0.056069743,0.0023261637,0.042512886,0.059054457,0.00004059839,0.00010605313,0.00011221618,0.7743446],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980671,0.0006563895,0.000083462815,0.00032010252,0.0006379254,0.00023502816],"domain_scores_gemma":[0.9968208,0.00057732966,0.00013110535,0.00023292573,0.0012475223,0.0009904122],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0025944677,0.0006751058,0.00043219927,0.0018504999,0.0053608217,0.005653265,0.00058684143,0.0021407707,0.034666847],"category_scores_gemma":[0.0042435313,0.00026572996,0.0002994544,0.0010038523,0.0049640397,0.003475901,0.0030512824,0.0056431475,0.008879967],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004960854,0.00004592247,0.0010081779,0.00017971246,0.000017890236,0.00014159652,0.0029475908,0.00007593513,0.0003666071,0.14148061,0.7455155,0.10817075],"study_design_scores_gemma":[0.0000010135726,0.0000039154656,0.00019793966,0.000045795226,0.0000017121674,0.000049422564,0.0001234321,0.000010547476,0.000027221648,0.0039542876,0.9955824,0.000002385498],"about_ca_topic_score_codex":0.006493309,"about_ca_topic_score_gemma":0.014590001,"teacher_disagreement_score":0.96533316,"about_ca_system_score_codex":0.0050343648,"about_ca_system_score_gemma":0.0062916577,"threshold_uncertainty_score":0.1159721},"labels":[],"label_agreement":null},{"id":"W2535923986","doi":"10.1098/rspb.2016.1762","title":"Global population divergence and admixture of the brown rat ( <i>Rattus norvegicus</i> )","year":2016,"lang":"en","type":"article","venue":"Proceedings of the Royal Society B Biological Sciences","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":149,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture; Government of British Columbia","funders":"National Center for Advancing Translational Sciences; Division of Environmental Biology; Fogarty International Center; Division of Biological Infrastructure; National Institute of Allergy and Infectious Diseases","keywords":"Colonization; Archipelago; Phylogeography; Population; Geography; Biology; Range (aeronautics); Ecology; Demography; Phylogenetic tree; Gene","score_opus":0.014579980612809382,"score_gpt":0.25798295296287943,"score_spread":0.24340297235007005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2535923986","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9997023,0.000037300742,0.00010117805,0.0000044374183,6.898914e-7,5.394732e-7,0.000024608222,0.000002166357,0.00012681063],"genre_scores_gemma":[0.9994943,0.000052039093,0.000226181,0.000005235781,0.0000016040178,0.0000017690952,0.00015180353,0.0000022387871,0.000064892105],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99980384,0.00005851056,0.00001032559,0.00008218264,0.000017778022,0.000027387305],"domain_scores_gemma":[0.9997925,0.00004987854,0.00006446488,0.000030530817,0.000029562541,0.000033020184],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005515779,0.0001860708,0.00022744767,0.00085646444,0.0001687343,0.0003542958,0.00016649427,0.00016793593,0.00042281955],"category_scores_gemma":[0.0004203097,0.00012991186,0.00024807866,0.00047936395,0.00032336064,0.00020315484,0.00027414554,0.000277368,0.00007292968],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005244482,0.000050137154,0.87953866,0.000047773683,0.00065687974,0.00020644364,0.0009286598,0.0017150366,0.09535667,0.00050979207,0.000106574276,0.020359004],"study_design_scores_gemma":[0.0000067086025,0.00008527779,0.9978042,0.000004024614,0.000060204988,0.00012841733,0.00012588332,0.00093151,0.00054671057,0.00007310561,0.00022729511,0.000006635119],"about_ca_topic_score_codex":0.003069214,"about_ca_topic_score_gemma":0.005323947,"teacher_disagreement_score":0.003069214,"about_ca_system_score_codex":0.00024074524,"about_ca_system_score_gemma":0.00011431734,"threshold_uncertainty_score":0.0061027408},"labels":[],"label_agreement":null},{"id":"W2539223413","doi":"10.5751/es-08873-210412","title":"Avian Cholera emergence in Arctic-nesting northern Common Eiders: using community-based, participatory surveillance to delineate disease outbreak patterns and predict transmission risk","year":2016,"lang":"en","type":"article","venue":"Ecology and Society","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Makivik Corporation; Environment and Climate Change Canada; Carleton University; Simon Fraser University","funders":"","keywords":"Outbreak; Geography; Transmission (telecommunications); Arctic; Fishery; Disease surveillance; Ecology; Nesting (process); Disease; Biology; Virology; Computer science","score_opus":0.030254261947379124,"score_gpt":0.30514385319968734,"score_spread":0.2748895912523082,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2539223413","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985605,0.000099686375,0.00051201665,0.00003422431,0.000003415048,0.00008509171,0.00011114521,0.0000065862187,0.0005872862],"genre_scores_gemma":[0.99685955,0.0001367158,0.0024370267,0.000022017623,0.0000050228855,0.000108059256,0.00022697946,0.0000013248208,0.00020337694],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99908185,0.0004690756,0.000052708387,0.00015887227,0.00011719121,0.00012021312],"domain_scores_gemma":[0.99824226,0.00040803326,0.00066856307,0.00008955944,0.0003053566,0.0002862676],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002807833,0.00041941635,0.00028518087,0.0010533489,0.00050060137,0.00060388807,0.00042417133,0.0004197595,0.00035878125],"category_scores_gemma":[0.003301145,0.00030190137,0.00029943415,0.00042461455,0.00034884713,0.0005056905,0.0009604874,0.00030715304,0.00011737824],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018864828,0.0001953889,0.9770626,0.000044048596,0.000061952174,0.00008086555,0.002882399,0.00036330998,0.0017091767,0.000031075342,0.00018249977,0.017197972],"study_design_scores_gemma":[0.000021062928,0.00076798326,0.9884721,0.0000740135,0.00004047545,0.00011196924,0.0052000587,0.004058167,0.0006303786,0.00013758196,0.0004693354,0.000016938135],"about_ca_topic_score_codex":0.022592578,"about_ca_topic_score_gemma":0.0744713,"teacher_disagreement_score":0.022592578,"about_ca_system_score_codex":0.0006142348,"about_ca_system_score_gemma":0.00072092627,"threshold_uncertainty_score":0.044922113},"labels":[],"label_agreement":null},{"id":"W2551987752","doi":"10.1101/081265","title":"Identification of new bacterial type III secreted effectors with a recursive Hidden Markov Model profile-alignment strategy","year":2016,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Effector; Signal peptide; Computational biology; Biology; Hidden Markov model; SIGNAL (programming language); Secretion; Computer science; Genetics; Artificial intelligence; Peptide sequence; Cell biology; Gene; Programming language; Biochemistry","score_opus":0.012354825988061115,"score_gpt":0.24778210016553584,"score_spread":0.23542727417747472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2551987752","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19791092,0.00039525478,0.7981721,0.0001173558,0.00002409812,0.00016877314,0.00037304327,0.0021010088,0.00073737965],"genre_scores_gemma":[0.46040788,0.00023063301,0.5364556,0.000087649685,0.0000137817315,0.00013398442,0.0016406944,0.00020605272,0.00082372647],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99962413,0.00011074815,0.00003232732,0.000116546,0.00007825334,0.000037995615],"domain_scores_gemma":[0.99975723,0.000086504515,0.000054309883,0.000021989055,0.000050671504,0.000029233179],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005917958,0.00076220237,0.0007698085,0.00082029385,0.00033194062,0.00058577297,0.00054181484,0.0006394464,0.0008998758],"category_scores_gemma":[0.0009688372,0.00038698185,0.0011099001,0.00054149237,0.00018593426,0.0006210122,0.0004963162,0.00075325556,0.0007606003],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010232944,0.00065817806,0.012449278,0.0005653519,0.00033721572,0.001052245,0.00016872423,0.085343696,0.70276004,0.0058969143,0.0017832383,0.18796176],"study_design_scores_gemma":[0.00003718696,0.00024941718,0.0020932215,0.000014975295,0.00009532844,0.00032885786,0.000034439945,0.9392709,0.05463881,0.0018008217,0.001404828,0.000031152194],"about_ca_topic_score_codex":0.00073278643,"about_ca_topic_score_gemma":0.0011064876,"teacher_disagreement_score":0.0008998758,"about_ca_system_score_codex":0.0003100123,"about_ca_system_score_gemma":0.0006663196,"threshold_uncertainty_score":0.0031297803},"labels":[],"label_agreement":null},{"id":"W2563240128","doi":"10.3138/cbmh.19.2.529","title":"Biology of Plagues: Evidence from Historical Populations Susan Scott and Christopher J. Duncan","year":2002,"lang":"en","type":"article","venue":"Canadian Journal of Health History","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Environmental ethics; Biology; Gerontology; Classics; History; Philosophy; Medicine","score_opus":0.10751686371528328,"score_gpt":0.3080627968658711,"score_spread":0.20054593315058783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2563240128","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92017287,0.026051907,0.001236568,0.015959712,0.00022543102,0.000037509973,0.00080954965,0.000010616094,0.035495784],"genre_scores_gemma":[0.959347,0.031211406,0.00087037234,0.0026658806,0.00030490712,0.000014522173,0.00034781412,0.000009997585,0.00522808],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99935395,0.00016509526,0.000029615027,0.00011871683,0.0002294174,0.00010310973],"domain_scores_gemma":[0.9959611,0.0010502985,0.0007722301,0.0002635265,0.0015391998,0.00041366124],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019622385,0.00022465036,0.00025410674,0.0020641014,0.0022582652,0.0013689336,0.0007922688,0.00089320604,0.0029931562],"category_scores_gemma":[0.005441125,0.00023508024,0.00012014839,0.0023398674,0.0042961575,0.0010507021,0.001346842,0.0011052586,0.00034741138],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045881438,0.00010554793,0.7894727,0.00026267383,0.00010715497,0.0015590861,0.04193709,0.00029854054,0.0073775426,0.01032778,0.011493619,0.13659954],"study_design_scores_gemma":[0.000016788616,0.00013248496,0.9336795,0.00029827064,0.000047665304,0.0016302817,0.015294965,0.000065194254,0.0011712203,0.0034686641,0.04413904,0.000055812015],"about_ca_topic_score_codex":0.15812881,"about_ca_topic_score_gemma":0.27796492,"teacher_disagreement_score":0.8418712,"about_ca_system_score_codex":0.0011881816,"about_ca_system_score_gemma":0.0010963707,"threshold_uncertainty_score":0.31441677},"labels":[],"label_agreement":null},{"id":"W2564900711","doi":"10.4324/9781315639314-18","title":"Plague and the city: methodological considerations in mapping disease in early modern Florence","year":2016,"lang":"en","type":"book-chapter","venue":"BIROn (Birkbeck, University of London)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Plague (disease); Data science; Digital mapping; Geography; Cartography; Sociology; Computer science; Archaeology","score_opus":0.061116872315048476,"score_gpt":0.2643449576155947,"score_spread":0.2032280853005462,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2564900711","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07392368,0.21290952,0.04677137,0.081451096,0.0110264495,0.00045278267,0.0013943763,0.00028708315,0.5717837],"genre_scores_gemma":[0.45255888,0.08337642,0.040500913,0.008143246,0.004180283,0.0007893183,0.0011916668,0.00023461418,0.40902454],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9993605,0.00041911766,0.000025696994,0.000063189924,0.00010100292,0.000030401576],"domain_scores_gemma":[0.9981554,0.0015579668,0.00006197734,0.000043981472,0.00013566278,0.000044995188],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002116504,0.000366301,0.00036056648,0.0026382152,0.0016936709,0.004690015,0.0010048127,0.00074601796,0.00630815],"category_scores_gemma":[0.0028777064,0.0001701569,0.00020721067,0.0038569206,0.0035525076,0.00261469,0.0011415058,0.0008109578,0.00049890974],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060476665,0.00003424399,0.007988967,0.0015395803,0.00003640456,0.0009234536,0.045711175,0.0017072402,0.00056038157,0.50406796,0.17514431,0.26222587],"study_design_scores_gemma":[0.0000040718674,0.000023590503,0.010390652,0.0006148492,0.000013018945,0.0005130004,0.021684494,0.00047634225,0.00022948683,0.030729782,0.93530154,0.000019085324],"about_ca_topic_score_codex":0.018167313,"about_ca_topic_score_gemma":0.079867035,"teacher_disagreement_score":0.018167313,"about_ca_system_score_codex":0.0039961557,"about_ca_system_score_gemma":0.0011260562,"threshold_uncertainty_score":0.036123157},"labels":[],"label_agreement":null},{"id":"W2567322631","doi":"10.1111/mmi.13610","title":"Several Hfq‐dependent alterations in physiology of <i>Yersinia enterocolitica</i> O:3 are mediated by derepression of the transcriptional regulator RovM","year":2016,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Biocenter Finland; Academy of Finland; Emil Aaltosen Säätiö; Helsingin Yliopisto; Queen's University Belfast; Queen's University","keywords":"Biology; Derepression; Virulence; rpoS; Cell biology; Regulator; Regulation of gene expression; Chaperone (clinical); Transcriptional regulation; Genetics; Gene; Gene expression; Promoter; Psychological repression","score_opus":0.004907383150884183,"score_gpt":0.22578281212530057,"score_spread":0.2208754289744164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2567322631","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956475,0.00068133615,0.0025043776,0.00009161649,0.000014460515,0.00001635417,0.00056599954,0.00007535175,0.00040292848],"genre_scores_gemma":[0.9963503,0.00037076062,0.0014366775,0.000056535293,0.0000060641337,0.00002363663,0.000862875,0.00003072639,0.00086245505],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999863,0.000022672935,0.00001412084,0.0000344588,0.000031543077,0.000034183697],"domain_scores_gemma":[0.9998963,0.000013930661,0.000044086337,0.000014545342,0.000012711305,0.000018337618],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013281657,0.00055910205,0.00024138142,0.00013008341,0.00009608125,0.00022817358,0.00014217797,0.00027939255,0.0005949056],"category_scores_gemma":[0.00010269188,0.00009617116,0.00034107696,0.00010043079,0.000261612,0.00017845174,0.00020959091,0.0004160173,0.00019541125],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029824458,0.0000047724725,0.0001247402,0.000009904763,0.0000016062695,0.00002114375,0.000004341778,0.000008058378,0.9995877,0.000009417972,0.000005324748,0.00019320048],"study_design_scores_gemma":[0.000003891259,0.00014303066,0.013726544,0.0000028931945,0.000008138282,0.00018458493,0.000032434815,0.00017218765,0.98523456,0.000023868379,0.00046369765,0.000004359949],"about_ca_topic_score_codex":0.0005676605,"about_ca_topic_score_gemma":0.0005029337,"teacher_disagreement_score":0.0005949056,"about_ca_system_score_codex":0.00021612842,"about_ca_system_score_gemma":0.00013852342,"threshold_uncertainty_score":0.001990199},"labels":[],"label_agreement":null},{"id":"W2574055622","doi":"","title":"INFECTIOUS DISEASE AS AN INDICATOR OF PHYSIOLOGICAL STRESS IN THE MIDDLE HOLOCENE CIS-BAIKAL","year":2016,"lang":"en","type":"dissertation","venue":"University Library - University of Saskatchewan (University of Saskatchewan)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Social Sciences and Humanities Research Council of Canada","keywords":"Holocene; Disease; Infectious disease (medical specialty); Geography; History; Geology; Archaeology; Medicine; Pathology","score_opus":0.009938584188059473,"score_gpt":0.20879406822879587,"score_spread":0.19885548404073639,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2574055622","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986368,0.00032818405,0.000029280813,0.000037882935,0.0000048739116,0.000006939723,0.00011905836,0.000001977772,0.0008350353],"genre_scores_gemma":[0.9990815,0.00023735003,0.00009215842,0.000028936338,0.0000033294386,0.0000102562935,0.0001619635,0.0000016459297,0.00038273324],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997924,0.000022804457,0.000017467852,0.000049894425,0.000036428875,0.000080922335],"domain_scores_gemma":[0.99977344,0.000014946276,0.000057642126,0.000007374175,0.000055792847,0.000090755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022931838,0.0003957272,0.0003441197,0.0011766041,0.0013478858,0.0011942328,0.00054867845,0.0005258106,0.0010008839],"category_scores_gemma":[0.00043250283,0.00035729393,0.00018054663,0.001031232,0.0006888742,0.00042722095,0.0013528031,0.00067701354,0.00026031322],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024254802,0.00012551367,0.9645264,0.00007844251,0.000054553293,0.0009661391,0.0133147845,0.00006124299,0.015960617,0.00017784395,0.00019817764,0.0042937715],"study_design_scores_gemma":[0.0000030387534,0.000054422133,0.9935648,0.000014130231,0.000014035679,0.00029188118,0.005248406,0.00003659602,0.00034787427,0.000031617255,0.00038539915,0.000007829111],"about_ca_topic_score_codex":0.18897034,"about_ca_topic_score_gemma":0.35893756,"teacher_disagreement_score":0.18897034,"about_ca_system_score_codex":0.003216744,"about_ca_system_score_gemma":0.0018369027,"threshold_uncertainty_score":0.37574077},"labels":[],"label_agreement":null},{"id":"W2577035964","doi":"10.1017/s0031182016002122","title":"Gregarine infection accelerates larval development of the cat flea<i>Ctenocephalides felis</i>(Bouché)","year":2017,"lang":"en","type":"article","venue":"Parasitology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Canadian Institute for Advanced Research","funders":"","keywords":"Biology; Flea; Ctenocephalides; Felis; Host (biology); Zoology; Coevolution; Ecology; Larva; Parasite hosting","score_opus":0.028204027124922544,"score_gpt":0.346502997009718,"score_spread":0.31829896988479545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2577035964","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993104,0.00022917737,0.000048202568,0.00002281595,0.0000031776096,0.0000053151493,0.00007282579,0.000008432697,0.00029964658],"genre_scores_gemma":[0.9984049,0.00014035856,0.0001442925,0.000042432035,0.0000029459623,0.000011577837,0.00018503335,0.0000034371767,0.0010650138],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999429,0.000011205903,0.000003866085,0.000014411421,0.000009192399,0.00001852907],"domain_scores_gemma":[0.9998733,0.000019466417,0.00004687902,0.000009585539,0.000012656508,0.000038228787],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000083114566,0.00022185234,0.00015539078,0.00020052673,0.00011748965,0.00018219142,0.00008759868,0.00020777115,0.001100134],"category_scores_gemma":[0.0001318989,0.0001269539,0.00016673813,0.000050898372,0.00012179713,0.00013750193,0.00019230285,0.0003343739,0.00017714938],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017682074,0.000050903975,0.0062695006,0.000036950423,0.0000087126145,0.000067571105,0.000040885883,0.000020087182,0.9924064,0.00001677742,0.00005723037,0.0008480615],"study_design_scores_gemma":[0.00001901113,0.0023711403,0.79195684,0.000015421398,0.00003306433,0.00048613033,0.00021817132,0.0005678433,0.20301552,0.000038896935,0.0012670563,0.000010832793],"about_ca_topic_score_codex":0.0012263067,"about_ca_topic_score_gemma":0.0027708944,"teacher_disagreement_score":0.0012263067,"about_ca_system_score_codex":0.00021156298,"about_ca_system_score_gemma":0.00008979435,"threshold_uncertainty_score":0.0036802888},"labels":[],"label_agreement":null},{"id":"W2586893845","doi":"10.1093/pch/17.suppl_a.23ab","title":"The Spatial Manifestation of Sids in Alberta, Canada","year":2012,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Geography; Medicine","score_opus":0.006871718733088388,"score_gpt":0.26414285437109875,"score_spread":0.25727113563801035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2586893845","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97661954,0.0017717547,0.00033564362,0.0011025552,0.000060217026,0.00009426802,0.00785628,0.000053574888,0.012106192],"genre_scores_gemma":[0.99187815,0.0010463399,0.0004268944,0.00016547553,0.000016907969,0.000017488246,0.0016742538,0.000012069968,0.0047623427],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995085,0.000046380454,0.00002229375,0.000044623426,0.00014292439,0.00023524371],"domain_scores_gemma":[0.9987081,0.00007055514,0.00017179394,0.000030679264,0.0006741019,0.00034476822],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003296998,0.00028745722,0.00028915424,0.001984485,0.0029592346,0.001072528,0.0010021309,0.00048604156,0.0037914468],"category_scores_gemma":[0.0011456034,0.0003434144,0.0002997629,0.0039483216,0.0006494379,0.00026937897,0.0010169739,0.00066441117,0.00032570245],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023192367,0.000056337034,0.9737752,0.00008698431,0.00006707661,0.0013936238,0.0019594864,0.0006139633,0.0008827575,0.00075662456,0.005667764,0.014508286],"study_design_scores_gemma":[0.000008859899,0.000026933165,0.9922529,0.00004357844,0.000015739444,0.00037953357,0.0040276344,0.00037136234,0.0000927494,0.00006943522,0.0026962555,0.000015117144],"about_ca_topic_score_codex":0.9963175,"about_ca_topic_score_gemma":0.9989171,"teacher_disagreement_score":0.026353208,"about_ca_system_score_codex":0.026353208,"about_ca_system_score_gemma":0.027623657,"threshold_uncertainty_score":0.19120681},"labels":[],"label_agreement":null},{"id":"W2596822119","doi":"10.1038/s41598-017-00404-4","title":"Fission-fusion dynamics over large distances in raven non-breeders","year":2017,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University; University of British Columbia","funders":"Austrian Science Fund","keywords":"Fusion; Fission; Dynamics (music); Computer science; Evolutionary biology; Biology; Nuclear physics; Physics","score_opus":0.009061700527496322,"score_gpt":0.3016141016818473,"score_spread":0.292552401154351,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2596822119","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996164,0.00007561757,0.0001593718,0.0000058644623,6.6032226e-7,0.0000015870944,0.000048140457,0.0000036347699,0.00008862825],"genre_scores_gemma":[0.99931943,0.000037320937,0.00029386306,0.0000054406264,0.0000017412154,0.000003388474,0.00019667417,0.000002100547,0.00013992754],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99956626,0.0000811897,0.000023959128,0.00021973337,0.00004460737,0.000064244414],"domain_scores_gemma":[0.9988451,0.00024072402,0.0005198657,0.00011835824,0.00011256585,0.00016342192],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064601394,0.00014629815,0.0004678805,0.0011088379,0.00035557264,0.00056062633,0.00029370925,0.0003629852,0.0009358445],"category_scores_gemma":[0.0014509188,0.00022480334,0.00025432534,0.00054168754,0.00039439564,0.0004304547,0.00055102195,0.00029700267,0.00025724768],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028657698,0.00004782117,0.9588241,0.00003615278,0.000110484536,0.0003084987,0.0016730465,0.0006539197,0.029141894,0.00015395666,0.000115858486,0.008647672],"study_design_scores_gemma":[0.0000027170358,0.00007661845,0.99655044,0.0000051206584,0.000014711443,0.00030035354,0.0004471611,0.0016623901,0.0005664334,0.000116833864,0.0002480727,0.00000910968],"about_ca_topic_score_codex":0.0029164585,"about_ca_topic_score_gemma":0.003984453,"teacher_disagreement_score":0.0029164585,"about_ca_system_score_codex":0.00021533835,"about_ca_system_score_gemma":0.000092967566,"threshold_uncertainty_score":0.005798936},"labels":[],"label_agreement":null},{"id":"W2619993600","doi":"","title":"Black-Footed Ferret Restoration; History, Challenges and Current Status","year":2016,"lang":"en","type":"article","venue":"Intermountain journal of sciences","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Cynomys ludovicianus; Prairie dog; Burrow; Biology; National park; Wildlife; Captivity; Predation; Population; Ursus; Ecology; Livestock; Fishery; Geography; Zoology; Demography","score_opus":0.057270448120931045,"score_gpt":0.3301032982677956,"score_spread":0.27283285014686454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2619993600","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13277483,0.51854235,0.0008895365,0.29865083,0.005024786,0.00007812263,0.00083046634,0.00020924733,0.04299989],"genre_scores_gemma":[0.5938114,0.35841113,0.0017566375,0.018598273,0.0063551674,0.00012471265,0.0013324635,0.000048406702,0.019561758],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99951947,0.00008928814,0.00004374637,0.00011848843,0.000091668226,0.00013744806],"domain_scores_gemma":[0.99704283,0.00037086938,0.00052348274,0.00006215168,0.0005937808,0.0014068602],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021589694,0.00027813224,0.0003580224,0.0011686427,0.0016114401,0.0031479597,0.001438982,0.0014681512,0.0074537755],"category_scores_gemma":[0.003814166,0.00012352454,0.00021300714,0.0008590549,0.001787227,0.003311853,0.0011012622,0.0012894315,0.0007952736],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020470851,0.00073502434,0.10008655,0.0016482058,0.00004165439,0.0013841044,0.0026427952,0.00025686045,0.00037104494,0.008276479,0.08436886,0.7999838],"study_design_scores_gemma":[0.00002100683,0.0006400957,0.18537794,0.008246687,0.000112544505,0.007411076,0.023941686,0.0008904086,0.0004558142,0.008033723,0.7647749,0.00009407975],"about_ca_topic_score_codex":0.012594581,"about_ca_topic_score_gemma":0.032760724,"teacher_disagreement_score":0.012594581,"about_ca_system_score_codex":0.002057924,"about_ca_system_score_gemma":0.0047074207,"threshold_uncertainty_score":0.025042534},"labels":[],"label_agreement":null},{"id":"W2626047027","doi":"10.1101/149468","title":"Phylogeographic separation and formation of sexually discrete lineages in a global population of <i>Yersinia pseudotuberculosis</i>","year":2017,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Trent University; European Defence Agency; Nottingham Trent University","keywords":"Yersinia pseudotuberculosis; Biology; Phylogeography; Population; Evolutionary biology; Biological dispersal; Lineage (genetic); Genetics; Yersinia; CRISPR; Comparative genomics; Population genomics; Genome; Genomics; Phylogenetics; Gene; Virulence; Bacteria","score_opus":0.010429007486357654,"score_gpt":0.27704659488434347,"score_spread":0.2666175873979858,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2626047027","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989691,0.000053126176,0.00047568846,0.000016576032,9.669225e-7,0.000002254055,0.00017067906,0.0000057279553,0.00030591455],"genre_scores_gemma":[0.9987633,0.00004647303,0.00046087257,0.000016846381,0.000001706426,0.0000044041653,0.00059671415,0.0000057376924,0.000103945495],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998559,0.00003493927,0.00000698906,0.00006614399,0.00001441495,0.000021579475],"domain_scores_gemma":[0.9996773,0.00010196623,0.000098859884,0.000044953045,0.000043854627,0.00003303282],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038964747,0.00011640672,0.00018434461,0.0007941217,0.00028841913,0.00044440664,0.0001790843,0.000254872,0.0010362314],"category_scores_gemma":[0.0005056537,0.0000935746,0.00020699544,0.0006615575,0.0003491559,0.00020082486,0.00041028627,0.00028839134,0.00016815256],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006277693,0.00008249746,0.76798344,0.0000881112,0.00030532814,0.00034774526,0.0022648552,0.0017238213,0.2015723,0.0010480847,0.00048288392,0.023473097],"study_design_scores_gemma":[0.000013366491,0.0000990356,0.992,0.000017744407,0.000050153823,0.00036456046,0.0007455582,0.0019533013,0.0028437309,0.00029602737,0.0016038368,0.000012706778],"about_ca_topic_score_codex":0.0012785303,"about_ca_topic_score_gemma":0.0017220024,"teacher_disagreement_score":0.0012785303,"about_ca_system_score_codex":0.0001783252,"about_ca_system_score_gemma":0.000098267745,"threshold_uncertainty_score":0.0034665465},"labels":[],"label_agreement":null},{"id":"W2626712563","doi":"","title":"Persistent spatial clusters of prescribed porcine antimicrobials","year":2014,"lang":"en","type":"article","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Prince Edward Island","funders":"","keywords":"Antimicrobial; Medicine; Geography; Biology; Microbiology","score_opus":0.010073250254114827,"score_gpt":0.2518009227249793,"score_spread":0.24172767247086446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2626712563","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931183,0.00082346634,0.0014199986,0.0001150239,0.00001736005,0.000018837543,0.0015318233,0.00004607685,0.0029091847],"genre_scores_gemma":[0.9958125,0.00030810205,0.00095995434,0.00005863946,0.000018769988,0.000020064354,0.0011681222,0.000012942209,0.0016409748],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994717,0.00005740325,0.000036046196,0.00016954482,0.00013684953,0.00012830396],"domain_scores_gemma":[0.99846196,0.0002919301,0.0005287321,0.00021512911,0.00035586776,0.00014645286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022492083,0.00013128643,0.00027401178,0.00078622426,0.00043178216,0.0010104544,0.00027233243,0.0003114114,0.0032039725],"category_scores_gemma":[0.0010459676,0.00016850712,0.00033618673,0.00124991,0.0003305332,0.00035068023,0.00053808687,0.00037977248,0.00053247664],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002475366,0.00020660012,0.56692946,0.0003066604,0.00031205866,0.0007388264,0.0008996683,0.0013544298,0.3781041,0.0012472078,0.0016834664,0.0457421],"study_design_scores_gemma":[0.000022903778,0.00039515967,0.9568778,0.000034265195,0.00010757931,0.0014508388,0.001416897,0.0018702969,0.03142888,0.00047988968,0.005891426,0.00002411331],"about_ca_topic_score_codex":0.0048953374,"about_ca_topic_score_gemma":0.005732412,"teacher_disagreement_score":0.0048953374,"about_ca_system_score_codex":0.00053316663,"about_ca_system_score_gemma":0.0005671432,"threshold_uncertainty_score":0.010718286},"labels":[],"label_agreement":null},{"id":"W2643802561","doi":"10.1016/j.ijfoodmicro.2017.06.019","title":"Development of a novel multiplexed qPCR and Pyrosequencing method for the detection of human pathogenic yersiniae","year":2017,"lang":"en","type":"article","venue":"International Journal of Food Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"Canadian Food Inspection Agency","keywords":"Yersinia enterocolitica; Biology; Pyrosequencing; GenBank; Pathogenic bacteria; Yersinia pseudotuberculosis; Microbiology; Yersinia; Yersinia pestis; Bacteria; Virulence; Gene; Genetics","score_opus":0.043362397989111415,"score_gpt":0.3569915271571446,"score_spread":0.3136291291680332,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2643802561","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2223108,0.0029365923,0.7639508,0.00054191565,0.00081897166,0.0010186185,0.0030060275,0.0022791927,0.0031369731],"genre_scores_gemma":[0.2770933,0.001547938,0.7061062,0.0006677297,0.0001691326,0.0017213726,0.003213455,0.00017978268,0.009301172],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99574137,0.0005379236,0.00022899109,0.0014689354,0.0017341881,0.00028856503],"domain_scores_gemma":[0.9989385,0.00031205112,0.00014679872,0.000115733754,0.0003898218,0.00009701859],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002890928,0.0015250513,0.0018482114,0.0012573375,0.00056914793,0.0011664479,0.0014550006,0.0021332877,0.000995285],"category_scores_gemma":[0.0020935715,0.0015714719,0.0012479174,0.0006881675,0.0007140035,0.0010887993,0.0014187841,0.0020183588,0.00095376757],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012762929,0.00012681603,0.00100612,0.00015305818,0.00004359438,0.000046875815,0.000053777843,0.000672671,0.9832208,0.00031183398,0.00021777472,0.014019007],"study_design_scores_gemma":[0.000043892156,0.0005980578,0.0035597926,0.000045164124,0.00011969384,0.0004109251,0.000051482526,0.028541705,0.95731896,0.0004608832,0.008733154,0.000116289826],"about_ca_topic_score_codex":0.00078343804,"about_ca_topic_score_gemma":0.0024436146,"teacher_disagreement_score":0.002890928,"about_ca_system_score_codex":0.00061897497,"about_ca_system_score_gemma":0.001638073,"threshold_uncertainty_score":0.015288889},"labels":[],"label_agreement":null},{"id":"W264570711","doi":"","title":"Histopathological changes in the central nervous system of moose (Alces alces) in the Ivanovo region of Russia.","year":2002,"lang":"en","type":"article","venue":"Alces","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Central nervous system; Biology; Encephalitis; Zoology; Ecology; Virus; Neuroscience; Immunology","score_opus":0.029984790284078293,"score_gpt":0.2583104569504867,"score_spread":0.2283256666664084,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W264570711","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992093,0.000217389,0.000093683404,0.000005083678,0.0000024092503,0.000006232253,0.00006743214,0.000003984467,0.00039447148],"genre_scores_gemma":[0.99830544,0.0002557246,0.00020275351,0.000013034834,0.0000017787467,0.0000069566404,0.00020417407,0.0000016357212,0.0010084294],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99995315,0.000006297954,0.0000042146066,0.000015727364,0.000007693973,0.000012850202],"domain_scores_gemma":[0.9999242,0.0000043209056,0.000031199266,0.000005132988,0.000015099935,0.00001997248],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007706618,0.00017770531,0.000107506705,0.00055197463,0.00024885262,0.00020248533,0.00008692533,0.00014058249,0.00050090416],"category_scores_gemma":[0.00007405399,0.00010701831,0.0001076182,0.00012237455,0.00024508656,0.000112467336,0.00019661935,0.00014086066,0.0001079436],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010258247,0.00012092098,0.34149197,0.00017700532,0.00018062213,0.0062499912,0.001332329,0.0002590969,0.6377646,0.00018031888,0.00017872769,0.011038603],"study_design_scores_gemma":[0.000012453903,0.0004347372,0.9801287,0.000011549501,0.000055215416,0.004550249,0.0006547761,0.00015905763,0.012862546,0.000058096175,0.0010657564,0.0000068477293],"about_ca_topic_score_codex":0.0037071158,"about_ca_topic_score_gemma":0.0072038174,"teacher_disagreement_score":0.0037071158,"about_ca_system_score_codex":0.00015769528,"about_ca_system_score_gemma":0.00012720037,"threshold_uncertainty_score":0.007371068},"labels":[],"label_agreement":null},{"id":"W2736246141","doi":"10.1099/mgen.0.000123","title":"Comparative scaffolding and gap filling of ancient bacterial genomes applied to two ancient Yersinia pestis genomes","year":2017,"lang":"en","type":"article","venue":"Microbial Genomics","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Yersinia pestis; Genome; Ancient DNA; Comparative genomics; Contig; Biology; Evolutionary biology; Synteny; Genomics; Rolling circle replication; Plague (disease); Genetics; Geography; Gene; Archaeology; Virulence","score_opus":0.03235628995941073,"score_gpt":0.30247863713326145,"score_spread":0.27012234717385075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2736246141","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9258009,0.00037883292,0.07178795,0.00006446953,0.000017462413,0.000038215225,0.0005113664,0.000760024,0.00064080197],"genre_scores_gemma":[0.7107821,0.0002578996,0.28542203,0.000037080972,0.0000122370475,0.00009489677,0.0024512496,0.00041970526,0.00052281405],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992194,0.00021762602,0.00006812446,0.00025141265,0.00015789806,0.000085455526],"domain_scores_gemma":[0.99892175,0.00049658323,0.00014411203,0.00018235928,0.00019577266,0.000059438735],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001445956,0.0006181912,0.00058329204,0.0011429176,0.00059878174,0.00078904,0.00046795968,0.0005846329,0.00072530704],"category_scores_gemma":[0.0038469234,0.00031892981,0.0008061708,0.0013459508,0.0004457002,0.00040603764,0.0008211171,0.0006886881,0.0002541874],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001235463,0.0001308461,0.010538832,0.0005509647,0.00013350433,0.00053280534,0.0020568254,0.053020168,0.8210991,0.0016928902,0.0003520169,0.10865653],"study_design_scores_gemma":[0.00006848729,0.0007206491,0.07186791,0.00008439745,0.00021496098,0.0006416016,0.00091109966,0.43214235,0.48281732,0.0015573214,0.008857865,0.00011597713],"about_ca_topic_score_codex":0.0027555593,"about_ca_topic_score_gemma":0.0030928468,"teacher_disagreement_score":0.0027555593,"about_ca_system_score_codex":0.00044709523,"about_ca_system_score_gemma":0.00040369894,"threshold_uncertainty_score":0.007646978},"labels":[],"label_agreement":null},{"id":"W2738892835","doi":"10.1080/03036758.2017.1343193","title":"Potential public health benefits from eradicating rats in New Zealand cities and a tentative research agenda","year":2017,"lang":"en","type":"article","venue":"Journal of the Royal Society of New Zealand","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ministry of Agriculture - Saskatchewan","keywords":"Public health; Government (linguistics); Environmental planning; Environmental health; Geography; Medicine; Pathology","score_opus":0.07408164249753788,"score_gpt":0.36231838413105816,"score_spread":0.2882367416335203,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2738892835","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10350408,0.2970767,0.0047160913,0.5573611,0.003122004,0.00054865686,0.0038068576,0.00012651739,0.029738016],"genre_scores_gemma":[0.58533084,0.36371046,0.010772756,0.027909808,0.0025033331,0.0007018247,0.001666194,0.000015876327,0.007388951],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9976821,0.0010122326,0.00016182891,0.00023122852,0.00048149575,0.0004311069],"domain_scores_gemma":[0.9882923,0.005241372,0.0026587932,0.00025489932,0.0024681657,0.0010844829],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0072339308,0.0010462297,0.0013141674,0.0018480116,0.0008085989,0.0044348114,0.0018481576,0.0045013167,0.01840801],"category_scores_gemma":[0.010665041,0.00032686396,0.0012522218,0.0017520755,0.002906966,0.0043032723,0.002975006,0.0025188867,0.0008401025],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030667668,0.0011268327,0.0716447,0.035657357,0.001621049,0.0032674,0.003365319,0.011628013,0.0096219955,0.069293454,0.06914491,0.7205622],"study_design_scores_gemma":[0.0007289721,0.008386276,0.37741226,0.046263058,0.0028624516,0.001434383,0.052008666,0.00928175,0.0041637905,0.14881088,0.3478013,0.0008462133],"about_ca_topic_score_codex":0.057134725,"about_ca_topic_score_gemma":0.056706894,"teacher_disagreement_score":0.057134725,"about_ca_system_score_codex":0.004769483,"about_ca_system_score_gemma":0.017844176,"threshold_uncertainty_score":0.11360431},"labels":[],"label_agreement":null},{"id":"W2743615025","doi":"","title":"Enterocolitis por Yersinia enterocolítica. Presentación de una paciente","year":2008,"lang":"es","type":"article","venue":"Acta Médica del Centro","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Yersinia enterocolitica; Enterocolitis; Bloody diarrhea; Yersinia; Diarrhea; Transmission (telecommunications); Medicine; Yersiniosis; Microbiology; Abdominal pain; Necrotizing enterocolitis; Feces; Enterobacteriaceae; Biology; Internal medicine; Bacteria","score_opus":0.01378427183394144,"score_gpt":0.28938646488128633,"score_spread":0.2756021930473449,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2743615025","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8767295,0.028796641,0.003313668,0.01111832,0.0023159322,0.0004943891,0.0018377054,0.0008201943,0.07457367],"genre_scores_gemma":[0.97732973,0.008431659,0.0010274908,0.003482912,0.0017034651,0.000065171895,0.00049403997,0.000055932982,0.007409504],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9991154,0.00011538546,0.000088894165,0.00027496653,0.000094747455,0.00031056983],"domain_scores_gemma":[0.9986827,0.000430464,0.00026553244,0.000109263696,0.000102819904,0.00040929602],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00069853285,0.003935131,0.0021323408,0.0025010458,0.0040532597,0.0011796165,0.000841511,0.0052258316,0.007700284],"category_scores_gemma":[0.0025610267,0.0020344579,0.0012334542,0.0028340535,0.002422409,0.004513605,0.0017464486,0.0063553657,0.0024880273],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002270457,0.00026292415,0.015723143,0.00013443138,0.000036147052,0.9780084,0.00056439283,0.00012512541,0.00093969895,0.00031710378,0.0012079946,0.0024535966],"study_design_scores_gemma":[0.00005763722,0.0004552929,0.023205074,0.00010713209,0.000056848607,0.9725425,0.00028788502,0.00026764293,0.0002682163,0.0002451151,0.0024558716,0.00005087301],"about_ca_topic_score_codex":0.0038559185,"about_ca_topic_score_gemma":0.00505643,"teacher_disagreement_score":0.007700284,"about_ca_system_score_codex":0.0012878948,"about_ca_system_score_gemma":0.0008827708,"threshold_uncertainty_score":0.025760055},"labels":[],"label_agreement":null},{"id":"W2753835675","doi":"10.1128/jcm.00911-17","title":"Multisite Evaluation of the BD Max Extended Enteric Bacterial Panel for Detection of Yersinia enterocolitica, Enterotoxigenic Escherichia coli, Vibrio, and Plesiomonas shigelloides from Stool Specimens","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Becton Dickinson (Canada); University of Calgary","funders":"","keywords":"Plesiomonas shigelloides; Yersinia enterocolitica; Microbiology; Vibrionaceae; Enterotoxigenic Escherichia coli; Aeromonas; Medicine; Biology; Escherichia coli; Enterotoxin; Bacteria","score_opus":0.07839641489086292,"score_gpt":0.38871320493463085,"score_spread":0.31031679004376794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2753835675","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99325234,0.0003677582,0.005487363,0.000021235875,0.00001593363,0.000051654657,0.00020970355,0.0000484556,0.0005454641],"genre_scores_gemma":[0.9896102,0.000089186826,0.009676967,0.000028101054,0.000008023707,0.00003551608,0.00036060074,0.000009023241,0.00018240411],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9932286,0.0028986363,0.000571931,0.0011686991,0.0019677181,0.00016445477],"domain_scores_gemma":[0.9938955,0.0021118724,0.0010299823,0.0006434913,0.0020344409,0.0002847149],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0063613937,0.00047256492,0.00053811615,0.0010071074,0.00024837095,0.0005884349,0.00032841766,0.0004340103,0.0006998265],"category_scores_gemma":[0.0066792085,0.0003799508,0.00035571167,0.00060144684,0.00028308688,0.0005083641,0.0009095616,0.0003538514,0.0003072204],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026022862,0.00029931727,0.78253204,0.0002013354,0.0002416762,0.00016536494,0.00048176333,0.000586738,0.18718794,0.00005002518,0.00021762676,0.025433902],"study_design_scores_gemma":[0.000089221605,0.006644278,0.87569296,0.00007171543,0.00027767793,0.0031408898,0.0005369827,0.0078906175,0.10392948,0.000040031162,0.0016405585,0.000045538527],"about_ca_topic_score_codex":0.00050755555,"about_ca_topic_score_gemma":0.0012513739,"teacher_disagreement_score":0.0063613937,"about_ca_system_score_codex":0.00020099114,"about_ca_system_score_gemma":0.00020196666,"threshold_uncertainty_score":0.03364265},"labels":[],"label_agreement":null},{"id":"W2754122674","doi":"10.1086/693526","title":"Cristian Berco. <i>From Body to Community: Venereal Disease and Society in Baroque Spain</i>. xvi + 264 pp., tables, bibl., index. Toronto/London: University of Toronto Press, 2016. $65 (cloth).","year":2017,"lang":"en","type":"article","venue":"Isis","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Baroque; Index (typography); Media studies; Art history; Art; Sociology; History; Library science; Computer science","score_opus":0.01250832907400225,"score_gpt":0.2662137059062794,"score_spread":0.2537053768322772,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2754122674","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002577851,0.9193867,0.000112884096,0.030283501,0.030176142,0.000009951699,0.0006062098,0.00012501379,0.019041868],"genre_scores_gemma":[0.0060476945,0.81902874,0.00053682196,0.01127563,0.029642358,0.00003116025,0.0010184508,0.00022393804,0.13219525],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998172,0.00003261128,0.000016217144,0.000041173676,0.00006166647,0.000031225783],"domain_scores_gemma":[0.9994844,0.00015460425,0.00004877986,0.000012292746,0.00017447231,0.00012550432],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004712011,0.0017887648,0.0010290267,0.0023619214,0.0007482689,0.0016692064,0.00090814085,0.0013167566,0.053919196],"category_scores_gemma":[0.0011274118,0.00037075064,0.0004129717,0.003175107,0.00065397355,0.0023011009,0.0009936383,0.0019912603,0.024915775],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031599855,0.000005570359,0.00018825647,0.0004480131,0.000006127313,0.000034013516,0.0000893713,0.00002251572,0.00004362456,0.00061617116,0.9599955,0.038519185],"study_design_scores_gemma":[0.000008504672,0.000010119313,0.0021477942,0.0007998652,0.000007291538,0.00017044744,0.00026358862,0.00002402059,0.000045685258,0.0007237356,0.9957903,0.000008697185],"about_ca_topic_score_codex":0.03389797,"about_ca_topic_score_gemma":0.06282215,"teacher_disagreement_score":0.053919196,"about_ca_system_score_codex":0.0016376926,"about_ca_system_score_gemma":0.0014908946,"threshold_uncertainty_score":0.18037766},"labels":[],"label_agreement":null},{"id":"W2761619601","doi":"10.1111/gcb.13922","title":"Climate change impacts on the conservation outlook of populations on the poleward periphery of species ranges: A case study of Canadian black‐tailed prairie dogs (<i>Cynomys ludovicianus</i>)","year":2017,"lang":"en","type":"article","venue":"Global Change Biology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Parks Canada; University of Calgary","funders":"Canadian Wildlife Federation; Alberta Society of Professional Biologists","keywords":"Climate change; Ecology; Cynomys ludovicianus; Population; Ecosystem; Keystone species; Threatened species; Habitat; Growing season; Grassland; Biology; Geography; Prairie dog; Demography","score_opus":0.16314732141820296,"score_gpt":0.35533356923853004,"score_spread":0.1921862478203271,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2761619601","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992861,0.00008507578,0.000042773037,0.00007274835,8.8096465e-7,0.00000451857,0.00010620952,0.0000013805487,0.00040034117],"genre_scores_gemma":[0.99953187,0.0001192111,0.00013068067,0.000025557825,0.0000016956989,0.0000027611693,0.00008230938,8.1339186e-7,0.000105131425],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99979216,0.000037594888,0.000005380534,0.000033603625,0.00003730456,0.00009394004],"domain_scores_gemma":[0.9995012,0.00009457059,0.00014527308,0.000025954758,0.00010255961,0.00013044196],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004071316,0.00015895524,0.0001552082,0.0005031773,0.0016121714,0.0005872359,0.00051338924,0.00033491975,0.0006140791],"category_scores_gemma":[0.0009997912,0.00008673356,0.00025717827,0.00091445463,0.00073166896,0.00029005823,0.00052835274,0.00038223068,0.000034110817],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054434473,0.000041144467,0.9849999,0.000028269604,0.00005997965,0.0012351377,0.003306128,0.00079044705,0.0010276998,0.00030810037,0.00047930283,0.007669408],"study_design_scores_gemma":[0.0000014448036,0.000022255534,0.99490744,0.000007053122,0.000017879054,0.00025649782,0.0035313354,0.00058731023,0.000043074288,0.000039481863,0.0005790834,0.000007094969],"about_ca_topic_score_codex":0.8623383,"about_ca_topic_score_gemma":0.9701268,"teacher_disagreement_score":0.1376617,"about_ca_system_score_codex":0.005024386,"about_ca_system_score_gemma":0.0027462963,"threshold_uncertainty_score":0.27694476},"labels":[],"label_agreement":null},{"id":"W2770603357","doi":"10.1073/pnas.1717723114","title":"Differential effects of global and local climate data in assessing environmental drivers of epidemic outbreaks","year":2017,"lang":"en","type":"letter","venue":"Proceedings of the National Academy of Sciences","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Outbreak; Differential (mechanical device); Geography; Environmental science; Biology; Virology; Engineering","score_opus":0.030847722588381518,"score_gpt":0.33889118343480146,"score_spread":0.3080434608464199,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2770603357","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07689686,0.002405034,0.005499322,0.8927831,0.009547588,0.00010043401,0.00056989153,0.000080032056,0.012117764],"genre_scores_gemma":[0.6471697,0.0026009437,0.007810258,0.31496194,0.022209186,0.00016343493,0.00029363012,0.000114261034,0.0046765916],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9928854,0.0053569647,0.00048234942,0.00039368044,0.0006217392,0.00025986898],"domain_scores_gemma":[0.88970494,0.09897274,0.0020969927,0.0019142501,0.005965436,0.0013455958],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.021146096,0.00026333673,0.00059746177,0.0006655149,0.0007022989,0.0022126914,0.0010477479,0.0055678203,0.002364634],"category_scores_gemma":[0.095817596,0.00022566106,0.000541641,0.0011234847,0.0012244304,0.0013135469,0.0012612963,0.0062492876,0.0011772319],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027659358,0.0004766478,0.33586234,0.00039460245,0.0006139509,0.005767785,0.0015822808,0.0058191963,0.0023910557,0.017149674,0.3229552,0.30422133],"study_design_scores_gemma":[0.0017160794,0.001434513,0.19530383,0.0022075742,0.0013612285,0.008820622,0.0069820564,0.10682824,0.00984301,0.2183153,0.44663098,0.00055658934],"about_ca_topic_score_codex":0.0042947484,"about_ca_topic_score_gemma":0.0106935715,"teacher_disagreement_score":0.021146096,"about_ca_system_score_codex":0.0018276863,"about_ca_system_score_gemma":0.001213926,"threshold_uncertainty_score":0.11183262},"labels":[],"label_agreement":null},{"id":"W2772566299","doi":"10.24870/cjb.2017-a214","title":"Structural analysis of major translocator – chaperone interaction from Ysa-Ysp T3SS of Yersinia enterocolitica","year":2017,"lang":"en","type":"article","venue":"Canadian Journal of Biotechnology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Yersinia enterocolitica; Chemistry; Biology; Genetics; Bacteria","score_opus":0.015488460691720803,"score_gpt":0.2856107534742198,"score_spread":0.270122292782499,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2772566299","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976422,0.00051264226,0.0005352018,0.000109631306,0.000017318407,0.00001136395,0.00056878227,0.000021030952,0.0005816606],"genre_scores_gemma":[0.9942058,0.00043419318,0.0008452617,0.00006628435,0.000010321606,0.000019253052,0.0033819433,0.000015275804,0.0010217713],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998846,0.00002164015,0.0000073228734,0.000018283166,0.000038547285,0.000029743065],"domain_scores_gemma":[0.99981314,0.000039322676,0.000051861844,0.000009022952,0.00004418217,0.000042431264],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013947612,0.00030563434,0.00024666803,0.00019556558,0.00026636026,0.00019110157,0.0003183056,0.000348537,0.0010055207],"category_scores_gemma":[0.0003063704,0.00013244171,0.00043577573,0.0003952606,0.00014663793,0.00021717242,0.00016345644,0.00051977776,0.00026863263],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007330555,0.00016383406,0.0027778193,0.00016725717,0.0000423036,0.00054586417,0.00018072141,0.0008218386,0.9923384,0.00028371904,0.00034374988,0.0016013824],"study_design_scores_gemma":[0.00017525203,0.0024899358,0.18697529,0.00011993922,0.0002122666,0.0023057163,0.0009913235,0.038718946,0.7545028,0.0004436222,0.012986251,0.000078699326],"about_ca_topic_score_codex":0.002092685,"about_ca_topic_score_gemma":0.0017470613,"teacher_disagreement_score":0.002092685,"about_ca_system_score_codex":0.00046614726,"about_ca_system_score_gemma":0.00022221012,"threshold_uncertainty_score":0.0041609406},"labels":[],"label_agreement":null},{"id":"W2774632352","doi":"10.1098/rstb.2017.0089","title":"Livestock abundance predicts vampire bat demography, immune profiles and bacterial infection risk","year":2018,"lang":"en","type":"article","venue":"Philosophical Transactions of the Royal Society B Biological Sciences","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Sigma Xia; American Society of Mammalogists; Wellcome Trust; American Museum of Natural History; Division of Environmental Biology; Achievement Rewards for College Scientists Foundation; Medical Research Council; Wellcome; Bat Conservation International; University of Georgia","keywords":"Biology; Livestock; Provisioning; Wildlife; Ecology; Foraging; Innate immune system; Immunity; Host (biology); Zoology; Acquired immune system; Pathogen; Immune system; Immunology","score_opus":0.02532374134286166,"score_gpt":0.2784069263069913,"score_spread":0.2530831849641297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2774632352","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995492,0.00007317029,0.00006658832,0.000034588815,7.341443e-7,0.0000014550275,0.00007529739,0.0000023333594,0.00019660647],"genre_scores_gemma":[0.999564,0.000055080942,0.00014149309,0.000009876448,0.0000021850474,0.000003219497,0.00014534,0.0000016043177,0.00007722182],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998838,0.00004807703,0.0000060038797,0.000035097542,0.0000058781884,0.000021208543],"domain_scores_gemma":[0.99934846,0.00019778003,0.0002669497,0.000057863657,0.00004282326,0.00008616695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042626457,0.00012090093,0.00012078271,0.00042389607,0.00024282758,0.00043292006,0.0002138796,0.00032241715,0.0019872796],"category_scores_gemma":[0.0010713306,0.00020562827,0.00017090653,0.0003132023,0.00025375324,0.00036924344,0.00033046637,0.0002671609,0.0002493994],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002389526,0.000010742678,0.9977576,0.0000048440074,0.000019563322,0.000026469172,0.00013148901,0.00023834754,0.0005851102,0.00003162035,0.000066845365,0.0011034718],"study_design_scores_gemma":[9.3952036e-7,0.000017827664,0.9989506,0.000004861793,0.000005278685,0.00006548147,0.00017269634,0.0006553201,0.00002136455,0.000031234085,0.00007325392,0.0000011466334],"about_ca_topic_score_codex":0.009488791,"about_ca_topic_score_gemma":0.024171827,"teacher_disagreement_score":0.009488791,"about_ca_system_score_codex":0.00024324328,"about_ca_system_score_gemma":0.000115480354,"threshold_uncertainty_score":0.018867135},"labels":[],"label_agreement":null},{"id":"W2784935575","doi":"10.4000/books.pum.8086","title":"Un poulain issu du croisement cheval-orignal est-il pensable ?","year":2014,"lang":"fr","type":"book-chapter","venue":"Presses de l’Université de Montréal eBooks","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Art","score_opus":0.00730177983182053,"score_gpt":0.19760734116685189,"score_spread":0.19030556133503135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2784935575","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.032271236,0.1936097,0.0050362498,0.03088234,0.008381163,0.00004931892,0.00021440454,0.00024139602,0.7293142],"genre_scores_gemma":[0.088283926,0.03140582,0.0023813176,0.003556356,0.0007682726,0.000016958853,0.0000898801,0.00011353611,0.873384],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9997744,0.00004165223,0.000006968305,0.00006833621,0.00006854422,0.00004021702],"domain_scores_gemma":[0.99988973,0.000028009305,0.000012740946,0.000011538082,0.000036298137,0.00002161382],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036769785,0.000533975,0.00032067316,0.000517598,0.0018583739,0.002951462,0.00043923332,0.0015018543,0.013166824],"category_scores_gemma":[0.00047066755,0.00020563004,0.00028701164,0.0004157717,0.0043593305,0.002758104,0.0011107414,0.0020577896,0.0044572153],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003585177,0.00008805516,0.0027856252,0.0008464505,0.00003395933,0.0015070757,0.018791974,0.00023087612,0.010967468,0.48740122,0.16470087,0.31228784],"study_design_scores_gemma":[0.0000029674563,0.000053222848,0.0011475018,0.00028729145,0.0000056960575,0.00044515118,0.002027994,0.00005697701,0.0006481138,0.0067760516,0.9885389,0.0000101541655],"about_ca_topic_score_codex":0.019930534,"about_ca_topic_score_gemma":0.031962816,"teacher_disagreement_score":0.019930534,"about_ca_system_score_codex":0.0024442074,"about_ca_system_score_gemma":0.0013886383,"threshold_uncertainty_score":0.044047356},"labels":[],"label_agreement":null},{"id":"W2787333890","doi":"10.5751/es-09289-230122","title":"Using Inuit traditional ecological knowledge for detecting and monitoring avian cholera among Common Eiders in the eastern Canadian Arctic","year":2018,"lang":"en","type":"article","venue":"Ecology and Society","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Carleton University; Environment and Climate Change Canada","funders":"Environment and Climate Change Canada; Nunavut Wildlife Research Trust","keywords":"Arctic; Geography; Ecology; Cholera; Traditional knowledge; Fishery; Biology","score_opus":0.0531122509211775,"score_gpt":0.318200585248848,"score_spread":0.2650883343276705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2787333890","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98153645,0.0020989052,0.001963094,0.0008092383,0.000037856826,0.0002095478,0.0030830451,0.000031182914,0.010230584],"genre_scores_gemma":[0.9911641,0.0012283517,0.0055521973,0.00019894859,0.00001659437,0.000071363356,0.0010372663,0.000006406124,0.0007249193],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99833834,0.00044137557,0.00014078718,0.00022329864,0.0005152502,0.00034091444],"domain_scores_gemma":[0.9939254,0.00094285264,0.0010216298,0.00025274514,0.0032876213,0.0005698362],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003414109,0.00039071596,0.00036998306,0.0040325527,0.0022209953,0.0016675997,0.001552062,0.0005013267,0.000981291],"category_scores_gemma":[0.007840747,0.00026720524,0.0002705826,0.0027980278,0.0007185668,0.0009858786,0.0017712116,0.00047447172,0.00018053046],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007981012,0.000120481745,0.93811977,0.00025042755,0.00013580275,0.00023335137,0.0092536425,0.000494633,0.0010916211,0.00016548067,0.0018856989,0.04816937],"study_design_scores_gemma":[0.000007252729,0.00007547887,0.97825444,0.00034933645,0.00012235876,0.0001766531,0.01247468,0.002048188,0.00076061575,0.0002332893,0.0054593114,0.000038392813],"about_ca_topic_score_codex":0.91277087,"about_ca_topic_score_gemma":0.9729661,"teacher_disagreement_score":0.08722913,"about_ca_system_score_codex":0.006358688,"about_ca_system_score_gemma":0.007262413,"threshold_uncertainty_score":0.17548561},"labels":[],"label_agreement":null},{"id":"W2788508979","doi":"10.1016/s1473-3099(18)30077-x","title":"Potential plague exportation from Madagascar via international air travel","year":2018,"lang":"en","type":"letter","venue":"The Lancet Infectious Diseases","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; St. Michael's Hospital; Toronto General Hospital; University of Toronto","funders":"","keywords":"Plague (disease); Outbreak; Geography; Public health; Scopus; Vulnerability (computing); Infectious disease (medical specialty); Index (typography); Socioeconomics; Environmental health; Disease; Demography; Medicine; Virology; Political science; MEDLINE; Sociology; Law; Computer security","score_opus":0.010995482443916151,"score_gpt":0.2668862821485246,"score_spread":0.2558907997046085,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2788508979","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0042055,0.0017491925,0.000122755,0.97836727,0.007887722,0.0000150648675,0.00006783397,0.000018991705,0.0075656553],"genre_scores_gemma":[0.060755208,0.0036901517,0.00036811517,0.8755377,0.038524278,0.00006419353,0.00009244768,0.000029394258,0.020938447],"study_design_codex":"not_applicable","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99946946,0.00016835648,0.000049749186,0.00006564839,0.00008639141,0.00016033783],"domain_scores_gemma":[0.99885666,0.0005672196,0.00012589466,0.00005139344,0.00016812077,0.00023074538],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007978893,0.00043608947,0.0004330354,0.00022552148,0.0017085455,0.0015390781,0.0005021256,0.020228364,0.005918852],"category_scores_gemma":[0.006567369,0.00025321695,0.00046449853,0.00022994411,0.0010268624,0.0018575541,0.0010905131,0.014692729,0.0021062945],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016197319,0.0000931459,0.008312764,0.00015537522,0.000038954244,0.020863067,0.0011597858,0.0000978252,0.00092303584,0.0058432817,0.93240136,0.02994949],"study_design_scores_gemma":[0.00019617601,0.00017851609,0.0063188095,0.0004894324,0.00007719658,0.008536005,0.0025446464,0.0006631449,0.0006825635,0.009120541,0.9711401,0.00005293553],"about_ca_topic_score_codex":0.0068063554,"about_ca_topic_score_gemma":0.010785035,"teacher_disagreement_score":0.020228364,"about_ca_system_score_codex":0.0015532558,"about_ca_system_score_gemma":0.0011002697,"threshold_uncertainty_score":0.019800544},"labels":[],"label_agreement":null},{"id":"W2790432050","doi":"","title":"Habitat selection by songbirds in Manitoba's tall-grass prairie: a multi-scale analysis","year":2010,"lang":"en","type":"dissertation","venue":"Mspace (University of Manitoba)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Institute for Wetland and Waterfowl Research, Ducks Unlimited Canada","keywords":"Habitat; Selection (genetic algorithm); Scale (ratio); Geography; Ecology; Forestry; Environmental science; Cartography; Biology; Computer science","score_opus":0.00882770409900603,"score_gpt":0.24362661116819653,"score_spread":0.23479890706919052,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2790432050","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995808,0.000051527117,0.000045647015,0.00001077086,8.591411e-7,0.0000059029526,0.00017273774,0.0000017171398,0.00012999024],"genre_scores_gemma":[0.9988643,0.00008861006,0.00019216079,0.000017874196,0.0000017437517,0.000018798677,0.00037593002,0.0000019569736,0.00043859018],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99986625,0.000037235775,0.0000064690275,0.000030110856,0.00002301065,0.000036931982],"domain_scores_gemma":[0.9996458,0.000057598507,0.00007446489,0.000022411701,0.00008830806,0.00011141275],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032840826,0.00025912217,0.00023396086,0.00068314484,0.0006917847,0.0005291069,0.0004913854,0.0002073575,0.0010797591],"category_scores_gemma":[0.00047439846,0.0002871096,0.0002644594,0.0010417447,0.00043494115,0.00018697107,0.00053611153,0.0002522353,0.00018037079],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037583202,0.000019192528,0.9952744,0.00001387418,0.000055227087,0.000046003086,0.0008942284,0.00006817313,0.0015799485,0.000014096725,0.00009443561,0.0019027106],"study_design_scores_gemma":[9.304688e-7,0.000011228826,0.9992906,0.0000019561703,0.0000066960797,0.000012349625,0.00051780196,0.00006790512,0.000024875726,0.0000021284168,0.000062361876,0.0000010415649],"about_ca_topic_score_codex":0.4507798,"about_ca_topic_score_gemma":0.75409335,"teacher_disagreement_score":0.5492202,"about_ca_system_score_codex":0.0013906765,"about_ca_system_score_gemma":0.0008516309,"threshold_uncertainty_score":0.89631194},"labels":[],"label_agreement":null},{"id":"W2791126850","doi":"10.1128/jb.00050-18","title":"A Single Amino Acid Change in the Response Regulator PhoP, Acquired during Yersinia pestis Evolution, Affects PhoP Target Gene Transcription and Polymyxin B Susceptibility","year":2018,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Canadian Institute for Advanced Research; Toronto Metropolitan University","funders":"National Institute of Allergy and Infectious Diseases; National Health and Medical Research Council","keywords":"Biology; Yersinia pestis; Virulence; Mutant; Genetics; Gene; Response regulator; Microbiology; Yersinia pseudotuberculosis","score_opus":0.01792021972514453,"score_gpt":0.27150557610203246,"score_spread":0.25358535637688795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791126850","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9994037,0.000099095014,0.00018592991,0.0000126877185,0.0000070308465,0.00000433362,0.00013481523,0.0000063314837,0.00014607339],"genre_scores_gemma":[0.99934393,0.000053878837,0.00015288041,0.000016497956,0.0000027656176,0.000004087509,0.0001900656,0.000004472887,0.00023135252],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998964,0.00002235014,0.000013908681,0.00002640937,0.000017944221,0.000022902077],"domain_scores_gemma":[0.9998574,0.000033337932,0.00004684275,0.000010993055,0.000011055832,0.00004025958],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000111240544,0.00030215475,0.00016952145,0.00013466184,0.000086931126,0.0001979504,0.00017712,0.00032535582,0.0009221046],"category_scores_gemma":[0.00018039056,0.00010352979,0.00021428926,0.00014977841,0.00022333268,0.00012764508,0.00015663412,0.00035445174,0.0001809475],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027698657,0.000030073476,0.0010216159,0.000012051729,0.000008080184,0.00011403837,0.000011606394,0.0000376653,0.9980661,0.000015036917,0.0000092859655,0.00039750838],"study_design_scores_gemma":[0.000057921112,0.0014203443,0.11639626,0.000010692974,0.00007516645,0.0014090297,0.00013825437,0.0016669561,0.87763846,0.00004117474,0.0011249701,0.000020754964],"about_ca_topic_score_codex":0.0005879278,"about_ca_topic_score_gemma":0.0004441318,"teacher_disagreement_score":0.0009221046,"about_ca_system_score_codex":0.00017928677,"about_ca_system_score_gemma":0.00007179081,"threshold_uncertainty_score":0.0030847788},"labels":[],"label_agreement":null},{"id":"W2800301384","doi":"10.1038/s41586-018-0094-2","title":"137 ancient human genomes from across the Eurasian steppes","year":2018,"lang":"en","type":"article","venue":"Nature","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":513,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Lundbeckfonden; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Villum Fonden","keywords":"Steppe; Genome; Biology; Evolutionary biology; Geography; Genetics; Ecology; Gene","score_opus":0.01056559138120707,"score_gpt":0.33144877752576546,"score_spread":0.3208831861445584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2800301384","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9853478,0.004110748,0.002186032,0.00021796815,0.000025459873,0.00001678672,0.0052715787,0.000041964628,0.0027816407],"genre_scores_gemma":[0.9862281,0.002044189,0.0017233304,0.00017101264,0.000023464721,0.0000146778675,0.0069352556,0.000045445442,0.0028144496],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998085,0.000025617763,0.000014367125,0.000082277125,0.000036699323,0.0000325249],"domain_scores_gemma":[0.99973816,0.00009013895,0.00004986394,0.000035438363,0.000045615812,0.000040850773],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002869862,0.00029244402,0.00038338386,0.0010388701,0.0005044061,0.00067417475,0.00027542142,0.00044709846,0.0033524667],"category_scores_gemma":[0.0005708707,0.00021575348,0.00031382192,0.0019523333,0.00034994198,0.00027569645,0.0005854752,0.00045912052,0.00050098135],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004708656,0.000097960554,0.13418064,0.0016948374,0.0015219796,0.0064370376,0.006527432,0.0024605321,0.70849174,0.003187706,0.0020984318,0.12859309],"study_design_scores_gemma":[0.00010462261,0.00023646896,0.92481863,0.0003282151,0.0005916287,0.0068108323,0.0016870875,0.0009474684,0.019508144,0.0018068161,0.04311119,0.000048875627],"about_ca_topic_score_codex":0.0042574443,"about_ca_topic_score_gemma":0.008264251,"teacher_disagreement_score":0.0042574443,"about_ca_system_score_codex":0.00041458337,"about_ca_system_score_gemma":0.00039494422,"threshold_uncertainty_score":0.011215091},"labels":[],"label_agreement":null},{"id":"W2801960011","doi":"10.1093/envhis/emy010","title":"The Great Epizootic of 1872–73: Networks of Animal Disease in North American Urban Environments","year":2018,"lang":"en","type":"article","venue":"Environmental History","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"York University","keywords":"Epizootic; Outbreak; Urbanization; Geography; Centrality; Epidemic disease; Infectious disease (medical specialty); Disease; Ecology; Biology; Virology; Medicine","score_opus":0.006210124339766032,"score_gpt":0.21045753937137782,"score_spread":0.20424741503161178,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2801960011","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908811,0.00050554326,0.00034416944,0.00082602823,0.000012444958,0.000006540481,0.00008961617,0.000007003514,0.0073276814],"genre_scores_gemma":[0.99865437,0.00041693693,0.00012839872,0.000047330534,0.000008327686,0.0000040699315,0.00005868305,0.0000021217027,0.0006797908],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99984324,0.00004307479,0.0000037044908,0.000029342535,0.00002558845,0.000054944056],"domain_scores_gemma":[0.99970585,0.00004546095,0.00009945402,0.000021652548,0.000054304295,0.000073164934],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024711032,0.00009695015,0.000106199244,0.0007911862,0.0020082186,0.0015119258,0.00024846665,0.0002815545,0.0017493897],"category_scores_gemma":[0.0006400189,0.00012814852,0.0000875,0.0013924476,0.0024145884,0.0013624207,0.0016716588,0.00034840358,0.00008862897],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015000734,0.000050298277,0.6998073,0.00010916055,0.000056653957,0.002128892,0.21969289,0.0010829935,0.0033979747,0.01966056,0.0049062115,0.048957083],"study_design_scores_gemma":[0.0000016974576,0.000022190312,0.89507866,0.00003231499,0.000013057409,0.00028675908,0.082438536,0.00026082736,0.00019894844,0.0011970525,0.020458858,0.000011026291],"about_ca_topic_score_codex":0.12916584,"about_ca_topic_score_gemma":0.41033372,"teacher_disagreement_score":0.12916584,"about_ca_system_score_codex":0.0032240867,"about_ca_system_score_gemma":0.0014304202,"threshold_uncertainty_score":0.256828},"labels":[],"label_agreement":null},{"id":"W2804240288","doi":"10.1128/genomea.00416-18","title":"First Complete Genome Sequence of Yersinia massiliensis","year":2018,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"","keywords":"Biology; Whole genome sequencing; Plasmid; Genome; Genetics; Chromosome; DNA sequencing; Computational biology; Sequence (biology); Gene","score_opus":0.0400914430342066,"score_gpt":0.29864294553696114,"score_spread":0.25855150250275455,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2804240288","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5068043,0.013273656,0.03762292,0.0016252579,0.00050380034,0.0006915516,0.42691222,0.0037365195,0.008829773],"genre_scores_gemma":[0.18471669,0.0040445724,0.04446924,0.00032265444,0.00016657749,0.00040603656,0.75703514,0.0004474733,0.008391661],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980944,0.000021260994,0.000021381737,0.0000527163,0.000056972953,0.000038254795],"domain_scores_gemma":[0.9995555,0.000073455805,0.000080104175,0.000044697037,0.00014772385,0.00009847852],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027102177,0.0011058942,0.0008851515,0.0017974919,0.0005771025,0.0006936174,0.00051478064,0.0006563982,0.004254884],"category_scores_gemma":[0.0006023825,0.00030032414,0.00068754214,0.0018957991,0.00022922963,0.00044362215,0.0006152713,0.0010931153,0.0029063453],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013397549,0.00012679205,0.0031497697,0.0012419526,0.0000876774,0.0005822297,0.0002772548,0.00065590953,0.9465591,0.00039580427,0.0063693123,0.039214477],"study_design_scores_gemma":[0.0004925567,0.0014093091,0.31677383,0.000506271,0.0009212072,0.0017652455,0.00063092104,0.00477669,0.36398476,0.0012310479,0.30732977,0.00017836755],"about_ca_topic_score_codex":0.0058496944,"about_ca_topic_score_gemma":0.0046254327,"teacher_disagreement_score":0.0058496944,"about_ca_system_score_codex":0.0007962157,"about_ca_system_score_gemma":0.0014605542,"threshold_uncertainty_score":0.014234006},"labels":[],"label_agreement":null},{"id":"W2805427744","doi":"10.14745/ccdr.v43i02a03f","title":"Utilisation d'un taux d'incidence mobile sur 40 jours pour surveiller la coqueluche en Nouvelle-Écosse en 2015","year":2017,"lang":"fr","type":"article","venue":"Relevé des maladies transmissibles au Canada","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Humanities; Art","score_opus":0.013409233921532654,"score_gpt":0.26667736131489145,"score_spread":0.2532681273933588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2805427744","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97352636,0.005540572,0.0034168998,0.0007652007,0.00014561464,0.00011441639,0.007936031,0.00020287783,0.008351972],"genre_scores_gemma":[0.98175967,0.0023324047,0.0036535207,0.00015972684,0.00004800743,0.00007285262,0.0025760322,0.000022770788,0.00937508],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990404,0.00010904733,0.00005305053,0.00016444847,0.00040424528,0.00022879688],"domain_scores_gemma":[0.99795485,0.00040828006,0.00028438735,0.000056420853,0.0011071404,0.00018893366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009327226,0.00064050744,0.00052431365,0.0013988528,0.0008209078,0.0017051112,0.00047220313,0.00083670835,0.0026874053],"category_scores_gemma":[0.003013124,0.00022940389,0.0005468219,0.0012741613,0.0004165318,0.00056793215,0.00043795476,0.00077228574,0.0006032967],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010182674,0.00019479338,0.8741395,0.00026874745,0.0001898907,0.0005976445,0.0036059816,0.0015691014,0.0068838038,0.0006376305,0.0032525454,0.10764197],"study_design_scores_gemma":[0.000031837746,0.0006741668,0.97396946,0.00021900333,0.00012531705,0.0005918596,0.0023324145,0.0017761963,0.0039062942,0.00011774536,0.016206952,0.000048767688],"about_ca_topic_score_codex":0.66740096,"about_ca_topic_score_gemma":0.643996,"teacher_disagreement_score":0.33259904,"about_ca_system_score_codex":0.0042000674,"about_ca_system_score_gemma":0.0034120297,"threshold_uncertainty_score":0.66911554},"labels":[],"label_agreement":null},{"id":"W2883011504","doi":"10.14745/ccdr.v41i03a02","title":"Monitoring invasive bacterial diseases in the North American Arctic via the International Circumpolar Surveillance Project","year":2015,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Circumpolar star; Arctic; The arctic; Geography; Oceanography; Geology","score_opus":0.02673322919054501,"score_gpt":0.2871368516873314,"score_spread":0.2604036224967864,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2883011504","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9780513,0.00096072356,0.0010737745,0.00026330783,0.000042854233,0.000162795,0.004666595,0.000049180064,0.014729521],"genre_scores_gemma":[0.98787785,0.0017563676,0.0036804057,0.00011712266,0.000026596177,0.000087783585,0.0029762667,0.000007187521,0.0034705],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995383,0.000098193144,0.00002891301,0.000058539325,0.00019407732,0.00008195156],"domain_scores_gemma":[0.9980288,0.00011531341,0.00028566265,0.00004237756,0.0011716039,0.00035616214],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012984371,0.000328557,0.00013996588,0.0018255746,0.0012997839,0.00057860604,0.00025544566,0.0001603945,0.0004733471],"category_scores_gemma":[0.0010786919,0.00009070218,0.00012791094,0.0017768196,0.00020277224,0.00018030372,0.00037601776,0.00021134582,0.000098001976],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000861903,0.000053892145,0.97728115,0.000059484613,0.00003566775,0.00014390974,0.0011114768,0.00048896216,0.0020468489,0.00009658492,0.0012421588,0.017353764],"study_design_scores_gemma":[0.000003127365,0.000100695426,0.9898835,0.000055509416,0.000039368228,0.000112423244,0.0024939214,0.00048231304,0.0012349904,0.00002745859,0.005559726,0.000007045059],"about_ca_topic_score_codex":0.6954292,"about_ca_topic_score_gemma":0.7919937,"teacher_disagreement_score":0.3045708,"about_ca_system_score_codex":0.0016764731,"about_ca_system_score_gemma":0.0054978714,"threshold_uncertainty_score":0.61272895},"labels":[],"label_agreement":null},{"id":"W2883194597","doi":"10.1101/370841","title":"Chronic infections can shape epidemic exposure: Pathogen co-occurrence networks in the Serengeti lions","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Ministerio de Economía y Competitividad; University of Minnesota; U.S. Department of Agriculture; National Science Foundation","keywords":"Pathogen; Biology; Disease; Ecology; Immunology; Medicine; Pathology","score_opus":0.018358129958056246,"score_gpt":0.270589231514094,"score_spread":0.25223110155603773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2883194597","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99885166,0.000054473632,0.00041700972,0.000059557806,0.0000013628197,0.0000031206712,0.00018171372,0.0000091071915,0.0004221125],"genre_scores_gemma":[0.9992623,0.00003678598,0.0002462902,0.000020044337,0.0000027078959,0.0000069004595,0.00020012619,0.000002668513,0.00022214655],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99984455,0.000035158002,0.000006025217,0.000054742868,0.0000120288305,0.000047436544],"domain_scores_gemma":[0.9992094,0.00021401932,0.00031752442,0.000046987854,0.00007180566,0.0001401552],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036151646,0.00013007126,0.00019045781,0.0011218233,0.00042681958,0.0009293167,0.00028834434,0.00034470015,0.002042683],"category_scores_gemma":[0.0013393175,0.00016385951,0.00018728618,0.0006955463,0.0005475445,0.00076832407,0.00072542595,0.0003260989,0.00018751221],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025758284,0.00005549182,0.9529568,0.00008910267,0.00013342452,0.0002611095,0.0022059341,0.00727885,0.02506748,0.0014192981,0.00077779643,0.009497123],"study_design_scores_gemma":[0.000006229742,0.000050313945,0.9761422,0.000019122588,0.000032511438,0.000115268114,0.0015660975,0.018999934,0.0006435909,0.0013994422,0.0010065793,0.000018727955],"about_ca_topic_score_codex":0.015106006,"about_ca_topic_score_gemma":0.023034673,"teacher_disagreement_score":0.015106006,"about_ca_system_score_codex":0.00094235735,"about_ca_system_score_gemma":0.00032341058,"threshold_uncertainty_score":0.030036151},"labels":[],"label_agreement":null},{"id":"W2884026426","doi":"10.1525/cse.2018.001131","title":"Managing Populations, Diseases, and Landowner Perceptions of Prairie Dogs for Black-Footed Ferret Reintroduction","year":2018,"lang":"en","type":"article","venue":"Case Studies in the Environment","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Royal University","funders":"","keywords":"Prairie dog; Cynomys ludovicianus; Endangered species; Biology; Ecology; Keystone species; Wildlife; Grassland; Threatened species; Habitat","score_opus":0.0339689869555506,"score_gpt":0.33854071500793415,"score_spread":0.30457172805238353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2884026426","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983903,0.0001925178,0.000072887284,0.00037770573,0.0000037051202,0.00003006592,0.000010677256,0.000004039202,0.0009180788],"genre_scores_gemma":[0.99906427,0.00025089414,0.0003246821,0.000068574554,0.000007249547,0.000024165594,0.000020611582,4.976218e-7,0.00023916822],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99951386,0.0002570372,0.000021371583,0.00003529181,0.000061538674,0.00011102578],"domain_scores_gemma":[0.99917394,0.00014217071,0.00036517196,0.000017896524,0.000093308554,0.0002075179],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012995135,0.00018981023,0.000105731604,0.0003684714,0.00063273846,0.0006529746,0.00038735036,0.0004208355,0.0008380073],"category_scores_gemma":[0.0025385888,0.000077317265,0.00013308317,0.00015959036,0.00029916907,0.0005630981,0.00046776969,0.00027439996,0.000106947715],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011912555,0.0012254687,0.90847135,0.00012943293,0.00004604922,0.0007501055,0.010707408,0.00043266627,0.0036512678,0.00015856838,0.001308146,0.073000446],"study_design_scores_gemma":[0.000011561168,0.0014698027,0.96715784,0.00009604405,0.00003548821,0.00047357654,0.02519333,0.0007880608,0.00061935023,0.00008285423,0.0040572756,0.000014843461],"about_ca_topic_score_codex":0.005969551,"about_ca_topic_score_gemma":0.021717273,"teacher_disagreement_score":0.005969551,"about_ca_system_score_codex":0.00060973625,"about_ca_system_score_gemma":0.0006282341,"threshold_uncertainty_score":0.011869609},"labels":[],"label_agreement":null},{"id":"W2885351657","doi":"10.1073/pnas.1809775115","title":"Human ectoparasite transmission of the plague during the Second Pandemic is only weakly supported by proposed mathematical models","year":2018,"lang":"en","type":"letter","venue":"Proceedings of the National Academy of Sciences","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Plague (disease); Pandemic; Virology; Transmission (telecommunications); Disease transmission; Biology; Influenza pandemic; Coronavirus disease 2019 (COVID-19); Geography; Medicine; Computer science; Infectious disease (medical specialty); Telecommunications","score_opus":0.03222319506891905,"score_gpt":0.31402809493069994,"score_spread":0.2818048998617809,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2885351657","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12736343,0.002955254,0.036009975,0.7745739,0.0035125145,0.000031681968,0.00064842636,0.00015089735,0.054753903],"genre_scores_gemma":[0.94766754,0.0032367674,0.0032687262,0.033416685,0.0045886044,0.00007988611,0.00021253449,0.00003897715,0.007490149],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99926907,0.00041081195,0.00003685611,0.00010147031,0.000085745494,0.00009604597],"domain_scores_gemma":[0.9874068,0.0096555995,0.0008127853,0.001009462,0.0007647815,0.00035064205],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002295376,0.00031929673,0.0005828959,0.0003522067,0.00056598114,0.0014462598,0.001539531,0.0033484926,0.004030647],"category_scores_gemma":[0.023860205,0.00020509762,0.0005759814,0.00029758798,0.00126271,0.0018322312,0.0008100962,0.0037271548,0.001611708],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000744207,0.00015827632,0.025320703,0.00042478458,0.00032211354,0.0042015053,0.00072928297,0.046730854,0.0025711188,0.6990453,0.17305231,0.046699516],"study_design_scores_gemma":[0.00015674607,0.00007713755,0.0042162733,0.00015275886,0.000078500525,0.001956835,0.00031049753,0.17907995,0.0006701296,0.7801581,0.03308168,0.00006139587],"about_ca_topic_score_codex":0.0019513996,"about_ca_topic_score_gemma":0.0019840149,"teacher_disagreement_score":0.004030647,"about_ca_system_score_codex":0.0019198147,"about_ca_system_score_gemma":0.00061174395,"threshold_uncertainty_score":0.013929367},"labels":[],"label_agreement":null},{"id":"W2885679362","doi":"10.7765/9780719094989.00009","title":"Disease and Welsh society","year":2016,"lang":"en","type":"book-chapter","venue":"Manchester University Press eBooks","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Welsh; Smallpox; Plague (disease); Disease; Geography; Rural area; Malnutrition; Epidemic disease; Quarter (Canadian coin); Period (music); Socioeconomics; Demography; Medicine; Archaeology; Vaccination; Virology","score_opus":0.017932129206633816,"score_gpt":0.21479503624324053,"score_spread":0.19686290703660672,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2885679362","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0058697113,0.06410645,0.00023517368,0.017086511,0.016616862,0.000042180167,0.00032305313,0.00011170498,0.8956083],"genre_scores_gemma":[0.02074023,0.016268058,0.00018803691,0.001936141,0.0014886269,0.000031491112,0.0002478232,0.00003165494,0.959068],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997458,0.00004209843,0.000010066181,0.00003367434,0.000059602986,0.00010882585],"domain_scores_gemma":[0.9998136,0.000024383346,0.000010186966,0.00001695505,0.000047616144,0.00008728041],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033716022,0.0008755303,0.00026185907,0.0012672324,0.0028583398,0.0049065207,0.000466291,0.0017702441,0.10761877],"category_scores_gemma":[0.0006218218,0.00018360416,0.00017298787,0.0012545688,0.0018286384,0.0027442037,0.003608292,0.0013528926,0.025878765],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054443746,0.00004944157,0.00088946335,0.00029425666,0.000005265595,0.00038637448,0.0033669327,0.00008206402,0.0006267032,0.10153676,0.61674505,0.27596322],"study_design_scores_gemma":[0.0000015488765,0.000006666882,0.0003305225,0.00006373586,5.9565775e-7,0.000043312968,0.00027081397,0.0000055453597,0.000020259802,0.0010755032,0.9981798,0.000001724726],"about_ca_topic_score_codex":0.015104161,"about_ca_topic_score_gemma":0.034687627,"teacher_disagreement_score":0.10761877,"about_ca_system_score_codex":0.0027280075,"about_ca_system_score_gemma":0.002605515,"threshold_uncertainty_score":0.3600207},"labels":[],"label_agreement":null},{"id":"W2888231152","doi":"10.4095/296857","title":"Glissements de terrain historiques qui ont causé des décès au Canada (1771-2014)","year":2015,"lang":"fr","type":"report","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Natural Resources Canada","funders":"","keywords":"Geology","score_opus":0.02980125256426812,"score_gpt":0.3090056617943093,"score_spread":0.2792044092300412,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2888231152","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8273406,0.003979294,0.0012711427,0.0029144404,0.0006422827,0.00026746586,0.028421665,0.00023687058,0.1349262],"genre_scores_gemma":[0.77208763,0.004491809,0.0024444063,0.00048148865,0.0001222575,0.00006643862,0.010962912,0.00007927319,0.20926385],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99942684,0.000012209752,0.000010792932,0.00004025061,0.0003057589,0.00020412252],"domain_scores_gemma":[0.9991233,0.000046774305,0.000109510154,0.00003061227,0.00048678814,0.00020314635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023086327,0.0003998,0.00020205873,0.0023799299,0.0041443557,0.0014689987,0.0005106024,0.00065861485,0.008862743],"category_scores_gemma":[0.0011160498,0.00018570233,0.0003738455,0.0034859974,0.0011475972,0.0003756373,0.0013166525,0.0011890245,0.0009485789],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00076095137,0.00020288854,0.53944933,0.0007406608,0.00027925964,0.01388376,0.02924806,0.0031825018,0.010206718,0.011519518,0.13709627,0.25343],"study_design_scores_gemma":[0.000008983322,0.000043214714,0.75810504,0.00015266135,0.000026051259,0.00082193036,0.012702068,0.00033750167,0.0016620979,0.00035015857,0.2257491,0.000041278814],"about_ca_topic_score_codex":0.9789723,"about_ca_topic_score_gemma":0.9934823,"teacher_disagreement_score":0.021027684,"about_ca_system_score_codex":0.016243137,"about_ca_system_score_gemma":0.01922845,"threshold_uncertainty_score":0.11785275},"labels":[],"label_agreement":null},{"id":"W2888909797","doi":"10.14745/ccdr.v40i03a04f","title":"Enquête sur les pratiques de surveillance et de vaccination relatives à la coqueluche au Canada, 2012","year":2014,"lang":"fr","type":"article","venue":"Relevé des maladies transmissibles au Canada","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Humanities; Political science; Art","score_opus":0.009429988294991592,"score_gpt":0.25067359440203274,"score_spread":0.24124360610704115,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2888909797","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12934244,0.25076148,0.0040594665,0.54574347,0.0048699873,0.000623659,0.011430902,0.000343794,0.05282485],"genre_scores_gemma":[0.60348016,0.2089767,0.011498632,0.074842975,0.0022725915,0.00041578634,0.0067474633,0.00014219843,0.091623515],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9962708,0.00046312044,0.00024107644,0.0003572058,0.0015175544,0.0011501751],"domain_scores_gemma":[0.980378,0.001663813,0.0009312154,0.00015997428,0.0136518935,0.0032151989],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005347878,0.00052213174,0.0004358204,0.0020816273,0.005357159,0.0042482708,0.001564686,0.0018666107,0.004027448],"category_scores_gemma":[0.010488651,0.00039472518,0.00042345564,0.0035574243,0.0021496825,0.00090825855,0.0012183668,0.0034289425,0.00034148138],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006071089,0.00020393447,0.16235363,0.0037597516,0.00018375197,0.0010848115,0.01631524,0.0026254759,0.00584629,0.02095654,0.37715608,0.40890732],"study_design_scores_gemma":[0.00005715497,0.00016154506,0.33415702,0.0032438778,0.00012899643,0.00033412766,0.010502809,0.0008297482,0.0017526591,0.0008720875,0.6478133,0.00014663998],"about_ca_topic_score_codex":0.99566585,"about_ca_topic_score_gemma":0.9974232,"teacher_disagreement_score":0.10758386,"about_ca_system_score_codex":0.10758386,"about_ca_system_score_gemma":0.30437315,"threshold_uncertainty_score":0.7805792},"labels":[],"label_agreement":null},{"id":"W2889928331","doi":"10.1086/699602","title":"Plague and Violence in Early Modern Italy","year":2018,"lang":"en","type":"article","venue":"Renaissance Quarterly","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"","keywords":"Plague (disease); Nobility; Homicide; Context (archaeology); Criminology; Poverty; Geography; History; Outbreak; Politics; Political science; Vagrancy; Rural area; Socioeconomics; Sociology; Ancient history; Law; Archaeology; Poison control; Suicide prevention","score_opus":0.009967966110164594,"score_gpt":0.27069557248676757,"score_spread":0.26072760637660297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889928331","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98577905,0.004505905,0.00003922975,0.0003195398,0.000012388556,0.000006026913,0.000025390691,0.0000012805474,0.009311239],"genre_scores_gemma":[0.9944917,0.0032792692,0.000046427213,0.00008834046,0.000044857534,0.0000053508606,0.00003570438,0.0000010304659,0.0020073492],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997106,0.000120548764,0.000011287478,0.000025818572,0.00002920125,0.00010241364],"domain_scores_gemma":[0.9998258,0.000027977347,0.00009811691,0.000008265522,0.00001217729,0.000027734937],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042300738,0.00013740272,0.00015811084,0.0014527114,0.0011294268,0.0013120858,0.00015366507,0.00044424232,0.0013882774],"category_scores_gemma":[0.00060100394,0.00013951816,0.00011462122,0.0013334119,0.0023856575,0.00039982304,0.0010633128,0.00038600617,0.00014181713],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040234264,0.00022243577,0.848648,0.00018136336,0.00004125874,0.00326246,0.07817039,0.00028019203,0.0048248414,0.010835838,0.0017247484,0.051406015],"study_design_scores_gemma":[0.0000013210788,0.000034102348,0.9899221,0.00001895012,0.0000023538,0.00041115438,0.0041086115,0.000014418169,0.000058938633,0.00021710462,0.0052076993,0.0000032262105],"about_ca_topic_score_codex":0.012646454,"about_ca_topic_score_gemma":0.035533372,"teacher_disagreement_score":0.012646454,"about_ca_system_score_codex":0.0017566384,"about_ca_system_score_gemma":0.00037551392,"threshold_uncertainty_score":0.02514571},"labels":[],"label_agreement":null},{"id":"W2892346035","doi":"10.1002/ajhb.23155","title":"Epidemic cycles and environmental pressure in colonial Quebec","year":2018,"lang":"en","type":"article","venue":"American Journal of Human Biology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Montréal","funders":"","keywords":"Demography; Population; Geography","score_opus":0.008270038654188726,"score_gpt":0.30344363043388417,"score_spread":0.29517359177969543,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2892346035","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99602807,0.00028446098,0.00020054798,0.00034887908,0.0000067493893,0.000013042199,0.00087340677,0.000015381585,0.0022295483],"genre_scores_gemma":[0.99888283,0.00010135132,0.00008921945,0.00004223062,0.0000025498482,0.000005001863,0.00036514652,0.0000031052418,0.00050861406],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997056,0.000064864114,0.000012137278,0.000053095926,0.000044901746,0.000119256845],"domain_scores_gemma":[0.9984894,0.00028237706,0.00036103715,0.0000553891,0.0005337888,0.0002779592],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000564809,0.00014067837,0.00015292063,0.0009782126,0.0010093868,0.0007627121,0.0005808026,0.00024607207,0.0025213235],"category_scores_gemma":[0.0027693692,0.00011401296,0.00014403595,0.0012574891,0.0006709753,0.0002651446,0.0004555764,0.0003781376,0.00007822202],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007709755,0.000032643853,0.9821811,0.000023339655,0.000053892723,0.00017805804,0.0010524804,0.002035789,0.00057508604,0.0007978759,0.0013810687,0.011611668],"study_design_scores_gemma":[0.0000040791156,0.00001394446,0.9954845,0.0000123037025,0.000007857356,0.000035374815,0.00045837497,0.002377068,0.000061193765,0.0000719035,0.0014659747,0.000007498456],"about_ca_topic_score_codex":0.96916604,"about_ca_topic_score_gemma":0.9729363,"teacher_disagreement_score":0.03083396,"about_ca_system_score_codex":0.016392542,"about_ca_system_score_gemma":0.0066124354,"threshold_uncertainty_score":0.11893678},"labels":[],"label_agreement":null},{"id":"W2897005141","doi":"10.1101/449553","title":"The genome of the plague-resistant great gerbil reveals species-specific duplication of an MHCII gene","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"McGill University; Universitetet i Oslo; National Science Council; Norges Forskningsråd; Norwegian Sequencing Centre; National Natural Science Foundation of China","keywords":"Biology; Yersinia pestis; Plague (disease); Genetics; Genome; Virology; Gene; Virulence","score_opus":0.016616189083851804,"score_gpt":0.2388264269251833,"score_spread":0.22221023784133148,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897005141","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99122506,0.00089815055,0.0017361833,0.00005887988,0.000022958493,0.000016044494,0.0053500575,0.00010714834,0.00058544293],"genre_scores_gemma":[0.9717407,0.0006026701,0.0068415757,0.00010143141,0.000019421024,0.00003075762,0.018955953,0.00008071685,0.0016266679],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999461,0.0000045797606,0.00000315203,0.00002817474,0.000008875185,0.0000091660095],"domain_scores_gemma":[0.9998944,0.000017676804,0.00003902523,0.0000141834225,0.000009831036,0.000024984125],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006932225,0.0003421207,0.00024834822,0.00042243864,0.0001962644,0.0002932822,0.00014670633,0.00031575072,0.0011279453],"category_scores_gemma":[0.00017337925,0.00013367775,0.00047161404,0.0004145654,0.00014015284,0.00010388611,0.00031093552,0.00033383784,0.0005053718],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016153924,0.000012718762,0.0035167334,0.000090409085,0.00003138293,0.0003237782,0.000062233805,0.00012950294,0.99309087,0.00005216647,0.00009208671,0.0024365787],"study_design_scores_gemma":[0.000056883342,0.00081872696,0.8250882,0.000109715584,0.0003513478,0.0071100513,0.00040861787,0.003056654,0.1388617,0.00046318283,0.023631478,0.000043492688],"about_ca_topic_score_codex":0.0005881851,"about_ca_topic_score_gemma":0.0009070285,"teacher_disagreement_score":0.0011279453,"about_ca_system_score_codex":0.00015874712,"about_ca_system_score_gemma":0.00011721707,"threshold_uncertainty_score":0.0037733912},"labels":[],"label_agreement":null},{"id":"W2899765814","doi":"10.1111/hic3.12507","title":"Plagues, climate change, and the end of an empire: A response to Kyle Harper's <i>The Fate of Rome</i> (3): Disease, agency, and collapse","year":2018,"lang":"en","type":"article","venue":"History Compass","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trent University","funders":"","keywords":"Agency (philosophy); Narrative; Rhetorical question; History; Empire; Plague (disease); Environmental ethics; Sociology; Psychology; Philosophy; Social science; Art; Archaeology; Literature","score_opus":0.02622931144505443,"score_gpt":0.2761444521707024,"score_spread":0.24991514072564797,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2899765814","genre_codex":"review","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.017236808,0.52936625,0.0008617227,0.4281448,0.011021534,0.000020826918,0.000041211,0.000019048222,0.013287735],"genre_scores_gemma":[0.37077922,0.48050836,0.0008633174,0.10994826,0.017132688,0.00006574286,0.00005567963,0.00007700404,0.020569837],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99796695,0.0013999601,0.000079362806,0.00014692024,0.00022823652,0.00017855968],"domain_scores_gemma":[0.9930743,0.0053455257,0.00062212767,0.00012377714,0.0006245373,0.00020964077],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0042708395,0.00048707624,0.00057862373,0.0011463052,0.0032915026,0.007591558,0.00071765797,0.00494539,0.0022258796],"category_scores_gemma":[0.0052598943,0.00025569176,0.00033797525,0.0014275312,0.009129928,0.00466823,0.0031140223,0.005741154,0.0003122182],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021918096,0.00007048565,0.0054018847,0.004431907,0.00017099663,0.004720873,0.16403697,0.00089221,0.0018131385,0.22931056,0.4561542,0.13277763],"study_design_scores_gemma":[0.000009894944,0.00007003954,0.0036755921,0.0033342582,0.000031354968,0.00069819164,0.0477684,0.00012439094,0.00046817478,0.018933667,0.92484665,0.000039295068],"about_ca_topic_score_codex":0.007559405,"about_ca_topic_score_gemma":0.021851277,"teacher_disagreement_score":0.007591558,"about_ca_system_score_codex":0.0044058883,"about_ca_system_score_gemma":0.003141066,"threshold_uncertainty_score":0.031967103},"labels":[],"label_agreement":null},{"id":"W2900099073","doi":"10.1007/13836_2018_52","title":"Ancient Pathogens Through Human History: A Paleogenomic Perspective","year":2018,"lang":"en","type":"book-chapter","venue":"Population genomics","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Ancient DNA; Biology; Evolutionary biology; Pandemic; Human pathogen; Genome; Geography; History; Disease; Genetics; Infectious disease (medical specialty); Coronavirus disease 2019 (COVID-19); Gene; Medicine","score_opus":0.03904518584209661,"score_gpt":0.29191767377120764,"score_spread":0.25287248792911105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900099073","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011556688,0.75685525,0.017331483,0.030062411,0.0037106988,0.000023059585,0.00042567277,0.00013126538,0.17990343],"genre_scores_gemma":[0.133719,0.72114533,0.013444657,0.009312722,0.0049879793,0.00006037231,0.00048350226,0.00020122339,0.11664529],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"observational","domain_scores_codex":[0.99989915,0.00002843156,0.000004448445,0.0000314911,0.00002406892,0.000012393768],"domain_scores_gemma":[0.9998115,0.0001225193,0.00001226979,0.000012457926,0.000024374505,0.000016834527],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052194664,0.00047635578,0.00040739035,0.0010720913,0.00067650306,0.0023144854,0.00060143083,0.0011736556,0.010071929],"category_scores_gemma":[0.00073009724,0.0002093275,0.00015380536,0.00171301,0.0033160723,0.0030803282,0.0010271177,0.0017122917,0.0013263487],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010108366,0.00004365019,0.0011176373,0.0010628114,0.000046122437,0.00035803756,0.0034852484,0.001159784,0.0036887182,0.59849787,0.033628073,0.35681102],"study_design_scores_gemma":[0.000008243385,0.000035550634,0.0027298825,0.0006994557,0.000021940954,0.00059496803,0.0007943241,0.0003149277,0.00063713867,0.22069237,0.773451,0.00002025197],"about_ca_topic_score_codex":0.001493298,"about_ca_topic_score_gemma":0.0031383573,"teacher_disagreement_score":0.010071929,"about_ca_system_score_codex":0.0011649472,"about_ca_system_score_gemma":0.00064077886,"threshold_uncertainty_score":0.03369397},"labels":[],"label_agreement":null},{"id":"W2900107538","doi":"10.1111/hic3.12506","title":"Plagues, climate change, and the end of an empire. <scp>A</scp> response to <scp> Kyle Harper's <i>The Fate of Rome</i> (2) </scp> : <scp>P</scp> lagues and a crisis of empire","year":2018,"lang":"en","type":"article","venue":"History Compass","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trent University","funders":"","keywords":"Plague (disease); History; Narrative; Outbreak; Roman Empire; Theme (computing); Empire; Psychology; Ancient history; Classics; Art; Medicine; Literature; Computer science; Virology","score_opus":0.026769160134141805,"score_gpt":0.274405367203207,"score_spread":0.24763620706906522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900107538","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.028591143,0.8075739,0.00035599116,0.119293034,0.004317726,0.000010177625,0.000042787782,0.000011302009,0.03980386],"genre_scores_gemma":[0.4536851,0.4861912,0.00028818086,0.025336286,0.00828595,0.000026706144,0.000048592457,0.000029145369,0.026108785],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99956006,0.00025303278,0.00001572976,0.000037133108,0.00006631508,0.00006760974],"domain_scores_gemma":[0.99918,0.0005037926,0.00012369137,0.000034079,0.00010623055,0.000052178395],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010700572,0.00031322025,0.00029028178,0.00075589813,0.0020519618,0.0035409974,0.00029964547,0.0019175676,0.0011968714],"category_scores_gemma":[0.001300013,0.00014827144,0.00017950179,0.0010463514,0.0071267975,0.0018684079,0.0012111189,0.002604331,0.00016269513],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022884436,0.000062393534,0.006249948,0.0026409386,0.00013419239,0.004089648,0.08198135,0.0013129608,0.0016214858,0.46657798,0.28385642,0.15124394],"study_design_scores_gemma":[0.0000057863417,0.00004509243,0.008666271,0.0016283651,0.000012161187,0.0007099883,0.012360671,0.00008334601,0.00043911824,0.017980386,0.9580489,0.00001996306],"about_ca_topic_score_codex":0.010782197,"about_ca_topic_score_gemma":0.021546168,"teacher_disagreement_score":0.010782197,"about_ca_system_score_codex":0.0028299866,"about_ca_system_score_gemma":0.001716944,"threshold_uncertainty_score":0.021438837},"labels":[],"label_agreement":null},{"id":"W2901183100","doi":"10.5114/ada.2018.78880","title":"Pemphigus foliaceus complicated by sepsis of the aetiology of Yersinia enterocolitica after eating cheesecake","year":2019,"lang":"en","type":"article","venue":"Advances in Dermatology and Allergology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pemphigus foliaceus; Medicine; Yersinia enterocolitica; Dermatology; Etiology; Immunology; Pathology; Biology","score_opus":0.0028224456391351144,"score_gpt":0.2519837241267052,"score_spread":0.2491612784875701,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901183100","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.83931965,0.06762935,0.002845403,0.020834494,0.003294351,0.00054540683,0.0010138605,0.00043270175,0.06408477],"genre_scores_gemma":[0.96527505,0.016929474,0.0008640715,0.0023131263,0.0010978628,0.000050768027,0.0005906392,0.000043057185,0.012835912],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9996462,0.000056123314,0.00003964087,0.000056411798,0.000116703384,0.00008497675],"domain_scores_gemma":[0.9994398,0.000120720055,0.00014880305,0.000033635857,0.000094196366,0.00016283886],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047732735,0.00049028243,0.00055224466,0.0009273859,0.00085415633,0.0008165035,0.0002455443,0.0007649088,0.005557022],"category_scores_gemma":[0.0026351144,0.000241523,0.00050833577,0.0006743686,0.00025585343,0.0008899867,0.0005216438,0.001148512,0.0012470655],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012752106,0.00024799907,0.09666362,0.0006855717,0.00010481141,0.8017203,0.0010992123,0.00011669678,0.0056189834,0.00052457815,0.03347983,0.058463246],"study_design_scores_gemma":[0.00011570035,0.0007496043,0.23806626,0.0010275232,0.00022295617,0.70819163,0.0016970648,0.0005722672,0.0023922217,0.000663796,0.046230454,0.000070434486],"about_ca_topic_score_codex":0.0032118736,"about_ca_topic_score_gemma":0.002008852,"teacher_disagreement_score":0.005557022,"about_ca_system_score_codex":0.0005457987,"about_ca_system_score_gemma":0.0003932733,"threshold_uncertainty_score":0.018590093},"labels":[],"label_agreement":null},{"id":"W2903143543","doi":"10.1101/481242","title":"A phylogeography of the second plague pandemic revealed through the analysis of historical <i>Y. pestis</i> genomes","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Max-Planck-Gesellschaft; Queen's University; University of Bern","keywords":"Yersinia pestis; Plague (disease); Pandemic; Lineage (genetic); Biology; Outbreak; Genome; Evolutionary biology; Phylogeography; Extant taxon; Ancient DNA; Clade; Infectious disease (medical specialty); Virology; Phylogenetics; Virulence; Geography; Genealogy; Genetics; History; Gene; Demography; Coronavirus disease 2019 (COVID-19); Disease; Archaeology; Medicine","score_opus":0.01464104109893994,"score_gpt":0.24216479316995224,"score_spread":0.2275237520710123,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2903143543","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954976,0.0006867075,0.0007137472,0.000055173652,0.0000063095645,0.0000052482014,0.0018489772,0.000025155046,0.0011611393],"genre_scores_gemma":[0.9912388,0.00068757014,0.0016655854,0.00004496913,0.000014527465,0.000010400119,0.0058255494,0.000025432482,0.00048702426],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99988985,0.000014268653,0.000007135833,0.00004585169,0.00001347311,0.000029376999],"domain_scores_gemma":[0.99978834,0.000047532907,0.00008023921,0.000021745016,0.000028872706,0.000033321074],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028475674,0.00020777313,0.0002627301,0.0013116504,0.00039662456,0.00068739994,0.00012345212,0.00031302468,0.0012402713],"category_scores_gemma":[0.0004555727,0.00016040444,0.00028165625,0.0011594263,0.00027379816,0.0002837505,0.00065213034,0.00040636677,0.00029100527],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001049558,0.00007367363,0.5937202,0.00048169727,0.0005347442,0.0015561891,0.00395081,0.0030380182,0.34667608,0.002491374,0.0017223867,0.044705354],"study_design_scores_gemma":[0.000015838665,0.00006244915,0.9815006,0.00007456913,0.00008834536,0.00095717306,0.0006042067,0.001388619,0.003721943,0.00036995474,0.011198706,0.000017559429],"about_ca_topic_score_codex":0.0019605518,"about_ca_topic_score_gemma":0.0026204288,"teacher_disagreement_score":0.0019605518,"about_ca_system_score_codex":0.00022343597,"about_ca_system_score_gemma":0.00023169261,"threshold_uncertainty_score":0.004149139},"labels":[],"label_agreement":null},{"id":"W2904468480","doi":"10.1111/zph.12546","title":"Methicillin‐resistant <i>Staphylococcus aureus</i> in urban Norway rat (<i>Rattus norvegicus</i>) populations: Epidemiology and the impacts of kill‐trapping","year":2018,"lang":"en","type":"article","venue":"Zoonoses and Public Health","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Ministry of Agriculture; Government of British Columbia; BC Centre for Disease Control; University of Saskatchewan; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; University of British Columbia; Northwest Scientific Association","keywords":"Carriage; Biology; Epidemiology; Methicillin-resistant Staphylococcus aureus; Transmission (telecommunications); Feces; Staphylococcus aureus; Veterinary medicine; Ecology; House mice; Staphylococcal infections; Environmental health; Zoology; Medicine; Bacteria; Pathology","score_opus":0.05568168283701107,"score_gpt":0.3490227499800887,"score_spread":0.2933410671430776,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2904468480","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9997172,0.00003798024,0.000067315006,0.0000041908934,0.0000010083287,0.0000043856858,0.00003123049,0.0000018773262,0.00013495465],"genre_scores_gemma":[0.9992943,0.000071926705,0.0002343825,0.000010682174,0.0000015907767,0.000010355612,0.00010982574,0.000001344297,0.0002656563],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99973875,0.000038798556,0.000014267449,0.00010152468,0.000042212185,0.00006437848],"domain_scores_gemma":[0.9996445,0.000030950472,0.00017718197,0.00001967962,0.000054814867,0.00007279374],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023990338,0.00023427606,0.00014982154,0.0005060471,0.00021127812,0.0003715963,0.00021953454,0.0002175579,0.0005106457],"category_scores_gemma":[0.00023830713,0.00014750642,0.0001807368,0.00014697236,0.00042469145,0.00024456557,0.00019662778,0.00022744724,0.00006951938],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007316856,0.00054831407,0.8237335,0.000055956916,0.00007302245,0.00051074557,0.00091872236,0.00023205866,0.16485557,0.00010766175,0.000078504396,0.008154288],"study_design_scores_gemma":[0.0000062393106,0.0012190379,0.9900641,0.000009604218,0.000028897533,0.00033313155,0.0008366114,0.00024821673,0.007029582,0.00002556871,0.00018850928,0.000010538627],"about_ca_topic_score_codex":0.013985848,"about_ca_topic_score_gemma":0.039243422,"teacher_disagreement_score":0.013985848,"about_ca_system_score_codex":0.0004099671,"about_ca_system_score_gemma":0.00032320316,"threshold_uncertainty_score":0.027808845},"labels":[],"label_agreement":null},{"id":"W2906790006","doi":"10.1201/9781351077804-9","title":"Yersinia Enterocolitica Gastroenteritis in Children and Their Families","year":2018,"lang":"en","type":"book-chapter","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Yersinia enterocolitica; Yersinia; Microbiology; Medicine; Biology; Bacteria; Genetics","score_opus":0.006541139849379912,"score_gpt":0.22935400225065306,"score_spread":0.22281286240127315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2906790006","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.018794095,0.5125589,0.0010482682,0.022611607,0.0058520986,0.00007430369,0.00066616543,0.00020838328,0.4381862],"genre_scores_gemma":[0.07620337,0.49714148,0.0026836318,0.006544345,0.0037877988,0.00013561809,0.00067776715,0.000079046506,0.41274694],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9999366,0.000016766355,0.0000035381547,0.0000074055656,0.000022117898,0.000013523494],"domain_scores_gemma":[0.9999367,0.000025148938,0.0000056728973,0.000001927336,0.000011128931,0.000019422365],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018807553,0.0003770636,0.00030957785,0.00047936875,0.0006177094,0.0006586259,0.00028015595,0.00047902387,0.012428782],"category_scores_gemma":[0.00041315204,0.00015217168,0.00011483434,0.00054517115,0.00030650274,0.00070442713,0.0006568982,0.00079627073,0.0031464125],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050762133,0.0000833296,0.004270043,0.00043264613,0.000007866584,0.0012467594,0.0024528902,0.00022379306,0.00044573,0.010790991,0.543935,0.43606025],"study_design_scores_gemma":[0.000005044,0.000046079494,0.007041522,0.0005677277,0.000004321803,0.0017864123,0.0009631698,0.00003815733,0.00006760308,0.002332174,0.9871414,0.0000063837883],"about_ca_topic_score_codex":0.005471433,"about_ca_topic_score_gemma":0.012757806,"teacher_disagreement_score":0.012428782,"about_ca_system_score_codex":0.0006799424,"about_ca_system_score_gemma":0.0006249624,"threshold_uncertainty_score":0.04157847},"labels":[],"label_agreement":null},{"id":"W2906903931","doi":"10.1201/9781351077804-14","title":"Zoonotic Yersinia Enterocolitica Infection: Host Range, Clinical Manifestations, and Transmission Between Animals and Man","year":2018,"lang":"en","type":"book-chapter","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Yersinia enterocolitica; Transmission (telecommunications); Host (biology); Yersinia; Biology; Microbiology; Range (aeronautics); Virology; Computer science; Ecology; Telecommunications; Bacteria; Genetics; Engineering","score_opus":0.03591690069859959,"score_gpt":0.3369454145386625,"score_spread":0.3010285138400629,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2906903931","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.006263317,0.7327304,0.0030737808,0.0051965443,0.00438963,0.000065382286,0.0005510518,0.0003196548,0.2474102],"genre_scores_gemma":[0.0208673,0.42263326,0.00482531,0.0033118105,0.003492732,0.00007222533,0.00077406,0.00018013499,0.54384315],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999416,0.000009751969,0.0000038046683,0.000011970476,0.00002622226,0.00000661654],"domain_scores_gemma":[0.99995327,0.00002114797,0.0000061866285,0.0000020793384,0.000009453601,0.00000791189],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000101076716,0.00051899557,0.00037165676,0.0005387271,0.00023273341,0.000855209,0.00030165853,0.00047996244,0.016188929],"category_scores_gemma":[0.0001486307,0.0001541166,0.00014873859,0.0006623353,0.0002612917,0.0010984568,0.00046974243,0.00065672107,0.0069481763],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010047532,0.000109675006,0.0010175413,0.0010871731,0.000017221248,0.00066778617,0.0008680033,0.00029408187,0.0058930884,0.020440923,0.3299272,0.63957685],"study_design_scores_gemma":[0.0000032288888,0.000051643005,0.002151244,0.00035477526,0.0000042494216,0.0015865881,0.00010672551,0.000057184803,0.0002604478,0.0031365904,0.9922814,0.0000059466447],"about_ca_topic_score_codex":0.0005972318,"about_ca_topic_score_gemma":0.0014732729,"teacher_disagreement_score":0.016188929,"about_ca_system_score_codex":0.00034148383,"about_ca_system_score_gemma":0.00023894417,"threshold_uncertainty_score":0.054157317},"labels":[],"label_agreement":null},{"id":"W2907345795","doi":"10.1201/9781351077804-17","title":"Yersinia Enterocolitica Infections in Canada 1966 to August 1978","year":2018,"lang":"en","type":"book-chapter","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Yersinia enterocolitica; Microbiology; Yersinia; Medicine; Biology; Bacteria; Genetics","score_opus":0.011856550395274699,"score_gpt":0.25494302739510255,"score_spread":0.24308647699982786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2907345795","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.017778488,0.34354872,0.0007712337,0.012286015,0.007243581,0.00012361056,0.0114896,0.00026486532,0.60649395],"genre_scores_gemma":[0.051496804,0.25050962,0.00080778,0.0016789397,0.0012296513,0.000030185327,0.0045723654,0.0000796444,0.68959504],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9998847,0.0000030160973,0.000003910907,0.000013887046,0.00006198201,0.000032492964],"domain_scores_gemma":[0.99981624,0.000012952278,0.000010491655,0.0000035476144,0.000114794006,0.00004201816],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000110723784,0.0005722272,0.00018162475,0.002517992,0.0016353001,0.00083513284,0.00046946495,0.00037543752,0.017393658],"category_scores_gemma":[0.0003633794,0.00022621406,0.0001401141,0.0030849443,0.00052966067,0.0005034613,0.00047957554,0.0005242989,0.003920374],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008079273,0.000028563789,0.004822478,0.0006669706,0.000010377094,0.00081745995,0.0016281236,0.00046288213,0.0010994714,0.013376477,0.62288356,0.35412276],"study_design_scores_gemma":[0.0000022744605,0.000006274791,0.0068811863,0.00021170785,0.000003499208,0.00022313048,0.00013555572,0.000030946518,0.0001543332,0.00020428462,0.9921415,0.000005236977],"about_ca_topic_score_codex":0.94373167,"about_ca_topic_score_gemma":0.9793777,"teacher_disagreement_score":0.056268334,"about_ca_system_score_codex":0.022151029,"about_ca_system_score_gemma":0.01395516,"threshold_uncertainty_score":0.16071773},"labels":[],"label_agreement":null},{"id":"W2912925087","doi":"10.1016/j.vacune.2018.12.002","title":"The Military Institute of Hygiene and the creation of the laboratory of rabies vaccine","year":2018,"lang":"en","type":"article","venue":"Vacunas (English Edition)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Rabies; Quarter (Canadian coin); Library science; Medicine; Political science; Humanities; Geography; Virology; Art; Archaeology; Computer science","score_opus":0.0049338009913868245,"score_gpt":0.23997095844025668,"score_spread":0.23503715744886985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912925087","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.006461417,0.35140026,0.014778361,0.15063345,0.10808942,0.0003855945,0.0036126676,0.0010349379,0.36360386],"genre_scores_gemma":[0.040617358,0.16021392,0.029483676,0.016485976,0.015253982,0.00043393607,0.0030093698,0.00039655773,0.73410517],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9989052,0.0002975279,0.00010689453,0.00014692983,0.00038626144,0.00015718564],"domain_scores_gemma":[0.99856037,0.00021059594,0.00011927471,0.00017009002,0.00068706623,0.00025255562],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0029587622,0.0008981404,0.0005045396,0.0016012486,0.0011083183,0.002124956,0.0008453388,0.0018673029,0.026233625],"category_scores_gemma":[0.0019152425,0.00039800853,0.0004588512,0.0010244957,0.0015645713,0.00228562,0.0018472326,0.0036615457,0.016133955],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021975722,0.00007941632,0.0013178142,0.0006725975,0.000016723294,0.0002443042,0.00058692135,0.00015851615,0.0073163914,0.10093414,0.5009777,0.38747576],"study_design_scores_gemma":[0.000005650791,0.000023722254,0.000683815,0.000076484044,0.0000029135642,0.00008309195,0.0000404318,0.00001656911,0.00075358833,0.0013356252,0.99697244,0.0000055981714],"about_ca_topic_score_codex":0.006133736,"about_ca_topic_score_gemma":0.007667873,"teacher_disagreement_score":0.9988917,"about_ca_system_score_codex":0.0024479306,"about_ca_system_score_gemma":0.0063026263,"threshold_uncertainty_score":0.08776015},"labels":[],"label_agreement":null},{"id":"W2913247771","doi":"10.26818/9780814213902","title":"Death and the Pearl Maiden: Plague, Poetry, England","year":2019,"lang":"en","type":"book","venue":"The Ohio State University Press eBooks","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Simon Fraser University","keywords":"Plague (disease); Pearl; Poetry; History; Art; Ancient history; Literature; Geography; Archaeology","score_opus":0.01373244408319824,"score_gpt":0.21965621233624313,"score_spread":0.2059237682530449,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2913247771","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002227251,0.5596528,0.00037075282,0.048472237,0.016456341,0.000027788514,0.00018826038,0.0000743538,0.3725302],"genre_scores_gemma":[0.03554151,0.08769659,0.00036282744,0.014098298,0.0050490065,0.000031016243,0.000111199755,0.00007878712,0.8570307],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99971884,0.00011674805,0.000013510869,0.000031829262,0.000084301086,0.000034802764],"domain_scores_gemma":[0.9997863,0.00010647103,0.000021261578,0.000013000028,0.000039823884,0.00003319116],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044142164,0.00072081713,0.00037722828,0.0009954358,0.0037600084,0.0033221547,0.00045165385,0.0011509357,0.023661675],"category_scores_gemma":[0.0012026104,0.00025716407,0.00014971558,0.001047643,0.0038262843,0.004093828,0.0016381321,0.0022470355,0.0071003106],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035076573,0.000013351022,0.00022771354,0.00017936842,0.0000023295468,0.00020356356,0.009346771,0.00003680143,0.00010412578,0.07877595,0.86277723,0.048297655],"study_design_scores_gemma":[0.0000012278981,0.0000061420615,0.00028559592,0.00014430968,6.7066924e-7,0.00015367255,0.0018043565,0.000007346544,0.000014841543,0.002970137,0.9946091,0.0000025216996],"about_ca_topic_score_codex":0.014649668,"about_ca_topic_score_gemma":0.054391455,"teacher_disagreement_score":0.023661675,"about_ca_system_score_codex":0.002346644,"about_ca_system_score_gemma":0.0011328798,"threshold_uncertainty_score":0.07915616},"labels":[],"label_agreement":null},{"id":"W2914591363","doi":"10.3897/zookeys.819.25458","title":"Siphonaptera of Canada","year":2019,"lang":"en","type":"review","venue":"ZooKeys","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba","funders":"","keywords":"Biology; Geography; Ecology; Zoology","score_opus":0.036270270211249254,"score_gpt":0.32571444494938295,"score_spread":0.2894441747381337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2914591363","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00054996496,0.9928629,0.00007161142,0.0001661819,0.00012422472,0.000008056638,0.00013852611,0.000012985103,0.006065539],"genre_scores_gemma":[0.0058783856,0.9888326,0.0002153217,0.00018114138,0.000060985592,0.000006772636,0.000249405,0.0000037846576,0.004571637],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998641,0.0000053340896,0.000013291301,0.000029717758,0.00006270633,0.000024791738],"domain_scores_gemma":[0.99981636,0.00002825899,0.000022912016,0.0000046190703,0.00009322849,0.000034744175],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018680803,0.00091575255,0.00077601266,0.0038473655,0.0009924765,0.0012111109,0.0007930483,0.000574924,0.0064505525],"category_scores_gemma":[0.00033849792,0.00024352639,0.00023889335,0.003103005,0.00060292735,0.00077875884,0.00043630594,0.00082208624,0.0017809828],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005631414,0.000019907138,0.0006202244,0.008928689,0.000032954114,0.00025481838,0.00017742225,0.00024069185,0.0019672296,0.0019437507,0.021065239,0.9646927],"study_design_scores_gemma":[0.0000048239694,0.00003114192,0.005579099,0.0025560763,0.00005757763,0.0007287999,0.000106905754,0.000039589962,0.00035715732,0.0004696379,0.9900547,0.000014449091],"about_ca_topic_score_codex":0.37991902,"about_ca_topic_score_gemma":0.55622,"teacher_disagreement_score":0.62008095,"about_ca_system_score_codex":0.0033563997,"about_ca_system_score_gemma":0.007960402,"threshold_uncertainty_score":0.7554153},"labels":[],"label_agreement":null},{"id":"W2921238050","doi":"10.1111/ele.13250","title":"Endemic infection can shape exposure to novel pathogens: Pathogen co‐occurrence networks in the Serengeti lions","year":2019,"lang":"en","type":"letter","venue":"Ecology Letters","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"University of Minnesota; U.S. Department of Agriculture; National Science Foundation","keywords":"Biology; Pathogen; Ecology; Microbiology","score_opus":0.018519293733748114,"score_gpt":0.2719151154121234,"score_spread":0.25339582167837527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2921238050","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98679835,0.0007146911,0.0014120094,0.0067664688,0.00006277204,0.000007857119,0.00028107993,0.00003541946,0.0039212364],"genre_scores_gemma":[0.9970462,0.00041136742,0.00037966506,0.0009935718,0.00007364921,0.00001138184,0.00011376083,0.0000043084237,0.00096615124],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998729,0.000030825027,0.000004722972,0.000047151072,0.000013878978,0.000030470092],"domain_scores_gemma":[0.9994011,0.00021684117,0.00018521055,0.000039375653,0.000059094018,0.00009832622],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002539527,0.000107519314,0.00012001099,0.00037372686,0.0004872274,0.00080858276,0.00025549193,0.00091688614,0.0012947121],"category_scores_gemma":[0.0013451389,0.000098219025,0.00008260375,0.00039658995,0.0005241383,0.00076738413,0.0004309351,0.0006382889,0.00035538236],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009124219,0.00008648261,0.8400493,0.00016762211,0.000120087076,0.003572501,0.003339535,0.0037474192,0.051878225,0.004624924,0.012870299,0.07863116],"study_design_scores_gemma":[0.000025754296,0.0001840795,0.9394281,0.00007473333,0.000054052893,0.0036756722,0.004079526,0.016267959,0.0029841624,0.011516387,0.02165689,0.00005266166],"about_ca_topic_score_codex":0.006539826,"about_ca_topic_score_gemma":0.013416276,"teacher_disagreement_score":0.006539826,"about_ca_system_score_codex":0.001069992,"about_ca_system_score_gemma":0.00019587089,"threshold_uncertainty_score":0.013003528},"labels":[],"label_agreement":null},{"id":"W2933926268","doi":"10.31210/visnyk2019.01.25","title":"Епізоотологічні особливості ктеноцефальозу собак в умовах міста Полтави","year":2019,"lang":"uk","type":"article","venue":"Вісник Полтавської державної аграрної академії","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Stomoxys; Biology; Epizootic; Ctenocephalides; Veterinary medicine; Zoology; Felis; Infestation; Flea; Medicine; Muscidae; CATS; Virology","score_opus":0.005248103627707004,"score_gpt":0.2578451158564349,"score_spread":0.2525970122287279,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2933926268","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.005463061,0.0034218861,0.021089327,0.03707515,0.0032482287,0.00012967995,0.001041137,0.00058659824,0.9279449],"genre_scores_gemma":[0.17307931,0.008147841,0.05532026,0.013513732,0.001632206,0.00038722917,0.0010313035,0.0011726117,0.7457155],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"observational","domain_scores_codex":[0.9977774,0.0005389534,0.00014020494,0.000392381,0.000923047,0.00022803784],"domain_scores_gemma":[0.99691004,0.0009177349,0.0002038187,0.00042325194,0.0012778474,0.00026730567],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018573481,0.00072746404,0.00032991392,0.0014874098,0.0048625185,0.0074032904,0.0012349066,0.0032442438,0.09444401],"category_scores_gemma":[0.0050717555,0.0005396252,0.0006177883,0.0013430491,0.005735816,0.0067641838,0.003116039,0.0027939635,0.028877618],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000121521494,0.00003724273,0.0021072028,0.00050542195,0.000020049907,0.0006761887,0.0063859015,0.00043582855,0.0028756866,0.62616587,0.22702567,0.13364345],"study_design_scores_gemma":[0.0000066554253,0.000015352678,0.0011831473,0.00018190221,0.000010610175,0.00033381244,0.0022725768,0.0002021794,0.0016393822,0.03899822,0.9551319,0.000024276096],"about_ca_topic_score_codex":0.024396626,"about_ca_topic_score_gemma":0.046142064,"teacher_disagreement_score":0.09444401,"about_ca_system_score_codex":0.005083292,"about_ca_system_score_gemma":0.0048128944,"threshold_uncertainty_score":0.3159467},"labels":[],"label_agreement":null},{"id":"W2939650876","doi":"10.3138/cbmh.280-082018","title":"The Greater Good: Agency and Inoculation in the British Army, 1914–18","year":2019,"lang":"en","type":"article","venue":"Canadian Journal of Health History","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Autonomy; Agency (philosophy); Typhoid fever; Political science; Law; Authoritarianism; Medicine; Sociology; Virology; Politics; Democracy; Social science","score_opus":0.021525058030599977,"score_gpt":0.26186048444735505,"score_spread":0.24033542641675507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2939650876","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46475664,0.041361455,0.0004538234,0.108045205,0.002508233,0.000046313537,0.00019286858,0.000028915354,0.38260654],"genre_scores_gemma":[0.9339787,0.0057634856,0.000118382755,0.0039843894,0.00024383474,0.000011299302,0.000038758786,0.000012912505,0.055848245],"study_design_codex":"qualitative","study_design_gemma":"qualitative","domain_scores_codex":[0.997317,0.001038278,0.0000535465,0.00011666866,0.0003052613,0.0011691867],"domain_scores_gemma":[0.99847275,0.00035293552,0.0001900414,0.00005394853,0.0002551523,0.000675077],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020374865,0.00020536217,0.00025659974,0.00086841785,0.016497698,0.00422409,0.00041771017,0.0018378227,0.0063295094],"category_scores_gemma":[0.0025059697,0.00031168433,0.00015302625,0.0012185094,0.016881375,0.0017921235,0.0031741837,0.004668288,0.00047137312],"study_design_candidate":"qualitative","study_design_consensus":"qualitative","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001948183,0.00011235428,0.020724708,0.00011494752,0.000022051536,0.0015802655,0.6467958,0.00008945056,0.0004800732,0.16619202,0.08214383,0.08154962],"study_design_scores_gemma":[0.000013759075,0.00008779349,0.06456349,0.0002387911,0.0000062420318,0.000426936,0.13259614,0.000038484974,0.00010927878,0.0042848894,0.7975878,0.00004643555],"about_ca_topic_score_codex":0.60432315,"about_ca_topic_score_gemma":0.81956303,"teacher_disagreement_score":0.60432315,"about_ca_system_score_codex":0.025654823,"about_ca_system_score_gemma":0.010847334,"threshold_uncertainty_score":0.79601413},"labels":[],"label_agreement":null},{"id":"W2941036661","doi":"10.3389/fvets.2019.00207","title":"Marmots and Yersinia pestis Strains in Two Plague Endemic Areas of Tien Shan Mountains","year":2019,"lang":"en","type":"article","venue":"Frontiers in Veterinary Science","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"International Science and Technology Center; Government of Canada","keywords":"Plague (disease); Yersinia pestis; Biology; Yersiniosis; Veterinary medicine; Flea; Zoology; Geography; Virulence; Enterobacteriaceae; Escherichia coli; Medicine","score_opus":0.012221865873477043,"score_gpt":0.30096521629860584,"score_spread":0.2887433504251288,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2941036661","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99991775,0.000016459548,0.000005779575,0.000001755869,3.3248023e-7,0.0000011446773,0.000011755157,1.9956339e-7,0.000044805565],"genre_scores_gemma":[0.9997527,0.00003244375,0.00003572725,0.000004650015,0.0000014807135,0.000004450127,0.00011335401,2.5359336e-7,0.000054951714],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99986255,0.000031732452,0.0000138548585,0.000029347411,0.000018412491,0.000044163917],"domain_scores_gemma":[0.9998184,0.000020083511,0.000080370366,0.000012056698,0.00002108149,0.000048100756],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020607184,0.00025047388,0.00019604652,0.00072338595,0.00060004665,0.00033371596,0.000184131,0.00021642867,0.0004536147],"category_scores_gemma":[0.00026615796,0.00015773362,0.0001579213,0.00055648334,0.0003004324,0.00019817513,0.000421279,0.00013686919,0.00004967875],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006767381,0.000024701025,0.9953054,0.000009757094,0.000017709044,0.00030788616,0.0008991323,0.000036215166,0.002081049,0.000012763242,0.000015829324,0.0012219107],"study_design_scores_gemma":[0.00000161559,0.00002813162,0.9987948,0.000001975468,0.0000058531577,0.00013230831,0.0008817531,0.000036992213,0.00006381991,0.0000035510611,0.000048176462,9.2457736e-7],"about_ca_topic_score_codex":0.013046738,"about_ca_topic_score_gemma":0.042775173,"teacher_disagreement_score":0.013046738,"about_ca_system_score_codex":0.00038080063,"about_ca_system_score_gemma":0.00033050892,"threshold_uncertainty_score":0.02594161},"labels":[],"label_agreement":null},{"id":"W2942752441","doi":"","title":"Travelling bugs value Romanian leu over dollars","year":2013,"lang":"en","type":"article","venue":"The New Scientist","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Liberian dollar; Currency; Rupee; Bacteria; Romanian; Value (mathematics); Medicine; Business; Toxicology; Biology; Finance; Economics; Monetary economics","score_opus":0.008933274964674194,"score_gpt":0.2633931947848978,"score_spread":0.2544599198202236,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2942752441","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12236412,0.027498703,0.0042094947,0.14558631,0.020056423,0.00010250468,0.0010962577,0.0008998275,0.67818636],"genre_scores_gemma":[0.39915505,0.015479478,0.0085288165,0.032707807,0.00258922,0.00007983053,0.000722821,0.00093137944,0.53980565],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99897695,0.0002977761,0.00004651392,0.00009876981,0.0003637704,0.00021614],"domain_scores_gemma":[0.9984561,0.00029771822,0.00027196007,0.0001322705,0.00053495425,0.00030698022],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012909914,0.00073776033,0.00039642854,0.0010416509,0.0030651707,0.0050381618,0.00031418836,0.0010478068,0.03708163],"category_scores_gemma":[0.0064014154,0.0003045523,0.0004441064,0.0012399908,0.0020012122,0.0025795053,0.0021650635,0.002375627,0.009789565],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054467714,0.00010697731,0.0134080425,0.00038842158,0.00008679355,0.0015857593,0.007421064,0.00029227667,0.0062124105,0.069437295,0.6722467,0.22826955],"study_design_scores_gemma":[0.000013788562,0.00008553054,0.007611526,0.00015998314,0.000015243345,0.00076536054,0.004687358,0.00012704176,0.0013351275,0.002132226,0.9830294,0.00003741149],"about_ca_topic_score_codex":0.0049021803,"about_ca_topic_score_gemma":0.007931234,"teacher_disagreement_score":0.03708163,"about_ca_system_score_codex":0.0022458727,"about_ca_system_score_gemma":0.0010153557,"threshold_uncertainty_score":0.12405038},"labels":[],"label_agreement":null},{"id":"W2943930128","doi":"10.15353/cjo.74.577","title":"Cas atypique d’uvéite associée à l’antigène HLA-B27 avec hypopyon et atteinte du segment postérieur","year":2012,"lang":"fr","type":"article","venue":"Canadian journal of optometry/CJO. Canadian journal of optometry","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Syracuse University","keywords":"Medicine; Hypopyon; Ophthalmology; Visual acuity","score_opus":0.014712030243923759,"score_gpt":0.3250054019850741,"score_spread":0.31029337174115035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2943930128","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92247444,0.020568743,0.0070311287,0.0017505828,0.00031882792,0.00023933663,0.00067778013,0.0004887839,0.046450406],"genre_scores_gemma":[0.99016654,0.0031194743,0.0015549369,0.0004177914,0.00012450608,0.000024341345,0.0002876155,0.000035771547,0.0042689038],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9993474,0.0000881687,0.000062949584,0.00014918017,0.00019550935,0.00015681957],"domain_scores_gemma":[0.9985709,0.0003468399,0.0005096585,0.00019012426,0.00017592443,0.00020656048],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029837064,0.00066021434,0.0005216264,0.0021141204,0.0010114276,0.0009289153,0.0003495189,0.00097459566,0.0057184594],"category_scores_gemma":[0.002774221,0.00049951766,0.00050900487,0.0016234191,0.00093497324,0.00080269034,0.0006927305,0.0009535658,0.0010502072],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000650282,0.00021739714,0.33344334,0.00057836063,0.00017155072,0.56243396,0.0014192739,0.0005773274,0.04376107,0.0020846324,0.0045431713,0.050119624],"study_design_scores_gemma":[0.00004246558,0.00019772706,0.096639104,0.00013043037,0.0000788825,0.88152176,0.000491523,0.0006028526,0.0044856207,0.00068538915,0.015078957,0.000045190623],"about_ca_topic_score_codex":0.00880065,"about_ca_topic_score_gemma":0.0067514936,"teacher_disagreement_score":0.00880065,"about_ca_system_score_codex":0.0006036119,"about_ca_system_score_gemma":0.00073466107,"threshold_uncertainty_score":0.01913017},"labels":[],"label_agreement":null},{"id":"W2944623510","doi":"10.36829/63cts.v3i2.329","title":"Incidencia de accidente ofídico en Guatemala en años recientes","year":2017,"lang":"es","type":"article","venue":"Ciencia Tecnologí­a y Salud","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lockheed Martin (Canada)","funders":"","keywords":"Political science; Humanities; Geography; Art","score_opus":0.013064100225405153,"score_gpt":0.3372166705970442,"score_spread":0.324152570371639,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2944623510","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99769694,0.00076093845,0.000061615385,0.00007895856,0.0000048928887,0.000016741778,0.00048663266,0.000009274434,0.0008839521],"genre_scores_gemma":[0.998137,0.0010760193,0.000113705035,0.000030798234,0.000006489573,0.000015792424,0.00022057016,0.0000017717258,0.00039774503],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997185,0.00006597597,0.000021944985,0.000049622773,0.00005218123,0.00009172163],"domain_scores_gemma":[0.99963903,0.000041990686,0.00020599176,0.000017641561,0.000045007393,0.00005025503],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020666135,0.00035897267,0.00020314883,0.0012087593,0.0006558607,0.0005102939,0.00025516035,0.00041007632,0.001679012],"category_scores_gemma":[0.0008657665,0.00019260618,0.00022079005,0.0014107259,0.00049420435,0.0002636965,0.00071059656,0.00026583028,0.00015072398],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059432674,0.000017113425,0.99370825,0.0000717362,0.000023829394,0.0003769258,0.0010416376,0.00004473597,0.0005338839,0.000052369927,0.00026330177,0.003806683],"study_design_scores_gemma":[0.0000017170885,0.000044176355,0.99761486,0.000030231451,0.000019508545,0.00045546418,0.001022991,0.00008179527,0.00010049588,0.000021450685,0.0006030038,0.000004309384],"about_ca_topic_score_codex":0.1574959,"about_ca_topic_score_gemma":0.16895199,"teacher_disagreement_score":0.1574959,"about_ca_system_score_codex":0.0011941487,"about_ca_system_score_gemma":0.00091454835,"threshold_uncertainty_score":0.3131584},"labels":[],"label_agreement":null},{"id":"W2944889175","doi":"10.1086/703616","title":"<i>Convergent Evolution in Stone-Tool Technology. <i>Vienna Series in Theoretical Biology</i></i>. Edited by Michael J. O’Brien, Briggs Buchanan, and Metin I. Eren. Cambridge (Massachusetts): MIT Press. $50.00. x + 294 p.; ill.; index. ISBN: 978-0-262-03783-9. 2018.","year":2019,"lang":"en","type":"review","venue":"The Quarterly Review of Biology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Index (typography); Library science; Art history; Sociology; History; Computer science; World Wide Web","score_opus":0.013083902420326282,"score_gpt":0.29483084516049635,"score_spread":0.2817469427401701,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2944889175","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007062636,0.99367285,0.000693237,0.00075819966,0.0008748115,0.0000022149293,0.00002282957,0.000023434923,0.0038816934],"genre_scores_gemma":[0.0028959801,0.98519784,0.0008287952,0.0005705289,0.0010135652,0.0000134314705,0.00007996976,0.000020987833,0.009378873],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99975127,0.000058600453,0.000025236524,0.000056858968,0.00007608534,0.000031927615],"domain_scores_gemma":[0.9997372,0.00014427576,0.000034440633,0.00002137114,0.000038894974,0.000023891302],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052910415,0.0011162306,0.0013595258,0.0017319872,0.0004179452,0.0015775536,0.001258592,0.0015416772,0.011461496],"category_scores_gemma":[0.0007034822,0.0005765595,0.00059967133,0.0022813138,0.0019034503,0.0030449182,0.0012862846,0.0020431916,0.0057575707],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004936086,0.000029312889,0.00015638453,0.0058594644,0.00007131933,0.00020346402,0.00021436473,0.0007528201,0.001638598,0.07275056,0.21084358,0.7074308],"study_design_scores_gemma":[0.000004865073,0.000024453619,0.00038255742,0.0010533693,0.000015864754,0.00060421124,0.000065972345,0.00017275731,0.00048369498,0.028735027,0.9684425,0.000014854689],"about_ca_topic_score_codex":0.0023247965,"about_ca_topic_score_gemma":0.0040293406,"teacher_disagreement_score":0.011461496,"about_ca_system_score_codex":0.0014015883,"about_ca_system_score_gemma":0.0011025859,"threshold_uncertainty_score":0.038342535},"labels":[],"label_agreement":null},{"id":"W2946727900","doi":"10.1086/703620","title":"<i><i>Smilodon</i>: The Iconic Sabertooth</i>. Edited by Lars Werdelin, H. Gregory McDonald, and Christopher A. Shaw. Baltimore (Maryland): Johns Hopkins University Press. $110.00. xi + 212 p. + 15 pl.; ill.; index. ISBN: 9781421425566 (hc); 9781421425573 (eb). 2018.","year":2019,"lang":"en","type":"review","venue":"The Quarterly Review of Biology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Alberta Museum","funders":"","keywords":"Index (typography); History; Environmental ethics; Library science; Art history; Philosophy; Computer science; World Wide Web","score_opus":0.018805861776744943,"score_gpt":0.28482891413098443,"score_spread":0.2660230523542395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2946727900","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009922258,0.9830877,0.00018979929,0.0010798943,0.005466684,0.000006714718,0.00009797723,0.000043264696,0.009928681],"genre_scores_gemma":[0.0012073793,0.9474779,0.00047219172,0.0013208272,0.00354157,0.000018560295,0.00030244433,0.00004695712,0.045612276],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99979943,0.000036015776,0.00002550637,0.000039787927,0.000074798285,0.000024381628],"domain_scores_gemma":[0.99975365,0.000080098966,0.0000464706,0.000012624739,0.0000592349,0.000047915477],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035528853,0.001654903,0.0013614414,0.0022841904,0.0004522398,0.0019247514,0.0010127404,0.0012434212,0.03573393],"category_scores_gemma":[0.00068803533,0.00055956637,0.00059169764,0.0028990973,0.00083587726,0.0024215288,0.0014560255,0.0023600894,0.02698783],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059995353,0.000026856902,0.00011661522,0.0042594434,0.000022767694,0.00013556053,0.00015328404,0.000115073206,0.00086963974,0.0034474176,0.49285957,0.49793386],"study_design_scores_gemma":[0.000001840091,0.00001217517,0.0002085906,0.0008232254,0.0000054203747,0.00032106545,0.000041587387,0.000013806028,0.00006929873,0.00091240916,0.997586,0.0000045492466],"about_ca_topic_score_codex":0.0033091134,"about_ca_topic_score_gemma":0.006916754,"teacher_disagreement_score":0.03573393,"about_ca_system_score_codex":0.0007272294,"about_ca_system_score_gemma":0.0014173351,"threshold_uncertainty_score":0.11954194},"labels":[],"label_agreement":null},{"id":"W2948613349","doi":"10.1130/abs/2019se-327315","title":"BENTHIC FORAMINIFERAL COMMUNITY CHANGES ACROSS THE PLIOCENE YORKTOWN FORMATION, SOUTHEASTERN VIRGINIA","year":2019,"lang":"en","type":"article","venue":"Abstracts with programs - Geological Society of America","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Geoscience BC","funders":"","keywords":"Benthic zone; Oceanography; Geology","score_opus":0.023030597819610085,"score_gpt":0.28754236362986324,"score_spread":0.26451176581025315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2948613349","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998362,0.00005622516,0.000044787037,0.00002956507,0.0000026094428,0.0000059324725,0.000636601,0.00000553913,0.00085680984],"genre_scores_gemma":[0.9975267,0.00007552624,0.00008802553,0.000014956027,0.0000019662805,0.000011188308,0.0006465615,0.0000038286717,0.0016312111],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9999083,0.000009446553,0.0000064614073,0.000028923245,0.000018579658,0.00002823915],"domain_scores_gemma":[0.9996722,0.000027528391,0.00007086917,0.000016266073,0.00014232221,0.000070798036],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010576701,0.00008594458,0.00015586609,0.00097325625,0.0010348517,0.0007789443,0.00046057734,0.00016767705,0.0016613781],"category_scores_gemma":[0.00040396492,0.00015264122,0.00010688176,0.001058275,0.0003284881,0.00033545005,0.0006650929,0.00020571101,0.00021318796],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000079713944,0.000018610517,0.988477,0.000017763225,0.000041843246,0.000100456215,0.0019237489,0.00013825184,0.0023919956,0.00011296071,0.000754083,0.0059435726],"study_design_scores_gemma":[0.000001389577,0.00000522783,0.9981042,0.0000044435396,0.0000036725282,0.000014235173,0.0010399411,0.00006822088,0.00007768395,0.0000048841425,0.0006752038,9.53528e-7],"about_ca_topic_score_codex":0.6829259,"about_ca_topic_score_gemma":0.9160477,"teacher_disagreement_score":0.6829259,"about_ca_system_score_codex":0.002332377,"about_ca_system_score_gemma":0.0014146395,"threshold_uncertainty_score":0.6378828},"labels":[],"label_agreement":null},{"id":"W2950415190","doi":"10.29173/bluejay370","title":"Pleas for Protection of Fish-eating Bird Colonies Reminiscences of a Biologist","year":2018,"lang":"en","type":"article","venue":"Blue Jay","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Biologist; Fish <Actinopterygii>; Fishery; Zoology; Biology; Botany","score_opus":0.03420769195506181,"score_gpt":0.3200771284076038,"score_spread":0.285869436452542,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2950415190","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002332651,0.02672023,0.0010527633,0.7643777,0.18174872,0.000070130256,0.00014545357,0.0002626541,0.023289686],"genre_scores_gemma":[0.025161793,0.018887943,0.0031591323,0.50116074,0.12544438,0.00019517123,0.00013224945,0.00023111403,0.32562754],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99800605,0.0004711767,0.00013390068,0.00041610256,0.00065236795,0.00032051644],"domain_scores_gemma":[0.9886805,0.001260452,0.00059959886,0.0008376377,0.002291969,0.0063298894],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029581208,0.0013436736,0.00065228477,0.0007819281,0.0035378006,0.002636902,0.0016104125,0.008433425,0.045053966],"category_scores_gemma":[0.008431567,0.00056394836,0.0012920616,0.00026376138,0.0022510835,0.0029590984,0.004079186,0.015993733,0.01958307],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000097831544,0.000109940425,0.00071966875,0.000106337015,0.000028830444,0.00076177483,0.00016989642,0.000049200436,0.0015551465,0.00093583623,0.97622424,0.01924126],"study_design_scores_gemma":[0.000031345146,0.000089953246,0.0021599869,0.000154616,0.000017230765,0.0012795937,0.0006499627,0.00003250557,0.00026382587,0.0010306324,0.99425817,0.000032048836],"about_ca_topic_score_codex":0.0025995937,"about_ca_topic_score_gemma":0.007773354,"teacher_disagreement_score":0.045053966,"about_ca_system_score_codex":0.001384289,"about_ca_system_score_gemma":0.0017247251,"threshold_uncertainty_score":0.15072054},"labels":[],"label_agreement":null},{"id":"W2951208776","doi":"10.29173/bluejay368","title":"Decline of native prairie in core grassland conservation areas in Southwestern Manitoba 2010-2015","year":2018,"lang":"en","type":"article","venue":"Blue Jay","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Nature Conservancy of Canada; Manitoba Beekeepers' Association","funders":"","keywords":"Grassland; Geography; Agroforestry; Prairie dog; Forestry; Environmental science; Ecology; Biology","score_opus":0.031136086978623245,"score_gpt":0.3170544094211087,"score_spread":0.28591832244248544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2951208776","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964484,0.00047620377,0.00010494892,0.00015978172,0.000009529067,0.000017951905,0.0019431614,0.00001644316,0.0008235305],"genre_scores_gemma":[0.9959609,0.00052768306,0.00026723434,0.00012044404,0.0000060044354,0.000029878334,0.0014763798,0.000002972136,0.0016083828],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997751,0.000027026881,0.00001772877,0.000052023286,0.00004609628,0.000082015235],"domain_scores_gemma":[0.99896944,0.00004616454,0.00033782062,0.000034784338,0.00031905097,0.00029275726],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045403364,0.0003003213,0.00020926484,0.0010795457,0.00088231586,0.0007191042,0.0011751362,0.0003541096,0.0016562406],"category_scores_gemma":[0.000675714,0.0002831673,0.0002993902,0.0014394582,0.00067063264,0.00044436107,0.00088434,0.0004229957,0.00022092588],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007472264,0.00003425106,0.9924287,0.0000836234,0.00009878696,0.00013682498,0.0011325888,0.00013625568,0.0013450313,0.00009307172,0.0009545926,0.00348149],"study_design_scores_gemma":[0.0000014641967,0.000009210838,0.998606,0.000012266455,0.0000087334965,0.000044982928,0.00080251484,0.00006679369,0.00005484813,0.000005185184,0.00038632442,0.0000017509336],"about_ca_topic_score_codex":0.7523858,"about_ca_topic_score_gemma":0.92980677,"teacher_disagreement_score":0.2476142,"about_ca_system_score_codex":0.0042270347,"about_ca_system_score_gemma":0.004369324,"threshold_uncertainty_score":0.49814487},"labels":[],"label_agreement":null},{"id":"W2951499122","doi":"10.1101/036509","title":"Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focus","year":2016,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Yersinia pestis; Plague (disease); Outbreak; Pandemic; Lineage (genetic); Extant taxon; Epidemic disease; Geography; Biology; Disease; Virology; History; Ethnology; Genealogy; Ancient history; Evolutionary biology; Infectious disease (medical specialty); Coronavirus disease 2019 (COVID-19); Medicine; Virulence; Genetics","score_opus":0.017230697393370124,"score_gpt":0.24019946256243038,"score_spread":0.22296876516906025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2951499122","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937716,0.0013687919,0.0008541718,0.00021568412,0.000018155435,0.000003235447,0.002815511,0.00004348775,0.00090942904],"genre_scores_gemma":[0.98296595,0.0011733304,0.0037082802,0.00020673433,0.000023031726,0.00000844336,0.010157671,0.000056206158,0.0017003047],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999248,0.0000079512165,0.0000045336697,0.000026428816,0.000012448552,0.000023932822],"domain_scores_gemma":[0.99982834,0.0000259434,0.0000684158,0.00001784018,0.000024770006,0.00003469777],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019737086,0.00027499214,0.00023751702,0.00060411403,0.0004859607,0.0006987666,0.000120903576,0.0005617204,0.0012579281],"category_scores_gemma":[0.00042903566,0.0001748625,0.00024107621,0.0007600768,0.00023579586,0.0005101624,0.0005888046,0.0005123692,0.000343998],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013313612,0.0000689845,0.14424913,0.0004416016,0.00020419755,0.0016350508,0.004151992,0.0011371295,0.8141023,0.0014751006,0.0019927423,0.0292104],"study_design_scores_gemma":[0.00003817691,0.0001523514,0.9108327,0.00010572252,0.00012376114,0.0016331566,0.0015761702,0.00089076086,0.035256233,0.0008278061,0.048520867,0.00004231521],"about_ca_topic_score_codex":0.0021359955,"about_ca_topic_score_gemma":0.0040677437,"teacher_disagreement_score":0.0021359955,"about_ca_system_score_codex":0.00029387,"about_ca_system_score_gemma":0.00020538941,"threshold_uncertainty_score":0.004247129},"labels":[],"label_agreement":null},{"id":"W2952882858","doi":"10.1099/mgen.0.000133","title":"Phylogeographic separation and formation of sexually discrete lineages in a global population of Yersinia pseudotuberculosis","year":2017,"lang":"en","type":"article","venue":"Microbial Genomics","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Trent University; European Defence Agency; Nottingham Trent University; Helsingin Yliopisto","keywords":"Yersinia pseudotuberculosis; Biology; Population; Phylogeography; Evolutionary biology; Yersinia; Lineage (genetic); Genetics; Biological dispersal; Population genomics; Comparative genomics; Genomics; Genome; Phylogenetics; Gene; Virulence; Bacteria","score_opus":0.009886683649280054,"score_gpt":0.2998115613193984,"score_spread":0.2899248776701183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2952882858","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993048,0.00006681378,0.00031868054,0.000010800767,5.832478e-7,0.0000023120538,0.00007148072,0.0000032822009,0.00022127978],"genre_scores_gemma":[0.9990447,0.00007717287,0.0004198548,0.000016978596,0.0000013156273,0.0000055592973,0.00034993805,0.000004087349,0.00008031385],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998247,0.000042756885,0.000009531139,0.00007678784,0.00001655391,0.000029633951],"domain_scores_gemma":[0.9995813,0.00013632303,0.000121582714,0.00006375028,0.00005460849,0.000042528933],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038415493,0.00013867857,0.00026478182,0.0010006675,0.00032820387,0.00044532475,0.00016784245,0.0002714293,0.0005872552],"category_scores_gemma":[0.00064209837,0.0001247228,0.00021971486,0.00085932994,0.00044459308,0.00025985003,0.00048105622,0.00034497472,0.00010801927],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008218161,0.000097984346,0.78033423,0.00009286495,0.00032859214,0.0004330458,0.0040473184,0.0016442008,0.18377249,0.0008128492,0.00021433673,0.027400196],"study_design_scores_gemma":[0.000015301111,0.00011324875,0.9946267,0.000016541024,0.000056806843,0.00034959172,0.00092720083,0.0012385453,0.0016459308,0.00023666924,0.000759973,0.000013437667],"about_ca_topic_score_codex":0.0011263544,"about_ca_topic_score_gemma":0.0021896367,"teacher_disagreement_score":0.0011263544,"about_ca_system_score_codex":0.00018743766,"about_ca_system_score_gemma":0.00014608835,"threshold_uncertainty_score":0.002239585},"labels":[],"label_agreement":null},{"id":"W2972599183","doi":"10.1101/771220","title":"Patterns of smallpox mortality in London, England, over three centuries","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Canadian Institute for Health Information; Canadian Institute for Advanced Research","funders":"Natural Sciences and Engineering Research Council of Canada; McMaster University; James S. McDonnell Foundation","keywords":"Smallpox; Infectious disease (medical specialty); History; Variola virus; Smallpox virus; Demography; Geography; Genealogy; Medicine; Virology; Disease; Biology; Vaccination; Sociology; Pathology","score_opus":0.014961197849249094,"score_gpt":0.25170673207292926,"score_spread":0.23674553422368017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2972599183","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921591,0.0007573526,0.00014398141,0.0002461009,0.000009429038,0.000009184151,0.005100188,0.000012364721,0.0015623028],"genre_scores_gemma":[0.9947907,0.00047639007,0.00009601758,0.00003039984,0.000012747448,0.000017197284,0.0022929187,0.000008306837,0.0022753985],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99982196,0.000024587029,0.00003140428,0.00005589632,0.00003570452,0.000030517162],"domain_scores_gemma":[0.9982741,0.00022404235,0.00097591506,0.000084279745,0.0003154653,0.00012621746],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023820648,0.00015643875,0.00017342603,0.0017546479,0.00021633829,0.00067706616,0.00027455884,0.00022936714,0.0023272776],"category_scores_gemma":[0.0014108206,0.00013095897,0.00011930231,0.0019971859,0.00038259232,0.0005001096,0.0007098371,0.00013560559,0.00040543193],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024243319,0.000012626933,0.9732736,0.0002098909,0.00007930182,0.00071509613,0.0068398775,0.0007038629,0.002546669,0.0005110072,0.0030423005,0.011823344],"study_design_scores_gemma":[0.0000027570961,0.000009822469,0.9961689,0.000024223804,0.0000058424366,0.000074769494,0.0009572549,0.00016079364,0.00009528634,0.00002383872,0.0024709257,0.0000056008334],"about_ca_topic_score_codex":0.117919415,"about_ca_topic_score_gemma":0.19408025,"teacher_disagreement_score":0.117919415,"about_ca_system_score_codex":0.0012402441,"about_ca_system_score_gemma":0.00037092032,"threshold_uncertainty_score":0.23446608},"labels":[],"label_agreement":null},{"id":"W2972812798","doi":"10.1126/sciadv.aax5068","title":"Structure of human Vitronectin C-terminal domain and interaction with <i>Yersinia pestis</i> outer membrane protein Ail","year":2019,"lang":"en","type":"article","venue":"Science Advances","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Cancer Institute; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Vitronectin; Yersinia pestis; Bacterial outer membrane; Cell biology; Biology; Domain (mathematical analysis); Computational biology; Virulence; Genetics; Gene; Fibronectin","score_opus":0.004931258500753666,"score_gpt":0.2805896243817908,"score_spread":0.27565836588103715,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2972812798","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9680535,0.010526616,0.0027726917,0.0013388491,0.00028182156,0.000046476598,0.0029902777,0.00019226095,0.013797504],"genre_scores_gemma":[0.97992903,0.002175215,0.001954486,0.00071331294,0.00004877915,0.000027858963,0.008482826,0.000029416176,0.006639038],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987674,0.000014554522,0.0000050824765,0.00002849213,0.000044340868,0.00003078863],"domain_scores_gemma":[0.9998288,0.00003574149,0.000043336797,0.000006859572,0.000030173225,0.000054977754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001198534,0.00035072287,0.00032867418,0.00022005176,0.00044619563,0.00033346788,0.000642121,0.0006706905,0.003068162],"category_scores_gemma":[0.00025918023,0.00018861014,0.0004065915,0.00031804503,0.00028178896,0.00032400806,0.00015549631,0.00085541955,0.0006352772],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002748621,0.0004342634,0.0081248,0.0006765129,0.00021084078,0.0065585235,0.0005226981,0.015089013,0.93605745,0.0053355945,0.013538176,0.010703611],"study_design_scores_gemma":[0.00075756287,0.0015155,0.19417657,0.00039511317,0.00038321275,0.008911543,0.001480025,0.19263485,0.45856106,0.0035358472,0.13721493,0.0004338857],"about_ca_topic_score_codex":0.013610763,"about_ca_topic_score_gemma":0.010283412,"teacher_disagreement_score":0.013610763,"about_ca_system_score_codex":0.0021611617,"about_ca_system_score_gemma":0.00069555454,"threshold_uncertainty_score":0.027063072},"labels":[],"label_agreement":null},{"id":"W2975844002","doi":"10.7202/1062446ar","title":"Le renard, le virus et la mort (France, 1925-1998)","year":2019,"lang":"fr","type":"article","venue":"Frontières","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Political science; Humanities; Art","score_opus":0.005879074105297474,"score_gpt":0.2809546655352316,"score_spread":0.2750755914299341,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2975844002","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.62793416,0.19569097,0.0027703426,0.02886739,0.0021316952,0.00008080106,0.0017358513,0.00013771634,0.14065109],"genre_scores_gemma":[0.86228096,0.035598196,0.0012609789,0.0015260973,0.0007832665,0.000025645508,0.0006925962,0.000025595298,0.09780669],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9994844,0.00017616263,0.000012759475,0.00009971782,0.00011201136,0.000114924784],"domain_scores_gemma":[0.9995402,0.000102335856,0.00017034609,0.000020381116,0.00010935231,0.000057327088],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009416572,0.00048812066,0.00020085779,0.0008707631,0.001370606,0.001763751,0.000244139,0.0010388686,0.0047669713],"category_scores_gemma":[0.0017528548,0.00014215262,0.0002974586,0.0005779477,0.0016548778,0.00081316935,0.00056471373,0.0009478235,0.0006533991],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012020505,0.0002384546,0.1731622,0.00084730063,0.00030094193,0.0037157242,0.03393754,0.001976105,0.010536825,0.20785436,0.06988312,0.4963453],"study_design_scores_gemma":[0.000030041441,0.00039081316,0.25786898,0.00033931728,0.000035886827,0.0016200386,0.0044940603,0.00019016638,0.0014123532,0.0023273856,0.7312387,0.000052186202],"about_ca_topic_score_codex":0.22466224,"about_ca_topic_score_gemma":0.21318337,"teacher_disagreement_score":0.22466224,"about_ca_system_score_codex":0.004842139,"about_ca_system_score_gemma":0.0018893327,"threshold_uncertainty_score":0.44670916},"labels":[],"label_agreement":null},{"id":"W2976171441","doi":"10.3138/ecf.32.1.31","title":"Plague’s Ecologies: Daniel Defoe and the Epidemic Constitution","year":2019,"lang":"en","type":"article","venue":"Eighteenth-Century Fiction","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Plague (disease); Isolation (microbiology); Constitution; History; Vulnerability (computing); Natural (archaeology); Environmental ethics; Geography; Law; Political science; Ancient history; Philosophy; Biology; Computer security; Archaeology; Computer science","score_opus":0.006453763313647812,"score_gpt":0.2363231314298976,"score_spread":0.2298693681162498,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2976171441","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.019953493,0.03967496,0.0032599105,0.60140365,0.00591873,0.000018022278,0.00015302422,0.000048492726,0.32956973],"genre_scores_gemma":[0.7695849,0.03195054,0.0018710989,0.071091995,0.0067675584,0.000070675094,0.00014057943,0.00013371727,0.118388884],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988238,0.000524301,0.00004297444,0.00013828544,0.0002702024,0.00020037958],"domain_scores_gemma":[0.9951326,0.0036302998,0.00024766187,0.00019641129,0.0004911847,0.00030175236],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022419195,0.00028577802,0.00032736047,0.0012939163,0.0072669187,0.007670908,0.00057369267,0.0026411593,0.0036352526],"category_scores_gemma":[0.008903777,0.00018868802,0.00018278703,0.0008938974,0.015049243,0.0077628945,0.0026063134,0.005633665,0.00054771936],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014555598,0.000013497387,0.0002824114,0.000026975024,0.0000028889222,0.0001527531,0.009160672,0.00013253787,0.000038432845,0.8770887,0.10735001,0.005736557],"study_design_scores_gemma":[0.000008335492,0.0000050523577,0.0002823094,0.00009782662,0.0000018243818,0.00016275859,0.003629511,0.00016642058,0.00007130871,0.13359441,0.8619687,0.0000115347375],"about_ca_topic_score_codex":0.011422334,"about_ca_topic_score_gemma":0.011637501,"teacher_disagreement_score":0.011422334,"about_ca_system_score_codex":0.00614536,"about_ca_system_score_gemma":0.0022425554,"threshold_uncertainty_score":0.04458791},"labels":[],"label_agreement":null},{"id":"W2978619983","doi":"10.1038/s41467-019-12154-0","title":"Phylogeography of the second plague pandemic revealed through analysis of historical Yersinia pestis genomes","year":2019,"lang":"en","type":"article","venue":"Nature Communications","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":176,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"European Regional Development Fund; Max-Planck-Gesellschaft; European Commission; Queen's University; Eesti Teadusagentuur; Wellcome Trust; University of Bern","keywords":"Yersinia pestis; Plague (disease); Pandemic; Genome; Biology; Outbreak; Virulence; Clade; Lineage (genetic); Evolutionary biology; Genetic diversity; Phylogeography; Phylogenetics; Yersiniosis; Comparative genomics; Genomics; Virology; Genetics; Infectious disease (medical specialty); Gene; Geography; Coronavirus disease 2019 (COVID-19); Disease; Demography; Medicine","score_opus":0.01604966973478923,"score_gpt":0.30065039010225236,"score_spread":0.28460072036746314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2978619983","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99649066,0.00092187995,0.00051821314,0.000045201963,0.0000037209625,0.000003738174,0.0007458548,0.00000872401,0.0012620364],"genre_scores_gemma":[0.997549,0.00053470104,0.00041342634,0.0000129273185,0.0000044451353,0.0000032244318,0.001172821,0.0000046346795,0.00030492723],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99994373,0.000010370489,0.0000028120944,0.00002194208,0.000007025119,0.000014037589],"domain_scores_gemma":[0.9998641,0.000035806926,0.000052404583,0.0000123637265,0.000016342967,0.000018924376],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022500448,0.00011978781,0.00013227183,0.0015120915,0.0002834539,0.00048628298,0.00006602022,0.0001782628,0.0012964205],"category_scores_gemma":[0.00037591922,0.00009175131,0.0001768807,0.0011558501,0.0001886105,0.00021786243,0.00035862616,0.000236046,0.00015541553],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012417705,0.000049634684,0.80952305,0.00027370232,0.00055360247,0.0017117754,0.005212342,0.0025379704,0.11085306,0.0028869743,0.001110998,0.0640451],"study_design_scores_gemma":[0.000005142263,0.000040305218,0.9920689,0.00003487268,0.000049730257,0.0007753749,0.00061614485,0.0005810567,0.00096670736,0.0002673568,0.004588751,0.0000056924387],"about_ca_topic_score_codex":0.0018648792,"about_ca_topic_score_gemma":0.0033300947,"teacher_disagreement_score":0.0018648792,"about_ca_system_score_codex":0.00015510789,"about_ca_system_score_gemma":0.00010887438,"threshold_uncertainty_score":0.004337013},"labels":[],"label_agreement":null},{"id":"W2987441478","doi":"10.33137/confrat.v28i2.29314","title":"Confraternities and the Plague in Orvieto: 1340–1410","year":2018,"lang":"en","type":"article","venue":"Confraternitas","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"","keywords":"Plague (disease); Context (archaeology); Ancient history; History; Outbreak; Population; Piety; Geography; Archaeology; Political science; Sociology; Demography; Law; Medicine; Virology","score_opus":0.007991992477854216,"score_gpt":0.2624614013967259,"score_spread":0.2544694089188717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2987441478","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9854525,0.0002981666,0.0001067204,0.00020128855,0.000014333946,0.000008130509,0.00011546887,0.0000018072061,0.013801705],"genre_scores_gemma":[0.9976871,0.00023822208,0.00008907645,0.000022321969,0.000009050227,0.0000039486345,0.000058998805,0.0000019629429,0.0018893712],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99945575,0.00017010653,0.00003466923,0.000049039856,0.00016700006,0.00012336967],"domain_scores_gemma":[0.9981158,0.00053224096,0.0008206482,0.000104552935,0.0002843399,0.00014246305],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010033628,0.00015538278,0.00009790362,0.0014295643,0.0018232578,0.0020444675,0.00036672168,0.00029630127,0.0033708408],"category_scores_gemma":[0.004844032,0.0001008297,0.00007017908,0.0022620922,0.0018309376,0.0011064939,0.0018186797,0.00066530786,0.00021761995],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018428413,0.00006605391,0.68764514,0.00011641747,0.0000303871,0.0014820978,0.2451833,0.00010172818,0.0035641773,0.014155839,0.00089908694,0.046571475],"study_design_scores_gemma":[0.0000028896125,0.000052405194,0.8059191,0.00013516155,0.000011477397,0.0006872972,0.16841346,0.00015893271,0.0013913031,0.0014405324,0.021760903,0.00002657598],"about_ca_topic_score_codex":0.036426883,"about_ca_topic_score_gemma":0.061667323,"teacher_disagreement_score":0.036426883,"about_ca_system_score_codex":0.0023071384,"about_ca_system_score_gemma":0.0008953106,"threshold_uncertainty_score":0.07242972},"labels":[],"label_agreement":null},{"id":"W2988698835","doi":"10.7554/elife.20983.043","title":"Author response: A molecular portrait of maternal sepsis from Byzantine Troy","year":2016,"lang":"en","type":"peer-review","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Canadian Institute for Advanced Research; McMaster University Medical Centre","funders":"","keywords":"Ancient DNA; Staphylococcus saprophyticus; Biology; Genealogy; Lineage (genetic); History; Evolutionary biology; Zoology; Bacteria; Medicine; Genetics; Staphylococcus; Staphylococcus aureus; Gene","score_opus":0.023104787002436525,"score_gpt":0.3466663370783393,"score_spread":0.3235615500759028,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2988698835","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07296615,0.051269367,0.0060772835,0.70444,0.0943279,0.0002471746,0.005929015,0.00155893,0.06318419],"genre_scores_gemma":[0.30464923,0.04751057,0.010815669,0.3693495,0.024083368,0.00038643184,0.006540588,0.0009742311,0.23569033],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996631,0.000071273105,0.000022891538,0.000069254,0.00009782655,0.0000755984],"domain_scores_gemma":[0.9995402,0.00010874746,0.000061004466,0.000030347624,0.00015188001,0.000107748776],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048935355,0.00031636845,0.00035095832,0.00061891985,0.00097553077,0.0009165652,0.000557394,0.003492107,0.019454556],"category_scores_gemma":[0.0024074626,0.00023880886,0.00033731648,0.0003618573,0.00074014475,0.0006684825,0.00094393885,0.002933381,0.0067548077],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006645444,0.000033993045,0.0073915976,0.000692489,0.000054829023,0.013965042,0.0019515001,0.00021250945,0.040236186,0.002069499,0.877336,0.055391844],"study_design_scores_gemma":[0.000037110654,0.00009874303,0.011721269,0.00036448325,0.00002576802,0.0153140975,0.0027198642,0.00013696031,0.0040700906,0.0011653991,0.96430016,0.00004613473],"about_ca_topic_score_codex":0.0018965156,"about_ca_topic_score_gemma":0.0031282564,"teacher_disagreement_score":0.019454556,"about_ca_system_score_codex":0.0006838451,"about_ca_system_score_gemma":0.00059051363,"threshold_uncertainty_score":0.06508201},"labels":[],"label_agreement":null},{"id":"W2989067141","doi":"10.7554/elife.12994.011","title":"Author response: Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focus","year":2016,"lang":"en","type":"peer-review","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre; McMaster University","funders":"","keywords":"Yersinia pestis; Plague (disease); Outbreak; Pandemic; Genealogy; Geography; History; Epidemic disease; Biology; Ethnology; Virology; Evolutionary biology; Ancient history; Disease; Infectious disease (medical specialty); Coronavirus disease 2019 (COVID-19); Medicine; Genetics; Virulence","score_opus":0.041523145133176065,"score_gpt":0.32998153162777805,"score_spread":0.288458386494602,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2989067141","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0021800383,0.0030471906,0.00082303403,0.73857903,0.22341208,0.000087961045,0.001988207,0.00044750256,0.02943497],"genre_scores_gemma":[0.032510802,0.007597359,0.0013387913,0.4456067,0.06331877,0.00018244871,0.0025344354,0.0006348781,0.4462758],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99770063,0.00052259216,0.00016485859,0.00032272204,0.000946562,0.00034262202],"domain_scores_gemma":[0.9842556,0.003568686,0.0009897908,0.00065072806,0.008529295,0.0020059317],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026743372,0.0007401035,0.00078571757,0.0008075717,0.0015076918,0.002316263,0.0010014309,0.0070773205,0.14359252],"category_scores_gemma":[0.02806518,0.00030439673,0.0004954349,0.0006295831,0.0012266898,0.0016562295,0.0025991003,0.005552776,0.05429514],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005983267,0.00000501911,0.00021894043,0.00017133268,0.000008009792,0.00024530597,0.00017522702,0.0000440059,0.00037396757,0.00050963124,0.99352115,0.004667681],"study_design_scores_gemma":[0.00003073662,0.000028198301,0.0008804854,0.0001996911,0.000008429997,0.0002955513,0.0010053383,0.0000513526,0.0004388121,0.00082144066,0.9962125,0.000027612103],"about_ca_topic_score_codex":0.0019504711,"about_ca_topic_score_gemma":0.003594371,"teacher_disagreement_score":0.14359252,"about_ca_system_score_codex":0.0012574514,"about_ca_system_score_gemma":0.003108051,"threshold_uncertainty_score":0.48036486},"labels":[],"label_agreement":null},{"id":"W2989810596","doi":"10.3390/v11121105","title":"Yersinia Phages and Food Safety","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Jane ja Aatos Erkon Säätiö; Academy of Finland; Helsingin Yliopisto","keywords":"Yersinia enterocolitica; Yersinia; Yersiniosis; Biology; Reactive arthritis; Microbiology; Pathogenic bacteria; Bacteria; Food safety; Enterobacteriaceae; Food science; Escherichia coli; Arthritis; Immunology","score_opus":0.08627275925333903,"score_gpt":0.3791812627007959,"score_spread":0.29290850344745684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2989810596","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000114364964,0.99851996,0.000061631996,0.00021298707,0.00014113181,0.0000016128766,0.00001226423,0.000005948584,0.0009300365],"genre_scores_gemma":[0.00063183316,0.99851483,0.000084238585,0.00010670409,0.000099115896,0.0000025181682,0.000023226157,9.451717e-7,0.0005366882],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99984586,0.00002583778,0.000020555637,0.000029378143,0.00005683659,0.000021580741],"domain_scores_gemma":[0.9996902,0.00015289955,0.00004292959,0.000008896748,0.000076916454,0.000028280174],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045009566,0.00069877587,0.0009152112,0.0020926122,0.00025320973,0.0010191323,0.0005005849,0.0010740494,0.0040641422],"category_scores_gemma":[0.00062726723,0.00020938918,0.0003542384,0.0021810462,0.00040330656,0.00127346,0.00056637777,0.0012795689,0.0018042225],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006165869,0.00006142094,0.00023504849,0.016658919,0.00005853365,0.00016798383,0.000066197834,0.0003054177,0.002807099,0.004297452,0.023903146,0.95137715],"study_design_scores_gemma":[0.0000066770526,0.00006859396,0.0007139415,0.002550463,0.000049903785,0.0006879512,0.000055624943,0.000058575195,0.0005340496,0.0015952894,0.9936668,0.000012018523],"about_ca_topic_score_codex":0.0008788154,"about_ca_topic_score_gemma":0.0012606719,"teacher_disagreement_score":0.0040641422,"about_ca_system_score_codex":0.0005919481,"about_ca_system_score_gemma":0.0011228925,"threshold_uncertainty_score":0.013595939},"labels":[],"label_agreement":null},{"id":"W2991293248","doi":"10.1073/pnas.1903797116","title":"The Justinianic Plague: An inconsequential pandemic?","year":2019,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":172,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Social Sciences and Humanities Research Council of Canada; Max-Planck-Gesellschaft; Universität Wien; University of Oxford; McMaster University; Princeton University; American Council of Learned Societies; National Science Foundation","keywords":"Plague (disease); Pandemic; Antique; Period (music); History; Middle Ages; Geography; Ancient history; Ancient DNA; Politics; Genealogy; Outbreak; Ethnology; Demography; Coronavirus disease 2019 (COVID-19); Political science; Virology; Sociology; Law; Biology; Population; Art; Medicine","score_opus":0.037538537053745845,"score_gpt":0.3422903564623543,"score_spread":0.30475181940860846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2991293248","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.83217543,0.016329968,0.0033316915,0.07630283,0.00086641737,0.000036274418,0.002071863,0.00006825353,0.068817236],"genre_scores_gemma":[0.9883717,0.005899852,0.0008453941,0.002333053,0.00038138725,0.000015427782,0.00064905,0.000012819829,0.0014913301],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992884,0.00024389962,0.00005141158,0.00016414328,0.00014576488,0.000106324886],"domain_scores_gemma":[0.9965551,0.001452099,0.000887914,0.00054844614,0.00038935296,0.00016720842],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019834794,0.00026389168,0.00035005042,0.000850813,0.0014645047,0.0028295803,0.00031490566,0.0009117967,0.003835166],"category_scores_gemma":[0.008969956,0.00011714633,0.00009879927,0.0016938114,0.0039556553,0.004721393,0.0018056202,0.0014516728,0.0004183482],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009079566,0.00012728361,0.40360388,0.0018146522,0.00022572858,0.0032059592,0.05034395,0.0007479596,0.00851825,0.20064676,0.03371531,0.2961423],"study_design_scores_gemma":[0.000027155378,0.00023830497,0.54076207,0.0016354386,0.00010716536,0.0034483767,0.08713079,0.0006707587,0.0030232093,0.109169714,0.25366163,0.0001254333],"about_ca_topic_score_codex":0.0027465431,"about_ca_topic_score_gemma":0.004206636,"teacher_disagreement_score":0.003835166,"about_ca_system_score_codex":0.0010607787,"about_ca_system_score_gemma":0.0009940809,"threshold_uncertainty_score":0.0128299},"labels":[],"label_agreement":null},{"id":"W2994251547","doi":"","title":"[Zoonoses in Quebec].","year":2013,"lang":"fr","type":"article","venue":"PubMed","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Geography; Political science","score_opus":0.015266786115211978,"score_gpt":0.2384867166544604,"score_spread":0.2232199305392484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2994251547","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0066704685,0.41884652,0.001059138,0.040597357,0.037488926,0.0006452664,0.199467,0.00087612815,0.29434928],"genre_scores_gemma":[0.05876606,0.32651812,0.0030802432,0.012324328,0.005847421,0.00043376663,0.08482789,0.0002416022,0.5079606],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99980897,0.000026409705,0.000029786825,0.000017382788,0.00006938615,0.000048069764],"domain_scores_gemma":[0.9988457,0.0000689585,0.00010422467,0.00002529548,0.0008161332,0.00013977988],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003710114,0.0007015002,0.00057192484,0.004755146,0.001429026,0.0015124033,0.001045748,0.0010318039,0.10764439],"category_scores_gemma":[0.001459061,0.00028450682,0.0004443891,0.009696537,0.0005582561,0.0009254793,0.00054041477,0.00092469563,0.010773224],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000079555604,0.0000125741835,0.0034830726,0.0016474546,0.000033519293,0.00035623234,0.00012467487,0.00015448562,0.00014405412,0.0015767604,0.9129765,0.079411],"study_design_scores_gemma":[0.00003273563,0.00002134862,0.029745031,0.0020066404,0.00004141847,0.00032431586,0.00032702414,0.00013088496,0.00006497715,0.00031826698,0.9669694,0.000018021748],"about_ca_topic_score_codex":0.9713175,"about_ca_topic_score_gemma":0.9815568,"teacher_disagreement_score":0.10764439,"about_ca_system_score_codex":0.009386545,"about_ca_system_score_gemma":0.020017155,"threshold_uncertainty_score":0.36010635},"labels":[],"label_agreement":null},{"id":"W3000873225","doi":"10.1093/gbe/evaa008","title":"The Genome of the Great Gerbil Reveals Species-Specific Duplication of an MHCII Gene","year":2020,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"McGill University; Universitetet i Oslo; National Science Council; H2020 European Research Council; Centers for Disease Control and Prevention; Norges Forskningsråd; Norwegian Sequencing Centre; National Natural Science Foundation of China","keywords":"Biology; Genome; Genetics; Gene; Yersinia pestis; Virology; Gerbil; Gene duplication; Virulence","score_opus":0.019291637093923293,"score_gpt":0.2568680612054129,"score_spread":0.2375764241114896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3000873225","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99087393,0.0014238365,0.00272189,0.00007527409,0.00002071876,0.00001124742,0.004009858,0.00013141372,0.00073189795],"genre_scores_gemma":[0.9688154,0.0012818208,0.009685085,0.000116622046,0.000019030927,0.000027257089,0.018314674,0.000081225,0.0016589323],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999517,0.000003732007,0.0000026206412,0.000027867503,0.0000071868635,0.000006907941],"domain_scores_gemma":[0.99992454,0.000010813198,0.000026471616,0.000011016115,0.000007948887,0.000019145029],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000071737224,0.00034852984,0.00019786021,0.00042055297,0.00019026377,0.00028261036,0.00012653971,0.00028899606,0.00075695023],"category_scores_gemma":[0.00016070281,0.00013525819,0.0003685724,0.00041870988,0.00014182321,0.00014671178,0.00029546628,0.00030352964,0.0003608767],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021794732,0.000013659082,0.005373766,0.000116922994,0.00003937672,0.00037025945,0.00010657773,0.00019684604,0.98644674,0.00008437516,0.00013158587,0.0069020037],"study_design_scores_gemma":[0.00005296552,0.0005643404,0.85995984,0.000088381385,0.00038361625,0.0060507106,0.00038189642,0.0027980271,0.10351685,0.0006158795,0.025545506,0.00004214488],"about_ca_topic_score_codex":0.0006883869,"about_ca_topic_score_gemma":0.0009692268,"teacher_disagreement_score":0.00075695023,"about_ca_system_score_codex":0.00014384586,"about_ca_system_score_gemma":0.00015354234,"threshold_uncertainty_score":0.0025322437},"labels":[],"label_agreement":null},{"id":"W3005481528","doi":"","title":"Collections of fleas (Siphonaptera) from Pacific marten, Martes caurina (Carnivora: Mustelidae), reveal unique host–parasite relationships in the Haida Gwaii archipelago","year":2020,"lang":"en","type":"article","venue":"Biodiversity Heritage Library (Smithsonian Institution)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Parks Canada","funders":"","keywords":"Marten; Mustelidae; Flea; Biology; Archipelago; Host (biology); Ecology; Predation; Zoology; Geography; Habitat","score_opus":0.023834134156410725,"score_gpt":0.2167091155346995,"score_spread":0.19287498137828876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3005481528","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935096,0.0004940433,0.00008466678,0.00003096133,0.000006211068,0.000021141985,0.0016883322,0.000012450131,0.0041527567],"genre_scores_gemma":[0.9831638,0.00080801867,0.0014853738,0.000044633263,0.000016668055,0.00002530947,0.008139449,0.000010003156,0.006306933],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99995553,0.0000030581768,0.0000044795183,0.000012402342,0.000016673122,0.000007831987],"domain_scores_gemma":[0.9998472,0.000014357121,0.000048134036,0.0000117611,0.000030173089,0.000048395388],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009556899,0.00020967868,0.00012631777,0.002124749,0.0012107643,0.00047253675,0.00022470862,0.00016658352,0.0039679217],"category_scores_gemma":[0.00019428093,0.00016642713,0.000107963264,0.0014502385,0.0003850152,0.0002895479,0.00051979435,0.0001924885,0.0006480659],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035217055,0.000094283074,0.7685862,0.0001869012,0.000088414454,0.0020601794,0.009448204,0.00014969775,0.11963375,0.00022119758,0.0023517061,0.096827306],"study_design_scores_gemma":[0.0000016024028,0.000012959321,0.9958358,0.0000052036676,0.000006575418,0.0003292398,0.00042260677,0.000021354146,0.0004999586,0.000009887529,0.002852997,0.0000018147787],"about_ca_topic_score_codex":0.055034954,"about_ca_topic_score_gemma":0.18093343,"teacher_disagreement_score":0.055034954,"about_ca_system_score_codex":0.00054486643,"about_ca_system_score_gemma":0.00045810302,"threshold_uncertainty_score":0.10942924},"labels":[],"label_agreement":null},{"id":"W3006901794","doi":"10.4000/vertigo.27040","title":"Spatialisation du risque lié aux tiques et prévention. Étude systémique d’une représentation sociale","year":2019,"lang":"fr","type":"article","venue":"VertigO","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Humanities; Philosophy","score_opus":0.013731431722765449,"score_gpt":0.30470895710895735,"score_spread":0.29097752538619187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3006901794","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80944216,0.0136373695,0.031015048,0.023487527,0.0003384024,0.0003630412,0.0015894504,0.00017262086,0.11995432],"genre_scores_gemma":[0.99098796,0.0018944492,0.0028770384,0.0002486603,0.000035102403,0.0001026254,0.00016713025,0.000016342887,0.003670724],"study_design_codex":"qualitative","study_design_gemma":"qualitative","domain_scores_codex":[0.9901697,0.006948476,0.0002853066,0.0008635259,0.0010207541,0.00071216916],"domain_scores_gemma":[0.99143666,0.0041734525,0.0017050337,0.0006654631,0.0016302597,0.00038919985],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.007847895,0.0005070618,0.000602703,0.0047464543,0.0038859157,0.0068281638,0.0013281673,0.0011062952,0.008626641],"category_scores_gemma":[0.015520667,0.00046586673,0.0009402726,0.0051300796,0.008582791,0.003568516,0.004517525,0.0012705226,0.00051425124],"study_design_candidate":"qualitative","study_design_consensus":"qualitative","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019382582,0.000135695,0.22334503,0.0014410891,0.00034014342,0.0005385997,0.4231243,0.0026834847,0.0012098666,0.18604757,0.0045010727,0.15643935],"study_design_scores_gemma":[0.00003875678,0.00033845007,0.3757213,0.002335252,0.00039450396,0.0008237406,0.41866654,0.005294495,0.001077438,0.0797005,0.11539379,0.00021515845],"about_ca_topic_score_codex":0.15959783,"about_ca_topic_score_gemma":0.09981983,"teacher_disagreement_score":0.15959783,"about_ca_system_score_codex":0.011550531,"about_ca_system_score_gemma":0.00926028,"threshold_uncertainty_score":0.3173377},"labels":[],"label_agreement":null},{"id":"W3007595093","doi":"10.22621/cfn.v133i3.2115","title":"Sharp-tailed Grouse (&lt;i&gt;Tympanuchus phasianellus&lt;/i&gt;) population dynamics and restoration of fire-dependent northern mixed-grass prairie","year":2020,"lang":"en","type":"article","venue":"The Canadian Field-Naturalist","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"U.S. Fish and Wildlife Service","keywords":"Grouse; Lek mating; Abundance (ecology); Geography; Prescribed burn; Population; Forestry; Habitat; Ecology; Population density; Demography; Biology; Mating","score_opus":0.012339510744183579,"score_gpt":0.24075341147928542,"score_spread":0.22841390073510184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3007595093","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9998791,0.000009596525,0.00001464193,0.0000023235314,2.1408914e-7,0.0000016802165,0.000007850157,4.260116e-7,0.00008407219],"genre_scores_gemma":[0.99966216,0.00002704314,0.00013194859,0.000003821618,7.0210615e-7,0.0000031241982,0.000049410457,3.08979e-7,0.00012145592],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999887,0.000019053241,0.0000068318977,0.00003109607,0.000021444659,0.000034609184],"domain_scores_gemma":[0.99978846,0.000015867568,0.00008866389,0.000015826854,0.000024392268,0.00006675605],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002667898,0.00014249828,0.00011340672,0.00028203218,0.0002987777,0.0002569486,0.00025226656,0.00012741245,0.00046310344],"category_scores_gemma":[0.0003931642,0.000129015,0.00017086187,0.00018365898,0.00034563555,0.00023158018,0.00026837995,0.00018109023,0.000079012716],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033342995,0.00020102983,0.9630316,0.00003353428,0.00004445792,0.0009059116,0.0010536178,0.0005300422,0.022377372,0.00007394473,0.00010821531,0.011306775],"study_design_scores_gemma":[0.0000032826226,0.00016928157,0.99853575,0.0000021318265,0.0000051797583,0.00018178693,0.0002452789,0.0002541755,0.00045562972,0.000010277708,0.00013476764,0.000002357571],"about_ca_topic_score_codex":0.01783166,"about_ca_topic_score_gemma":0.08474534,"teacher_disagreement_score":0.9821683,"about_ca_system_score_codex":0.0005912897,"about_ca_system_score_gemma":0.00031575313,"threshold_uncertainty_score":0.035455704},"labels":[],"label_agreement":null},{"id":"W3008884533","doi":"10.15184/aqy.2019.213","title":"A Black Death mass grave at Thornton Abbey: the discovery and examination of a fourteenth-century rural catastrophe","year":2020,"lang":"en","type":"article","venue":"Antiquity","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"History; Ancient history; Classics; Archaeology","score_opus":0.018369992185873454,"score_gpt":0.2685825382822186,"score_spread":0.2502125460963452,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3008884533","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38290414,0.028536446,0.003368719,0.31337506,0.005933202,0.000084668376,0.00042095737,0.00015750714,0.26521927],"genre_scores_gemma":[0.87107396,0.008490513,0.0011959197,0.021621997,0.0010318813,0.000040929866,0.00008385451,0.00011046534,0.096350566],"study_design_codex":"qualitative","study_design_gemma":"observational","domain_scores_codex":[0.9993137,0.00021823475,0.000011766455,0.00011885807,0.00014546445,0.00019189592],"domain_scores_gemma":[0.99848086,0.00043830115,0.0002017325,0.00010891061,0.00037033617,0.00039989152],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017438061,0.00041122135,0.00029703128,0.0008785534,0.01362345,0.005299544,0.000804138,0.0034457257,0.01142904],"category_scores_gemma":[0.003526016,0.0002323966,0.00019740945,0.00065494276,0.013860814,0.0038274748,0.004528707,0.0061323554,0.0007620274],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003429908,0.00008865772,0.010387215,0.00043555078,0.000058941627,0.006387628,0.3620766,0.00035695377,0.005866605,0.296526,0.25559136,0.061881483],"study_design_scores_gemma":[0.000007370927,0.000051846633,0.007387554,0.00036014896,0.0000075811104,0.00061891956,0.10771301,0.00009423798,0.00063710724,0.019295601,0.86379313,0.000033547247],"about_ca_topic_score_codex":0.02029092,"about_ca_topic_score_gemma":0.062040742,"teacher_disagreement_score":0.02029092,"about_ca_system_score_codex":0.004466026,"about_ca_system_score_gemma":0.0033512914,"threshold_uncertainty_score":0.04034561},"labels":[],"label_agreement":null},{"id":"W3011837401","doi":"","title":"Investigation of a <i>Yersinia enterocolitica</i> outbreak in a commercial alpaca farm in Saskatchewan.","year":2019,"lang":"en","type":"article","venue":"PubMed","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Outbreak; Yersiniosis; Yersinia enterocolitica; Medicine; Feces; Diarrhea; Internal medicine; Microbiology; Biology; Virology; Enterobacteriaceae; Bacteria","score_opus":0.015505419076733806,"score_gpt":0.23969635871729947,"score_spread":0.22419093964056566,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3011837401","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99838674,0.00012199587,0.00007654625,0.00013332957,0.000008371203,0.000035729616,0.00015496352,0.0000059606914,0.0010764076],"genre_scores_gemma":[0.99785006,0.00031904408,0.00021363382,0.00029521727,0.000013180986,0.000011754276,0.00038575026,0.0000018674372,0.0009095284],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997584,0.00003421104,0.000017703822,0.000047538106,0.000058759524,0.00008327982],"domain_scores_gemma":[0.99947256,0.000056414046,0.00014080417,0.000013670857,0.00013223506,0.00018423951],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044572397,0.00047534925,0.00023366929,0.0008491049,0.001534259,0.0007226755,0.0004997515,0.00088627136,0.0008556026],"category_scores_gemma":[0.00038194002,0.00030201997,0.00018809436,0.00064972916,0.0008103213,0.0003455415,0.00049005536,0.0008021673,0.00016402773],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040251482,0.00061330595,0.91823727,0.00016411551,0.00010952255,0.027538678,0.0016047789,0.00038574703,0.04557197,0.00013038228,0.0006998138,0.0045418898],"study_design_scores_gemma":[0.00002711827,0.000698926,0.987884,0.000027731883,0.000030955158,0.0038185164,0.0037857704,0.00044909073,0.0020266415,0.000046541303,0.0011913829,0.000013279586],"about_ca_topic_score_codex":0.16743635,"about_ca_topic_score_gemma":0.31412938,"teacher_disagreement_score":0.83256364,"about_ca_system_score_codex":0.0044184476,"about_ca_system_score_gemma":0.0028126007,"threshold_uncertainty_score":0.33292353},"labels":[],"label_agreement":null},{"id":"W3016451326","doi":"10.24272/j.issn.2095-8137.2018.053","title":"中国姬鼠属和家鼠属物种多样性","year":2018,"lang":"zh","type":"article","venue":"动物学研究","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Ontario Museum","funders":"","keywords":"Apodemus; Subspecies; Biology; Zoology; GenBank; Rodent; Phylogenetic tree; Ecology; Gene; Genetics","score_opus":0.01573121843926218,"score_gpt":0.3100668281903132,"score_spread":0.29433560975105105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3016451326","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99876416,0.00025239814,0.0002442229,0.000015265996,0.0000029034145,0.000008594079,0.00010534492,0.000004377746,0.00060275954],"genre_scores_gemma":[0.99800366,0.00026782128,0.0010879657,0.00001790071,0.00000653304,0.000009530606,0.00029312065,0.0000012577826,0.00031223873],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998147,0.000028696597,0.000023484978,0.000054970056,0.000043215634,0.00003494606],"domain_scores_gemma":[0.99968946,0.000028169872,0.00015911553,0.000023006647,0.000045550256,0.00005479857],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030529333,0.00028291636,0.00015701738,0.0012276645,0.0003957147,0.00023744842,0.00019312273,0.0001188215,0.000798728],"category_scores_gemma":[0.0002614741,0.00013565292,0.00015203259,0.00071654405,0.00045036,0.0003040797,0.00039775076,0.000156562,0.00013611042],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000096431424,0.000020635827,0.92735094,0.00008604948,0.000034659308,0.00027808917,0.0004749673,0.000043511165,0.046182454,0.00012349196,0.00007296172,0.025235808],"study_design_scores_gemma":[0.0000026845798,0.000053048465,0.9972777,0.0000073440538,0.000012664121,0.00040171045,0.00020670968,0.00007049838,0.0014867692,0.000035906578,0.00044242718,0.0000026225016],"about_ca_topic_score_codex":0.0032125956,"about_ca_topic_score_gemma":0.008872726,"teacher_disagreement_score":0.0032125956,"about_ca_system_score_codex":0.00020019167,"about_ca_system_score_gemma":0.00029340055,"threshold_uncertainty_score":0.00638783},"labels":[],"label_agreement":null},{"id":"W3016830892","doi":"10.1139/gen-2019-0161","title":"Genetic and molecular features for hepadnavirus and plague infections in the Himalayan marmot","year":2020,"lang":"en","type":"article","venue":"Genome","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Biology; Marmot; Virology; Gene; Plague (disease); Major histocompatibility complex; Immune system; Genetics","score_opus":0.01322826035116485,"score_gpt":0.2666264674097806,"score_spread":0.2533982070586157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3016830892","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99941957,0.00013047036,0.00010760681,0.000008629212,0.0000014635765,0.000005615917,0.00008993732,0.0000030391675,0.00023373996],"genre_scores_gemma":[0.9993081,0.00011694675,0.00014842222,0.0000119117885,0.00000387436,0.000008776286,0.0002147174,0.0000014939809,0.00018566601],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998956,0.000016724594,0.000012040875,0.000031089607,0.000021102025,0.000023507717],"domain_scores_gemma":[0.99989355,0.000011424973,0.000047752244,0.000007826424,0.000006585345,0.00003282045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008613731,0.00018110148,0.00013471,0.0006628158,0.0003712074,0.00020855592,0.00009436232,0.00024150319,0.00086836447],"category_scores_gemma":[0.00014986283,0.00011861502,0.0002058307,0.0003132447,0.00030109077,0.00012360749,0.00019542112,0.00018722296,0.00010835177],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006163274,0.000089537476,0.04591491,0.000064609434,0.00005959558,0.0028928465,0.00047829322,0.000111253124,0.9469499,0.00036232607,0.00004899245,0.0024113676],"study_design_scores_gemma":[0.000016988717,0.00036438127,0.9694094,0.000009623951,0.000075898395,0.0076506916,0.00047627705,0.00044466485,0.020368204,0.00024026194,0.0009314963,0.0000120900795],"about_ca_topic_score_codex":0.0012473274,"about_ca_topic_score_gemma":0.0011434206,"teacher_disagreement_score":0.0012473274,"about_ca_system_score_codex":0.00019455641,"about_ca_system_score_gemma":0.0000870823,"threshold_uncertainty_score":0.002904892},"labels":[],"label_agreement":null},{"id":"W3022529826","doi":"","title":"Pre-contact Inuit dog genomes show a lost wealth of dog diversity in the North American Arctic","year":2020,"lang":"en","type":"article","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Diversity (politics); Arctic; Geography; Genome; The arctic; Biology; Zoology; Evolutionary biology; Ecology; Oceanography; Genetics; Geology; Gene; Sociology; Anthropology","score_opus":0.020522199902428383,"score_gpt":0.2814696668108319,"score_spread":0.26094746690840354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3022529826","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940969,0.00051966024,0.00046450333,0.00012204054,0.000021870563,0.0000032312382,0.0018319624,0.000025297695,0.002914456],"genre_scores_gemma":[0.9924718,0.0004302801,0.0006373939,0.0001487267,0.000016159342,0.0000067397114,0.0044293203,0.000039751994,0.0018197744],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99977976,0.000017421315,0.000009609491,0.00006815096,0.00005669668,0.000068341855],"domain_scores_gemma":[0.9995474,0.000054347445,0.00008537343,0.000038032285,0.000133642,0.00014118355],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027211334,0.00025790904,0.0003670284,0.0009194876,0.0014150849,0.0012309039,0.000259566,0.00046947296,0.0025040538],"category_scores_gemma":[0.0006206837,0.00016770183,0.00028946428,0.0016556265,0.00033787487,0.00058210606,0.0007853268,0.0005225074,0.0005464887],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026938014,0.00014178053,0.47643456,0.00033803715,0.0005578884,0.0024863046,0.007999095,0.0008478068,0.45818618,0.0023750102,0.0043044323,0.04363511],"study_design_scores_gemma":[0.0000144558135,0.000078571706,0.9678876,0.00004487208,0.00010748823,0.0011375801,0.0042061377,0.0005746683,0.0055230353,0.0002832135,0.020120375,0.000021953116],"about_ca_topic_score_codex":0.037014715,"about_ca_topic_score_gemma":0.089825526,"teacher_disagreement_score":0.037014715,"about_ca_system_score_codex":0.00080721505,"about_ca_system_score_gemma":0.0006753622,"threshold_uncertainty_score":0.07359856},"labels":[],"label_agreement":null},{"id":"W3025993548","doi":"10.1002/ecs2.3138","title":"Enzootic maintenance of sylvatic plague in Canada's threatened black‐tailed prairie dog ecosystem","year":2020,"lang":"en","type":"article","venue":"Ecosphere","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba; Public Health Agency of Canada; Canadian Science Centre for Human and Animal Health; Toronto Zoo; Parks Canada","funders":"Canadian Wildlife Health Cooperative; Parks Canada","keywords":"Cynomys ludovicianus; Flea; Prairie dog; Biology; Enzootic; Ecology; Plague (disease); Yersinia pestis; Threatened species; Occupancy; Burrow; Zoology; Geography; Habitat","score_opus":0.009930190235133283,"score_gpt":0.22138898841105006,"score_spread":0.21145879817591678,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3025993548","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987299,0.00009882875,0.00007572819,0.000019377883,0.0000010345101,0.000008102484,0.0006785716,0.000005575744,0.00038272553],"genre_scores_gemma":[0.9986444,0.00008515634,0.00022504258,0.000014687751,0.0000011938046,0.0000073362703,0.0009106952,0.0000013290916,0.00011028154],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99959236,0.00003769855,0.000018630857,0.000113859525,0.000104588355,0.00013288518],"domain_scores_gemma":[0.9990094,0.00005099895,0.00029654137,0.000060676583,0.0004139676,0.00016837129],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051252433,0.00019565622,0.00023143165,0.0016819471,0.0007879561,0.00095335365,0.00046211263,0.0001924294,0.00052800257],"category_scores_gemma":[0.00094483467,0.00013300883,0.00020881499,0.0015019629,0.00054839585,0.00034740512,0.0007529997,0.00027476126,0.00005782983],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002780685,0.000009480222,0.9969344,0.000009254178,0.000040965635,0.000021792257,0.00022051166,0.00008745696,0.00096279074,0.00001973234,0.0001038699,0.001561927],"study_design_scores_gemma":[5.1280506e-7,0.000007747629,0.99929166,0.0000044440258,0.000009332777,0.000013221572,0.00031084864,0.00015111272,0.000054283762,0.0000043592804,0.00015147575,0.0000010450843],"about_ca_topic_score_codex":0.7551627,"about_ca_topic_score_gemma":0.9164267,"teacher_disagreement_score":0.24483728,"about_ca_system_score_codex":0.004666879,"about_ca_system_score_gemma":0.0030111978,"threshold_uncertainty_score":0.49255836},"labels":[],"label_agreement":null},{"id":"W3033161309","doi":"","title":"2014 Report on Research Results for Minamata Disease in First Nations Groups in Canada (Preliminary Report)","year":2016,"lang":"en","type":"article","venue":"Medical Entomology and Zoology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Political science; Environmental health; Economic growth; Medicine; Economics","score_opus":0.019338147905311662,"score_gpt":0.32691711800490497,"score_spread":0.3075789700995933,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3033161309","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5747632,0.02219518,0.004159155,0.009410817,0.0019462453,0.003587307,0.22246505,0.0005729054,0.16090019],"genre_scores_gemma":[0.71715236,0.0139843915,0.008376422,0.0035210624,0.00029211727,0.0006685164,0.10733609,0.00010986999,0.14855914],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981781,0.0001044343,0.00009717021,0.00011771644,0.00088418444,0.00061823404],"domain_scores_gemma":[0.99427235,0.0002735593,0.0002911141,0.000086098225,0.004212373,0.0008645066],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013159047,0.00072045723,0.00036236268,0.005651558,0.003096273,0.0013315191,0.0010024651,0.0006795951,0.009220916],"category_scores_gemma":[0.0021038766,0.00032503615,0.000744661,0.0051217824,0.0005047368,0.00042803786,0.0007948099,0.00087912066,0.0016266993],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008393858,0.0005876787,0.74214816,0.0011306584,0.00026059957,0.0012243055,0.0018795596,0.00053310615,0.007520612,0.00064222934,0.10769334,0.13554038],"study_design_scores_gemma":[0.000023635475,0.00023808778,0.9181258,0.00014302015,0.00017485817,0.00024206095,0.002264303,0.00013253452,0.0040841047,0.0000692097,0.07447203,0.000030321586],"about_ca_topic_score_codex":0.9776503,"about_ca_topic_score_gemma":0.9848668,"teacher_disagreement_score":0.022349715,"about_ca_system_score_codex":0.016143266,"about_ca_system_score_gemma":0.037849613,"threshold_uncertainty_score":0.117128134},"labels":[],"label_agreement":null},{"id":"W3035486957","doi":"10.1038/s41598-020-66012-x","title":"A treponemal genome from an historic plague victim supports a recent emergence of yaws and its presence in 15th century Europe","year":2020,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Social Sciences and Humanities Research Council of Canada; Max-Planck-Institut für Menschheitsgeschichte; Max-Planck-Gesellschaft; Deutscher Akademischer Austauschdienst; European Commission","keywords":"Plague (disease); Yersinia pestis; Syphilis; Disease; Treponema; Ancient DNA; Virology; Pathogen; Biology; Genome; Identification (biology); Infectious disease (medical specialty); Geography; Medicine; Genetics; Archaeology; Gene; Ecology; Environmental health; Pathology; Virulence","score_opus":0.02010870220150434,"score_gpt":0.27463159042786306,"score_spread":0.2545228882263587,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3035486957","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971852,0.00024407105,0.0005690435,0.000048107355,0.00001559684,0.0000062369068,0.0009626872,0.00001607732,0.00095301087],"genre_scores_gemma":[0.99638075,0.00022480993,0.0009764163,0.000055265384,0.000010441277,0.0000040055575,0.0016437591,0.000009874258,0.0006947484],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999478,0.000005865148,0.0000034413001,0.000019147263,0.000008943496,0.000014815301],"domain_scores_gemma":[0.99988484,0.000033714216,0.000029063773,0.00001299044,0.000017543425,0.000021857564],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010360663,0.00011146118,0.00014284084,0.0005175188,0.00028589548,0.00036737425,0.0001097663,0.00029559166,0.002078267],"category_scores_gemma":[0.00024262645,0.000078967896,0.00023001341,0.00036987726,0.00021056541,0.000107900574,0.0003016085,0.00023695923,0.0002541879],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00068482925,0.00008861322,0.12328876,0.000157104,0.00011051635,0.0044352436,0.002157971,0.0002833363,0.85407436,0.00047112667,0.00030377335,0.013944446],"study_design_scores_gemma":[0.000011672932,0.00023951221,0.94834197,0.000052221887,0.00007184312,0.007133969,0.0017359451,0.0005664733,0.033418518,0.00019567648,0.008218116,0.000014107111],"about_ca_topic_score_codex":0.0010339608,"about_ca_topic_score_gemma":0.0014614786,"teacher_disagreement_score":0.002078267,"about_ca_system_score_codex":0.000110860594,"about_ca_system_score_gemma":0.00009148772,"threshold_uncertainty_score":0.0069524646},"labels":[],"label_agreement":null},{"id":"W3038077244","doi":"10.1111/eva.13049","title":"Using genetic relatedness to understand heterogeneous distributions of urban rat‐associated pathogens","year":2020,"lang":"en","type":"article","venue":"Evolutionary Applications","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Centre for Disease Control; Government of British Columbia; Ministry of Agriculture; University of British Columbia; Ministry of Health","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; National Science Foundation","keywords":"Biology; Evolutionary biology; Ecology; Computational biology","score_opus":0.03204891660037998,"score_gpt":0.28962920294137184,"score_spread":0.25758028634099184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3038077244","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972228,0.000062267034,0.002366605,0.000010967665,8.5135645e-7,0.0000053004,0.00009576112,0.000008400207,0.0002271176],"genre_scores_gemma":[0.999,0.000021285963,0.0008312444,0.000006144557,9.431282e-7,0.000004238982,0.000069273505,0.0000019811798,0.00006478169],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997023,0.00012452414,0.000009991449,0.00010362277,0.000023093686,0.000036473626],"domain_scores_gemma":[0.99923897,0.00021775441,0.00038289838,0.000054214528,0.0000476749,0.00005860138],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048235772,0.00022356703,0.0002221618,0.0013983101,0.00019120966,0.00034450652,0.00023083201,0.0002273035,0.0007382301],"category_scores_gemma":[0.0011408944,0.00011509097,0.00016475629,0.00061746803,0.00035027374,0.0002826799,0.00030672754,0.00019654175,0.00009662408],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012898464,0.00006768996,0.96277714,0.0000250871,0.00013982695,0.000096586045,0.00026045972,0.0020523833,0.026113052,0.00028538954,0.00006068476,0.007992758],"study_design_scores_gemma":[0.0000026893683,0.000069033675,0.99250495,0.00000455683,0.000022117745,0.00005680071,0.00021651643,0.006286091,0.00048181368,0.00024409014,0.00010598197,0.0000053276626],"about_ca_topic_score_codex":0.011771856,"about_ca_topic_score_gemma":0.026556036,"teacher_disagreement_score":0.011771856,"about_ca_system_score_codex":0.00033331913,"about_ca_system_score_gemma":0.0001761007,"threshold_uncertainty_score":0.023406684},"labels":[],"label_agreement":null},{"id":"W3038638301","doi":"10.1101/2020.07.01.20144097","title":"Pulse-Controlled Amplification – a new powerful tool for front-line diagnostics","year":2020,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Defence Research and Development Canada","funders":"","keywords":"Yersinia pestis; Polymerase chain reaction; Molecular diagnostics; Nucleic acid; Context (archaeology); Recombinase Polymerase Amplification; Biology; Computational biology; Nanotechnology; Materials science; Genetics; Gene","score_opus":0.03214429955011467,"score_gpt":0.31646551500133974,"score_spread":0.2843212154512251,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3038638301","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.021936955,0.011379141,0.94434434,0.0014700327,0.0013413661,0.00022039568,0.0004953562,0.0074629146,0.011349483],"genre_scores_gemma":[0.24350563,0.009628177,0.7180785,0.0022191836,0.0011419986,0.0007310007,0.0010902182,0.00071038934,0.02289496],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978331,0.00033366893,0.000079830585,0.0005117581,0.0011433508,0.000098306584],"domain_scores_gemma":[0.9990822,0.00031117766,0.00012660585,0.00017402727,0.0002360745,0.000069946065],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012411086,0.0009848165,0.0006547057,0.0013020086,0.00035193027,0.001662325,0.0016165883,0.0014829173,0.004405152],"category_scores_gemma":[0.0013100929,0.00070626865,0.0005372175,0.00068492093,0.0010756867,0.0013941627,0.0013173084,0.0023841271,0.0037883644],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012335599,0.000055389366,0.00021115369,0.00028205302,0.000029013498,0.00016068859,0.0000665523,0.0005249276,0.9050535,0.004852947,0.0044387453,0.08420173],"study_design_scores_gemma":[0.000036068515,0.000271755,0.00046677282,0.00009051216,0.000044767476,0.00078627875,0.0000279596,0.016497811,0.8756493,0.0036183347,0.102437824,0.000072532544],"about_ca_topic_score_codex":0.00026876046,"about_ca_topic_score_gemma":0.00018510304,"teacher_disagreement_score":0.004405152,"about_ca_system_score_codex":0.00061419146,"about_ca_system_score_gemma":0.00040312437,"threshold_uncertainty_score":0.014736652},"labels":[],"label_agreement":null},{"id":"W3041719627","doi":"10.1017/rqx.2020.51","title":": <i>Renaissance Mass Murder: Civilians and Soldiers during the Italian Wars</i>","year":2020,"lang":"en","type":"article","venue":"Renaissance Quarterly","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"","keywords":"The Renaissance; History; Classics; Art history","score_opus":0.009622521685261315,"score_gpt":0.23481314890542443,"score_spread":0.22519062722016311,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3041719627","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09395363,0.13754782,0.000640746,0.5431038,0.045337982,0.00012499983,0.006327785,0.00023908122,0.17272416],"genre_scores_gemma":[0.5386077,0.09386407,0.0007126449,0.046942342,0.043814015,0.00014940235,0.005333192,0.00016539794,0.27041134],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99970216,0.00009220706,0.000020631944,0.00003933234,0.00006456512,0.00008101332],"domain_scores_gemma":[0.99929166,0.0001820653,0.00016970691,0.000035432127,0.00014151406,0.00017954649],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011157396,0.00046945305,0.00020674494,0.0011845981,0.002246528,0.0024167786,0.00045928164,0.0025612984,0.024618011],"category_scores_gemma":[0.0027230226,0.0001467907,0.00018037559,0.0013416673,0.0013937319,0.00128667,0.0012025979,0.0011886372,0.003365781],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000966963,0.000022185177,0.018200116,0.00055420276,0.000017829589,0.00074322516,0.013978113,0.000042254564,0.00041557735,0.004306118,0.9204267,0.041197],"study_design_scores_gemma":[0.000009751972,0.00007307224,0.18959253,0.0007280878,0.000015793457,0.0011172103,0.017622532,0.00003021402,0.00019265397,0.00088694255,0.78970927,0.000021838665],"about_ca_topic_score_codex":0.043757103,"about_ca_topic_score_gemma":0.109197,"teacher_disagreement_score":0.043757103,"about_ca_system_score_codex":0.0018146624,"about_ca_system_score_gemma":0.0012370227,"threshold_uncertainty_score":0.08700484},"labels":[],"label_agreement":null},{"id":"W3046604909","doi":"10.7202/1071945ar","title":"Activity Areas or Conflict Episode? Interpreting the Spatial Patterning of Lice and Fleas at the Precontact Yup’ik Site of Nunalleq (Sixteenth to Seventeenth Centuries AD, Alaska)","year":2019,"lang":"en","type":"article","venue":"Études/Inuit/Studies","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Arts and Humanities Research Council; European Commission","keywords":"Carrion; Host (biology); Archaeology; Projectile point; Biology; Geography; Ecology","score_opus":0.025606543129559595,"score_gpt":0.3220305606879949,"score_spread":0.2964240175584353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3046604909","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998329,0.00014326636,0.000080324615,0.000034732675,0.0000026892687,0.0000022718357,0.00015071483,0.0000016863298,0.0012553228],"genre_scores_gemma":[0.99942565,0.00007344267,0.000110904235,0.0000053040803,0.0000018346624,0.000002915235,0.00010983557,0.0000014670413,0.00026864497],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999843,0.000043351305,0.000011562216,0.000040333704,0.000017318283,0.000044416443],"domain_scores_gemma":[0.999647,0.00009693678,0.00011227408,0.000022965864,0.00006832691,0.000052525385],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003245064,0.0001187746,0.00014932407,0.0011407846,0.0006840465,0.0009788838,0.00025422184,0.00024391376,0.0015487153],"category_scores_gemma":[0.0010229801,0.00011853564,0.00010501698,0.0014498022,0.0006486424,0.00050969206,0.00060027174,0.00020129589,0.0001792061],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055117165,0.000010376822,0.983108,0.000029196366,0.000023015838,0.0002523006,0.009861272,0.00011288361,0.0010799123,0.000160907,0.00016194137,0.0051450706],"study_design_scores_gemma":[7.7637856e-7,0.000008809137,0.97813725,0.000020285037,0.000008498295,0.00007939945,0.02066463,0.00018281327,0.000079189515,0.000053438092,0.0007614852,0.0000032984997],"about_ca_topic_score_codex":0.13827625,"about_ca_topic_score_gemma":0.27297983,"teacher_disagreement_score":0.13827625,"about_ca_system_score_codex":0.0005430585,"about_ca_system_score_gemma":0.00034498554,"threshold_uncertainty_score":0.27494276},"labels":[],"label_agreement":null},{"id":"W3048020764","doi":"10.31862/2073-9613-2020-2-284-303","title":"Medical Microbiology on the Pages of “Scientific Notes of Kazan University” (Chronicle of 1879)","year":2020,"lang":"en","type":"article","venue":"Prepodavatel XXI vek","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Plague (disease); Quarter (Canadian coin); History; Medical science; Measles; Classics; Library science; Medicine; Ancient history; Virology; Medical education; Computer science; Archaeology","score_opus":0.02677344097620005,"score_gpt":0.25668217374991065,"score_spread":0.2299087327737106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3048020764","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004230439,0.122044176,0.0007259185,0.052672356,0.39991128,0.00021323685,0.003983297,0.00042697284,0.41579238],"genre_scores_gemma":[0.04587577,0.066705,0.0011738107,0.01894047,0.15934005,0.00025174988,0.0035806599,0.00033616708,0.7037964],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982571,0.00040278162,0.00018653204,0.00021685567,0.0005891719,0.00034758257],"domain_scores_gemma":[0.9976705,0.0005304712,0.00045652763,0.00021007843,0.0006800173,0.00045231814],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.001448163,0.00096193625,0.00070549396,0.0036102333,0.002992045,0.006107467,0.0005850741,0.0018771973,0.12128668],"category_scores_gemma":[0.0052064257,0.00020470726,0.0004211425,0.003925871,0.0020349505,0.0033750208,0.0028420936,0.0019864107,0.046332307],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043020642,0.000012279079,0.00025806774,0.00037002825,0.000003633744,0.000079656915,0.0003917928,0.000017674032,0.00030748473,0.023357587,0.9443604,0.030798402],"study_design_scores_gemma":[0.0000010940928,0.0000055603377,0.00041157004,0.00011567567,6.6289743e-7,0.000045253648,0.00006113272,0.0000030374254,0.000030931966,0.00029262053,0.9990306,0.00000201193],"about_ca_topic_score_codex":0.0026913902,"about_ca_topic_score_gemma":0.004846769,"teacher_disagreement_score":0.99700797,"about_ca_system_score_codex":0.002211657,"about_ca_system_score_gemma":0.00252538,"threshold_uncertainty_score":0.40574437},"labels":[],"label_agreement":null},{"id":"W3049199753","doi":"","title":"Candidate Cepheid Variables in the Coma Cluster","year":2007,"lang":"en","type":"article","venue":"NPARC","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Cepheid variable; Coma (optics); Cluster (spacecraft); Coma Cluster; Computer science; Physics; Astrophysics; Galaxy cluster","score_opus":0.009519537408793249,"score_gpt":0.27929412817868315,"score_spread":0.2697745907698899,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3049199753","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9365728,0.0017391017,0.0013065131,0.009890958,0.00205532,0.00025833616,0.009641896,0.00019391972,0.038341127],"genre_scores_gemma":[0.9703049,0.00047042943,0.0010751372,0.00045448804,0.0010084595,0.00007196293,0.00508169,0.000090657195,0.021442296],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994904,0.00010758806,0.000030658823,0.000078808414,0.00017256504,0.00012005245],"domain_scores_gemma":[0.9938532,0.0015068235,0.000776173,0.0003026244,0.0018562403,0.0017048665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008684364,0.00029346067,0.0004968861,0.0016374952,0.0012034929,0.0009801282,0.00070649415,0.0007815302,0.056019146],"category_scores_gemma":[0.0105248345,0.00010617738,0.0002827524,0.0016010145,0.0003756948,0.000410134,0.0006082603,0.00055283424,0.0051934514],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026717172,0.000238381,0.7868053,0.000584782,0.00020605852,0.0044587003,0.00044021578,0.0005651485,0.0044998117,0.0021561792,0.118148535,0.079225235],"study_design_scores_gemma":[0.00021071109,0.00019466582,0.95076174,0.00011077791,0.00012403201,0.0020218708,0.0009199665,0.0013845774,0.0018328305,0.0015688824,0.04083819,0.000031704156],"about_ca_topic_score_codex":0.003065918,"about_ca_topic_score_gemma":0.004386983,"teacher_disagreement_score":0.056019146,"about_ca_system_score_codex":0.0003671453,"about_ca_system_score_gemma":0.0009899782,"threshold_uncertainty_score":0.18740273},"labels":[],"label_agreement":null},{"id":"W3080389850","doi":"10.1007/s10437-020-09405-7","title":"Disease as a Factor in the African Archaeological Record","year":2020,"lang":"en","type":"article","venue":"African Archaeological Review","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Ethnology; Plague (disease); Geography; Disease; History; Humanities; Archaeology; Medicine; Art","score_opus":0.048037058553674995,"score_gpt":0.322177640901843,"score_spread":0.27414058234816796,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3080389850","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010176069,0.9975395,0.00003568034,0.0008428824,0.00032583644,0.0000011503911,0.000012792562,7.1592945e-7,0.00022377867],"genre_scores_gemma":[0.0045144744,0.99453706,0.00005895898,0.00027151435,0.00049829483,0.0000020668472,0.000012853587,8.3241014e-7,0.00010399146],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9996489,0.00009493846,0.00007858314,0.000065629436,0.000059022317,0.000052931995],"domain_scores_gemma":[0.99794596,0.0013668715,0.00032082372,0.000034067954,0.00024180306,0.00009034951],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014443108,0.00061517337,0.0008187933,0.0042938413,0.00072952453,0.0019756395,0.0005019935,0.0012259545,0.001431158],"category_scores_gemma":[0.0028264015,0.00028597834,0.00025086128,0.007914136,0.0018866792,0.0017505876,0.0011518954,0.0013961177,0.00020721996],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034598305,0.00004218221,0.0077561815,0.059381746,0.00028327323,0.0021349555,0.004022185,0.00035846795,0.0036039269,0.014693724,0.018380105,0.8889972],"study_design_scores_gemma":[0.00001499728,0.00015698133,0.036711525,0.027366597,0.0004014386,0.003919252,0.0047059334,0.00009808727,0.0007184001,0.0038763243,0.9219829,0.000047489437],"about_ca_topic_score_codex":0.0052013355,"about_ca_topic_score_gemma":0.009398359,"teacher_disagreement_score":0.0052013355,"about_ca_system_score_codex":0.0010309853,"about_ca_system_score_gemma":0.003334965,"threshold_uncertainty_score":0.010342121},"labels":[],"label_agreement":null},{"id":"W3080698071","doi":"10.31548/dopovidi2020.03.014","title":"Toxigenity of Yersinia enterocolitica strains isolated from various objects","year":2020,"lang":"en","type":"article","venue":"Naukovì dopovìdì Nacìonalʹnogo unìversitetu bìoresursiv ì prirodokoristuvannâ Ukraïni","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Yersinia enterocolitica; Microbiology; Yersinia; Biology; Bacteria; Genetics","score_opus":0.015720578492477183,"score_gpt":0.25766992761069735,"score_spread":0.24194934911822016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3080698071","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926502,0.00068737613,0.00039333597,0.000051508956,0.00007710805,0.000070981296,0.002061344,0.000027807753,0.0039801938],"genre_scores_gemma":[0.9914185,0.00086063944,0.0008000233,0.00012968345,0.000036586367,0.00005450001,0.0035836305,0.000009988238,0.0031064292],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996804,0.000027541562,0.000027940618,0.00009733335,0.000066679735,0.00010016671],"domain_scores_gemma":[0.9997185,0.000052218467,0.00007371453,0.000021343325,0.00008328023,0.00005084215],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016448757,0.0006560067,0.00029461284,0.0008838624,0.00031026808,0.0005087022,0.0001432484,0.00034360762,0.0030185075],"category_scores_gemma":[0.0004593926,0.00012995981,0.0003474132,0.0006908999,0.00023712782,0.00029632414,0.00042398192,0.0003824481,0.0006671813],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019467522,0.00050597533,0.25452968,0.00049621373,0.00010388091,0.0037084115,0.0014843863,0.00011231883,0.7188447,0.00022531897,0.0008638376,0.01717851],"study_design_scores_gemma":[0.00003428514,0.0025764718,0.883673,0.00008977128,0.00017166162,0.004822369,0.0015305477,0.00021325954,0.101452656,0.00014433083,0.005264877,0.0000266947],"about_ca_topic_score_codex":0.0019295244,"about_ca_topic_score_gemma":0.000759659,"teacher_disagreement_score":0.0030185075,"about_ca_system_score_codex":0.00020857343,"about_ca_system_score_gemma":0.00020717924,"threshold_uncertainty_score":0.010097861},"labels":[],"label_agreement":null},{"id":"W3080728546","doi":"10.1093/jme/tjaa161","title":"Molecular Differentiation of Four Species of Oropsylla (Siphonaptera: Ceratophyllidae) Using PCR-Based Single Strand Conformation Polymorphism Analyses and DNA Sequencing","year":2020,"lang":"en","type":"article","venue":"Journal of Medical Entomology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; University of Manitoba; Parks Canada; University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Parks Canada; University of Saskatchewan","keywords":"Biology; DNA sequencing; Genetics; DNA; Polymorphism (computer science); Polymerase chain reaction; Molecular biology; Gene; Evolutionary biology; Genotype","score_opus":0.07988509545108573,"score_gpt":0.32773695453135304,"score_spread":0.2478518590802673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3080728546","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972989,0.00039786473,0.0013384825,0.00001545341,0.000004541081,0.000035699195,0.00034835146,0.00001663852,0.0005439961],"genre_scores_gemma":[0.9840634,0.00053580024,0.012435371,0.000066082815,0.0000070823294,0.00010580982,0.0020573796,0.000012810702,0.00071624183],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998004,0.000024758969,0.000029438537,0.000087293985,0.000031550124,0.000026547328],"domain_scores_gemma":[0.9996418,0.00007129136,0.00014529434,0.000018271929,0.00007356155,0.00004982961],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021020653,0.0003687158,0.00026313044,0.00093534304,0.0002041027,0.00033792356,0.00018595517,0.00048781876,0.00065983814],"category_scores_gemma":[0.00043737653,0.00017371168,0.00037331664,0.00038356922,0.00019314115,0.00026794762,0.00028864635,0.00017094857,0.0002684803],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021531488,0.000036064557,0.04154598,0.00011375789,0.00003107937,0.00016127077,0.00023618278,0.0000996371,0.95004976,0.000035499812,0.000017408043,0.0074580745],"study_design_scores_gemma":[0.00003118998,0.00071284466,0.91972214,0.000047298192,0.00012137192,0.0014082626,0.00058394164,0.0018381735,0.07324327,0.00008210329,0.002183894,0.000025494834],"about_ca_topic_score_codex":0.001078921,"about_ca_topic_score_gemma":0.0030987423,"teacher_disagreement_score":0.001078921,"about_ca_system_score_codex":0.00024708817,"about_ca_system_score_gemma":0.00016604876,"threshold_uncertainty_score":0.0022073388},"labels":[],"label_agreement":null},{"id":"W3081530117","doi":"10.1017/s0031182020001602","title":"Compositional turnover in ecto- and endoparasite assemblages of an African bat,<i>Miniopterus natalensis</i>(Chiroptera, Miniopteridae): effects of hierarchical scale and host sex","year":2020,"lang":"en","type":"article","venue":"Parasitology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Coquitlam College","funders":"National Research Foundation","keywords":"Biology; Host (biology); Niche; Zoology; Ecology","score_opus":0.006769769905654526,"score_gpt":0.2714138602656744,"score_spread":0.26464409036001985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3081530117","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9997987,0.00004129872,0.0000522516,0.0000031346474,2.8090852e-7,0.0000017038461,0.00002571047,0.000001121968,0.000075752934],"genre_scores_gemma":[0.999696,0.000024937135,0.00012650386,0.0000053175604,0.0000013682359,0.0000040073955,0.00007933921,0.0000011619223,0.00006146994],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997508,0.0000578736,0.000023343788,0.00008133978,0.000043484524,0.000043080825],"domain_scores_gemma":[0.99880815,0.00020144328,0.00051777926,0.00007850342,0.00025529257,0.00013878242],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034989262,0.00017407133,0.00023601447,0.0008345438,0.00048340697,0.00052746834,0.0002803764,0.00026511424,0.0007698059],"category_scores_gemma":[0.001212932,0.00022589916,0.00016548653,0.00041006343,0.000529587,0.0005467833,0.0005938629,0.00021205372,0.00019744069],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010303611,0.00002550758,0.9630475,0.000037920632,0.00004927492,0.000050858813,0.000916243,0.00013034753,0.031261478,0.000037631202,0.000027151771,0.0043130014],"study_design_scores_gemma":[6.9165486e-7,0.000024691886,0.9990151,0.0000019198405,0.0000060339676,0.00005036088,0.00017956887,0.00024060547,0.000419613,0.000012160409,0.000047648307,0.0000015646702],"about_ca_topic_score_codex":0.003917822,"about_ca_topic_score_gemma":0.010364816,"teacher_disagreement_score":0.003917822,"about_ca_system_score_codex":0.00029583692,"about_ca_system_score_gemma":0.0001391833,"threshold_uncertainty_score":0.007790029},"labels":[],"label_agreement":null},{"id":"W3082479716","doi":"10.1073/pnas.1917504117","title":"Early evolutionary loss of the lipid A modifying enzyme PagP resulting in innate immune evasion in <i>Yersinia pestis</i>","year":2020,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Office of Extramural Research, National Institutes of Health; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institute of General Medical Sciences; Government of Canada","keywords":"Yersinia pestis; Biology; Innate immune system; Lipid A; Immune system; Microbiology; Virology; TLR4; Yersinia pseudotuberculosis; Yersinia; Evasion (ethics); Lipopolysaccharide; Immunology; Genetics; Gene; Bacteria; Virulence","score_opus":0.039172844924627845,"score_gpt":0.3025974714420076,"score_spread":0.26342462651737975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3082479716","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99753076,0.00033602375,0.0010847822,0.00007697571,0.000012763179,0.000010540017,0.00018907557,0.000025297837,0.0007339896],"genre_scores_gemma":[0.99769896,0.00018566834,0.00079070585,0.00005828701,0.0000075637568,0.000007871816,0.00039116395,0.0000136082845,0.0008461269],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998957,0.000017904073,0.00001053667,0.0000275476,0.000019300316,0.000029000075],"domain_scores_gemma":[0.99986076,0.000025011226,0.000045456636,0.00001802646,0.000018699824,0.00003200596],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019539335,0.00026016735,0.00019523637,0.00026429075,0.00024842567,0.00033634924,0.00018783538,0.0004725719,0.00076691847],"category_scores_gemma":[0.00027998214,0.00011141209,0.00024171053,0.00023193416,0.00033736115,0.00017825038,0.0003199217,0.0005948642,0.0002836818],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035894808,0.000041935193,0.006699902,0.000036826117,0.000019962774,0.0008825003,0.00005621544,0.00015104366,0.98702973,0.00024390152,0.000060139093,0.004418818],"study_design_scores_gemma":[0.00007378635,0.0013449802,0.34927216,0.000040877178,0.00011499756,0.01461002,0.00046434707,0.0024444659,0.62102896,0.0005596404,0.009998115,0.00004757676],"about_ca_topic_score_codex":0.0006853052,"about_ca_topic_score_gemma":0.00054657494,"teacher_disagreement_score":0.00076691847,"about_ca_system_score_codex":0.00034140114,"about_ca_system_score_gemma":0.00021838424,"threshold_uncertainty_score":0.0025656223},"labels":[],"label_agreement":null},{"id":"W3083858062","doi":"10.1007/s11033-020-05779-8","title":"Development of a specific marker for detection of a functional AvrLm9 allele and validating the interaction between AvrLm7 and AvrLm9 in Leptosphaeria maculans","year":2020,"lang":"en","type":"article","venue":"Molecular Biology Reports","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Saskatchewan Canola Development Commission","keywords":"Leptosphaeria maculans; Allele; Computational biology; Biology; Genetics; Gene","score_opus":0.03133259500997377,"score_gpt":0.2999822239861901,"score_spread":0.26864962897621636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3083858062","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88784057,0.0004947784,0.10457969,0.0004038489,0.00013717113,0.00036937618,0.0023156914,0.00093804824,0.0029208022],"genre_scores_gemma":[0.89762604,0.00040301107,0.0886019,0.00017230694,0.00002474196,0.000346387,0.0065406794,0.00035486152,0.0059301388],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995616,0.000074128664,0.000064781525,0.000107073676,0.00012742783,0.00006492538],"domain_scores_gemma":[0.99924785,0.0002464119,0.00019448572,0.00012112826,0.00009340733,0.000096634234],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039416284,0.000613595,0.00042506083,0.0007255549,0.00028633358,0.00040964695,0.000714431,0.0007021878,0.0017809853],"category_scores_gemma":[0.0005383588,0.00044395274,0.0005750667,0.0003437423,0.00035220414,0.00026246044,0.000680036,0.0012022898,0.0015264831],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000116563,0.000013955169,0.000071698414,0.00000917723,0.0000015109346,0.000021005908,0.0000062221143,0.000015614285,0.99936444,0.000051745366,0.000008255565,0.00042475064],"study_design_scores_gemma":[0.000011606368,0.00008379417,0.0024216538,0.0000056903295,0.00001516938,0.00020322808,0.000027432623,0.0006103809,0.99500376,0.000052122152,0.0015585974,0.000006491054],"about_ca_topic_score_codex":0.00090654066,"about_ca_topic_score_gemma":0.0011370898,"teacher_disagreement_score":0.0017809853,"about_ca_system_score_codex":0.0003539741,"about_ca_system_score_gemma":0.00032272187,"threshold_uncertainty_score":0.0059580207},"labels":[],"label_agreement":null},{"id":"W3090552365","doi":"10.1002/bes2.1741","title":"Enzootic Maintenance of Sylvatic Plague in Canada's Threatened Black‐Tailed Prairie Dog Ecosystem","year":2020,"lang":"en","type":"article","venue":"Bulletin of the Ecological Society of America","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Plague (disease); Enzootic; Flea; Yersinia pestis; Threatened species; Ecology; Geography; Range (aeronautics); Population; Biology; Cynomys ludovicianus; Prairie dog; Demography; Habitat; Archaeology","score_opus":0.010308893119699958,"score_gpt":0.21690565571015138,"score_spread":0.20659676259045143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3090552365","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947339,0.0011692839,0.00009880079,0.0003480782,0.000004552284,0.0000055965966,0.00033784565,0.00001190264,0.0032900604],"genre_scores_gemma":[0.99828726,0.000894329,0.00013499522,0.000036410303,0.000003880141,0.0000019587328,0.00026188005,0.0000024218582,0.00037673465],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996816,0.0000304217,0.000011782603,0.000042029733,0.000094800416,0.00013939053],"domain_scores_gemma":[0.9992974,0.00004383629,0.00021235793,0.000024916544,0.00020538377,0.0002161038],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038605605,0.00013231019,0.00013639287,0.0014873722,0.0013097223,0.0014148585,0.00038617567,0.00022145882,0.0009249071],"category_scores_gemma":[0.0008004927,0.0001301199,0.000098826495,0.0010618167,0.0013916588,0.0004947801,0.000954177,0.00039700602,0.00007496544],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014328278,0.000030976702,0.9524516,0.00007377795,0.000053668922,0.0004770255,0.0052307225,0.00035326966,0.0044882046,0.0006269404,0.0018554314,0.034215197],"study_design_scores_gemma":[8.5068604e-7,0.00001293224,0.9962627,0.000018261173,0.000006545389,0.00011483316,0.0015969262,0.00016600789,0.00008213184,0.00006904009,0.0016653261,0.000004454081],"about_ca_topic_score_codex":0.8336676,"about_ca_topic_score_gemma":0.9483884,"teacher_disagreement_score":0.16633242,"about_ca_system_score_codex":0.008812266,"about_ca_system_score_gemma":0.006666544,"threshold_uncertainty_score":0.33462393},"labels":[],"label_agreement":null},{"id":"W3092384753","doi":"10.1016/j.cub.2020.08.081","title":"The Recovery, Interpretation and Use of Ancient Pathogen Genomes","year":2020,"lang":"en","type":"review","venue":"Current Biology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":73,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Canadian Institute for Advanced Research","funders":"","keywords":"Biology; Interpretation (philosophy); Genome; Evolutionary biology; Computational biology; Genetics; Gene","score_opus":0.06464556551793399,"score_gpt":0.37309253411639987,"score_spread":0.3084469685984659,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3092384753","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00017336704,0.99781215,0.00089907454,0.00029694708,0.00021722628,0.000005972848,0.000046099278,0.000014578007,0.00053460494],"genre_scores_gemma":[0.0009162273,0.99724615,0.0010407802,0.00020282657,0.0001819758,0.000008017564,0.0001040039,0.000003880103,0.000296251],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99962246,0.0000712581,0.000035429734,0.00011220389,0.000118296935,0.00004034935],"domain_scores_gemma":[0.9985518,0.0009181516,0.00012391317,0.00007927282,0.00025435956,0.0000724492],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001985408,0.0013375913,0.0022066527,0.0023354848,0.00032652667,0.0020570054,0.0014691239,0.002159173,0.0023855837],"category_scores_gemma":[0.0023580391,0.0005033881,0.00057522074,0.002469937,0.001357024,0.0023394013,0.0011410796,0.002529992,0.0017203499],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014812175,0.000048447826,0.00032912317,0.017856974,0.00010259389,0.00016689181,0.00007240409,0.00065128115,0.009616458,0.007942818,0.014477953,0.948587],"study_design_scores_gemma":[0.000022833814,0.00009082382,0.0010738861,0.0028229482,0.00018373162,0.00088049955,0.0000784095,0.00023672721,0.0036689707,0.0050293473,0.98586845,0.000043325057],"about_ca_topic_score_codex":0.0013830095,"about_ca_topic_score_gemma":0.001597666,"teacher_disagreement_score":0.0023855837,"about_ca_system_score_codex":0.0009676292,"about_ca_system_score_gemma":0.0018141407,"threshold_uncertainty_score":0.010499954},"labels":[],"label_agreement":null},{"id":"W3093195815","doi":"10.1073/pnas.2004904117","title":"Acceleration of plague outbreaks in the second pandemic","year":2020,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria; McMaster University","funders":"Social Sciences and Humanities Research Council of Canada; Natural Sciences and Engineering Research Council of Canada; Government of Canada; James S. McDonnell Foundation","keywords":"Plague (disease); Outbreak; Pandemic; Geography; Transmission (telecommunications); Yersinia pestis; Demography; Population; Coronavirus disease 2019 (COVID-19); Biology; Virology; Medicine; Archaeology; Infectious disease (medical specialty); Computer science","score_opus":0.07052221002513465,"score_gpt":0.33870581719339343,"score_spread":0.2681836071682588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3093195815","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99439245,0.00059284084,0.00015246132,0.0002315001,0.000024648543,0.000010155392,0.00036513386,0.000027010785,0.004203816],"genre_scores_gemma":[0.99872833,0.00021356507,0.000104954874,0.000041901214,0.000023261231,0.0000060519997,0.00030954252,0.0000028497957,0.0005696106],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99981576,0.000026007407,0.000013099088,0.000037552523,0.0000403488,0.00006721386],"domain_scores_gemma":[0.9991937,0.000080952195,0.000359122,0.000087545806,0.00014396787,0.00013470274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004961927,0.00016761613,0.00021140023,0.00079192873,0.00030600667,0.00090145576,0.00015331221,0.00044550945,0.0031378071],"category_scores_gemma":[0.0015772772,0.00016217535,0.00019496513,0.00038492546,0.000266959,0.0004954113,0.00060459186,0.00048672745,0.00068281905],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014252884,0.00009253276,0.93228114,0.00015108535,0.00010937161,0.00092381897,0.0011976315,0.0016931216,0.029495656,0.0018998636,0.00338697,0.02734354],"study_design_scores_gemma":[0.0000120877085,0.00009858802,0.9953768,0.000014922115,0.00000944959,0.00034998517,0.00034371798,0.000336572,0.0009759684,0.00019271015,0.002279483,0.000009548696],"about_ca_topic_score_codex":0.0039267717,"about_ca_topic_score_gemma":0.0046545863,"teacher_disagreement_score":0.0039267717,"about_ca_system_score_codex":0.0007946036,"about_ca_system_score_gemma":0.00030844362,"threshold_uncertainty_score":0.010496974},"labels":[],"label_agreement":null},{"id":"W3095842723","doi":"10.1093/ajcp/aqaa161.308","title":"Risk of Urban Zoonosis from Geese Colonized with Antimicrobial Resistant Bacteria","year":2020,"lang":"en","type":"article","venue":"American Journal of Clinical Pathology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Feces; Antimicrobial; Antibiotic resistance; Zoonosis; Microbiology; Biology; Veterinary medicine; Transmission (telecommunications); Enterococcus; Antibiotics; Medicine","score_opus":0.021467140525727936,"score_gpt":0.32621687586714476,"score_spread":0.3047497353414168,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3095842723","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993844,0.000079059835,0.000042959906,0.000020740876,0.000001973376,0.000006154265,0.000104808605,0.0000026648947,0.00035713837],"genre_scores_gemma":[0.9992384,0.00012487595,0.000104185136,0.0000232718,0.0000042076995,0.0000053480694,0.00016722412,0.0000011194053,0.00033147057],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99974996,0.000050133072,0.000022337257,0.000043366334,0.000058149446,0.00007614897],"domain_scores_gemma":[0.9993482,0.00006860412,0.00029369027,0.000030604042,0.00011251273,0.00014639202],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022003078,0.00022254109,0.00014122526,0.00046804914,0.00040979713,0.0004986397,0.00015132809,0.00026454235,0.0031017943],"category_scores_gemma":[0.00077167444,0.00013657703,0.00019529967,0.00033048843,0.0002238076,0.00021642764,0.00044031677,0.0002324901,0.0002502106],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025771593,0.000023315333,0.99787724,0.000010138886,0.000012007704,0.0001838488,0.00007550963,0.000015832768,0.00041079038,0.0000059534123,0.000068009074,0.0012914923],"study_design_scores_gemma":[0.0000023313771,0.00024596628,0.99716586,0.000021383321,0.000014454061,0.0009626043,0.0008355168,0.00011630485,0.00027348136,0.000017015072,0.00034134332,0.0000036301808],"about_ca_topic_score_codex":0.008573748,"about_ca_topic_score_gemma":0.013632193,"teacher_disagreement_score":0.008573748,"about_ca_system_score_codex":0.00015451417,"about_ca_system_score_gemma":0.00021845567,"threshold_uncertainty_score":0.017047644},"labels":[],"label_agreement":null},{"id":"W3106565915","doi":"10.1101/2020.11.25.20238741","title":"“I don’t feel safe sitting in my own yard”: Chicago resident experiences with urban rats during a COVID-19 stay-at-home order","year":2020,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Science Foundation","keywords":"Environmental health; Public health; Feeling; Stressor; Yard; Pandemic; Coronavirus disease 2019 (COVID-19); Psychology; Geography; Medicine; Socioeconomics; Demography; Gerontology; Disease; Social psychology; Sociology; Infectious disease (medical specialty); Nursing; Psychiatry","score_opus":0.022141762784390374,"score_gpt":0.29733358852143865,"score_spread":0.27519182573704826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3106565915","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981652,0.00016608571,0.000084591746,0.0007243542,0.000026923442,0.000008763707,0.00003342238,0.000004391888,0.000786342],"genre_scores_gemma":[0.9986394,0.00023773557,0.000114657356,0.0004585835,0.000016286052,0.00001374702,0.00003287292,0.0000038638964,0.0004828639],"study_design_codex":"qualitative","study_design_gemma":"qualitative","domain_scores_codex":[0.9990281,0.00049651944,0.000043071122,0.00006932892,0.0001308643,0.00023205731],"domain_scores_gemma":[0.9978048,0.00046617302,0.00061759446,0.000062521525,0.00023927278,0.000809593],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014023414,0.00024019291,0.00026701626,0.00040768873,0.002714322,0.0013939244,0.00066252187,0.0006811344,0.0029079444],"category_scores_gemma":[0.0030122057,0.00032023567,0.00031134934,0.00033518425,0.002480597,0.0010174904,0.0019762435,0.0013762717,0.00022041817],"study_design_candidate":"qualitative","study_design_consensus":"qualitative","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025491414,0.00030661837,0.4405418,0.0002711369,0.00008501649,0.0032567005,0.52598196,0.00015090752,0.001566825,0.00062944554,0.009080671,0.017873978],"study_design_scores_gemma":[0.000005945637,0.00027707854,0.13419744,0.00015830397,0.000021266798,0.0007321965,0.8582897,0.0001410927,0.00015503423,0.00010910881,0.0058675264,0.000045240842],"about_ca_topic_score_codex":0.03919332,"about_ca_topic_score_gemma":0.10232028,"teacher_disagreement_score":0.03919332,"about_ca_system_score_codex":0.0018587179,"about_ca_system_score_gemma":0.0019721678,"threshold_uncertainty_score":0.07793039},"labels":[],"label_agreement":null},{"id":"W3111143154","doi":"10.1111/1600-0498.12359","title":"Edited by EfthymiosNicolaïdisGreek alchemy from late antiquity to early modernity, Turnhout, Belgium: Brepols, 2018, 198 pp. + 21 col. ill. <scp>ISBN</scp> : 9782503581910","year":2020,"lang":"en","type":"article","venue":"Centaurus","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Winnipeg","funders":"","keywords":"Alchemy; Modernity; History; Citation; Classics; Art history; Humanities; Art; Library science; Political science; Law; Computer science","score_opus":0.01764641674359177,"score_gpt":0.26206210524066315,"score_spread":0.24441568849707138,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3111143154","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.001074456,0.71353096,0.003038817,0.009718207,0.08622279,0.000050900366,0.0025154531,0.00059863937,0.18324979],"genre_scores_gemma":[0.007204996,0.32186034,0.0032776021,0.0015468452,0.014085436,0.00006684529,0.0017341234,0.00076127105,0.6494625],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997485,0.00004345681,0.000022796281,0.00008047996,0.00008566858,0.000019046587],"domain_scores_gemma":[0.9995146,0.00017186462,0.000051729847,0.000039683953,0.00013522565,0.000086973254],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004337669,0.0018119325,0.0011701883,0.0029845608,0.0007137406,0.0025880372,0.00076029415,0.0007448072,0.14849898],"category_scores_gemma":[0.0012406152,0.00045597172,0.00047054622,0.0025488168,0.0007784223,0.0023293707,0.0014694688,0.0019753068,0.07272878],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048404127,0.000017118378,0.000077772675,0.0007934639,0.000009763771,0.00008126399,0.0002882503,0.00021676309,0.0005951451,0.0049659223,0.8063561,0.18655007],"study_design_scores_gemma":[0.0000018056492,0.0000061579804,0.00016595822,0.00023926102,0.0000024256894,0.00016892783,0.000045045206,0.000022256354,0.00005405497,0.00070524606,0.9985858,0.000003042273],"about_ca_topic_score_codex":0.0030090327,"about_ca_topic_score_gemma":0.0059982915,"teacher_disagreement_score":0.14849898,"about_ca_system_score_codex":0.00083162414,"about_ca_system_score_gemma":0.001308716,"threshold_uncertainty_score":0.4967786},"labels":[],"label_agreement":null},{"id":"W3111874766","doi":"10.1016/s2666-5247(20)30176-2","title":"How a microbe becomes a pandemic: a new story of the Black Death","year":2020,"lang":"en","type":"article","venue":"The Lancet Microbe","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Yersinia pestis; Plague (disease); Genealogy; History; Pandemic; Outbreak; Ancient history; Ethnology; Biology; Geography; Medicine; Virology; Disease; Coronavirus disease 2019 (COVID-19); Genetics; Infectious disease (medical specialty); Pathology","score_opus":0.054291977924491565,"score_gpt":0.28259077655163733,"score_spread":0.22829879862714578,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3111874766","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.022044186,0.14841594,0.0028176561,0.7623477,0.02713454,0.000029450202,0.0011753627,0.00016750443,0.0358677],"genre_scores_gemma":[0.39196554,0.21774651,0.005334778,0.29100806,0.022081459,0.000115595736,0.0012139472,0.0007127654,0.06982132],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983247,0.0008231921,0.00006635311,0.0002040945,0.0003012848,0.00028023598],"domain_scores_gemma":[0.9961481,0.0022973036,0.0002788828,0.00023458633,0.0004059118,0.0006353172],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0043096165,0.000966922,0.0007444084,0.0015013996,0.0070545273,0.0064875656,0.001086008,0.006237084,0.0064464286],"category_scores_gemma":[0.008856625,0.00048327885,0.00076538563,0.0010186252,0.010373775,0.012740845,0.0055424715,0.011479252,0.0015059278],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047441796,0.00005045206,0.0028798415,0.0010888614,0.000152003,0.003986321,0.086515754,0.00030854202,0.001538431,0.12202894,0.6496531,0.13132331],"study_design_scores_gemma":[0.000017217008,0.00006027055,0.0010504286,0.0009905691,0.00003607492,0.0008983558,0.019186888,0.000086095875,0.00048394443,0.030775402,0.9463597,0.000055151933],"about_ca_topic_score_codex":0.009925785,"about_ca_topic_score_gemma":0.018099347,"teacher_disagreement_score":0.009925785,"about_ca_system_score_codex":0.0033134618,"about_ca_system_score_gemma":0.0031967224,"threshold_uncertainty_score":0.024040997},"labels":[],"label_agreement":null},{"id":"W3112078660","doi":"10.1093/jmammal/gyaa100","title":"Obituary: Thomas Henry Kunz (1938–2020)","year":2020,"lang":"en","type":"article","venue":"Journal of Mammalogy","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Obituary; Philosophy; Environmental ethics; Theology","score_opus":0.016698349204652074,"score_gpt":0.273742709053892,"score_spread":0.2570443598492399,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3112078660","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0013049437,0.026957456,0.001174184,0.11962567,0.31490856,0.00021998488,0.025206478,0.0031369184,0.5074658],"genre_scores_gemma":[0.0015452355,0.001918156,0.00016730564,0.0031837781,0.005688349,0.000030121348,0.0017985466,0.00036213297,0.98530626],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99953544,0.000056161105,0.000030007799,0.00008566544,0.00022632776,0.00006641179],"domain_scores_gemma":[0.99857664,0.00017584358,0.00010706359,0.00009282509,0.0007331108,0.0003145313],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008606969,0.00087371183,0.00061950204,0.0016631307,0.0019044906,0.0025422343,0.000748409,0.0015643284,0.5219106],"category_scores_gemma":[0.0041440194,0.00037294065,0.0003500224,0.0010225348,0.00053587684,0.0020464484,0.0024879612,0.0023443298,0.42322084],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015791948,0.0000018080666,0.000028147197,0.00002225136,7.9391936e-7,0.000022591645,0.000011302185,0.000008622628,0.000036825564,0.00041197782,0.99332654,0.006113342],"study_design_scores_gemma":[0.000002087843,0.000003398296,0.00016664607,0.000027734326,6.009147e-7,0.000020416102,0.000013951428,0.000005618885,0.00003915328,0.00012684404,0.9995912,0.000002323199],"about_ca_topic_score_codex":0.0082220845,"about_ca_topic_score_gemma":0.014817776,"teacher_disagreement_score":0.5219106,"about_ca_system_score_codex":0.0014297413,"about_ca_system_score_gemma":0.0011445077,"threshold_uncertainty_score":0.6819365},"labels":[],"label_agreement":null},{"id":"W3116108534","doi":"10.1016/j.bpj.2020.12.015","title":"Correlating the Structure and Activity of Y. pestis Ail in a Bacterial Cell Envelope","year":2020,"lang":"en","type":"article","venue":"Biophysical Journal","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Biomedical Imaging and Bioengineering; National Institute of General Medical Sciences; National Institutes of Health; National Cancer Institute; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Yersinia pestis; Bacterial outer membrane; Cell envelope; Virulence; Biology; Escherichia coli; Bacterial cell structure; Inner membrane; Function (biology); Vitronectin; Human pathogen; Membrane protein; Cell biology; Biophysics; Microbiology; Computational biology; Bacteria; Membrane; Cell; Biochemistry; Genetics; Gene","score_opus":0.011865044082494969,"score_gpt":0.2504626482788304,"score_spread":0.23859760419633544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3116108534","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978676,0.00037385928,0.000784427,0.000096337535,0.0000065454997,0.0000054576326,0.000117814794,0.0000086254795,0.0007392745],"genre_scores_gemma":[0.9975992,0.00017971019,0.0006433423,0.000043502478,0.0000047304943,0.000005470143,0.0005911836,0.0000056143017,0.0009272283],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992347,0.000013383394,0.0000044140693,0.000014070329,0.000018794883,0.000025881687],"domain_scores_gemma":[0.99984956,0.000043063723,0.000032299995,0.000014143333,0.00003443012,0.000026458727],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016629847,0.00016896115,0.0001314375,0.00018574536,0.00020271502,0.0005275483,0.00018206082,0.0002232575,0.00075990445],"category_scores_gemma":[0.00030689634,0.00012620483,0.00017079557,0.00025261316,0.0002450396,0.00035041056,0.00016585001,0.0005023051,0.0003396845],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018792621,0.000031905693,0.0013181022,0.00001657228,0.0000062130343,0.00006290533,0.00003431247,0.00016753969,0.99727243,0.00016936465,0.000036434565,0.0006963354],"study_design_scores_gemma":[0.000017760718,0.00018470507,0.023236467,0.000007970509,0.000015727233,0.0002011355,0.00017887025,0.0047944756,0.96931934,0.00013716379,0.0018993033,0.0000070272913],"about_ca_topic_score_codex":0.0013166369,"about_ca_topic_score_gemma":0.0008503011,"teacher_disagreement_score":0.0013166369,"about_ca_system_score_codex":0.0005121754,"about_ca_system_score_gemma":0.00017137223,"threshold_uncertainty_score":0.0037161708},"labels":[],"label_agreement":null},{"id":"W3119648458","doi":"","title":"La peste à Rouen à la fin du Moyen Âge. Résultats préliminaires du diagnostic archéologique et projet de fouille programmée de l’aître Saint-Maclou à Rouen (76)","year":2017,"lang":"fr","type":"article","venue":"HAL (Le Centre pour la Communication Scientifique Directe)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Humanities; Art","score_opus":0.013837593465914972,"score_gpt":0.2703472776026889,"score_spread":0.25650968413677394,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3119648458","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9789823,0.004283892,0.0010489427,0.0002517042,0.00004336458,0.00011041402,0.0013094577,0.000075970085,0.013893988],"genre_scores_gemma":[0.9775522,0.0024337207,0.0018598399,0.0001464968,0.000015023647,0.000060456507,0.0014258127,0.000013843179,0.016492628],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991229,0.0001470757,0.000031221214,0.0001863313,0.00018814372,0.00032433873],"domain_scores_gemma":[0.9990802,0.00013929496,0.00009140372,0.00004120427,0.00053684844,0.00011106305],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010536707,0.00052469864,0.0004223305,0.0006699625,0.0007654287,0.0011774175,0.00040872226,0.0006666848,0.0023995235],"category_scores_gemma":[0.0011703304,0.00021702483,0.00048741812,0.00061152823,0.0005496471,0.0005354176,0.0004402597,0.00042211174,0.0010693244],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021218362,0.00032722813,0.67159516,0.00048659137,0.00020458254,0.0024841533,0.004224996,0.0011830697,0.16851029,0.00094852265,0.0019181024,0.14599553],"study_design_scores_gemma":[0.00002391059,0.0018853324,0.93129003,0.00009472384,0.00010541691,0.0011333115,0.0031551328,0.00033505433,0.037400335,0.00009207403,0.024445143,0.000039470313],"about_ca_topic_score_codex":0.14691538,"about_ca_topic_score_gemma":0.2009195,"teacher_disagreement_score":0.14691538,"about_ca_system_score_codex":0.0026765256,"about_ca_system_score_gemma":0.0014164068,"threshold_uncertainty_score":0.29212046},"labels":[],"label_agreement":null},{"id":"W3121012852","doi":"10.1139/cjz-2020-0054","title":"Reproductive phenology and seasonal mass dynamics of black-tailed prairie dogs (<i>Cynomys ludovicianus</i>) at their northern range limit","year":2021,"lang":"en","type":"article","venue":"Canadian Journal of Zoology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Parks Canada","keywords":"Cynomys ludovicianus; Biology; Hibernation (computing); Phenology; Population; Ecology; Torpor; Range (aeronautics); Reproduction; Intraspecific competition; Overwintering; Reproductive success; Zoology; Prairie dog; Demography","score_opus":0.009843570184272496,"score_gpt":0.22468248101129934,"score_spread":0.21483891082702683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3121012852","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9998963,0.000013493088,0.000007302803,0.0000016892462,1.3409422e-7,7.0460044e-7,0.000021660906,5.651638e-7,0.000058123915],"genre_scores_gemma":[0.99975497,0.000013875131,0.000039676204,0.0000039682195,8.056401e-7,0.0000023578218,0.0000792731,5.5967297e-7,0.00010450685],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99993575,0.000010995886,0.000003581798,0.000023732664,0.000008272284,0.000017669481],"domain_scores_gemma":[0.9997446,0.00003016093,0.00012328466,0.000011903997,0.000025302772,0.00006484915],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018010629,0.00010982021,0.00013452324,0.0005219663,0.0002169551,0.00024421324,0.000188061,0.00012891291,0.00048453515],"category_scores_gemma":[0.0003230097,0.000113667316,0.000091597445,0.00022575381,0.00030582966,0.00016241087,0.00020534827,0.00015913055,0.000096098374],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012803744,0.00008056935,0.9788189,0.000007723515,0.000022468408,0.000108812565,0.0006248309,0.00011845424,0.017633464,0.000026102167,0.00006031932,0.002370304],"study_design_scores_gemma":[6.2030875e-7,0.000032064847,0.9997087,4.2754164e-7,0.0000018179229,0.000036532696,0.00006901163,0.00006115906,0.000067005334,0.0000030619183,0.000018991797,6.287951e-7],"about_ca_topic_score_codex":0.00838985,"about_ca_topic_score_gemma":0.02466478,"teacher_disagreement_score":0.99161017,"about_ca_system_score_codex":0.00032559753,"about_ca_system_score_gemma":0.000108169865,"threshold_uncertainty_score":0.016682029},"labels":[],"label_agreement":null},{"id":"W3121924396","doi":"10.1371/journal.pntd.0009114","title":"Pulse-Controlled Amplification–A new powerful tool for on-site diagnostics under resource limited conditions","year":2021,"lang":"en","type":"article","venue":"PLoS neglected tropical diseases","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Defence Research and Development Canada","funders":"","keywords":"Yersinia pestis; Molecular diagnostics; Polymerase chain reaction; Nucleic acid; Nanotechnology; Digital polymerase chain reaction; Computational biology; Biological system; Computer science; Biology; Materials science; Bioinformatics; Genetics","score_opus":0.018127450465694805,"score_gpt":0.28330895508587495,"score_spread":0.26518150462018014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3121924396","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.050582398,0.016631547,0.91245383,0.0018926746,0.0011512686,0.00037247548,0.000626187,0.004709643,0.011579944],"genre_scores_gemma":[0.37524253,0.015877249,0.5867422,0.0019178073,0.0008713959,0.0010905536,0.0011200332,0.0005858651,0.01655238],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985758,0.0002490018,0.00004385496,0.0003332934,0.00071767694,0.00008039191],"domain_scores_gemma":[0.99921334,0.0003092215,0.00013838503,0.00013375387,0.0001496065,0.000055594646],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00096281833,0.0008104518,0.0005958731,0.0007830264,0.00033817312,0.0010644632,0.0012161349,0.0010715608,0.004055166],"category_scores_gemma":[0.0013742128,0.00046866838,0.00047556727,0.00045738963,0.001163285,0.0012928292,0.0009911328,0.0020344916,0.0021186601],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000091960006,0.00004161888,0.00022885451,0.0002839359,0.000020944397,0.0001338434,0.00006184505,0.00044626722,0.94505745,0.0033712354,0.0016816559,0.04858038],"study_design_scores_gemma":[0.00003482875,0.00044980829,0.00068748667,0.000095771815,0.00005091236,0.001391702,0.000052363637,0.01281667,0.91136163,0.0035813637,0.06940591,0.00007153433],"about_ca_topic_score_codex":0.00018769984,"about_ca_topic_score_gemma":0.0002072739,"teacher_disagreement_score":0.004055166,"about_ca_system_score_codex":0.0004876137,"about_ca_system_score_gemma":0.00046038642,"threshold_uncertainty_score":0.013565898},"labels":[],"label_agreement":null},{"id":"W3132830006","doi":"10.1101/2021.02.10.20249093","title":"The Milano Sforza Registers of the Dead: Health Policies in Italian Renaissance","year":2021,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"TheMuseum","funders":"","keywords":"Plague (disease); The Renaissance; History; Institution; Political science; Humanities; Geography; Economic history; Genealogy; Demography; Ancient history; Art; Sociology; Law; Art history","score_opus":0.026579409090531622,"score_gpt":0.32100608516478457,"score_spread":0.29442667607425294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3132830006","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.64947206,0.034766514,0.0016929971,0.07331507,0.00097412703,0.00026930892,0.03153828,0.00057230686,0.20739922],"genre_scores_gemma":[0.9166934,0.0063161594,0.0013148411,0.0019590196,0.0014844554,0.00017249906,0.013998574,0.0001422312,0.057918847],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99764496,0.00082214735,0.00018370437,0.0003297656,0.0005333119,0.0004860892],"domain_scores_gemma":[0.9937902,0.0016129412,0.002161351,0.0008409798,0.00091601704,0.0006784603],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0037569606,0.00026221058,0.00030682026,0.0062081283,0.0009278304,0.0025492047,0.0007216924,0.0007807967,0.008706021],"category_scores_gemma":[0.007347941,0.00027033815,0.0001887368,0.0056840717,0.0015727937,0.001158302,0.0021380587,0.00065233296,0.0018181155],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009017511,0.00021059213,0.22561659,0.0013563081,0.00007243518,0.0011325506,0.03047919,0.0013967814,0.0024052039,0.09302605,0.36508286,0.27831972],"study_design_scores_gemma":[0.000028428736,0.00010751713,0.45083117,0.0003520503,0.000022506725,0.00032930533,0.0033311306,0.0003104502,0.000574305,0.001348025,0.5427234,0.000041729352],"about_ca_topic_score_codex":0.051162306,"about_ca_topic_score_gemma":0.034248013,"teacher_disagreement_score":0.051162306,"about_ca_system_score_codex":0.005483444,"about_ca_system_score_gemma":0.003125496,"threshold_uncertainty_score":0.101729035},"labels":[],"label_agreement":null},{"id":"W3133719744","doi":"10.1111/febs.15794","title":"Structural biology of the invasion arsenal of Gram-negative bacterial pathogens.","year":2022,"lang":"en","type":"article","venue":"PubMed","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research","keywords":"Effector; Structural biology; Function (biology); Secretion; Host (biology); Virulence; Gene knockout; Chaperone (clinical); Model organism","score_opus":0.021469852344556485,"score_gpt":0.2457671839284077,"score_spread":0.22429733158385123,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3133719744","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.64387125,0.25711012,0.04813566,0.007948572,0.0010085487,0.00011840829,0.00082151993,0.00064775086,0.040338237],"genre_scores_gemma":[0.9105543,0.061814323,0.013776639,0.0009805039,0.00017945553,0.000047824808,0.0016645514,0.000044212244,0.010938201],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99988997,0.000018389464,0.000005296887,0.00002005796,0.00004826996,0.000018062265],"domain_scores_gemma":[0.999905,0.000013202161,0.000024524808,0.0000070983665,0.000020450112,0.00002965301],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020211941,0.00054924644,0.00026701423,0.0003221151,0.00043254075,0.00058912346,0.00027964168,0.00053681794,0.001218263],"category_scores_gemma":[0.00014638396,0.00016733348,0.00026836997,0.00024324236,0.0004444905,0.00066442706,0.00035640242,0.00077001064,0.0006821933],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008565625,0.00003449569,0.00089059694,0.00048329754,0.000019236692,0.0003351451,0.00010726173,0.0007720922,0.96761256,0.0110220425,0.00085438695,0.017783098],"study_design_scores_gemma":[0.00003221817,0.0011433755,0.033661604,0.0002197171,0.00010760949,0.011376478,0.00060316245,0.008949467,0.69641584,0.026657457,0.22074153,0.00009161181],"about_ca_topic_score_codex":0.00033436914,"about_ca_topic_score_gemma":0.00045692027,"teacher_disagreement_score":0.001218263,"about_ca_system_score_codex":0.00052949786,"about_ca_system_score_gemma":0.00044951338,"threshold_uncertainty_score":0.0040754676},"labels":[],"label_agreement":null},{"id":"W3134757501","doi":"10.21203/rs.3.rs-257679/v1","title":"Plasmids facilitate pathogenicity, not cooperation, in bacteria","year":2021,"lang":"en","type":"preprint","venue":"Research Square","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Biotechnology and Biological Sciences Research Council; Natural Sciences and Engineering Research Council of Canada","keywords":"Pathogenicity; Plasmid; Pathogenicity island; Bacteria; Biology; Genetics; Computational biology; Microbiology; Gene","score_opus":0.07602643810638682,"score_gpt":0.38488493541702096,"score_spread":0.30885849731063414,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3134757501","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99269694,0.00071702263,0.0038092716,0.00022112417,0.00001695349,0.000011249225,0.00004976074,0.000040477542,0.0024371664],"genre_scores_gemma":[0.99868935,0.00019136933,0.0006560194,0.000018017949,0.00000707313,0.0000035918895,0.00004245315,0.0000026918433,0.00038946857],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996904,0.00007985007,0.000015536509,0.000043679815,0.00009630499,0.00007431604],"domain_scores_gemma":[0.99870193,0.0006471788,0.00032797392,0.00008901717,0.00011235326,0.000121420286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042039447,0.00026165342,0.00027570437,0.00067327364,0.00042841322,0.0007013124,0.00014538795,0.00049480156,0.002590457],"category_scores_gemma":[0.0016227306,0.0001143507,0.00020709827,0.00053348637,0.0008294378,0.0007325194,0.00073988736,0.00039361668,0.0004381738],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005583086,0.00021217474,0.07775198,0.0007350651,0.00009245162,0.0017798054,0.0007430181,0.003857493,0.85845643,0.014159991,0.0006354977,0.041017845],"study_design_scores_gemma":[0.0002690635,0.0031619112,0.4025722,0.00019403866,0.00031485164,0.015088015,0.0038781352,0.023176344,0.4624709,0.06388811,0.024861744,0.0001246312],"about_ca_topic_score_codex":0.00038214886,"about_ca_topic_score_gemma":0.00025531685,"teacher_disagreement_score":0.002590457,"about_ca_system_score_codex":0.00038226604,"about_ca_system_score_gemma":0.0004356204,"threshold_uncertainty_score":0.008665919},"labels":[],"label_agreement":null},{"id":"W3136563680","doi":"10.3138/cart-2020-0024","title":"Using Topological Maps to Explore the COVID-19 Pandemic in Canada","year":2021,"lang":"fr","type":"article","venue":"Cartographica The International Journal for Geographic Information and Geovisualization","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Humanities; Geography; Political science; Art","score_opus":0.07522542921575166,"score_gpt":0.3752998971109572,"score_spread":0.30007446789520553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3136563680","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91198164,0.0022974147,0.010196599,0.0028276076,0.000074376214,0.00020272091,0.03001752,0.00093064335,0.041471537],"genre_scores_gemma":[0.96942544,0.0011369681,0.013990778,0.00011485715,0.000016489841,0.000058752765,0.010043959,0.00008840196,0.0051241987],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99973327,0.000044934903,0.00000792916,0.000038765505,0.00006837844,0.000106628984],"domain_scores_gemma":[0.99922276,0.00023439054,0.00007345761,0.000038884744,0.00030314663,0.0001272671],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003695033,0.0004563942,0.00030556793,0.0066857347,0.0019651551,0.0029515717,0.0005668906,0.00039890193,0.0038361826],"category_scores_gemma":[0.0025119341,0.00020726993,0.0005900433,0.008223102,0.0009075319,0.000785069,0.001333838,0.00042923304,0.00033441916],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047441255,0.0001266251,0.583451,0.0004690975,0.00034749633,0.0008948956,0.006141592,0.15415294,0.0019147947,0.0367521,0.04967403,0.16560109],"study_design_scores_gemma":[0.00007974144,0.00007126855,0.47292402,0.00032324987,0.00025518113,0.000262294,0.03058337,0.37667933,0.0009436211,0.018334622,0.09934921,0.00019421006],"about_ca_topic_score_codex":0.98480207,"about_ca_topic_score_gemma":0.98936325,"teacher_disagreement_score":0.016429974,"about_ca_system_score_codex":0.016429974,"about_ca_system_score_gemma":0.01819597,"threshold_uncertainty_score":0.119208395},"labels":[],"label_agreement":null},{"id":"W3137843134","doi":"10.1101/2021.03.20.21254005","title":"Alternative splicing of <i>OAS1</i> alters the risk for severe COVID-19","year":2021,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"National Center for Advancing Translational Sciences; Medical Research Council; Perelman School of Medicine, University of Pennsylvania; National Institutes of Health; Public Health Agency; European Commission; Jeanssons Stiftelser; King's College London; Fonds de Recherche du Québec - Santé; University of Pennsylvania Health System; University of Pennsylvania; Georgia Clinical and Translational Science Alliance; Canadian Institutes of Health Research; Compute Canada; Japan Society for the Promotion of Science; Cancer Research UK; Public Health Agency of Canada; McGill University; Jewish General Hospital; National Institute for Health and Care Research; Regeneron Pharmaceuticals","keywords":"Locus (genetics); Haplotype; Genetics; Biology; Coronavirus disease 2019 (COVID-19); Neanderthal; Allele; Gene; Geography; Medicine; Disease; Infectious disease (medical specialty)","score_opus":0.029927668613652533,"score_gpt":0.33108949795051934,"score_spread":0.3011618293368668,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3137843134","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99802846,0.00015315413,0.0006045219,0.00006460449,0.000014454002,0.000004606143,0.0005281384,0.000019985213,0.0005821878],"genre_scores_gemma":[0.9982305,0.00008007371,0.00033460755,0.000036043202,0.000009205715,0.0000034675488,0.00047256582,0.000019681605,0.00081394514],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990165,0.000023261211,0.000009094881,0.000028341565,0.000016596206,0.00002107008],"domain_scores_gemma":[0.99981314,0.000034733464,0.000086402666,0.0000157879,0.00001021954,0.000039721064],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012714423,0.00029058885,0.00015674483,0.00028436634,0.00015529791,0.000306312,0.00012506686,0.0003218232,0.0043406095],"category_scores_gemma":[0.00026335203,0.000098467164,0.00023495384,0.00019347588,0.00025919135,0.00009299878,0.0001981294,0.00028956225,0.0005405147],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015708759,0.000059113572,0.070551924,0.00004179166,0.00009731793,0.0008345664,0.00008862978,0.00016709174,0.9216717,0.0003433454,0.00043177963,0.0041418006],"study_design_scores_gemma":[0.00013048864,0.0009002205,0.8123766,0.000041396797,0.00017655146,0.006013983,0.00032344687,0.0014014597,0.1717574,0.0009102511,0.005940685,0.000027477687],"about_ca_topic_score_codex":0.0007233484,"about_ca_topic_score_gemma":0.0004381765,"teacher_disagreement_score":0.0043406095,"about_ca_system_score_codex":0.000100450816,"about_ca_system_score_gemma":0.00006205725,"threshold_uncertainty_score":0.014520824},"labels":[],"label_agreement":null},{"id":"W3137953098","doi":"10.1017/s2058631021000064","title":"The Plague of Athens Shedding Light on Modern Struggles with COVID-19","year":2021,"lang":"en","type":"article","venue":"The journal of classics teaching","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Plague (disease); Humanity; Pandemic; Feeling; Population; History; Natural (archaeology); Environmental ethics; Diversity (politics); Coronavirus disease 2019 (COVID-19); Sociology; Political science; Ancient history; Law; Demography; Disease; Psychology; Medicine; Philosophy; Infectious disease (medical specialty); Social psychology","score_opus":0.01589668017025687,"score_gpt":0.3021393009276746,"score_spread":0.28624262075741774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3137953098","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4780338,0.12505525,0.0007187622,0.09121664,0.0047346763,0.000021123811,0.00013007197,0.000061386425,0.30002823],"genre_scores_gemma":[0.94565386,0.018037466,0.00044084477,0.009909439,0.0016961398,0.000013810574,0.00004081108,0.000025824887,0.024181783],"study_design_codex":"qualitative","study_design_gemma":"not_applicable","domain_scores_codex":[0.99932873,0.0003246058,0.000022442464,0.00008290351,0.00008655431,0.0001547482],"domain_scores_gemma":[0.99976283,0.00008341754,0.000039872586,0.000034571374,0.000027219045,0.000052107756],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012740066,0.0006411536,0.0004282172,0.001240412,0.008371289,0.0044303965,0.0005140709,0.003150548,0.0033654082],"category_scores_gemma":[0.0010198909,0.00022600987,0.0002875833,0.00052595494,0.011678499,0.004268674,0.005001606,0.0028022951,0.00060204504],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014886912,0.00007510093,0.0042495183,0.00042511316,0.0000714647,0.0049523124,0.49517038,0.00019199672,0.0019590885,0.37279066,0.05823274,0.06173282],"study_design_scores_gemma":[0.000006918525,0.00007253405,0.010222544,0.00062588067,0.000016545508,0.0029632794,0.093901545,0.000081296515,0.00034107495,0.031147273,0.8605735,0.00004762755],"about_ca_topic_score_codex":0.0055078245,"about_ca_topic_score_gemma":0.011155732,"teacher_disagreement_score":0.008371289,"about_ca_system_score_codex":0.0030425119,"about_ca_system_score_gemma":0.001134952,"threshold_uncertainty_score":0.022075117},"labels":[],"label_agreement":null},{"id":"W3145081071","doi":"10.1017/rqx.2020.363","title":": <i>Life in a Time of Pestilence: The Great Castilian Plague of 1596–1601</i>","year":2021,"lang":"en","type":"article","venue":"Renaissance Quarterly","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"","keywords":"Plague (disease); Content (measure theory); History; Ancient history; Mathematics","score_opus":0.011186673151101428,"score_gpt":0.2620966514721863,"score_spread":0.25090997832108486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3145081071","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.01513362,0.0961375,0.0019966227,0.24532956,0.10787205,0.000104849954,0.004535745,0.0010826603,0.5278074],"genre_scores_gemma":[0.07959883,0.04548552,0.0020959622,0.034286678,0.024225581,0.00006350936,0.004168348,0.00044495356,0.80963063],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99987555,0.00002515738,0.0000107472215,0.000018946948,0.000048121725,0.000021490807],"domain_scores_gemma":[0.99976605,0.000051377912,0.000030424473,0.000016598768,0.00006825422,0.000067337685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054633536,0.00036336848,0.00015124313,0.00072658726,0.00089382706,0.0018183931,0.00036190596,0.00119473,0.028576484],"category_scores_gemma":[0.00085930584,0.000095724856,0.00009300871,0.00053752784,0.0008692179,0.0008980408,0.00058813824,0.0012102097,0.009050401],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059006656,0.000009021512,0.0007959459,0.00023996469,0.000004644301,0.00014584982,0.00051910605,0.000022084088,0.0011527915,0.0044500274,0.9498726,0.04272904],"study_design_scores_gemma":[0.0000020909001,0.000013178499,0.005280356,0.000114478935,0.000002111858,0.0001481264,0.00029014054,0.000009858837,0.000271822,0.00034128924,0.9935221,0.000004339583],"about_ca_topic_score_codex":0.013254864,"about_ca_topic_score_gemma":0.044808827,"teacher_disagreement_score":0.028576484,"about_ca_system_score_codex":0.0012754884,"about_ca_system_score_gemma":0.00053896155,"threshold_uncertainty_score":0.09559792},"labels":[],"label_agreement":null},{"id":"W3157996016","doi":"10.58809/fhef6946","title":"The Influence of Landscape Factors on Black-Tailed Prairie Dog (Cynomys ludovicianus) Colony Persistence in Northwest Kansas","year":2020,"lang":"en","type":"dissertation","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Directorate for Biological Sciences","keywords":"Cynomys ludovicianus; Prairie dog; Geography; Ecology; Occupancy; Wildlife refuge; Biology; Wildlife","score_opus":0.01226855490101462,"score_gpt":0.27348005837904377,"score_spread":0.26121150347802913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3157996016","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996457,0.000063677035,0.00002521317,0.000018221328,8.5824865e-7,0.0000012746032,0.00008076013,0.0000014105882,0.00016288484],"genre_scores_gemma":[0.99970657,0.000036293495,0.000046737652,0.0000075864755,8.714713e-7,0.0000014971018,0.00011869882,8.2611444e-7,0.00008093584],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99978966,0.000037958805,0.000015405773,0.000058192698,0.00003310497,0.000065701555],"domain_scores_gemma":[0.99884593,0.00014061743,0.00061306515,0.000039975646,0.00016912661,0.00019132304],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000291544,0.00012446048,0.00012990665,0.00049174717,0.00039310052,0.0007444155,0.00036615785,0.00018670618,0.0006149746],"category_scores_gemma":[0.0010351104,0.00011600548,0.00019958634,0.0005462202,0.0003826607,0.00035733258,0.00050083926,0.00027958787,0.00006487759],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021869479,0.000019357516,0.99731296,0.000007374549,0.000030560976,0.000052467603,0.00033442018,0.00016463226,0.00030538408,0.000017811497,0.00008593619,0.0016471371],"study_design_scores_gemma":[3.6642487e-7,0.000007831021,0.9993575,0.0000036662254,0.0000059180516,0.000012744295,0.00039162257,0.00011357319,0.000016522868,0.0000028075285,0.00008647966,0.0000010577737],"about_ca_topic_score_codex":0.20220536,"about_ca_topic_score_gemma":0.49834836,"teacher_disagreement_score":0.20220536,"about_ca_system_score_codex":0.0011285116,"about_ca_system_score_gemma":0.00056475354,"threshold_uncertainty_score":0.4020568},"labels":[],"label_agreement":null},{"id":"W3158615491","doi":"10.1101/2021.04.14.439553","title":"Palaeogenomic analysis of black rat ( <i>Rattus rattus</i> ) reveals multiple European introductions associated with human economic history","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University; University of British Columbia","funders":"Max-Planck-Institut für Menschheitsgeschichte; University of Oxford; Henan Institute of Science and Technology; Universitat de Barcelona; Ministerio de Ciencia e Innovación; Arts and Humanities Research Council; Akademie Věd České Republiky","keywords":"Biological dispersal; Plague (disease); Population; Ancient DNA; Demographic history; Rodent; Mediterranean climate; Geography; Biology; Zoology; Ecology; Demography; Genetic diversity; Archaeology","score_opus":0.014703835725827582,"score_gpt":0.22499469250057952,"score_spread":0.21029085677475193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3158615491","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99625695,0.000296742,0.0014691985,0.00004299017,0.0000063797374,0.0000047419,0.00115665,0.000029215966,0.00073707115],"genre_scores_gemma":[0.9924959,0.0003080656,0.00240484,0.000047229696,0.00001045574,0.000009149993,0.0037859306,0.000032863965,0.0009055955],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999274,0.000011786038,0.0000030145925,0.000029195608,0.000010490821,0.000018142373],"domain_scores_gemma":[0.99982196,0.000031907803,0.000084119914,0.000016438426,0.000021902217,0.00002359326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018281353,0.00017428673,0.00015319501,0.0007386527,0.00019660623,0.00028467015,0.00009091832,0.00019034506,0.0012715207],"category_scores_gemma":[0.00021845358,0.00010454737,0.0002773458,0.00048014315,0.0001529116,0.00009372409,0.00024870722,0.00028076826,0.00029314804],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00068316894,0.000060096932,0.14874944,0.00014635909,0.0002245788,0.00036997945,0.0004605865,0.0010545298,0.8184377,0.0005564571,0.00038309547,0.028874047],"study_design_scores_gemma":[0.000010465708,0.00009527741,0.97490376,0.000028928293,0.00007755039,0.0004219296,0.0001777216,0.0016118896,0.017766617,0.00019027544,0.004704481,0.00001111963],"about_ca_topic_score_codex":0.0018646368,"about_ca_topic_score_gemma":0.003733215,"teacher_disagreement_score":0.0018646368,"about_ca_system_score_codex":0.00012612893,"about_ca_system_score_gemma":0.000101592035,"threshold_uncertainty_score":0.004253626},"labels":[],"label_agreement":null},{"id":"W3164771015","doi":"10.1139/cjm-2021-0025","title":"CspB and CspC are induced upon cold shock in <i>Bacillus cereus</i> strain D2","year":2021,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Cold-shock domain; Bacillus cereus; Cereus; Biology; Strain (injury); Shock (circulatory); Heat shock protein; Context (archaeology); Microbiology; Chemistry; Bacteria; Gene; Biochemistry; Genetics; RNA","score_opus":0.013807226775244865,"score_gpt":0.24067072994989133,"score_spread":0.22686350317464646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3164771015","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99364966,0.0010274234,0.0019290167,0.00015838849,0.000039487684,0.000028613991,0.0018747806,0.00013152398,0.0011612292],"genre_scores_gemma":[0.98705184,0.00055523484,0.0025824562,0.00016524078,0.000021186188,0.00007881967,0.0054644407,0.00009757903,0.0039832033],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99958163,0.000047378453,0.000037392474,0.000085149564,0.000141474,0.00010701764],"domain_scores_gemma":[0.9995121,0.000041116822,0.00016012846,0.000046160552,0.00008439529,0.00015620353],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017037836,0.0006724899,0.0004927656,0.00039553558,0.0002455204,0.00050905754,0.00020837624,0.0003701,0.0010833895],"category_scores_gemma":[0.00034581948,0.00023245577,0.00046577788,0.0005080962,0.00023865979,0.00018352908,0.00061133504,0.00068057637,0.0006046074],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010827994,0.000018687208,0.00023130428,0.00002357666,0.0000038417174,0.000037329406,0.000017500897,0.000016133996,0.9991756,0.000014457841,0.000038443068,0.00031478508],"study_design_scores_gemma":[0.00003094131,0.00034828138,0.039436106,0.000017574732,0.000024800778,0.0004889067,0.00017190707,0.00092008867,0.9541719,0.00006658861,0.004295813,0.00002708015],"about_ca_topic_score_codex":0.0028634341,"about_ca_topic_score_gemma":0.0018605686,"teacher_disagreement_score":0.0028634341,"about_ca_system_score_codex":0.0003617033,"about_ca_system_score_gemma":0.00026788938,"threshold_uncertainty_score":0.0056934953},"labels":[],"label_agreement":null},{"id":"W3166422040","doi":"10.3390/idr13020051","title":"A Case Series of Diarrheal Diseases Associated with Yersinia frederiksenii","year":2021,"lang":"en","type":"article","venue":"Infectious Disease Reports","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"","keywords":"Medicine; Yersinia; Yersinia enterocolitica; Ciprofloxacin; Ampicillin; Microbiology; Diarrhea; Trimethoprim; Antimicrobial; Sulfamethoxazole; Antibiotics; Internal medicine; Biology; Bacteria","score_opus":0.008267399356552416,"score_gpt":0.24932101475290558,"score_spread":0.24105361539635317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3166422040","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96568143,0.009893169,0.0023231783,0.001938918,0.00049116137,0.00023236535,0.00028191227,0.00018979528,0.018968057],"genre_scores_gemma":[0.9934877,0.002755187,0.0010456529,0.00066960783,0.00062656956,0.000035579837,0.00015852707,0.00002341807,0.0011977],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99888223,0.00011534731,0.00020827386,0.00022975457,0.00015634645,0.00040803794],"domain_scores_gemma":[0.99762017,0.0005776381,0.0006666399,0.00027742021,0.00021465257,0.00064345583],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005626131,0.0023344627,0.0010282707,0.0034559006,0.003671787,0.0022717945,0.001320599,0.00356448,0.0024755297],"category_scores_gemma":[0.0040841596,0.0015244293,0.000989304,0.0021827184,0.0019890168,0.0024536874,0.0018014815,0.0025863808,0.0011643908],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042317475,0.00006206471,0.030549338,0.0000493575,0.000016646922,0.9653342,0.00045450777,0.00006584355,0.0005773389,0.00014627604,0.00067187013,0.002030305],"study_design_scores_gemma":[0.000006137474,0.000026545553,0.0048906067,0.000024137105,0.0000137915495,0.99371654,0.00020254073,0.000085175576,0.00021694972,0.000042631575,0.0007652881,0.00000964294],"about_ca_topic_score_codex":0.006929113,"about_ca_topic_score_gemma":0.009953165,"teacher_disagreement_score":0.006929113,"about_ca_system_score_codex":0.0023858163,"about_ca_system_score_gemma":0.001629198,"threshold_uncertainty_score":0.017310321},"labels":[],"label_agreement":null},{"id":"W3168375702","doi":"10.1017/s1047759421000349","title":"The “Plague of Cyprian”: A revised view of the origin and spread of a 3rd-c. CE pandemic","year":2021,"lang":"en","type":"article","venue":"Journal of Roman Archaeology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Princeton University","keywords":"Plague (disease); Timeline; Pandemic; Quarter (Canadian coin); Politics; History; Empire; Outbreak; Ancient history; Epidemic disease; Roman Empire; Coronavirus disease 2019 (COVID-19); Economic history; Geography; Cartography; Genealogy; Disease; Political science; Archaeology; Virology; Medicine; Law; Infectious disease (medical specialty); Pathology","score_opus":0.014989170112020654,"score_gpt":0.2912331126947698,"score_spread":0.27624394258274915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3168375702","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17103747,0.26644713,0.012651726,0.3753761,0.024362048,0.00008168544,0.00041922234,0.0003038918,0.14932075],"genre_scores_gemma":[0.8809788,0.07147598,0.0027493825,0.021644799,0.010782957,0.000030896073,0.00009994675,0.00008800859,0.012149184],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"observational","domain_scores_codex":[0.99899,0.00040686564,0.00010096788,0.00016443532,0.00017786733,0.0001597569],"domain_scores_gemma":[0.99844724,0.00049549044,0.0002807072,0.0002199985,0.00043482985,0.00012179076],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025914072,0.00082648394,0.0006228114,0.0023755457,0.0015404981,0.00666985,0.0013300749,0.0026252675,0.0013141688],"category_scores_gemma":[0.0032744235,0.000258221,0.00040207393,0.0008777396,0.012178147,0.0052582524,0.0018233428,0.0046882485,0.00043504065],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007754186,0.00007402367,0.024235306,0.0018572361,0.00026896375,0.0068187527,0.046745628,0.003502261,0.005957427,0.6461512,0.091850914,0.17176294],"study_design_scores_gemma":[0.000023726265,0.00018441778,0.038042087,0.0032049944,0.00013357644,0.004845791,0.025449643,0.0032164184,0.0029621301,0.136155,0.7855312,0.00025092036],"about_ca_topic_score_codex":0.012450321,"about_ca_topic_score_gemma":0.009692385,"teacher_disagreement_score":0.012450321,"about_ca_system_score_codex":0.0039413837,"about_ca_system_score_gemma":0.0024887328,"threshold_uncertainty_score":0.028596878},"labels":[],"label_agreement":null},{"id":"W3170133210","doi":"10.1503/cmaj.202820-f","title":"Quand le sentiment antivaccin mène à la violence : émeute antivaccination de 1885 à Montréal","year":2021,"lang":"fr","type":"article","venue":"Canadian Medical Association Journal","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Coronavirus disease 2019 (COVID-19); Coronavirus; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); 2019-20 coronavirus outbreak; Humanities; Vaccination; Virology; Medicine; Art; Outbreak; Internal medicine","score_opus":0.00695983298523574,"score_gpt":0.2512830903126231,"score_spread":0.24432325732738733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3170133210","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1633708,0.100339405,0.0061252834,0.14907326,0.016474146,0.00031220226,0.004909376,0.00034446357,0.55905116],"genre_scores_gemma":[0.48909277,0.021654198,0.0016061075,0.013102991,0.0022195524,0.00007889111,0.0006060273,0.00010050336,0.47153902],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"qualitative","domain_scores_codex":[0.99934214,0.00009980504,0.000019555617,0.0001117951,0.00021483409,0.00021186436],"domain_scores_gemma":[0.9993962,0.0000922017,0.00010315196,0.000015578145,0.0002423321,0.00015049714],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000563341,0.00057984045,0.0002073771,0.0007733772,0.0028665725,0.0020619093,0.00051833485,0.0014660368,0.015146767],"category_scores_gemma":[0.0017766452,0.00032823454,0.00033076172,0.00054960646,0.0028646637,0.00084294507,0.000704213,0.0025816837,0.0016149875],"study_design_candidate":"qualitative","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001164732,0.00018622095,0.059832655,0.0013193387,0.00026931323,0.004950123,0.014551893,0.0023336478,0.01766886,0.34990203,0.28226036,0.26556087],"study_design_scores_gemma":[0.000025958136,0.00006720135,0.023946343,0.0000971245,0.000013716914,0.00019884743,0.0005158384,0.00010982267,0.0017253861,0.0010635454,0.9722044,0.000031718006],"about_ca_topic_score_codex":0.8102152,"about_ca_topic_score_gemma":0.88410896,"teacher_disagreement_score":0.18978482,"about_ca_system_score_codex":0.025554098,"about_ca_system_score_gemma":0.016449742,"threshold_uncertainty_score":0.381805},"labels":[],"label_agreement":null},{"id":"W3173380888","doi":"10.1017/rqx.2021.91","title":": <i>Contagion and the Shakespearean Stage</i>","year":2021,"lang":"en","type":"article","venue":"Renaissance Quarterly","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Campion College; University of Regina","funders":"","keywords":"Stage (stratigraphy); Art history; History; Art; Geology; Paleontology","score_opus":0.008578451569444812,"score_gpt":0.2568819565313387,"score_spread":0.2483035049618939,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3173380888","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00097656035,0.85718495,0.00036263952,0.08513977,0.01304162,0.000010112032,0.00008371525,0.000047219295,0.043153517],"genre_scores_gemma":[0.09473202,0.59796405,0.0014063913,0.03719707,0.024004709,0.00007968318,0.00038153678,0.0002414165,0.24399313],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99857426,0.00055584346,0.000070772505,0.00013636646,0.00041441052,0.00024830826],"domain_scores_gemma":[0.9987244,0.00050760584,0.00015194851,0.00008941226,0.00031937842,0.00020717703],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016970694,0.0012449648,0.0008259136,0.0017768837,0.0037983868,0.007782491,0.0012023213,0.004093896,0.028318942],"category_scores_gemma":[0.003912147,0.0004795744,0.00042483883,0.0021635971,0.008327241,0.011717772,0.003400398,0.0037664692,0.008165496],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038615966,0.000012785864,0.00025538827,0.0005593236,0.000012694279,0.00015902381,0.007184032,0.000039927047,0.00014098352,0.05181709,0.8770397,0.062740535],"study_design_scores_gemma":[0.0000033896192,0.000008849787,0.00052717066,0.0006264386,0.000005439041,0.00017010968,0.0026611243,0.000019314253,0.000076086675,0.014146325,0.9817461,0.000009658172],"about_ca_topic_score_codex":0.03295984,"about_ca_topic_score_gemma":0.045789015,"teacher_disagreement_score":0.03295984,"about_ca_system_score_codex":0.004849486,"about_ca_system_score_gemma":0.00474969,"threshold_uncertainty_score":0.09473628},"labels":[],"label_agreement":null},{"id":"W3185171192","doi":"","title":"A late-Holocene reconstruction of forest moth outbreaks in central New Brunswick, Canada","year":2020,"lang":"en","type":"article","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Holocene; Archaeology; Geography; Physical geography; Forestry; Geology","score_opus":0.01180576106368911,"score_gpt":0.2322902598631121,"score_spread":0.220484498799423,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3185171192","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9882449,0.0016887181,0.00022618665,0.0004995092,0.00001955084,0.000037019017,0.004334066,0.000015041988,0.0049350616],"genre_scores_gemma":[0.9943104,0.00080011546,0.00027766492,0.00011158655,0.0000055666355,0.000016077543,0.0020258497,0.000013026176,0.0024396768],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99973327,0.000018829014,0.000014763426,0.000036089823,0.000036427762,0.00016051313],"domain_scores_gemma":[0.9988625,0.00005864951,0.00018643505,0.000026093385,0.0006765609,0.00018967318],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037239035,0.00034935848,0.0003042412,0.0035830066,0.0028035652,0.0017083016,0.0011699827,0.00054138375,0.003341538],"category_scores_gemma":[0.0008974851,0.00031872038,0.0003396382,0.005107549,0.00067429524,0.00044864073,0.0010611604,0.00063312845,0.00032633558],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020991995,0.000048500657,0.9701581,0.00012517654,0.00014039739,0.0006986799,0.0044027516,0.0010385747,0.0030410213,0.0009584955,0.0025610973,0.016617244],"study_design_scores_gemma":[0.0000029067055,0.0000042314464,0.9932747,0.000045908466,0.000013949219,0.000050087696,0.0032198331,0.00029915417,0.00009269008,0.000026656964,0.0029602118,0.000009730114],"about_ca_topic_score_codex":0.9958247,"about_ca_topic_score_gemma":0.9985896,"teacher_disagreement_score":0.029052101,"about_ca_system_score_codex":0.029052101,"about_ca_system_score_gemma":0.021546524,"threshold_uncertainty_score":0.21078873},"labels":[],"label_agreement":null},{"id":"W3193936597","doi":"10.3197/jps.2020.5.1.15","title":"fractal biology of plague and the future of civilization","year":2020,"lang":"en","type":"article","venue":"The Journal of Population and Sustainability","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Population; Plague (disease); Outbreak; Pandemic; Biology; Population growth; Civilization; Homo sapiens; Ecology; Geography; Basic reproduction number; Infectious disease (medical specialty); Evolutionary biology; Demography; Coronavirus disease 2019 (COVID-19); Virology; Disease; Sociology","score_opus":0.007219984978381633,"score_gpt":0.2826654014830678,"score_spread":0.2754454165046862,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3193936597","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39685184,0.07996869,0.104956426,0.119778745,0.0028164363,0.00008566923,0.0007948125,0.00065777526,0.29408965],"genre_scores_gemma":[0.979006,0.007746136,0.004776657,0.00106605,0.000759779,0.000040190273,0.00009982788,0.00003988367,0.006465544],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9997253,0.000085456646,0.0000102085505,0.000052238196,0.00007374238,0.000053005348],"domain_scores_gemma":[0.9987174,0.00047304618,0.00020546866,0.00015018652,0.00020835173,0.0002455627],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007089116,0.00019301871,0.00042941573,0.0012111184,0.00095880276,0.0028205668,0.00031754753,0.0011164837,0.0026038392],"category_scores_gemma":[0.0021754971,0.0001874872,0.00029725648,0.0004266918,0.004571876,0.0029088988,0.0011648101,0.0011596915,0.0003961779],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001509815,0.000008724066,0.0017477046,0.00006361405,0.000019512556,0.00008515788,0.000734098,0.003853301,0.0010920352,0.9707879,0.006593086,0.014999864],"study_design_scores_gemma":[0.000006613792,0.000019395202,0.0040317317,0.000037611997,0.000004445366,0.00018606908,0.0004328369,0.0063016783,0.0001593886,0.9521706,0.036625873,0.000023729825],"about_ca_topic_score_codex":0.0010435992,"about_ca_topic_score_gemma":0.0008518971,"teacher_disagreement_score":0.0028205668,"about_ca_system_score_codex":0.0013911745,"about_ca_system_score_gemma":0.00042914363,"threshold_uncertainty_score":0.010093689},"labels":[],"label_agreement":null},{"id":"W3199855470","doi":"10.3390/ijms22189805","title":"Optimised Heterologous Expression and Functional Analysis of the Yersinia pestis F1-Capsular Antigen Regulator Caf1R","year":2021,"lang":"en","type":"article","venue":"International Journal of Molecular Sciences","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Division of Human Resource Development; Ministry of Education, India","keywords":"Yersinia pestis; Biology; Recombinant DNA; Operon; Electrophoretic mobility shift assay; Molecular biology; Plasmid; Escherichia coli; DNA; Gene; Gene expression; Genetics","score_opus":0.013963268069111709,"score_gpt":0.2870035731437937,"score_spread":0.273040305074682,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3199855470","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942713,0.0008025247,0.0035658292,0.000088044195,0.000010617863,0.0000331257,0.00063700834,0.00006270371,0.0005289238],"genre_scores_gemma":[0.9842588,0.000990446,0.010303321,0.000037305017,0.0000100459,0.00004316185,0.002331417,0.00010441419,0.0019210506],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996811,0.00007659368,0.000036699617,0.00006211649,0.00008666794,0.00005679347],"domain_scores_gemma":[0.99982965,0.000053537125,0.000052125753,0.000018596684,0.000027756769,0.000018325696],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004789015,0.00046180325,0.000496834,0.00021038076,0.00012707297,0.00042796502,0.00030894362,0.00033497534,0.00065953826],"category_scores_gemma":[0.00038670265,0.00015194534,0.00041354648,0.00034918584,0.00024184005,0.00024559977,0.00022719432,0.000599463,0.00042605086],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009782784,0.000035193043,0.00009529583,0.00003459605,0.0000041893795,0.000024749997,0.000021302587,0.00019713544,0.99880433,0.000035077108,0.000014924925,0.0006352886],"study_design_scores_gemma":[0.000013433736,0.00019970341,0.0017025828,0.0000049086734,0.000014431356,0.000122656,0.000027957432,0.0015030944,0.99532807,0.000016704895,0.0010559274,0.000010602462],"about_ca_topic_score_codex":0.0011383942,"about_ca_topic_score_gemma":0.00078688085,"teacher_disagreement_score":0.0011383942,"about_ca_system_score_codex":0.0004696169,"about_ca_system_score_gemma":0.00020673231,"threshold_uncertainty_score":0.0034072995},"labels":[],"label_agreement":null},{"id":"W3200248150","doi":"10.1073/pnas.2100338118","title":"Modern Siberian dog ancestry was shaped by several thousand years of Eurasian-wide trade and human dispersal","year":2021,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; University of Alberta","funders":"FP7 Ideas: European Research Council; Horizon 2020; Natural Environment Research Council; Social Sciences and Humanities Research Council of Canada; Russian Academy of Sciences; Horizon 2020 Framework Programme; Aage og Johanne Louis-Hansens Fond; Novo Nordisk Fonden; Lundbeckfonden; Ural Branch, Russian Academy of Sciences; European Commission; University of Oxford; Research Councils UK; Wellcome Trust; Sight Research UK; Government of Canada; Queen Mary University of London; Science for Life Laboratory; Villum Fonden","keywords":"Biological dispersal; Geography; Ancient history; Biology; Demography; History; Sociology","score_opus":0.02946556590791378,"score_gpt":0.325298069383959,"score_spread":0.2958325034760452,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3200248150","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965373,0.000620974,0.0009917951,0.00009918855,0.000012493553,0.0000032712514,0.00040244067,0.000019114197,0.001313377],"genre_scores_gemma":[0.9977983,0.00038159188,0.00062493904,0.000069797105,0.0000066331186,0.0000048357215,0.0005906624,0.000008856029,0.0005143661],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998264,0.00003804446,0.000010550279,0.00007719592,0.000024636145,0.000023137205],"domain_scores_gemma":[0.99976987,0.000038202677,0.00007441556,0.000042839598,0.000040715666,0.000033921893],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005666231,0.00017333642,0.00025903078,0.0007257118,0.0008011925,0.00085494533,0.00018107402,0.0002573507,0.0017948399],"category_scores_gemma":[0.00075079745,0.00015550772,0.00025612264,0.0013261839,0.0007344717,0.0007682908,0.0006101345,0.00036319965,0.00031353452],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039814418,0.000038486167,0.89026195,0.00013813203,0.00042148406,0.0009135427,0.0050577,0.0014024677,0.04252604,0.0020181804,0.00077186903,0.056052044],"study_design_scores_gemma":[0.0000034862599,0.00002403719,0.99408466,0.000028312386,0.000032804255,0.00027675886,0.0006934254,0.00054147287,0.0006175269,0.00073086156,0.0029576926,0.000009024388],"about_ca_topic_score_codex":0.0052429186,"about_ca_topic_score_gemma":0.009936268,"teacher_disagreement_score":0.0052429186,"about_ca_system_score_codex":0.00047714403,"about_ca_system_score_gemma":0.000400584,"threshold_uncertainty_score":0.010424793},"labels":[],"label_agreement":null},{"id":"W3201118630","doi":"10.7202/1083166ar","title":"What Is an Animal? Contagion and Being Human in a Multispecies World","year":2021,"lang":"en","type":"article","venue":"Lumen Selected Proceedings from the Canadian Society for Eighteenth-Century Studies","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Creatures; Plague (disease); Felling; Enlightenment; Pandemic; History; Coronavirus disease 2019 (COVID-19); Environmental ethics; Ecology; Ancient history; Biology; Archaeology; Medicine; Philosophy","score_opus":0.02571720728628884,"score_gpt":0.29869746985927953,"score_spread":0.2729802625729907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3201118630","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16419029,0.16521068,0.0040849387,0.26136735,0.0035459264,0.00004778615,0.00010057706,0.00004343338,0.40140903],"genre_scores_gemma":[0.9080054,0.05181554,0.001007354,0.013372052,0.0011476494,0.00001915236,0.000024539591,0.000015859689,0.024592465],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99909997,0.0005494105,0.000017056074,0.000079641584,0.00012062447,0.0001333786],"domain_scores_gemma":[0.99929523,0.00033048127,0.00008773541,0.000056366076,0.000097566524,0.00013269146],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018329656,0.0002489048,0.00022175083,0.0007415557,0.0046444903,0.0052355826,0.00031655096,0.001668157,0.0026689463],"category_scores_gemma":[0.0015095263,0.00011385901,0.0000933679,0.0005839176,0.044452716,0.0049388264,0.0019012284,0.0016746736,0.00024959352],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055454962,0.000044478984,0.010057416,0.00021900341,0.000020840402,0.00095349824,0.27729097,0.00011227302,0.0018063717,0.6282446,0.024376683,0.056818467],"study_design_scores_gemma":[0.0000044149065,0.00007679365,0.008825086,0.000555922,0.000017260661,0.0008513153,0.15770566,0.00005651818,0.00041949766,0.093004026,0.7384576,0.00002595438],"about_ca_topic_score_codex":0.027715845,"about_ca_topic_score_gemma":0.043243833,"teacher_disagreement_score":0.027715845,"about_ca_system_score_codex":0.0028684787,"about_ca_system_score_gemma":0.002166767,"threshold_uncertainty_score":0.055109024},"labels":[],"label_agreement":null},{"id":"W3201777684","doi":"10.33137/rr.v44i2.37522","title":"Plague Time: Space, Fear, and Emergency Statecraft in Early Modern Italy","year":2021,"lang":"en","type":"article","venue":"Renaissance and Reformation","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Plague (disease); Authoritarianism; Existentialism; Dimension (graph theory); Michel foucault; History; Early modern Europe; Politics; Political economy; Sociology; Economic history; Ancient history; Political science; Law; Democracy","score_opus":0.008058374867366597,"score_gpt":0.25453500334758933,"score_spread":0.24647662848022273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3201777684","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.78679657,0.016103659,0.0017103626,0.024843493,0.00029564567,0.000017172786,0.000042642027,0.000032227177,0.17015824],"genre_scores_gemma":[0.9948201,0.0015037515,0.000087257344,0.00033133035,0.00012059198,0.0000060252364,0.00000920054,0.0000039748456,0.0031178265],"study_design_codex":"qualitative","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994542,0.00027435215,0.000014333696,0.0000500507,0.000050381528,0.00015671656],"domain_scores_gemma":[0.9995704,0.00015530386,0.0001484837,0.000027235277,0.00003098196,0.00006758588],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012414067,0.00022834487,0.00019673973,0.0012063093,0.0025174099,0.0038732928,0.0003946704,0.0011139638,0.0017709015],"category_scores_gemma":[0.001192757,0.00018794897,0.00021229424,0.0007578373,0.018508699,0.0025364044,0.0025109488,0.0014957243,0.0001600538],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018515985,0.000100360856,0.018734265,0.0001300464,0.000015052944,0.0012710483,0.5101032,0.00046182153,0.0009841037,0.43416992,0.0053533907,0.02849159],"study_design_scores_gemma":[0.000025429317,0.00028819492,0.15048581,0.0005553964,0.000029671082,0.0024768112,0.34117675,0.0007991377,0.0008405179,0.11170717,0.39148623,0.00012888838],"about_ca_topic_score_codex":0.009454983,"about_ca_topic_score_gemma":0.012599289,"teacher_disagreement_score":0.009454983,"about_ca_system_score_codex":0.0075610154,"about_ca_system_score_gemma":0.0011443911,"threshold_uncertainty_score":0.05485922},"labels":[],"label_agreement":null},{"id":"W3202236931","doi":"10.30917/att-vk-1814-9588-2021-5-15","title":"Role of wild animals in epizootology of infectious diseases inYakutia","year":2021,"lang":"en","type":"article","venue":"Veterinaria i kormlenie","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Leptospirosis; Leptospira; Population; Biology; Yersinia enterocolitica; Veterinary medicine; Virology; Environmental health; Medicine; Bacteria","score_opus":0.010041672927479999,"score_gpt":0.27946001657837977,"score_spread":0.2694183436508998,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202236931","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959927,0.0014008511,0.0002329965,0.00009839495,0.000023831439,0.000013353698,0.00013250014,0.0000137685665,0.0020916308],"genre_scores_gemma":[0.99753726,0.0010158328,0.00023805117,0.000036772868,0.00003100602,0.0000058514775,0.00022415876,0.00000328809,0.00090770243],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999729,0.00004488233,0.000025157819,0.000051345934,0.000042622032,0.00010700983],"domain_scores_gemma":[0.9997011,0.000041064595,0.00011707109,0.000023432332,0.000054370732,0.000062989755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023813947,0.0003093887,0.00022920886,0.0013351364,0.0009875181,0.0010957469,0.00033579546,0.00030111976,0.0020982248],"category_scores_gemma":[0.00030133975,0.00021854817,0.00023261142,0.00089864805,0.00070500735,0.00032893752,0.0005089988,0.0002977554,0.00019619722],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014738299,0.00009785629,0.9581473,0.00013178933,0.000026554284,0.0034358723,0.0018776604,0.00008412763,0.014012296,0.00024572463,0.00029886139,0.021494506],"study_design_scores_gemma":[0.0000029588723,0.00008064566,0.99430674,0.000030378009,0.000020562124,0.0016588292,0.0013434582,0.000117994874,0.00093473645,0.00006345587,0.0014325273,0.000007763843],"about_ca_topic_score_codex":0.019462937,"about_ca_topic_score_gemma":0.023570988,"teacher_disagreement_score":0.019462937,"about_ca_system_score_codex":0.0007244601,"about_ca_system_score_gemma":0.00081507035,"threshold_uncertainty_score":0.03869933},"labels":[],"label_agreement":null},{"id":"W3210189555","doi":"","title":"A Plague of Racism: An Analysis of the Racialization of the Plague Throughout History","year":2021,"lang":"en","type":"article","venue":"Student Research Proceedings","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"MacEwan University","funders":"","keywords":"Racialization; Plague (disease); Racism; Pandemic; History; Criminology; Ethnology; Race (biology); Gender studies; Geography; Political science; Sociology; Development economics; Disease; Medicine; Ancient history; Infectious disease (medical specialty)","score_opus":0.07886209795928674,"score_gpt":0.4224992472600657,"score_spread":0.343637149300779,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3210189555","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88550204,0.00524547,0.0005863967,0.011926389,0.00017862162,0.000040465096,0.000072899435,0.000005002401,0.096442685],"genre_scores_gemma":[0.9920034,0.0028524906,0.00025981548,0.00073149666,0.00013604773,0.000017965349,0.000058243713,0.000013342695,0.0039271624],"study_design_codex":"qualitative","study_design_gemma":"qualitative","domain_scores_codex":[0.998665,0.0006971668,0.000021269088,0.00007323171,0.00022686832,0.00031642301],"domain_scores_gemma":[0.9969626,0.0011217154,0.0006139165,0.00009001876,0.0007491701,0.0004624381],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002166896,0.00022136004,0.0002343739,0.0034723997,0.008395155,0.0036242018,0.0005890811,0.00076909317,0.003390426],"category_scores_gemma":[0.003639886,0.00014726583,0.0002587595,0.0040029576,0.0073799132,0.003454134,0.0025985555,0.0015886055,0.00018973189],"study_design_candidate":"qualitative","study_design_consensus":"qualitative","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000083832805,0.000081094455,0.06392046,0.00010929575,0.000021411694,0.00061630516,0.816111,0.00005779211,0.00047276972,0.08169027,0.005554952,0.03128079],"study_design_scores_gemma":[0.0000060771667,0.000097828466,0.28502542,0.00041579577,0.000031383173,0.00069520023,0.63343185,0.00033769736,0.00016997923,0.0063884906,0.07337379,0.000026599015],"about_ca_topic_score_codex":0.046941124,"about_ca_topic_score_gemma":0.07298667,"teacher_disagreement_score":0.046941124,"about_ca_system_score_codex":0.005248233,"about_ca_system_score_gemma":0.0027982567,"threshold_uncertainty_score":0.09333581},"labels":[],"label_agreement":null},{"id":"W3211766835","doi":"10.1086/716131","title":"<i>Ancient Bones: Unearthing the Astonishing New Story of How We Became Human</i>. By Madelaine Böhme, Rüdiger Braun, and Florian Breier; Foreword by David R. Begun; translated by Jane Billinghurst. Vancouver (Canada) and Berkeley (California): Greystone Books. $28.95. xii + 337 p. + 8 pl.; ill.; index. ISBN: 978-1-77164-751-9 (hc); 978-1-77164-752-6 (eb). [First published in German in 2019.] 2020.","year":2021,"lang":"en","type":"review","venue":"The Quarterly Review of Biology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"German; Art history; History; Environmental ethics; Art; Classics; Philosophy; Archaeology","score_opus":0.009914496928607384,"score_gpt":0.26858365543029233,"score_spread":0.2586691585016849,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3211766835","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000052219315,0.98596954,0.000097212105,0.004734409,0.0035091005,0.0000026272837,0.0000250649,0.000016706808,0.005593178],"genre_scores_gemma":[0.0017507783,0.9307422,0.0003856599,0.005559387,0.0031840925,0.0000139468975,0.00010230413,0.00003916136,0.058222376],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.999645,0.00008235002,0.000022515518,0.000060294544,0.00014543803,0.00004441654],"domain_scores_gemma":[0.99968195,0.00013695731,0.00004094563,0.0000128338115,0.00007314162,0.00005412468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00060769037,0.0014364811,0.00094146485,0.001565317,0.0010831826,0.0030278247,0.0009642728,0.0019618631,0.023481917],"category_scores_gemma":[0.0013028645,0.000541189,0.0004587358,0.0018308801,0.0023633894,0.0050806203,0.0019603793,0.0037671707,0.017767046],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000063089064,0.000013120885,0.000080711456,0.0034966317,0.00002625405,0.00014766306,0.00077090773,0.000049216913,0.0005925706,0.011021948,0.7278821,0.2558559],"study_design_scores_gemma":[0.0000016177468,0.0000071778622,0.00011960389,0.00075701793,0.000004213081,0.00020051766,0.0001922533,0.000005931868,0.00006616743,0.0019598068,0.9966813,0.000004384644],"about_ca_topic_score_codex":0.0054041212,"about_ca_topic_score_gemma":0.011020715,"teacher_disagreement_score":0.9945959,"about_ca_system_score_codex":0.0014586854,"about_ca_system_score_gemma":0.0018864208,"threshold_uncertainty_score":0.07855481},"labels":[],"label_agreement":null},{"id":"W3279642","doi":"10.1093/obo/9780195399301-0016","title":"Black Death and Plague: The Disease and Medical Thought","year":2010,"lang":"en","type":"reference-entry","venue":"Renaissance and Reformation","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Plague (disease); Scholarship; Enthusiasm; History; Yersinia pestis; Outbreak; Subject (documents); Classics; Genealogy; Medicine; Ancient history; Political science; Virology; Biology; Law","score_opus":0.014390591017218532,"score_gpt":0.28367606435151355,"score_spread":0.26928547333429503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3279642","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008054185,0.5718696,0.00072787894,0.295041,0.009439618,0.000015178026,0.00004534814,0.000025540243,0.11478163],"genre_scores_gemma":[0.37233534,0.44214275,0.00222986,0.07686866,0.049608544,0.000058835834,0.000087566295,0.000056292203,0.056612257],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983816,0.0010283827,0.00006993562,0.0001323694,0.00023763342,0.00014996632],"domain_scores_gemma":[0.9980368,0.0012208957,0.00016321464,0.00007774141,0.00021498237,0.00028636758],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026489182,0.0003783978,0.0004509099,0.0028426002,0.0033863604,0.0047169924,0.00056796195,0.0036240695,0.0065072193],"category_scores_gemma":[0.0034799548,0.0001460538,0.00019519633,0.0014836094,0.021370662,0.0053370404,0.0023776747,0.0037208723,0.0010834608],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008950116,0.00007844865,0.0009261352,0.0004894949,0.000009424577,0.00028580698,0.027332652,0.00013973452,0.0002215589,0.73644555,0.15482876,0.07915287],"study_design_scores_gemma":[0.000016330978,0.000052721913,0.001268759,0.0009323392,0.000004276171,0.00040907148,0.010049358,0.00010639207,0.000060686663,0.21132658,0.77575487,0.000018569312],"about_ca_topic_score_codex":0.005839244,"about_ca_topic_score_gemma":0.004594284,"teacher_disagreement_score":0.0065072193,"about_ca_system_score_codex":0.0045244717,"about_ca_system_score_gemma":0.0034258803,"threshold_uncertainty_score":0.032827497},"labels":[],"label_agreement":null},{"id":"W339748778","doi":"10.31274/safepork-180809-851","title":"Monitoring of Salmonella, Campylobacter, Yersinia enterocolitica, E. coli 0157, and Listeria monocytogenes on a subset of Canadian swine farms","year":2009,"lang":"en","type":"article","venue":"International Conference on the Epidemiology and Control of Biological, Chemical and Physical Hazards in Pigs and Pork","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; University of Guelph","funders":"","keywords":"Yersinia enterocolitica; Listeria monocytogenes; Salmonella; Campylobacter; Microbiology; Yersinia; Listeria; Biology; Bacteria; Genetics","score_opus":0.07358854511777176,"score_gpt":0.3386642796629413,"score_spread":0.2650757345451696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W339748778","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992925,0.000058056303,0.000057754238,0.00001271249,0.0000013474187,0.0000075469648,0.0002824859,0.0000031080087,0.0002844358],"genre_scores_gemma":[0.9980883,0.00015526092,0.00023851318,0.0000261012,0.00000237598,0.000007821164,0.0008427395,0.0000014498336,0.0006373667],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995913,0.000024047817,0.000017130367,0.00007086649,0.0001933597,0.000103221784],"domain_scores_gemma":[0.99927384,0.000038964357,0.00018927161,0.000019240966,0.00034432046,0.00013447134],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030252745,0.00035423538,0.00022433678,0.0007575156,0.00089286483,0.0005426102,0.0002813098,0.00019832731,0.00042787957],"category_scores_gemma":[0.0004558822,0.00021584319,0.0002418516,0.0007497611,0.00036941207,0.00017513066,0.00024958327,0.00017742426,0.000084194435],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009696924,0.00001655877,0.9831509,0.000018839102,0.00002687687,0.0001456132,0.00029170464,0.00008452751,0.0128465835,0.000009436666,0.000104596176,0.0032073562],"study_design_scores_gemma":[0.000001159628,0.00005238805,0.9985902,0.0000031073473,0.000008055296,0.000060091275,0.0002656218,0.00009041198,0.0007000993,0.0000016998108,0.00022536582,0.0000017931558],"about_ca_topic_score_codex":0.7325204,"about_ca_topic_score_gemma":0.90026265,"teacher_disagreement_score":0.2674796,"about_ca_system_score_codex":0.0037891564,"about_ca_system_score_gemma":0.0037604426,"threshold_uncertainty_score":0.53810966},"labels":[],"label_agreement":null},{"id":"W36658311","doi":"10.1038/s42003-022-04394-6","title":"東レエンジニアリング(株)の膜形状測定装置SP-500F--光干渉法による表面形状と膜厚分布の同時計測 (特集:最近の非接触三次元計測)","year":2004,"lang":"en","type":"article","venue":"光アライアンス","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Government of Canada","keywords":"Computer science","score_opus":0.008914488040538158,"score_gpt":0.2765911523322326,"score_spread":0.2676766642916944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W36658311","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8230334,0.0035330432,0.14077577,0.00060408725,0.00018882606,0.00022470123,0.007569978,0.0011419054,0.022928271],"genre_scores_gemma":[0.90424347,0.0009728399,0.07659156,0.0002323411,0.000039121467,0.00011294982,0.010927576,0.00025371282,0.006626411],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999385,0.00008961956,0.000033699158,0.0002729834,0.00014292731,0.00007573985],"domain_scores_gemma":[0.9995541,0.000081538274,0.00012754434,0.00006163866,0.00010291491,0.0000722057],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001284442,0.000448688,0.000705531,0.0007382776,0.00074197986,0.0008583828,0.00051997404,0.00080174353,0.006244812],"category_scores_gemma":[0.000982879,0.0004295607,0.0006299747,0.0012060088,0.0007121694,0.0008210462,0.00052664924,0.00093303417,0.0052692858],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012402474,0.0002494615,0.100190245,0.00049130904,0.00035999823,0.00071468577,0.00072854856,0.009337791,0.67167985,0.005780192,0.0049236533,0.20430413],"study_design_scores_gemma":[0.0001770473,0.001520506,0.29172885,0.00019598789,0.0005005184,0.0034626743,0.0010656404,0.099625826,0.48371685,0.00804975,0.10972821,0.00022814421],"about_ca_topic_score_codex":0.006179387,"about_ca_topic_score_gemma":0.008514905,"teacher_disagreement_score":0.006244812,"about_ca_system_score_codex":0.0007351057,"about_ca_system_score_gemma":0.0005986422,"threshold_uncertainty_score":0.020890951},"labels":[],"label_agreement":null},{"id":"W38876199","doi":"","title":"Hygiene at winter bird feeders in a southwestern Ontario city.","year":2000,"lang":"en","type":"article","venue":"PubMed","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Feces; Hygiene; Salmonella; Contamination; Veterinary medicine; Biology; Fecal coliform; Geography; Environmental health; Ecology; Medicine","score_opus":0.018330428533045545,"score_gpt":0.23294738729931178,"score_spread":0.21461695876626624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W38876199","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9994661,0.000042080428,0.000024613628,0.000020934605,0.00000130517,0.00000645424,0.0001372504,0.00000209748,0.00029901095],"genre_scores_gemma":[0.99857783,0.00008473299,0.000095677584,0.000022238437,0.000001876532,0.0000053615645,0.0002159663,0.0000011606892,0.0009951296],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998485,0.000009977655,0.0000056222934,0.000026078123,0.000044579218,0.00006525114],"domain_scores_gemma":[0.9995865,0.000014454037,0.00014032138,0.000010875908,0.000121419165,0.00012641113],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000106960775,0.0002659157,0.0001645872,0.00045646515,0.0015562604,0.00040482098,0.000260528,0.00019981008,0.0014320032],"category_scores_gemma":[0.0003486357,0.0002852978,0.00015533272,0.00058753905,0.0004740603,0.00018001994,0.00035223961,0.00019066094,0.00017842554],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007512018,0.000021989646,0.99192905,0.000015978156,0.000010635173,0.00034221236,0.0021591452,0.00003539912,0.0028411718,0.000011047876,0.0002052721,0.0023528382],"study_design_scores_gemma":[0.0000013363958,0.000039469145,0.99844533,0.0000028574968,0.0000035160654,0.000054760494,0.0011212089,0.00003483027,0.000081677994,0.0000026435268,0.00021081924,0.0000016537718],"about_ca_topic_score_codex":0.87823313,"about_ca_topic_score_gemma":0.95964265,"teacher_disagreement_score":0.121766865,"about_ca_system_score_codex":0.00443567,"about_ca_system_score_gemma":0.0027599076,"threshold_uncertainty_score":0.24496788},"labels":[],"label_agreement":null},{"id":"W406618024","doi":"10.1155/2008/159219","title":"Regard sur les Lazarets en Terre Canadienne","year":2007,"lang":"fr","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Montréal","funders":"","keywords":"Geology","score_opus":0.00548732340919146,"score_gpt":0.23434854355632065,"score_spread":0.2288612201471292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W406618024","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2413981,0.45695958,0.00059306895,0.09611434,0.0053162742,0.000055132976,0.00038430613,0.000042171017,0.199137],"genre_scores_gemma":[0.6905133,0.22354367,0.00052179216,0.008630312,0.0032285957,0.000037555044,0.00016937617,0.00001837091,0.073336944],"study_design_codex":"qualitative","study_design_gemma":"observational","domain_scores_codex":[0.9990752,0.00021576254,0.00004626031,0.0001105487,0.00023289611,0.00031938916],"domain_scores_gemma":[0.99872833,0.0004300327,0.00024292749,0.000048452745,0.0002871597,0.0002630791],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010387131,0.00036683792,0.00040740453,0.0030398679,0.006218451,0.00407328,0.0006501494,0.002762581,0.008682148],"category_scores_gemma":[0.0022782919,0.00016653349,0.00029169166,0.003768438,0.008889851,0.0017635605,0.00221417,0.0019803133,0.0009921466],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043351637,0.0001430542,0.11701198,0.0044205096,0.00009002063,0.025213331,0.3558374,0.00043513597,0.008978241,0.2182644,0.06426832,0.2049041],"study_design_scores_gemma":[0.000008730211,0.00013678911,0.04268071,0.0017210122,0.00003516809,0.0067833895,0.08716705,0.000016825852,0.0004897597,0.0046042157,0.85630333,0.000052948355],"about_ca_topic_score_codex":0.14134988,"about_ca_topic_score_gemma":0.34122804,"teacher_disagreement_score":0.8586501,"about_ca_system_score_codex":0.0052301316,"about_ca_system_score_gemma":0.007735772,"threshold_uncertainty_score":0.28105426},"labels":[],"label_agreement":null},{"id":"W409880874","doi":"10.22621/cfn.v124i3.1075","title":"Observations of Bobcats, &lt;em&gt;Lynx rufus&lt;/em&gt;, Hunting Black-Tailed Prairie Dogs, &lt;em&gt;Cynomys ludovicianus&lt;/em&gt;, in Western South Dakota","year":2010,"lang":"en","type":"article","venue":"The Canadian Field-Naturalist","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Cynomys ludovicianus; Prairie dog; Burrow; Geography; Badger; Ecology; Archaeology; Forestry; Biology","score_opus":0.018628962074581482,"score_gpt":0.2574330398043878,"score_spread":0.23880407772980633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W409880874","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986284,0.00015835401,0.000059166705,0.000029536008,0.0000025602599,0.000009876336,0.00016582038,0.000003957361,0.0009422709],"genre_scores_gemma":[0.99687505,0.00035278703,0.0003905775,0.00009267629,0.000005468107,0.000028166132,0.000531403,0.0000028771158,0.0017210348],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998493,0.000028603625,0.000014434252,0.000043479184,0.00003633068,0.000027796043],"domain_scores_gemma":[0.9995235,0.00006151698,0.00021573568,0.00002870195,0.00008416751,0.00008638364],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032876414,0.00015279879,0.000136976,0.0007550321,0.0010545719,0.00025953533,0.0002892455,0.00029029726,0.0012157254],"category_scores_gemma":[0.00033509446,0.00020883948,0.00009610342,0.0005465663,0.0006123007,0.0002696295,0.0005081512,0.00021736693,0.00035384926],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006525787,0.00005645191,0.9759079,0.000059696224,0.000030349725,0.0008383577,0.005592293,0.000055789224,0.009281421,0.00003748513,0.0008593662,0.0072155464],"study_design_scores_gemma":[0.0000016838811,0.00003764625,0.9965077,0.000009923181,0.000005722294,0.0002015517,0.0019405786,0.000039889295,0.00021529038,0.000005948237,0.0010312741,0.0000026822643],"about_ca_topic_score_codex":0.08459179,"about_ca_topic_score_gemma":0.46441093,"teacher_disagreement_score":0.08459179,"about_ca_system_score_codex":0.0005969762,"about_ca_system_score_gemma":0.0006114892,"threshold_uncertainty_score":0.16819882},"labels":[],"label_agreement":null},{"id":"W4200004792","doi":"10.29173/connections42","title":"The Mobile Woman: Getting Around during the 1630 Plague in Bologna","year":2021,"lang":"en","type":"article","venue":"Connections A Journal of Language Media and Culture","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Plague (disease); Scholarship; Public space; Gender studies; Political science; Medicine; Economic growth; History; Sociology; Law; Ancient history; Engineering; Economics","score_opus":0.005739403732382564,"score_gpt":0.26224383536234014,"score_spread":0.25650443162995756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200004792","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.82355213,0.025022771,0.00063008425,0.05227304,0.002200171,0.00012479007,0.00025746494,0.00007092464,0.09586861],"genre_scores_gemma":[0.92577016,0.011080149,0.00042259376,0.0077993153,0.00068225065,0.00008013644,0.00007872884,0.0000770187,0.054009628],"study_design_codex":"qualitative","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990055,0.00047230124,0.000021512853,0.00008940042,0.0000977512,0.0003134889],"domain_scores_gemma":[0.99956435,0.0001579518,0.000090747184,0.000015560707,0.000023802986,0.00014747938],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001254309,0.0006095785,0.000503497,0.0011670336,0.014150982,0.0052466854,0.00085797056,0.00267718,0.008472503],"category_scores_gemma":[0.0019726437,0.00058563397,0.00023678488,0.0011101707,0.010017782,0.0042675454,0.0054231384,0.0033252616,0.0013471146],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059575057,0.00004601304,0.003263929,0.00019009809,0.000006463553,0.0035473632,0.96633697,0.000023971263,0.00084625,0.0048156846,0.0094309235,0.011432795],"study_design_scores_gemma":[0.0000084182275,0.0000918046,0.017193263,0.0006198575,0.000009926799,0.0022236344,0.7291407,0.000028855,0.00020660489,0.00030580236,0.250136,0.000035123412],"about_ca_topic_score_codex":0.04022078,"about_ca_topic_score_gemma":0.092467554,"teacher_disagreement_score":0.04022078,"about_ca_system_score_codex":0.007069621,"about_ca_system_score_gemma":0.0015191574,"threshold_uncertainty_score":0.07997334},"labels":[],"label_agreement":null},{"id":"W4200106877","doi":"10.2993/0278-0771-41.4.481","title":"Ethnohistoric Accounts as Valuable Resources for Deciphering Commensal Relationships of Pre-Contact Caribbean Agouti (Dasyproctidae: <i>Dasyprocta</i> )","year":2021,"lang":"en","type":"article","venue":"Journal of Ethnobiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Indigenous; Captivity; Human settlement; Ethnology; Geography; Ecology; Anthropology; History; Sociology; Archaeology; Biology","score_opus":0.03170757490307027,"score_gpt":0.32771171757738665,"score_spread":0.2960041426743164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200106877","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8899967,0.007962284,0.0028561593,0.002007526,0.000097269854,0.000074142336,0.0005420478,0.000046540183,0.09641723],"genre_scores_gemma":[0.9875815,0.0033734653,0.0019216744,0.00026267476,0.00008745831,0.00003687233,0.00025890736,0.0000321001,0.006445338],"study_design_codex":"qualitative","study_design_gemma":"observational","domain_scores_codex":[0.9992588,0.00051621144,0.000031623502,0.00006544397,0.00006335908,0.000064552],"domain_scores_gemma":[0.9972549,0.0019149929,0.00038976947,0.00020741406,0.00013807548,0.00009480507],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014215696,0.000454257,0.00020914078,0.0043003145,0.004085882,0.0022423163,0.000373999,0.0005792652,0.005702581],"category_scores_gemma":[0.002209979,0.00015317778,0.00007618823,0.002384685,0.008154216,0.0022965402,0.0018375794,0.0006686045,0.00027385898],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054440818,0.000022520622,0.004841229,0.0004926519,0.000011705148,0.0013236401,0.94253355,0.000050297695,0.0034952215,0.016452976,0.0015322627,0.02918961],"study_design_scores_gemma":[0.0000077096565,0.000047370817,0.04451501,0.0012531492,0.0000412312,0.0024333,0.726184,0.00014227716,0.0018658787,0.0033928384,0.22008516,0.00003215416],"about_ca_topic_score_codex":0.009121895,"about_ca_topic_score_gemma":0.03978995,"teacher_disagreement_score":0.009121895,"about_ca_system_score_codex":0.0023397673,"about_ca_system_score_gemma":0.00072983187,"threshold_uncertainty_score":0.019077063},"labels":[],"label_agreement":null},{"id":"W4200525607","doi":"10.21203/rs.3.rs-1146895/v1","title":"Plagued by a cryptic clock: Insight and issues from the global phylogeny of Yersinia pestis","year":2021,"lang":"en","type":"preprint","venue":"Research Square","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institute for Advanced Research; McMaster University","funders":"Compute Canada; McMaster University; Social Sciences and Humanities Research Council of Canada; Canadian Institute for Advanced Research","keywords":"Yersinia pestis; Phylogenetics; Evolutionary biology; Biology; Computational biology; Genetics; Gene","score_opus":0.029151395150323372,"score_gpt":0.3726665495343473,"score_spread":0.3435151543840239,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200525607","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8591783,0.04992404,0.048845373,0.02050588,0.0005791165,0.00001560455,0.0011080452,0.00034958884,0.019494127],"genre_scores_gemma":[0.9773563,0.0146578755,0.004869375,0.00062321336,0.0003259759,0.000008096198,0.0006098406,0.00012888286,0.0014203818],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99967635,0.000099345576,0.000018486366,0.00011130326,0.000043410808,0.000051211926],"domain_scores_gemma":[0.9988568,0.0005167205,0.0002216003,0.0001686002,0.0001461138,0.00009018824],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014415907,0.0004611454,0.00081503816,0.0006557748,0.0006407217,0.0026781121,0.00037478743,0.00074380497,0.0019032719],"category_scores_gemma":[0.0029238346,0.00022843151,0.00019838443,0.0017406862,0.0017541643,0.004243535,0.00089202385,0.0013868007,0.00036610357],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018078864,0.00010886554,0.16920814,0.0024007775,0.00054448994,0.0020323705,0.009214951,0.025607528,0.117932096,0.25234574,0.015691683,0.40310544],"study_design_scores_gemma":[0.00010308903,0.00025994875,0.5148653,0.00079412496,0.00036016485,0.0019372146,0.010525962,0.028974194,0.011165952,0.2529429,0.17789231,0.00017888656],"about_ca_topic_score_codex":0.0022271294,"about_ca_topic_score_gemma":0.0014795603,"teacher_disagreement_score":0.0026781121,"about_ca_system_score_codex":0.0008879153,"about_ca_system_score_gemma":0.0005551756,"threshold_uncertainty_score":0.0076239705},"labels":[],"label_agreement":null},{"id":"W4205600029","doi":"10.1016/j.chest.2020.06.004","title":"Human Amnesia","year":2020,"lang":"en","type":"editorial","venue":"CHEST Journal","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"University of Toronto","keywords":"Plague (disease); Humanity; Pandemic; Grief; Criminology; Medicine; Population; History; Infectious disease (medical specialty); Psychoanalysis; Environmental ethics; Ancient history; Disease; Demography; Law; Coronavirus disease 2019 (COVID-19); Psychology; Psychiatry; Sociology; Political science; Philosophy","score_opus":0.014402477080223202,"score_gpt":0.3142477041300779,"score_spread":0.2998452270498547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205600029","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013936887,0.02930918,0.00007714963,0.051819727,0.9134388,0.000025219631,0.00005807852,0.000044863944,0.005087595],"genre_scores_gemma":[0.001895304,0.015811615,0.000097527416,0.042041346,0.92423284,0.000039123952,0.00006602749,0.000021150076,0.015795156],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99863607,0.00034705194,0.00020444825,0.00018497118,0.00047997237,0.00014749539],"domain_scores_gemma":[0.99468106,0.0023701005,0.0003946052,0.00025248757,0.0014166255,0.0008851162],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029019297,0.0020444053,0.0016963312,0.0025628547,0.0013570285,0.0029669108,0.0014861433,0.010906308,0.010462929],"category_scores_gemma":[0.009657179,0.0007784475,0.0013666385,0.0006828022,0.0016619103,0.0014260598,0.0011828475,0.011244138,0.005614744],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008632124,0.000011863812,0.000057075646,0.0003339314,0.000030451058,0.0006527329,0.000009866768,0.000013623777,0.00010575694,0.00030513923,0.98776776,0.010625373],"study_design_scores_gemma":[0.00011717977,0.000050382434,0.00075116806,0.0005273341,0.000097818505,0.0011349408,0.00002391419,0.000051597883,0.00011938796,0.0005159597,0.996594,0.000016282078],"about_ca_topic_score_codex":0.0023913123,"about_ca_topic_score_gemma":0.0056920107,"teacher_disagreement_score":0.010906308,"about_ca_system_score_codex":0.0027270918,"about_ca_system_score_gemma":0.0019945255,"threshold_uncertainty_score":0.035001993},"labels":[],"label_agreement":null},{"id":"W4205771810","doi":"10.1644/0.720.1","title":"Amblonyx cinereus","year":2003,"lang":"en","type":"article","venue":"Mammalian Species","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Environmental science; Ecology; Biology","score_opus":0.017484534388366255,"score_gpt":0.26001241430736677,"score_spread":0.24252787991900052,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205771810","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9634332,0.0025726878,0.0017509422,0.00021745695,0.0001363388,0.00006917292,0.0019598338,0.00029011178,0.02957019],"genre_scores_gemma":[0.9557525,0.00089902646,0.001633897,0.0003031821,0.000032436466,0.000029303097,0.0020478342,0.000035749632,0.039266072],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999318,0.0000052417004,0.000003829096,0.000026112824,0.000009945026,0.00002315987],"domain_scores_gemma":[0.9998852,0.000022397193,0.000026160536,0.000016481976,0.000015192873,0.000034667195],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006119163,0.00023350315,0.00013784035,0.0003840059,0.00022532523,0.00024381286,0.00022247747,0.000326033,0.0068058777],"category_scores_gemma":[0.00010613719,0.000091171314,0.000111885005,0.00009561429,0.00010475744,0.00030069318,0.00023478387,0.0004754891,0.0018906009],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039910845,0.000063696956,0.0012340456,0.00005367537,0.0000039950105,0.00025129743,0.000035978177,0.000038178812,0.9910977,0.00023413647,0.00026962283,0.0063185208],"study_design_scores_gemma":[0.000117752345,0.0025730678,0.19878902,0.00009385323,0.00008182412,0.00574787,0.0005999912,0.0017498321,0.7265945,0.00063352176,0.06298322,0.000035504305],"about_ca_topic_score_codex":0.0018648384,"about_ca_topic_score_gemma":0.001523346,"teacher_disagreement_score":0.0068058777,"about_ca_system_score_codex":0.00025889202,"about_ca_system_score_gemma":0.000078597375,"threshold_uncertainty_score":0.022767901},"labels":[],"label_agreement":null},{"id":"W4205776310","doi":"10.1111/geb.13453","title":"Biotic factors limit the invasion of the plague pathogen (<i>Yersinia pestis</i>) in novel geographical settings","year":2022,"lang":"en","type":"article","venue":"Global Ecology and Biogeography","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakehead University","funders":"Natural Environment Research Council; Sight Research UK","keywords":"Niche; Ecology; Ecological niche; Yersinia pestis; Biology; Range (aeronautics); Environmental niche modelling; Host (biology); Macroecology; Plague (disease); Geography; Biogeography; Habitat","score_opus":0.007546275778371007,"score_gpt":0.22324432688978343,"score_spread":0.21569805111141244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205776310","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966023,0.0001075752,0.0022942843,0.000079368496,0.0000052041178,0.000007988628,0.00010681258,0.000029752146,0.0007666509],"genre_scores_gemma":[0.99911934,0.000060952385,0.0005892366,0.000016589027,0.0000038005608,0.000008384667,0.00008940514,0.00001011928,0.000102222155],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99959916,0.00017753725,0.000024852696,0.00011948286,0.00002181827,0.000057108864],"domain_scores_gemma":[0.99849474,0.0006730213,0.00048648773,0.00008986583,0.00012715849,0.00012879354],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010099034,0.0006063149,0.00040576464,0.0004237599,0.00043437473,0.0014604345,0.0007310128,0.00051283365,0.0017960432],"category_scores_gemma":[0.0027354404,0.00034777357,0.0009746077,0.00028997223,0.00074795564,0.0013597478,0.0009038131,0.00049051363,0.00021940251],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006072303,0.0003113149,0.6406733,0.00032455457,0.0011262661,0.00062754215,0.000693756,0.3145453,0.024134804,0.006404114,0.00078073266,0.009771075],"study_design_scores_gemma":[0.00011638809,0.0006302525,0.3352323,0.00007625627,0.00049404573,0.00043889947,0.0016216832,0.6504327,0.0028704111,0.005836891,0.0021635243,0.00008666122],"about_ca_topic_score_codex":0.010781771,"about_ca_topic_score_gemma":0.010351564,"teacher_disagreement_score":0.010781771,"about_ca_system_score_codex":0.0008117275,"about_ca_system_score_gemma":0.0005869578,"threshold_uncertainty_score":0.021438003},"labels":[],"label_agreement":null},{"id":"W4207034116","doi":"10.22621/cfn.v135i3.2625","title":"First evidence of White-footed Deer Mouse (&lt;i&gt;Peromyscus leucopus&lt;/i&gt;) on mainland New Brunswick, Canada","year":2022,"lang":"en","type":"article","venue":"The Canadian Field-Naturalist","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"University of New Brunswick","funders":"Fonds en Fiducie pour la Faune du Nouveau-Brunswick; Canada Research Chairs","keywords":"Peromyscus; Biology; Zoology; Deer mouse; Range (aeronautics); Cytochrome b; Mainland; Ecology; Geography; Phylogenetic tree; Gene","score_opus":0.015248626852341228,"score_gpt":0.2410230694213338,"score_spread":0.22577444256899257,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4207034116","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9866997,0.0012825439,0.00022578173,0.0003608586,0.00003811103,0.000074239935,0.0018114257,0.000028320252,0.009479003],"genre_scores_gemma":[0.99543613,0.00072523765,0.00061209727,0.0002880027,0.0000095941405,0.000018714034,0.00094846624,0.0000071834993,0.001954524],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99965525,0.000017846023,0.00001895575,0.000054525986,0.00010629101,0.00014712162],"domain_scores_gemma":[0.99870515,0.00006797592,0.00025363165,0.000041229003,0.0006114805,0.0003206235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021977644,0.0003792242,0.00027198653,0.0018517298,0.0026390762,0.0007649977,0.0009076655,0.00043608947,0.0019520695],"category_scores_gemma":[0.00054986216,0.0003238475,0.000241153,0.0020111075,0.0008643006,0.00028603015,0.00085170433,0.0005756338,0.0003107281],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017086363,0.000045592213,0.9676398,0.00012523834,0.00005759511,0.0024092381,0.0028095916,0.0001323621,0.010705959,0.00019556348,0.0027893428,0.012918847],"study_design_scores_gemma":[0.000008696299,0.000034849487,0.9910527,0.000083614956,0.000021923377,0.0006517966,0.0026285546,0.00011739983,0.00049035094,0.00002002912,0.0048762592,0.000013799922],"about_ca_topic_score_codex":0.97473484,"about_ca_topic_score_gemma":0.9966641,"teacher_disagreement_score":0.025265157,"about_ca_system_score_codex":0.008729365,"about_ca_system_score_gemma":0.009422656,"threshold_uncertainty_score":0.06333631},"labels":[],"label_agreement":null},{"id":"W4210414401","doi":"10.3390/genes13020267","title":"Genomic Analysis Reveals Subdivision of Black Rats (Rattus rattus) in India, Origin of the Worldwide Species Spread","year":2022,"lang":"en","type":"article","venue":"Genes","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; Phylogeography; Genotyping; Population; Zoology; Evolutionary biology; Phylogenetics; Genotype; Genetics; Gene","score_opus":0.016181321584559146,"score_gpt":0.27669108790403235,"score_spread":0.2605097663194732,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210414401","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99946374,0.000051550967,0.000118835334,0.00000916281,0.0000010096422,0.000001859689,0.000070077826,0.000005648765,0.00027809036],"genre_scores_gemma":[0.9992818,0.00006746315,0.0002381984,0.0000138490295,0.0000017639908,0.0000040784935,0.00022025169,0.0000034160746,0.0001690725],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999846,0.000019458219,0.0000093791605,0.000060545415,0.000021386923,0.00004324024],"domain_scores_gemma":[0.9997969,0.000033459943,0.000092024464,0.000021427764,0.000025254916,0.000030871695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009090351,0.00015741643,0.00015841174,0.0012901095,0.00020973006,0.00034831042,0.00014389565,0.00014487095,0.0004722819],"category_scores_gemma":[0.00022789332,0.00012910322,0.00023011869,0.0007067763,0.00034279504,0.00008137144,0.00028911236,0.00019021027,0.00013439349],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064668996,0.000070051574,0.6262489,0.000063567895,0.00011209582,0.00051171903,0.0020766088,0.00032092398,0.3520305,0.0003119447,0.00010561293,0.017501315],"study_design_scores_gemma":[0.0000020679802,0.00006339813,0.99760497,0.0000032733633,0.000021846461,0.00023443636,0.00032525367,0.00009742472,0.0014166469,0.000028669652,0.00019852573,0.00000352768],"about_ca_topic_score_codex":0.006159956,"about_ca_topic_score_gemma":0.008300185,"teacher_disagreement_score":0.006159956,"about_ca_system_score_codex":0.00012462746,"about_ca_system_score_gemma":0.00017681946,"threshold_uncertainty_score":0.012248218},"labels":[],"label_agreement":null},{"id":"W4225419614","doi":"10.1038/s41467-022-30009-z","title":"Palaeogenomic analysis of black rat (Rattus rattus) reveals multiple European introductions associated with human economic history","year":2022,"lang":"en","type":"article","venue":"Nature Communications","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University; University of British Columbia","funders":"Arts and Humanities Research Council; Max-Planck-Institut für Menschheitsgeschichte; Henan Institute of Science and Technology; Natural Environment Research Council; Akademie Věd České Republiky; Max-Planck-Gesellschaft; University of Oxford; Eesti Teadusagentuur; Max-Planck-Institut für Evolutionäre Anthropologie; Leverhulme Trust; British Academy; Universitat de Barcelona; Ministerio de Ciencia e Innovación; Wellcome Trust; National Science Foundation","keywords":"Biological dispersal; Ancient DNA; Plague (disease); Population; Demographic history; Rodent; Biology; Mediterranean climate; Geography; Zoology; Evolutionary biology; Ecology; Genetic diversity; Demography; Archaeology","score_opus":0.02104396145354599,"score_gpt":0.2838786608941206,"score_spread":0.26283469944057464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4225419614","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978834,0.0004169807,0.00084038725,0.000029492307,0.0000038469525,0.0000038281414,0.0003801533,0.00001235843,0.00042963674],"genre_scores_gemma":[0.99533504,0.00061140745,0.0017940246,0.000043394804,0.000008867017,0.000009061041,0.0015457717,0.00001692743,0.0006354437],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999012,0.000017768467,0.000005145142,0.00003785747,0.000015411326,0.000022733106],"domain_scores_gemma":[0.9997675,0.00004141303,0.00011724345,0.00001807249,0.000027834616,0.000027852435],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020916131,0.00019009695,0.00014264348,0.00088974804,0.00017056838,0.00022470007,0.000088998146,0.0001854164,0.0007776527],"category_scores_gemma":[0.00032399478,0.00010220284,0.0002600706,0.0005240166,0.00017089103,0.000116926916,0.00024652836,0.0002520038,0.00018705204],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008074019,0.000077708595,0.2666944,0.00021261202,0.00031425917,0.0005874021,0.0009876046,0.0008178828,0.67936045,0.00070445146,0.0002383907,0.049197435],"study_design_scores_gemma":[0.0000075873195,0.00008824191,0.9882939,0.000023055396,0.000071026116,0.00039630645,0.00014937924,0.0008155959,0.0075240326,0.00013470334,0.002487758,0.000008430085],"about_ca_topic_score_codex":0.0014265622,"about_ca_topic_score_gemma":0.0030428432,"teacher_disagreement_score":0.0014265622,"about_ca_system_score_codex":0.00012842509,"about_ca_system_score_gemma":0.00011598104,"threshold_uncertainty_score":0.0028365254},"labels":[],"label_agreement":null},{"id":"W4233724715","doi":"10.7287/peerj.preprints.1866","title":"Detection of a <i>Yersinia pestis </i>gene homologue in rodent samples","year":2016,"lang":"en","type":"preprint","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Yersinia pestis; Rodent; Biology; Gene; Yersinia; Microbiology; Genetics; Virology; Bacteria; Virulence; Ecology","score_opus":0.019831164784336972,"score_gpt":0.28507834415159333,"score_spread":0.26524717936725634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4233724715","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99321425,0.0005467337,0.0023986984,0.00005212421,0.000013733614,0.000024503206,0.0026191573,0.00008040179,0.0010504262],"genre_scores_gemma":[0.9798306,0.0007834372,0.007270754,0.00012518867,0.00001893624,0.00008576704,0.008887214,0.000040453484,0.0029575804],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986684,0.000010851757,0.000007693075,0.00005333822,0.000024125942,0.00003707351],"domain_scores_gemma":[0.9998716,0.000025611467,0.000037940885,0.000011080711,0.00002983088,0.00002392799],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000128585,0.00030869927,0.00025961033,0.0005349467,0.00018340453,0.0002895181,0.00010365466,0.0002529168,0.001028546],"category_scores_gemma":[0.00019704594,0.00015391628,0.00018930777,0.00039043408,0.000189406,0.00009409043,0.00015529865,0.00022389147,0.00045099622],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013470418,0.0000104264545,0.005937414,0.00003172497,0.000009797064,0.000062522944,0.000029678702,0.000018182325,0.99264246,0.000016725951,0.000036217854,0.0010701788],"study_design_scores_gemma":[0.000019187197,0.00080016407,0.3889647,0.000016759328,0.00007975384,0.0015530466,0.00029688745,0.0004665449,0.60342884,0.0000703754,0.0042927084,0.000010964517],"about_ca_topic_score_codex":0.00075965567,"about_ca_topic_score_gemma":0.0011488714,"teacher_disagreement_score":0.001028546,"about_ca_system_score_codex":0.00008810039,"about_ca_system_score_gemma":0.0001072942,"threshold_uncertainty_score":0.0034407973},"labels":[],"label_agreement":null},{"id":"W4233740658","doi":"10.1002/9781118396957.wbemlb021","title":"<scp>B</scp>lack<scp>D</scp>eath","year":2017,"lang":"en","type":"other","venue":"The Encyclopedia of Medieval Literature in Britain","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Plague (disease); Pandemic; Outbreak; History; Yersinia pestis; Geography; Population; Ancient history; Demography; Genealogy; Coronavirus disease 2019 (COVID-19); Ethnology; Sociology; Disease; Infectious disease (medical specialty); Medicine; Virology; Biology","score_opus":0.010032994819464056,"score_gpt":0.2815818630367831,"score_spread":0.27154886821731905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4233740658","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012921678,0.008479931,0.00054672,0.01007084,0.004826179,0.00003264018,0.0015115873,0.00047658442,0.9727633],"genre_scores_gemma":[0.0045961174,0.0040764785,0.00032133644,0.0009905669,0.00070094754,0.000017537222,0.00054001424,0.00032402168,0.98843294],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99965763,0.00006408983,0.000015913543,0.000041626325,0.00017832076,0.00004238661],"domain_scores_gemma":[0.9992944,0.00013215588,0.000056701756,0.00007133914,0.00022328942,0.0002221285],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00047593552,0.00053558755,0.00032072543,0.0016339677,0.0019038355,0.0052138595,0.0005458018,0.001182958,0.39709574],"category_scores_gemma":[0.0015267818,0.00016688382,0.00018133214,0.0021546613,0.0014598769,0.00272558,0.0024729655,0.0012977121,0.21853],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022648755,0.000018236316,0.00028394052,0.00028654683,0.0000025373183,0.00014478121,0.00048327743,0.00003317242,0.00037432997,0.012282216,0.8988935,0.08717479],"study_design_scores_gemma":[7.718248e-7,0.0000016571488,0.00027382726,0.00006522566,3.8565543e-7,0.0000599898,0.00013667444,0.000009676509,0.00006601736,0.0005502386,0.99883384,0.0000016706605],"about_ca_topic_score_codex":0.0044093467,"about_ca_topic_score_gemma":0.015055677,"teacher_disagreement_score":0.39709574,"about_ca_system_score_codex":0.0014769738,"about_ca_system_score_gemma":0.001282336,"threshold_uncertainty_score":0.85996974},"labels":[],"label_agreement":null},{"id":"W4234268668","doi":"10.5860/choice.49-5671","title":"Venomous reptiles of the United States, Canada, and Northern Mexico: v.2: Crotalus","year":2012,"lang":"en","type":"article","venue":"Choice Reviews Online","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Crotalus; Archaeology; Geography; Ecology; Biology; Venom","score_opus":0.021769100355609316,"score_gpt":0.29612273553349994,"score_spread":0.27435363517789063,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4234268668","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9576369,0.013351893,0.00068613794,0.0011884912,0.0000720632,0.00007570258,0.0015784779,0.000052822816,0.025357576],"genre_scores_gemma":[0.98216057,0.0060754344,0.0007167776,0.0002894962,0.000036522233,0.000023212975,0.0015418556,0.000016467766,0.009139581],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99980944,0.00001324774,0.000008117975,0.000038847178,0.000043513206,0.00008688084],"domain_scores_gemma":[0.9998282,0.0000074605477,0.00006870951,0.000005368089,0.00005342158,0.00003690206],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014729181,0.0003168671,0.00023995257,0.0021210115,0.0017582319,0.0006600907,0.00043641654,0.0003594956,0.004003509],"category_scores_gemma":[0.00024001457,0.000096513664,0.00016422178,0.0013228972,0.0008038695,0.00027058568,0.00058089313,0.00029961806,0.0005073995],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008202688,0.00008938966,0.74178344,0.0004744636,0.00015602208,0.0015886683,0.0032713462,0.0004316412,0.044078924,0.0023940217,0.006531638,0.19838013],"study_design_scores_gemma":[0.0000060475622,0.000055205463,0.9829228,0.00008754608,0.000022805247,0.0004923456,0.0016147447,0.00006644384,0.00088809227,0.000068472036,0.013768343,0.000007138706],"about_ca_topic_score_codex":0.5906365,"about_ca_topic_score_gemma":0.7917057,"teacher_disagreement_score":0.4093635,"about_ca_system_score_codex":0.002642118,"about_ca_system_score_gemma":0.0021900847,"threshold_uncertainty_score":0.8235487},"labels":[],"label_agreement":null},{"id":"W4235612899","doi":"10.1093/med/9780198570028.003.0028","title":"Yersiniosis and plague","year":2011,"lang":"en","type":"book","venue":"Oxford University Press eBooks","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Yersiniosis; Plague (disease); Yersinia enterocolitica; Medicine; Enteritis; Transmission (telecommunications); Serotype; Veterinary medicine; Environmental health; Virology; Biology; Internal medicine; Pathology","score_opus":0.02189515215006745,"score_gpt":0.22037238781398827,"score_spread":0.1984772356639208,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4235612899","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00067979156,0.50981605,0.0012897649,0.0055915597,0.008401397,0.000061958235,0.00043563038,0.00026582077,0.47345808],"genre_scores_gemma":[0.0030498072,0.1670295,0.0020477485,0.002967562,0.0032158191,0.00005028538,0.00055650633,0.00008310083,0.8209996],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99981993,0.000022390286,0.000010916286,0.000037695845,0.000091374975,0.000017583725],"domain_scores_gemma":[0.999866,0.000045287386,0.000014072364,0.0000128263355,0.000032892487,0.000028871918],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002623441,0.0012019583,0.0005745088,0.001125364,0.00053323875,0.0016952448,0.00047963017,0.0010107172,0.064228944],"category_scores_gemma":[0.00048242716,0.00026280424,0.00024984422,0.0016749342,0.000763858,0.0025649667,0.0010186528,0.0015879249,0.04416953],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000065189575,0.000039714978,0.00017501175,0.0006510896,0.0000066805383,0.00014342369,0.00016739138,0.00014698727,0.0014853211,0.025651954,0.5884852,0.38298205],"study_design_scores_gemma":[0.0000025111551,0.00001383329,0.00019936748,0.000102790436,0.0000011293583,0.00017269852,0.000012860468,0.000010380891,0.000033565677,0.0019882226,0.99746096,0.0000015736695],"about_ca_topic_score_codex":0.0015980965,"about_ca_topic_score_gemma":0.0034379796,"teacher_disagreement_score":0.064228944,"about_ca_system_score_codex":0.00078930956,"about_ca_system_score_gemma":0.00074855855,"threshold_uncertainty_score":0.21486723},"labels":[],"label_agreement":null},{"id":"W4235741694","doi":"10.1093/auk/121.4.1130","title":"Area Sensitivity in Grassland Passerines: Effects of Patch Size, Patch Shape, and Vegetation Structure on Bird Abundance and Occurrence in Southern Saskatchewan","year":2004,"lang":"en","type":"article","venue":"The Auk","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":141,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Water Security Agency; University of Regina","funders":"","keywords":"Sparrow; Passerine; Ecology; Grassland; Habitat; Habitat fragmentation; Abundance (ecology); Geography; Biology","score_opus":0.005186800537598375,"score_gpt":0.23564012415218333,"score_spread":0.23045332361458495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4235741694","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99964726,0.000025921292,0.000016062757,0.000011253679,5.593758e-7,0.000001986775,0.00014223128,0.0000011362084,0.00015362026],"genre_scores_gemma":[0.99937564,0.00005172986,0.00003499944,0.000018656488,7.217044e-7,0.0000045577726,0.00023667705,0.0000011289437,0.0002758714],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998049,0.000039122573,0.000016392496,0.000054813314,0.000037150206,0.00004753152],"domain_scores_gemma":[0.9993316,0.00013740505,0.00016719235,0.000040844407,0.00013344022,0.00018958136],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041402574,0.00022279374,0.00021407606,0.00063155603,0.00043583682,0.0004673109,0.00038917028,0.000246613,0.0017578496],"category_scores_gemma":[0.0007098916,0.00019771272,0.00023813087,0.00086915045,0.00050594343,0.00022294631,0.0004443219,0.00021895634,0.0002433384],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003872015,0.00001335449,0.99701357,0.0000065554405,0.000049116927,0.00005436328,0.00019175991,0.000112515896,0.0009984697,0.0000099166455,0.00008304801,0.0014286618],"study_design_scores_gemma":[0.000001128332,0.000010690145,0.9996785,0.0000018166877,0.0000040091986,0.000016886857,0.00014487738,0.00006781174,0.000030592357,0.00000390997,0.000038513695,0.0000011978121],"about_ca_topic_score_codex":0.5337636,"about_ca_topic_score_gemma":0.827895,"teacher_disagreement_score":0.4662364,"about_ca_system_score_codex":0.0018403158,"about_ca_system_score_gemma":0.0012699262,"threshold_uncertainty_score":0.9379643},"labels":[],"label_agreement":null},{"id":"W4237852704","doi":"10.1016/s0255-0857(21)02224-6","title":"GENETIC DIVERSITY OF PATHOGENIC MICROORGANISMS AND ITS MEDICAL AND PUBLIC HEALTH SIGNIFICANCE","year":2007,"lang":"en","type":"article","venue":"Indian Journal of Medical Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Microorganism; Diversity (politics); Genetic diversity; Public health; Biology; Microbiology; Genetics; Environmental health; Medicine; Political science; Bacteria; Nursing","score_opus":0.015901902118921053,"score_gpt":0.283086502363387,"score_spread":0.26718460024446594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237852704","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968861,0.0006538093,0.00032570964,0.00016359323,0.000008771128,0.000006989032,0.00036369343,0.0000046624705,0.0015866882],"genre_scores_gemma":[0.9989023,0.0003441701,0.00019024976,0.000024597935,0.000017333337,0.00000477092,0.00024486633,0.0000011806919,0.000270368],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99970055,0.000085505395,0.000025702699,0.000060188733,0.000056545534,0.00007153304],"domain_scores_gemma":[0.9995814,0.0001394268,0.00009640383,0.000022679547,0.00006655383,0.00009346133],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002067335,0.00013587014,0.00018902135,0.0016832527,0.00036390635,0.0004949447,0.00018897792,0.00035342714,0.0013437318],"category_scores_gemma":[0.0005271492,0.00010504092,0.00015293405,0.0013487444,0.00038593388,0.00021805987,0.00022701175,0.0003214065,0.00018861967],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017855424,0.0003094524,0.31085896,0.0001833076,0.00010378236,0.0010725505,0.0016339913,0.00042406868,0.64409286,0.0019816998,0.00030527078,0.037248425],"study_design_scores_gemma":[0.000025695737,0.00096657046,0.96102494,0.000026355316,0.00007208046,0.0050543775,0.0021656726,0.0004851566,0.02490275,0.0017684929,0.0034822712,0.000025661553],"about_ca_topic_score_codex":0.0007516361,"about_ca_topic_score_gemma":0.0004369775,"teacher_disagreement_score":0.0016832527,"about_ca_system_score_codex":0.00015892615,"about_ca_system_score_gemma":0.00022503175,"threshold_uncertainty_score":0.0044952035},"labels":[],"label_agreement":null},{"id":"W4237888909","doi":"10.1515/iupac.88.0573","title":"Cataract","year":2017,"lang":"en","type":"dataset","venue":"IUPAC Standards Online","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"","keywords":"Glossary; Terminology; Relation (database); Computer science; Linguistics; Philosophy; Data mining","score_opus":0.017664332499255333,"score_gpt":0.45575889232301164,"score_spread":0.43809455982375634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237888909","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013388033,0.000178708,0.0001794398,0.000173459,0.00007908949,0.000052888645,0.99484503,0.0004438569,0.0039135977],"genre_scores_gemma":[0.0005694638,0.00021966832,0.00060072565,0.00031933156,0.000027829929,0.00020350727,0.9944883,0.0001482501,0.0034229474],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974306,0.00041982357,0.00052367087,0.00083769235,0.00051564304,0.00027253423],"domain_scores_gemma":[0.9936884,0.0016625014,0.00073386094,0.0015540965,0.001989635,0.0003716103],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016161527,0.001323623,0.0013714398,0.004179441,0.00092917157,0.0035916856,0.0025249142,0.001856118,0.26057556],"category_scores_gemma":[0.015967174,0.0005527381,0.0015333776,0.0066212206,0.00042809785,0.0032562965,0.0026098508,0.0015244554,0.23547864],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011832229,0.000015426773,0.0011847202,0.001410025,0.000030790332,0.00002975378,0.000031442112,0.0000962381,0.00010388518,0.0011819851,0.98566204,0.010135354],"study_design_scores_gemma":[0.000090617,0.000011061215,0.0019303111,0.00060684205,0.000019708596,0.000056124594,0.00007047898,0.00008710016,0.00014778021,0.0013196059,0.9956435,0.000016872484],"about_ca_topic_score_codex":0.01217064,"about_ca_topic_score_gemma":0.022435034,"teacher_disagreement_score":0.26057556,"about_ca_system_score_codex":0.0015721029,"about_ca_system_score_gemma":0.003195498,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W4239370143","doi":"10.4000/vertigo.5087","title":"Jean-françois Desroches et David Rodrigue, Amphibiens et reptiles du Québec et des maritimes","year":2008,"lang":"fr","type":"article","venue":"VertigO","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Philosophy; Humanities","score_opus":0.02399365724512068,"score_gpt":0.2788381873319119,"score_spread":0.2548445300867912,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239370143","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.023734579,0.24243174,0.005029034,0.55657685,0.039895054,0.00020128685,0.0019822656,0.0004933431,0.12965587],"genre_scores_gemma":[0.0727705,0.090890914,0.0031374034,0.037007887,0.0039524334,0.00009991664,0.0005598643,0.00019771386,0.7913833],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.999361,0.00014854633,0.000021460213,0.00011239352,0.000250484,0.00010605835],"domain_scores_gemma":[0.99806863,0.00035831437,0.00010839924,0.00004107859,0.0008942687,0.0005293849],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015196218,0.00063857157,0.00042733928,0.0012189072,0.004536123,0.002293853,0.00090938044,0.0019492871,0.03864469],"category_scores_gemma":[0.0023510822,0.0003459903,0.00030438078,0.00088351587,0.0017722094,0.0018062082,0.0008911191,0.0024307522,0.007112372],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018266207,0.00008268168,0.011837942,0.00049956347,0.000042063508,0.0013735278,0.007075121,0.00034354097,0.0026492022,0.016099676,0.8263298,0.13348421],"study_design_scores_gemma":[0.000011348686,0.000025033998,0.014797124,0.0001573434,0.000009549882,0.00044332963,0.004144254,0.00015278572,0.00043769274,0.0014063533,0.9783652,0.000049986484],"about_ca_topic_score_codex":0.73430437,"about_ca_topic_score_gemma":0.8426382,"teacher_disagreement_score":0.26569563,"about_ca_system_score_codex":0.006583204,"about_ca_system_score_gemma":0.007932577,"threshold_uncertainty_score":0.53452075},"labels":[],"label_agreement":null},{"id":"W4239767890","doi":"10.1590/s1984-29612010000100013","title":"Avaliação de diferentes dietas merídicas sobre a emergência de adultos de Ctenocephalides felis felis (Siphonaptera : Pulicidae)","year":2010,"lang":"pt","type":"article","venue":"Revista Brasileira de Parasitologia Veterinária/Brazilian Journal of Veterinary Parasitology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Felis; Biology; Veterinary medicine; Medicine; CATS","score_opus":0.027519423770145886,"score_gpt":0.35160493145943883,"score_spread":0.32408550768929295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239767890","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983912,0.0005326319,0.00016154749,0.00002258692,0.0000072225603,0.00001822368,0.00016774797,0.0000051091906,0.0006935807],"genre_scores_gemma":[0.9935875,0.0010266926,0.001671121,0.00009198738,0.000009539188,0.00004699815,0.00035882113,0.000007106555,0.0032001317],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998136,0.00002500232,0.000013783859,0.00006486679,0.00005084747,0.00003184965],"domain_scores_gemma":[0.9994955,0.00012366648,0.00013690029,0.000019383197,0.00013516028,0.00008939685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031402396,0.00039448633,0.0004463409,0.00027096207,0.00026437695,0.0005605181,0.00025038124,0.0004265629,0.0012012349],"category_scores_gemma":[0.0003264722,0.00016934244,0.00032425128,0.000216687,0.0002485183,0.00027132736,0.0002697298,0.00036869032,0.00015271067],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00084436726,0.00025548408,0.03194069,0.0004076469,0.000059635822,0.00017730465,0.0002756723,0.00023153,0.95647794,0.000047517085,0.000065931315,0.009216266],"study_design_scores_gemma":[0.0000373792,0.013550343,0.6349122,0.00010930279,0.00031815344,0.00024945693,0.0013760111,0.0009325628,0.34338796,0.00010267126,0.0049888603,0.000035082274],"about_ca_topic_score_codex":0.0023275975,"about_ca_topic_score_gemma":0.009252084,"teacher_disagreement_score":0.0023275975,"about_ca_system_score_codex":0.0004652827,"about_ca_system_score_gemma":0.0003710694,"threshold_uncertainty_score":0.004628122},"labels":[],"label_agreement":null},{"id":"W4243812180","doi":"10.14740/jmc2931w","title":"<i>Yersinia enterocolitica</i> Bloodstream Infection","year":2017,"lang":"en","type":"article","venue":"Journal of Medical Cases","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Yersinia enterocolitica; Bloodstream infection; Complication; Abdominal pain; Constipation; Abdominal aortic aneurysm; Peritonitis; Surgery; Internal medicine; Aneurysm; Bacteria","score_opus":0.025461313420464145,"score_gpt":0.3580860460148522,"score_spread":0.3326247325943881,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4243812180","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89440316,0.014980769,0.0030613097,0.012867697,0.0009310556,0.00016816934,0.0013615255,0.0005514228,0.07167488],"genre_scores_gemma":[0.9886495,0.00247359,0.0007519157,0.001620866,0.00046232954,0.000013177478,0.0003717598,0.000020362782,0.0056364564],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99986815,0.000013951355,0.00001736006,0.000026994412,0.00002005339,0.000053486165],"domain_scores_gemma":[0.9998153,0.000034970486,0.00005940697,0.000009651872,0.00002465143,0.000056043802],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008374148,0.00055829604,0.00037172373,0.00072462857,0.0006089148,0.00046697736,0.00026617927,0.0011238331,0.0042764293],"category_scores_gemma":[0.0005808148,0.00017169559,0.0003319264,0.0004872495,0.00045720147,0.00060953264,0.00031917528,0.00094342686,0.0009097847],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012956442,0.000044039007,0.027758896,0.000095268966,0.000012801167,0.9589924,0.00017079002,0.000054195414,0.0041653803,0.0004093164,0.003924211,0.004243045],"study_design_scores_gemma":[0.000011288297,0.00009398491,0.029963013,0.00007033051,0.000027925673,0.96016824,0.000219665,0.00017541887,0.0025693714,0.00032108967,0.0063655963,0.0000140514885],"about_ca_topic_score_codex":0.0020480752,"about_ca_topic_score_gemma":0.0017218229,"teacher_disagreement_score":0.0042764293,"about_ca_system_score_codex":0.00043286293,"about_ca_system_score_gemma":0.00029633008,"threshold_uncertainty_score":0.014306068},"labels":[],"label_agreement":null},{"id":"W4243837194","doi":"10.1079/dmpd/20046500323","title":"<i>Leptosphaeria avenaria</i> . [Distribution map].","year":2008,"lang":"en","type":"article","venue":"Distribution Maps of Plant Diseases","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Geography; Distribution (mathematics); Avena; Irish; Environmental protection; Biology; Ecology","score_opus":0.01176173569545635,"score_gpt":0.243897739072966,"score_spread":0.23213600337750964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4243837194","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.013391258,0.004262862,0.0030457296,0.0015382752,0.00093305996,0.0005929018,0.867781,0.0017591341,0.10669575],"genre_scores_gemma":[0.02610089,0.0034101082,0.0075973533,0.00034044284,0.00018816274,0.00035884598,0.93713045,0.00020370737,0.024670037],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99989283,0.00001254818,0.000008712734,0.000027949513,0.000029757297,0.000028163247],"domain_scores_gemma":[0.99968815,0.000048979924,0.00009914307,0.000013671276,0.00009577428,0.000054268185],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000119943135,0.0010586632,0.0004963933,0.0042053475,0.0004578319,0.0006408423,0.00072267867,0.00041292247,0.07286013],"category_scores_gemma":[0.0004559118,0.00034430574,0.00030059856,0.007273109,0.00029195345,0.0005219777,0.00042248835,0.0006999726,0.035385687],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00075095857,0.00009654589,0.008253292,0.006017043,0.000065767286,0.00078889297,0.00055577664,0.0010512018,0.021530293,0.002015032,0.79808116,0.16079397],"study_design_scores_gemma":[0.000078941404,0.000043805547,0.05096138,0.00020985815,0.000017111819,0.0003204963,0.00011486781,0.00019881479,0.0006077423,0.00028241277,0.9471488,0.000015914931],"about_ca_topic_score_codex":0.025679838,"about_ca_topic_score_gemma":0.017784262,"teacher_disagreement_score":0.07286013,"about_ca_system_score_codex":0.0005781942,"about_ca_system_score_gemma":0.0006642422,"threshold_uncertainty_score":0.2437414},"labels":[],"label_agreement":null},{"id":"W4246230452","doi":"10.1079/dmpd/20056500323","title":"<i>Leptosphaeria avenaria</i> . [Distribution map].","year":2005,"lang":"en","type":"article","venue":"Distribution Maps of Plant Diseases","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Distribution (mathematics); Geography; Avena; Environmental protection; Ecology; Biology","score_opus":0.008423800574842866,"score_gpt":0.24869865871472469,"score_spread":0.2402748581398818,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4246230452","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011535457,0.004210569,0.002733689,0.0015637218,0.00093880005,0.000585061,0.8622284,0.0016638621,0.11454044],"genre_scores_gemma":[0.02476579,0.0035019203,0.0067964364,0.00037153048,0.00019549046,0.00035160975,0.93492824,0.0001978386,0.028891133],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.999884,0.0000132616215,0.000009709139,0.00002872709,0.00003554088,0.000028808658],"domain_scores_gemma":[0.9996792,0.000047234284,0.000103669205,0.000015002716,0.00010057617,0.000054317094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012500057,0.0011265068,0.00051367685,0.0041937185,0.0004820539,0.0006810994,0.00076998165,0.00041832085,0.07387535],"category_scores_gemma":[0.00044699595,0.00036323254,0.00030777827,0.0070746127,0.0002919234,0.0005435455,0.00043518792,0.0006975536,0.039846547],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006171631,0.00008325363,0.007613367,0.005329897,0.000057411242,0.0007445221,0.00047826258,0.0008838136,0.017449822,0.0017786473,0.809542,0.15542178],"study_design_scores_gemma":[0.00006526067,0.000040845513,0.04536254,0.00019825152,0.00001517655,0.00031689144,0.00009742813,0.00016311613,0.00053774455,0.0002492579,0.9529384,0.000015022757],"about_ca_topic_score_codex":0.025363147,"about_ca_topic_score_gemma":0.01875845,"teacher_disagreement_score":0.07387535,"about_ca_system_score_codex":0.00060375314,"about_ca_system_score_gemma":0.00064788805,"threshold_uncertainty_score":0.24713767},"labels":[],"label_agreement":null},{"id":"W4246901280","doi":"10.1139/w00-015","title":"Arsenic and cadmium resistance in environmental isolates of <i>Yersinia enterocolitica</i> and <i>Yersinia intermedia</i>","year":2000,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Yersinia enterocolitica; Microbiology; Arsenic; Virulence; Yersinia; Strain (injury); Biology; Enterobacteriaceae; Bacteria; Chemistry; Escherichia coli; Gene; Biochemistry; Genetics","score_opus":0.003754332096423771,"score_gpt":0.20194533798546693,"score_spread":0.19819100588904315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4246901280","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990388,0.00017091348,0.00013878958,0.000023404129,0.0000044221074,0.000012451361,0.0003670958,0.000004845068,0.00023923925],"genre_scores_gemma":[0.9962639,0.00035621919,0.000768005,0.00002694188,0.000008186788,0.000028604529,0.0017979498,0.0000050460726,0.000744996],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995185,0.0001114669,0.00008789564,0.000101261285,0.00010321378,0.00007759878],"domain_scores_gemma":[0.9996106,0.00010388546,0.0001134771,0.000033032444,0.000096333584,0.000042755153],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028212953,0.00040833536,0.0002718144,0.0003519959,0.00019286531,0.00040148007,0.00018342586,0.00031118878,0.0004559763],"category_scores_gemma":[0.0006373826,0.00017265978,0.0001983742,0.0006058256,0.00021714426,0.0001765841,0.0002550823,0.00029966174,0.00017590821],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006345532,0.0002301022,0.04823714,0.00016625103,0.000058435628,0.00044534428,0.0003712112,0.00025122173,0.9458032,0.000058600926,0.00014700722,0.00359694],"study_design_scores_gemma":[0.00005621875,0.0040010884,0.5415407,0.000042792348,0.00017716107,0.0038295852,0.00147659,0.0012201112,0.4439275,0.00007919545,0.003613002,0.00003601958],"about_ca_topic_score_codex":0.002434405,"about_ca_topic_score_gemma":0.0018189836,"teacher_disagreement_score":0.002434405,"about_ca_system_score_codex":0.00023805846,"about_ca_system_score_gemma":0.00023891202,"threshold_uncertainty_score":0.004840553},"labels":[],"label_agreement":null},{"id":"W4249289639","doi":"10.4095/308394","title":"Glissements de terrain historiques qui ont causé des décès au Canada (1771-2018)","year":2018,"lang":"fr","type":"report","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Natural Resources Canada","funders":"","keywords":"Humanities; Geology; Art","score_opus":0.025997753288541998,"score_gpt":0.3014079528377815,"score_spread":0.2754101995492395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4249289639","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7751011,0.004679745,0.0012620372,0.0042406665,0.0010469493,0.00030989628,0.027074803,0.00029051446,0.18599422],"genre_scores_gemma":[0.7034894,0.005449014,0.0023083142,0.00059765315,0.00019082504,0.000079751364,0.010310412,0.00009777587,0.27747685],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99937755,0.000012741574,0.00001174082,0.000042468713,0.00033523847,0.0002202165],"domain_scores_gemma":[0.99894756,0.000051295036,0.000118300304,0.0000359032,0.0006023453,0.00024472194],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023976961,0.00043821224,0.00019096825,0.0023131259,0.004722859,0.0015433047,0.0005214173,0.00070021313,0.010164394],"category_scores_gemma":[0.0012397552,0.0001891389,0.0003616523,0.0030845336,0.0012322195,0.0004395571,0.0014303412,0.0013884016,0.0012206144],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00074496394,0.00023846357,0.45617154,0.0007519662,0.00021850484,0.0206255,0.0394209,0.0022199026,0.010590044,0.014712103,0.1820437,0.2722623],"study_design_scores_gemma":[0.000010396739,0.00005117249,0.5741245,0.00020872493,0.00002663792,0.0013460092,0.015180052,0.0002588301,0.0021658884,0.00045003844,0.40613297,0.000044747834],"about_ca_topic_score_codex":0.9705494,"about_ca_topic_score_gemma":0.98936135,"teacher_disagreement_score":0.029450595,"about_ca_system_score_codex":0.015235909,"about_ca_system_score_gemma":0.019772928,"threshold_uncertainty_score":0.11054474},"labels":[],"label_agreement":null},{"id":"W4249798656","doi":"10.4095/326166","title":"Glissements de terrain historiques ayant causé des décès au Canada (1771-2019)","year":2020,"lang":"fr","type":"report","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Natural Resources Canada","funders":"","keywords":"Geology; Humanities; Art","score_opus":0.024678877393854864,"score_gpt":0.29352967471625024,"score_spread":0.26885079732239536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4249798656","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6983148,0.0061708447,0.0012325157,0.0029666147,0.00060599414,0.0003261803,0.12508315,0.0003242385,0.16497575],"genre_scores_gemma":[0.65913683,0.00796649,0.002896129,0.0004356505,0.00012041833,0.00011021065,0.047522712,0.000114994626,0.2816966],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99957293,0.000009185178,0.000008856142,0.000034453176,0.00022062872,0.00015392162],"domain_scores_gemma":[0.99914646,0.000035798224,0.000088211185,0.000024218942,0.00050879567,0.00019645774],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020599131,0.00041432245,0.00018217647,0.0028630039,0.0025351236,0.0014036709,0.0004678995,0.00045150923,0.012117875],"category_scores_gemma":[0.00090817467,0.00016160173,0.00041685376,0.00508252,0.0005885521,0.0003388405,0.0010200304,0.000849185,0.0015689983],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006792271,0.00018097121,0.52905256,0.00094960316,0.00028637287,0.0057652653,0.013649285,0.003745702,0.0054660873,0.0075359996,0.17737475,0.25531417],"study_design_scores_gemma":[0.0000086359605,0.000030903157,0.78698593,0.00013174028,0.000021408645,0.0003473364,0.0067297164,0.0003891586,0.0009023581,0.00021201435,0.20421053,0.000030286019],"about_ca_topic_score_codex":0.9884417,"about_ca_topic_score_gemma":0.99571925,"teacher_disagreement_score":0.016407935,"about_ca_system_score_codex":0.016407935,"about_ca_system_score_gemma":0.021742,"threshold_uncertainty_score":0.119048476},"labels":[],"label_agreement":null},{"id":"W4252146406","doi":"10.3410/f.718544357.793499146","title":"Faculty Opinions recommendation of Evolution of acute infections and the invasion-persistence trade-off.","year":2014,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Persistence (discontinuity); Biology; Evolutionary biology; Medicine; Genealogy; Geography; History; Geology","score_opus":0.021555193587783083,"score_gpt":0.333051626738961,"score_spread":0.3114964331511779,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4252146406","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003376465,0.0002046711,0.00007784079,0.00017266754,0.00003805565,0.000007991524,0.9982774,0.00022417582,0.0006594784],"genre_scores_gemma":[0.0017819967,0.00019243681,0.00035369795,0.00015032744,0.0000260311,0.00004422713,0.99610484,0.00006812072,0.0012782427],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987565,0.00022241178,0.00013005472,0.000422423,0.0003075186,0.0001610856],"domain_scores_gemma":[0.99525213,0.0016585833,0.0008018392,0.000844999,0.00087774196,0.00056471664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001593982,0.0015962488,0.001433608,0.003117236,0.00053658674,0.0025163696,0.0025991595,0.0023754316,0.06374228],"category_scores_gemma":[0.014189305,0.0005570674,0.0017726405,0.0047718654,0.0003104912,0.0014176395,0.001546404,0.0015306431,0.043488573],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016501108,0.000026385182,0.0067312224,0.0011596114,0.00017510461,0.000025837342,0.000014015364,0.00043911106,0.00012907243,0.0003806203,0.98605204,0.0047020265],"study_design_scores_gemma":[0.00058824616,0.000044697517,0.030224236,0.0007557698,0.00030288118,0.00016435076,0.00006084453,0.0016544291,0.00049171655,0.0020487106,0.96361214,0.000051946885],"about_ca_topic_score_codex":0.02077004,"about_ca_topic_score_gemma":0.047695257,"teacher_disagreement_score":0.06374228,"about_ca_system_score_codex":0.0013918332,"about_ca_system_score_gemma":0.0026843704,"threshold_uncertainty_score":0.2132392},"labels":[],"label_agreement":null},{"id":"W4254162945","doi":"10.7287/peerj.preprints.1866v1","title":"Detection of a <i>Yersinia pestis </i>gene homologue in rodent samples","year":2016,"lang":"en","type":"preprint","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Yersinia pestis; Rodent; Biology; Yersinia; Gene; Microbiology; Microarray; Genetics; Virology; Bacteria; Virulence; Gene expression; Ecology","score_opus":0.019831164784336972,"score_gpt":0.28507834415159333,"score_spread":0.26524717936725634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4254162945","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99321425,0.0005467339,0.0023986984,0.00005212421,0.000013733601,0.000024503206,0.002619156,0.000080401864,0.0010504256],"genre_scores_gemma":[0.9798306,0.00078343647,0.007270754,0.00012518867,0.000018936224,0.00008576696,0.008887207,0.000040453484,0.002957579],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986684,0.000010851767,0.000007693067,0.000053338168,0.000024125942,0.000037073474],"domain_scores_gemma":[0.9998716,0.000025611467,0.00003794092,0.000011080721,0.00002983091,0.00002392799],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012858513,0.00030869927,0.00025961033,0.000534947,0.00018340453,0.00028951783,0.00010365486,0.0002529168,0.001028545],"category_scores_gemma":[0.00019704594,0.00015391628,0.0001893076,0.00039043353,0.000189406,0.00009409035,0.00015529865,0.00022389147,0.00045099622],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013470431,0.0000104264545,0.0059374254,0.00003172497,0.000009797064,0.000062523,0.000029678702,0.000018182378,0.99264246,0.00001672597,0.000036217883,0.0010701793],"study_design_scores_gemma":[0.000019187191,0.00080016465,0.3889648,0.000016759323,0.00007975381,0.0015530469,0.00029688765,0.000466545,0.60342866,0.000070375514,0.004292709,0.000010964513],"about_ca_topic_score_codex":0.0007596553,"about_ca_topic_score_gemma":0.0011488704,"teacher_disagreement_score":0.001028545,"about_ca_system_score_codex":0.0000881003,"about_ca_system_score_gemma":0.0001072942,"threshold_uncertainty_score":0.0034407973},"labels":[],"label_agreement":null},{"id":"W4254340936","doi":"10.1016/s0008-4182(01)80102-2","title":"Bienvenue","year":2001,"lang":"en","type":"article","venue":"Canadian Journal of Ophthalmology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Political science","score_opus":0.023815764373638214,"score_gpt":0.29360970137282255,"score_spread":0.26979393699918436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4254340936","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0024239742,0.023907308,0.0010554424,0.0017696955,0.0020447653,0.00006834437,0.0048515,0.0010854421,0.9627934],"genre_scores_gemma":[0.007506835,0.007132611,0.0019203736,0.00035825162,0.00027396632,0.000073873445,0.0021312712,0.00036628277,0.98023635],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991769,0.00005476405,0.000060802387,0.00034279047,0.00020219837,0.00016254472],"domain_scores_gemma":[0.9994923,0.00011764289,0.00004786176,0.0000758591,0.00011054256,0.00015574734],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00048462194,0.0022512365,0.0011923425,0.0020688274,0.0018671998,0.003081144,0.001047953,0.0027138623,0.83738774],"category_scores_gemma":[0.00081043364,0.0004704969,0.0005994579,0.002596874,0.00056713726,0.0018044302,0.0023030413,0.0019728136,0.77943647],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028016148,0.00015510352,0.0012379276,0.0007402229,0.000031141997,0.0010325552,0.00013317527,0.00030054228,0.0037067134,0.0148143945,0.15551834,0.82204974],"study_design_scores_gemma":[0.00004826259,0.000051828,0.0017173858,0.00021239168,0.00001640576,0.0013017945,0.0000683215,0.00014073742,0.00043956272,0.0017150757,0.9942768,0.000011567732],"about_ca_topic_score_codex":0.002542304,"about_ca_topic_score_gemma":0.003713978,"teacher_disagreement_score":0.16261226,"about_ca_system_score_codex":0.00064057123,"about_ca_system_score_gemma":0.0007600978,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W4256683469","doi":"10.1017/rqx.2019.167","title":": <i>Murder in Renaissance Italy</i>","year":2019,"lang":"en","type":"article","venue":"Renaissance Quarterly","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"","keywords":"The Renaissance; History; Classics; Art; Art history","score_opus":0.007096433908664314,"score_gpt":0.258800974009112,"score_spread":0.2517045401004477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4256683469","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.82863766,0.038153995,0.00022134415,0.084353596,0.0037445042,0.00008162093,0.003964703,0.00009168079,0.040750917],"genre_scores_gemma":[0.95710224,0.010785893,0.00012257806,0.0043432675,0.002774742,0.000039671817,0.0015466294,0.000026412212,0.023258623],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997204,0.000075097625,0.000017710074,0.000036223213,0.00003854625,0.000111958114],"domain_scores_gemma":[0.9995372,0.000058847236,0.00018116097,0.000018166676,0.00006424279,0.0001404545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005520549,0.00021204868,0.00017297681,0.0013228726,0.0011192114,0.00089495705,0.00054952136,0.0015803756,0.011755724],"category_scores_gemma":[0.0012655135,0.00012661057,0.00016448113,0.001281521,0.0010557872,0.0005718365,0.001164439,0.0010209194,0.00079502433],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044291007,0.00020129049,0.4214242,0.00095172087,0.00009076426,0.0082415,0.052684274,0.00022001177,0.0010232484,0.0047576735,0.41866076,0.0913017],"study_design_scores_gemma":[0.000011333933,0.000096478,0.88514215,0.00023139433,0.000013938171,0.002047425,0.013768637,0.000041491465,0.00009072756,0.00019970814,0.09834417,0.000012559515],"about_ca_topic_score_codex":0.12675962,"about_ca_topic_score_gemma":0.22513922,"teacher_disagreement_score":0.12675962,"about_ca_system_score_codex":0.0025202527,"about_ca_system_score_gemma":0.0012921478,"threshold_uncertainty_score":0.2520436},"labels":[],"label_agreement":null},{"id":"W4280535017","doi":"10.1002/wlb3.01048","title":"Prairie dogs, cattle subsidies and alternative prey: seasonal and spatial variation in coyote diet in a temperate grassland","year":2022,"lang":"en","type":"article","venue":"Wildlife Biology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan; Assiniboine Community College; Toronto Zoo; University of Winnipeg; Manitoba Beekeepers' Association","funders":"Natural Sciences and Engineering Research Council of Canada; Parks Canada","keywords":"Odocoileus; Carrion; Predation; Ecology; Prairie dog; Grassland; Cynomys ludovicianus; Foraging; Biology; Grazing; Ursus; Geography; Population","score_opus":0.011695585850024861,"score_gpt":0.2748732209118759,"score_spread":0.26317763506185105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280535017","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999788,0.000033891916,0.000013559191,0.0000053027657,6.2098775e-7,0.0000012427818,0.00007887204,7.290145e-7,0.00007780209],"genre_scores_gemma":[0.9995633,0.00003394148,0.000044656867,0.000009582293,0.000001556549,0.0000041094872,0.00020070089,0.0000010894729,0.0001410858],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999795,0.00005075501,0.000015637288,0.00006822015,0.000026336576,0.00004403607],"domain_scores_gemma":[0.9991574,0.00018479668,0.000324958,0.000049803522,0.00008948259,0.00019362205],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037346367,0.00012377545,0.00018285954,0.00075849943,0.0003318109,0.00046969677,0.0003058057,0.00035984573,0.0009838593],"category_scores_gemma":[0.0007262238,0.00023335601,0.00018372238,0.00076403783,0.00051149627,0.00029597516,0.00041208154,0.00023658315,0.00021031118],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005237782,0.00002707953,0.9981943,0.0000048376405,0.000032728418,0.000029953906,0.0002496579,0.000027227548,0.0007721233,0.000006620586,0.000045371005,0.0005578079],"study_design_scores_gemma":[5.3052804e-7,0.000008421949,0.9997172,0.0000011269647,0.0000024542974,0.000021888667,0.00017088559,0.000043045828,0.000010195751,0.0000018219807,0.000021699925,6.8757845e-7],"about_ca_topic_score_codex":0.033902295,"about_ca_topic_score_gemma":0.14467399,"teacher_disagreement_score":0.033902295,"about_ca_system_score_codex":0.00045279515,"about_ca_system_score_gemma":0.00024918807,"threshold_uncertainty_score":0.06740993},"labels":[],"label_agreement":null},{"id":"W4283397478","doi":"10.1007/s13364-022-00641-7","title":"Decadal trends in a population of urban white-tailed jackrabbits at the northern edge of its range","year":2022,"lang":"en","type":"article","venue":"Mammal Research","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The King's University; University of Alberta","funders":"","keywords":"Geography; Urbanization; Ecology; Wildlife; Range (aeronautics); Habitat; Population; Population density; Population decline; Biological dispersal; Biology; Demography","score_opus":0.0385164013650666,"score_gpt":0.3432828249795642,"score_spread":0.3047664236144976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283397478","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996536,0.000019984738,0.000025656505,0.000015909884,0.0000013873108,7.2380914e-7,0.00009773051,0.000001288421,0.00018370997],"genre_scores_gemma":[0.9993673,0.000029170711,0.000039774903,0.000009847749,0.000002364878,0.0000017135442,0.00017062305,6.387116e-7,0.00037866007],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9999502,0.0000072575394,0.0000029874434,0.000017858287,0.00000646145,0.000015341298],"domain_scores_gemma":[0.9997973,0.000019916237,0.000056172063,0.00001087484,0.000044007837,0.00007184202],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000119395634,0.00007720292,0.00009029528,0.00038030525,0.0002673212,0.0002987498,0.0001473258,0.00019723579,0.0011062045],"category_scores_gemma":[0.00019796041,0.000091602335,0.00008050977,0.0003456466,0.00020067135,0.00025077592,0.00017879068,0.00021075,0.00019470672],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011927903,0.000036414734,0.9950069,0.000005323975,0.000020754944,0.00006525015,0.0005062042,0.00010320603,0.0022146644,0.000043846667,0.00013926218,0.0017388155],"study_design_scores_gemma":[9.591112e-7,0.00002170393,0.99923635,8.596006e-7,0.000004045073,0.000056825404,0.00040240886,0.00009757128,0.00004177255,0.0000066256657,0.00012995288,8.8189e-7],"about_ca_topic_score_codex":0.023781167,"about_ca_topic_score_gemma":0.054717284,"teacher_disagreement_score":0.023781167,"about_ca_system_score_codex":0.00026956497,"about_ca_system_score_gemma":0.00014795989,"threshold_uncertainty_score":0.047285497},"labels":[],"label_agreement":null},{"id":"W4284960755","doi":"10.1139/cjm-2021-0314","title":"The cyclic AMP receptor protein (CRP) controls expression of the ferric uptake regulator (Fur) in <i>Yersinia pestis</i>","year":2022,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Yersinia pestis; Biology; cAMP receptor protein; Regulon; Transcription (linguistics); Gene; Transcriptional regulation; Promoter; Primer extension; Molecular biology; Regulation of gene expression; Gene expression; Genetics; Messenger RNA; Virulence","score_opus":0.008345289651897419,"score_gpt":0.2239449601535673,"score_spread":0.21559967050166987,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4284960755","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98896676,0.0034247155,0.0042112344,0.0003056157,0.000053974785,0.000030160336,0.0005237124,0.0001701619,0.0023135475],"genre_scores_gemma":[0.99389476,0.0008987378,0.0021496466,0.000108438195,0.000015737036,0.000024726027,0.0006065158,0.000020951253,0.0022805487],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979275,0.000026634132,0.000011390457,0.000049691014,0.00004766485,0.00007184909],"domain_scores_gemma":[0.9999145,0.00001741871,0.000023495388,0.000005543661,0.000020380932,0.000018683557],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016413459,0.00033058546,0.0002466003,0.00030312478,0.00030585183,0.00032501415,0.00017810497,0.00031882373,0.00068781676],"category_scores_gemma":[0.00021568642,0.00019374226,0.00024340616,0.00019280076,0.00034710928,0.00019652207,0.00025470415,0.00035970355,0.00030048768],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004076018,0.0000065515937,0.00019649685,0.00001352975,8.8157344e-7,0.000037699054,0.000018430455,0.000026272515,0.9991358,0.00004818275,0.000034144505,0.00044136005],"study_design_scores_gemma":[0.000027975997,0.00023813773,0.04259451,0.000017698489,0.0000148676645,0.00043896245,0.00020741625,0.0024613712,0.949794,0.00023026092,0.0039498466,0.000024988904],"about_ca_topic_score_codex":0.0077517177,"about_ca_topic_score_gemma":0.006283881,"teacher_disagreement_score":0.0077517177,"about_ca_system_score_codex":0.0007645065,"about_ca_system_score_gemma":0.00051837316,"threshold_uncertainty_score":0.015413165},"labels":[],"label_agreement":null},{"id":"W4285112149","doi":"10.1007/978-3-030-98449-6","title":"Ethology and Behavioral Ecology of Mysticetes","year":2022,"lang":"en","type":"book","venue":"Ethology and behavioral ecology of marine mammals","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministère des Ressources naturelles et des Forêts","funders":"","keywords":"Ethology; Ecology; Behavioral ecology; Zoology; Biology","score_opus":0.027858965003351083,"score_gpt":0.33705828097318974,"score_spread":0.30919931596983863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285112149","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4567367,0.08204522,0.0026123882,0.0028438384,0.0009775689,0.00009437395,0.0004782493,0.00011490573,0.4540968],"genre_scores_gemma":[0.60344505,0.056154694,0.0043506417,0.001112693,0.0009397914,0.0001451918,0.0008876298,0.00014405463,0.33282024],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99993515,0.0000099944245,0.0000052592936,0.000016664979,0.00002435828,0.000008571559],"domain_scores_gemma":[0.99994075,0.000021812182,0.000012263631,0.0000059775807,0.000009274829,0.000009899034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010417905,0.0002759221,0.00019352292,0.0006207991,0.00051886006,0.0007780219,0.00024185554,0.00022668431,0.006850909],"category_scores_gemma":[0.00031983384,0.00014399957,0.00011861955,0.00044146623,0.00085002894,0.0006049861,0.0008001251,0.00046270256,0.0007817392],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020897231,0.00019902698,0.04671843,0.0015499298,0.000058003672,0.0038161573,0.01572589,0.0010961161,0.053172387,0.042919964,0.030815778,0.8037194],"study_design_scores_gemma":[0.000014698416,0.0004261341,0.34136206,0.0004978277,0.000028428833,0.006723226,0.0024030998,0.00046756465,0.0015042912,0.0068288376,0.6397142,0.000029667866],"about_ca_topic_score_codex":0.0012336287,"about_ca_topic_score_gemma":0.0045550326,"teacher_disagreement_score":0.006850909,"about_ca_system_score_codex":0.00025095962,"about_ca_system_score_gemma":0.00020716719,"threshold_uncertainty_score":0.022918522},"labels":[],"label_agreement":null},{"id":"W4285294000","doi":"10.5751/ace-02174-170132","title":"Seabird predation effects and population viability analysis indicate the urgent need for rat eradication from Europa Island, western Indian Ocean","year":2022,"lang":"en","type":"article","venue":"Avian Conservation and Ecology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Terres Australes et Antarctiques Françaises","keywords":"Seabird; Predation; Indian ocean; Population; Population viability analysis; Geography; Pacific ocean; Ecology; Fishery; Biology; Oceanography; Habitat; Endangered species; Medicine; Geology; Environmental health","score_opus":0.009168036864975061,"score_gpt":0.2520892365833365,"score_spread":0.24292119971836143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285294000","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99802643,0.0003853907,0.00009049677,0.00010883178,0.000005567217,0.0000036965464,0.0003338106,0.0000072725516,0.0010385627],"genre_scores_gemma":[0.9981735,0.00028898174,0.0002393694,0.00008253143,0.0000054130355,0.0000038256776,0.0005081617,0.0000034749876,0.00069475535],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997274,0.00006310639,0.000025653138,0.000044369903,0.00006679145,0.00007277257],"domain_scores_gemma":[0.99884003,0.0001437811,0.00048572652,0.000060053826,0.00020067257,0.00026982592],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00062078785,0.00028483468,0.00018817365,0.00074627,0.00028957965,0.000552614,0.00026484494,0.0002200954,0.0021187034],"category_scores_gemma":[0.0006705157,0.00012600282,0.00033839405,0.00045766722,0.00041306246,0.00023157556,0.00034051423,0.00028557485,0.00027784388],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002823136,0.00004925607,0.9831314,0.00001959699,0.00009260446,0.00013955585,0.000076980745,0.00010752226,0.007905443,0.000031750136,0.00019024502,0.007973299],"study_design_scores_gemma":[0.0000010910292,0.000045344223,0.99937147,0.0000017915544,0.000011802076,0.000044138436,0.00011048631,0.000034331642,0.000264639,0.0000071040035,0.000106054824,0.0000017722058],"about_ca_topic_score_codex":0.017802946,"about_ca_topic_score_gemma":0.037228104,"teacher_disagreement_score":0.017802946,"about_ca_system_score_codex":0.00031389252,"about_ca_system_score_gemma":0.0002844005,"threshold_uncertainty_score":0.035398662},"labels":[],"label_agreement":null},{"id":"W4285356833","doi":"10.4000/hommesmigrations.13448","title":"Mica","year":2021,"lang":"fr","type":"article","venue":"Hommes & migrations","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"World Federation of Science Journalists","funders":"","keywords":"Mica; Materials science; Composite material","score_opus":0.016622664950531316,"score_gpt":0.295181228344943,"score_spread":0.27855856339441165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285356833","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0058940253,0.022043647,0.0040498883,0.03421077,0.018999176,0.00022045734,0.0037354715,0.0029970917,0.90784955],"genre_scores_gemma":[0.017295085,0.006134953,0.0017309522,0.004962682,0.0014989997,0.00009496755,0.0017423492,0.0006036718,0.9659363],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99847096,0.00016610838,0.000063194755,0.00044066127,0.00063257315,0.00022640367],"domain_scores_gemma":[0.99810934,0.00014216952,0.00014997217,0.00018508144,0.00075953326,0.0006539773],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010164508,0.0010208674,0.000635796,0.0013854351,0.0020166326,0.0042284117,0.001103097,0.002127695,0.43876457],"category_scores_gemma":[0.0033057232,0.0003633101,0.00047434034,0.00080474705,0.0006808865,0.0020658919,0.0028489043,0.0021589992,0.26215047],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022060788,0.00006448897,0.001132721,0.0004671423,0.000016261805,0.00040271718,0.0003639041,0.00012786595,0.0035391268,0.017481972,0.80206263,0.17412053],"study_design_scores_gemma":[0.0000036669383,0.000012190113,0.00046056852,0.000048014517,0.0000023366947,0.00018352002,0.00006841573,0.00003615633,0.00032035622,0.00047916378,0.9983809,0.0000046782875],"about_ca_topic_score_codex":0.004075232,"about_ca_topic_score_gemma":0.006698246,"teacher_disagreement_score":0.43876457,"about_ca_system_score_codex":0.0020506517,"about_ca_system_score_gemma":0.0025143092,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W4285384039","doi":"10.3167/hrrh.2022.070522","title":"Illness, Metaphor, and Bells","year":2022,"lang":"en","type":"article","venue":"Historical Reflections/Réflexions Historiques","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Liminality; Metaphor; Variety (cybernetics); Coronavirus disease 2019 (COVID-19); Polysemy; Aesthetics; Ringing; History; Sociology; Art; Linguistics; Philosophy; Medicine","score_opus":0.023489949501452837,"score_gpt":0.3027775526169354,"score_spread":0.27928760311548256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285384039","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24112105,0.12824126,0.009000478,0.14852004,0.0049038394,0.00008438415,0.00020412251,0.00014078444,0.46778402],"genre_scores_gemma":[0.9657818,0.01326846,0.0011836074,0.004892248,0.0007184637,0.00004200851,0.00004081569,0.000025148645,0.014047463],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99820876,0.0013286646,0.000034662316,0.00011323273,0.00014001003,0.00017471206],"domain_scores_gemma":[0.9991474,0.0004905948,0.00014138153,0.00005221293,0.000063347004,0.00010500773],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018044766,0.00056738243,0.00031920755,0.0013188537,0.0050375327,0.0040013576,0.000573746,0.0023964015,0.003448509],"category_scores_gemma":[0.0024723338,0.00018235443,0.00020166722,0.0010795076,0.044486593,0.0054840813,0.0038089536,0.0033039073,0.0003400699],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006280356,0.00002318382,0.0006134542,0.00018663674,0.0000038469607,0.0007958483,0.21488686,0.00007044789,0.0006562219,0.76620203,0.0079285335,0.00857021],"study_design_scores_gemma":[0.000030846397,0.00013556903,0.0021294795,0.00076278433,0.000008601885,0.0027920455,0.3344868,0.00021975793,0.00044081738,0.10522627,0.5537266,0.000040368803],"about_ca_topic_score_codex":0.002920656,"about_ca_topic_score_gemma":0.003010063,"teacher_disagreement_score":0.0050375327,"about_ca_system_score_codex":0.004315155,"about_ca_system_score_gemma":0.0017011216,"threshold_uncertainty_score":0.03130877},"labels":[],"label_agreement":null},{"id":"W4287113619","doi":"","title":"La revanche des coquelicots","year":2021,"lang":"fr","type":"preprint","venue":"HAL (Le Centre pour la Communication Scientifique Directe)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"World Federation of Science Journalists","funders":"","keywords":"Philosophy","score_opus":0.016676792443864875,"score_gpt":0.263993572848395,"score_spread":0.2473167804045301,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4287113619","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.032414854,0.27261952,0.013806317,0.18699722,0.046128754,0.00009794052,0.0010778822,0.0008945209,0.44596297],"genre_scores_gemma":[0.22909735,0.11276887,0.009350536,0.013964688,0.02199282,0.00022411908,0.0014373293,0.0010083326,0.61015594],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99752706,0.00091117574,0.0000787409,0.00042720753,0.00074295903,0.000312837],"domain_scores_gemma":[0.9948007,0.001890759,0.00018950763,0.00083816185,0.0016718918,0.0006089999],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0050658784,0.0010666101,0.0012420398,0.0025136983,0.0036667907,0.007578952,0.0011478175,0.004144313,0.076924495],"category_scores_gemma":[0.0076224254,0.0003642984,0.00085861015,0.0028463576,0.0035259237,0.005664714,0.002680635,0.003912853,0.01732137],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045493504,0.000073384566,0.000895877,0.00069846207,0.000041856114,0.00041662864,0.0012230552,0.0009919406,0.002957803,0.52214533,0.21048325,0.2596175],"study_design_scores_gemma":[0.000012908966,0.00002301419,0.0007959315,0.0001617,0.000003542674,0.00015739033,0.0002444453,0.00022704445,0.00031159897,0.011194736,0.9868596,0.000007969694],"about_ca_topic_score_codex":0.01327134,"about_ca_topic_score_gemma":0.0068793,"teacher_disagreement_score":0.076924495,"about_ca_system_score_codex":0.0065464126,"about_ca_system_score_gemma":0.00476549,"threshold_uncertainty_score":0.2573381},"labels":[],"label_agreement":null},{"id":"W4289844153","doi":"10.1128/iai.00242-22","title":"Chronic Leptin Deficiency Improves Tolerance of Physiological Damage and Host-Pathogen Cooperation during Yersinia pseudotuberculosis Infection","year":2022,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Government of Canada; National Institutes of Health; NOMIS Stiftung; Pioneer Fund","keywords":"Yersinia pseudotuberculosis; Biology; Pathogen; Microbiology; Host (biology); Yersinia; Yersinia Infections; Immunology; Virology; Virulence; Enterobacteriaceae; Bacteria; Escherichia coli; Genetics; Gene","score_opus":0.011144016581011622,"score_gpt":0.26008831876086164,"score_spread":0.24894430217985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4289844153","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99780947,0.0013591005,0.0003810454,0.00005923591,0.000022616512,0.000008699201,0.000108167376,0.000023035238,0.00022867043],"genre_scores_gemma":[0.9976363,0.0007260214,0.0005110306,0.000040513747,0.000012048217,0.000022162005,0.00014670247,0.00000921294,0.0008959446],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979204,0.000048451966,0.000033151497,0.00003201215,0.000029882149,0.00006443781],"domain_scores_gemma":[0.999724,0.00002866377,0.00009216987,0.00002701246,0.000021598678,0.00010667855],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022818468,0.0003571485,0.000535401,0.0002907069,0.00013171867,0.00032658334,0.00022624382,0.0003808039,0.0009439978],"category_scores_gemma":[0.00024134942,0.00014411852,0.0001618341,0.00023775265,0.00037728762,0.00032158673,0.00024346395,0.0006976594,0.00016514557],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019199332,0.00011713897,0.00053871307,0.000056165736,0.000012754475,0.00007044251,0.000017628992,0.000052319385,0.995024,0.00003542771,0.000031957257,0.0021234057],"study_design_scores_gemma":[0.00052311434,0.011252905,0.047253273,0.000063977735,0.00013976435,0.00090272515,0.00026338233,0.0011962964,0.9346023,0.00021984369,0.003549952,0.00003249186],"about_ca_topic_score_codex":0.0004568713,"about_ca_topic_score_gemma":0.0007982586,"teacher_disagreement_score":0.0009439978,"about_ca_system_score_codex":0.00019253988,"about_ca_system_score_gemma":0.0002764938,"threshold_uncertainty_score":0.0031579733},"labels":[],"label_agreement":null},{"id":"W4293222154","doi":"10.1007/s00603-022-03021-4","title":"Early Violent Failure Precursor Prediction Based on Infrared Radiation Characteristics for Coal Specimens Under Different Loading Rates","year":2022,"lang":"en","type":"article","venue":"Rock Mechanics and Rock Engineering","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Geomechanica (Canada)","funders":"National Natural Science Foundation of China","keywords":"Autocorrelation; Inflection point; Lag; Stress (linguistics); Materials science; Infrared; Coal; Deformation (meteorology); Mathematics; Statistics; Environmental science; Geology; Composite material; Engineering; Computer science; Physics; Optics; Geometry","score_opus":0.007243585489836662,"score_gpt":0.2208019830579259,"score_spread":0.21355839756808923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293222154","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9905778,0.00009646014,0.008127683,0.000017420187,0.000014068551,0.000014312794,0.00013389024,0.0001308599,0.0008874964],"genre_scores_gemma":[0.998248,0.000030903164,0.0010700192,0.0000030858062,0.0000015328806,0.000006610274,0.00008400816,0.000007696691,0.00054812524],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988186,0.0000068243544,0.0000076277606,0.000036140445,0.000048310878,0.000019313802],"domain_scores_gemma":[0.99946433,0.0001281867,0.00013212166,0.00003700402,0.00019352329,0.0000448996],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028266938,0.000366789,0.00021605816,0.00095017167,0.0002469949,0.00029445055,0.0002961482,0.0003837638,0.0017367044],"category_scores_gemma":[0.00064023,0.0002385274,0.00029693104,0.0002756355,0.00030628892,0.00039244504,0.00018583341,0.00022085154,0.0002445406],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016073313,0.0003092062,0.24143693,0.0003258172,0.000072307885,0.0007848863,0.00067733385,0.09530458,0.5765091,0.0007314783,0.0012604832,0.080980524],"study_design_scores_gemma":[0.000017303813,0.000795819,0.4383027,0.0000325472,0.00010306838,0.0002720175,0.00066522945,0.369609,0.18904532,0.00036376924,0.0007022208,0.00009086823],"about_ca_topic_score_codex":0.0013965679,"about_ca_topic_score_gemma":0.003039596,"teacher_disagreement_score":0.0017367044,"about_ca_system_score_codex":0.00017008359,"about_ca_system_score_gemma":0.00016932597,"threshold_uncertainty_score":0.0058098435},"labels":[],"label_agreement":null},{"id":"W4294294004","doi":"10.25276/2312-4911-2022-4-63-68","title":"Comparative evaluation of the clinical and economic efficiency of immediate sequential bilateral cataract surgery and delayed sequential bilateral cataract surgery","year":2022,"lang":"en","type":"article","venue":"Modern technologies in ophtalmology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Medical insurance; Cataract surgery; Phacoemulsification; Workload; Cataracts; Surgery; Optometry; Ophthalmology; Actuarial science; Business","score_opus":0.07614298427916405,"score_gpt":0.36626009569307627,"score_spread":0.2901171114139122,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4294294004","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958715,0.0016317061,0.00024063168,0.00007847456,0.000025586336,0.00006390856,0.0002727942,0.0000037412813,0.0018116146],"genre_scores_gemma":[0.9990619,0.00024613988,0.00023805785,0.000010496034,0.000016648804,0.000026256921,0.00021608276,0.000001313937,0.00018320768],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9967602,0.0014653289,0.00028582462,0.00019358903,0.0009833128,0.00031192641],"domain_scores_gemma":[0.99100155,0.00466943,0.0021599731,0.0002959992,0.0008670363,0.0010059705],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029298519,0.00032403402,0.00037811344,0.0018486785,0.0002000644,0.0006739002,0.00034161957,0.00038389242,0.00287688],"category_scores_gemma":[0.00972876,0.00011537975,0.0009858378,0.0014412838,0.0004992459,0.0004736633,0.0007327942,0.00026405073,0.00015479347],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.069714844,0.0035735515,0.6042986,0.0021316125,0.0018300824,0.001009861,0.0003313113,0.022117246,0.003819712,0.0029200378,0.001901127,0.28635195],"study_design_scores_gemma":[0.0010013417,0.029640354,0.95472294,0.00014526649,0.00052113744,0.0016503062,0.00078898977,0.0067711216,0.0019321525,0.000708342,0.0020494673,0.000068566114],"about_ca_topic_score_codex":0.0020083294,"about_ca_topic_score_gemma":0.0023917276,"teacher_disagreement_score":0.0029298519,"about_ca_system_score_codex":0.0016715117,"about_ca_system_score_gemma":0.0010685567,"threshold_uncertainty_score":0.015494704},"labels":[],"label_agreement":null},{"id":"W4295788665","doi":"10.32469/10355/91637","title":"Social inequalities and mortality during the 1918 influenza pandemic on the island of Newfoundland","year":2022,"lang":"en","type":"dissertation","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pandemic; Socioeconomic status; Geography; Inequality; Tuberculosis; Epidemiological transition; Infectious disease (medical specialty); Influenza pandemic; Public health; Social inequality; History; Disease; Demography; Medicine; Sociology; Population; Coronavirus disease 2019 (COVID-19)","score_opus":0.03533583581359535,"score_gpt":0.3529059839267414,"score_spread":0.31757014811314604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4295788665","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904813,0.0014332037,0.00004163856,0.00234256,0.000027889619,0.0000063726684,0.0007661108,0.0000041999065,0.0048968373],"genre_scores_gemma":[0.99701285,0.0014239422,0.00005361963,0.00017354313,0.000021504738,0.000008958082,0.00031437282,0.0000026322928,0.0009886276],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994444,0.00007276071,0.000021093027,0.000054878998,0.00008280991,0.0003240535],"domain_scores_gemma":[0.9988085,0.00020961023,0.00037989367,0.00005299423,0.00024004055,0.00030896303],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006150608,0.0001545631,0.00023180972,0.0007778736,0.0025703055,0.0014963306,0.0006278064,0.00032847587,0.001710133],"category_scores_gemma":[0.0019824272,0.00012342623,0.00021622592,0.0016380753,0.0015801055,0.0006976371,0.0016934808,0.0009245961,0.000110746485],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013510004,0.00006936755,0.9251042,0.00015449789,0.00015770351,0.0004531372,0.023905164,0.00078956626,0.0003541009,0.002419002,0.009582998,0.03687523],"study_design_scores_gemma":[0.0000011553676,0.0000087040025,0.99042845,0.000061255116,0.000015550322,0.00003128987,0.007558528,0.0000803272,0.000025815658,0.000059869646,0.0017213961,0.00000772157],"about_ca_topic_score_codex":0.9457706,"about_ca_topic_score_gemma":0.9776589,"teacher_disagreement_score":0.05422938,"about_ca_system_score_codex":0.015369049,"about_ca_system_score_gemma":0.0070766937,"threshold_uncertainty_score":0.11151081},"labels":[],"label_agreement":null},{"id":"W4296045700","doi":"10.1017/s1047759422000290","title":"Smallpox's antiquity in doubt","year":2022,"lang":"en","type":"article","venue":"Journal of Roman Archaeology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Smallpox; Variola virus; Plague (disease); Pandemic; History; Ancient history; Vaccinia; Disease; Virology; Biology; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty); Medicine; Pathology; Vaccination","score_opus":0.011917382466008378,"score_gpt":0.2797534196385916,"score_spread":0.26783603717258325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296045700","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15644206,0.2279159,0.004302776,0.40145126,0.028603438,0.000050090985,0.00034170554,0.00019897634,0.18069376],"genre_scores_gemma":[0.8816661,0.04491844,0.001436093,0.034982,0.0049198456,0.0000239313,0.00011244999,0.000056799687,0.031884335],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"observational","domain_scores_codex":[0.99920124,0.00032489916,0.000050967414,0.00015104229,0.00014625886,0.00012553675],"domain_scores_gemma":[0.9976935,0.0008839052,0.00033271065,0.00031171003,0.0005242731,0.00025399093],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027992828,0.00027541327,0.000520211,0.0005485982,0.002746094,0.0031832836,0.00065952505,0.0017761979,0.007194769],"category_scores_gemma":[0.0043802876,0.00013924357,0.00017144415,0.00047432314,0.0145534035,0.0030563532,0.002333691,0.0033020505,0.0010034507],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005823483,0.00009637955,0.006862634,0.0011144197,0.00005442003,0.0031529618,0.03946929,0.00017303393,0.0053137043,0.7478497,0.08928681,0.10604426],"study_design_scores_gemma":[0.000017861837,0.00010364691,0.0035497327,0.00092409016,0.00001384485,0.0018927384,0.011312649,0.00009474972,0.0010319314,0.06830703,0.9127257,0.000026004986],"about_ca_topic_score_codex":0.0018733445,"about_ca_topic_score_gemma":0.0015657158,"teacher_disagreement_score":0.007194769,"about_ca_system_score_codex":0.0015102956,"about_ca_system_score_gemma":0.0013621307,"threshold_uncertainty_score":0.024068832},"labels":[],"label_agreement":null},{"id":"W4297679395","doi":"10.1039/d2fd00131d","title":"The “<i>η</i>-sweet-spot” (<i>η</i><sub>max</sub>) in liquid-assisted mechanochemistry: polymorph control and the role of a liquid additive as either a catalyst or an inhibitor in resonant acoustic mixing (RAM)","year":2022,"lang":"en","type":"article","venue":"Faraday Discussions","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Mechanochemistry; Catalysis; Ball mill; Carbodiimide; Chemistry; Ball (mathematics); Chemical engineering; Crystallography; Analytical Chemistry (journal); Materials science; Organic chemistry; Composite material; Mathematics","score_opus":0.006290196447327782,"score_gpt":0.24728777822616016,"score_spread":0.24099758177883238,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4297679395","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8614513,0.004485206,0.07972392,0.0025207195,0.0009139634,0.00008380111,0.00040385898,0.0009959947,0.049421262],"genre_scores_gemma":[0.98023784,0.0007096133,0.011692279,0.0004730009,0.000048080572,0.000039846585,0.000128897,0.00012790904,0.0065426785],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985623,0.000020762287,0.0000062166214,0.00004465496,0.00004923419,0.000022956543],"domain_scores_gemma":[0.9998282,0.00006205256,0.000043653512,0.000022592567,0.000018873683,0.000024680448],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021878335,0.0003134939,0.00017010955,0.00014761309,0.00023683548,0.00038986,0.00036960177,0.00044403953,0.005616744],"category_scores_gemma":[0.00040008267,0.00020142434,0.00018910896,0.00016313492,0.00074079464,0.00053335546,0.00030177707,0.0006635405,0.0006500587],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015614506,0.000025179826,0.00032024193,0.00011177035,0.000009009133,0.00012581752,0.000047841917,0.00016822394,0.9782406,0.0069440114,0.0007872164,0.013063952],"study_design_scores_gemma":[0.000008771625,0.00011900838,0.00084573595,0.000011457543,0.0000078892745,0.00025375938,0.000051279458,0.0019106535,0.99059486,0.0020519872,0.0041343644,0.000010197277],"about_ca_topic_score_codex":0.00011448141,"about_ca_topic_score_gemma":0.00022248804,"teacher_disagreement_score":0.005616744,"about_ca_system_score_codex":0.00018547635,"about_ca_system_score_gemma":0.00011364479,"threshold_uncertainty_score":0.018789887},"labels":[],"label_agreement":null},{"id":"W4304996048","doi":"10.21463/shima.161","title":"Minatory Monsters for Turbulent Times: “The devil in the shape of a great fish” that presaged the English Civil War and other piscatorial prodigies","year":2022,"lang":"en","type":"article","venue":"Shima","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Dalhousie University","keywords":"Monster; Vernacular; History; Literature; Art","score_opus":0.018589964210199088,"score_gpt":0.2609227967216165,"score_spread":0.2423328325114174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4304996048","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15244268,0.20535477,0.0014021697,0.11921454,0.01775152,0.00005027932,0.0003212065,0.0003094128,0.50315356],"genre_scores_gemma":[0.6585858,0.039270554,0.00057209964,0.02750031,0.00403555,0.000024340194,0.0001787918,0.00019551751,0.26963708],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99956805,0.00012286853,0.0000137967,0.00004644186,0.0001001799,0.00014862159],"domain_scores_gemma":[0.99973124,0.000054385437,0.000047552498,0.000020384545,0.000039897914,0.00010647716],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005820101,0.00038982285,0.00019507672,0.00057364727,0.005313682,0.004633653,0.00037133603,0.00092681876,0.0063863536],"category_scores_gemma":[0.0009779875,0.0001666628,0.00014397333,0.00067047315,0.00798787,0.002239017,0.0021119518,0.0018188258,0.0015709349],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020361513,0.000052293286,0.006168743,0.00091486704,0.00002962496,0.0023199131,0.20867047,0.00007326027,0.0015264072,0.22174837,0.46282482,0.09546767],"study_design_scores_gemma":[0.0000025261916,0.000015982858,0.004326586,0.00018469786,0.0000049629866,0.00055354135,0.020554498,0.00001218936,0.00018933856,0.0011783004,0.97296745,0.000009974525],"about_ca_topic_score_codex":0.038519375,"about_ca_topic_score_gemma":0.1327048,"teacher_disagreement_score":0.038519375,"about_ca_system_score_codex":0.0032808054,"about_ca_system_score_gemma":0.002747396,"threshold_uncertainty_score":0.07659036},"labels":[],"label_agreement":null},{"id":"W4306810879","doi":"10.1038/s41586-022-05349-x","title":"Evolution of immune genes is associated with the Black Death","year":2022,"lang":"en","type":"article","venue":"Nature","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":248,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre; Canadian Institute for Advanced Research; McGill University; Montreal Neurological Institute and Hospital; Université de Montréal; University of Manitoba; Montreal Heart Institute; Centre Hospitalier Universitaire Sainte-Justine; McMaster University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Social Sciences and Humanities Research Council of Canada; National Institute of Allergy and Infectious Diseases; McMaster University; National Institutes of Health; University of Chicago; National Institute of General Medical Sciences; Canadian Institute for Advanced Research; Wenner-Gren Foundation","keywords":"Gene; Biology; Immune system; Evolutionary biology; Genetics","score_opus":0.006489269653027628,"score_gpt":0.2565005460150846,"score_spread":0.25001127636205694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4306810879","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924184,0.0008359387,0.003194142,0.00029226736,0.000034858458,0.00001088605,0.00014685745,0.000039856903,0.0030268563],"genre_scores_gemma":[0.9937442,0.00058339606,0.0019330861,0.00019994545,0.000025196856,0.000009161501,0.00023180124,0.000039437433,0.0032336626],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998698,0.000022738941,0.000005395319,0.00004780861,0.000024056788,0.000030162868],"domain_scores_gemma":[0.99979717,0.00006620915,0.000060642946,0.000018523438,0.000023178094,0.000034282682],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020411923,0.0002554415,0.00018940888,0.00050518516,0.00040714326,0.00039350038,0.00030159784,0.00059795514,0.0015940055],"category_scores_gemma":[0.00023317919,0.00018513341,0.00027533792,0.00031010158,0.00053811306,0.00034768306,0.00042671032,0.0009841125,0.00030034705],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035419123,0.000042192198,0.0066321455,0.00003515242,0.000024831275,0.00036604938,0.00011904971,0.00044732733,0.97831124,0.0023661484,0.00014856215,0.011152995],"study_design_scores_gemma":[0.00019052275,0.0009649346,0.48854437,0.00009971332,0.00019514914,0.005357301,0.0009231025,0.009146789,0.44255552,0.009332185,0.042575452,0.0001149846],"about_ca_topic_score_codex":0.0005220449,"about_ca_topic_score_gemma":0.00079820986,"teacher_disagreement_score":0.0015940055,"about_ca_system_score_codex":0.0004887317,"about_ca_system_score_gemma":0.00017478566,"threshold_uncertainty_score":0.00533247},"labels":[],"label_agreement":null},{"id":"W4309952127","doi":"10.1099/acmi.0.000525.v1","title":"Yersinia pseudotuberculosis Bacteremia with Splenic Abscesses: A Case Report","year":2022,"lang":"en","type":"preprint","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia; Providence Health Care; University of Toronto","funders":"","keywords":"Yersinia pseudotuberculosis; Bacteremia; Mesenteric lymph nodes; Yersinia enterocolitica; Medicine; Cirrhosis; Yersinia; Outbreak; Spleen; Microbiology; Antibiotics; Internal medicine; Pathology; Biology; Bacteria","score_opus":0.01592462298117718,"score_gpt":0.30088670766920866,"score_spread":0.28496208468803147,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309952127","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9270806,0.035825387,0.0079455525,0.009688411,0.0024177765,0.0005940791,0.0006730669,0.00053167396,0.015243463],"genre_scores_gemma":[0.9841298,0.0067643495,0.0024936025,0.0018515158,0.00284575,0.000081400525,0.0001781529,0.000049182057,0.001606212],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99811184,0.00022068515,0.0002714104,0.00058889965,0.00026330465,0.00054381194],"domain_scores_gemma":[0.9975746,0.000448329,0.00053576956,0.00019793704,0.00014288654,0.0011003762],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068529864,0.0044329865,0.0033042433,0.00571872,0.0053303773,0.0037155715,0.0023843946,0.010402043,0.0032507835],"category_scores_gemma":[0.003719324,0.002687796,0.0024088258,0.0048236977,0.0036452992,0.0051161703,0.004512737,0.007012151,0.0019041554],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018594521,0.00005749976,0.0018679943,0.000045829558,0.000008643265,0.9965569,0.0001730946,0.000048474496,0.0002997854,0.00010647596,0.0002662657,0.00055058737],"study_design_scores_gemma":[0.000009122385,0.000047461883,0.0012944533,0.000022178425,0.000010761935,0.9978033,0.00014378439,0.00011559043,0.00010091596,0.00010141814,0.00033751992,0.000013420526],"about_ca_topic_score_codex":0.0025359374,"about_ca_topic_score_gemma":0.0034153506,"teacher_disagreement_score":0.010402043,"about_ca_system_score_codex":0.0022339225,"about_ca_system_score_gemma":0.001445914,"threshold_uncertainty_score":0.016208291},"labels":[],"label_agreement":null},{"id":"W4310259633","doi":"","title":"Infection of the Jackal (Canis aureus) by Haplor-chis taichui (Trematoda: Heterophyidae) in Southwestern Iran: A Clue for Potential Human Infection","year":2019,"lang":"en","type":"article","venue":"DOAJ (DOAJ: Directory of Open Access Journals)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Jackal; Biology; Canis; Zoology; Trematoda; Helminths; Veterinary medicine; Ecology; Medicine","score_opus":0.10419944195887328,"score_gpt":0.4974233899694569,"score_spread":0.39322394801058363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310259633","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9997353,0.000053848045,0.000033822806,0.000021648559,0.0000014618665,0.0000026584069,0.000018706325,0.0000012972163,0.00013122597],"genre_scores_gemma":[0.99978346,0.00005121014,0.00008110162,0.000010342083,0.0000025064912,0.0000012588944,0.00002675343,2.0089341e-7,0.000043109154],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9999174,0.000015949712,0.000005622322,0.000013750206,0.000016630072,0.000030618907],"domain_scores_gemma":[0.9998721,0.000016253414,0.000051348485,0.000004862186,0.000021753185,0.000033573568],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015007876,0.0002017707,0.00014099127,0.00062504964,0.00050083426,0.00019469224,0.00013448989,0.00025570174,0.00048289137],"category_scores_gemma":[0.00019386662,0.000120241806,0.00008759567,0.0003423925,0.0003861094,0.00019725252,0.00015653827,0.0001558646,0.00006338175],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005074871,0.000031883457,0.9893105,0.000021941094,0.000009969787,0.0014960994,0.000606924,0.000033383127,0.005951124,0.000017271139,0.000077188626,0.0023929123],"study_design_scores_gemma":[0.0000019111078,0.00009478425,0.9950098,0.000009878469,0.000010402596,0.0021010744,0.0021359767,0.00012771413,0.00030379798,0.000020221092,0.00018118336,0.0000032969726],"about_ca_topic_score_codex":0.016933968,"about_ca_topic_score_gemma":0.030631434,"teacher_disagreement_score":0.016933968,"about_ca_system_score_codex":0.00025414742,"about_ca_system_score_gemma":0.00035689273,"threshold_uncertainty_score":0.033670843},"labels":[],"label_agreement":null},{"id":"W4310859840","doi":"10.1007/s40656-022-00552-5","title":"Sterelny, Kim. The Pleistocene Social Contract. New York: Oxford University Press. 2021. xi + 200 pp.","year":2022,"lang":"en","type":"article","venue":"History & Philosophy of the Life Sciences","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Philosophy of science; History of science; History; Environmental ethics; Philosophy; Epistemology","score_opus":0.05312929718872605,"score_gpt":0.2500304212152612,"score_spread":0.19690112402653515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310859840","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00039862297,0.95644575,0.0009995751,0.008232744,0.004336438,0.000014171123,0.0017351585,0.00015679895,0.027680773],"genre_scores_gemma":[0.008298569,0.91191477,0.0017061302,0.0016858464,0.0025018423,0.000068780464,0.0013158756,0.00039236166,0.07211584],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994856,0.000092403,0.000098415876,0.00011355763,0.00016589041,0.000044111457],"domain_scores_gemma":[0.9988105,0.0005169763,0.00019363902,0.00009536497,0.00028183826,0.00010166672],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007508769,0.0041701295,0.00217115,0.004747459,0.0019446005,0.0028604716,0.0017515653,0.0029224171,0.07893686],"category_scores_gemma":[0.0020455546,0.0021813386,0.0010737425,0.009553253,0.0033880589,0.007782358,0.0025046933,0.0042676893,0.04493975],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011333136,0.000029208064,0.00049630203,0.001987232,0.00006663774,0.0004024855,0.0016690557,0.00044351144,0.0003437167,0.024703268,0.72691983,0.24282551],"study_design_scores_gemma":[0.000022873803,0.00002341557,0.0027444558,0.003490354,0.000033893706,0.0006130505,0.00077965634,0.000088198096,0.00014273336,0.020925619,0.9711041,0.000031727344],"about_ca_topic_score_codex":0.017533328,"about_ca_topic_score_gemma":0.041460652,"teacher_disagreement_score":0.07893686,"about_ca_system_score_codex":0.0022679078,"about_ca_system_score_gemma":0.002305416,"threshold_uncertainty_score":0.2640701},"labels":[],"label_agreement":null},{"id":"W4311694832","doi":"10.1017/9781800107861.009","title":"Bubo Men? Repurposing Medieval Anatomic Illustrations for Plague Therapy in the Fifteenth and Sixteenth Centuries","year":2022,"lang":"en","type":"other","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Plague (disease); Fifteenth; Bubo; Repurposing; Ancient history; History; Geography; Archaeology; Eagle; Biology; Ecology","score_opus":0.01703879018475768,"score_gpt":0.2978770503562139,"score_spread":0.28083826017145624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4311694832","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15178901,0.13533841,0.008595398,0.039356966,0.011027667,0.000112901755,0.0003076824,0.00034750064,0.65312445],"genre_scores_gemma":[0.8085047,0.03395433,0.0053686607,0.0032397117,0.0013283812,0.00007488027,0.00016448551,0.00024790262,0.14711697],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9992349,0.00043703464,0.000037130478,0.00006358243,0.00013701571,0.00009032595],"domain_scores_gemma":[0.999335,0.00034893522,0.00008877645,0.00005891118,0.00007580601,0.000092674374],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023301789,0.0006864664,0.00028342335,0.0026507743,0.0045888643,0.0051492043,0.0005415386,0.0011732471,0.007803733],"category_scores_gemma":[0.0030788044,0.000301075,0.00023727349,0.00080739165,0.012460586,0.002827282,0.0036376454,0.0023840591,0.0010620184],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012708364,0.000036927693,0.0012014661,0.00070673466,0.000014105141,0.001151478,0.2575824,0.0003081735,0.0014333149,0.65488225,0.03065935,0.05189675],"study_design_scores_gemma":[0.0000097157845,0.00003345113,0.0013509379,0.00078112684,0.000010846951,0.0008809532,0.021425117,0.00015280899,0.0006978291,0.011610737,0.9630277,0.000018708457],"about_ca_topic_score_codex":0.003954934,"about_ca_topic_score_gemma":0.01395535,"teacher_disagreement_score":0.007803733,"about_ca_system_score_codex":0.0037557404,"about_ca_system_score_gemma":0.0014581166,"threshold_uncertainty_score":0.027249873},"labels":[],"label_agreement":null},{"id":"W4313117237","doi":"10.4000/books.pressesmines.7426","title":"(Se) vacciner avec modération au Québec","year":2022,"lang":"fr","type":"book-chapter","venue":"Presses des Mines eBooks","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Musée de la Civilisation","funders":"","keywords":"Mod; Physics; Computer science; Mathematics; Combinatorics","score_opus":0.035048465889871185,"score_gpt":0.28079182067895136,"score_spread":0.2457433547890802,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313117237","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.021128144,0.053995267,0.0020490596,0.024706746,0.0051212693,0.00023947288,0.001838593,0.00034772523,0.89057374],"genre_scores_gemma":[0.041900173,0.013205051,0.0011889478,0.0028277363,0.00018393571,0.00005348568,0.00036502932,0.000051164567,0.9402245],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997874,0.000026728108,0.000006943215,0.000038524246,0.00008401719,0.00005640723],"domain_scores_gemma":[0.99971503,0.000027694652,0.000013655603,0.000013576497,0.00019436968,0.000035631925],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039683236,0.00037901456,0.00017051715,0.00073941867,0.0019347204,0.001483762,0.0004054725,0.00084803876,0.040559486],"category_scores_gemma":[0.0005673454,0.00015398732,0.00023580485,0.0011296092,0.00077257975,0.00075174787,0.00042921418,0.0009686572,0.004719545],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014745133,0.000083317704,0.0033136536,0.0004183495,0.000017060089,0.0004214216,0.002336176,0.0012512446,0.005053788,0.09727692,0.58680856,0.30287203],"study_design_scores_gemma":[0.000008931943,0.000040611045,0.002622299,0.00009394916,0.0000050818717,0.000052240986,0.00019090925,0.00019511957,0.00036246874,0.00060716236,0.9958134,0.000007903141],"about_ca_topic_score_codex":0.93885905,"about_ca_topic_score_gemma":0.96015126,"teacher_disagreement_score":0.061140954,"about_ca_system_score_codex":0.016431922,"about_ca_system_score_gemma":0.0144338785,"threshold_uncertainty_score":0.13568503},"labels":[],"label_agreement":null},{"id":"W4317499925","doi":"10.1038/s42003-022-04394-6","title":"Plagued by a cryptic clock: insight and issues from the global phylogeny of Yersinia pestis","year":2023,"lang":"en","type":"article","venue":"Communications Biology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre; Canadian Institute for Advanced Research; McMaster University","funders":"Compute Canada; McMaster University; Social Sciences and Humanities Research Council of Canada; Government of Canada; Canadian Institute for Advanced Research","keywords":"Yersinia pestis; Plague (disease); Pandemic; Evolutionary biology; Biology; Phylogenetic tree; Phylogenetics; Molecular clock; Infectious disease (medical specialty); Population; Divergence (linguistics); Zoology; Genealogy; Geography; Demography; Disease; Coronavirus disease 2019 (COVID-19); Genetics; History; Virulence; Gene; Medicine","score_opus":0.02728569997487008,"score_gpt":0.34678363611811486,"score_spread":0.3194979361432448,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4317499925","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9583347,0.0035823223,0.03442466,0.0017084208,0.0000362716,0.00000946102,0.00033553154,0.000071415554,0.0014972371],"genre_scores_gemma":[0.9936255,0.0012982171,0.004466219,0.00019175145,0.00003058199,0.000007170892,0.00021699295,0.000050653143,0.00011285653],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994671,0.00022884092,0.00003906689,0.00016413162,0.000046516507,0.00005446417],"domain_scores_gemma":[0.997341,0.0014301862,0.00049382803,0.00038390217,0.00021338438,0.00013768907],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0032836897,0.00041078846,0.00072797376,0.00070541765,0.0005718817,0.0017642103,0.00050706277,0.00047952804,0.00082976866],"category_scores_gemma":[0.0073937727,0.00024498565,0.00038765918,0.0012489733,0.0012733696,0.002078634,0.0009654334,0.0012535421,0.00014250631],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00075074646,0.000077406636,0.6464503,0.0007224652,0.0009916632,0.0010162308,0.0055141468,0.061979856,0.08766586,0.028423343,0.0016588453,0.1647491],"study_design_scores_gemma":[0.000037264046,0.0002480211,0.7970807,0.00035650842,0.00063223066,0.0008359982,0.004854115,0.12285907,0.005984245,0.0507268,0.016247973,0.00013709102],"about_ca_topic_score_codex":0.0026911537,"about_ca_topic_score_gemma":0.0039904774,"teacher_disagreement_score":0.0032836897,"about_ca_system_score_codex":0.0004724692,"about_ca_system_score_gemma":0.00049873214,"threshold_uncertainty_score":0.017366052},"labels":[],"label_agreement":null},{"id":"W4318824890","doi":"10.3138/jammi-2022-0019","title":"Brief report of complicated<i>Yersinia enterocolitica</i>infection in an immunocompetent host: Review of the literature and pathogenicity mechanisms","year":2023,"lang":"en","type":"article","venue":"Journal of the Association of Medical Microbiology and Infectious Disease Canada","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Association of Medical Microbiology and Infectious Disease Canada","keywords":"Yersinia enterocolitica; Medicine; Immunosuppression; Internal medicine; Biology","score_opus":0.004367428104523258,"score_gpt":0.2472352401759778,"score_spread":0.24286781207145455,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318824890","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05262753,0.9281555,0.0021152436,0.004160638,0.0038285225,0.00006596871,0.00022608669,0.00013673284,0.008683882],"genre_scores_gemma":[0.22315988,0.754473,0.0015959927,0.004012237,0.013355915,0.000035998535,0.00042128837,0.000041619718,0.0029040358],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99970824,0.000045869332,0.000090799724,0.000056274086,0.0000482414,0.0000505634],"domain_scores_gemma":[0.9991448,0.0002733001,0.00032843903,0.000035444395,0.000102882,0.00011509585],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000332262,0.0009178652,0.0011761128,0.0023633847,0.0005975526,0.0014970603,0.0007319797,0.0019590326,0.0015676476],"category_scores_gemma":[0.0009751432,0.00037993107,0.00049188826,0.0019897446,0.00081177114,0.0018014611,0.00059666764,0.0010747489,0.0009801161],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019037665,0.00012414964,0.015025532,0.0075945603,0.00019223795,0.8564305,0.00069072767,0.0002620684,0.004092412,0.0008606852,0.03020125,0.08433563],"study_design_scores_gemma":[0.0000104356395,0.00011975189,0.005642191,0.00087503006,0.00014055907,0.93939865,0.00034234722,0.000120914825,0.00066401926,0.0003056951,0.052351013,0.00002933868],"about_ca_topic_score_codex":0.0007989758,"about_ca_topic_score_gemma":0.0009338421,"teacher_disagreement_score":0.0023633847,"about_ca_system_score_codex":0.00044782975,"about_ca_system_score_gemma":0.00061017496,"threshold_uncertainty_score":0.0052443743},"labels":[],"label_agreement":null},{"id":"W4318829650","doi":"10.7202/1095570ar","title":"Between Expiatory Religious Processions and Individual Escapes: Responses to Bubonic Plague Epidemics in the Historiae of Gregory of Tours and Paul the Deacon","year":2023,"lang":"en","type":"article","venue":"Journal of the Canadian Historical Association","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Plague (disease); Bishops; History; Politics; Outbreak; Ancient history; Heresy; Narrative; Classics; Literature; Art; Theology; Philosophy; Virology; Law; Political science; Medicine","score_opus":0.026295486488526545,"score_gpt":0.2769145930447712,"score_spread":0.25061910655624464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318829650","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9307775,0.006636891,0.00060746656,0.014565737,0.0005271274,0.00002634241,0.00004002616,0.000016851813,0.046802055],"genre_scores_gemma":[0.99261624,0.0014625193,0.00011541923,0.0009590722,0.00011368922,0.0000089864025,0.000010446243,0.000018947589,0.004694594],"study_design_codex":"qualitative","study_design_gemma":"observational","domain_scores_codex":[0.99819297,0.0011074151,0.000028822042,0.0001488103,0.00021744455,0.00030458017],"domain_scores_gemma":[0.9975702,0.0013640049,0.00039117542,0.00009906114,0.00020332579,0.00037224693],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024072118,0.0004066533,0.00036896617,0.0010943416,0.011306412,0.0044610617,0.0007178437,0.0023045288,0.0016012006],"category_scores_gemma":[0.00397871,0.00026888092,0.00015490125,0.0008617489,0.026236808,0.0020654022,0.004626746,0.0037986648,0.00013915943],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030241792,0.0000080064165,0.001733239,0.00003162676,0.0000044581634,0.0006322138,0.98643106,0.00002020504,0.00035796245,0.0073469863,0.0014062767,0.0019978217],"study_design_scores_gemma":[0.000007818803,0.000035819237,0.008764345,0.00013028954,0.000007735594,0.0007740421,0.8788426,0.000049638737,0.0003335011,0.0017552235,0.10927037,0.000028576931],"about_ca_topic_score_codex":0.032831118,"about_ca_topic_score_gemma":0.07426962,"teacher_disagreement_score":0.032831118,"about_ca_system_score_codex":0.0076393858,"about_ca_system_score_gemma":0.0024540937,"threshold_uncertainty_score":0.06528008},"labels":[],"label_agreement":null},{"id":"W4318972988","doi":"10.7202/1095216ar","title":"Les épidémies, la mort et les morts. Effets des réponses aux crises épidémiques sur les pratiques funéraires et les expériences des familles, des proches ou des soignants","year":2022,"lang":"fr","type":"article","venue":"Frontières","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Agence Nationale de la Recherche","keywords":"Humanities; Art","score_opus":0.04831795720512868,"score_gpt":0.3470287696859898,"score_spread":0.2987108124808611,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318972988","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9413424,0.022166567,0.00021424123,0.010807095,0.00041361505,0.00012103475,0.00052877585,0.000019119056,0.024387142],"genre_scores_gemma":[0.98272264,0.010267617,0.00018474241,0.00063360325,0.00013385242,0.00007607997,0.00009753185,0.0000043127025,0.0058795037],"study_design_codex":"design_other","study_design_gemma":"qualitative","domain_scores_codex":[0.99789256,0.0013672945,0.00008239222,0.00007432061,0.00032847002,0.0002549615],"domain_scores_gemma":[0.98900783,0.005544678,0.0020486033,0.00022918009,0.0013283084,0.00184131],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029549457,0.00025533096,0.00032036882,0.00040286852,0.0011155487,0.0009388299,0.00024438166,0.0008240085,0.007028522],"category_scores_gemma":[0.018437192,0.00015906,0.0003515453,0.00036999804,0.0011602775,0.0009036628,0.001343126,0.0013952531,0.00050735264],"study_design_candidate":"qualitative","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0069878385,0.002639149,0.3652643,0.003660315,0.00058052066,0.003968673,0.16181643,0.00062289025,0.008092186,0.0057043578,0.020530956,0.42013237],"study_design_scores_gemma":[0.00011138376,0.0046652323,0.83756775,0.0009118685,0.00015140348,0.0017087182,0.108849905,0.00009909766,0.0013114061,0.0019336113,0.042612284,0.0000773581],"about_ca_topic_score_codex":0.003597029,"about_ca_topic_score_gemma":0.0052790823,"teacher_disagreement_score":0.007028522,"about_ca_system_score_codex":0.0004994379,"about_ca_system_score_gemma":0.0008765733,"threshold_uncertainty_score":0.023512721},"labels":[],"label_agreement":null},{"id":"W4319063697","doi":"","title":"Bilateral cataract development in Holstein heifer calves.","year":2023,"lang":"en","type":"article","venue":"PubMed","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Gynecology; Medicine; Biology","score_opus":0.02948004972746212,"score_gpt":0.2633267987568738,"score_spread":0.2338467490294117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319063697","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99804926,0.0005635905,0.00010247343,0.00003748782,0.000014472882,0.0000092777445,0.00041042687,0.000008828603,0.00080415944],"genre_scores_gemma":[0.9967163,0.00049027486,0.0000739759,0.000035257966,0.0000075169773,0.000011308408,0.00048409094,0.0000046349724,0.0021766815],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997228,0.000039078448,0.000014788778,0.000054810378,0.00006393875,0.00010450538],"domain_scores_gemma":[0.9993678,0.00011861447,0.00018313606,0.00002314994,0.00009265382,0.00021464382],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002719015,0.00037096982,0.00024295565,0.0013731727,0.00044485953,0.0003837327,0.00022691482,0.0003993726,0.0025537324],"category_scores_gemma":[0.00057052396,0.00032014534,0.00021584259,0.00038441847,0.0004278072,0.00028183247,0.00023707721,0.00048758747,0.00026106383],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012763756,0.0015089661,0.37163335,0.00023544171,0.00015553023,0.013395212,0.00050206226,0.00021140736,0.58105165,0.00035703767,0.0008291442,0.017356502],"study_design_scores_gemma":[0.000050907525,0.0014316521,0.9795172,0.00001997139,0.000053782755,0.0040478404,0.00048595507,0.00018380524,0.013572687,0.00006852401,0.000553191,0.000014373019],"about_ca_topic_score_codex":0.015482912,"about_ca_topic_score_gemma":0.017231638,"teacher_disagreement_score":0.015482912,"about_ca_system_score_codex":0.00083774107,"about_ca_system_score_gemma":0.0007436029,"threshold_uncertainty_score":0.03078556},"labels":[],"label_agreement":null},{"id":"W4321782648","doi":"10.1016/j.cub.2023.01.064","title":"Emergence, continuity, and evolution of Yersinia pestis throughout medieval and early modern Denmark","year":2023,"lang":"en","type":"article","venue":"Current Biology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institute for Advanced Research; Memorial University of Newfoundland; University of Manitoba; McMaster University","funders":"Australian Research Council; Social Sciences and Humanities Research Council of Canada; Compute Canada; McMaster University","keywords":"Yersinia pestis; Biology; Evolutionary biology; Zoology; Virulence; Genetics","score_opus":0.023826525127703026,"score_gpt":0.3388248627227422,"score_spread":0.3149983375950392,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4321782648","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99592674,0.0021452743,0.00014188502,0.000042855798,0.0000043998484,0.0000030262104,0.00008234331,0.0000030019185,0.0016504934],"genre_scores_gemma":[0.9986364,0.0007682392,0.00008610325,0.0000073246347,0.0000016233257,0.0000015272453,0.000053995314,0.0000016460377,0.00044312712],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99953365,0.0000670423,0.000042690015,0.00013960482,0.00006115633,0.00015590999],"domain_scores_gemma":[0.9996264,0.00007243288,0.00012957038,0.000022850541,0.00009614998,0.000052637326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071577897,0.00021044498,0.00027899328,0.0021321967,0.0011551968,0.0013429059,0.00037239495,0.00033628708,0.00084900693],"category_scores_gemma":[0.0009999317,0.00030738005,0.00028240698,0.0010786914,0.0011417136,0.0005527762,0.0012023957,0.00029402217,0.00010206873],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017800584,0.00008463312,0.84094405,0.00035372356,0.00037928266,0.0019303417,0.04386241,0.0012757125,0.040103536,0.011119616,0.00027105026,0.057895422],"study_design_scores_gemma":[0.000004664768,0.00006143455,0.9865719,0.00006653417,0.000040994226,0.0005493799,0.0050520133,0.00018711881,0.0010092807,0.00029177792,0.0061456934,0.000019113932],"about_ca_topic_score_codex":0.054754686,"about_ca_topic_score_gemma":0.07130943,"teacher_disagreement_score":0.054754686,"about_ca_system_score_codex":0.0021500702,"about_ca_system_score_gemma":0.0011402076,"threshold_uncertainty_score":0.10887194},"labels":[],"label_agreement":null},{"id":"W4323663864","doi":"10.1101/2023.03.03.531048","title":"Medieval social landscape through the genetic history of Cambridgeshire before and after the Black Death","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Arthur B. McDonald-Canadian Astroparticle Physics Research Institute","funders":"European Regional Development Fund; Tartu Ülikool; Sapienza Università di Roma; KU Leuven; Eesti Teadusagentuur; Wellcome Trust","keywords":"Pandemic; Genetic diversity; Demography; Context (archaeology); Geography; Demographic history; Genealogy; History; Population; Coronavirus disease 2019 (COVID-19); Archaeology; Medicine; Sociology","score_opus":0.01860533777408309,"score_gpt":0.24638299877262834,"score_spread":0.22777766099854524,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4323663864","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99844724,0.00035843026,0.00003717963,0.00011195735,0.00000509608,0.0000016381955,0.00024500513,0.0000015422554,0.00079181336],"genre_scores_gemma":[0.99914193,0.00012950896,0.00002740012,0.000022312457,0.0000062120794,0.0000013270591,0.0001705083,0.0000025314098,0.0004982615],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99977297,0.00004248369,0.000008370243,0.00007455246,0.000031021,0.000070712864],"domain_scores_gemma":[0.9993174,0.00008933558,0.00019117839,0.000049151324,0.00018609744,0.0001668655],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027094994,0.00018990002,0.00026003938,0.0016024451,0.0010813412,0.0010448223,0.00033149158,0.00034277723,0.005123325],"category_scores_gemma":[0.001077422,0.00010192401,0.000097404496,0.0014758938,0.0012106425,0.00033516987,0.0010487719,0.00033663365,0.00030773602],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006098403,0.000041306834,0.917417,0.00010865044,0.00017129995,0.0010411077,0.048584376,0.00017099374,0.013057465,0.001527717,0.0012945636,0.015975693],"study_design_scores_gemma":[0.0000012310599,0.000015693724,0.99587196,0.000013344493,0.000006037638,0.00006418375,0.0030797755,0.000020823665,0.000105469284,0.000031867577,0.00078489387,0.0000047008484],"about_ca_topic_score_codex":0.1888,"about_ca_topic_score_gemma":0.27134317,"teacher_disagreement_score":0.1888,"about_ca_system_score_codex":0.0016359464,"about_ca_system_score_gemma":0.00042815538,"threshold_uncertainty_score":0.37540215},"labels":[],"label_agreement":null},{"id":"W4327756750","doi":"10.1016/j.jasrep.2023.103947","title":"Stowaways: Maritime ecology of the oldest commensal ship rats (Rattus rattus) found on a Mediterranean shipwreck","year":2023,"lang":"en","type":"article","venue":"Journal of Archaeological Science Reports","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Horizon 2020; Social Sciences and Humanities Research Council of Canada; Muséum National d'Histoire Naturelle; Horizon 2020 Framework Programme; HORIZON EUROPE European Research Council; University of Haifa; Israel Science Foundation; Honor Frost Foundation","keywords":"Biological dispersal; Ecology; Habitat; Metapopulation; Geography; Population; Biology; Mediterranean climate; Predation; Fishery","score_opus":0.04211203655954654,"score_gpt":0.3257486073757845,"score_spread":0.28363657081623794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4327756750","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996431,0.000040962554,0.00001872359,0.0000045614324,0.0000016907393,0.0000015219971,0.000049622864,0.0000018957878,0.00023784745],"genre_scores_gemma":[0.9990212,0.00008583016,0.00012915178,0.000009422918,0.0000033287106,0.0000024318765,0.00011252322,0.0000022641955,0.0006339511],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99995065,0.0000048572197,0.0000028966026,0.000015080287,0.0000057709194,0.000020889278],"domain_scores_gemma":[0.99983823,0.000008948248,0.000047865222,0.000006942482,0.00002901152,0.00006895525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000077824334,0.00030113096,0.00018675691,0.0010402948,0.0005672397,0.00047794543,0.00030873044,0.0002894499,0.0015693889],"category_scores_gemma":[0.00013573818,0.0001966064,0.00015310301,0.00055916706,0.00048585303,0.00025374623,0.0003773461,0.00020182901,0.00041218725],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064523635,0.00011080196,0.8942315,0.000039730952,0.00004754048,0.00084379216,0.0024492044,0.00007141955,0.09131242,0.00006618988,0.00018249487,0.009999632],"study_design_scores_gemma":[0.0000014147791,0.00012320522,0.9976618,0.0000034279103,0.000009560281,0.00020366334,0.0011028463,0.00003959162,0.00061081845,0.000006559165,0.00023419764,0.0000029417886],"about_ca_topic_score_codex":0.015721872,"about_ca_topic_score_gemma":0.055336606,"teacher_disagreement_score":0.015721872,"about_ca_system_score_codex":0.00021691891,"about_ca_system_score_gemma":0.0002341519,"threshold_uncertainty_score":0.03126067},"labels":[],"label_agreement":null},{"id":"W4360600694","doi":"10.1128/spectrum.00364-23","title":"Lysis Cassette-Mediated Exoprotein Release in Yersinia entomophaga Is Controlled by a PhoB-Like Regulator","year":2023,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Environment","funders":"Ministry for Business Innovation and Employment; Ministry of Business, Innovation and Employment; Bio-Protection Research Centre; Callaghan Innovation","keywords":"Regulator; Microbiology; Lysis; Biology; Chemistry; Biochemistry","score_opus":0.005994588447724465,"score_gpt":0.24533977033248486,"score_spread":0.2393451818847604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4360600694","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99690115,0.00027530908,0.0020780005,0.00004993304,0.0000050616663,0.000007459863,0.000104235274,0.000046215366,0.0005326087],"genre_scores_gemma":[0.99758613,0.00011307925,0.0009695255,0.000020808642,0.0000029031307,0.000009931004,0.00017330957,0.000011890514,0.0011125542],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999262,0.000016568132,0.000006555695,0.000015506865,0.000018027624,0.000017101855],"domain_scores_gemma":[0.999889,0.000047316746,0.00002705575,0.000013313262,0.00000774988,0.000015522859],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001190531,0.00018567631,0.00015522372,0.00009301244,0.00009003373,0.00024268664,0.00008632355,0.00016434302,0.00072163634],"category_scores_gemma":[0.00013099819,0.00007447231,0.00013938943,0.00006217073,0.00016466017,0.00014530812,0.00022970658,0.0003054788,0.00029518807],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005122209,0.000009475884,0.00026950592,0.000010992228,0.0000011666751,0.000043144766,0.000011305578,0.0000417868,0.9991093,0.000064317275,0.000007403236,0.00038024355],"study_design_scores_gemma":[0.000010739832,0.00017877901,0.01207654,0.0000050780886,0.000006121415,0.00031847015,0.000074996315,0.001706516,0.9846074,0.000077620854,0.00093137875,0.00000628031],"about_ca_topic_score_codex":0.00022318303,"about_ca_topic_score_gemma":0.00027749286,"teacher_disagreement_score":0.00072163634,"about_ca_system_score_codex":0.00015940513,"about_ca_system_score_gemma":0.0000914892,"threshold_uncertainty_score":0.0024141073},"labels":[],"label_agreement":null},{"id":"W4362467536","doi":"10.1086/724372","title":":<i>The Complete History of the Black Death</i>","year":2023,"lang":"en","type":"article","venue":"Speculum","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Carleton University","funders":"","keywords":"White (mutation); Download; Permission; History; Art history; Genealogy; Library science; Art; Computer science; Political science; Law; World Wide Web","score_opus":0.02690171065073873,"score_gpt":0.26365635695260264,"score_spread":0.2367546463018639,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362467536","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0032866087,0.20629321,0.0034077542,0.4855448,0.18403251,0.000056215875,0.00061189034,0.00026873706,0.11649826],"genre_scores_gemma":[0.053544044,0.116907075,0.004000022,0.35354722,0.12773377,0.00013382586,0.0005172248,0.00030234348,0.3433144],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993261,0.00025063893,0.000040093088,0.00011202982,0.00017537027,0.00009575822],"domain_scores_gemma":[0.9986759,0.00043066,0.0001557092,0.00010192249,0.0004006488,0.00023513428],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013095601,0.0007387449,0.0003366868,0.0010269871,0.0019509568,0.0031669391,0.0007460489,0.004445895,0.014761657],"category_scores_gemma":[0.0038463823,0.00017549607,0.00026868487,0.00075467135,0.0040378324,0.004348458,0.0020471711,0.0051398305,0.0067649884],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000084469175,0.000022190057,0.00066887663,0.00042203508,0.000014443326,0.00037680907,0.0009858345,0.00004179506,0.0006431432,0.0559673,0.8661767,0.0745964],"study_design_scores_gemma":[0.0000018013486,0.000008540817,0.0003227102,0.00011432065,0.0000023256957,0.0002725057,0.00018676034,0.000008015028,0.00013915045,0.0033515086,0.9955843,0.000008104665],"about_ca_topic_score_codex":0.0037112017,"about_ca_topic_score_gemma":0.006128148,"teacher_disagreement_score":0.014761657,"about_ca_system_score_codex":0.0013086904,"about_ca_system_score_gemma":0.0011506622,"threshold_uncertainty_score":0.049382687},"labels":[],"label_agreement":null},{"id":"W4362644561","doi":"10.1017/9781802701128","title":"New Evidence for the Dating and Impact of the Black Death in Asia","year":2022,"lang":"en","type":"book","venue":"Amsterdam University Press eBooks","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Globe; Pandemic; Plague (disease); Scholarship; Quarter (Canadian coin); Pace; History; Ancient history; China; Geography; Coronavirus disease 2019 (COVID-19); Demography; Political science; Archaeology; Sociology; Psychology; Medicine","score_opus":0.05280816641587158,"score_gpt":0.31138380825897305,"score_spread":0.25857564184310144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362644561","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.031218186,0.07098648,0.00243607,0.021902828,0.004437221,0.000013941698,0.00023084052,0.00008313699,0.8686913],"genre_scores_gemma":[0.3561066,0.10868376,0.002938827,0.007493526,0.0070273285,0.00004149209,0.0003798742,0.0003291683,0.51699936],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99978584,0.000065078384,0.000008165862,0.00003738314,0.00007826756,0.00002513728],"domain_scores_gemma":[0.9986406,0.00082163117,0.00013652007,0.00012538186,0.00020662829,0.00006919802],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00097145117,0.00029138228,0.00018759805,0.0016248781,0.001442291,0.0033481887,0.0004931897,0.0008892108,0.013906864],"category_scores_gemma":[0.002163036,0.00017248503,0.00014963723,0.0016127217,0.004743684,0.003922641,0.0016607383,0.0020698337,0.0022783123],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016284987,0.000040465045,0.008320323,0.00078809727,0.000028605298,0.0015399955,0.06105753,0.0003385736,0.0027652248,0.52869475,0.1154887,0.2807748],"study_design_scores_gemma":[0.0000056779636,0.00002393877,0.010819877,0.000807357,0.000018052328,0.000718405,0.008065186,0.00009959603,0.0009755517,0.049316797,0.92913264,0.000016923017],"about_ca_topic_score_codex":0.0026605825,"about_ca_topic_score_gemma":0.008206002,"teacher_disagreement_score":0.013906864,"about_ca_system_score_codex":0.0012491619,"about_ca_system_score_gemma":0.0010970221,"threshold_uncertainty_score":0.046523094},"labels":[],"label_agreement":null},{"id":"W4362669671","doi":"10.56786/phwr.2023.16.13.2","title":"2022년 국립인천공항검역소 의뢰 해외입국자 코로나바이러스감염증-19 검사 현황","year":2023,"lang":"ko","type":"article","venue":"Public Health Weekly Report","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine","score_opus":0.07180288681346261,"score_gpt":0.3809686152743442,"score_spread":0.30916572846088164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362669671","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.989302,0.00054061174,0.00069184345,0.00013495394,0.000049861344,0.000054971588,0.0066502695,0.000037552916,0.0025379693],"genre_scores_gemma":[0.9877893,0.00028374046,0.00092311786,0.00012417804,0.000037492886,0.00004555395,0.00857404,0.000012693088,0.002209913],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986155,0.00015612533,0.00022563584,0.00027667795,0.00032798058,0.0003981329],"domain_scores_gemma":[0.9980117,0.0002610182,0.0008620234,0.00009628422,0.0005841437,0.00018469254],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012201129,0.0004292101,0.00024540178,0.0023575649,0.00033891608,0.0011178299,0.00032084258,0.0002775479,0.0030542589],"category_scores_gemma":[0.0020017703,0.00025814865,0.00085534627,0.00198661,0.00025943934,0.0005706593,0.0004166305,0.00039892376,0.0012414067],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000071711685,0.000024572057,0.9910779,0.000034817345,0.00004561334,0.00020347544,0.00010647252,0.00022698869,0.00035438672,0.000050746366,0.00076582,0.007037538],"study_design_scores_gemma":[0.0000048298734,0.0001501428,0.9912373,0.000029601719,0.00006519124,0.00066753157,0.0007854597,0.0013329352,0.0008306442,0.000058079415,0.0048216777,0.00001664873],"about_ca_topic_score_codex":0.021306902,"about_ca_topic_score_gemma":0.023055887,"teacher_disagreement_score":0.021306902,"about_ca_system_score_codex":0.00075284584,"about_ca_system_score_gemma":0.0008638086,"threshold_uncertainty_score":0.04236579},"labels":[],"label_agreement":null},{"id":"W4367173718","doi":"10.1126/science.abn5887","title":"Comparative genomics of Balto, a famous historic dog, captures lost diversity of 1920s sled dogs","year":2023,"lang":"en","type":"article","venue":"Science","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Museum of Nature; Genome British Columbia","funders":"National Cancer Institute; National Institute on Aging; National Institutes of Health; National Human Genome Research Institute; Howard Hughes Medical Institute","keywords":"Breed; Biology; Compendium; Population; Genome; Population genomics; Genomics; Coat; Genetics; Evolutionary biology; Geography; Gene; Demography; Ecology; Archaeology","score_opus":0.031222998369461016,"score_gpt":0.31279240383196016,"score_spread":0.28156940546249914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4367173718","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99931073,0.000064362706,0.00014295077,0.000010626751,9.788771e-7,6.328573e-7,0.00010831711,0.0000033263427,0.00035814254],"genre_scores_gemma":[0.99871933,0.00006652949,0.0003348851,0.000024482602,0.000002046838,0.0000020566074,0.0005787404,0.000004672043,0.0002672385],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999348,0.000009180182,0.0000021559506,0.000031256182,0.000008714288,0.000013968354],"domain_scores_gemma":[0.9999263,0.000017684553,0.000024541896,0.000007720007,0.0000064324977,0.000017319875],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011360285,0.00011785918,0.00015349286,0.0006467631,0.00034024488,0.0003458661,0.00012879276,0.00026942338,0.0009509474],"category_scores_gemma":[0.00019011635,0.00008292907,0.00014374028,0.0006851449,0.0003178571,0.00017351353,0.00032660077,0.00027244384,0.00019129628],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006934272,0.00012417854,0.40473667,0.00008155158,0.00016587885,0.00091279903,0.003996566,0.00086246576,0.56224823,0.0013022172,0.0003746148,0.024501413],"study_design_scores_gemma":[0.000005243757,0.00008244536,0.99266076,0.000007703717,0.000024042372,0.00054709334,0.0007207857,0.0005194257,0.0024364563,0.00014403703,0.002847031,0.0000050348854],"about_ca_topic_score_codex":0.002726643,"about_ca_topic_score_gemma":0.0076270145,"teacher_disagreement_score":0.002726643,"about_ca_system_score_codex":0.00024317743,"about_ca_system_score_gemma":0.0000943805,"threshold_uncertainty_score":0.0054214597},"labels":[],"label_agreement":null},{"id":"W4367694062","doi":"10.1016/j.isci.2023.106787","title":"Improving the extraction of ancient Yersinia pestis genomes from the dental pulp","year":2023,"lang":"en","type":"article","venue":"iScience","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Canadian Institute for Advanced Research","funders":"Agence Nationale de la Recherche; Centre National de la Recherche Scientifique; European Commission; Fondation Simone et Cino Del Duca","keywords":"Yersinia pestis; Ancient DNA; DNA; Genome; DNA sequencing; Biology; Pulp (tooth); DNA extraction; Computational biology; Polymerase chain reaction; Gene; Genetics; Medicine; Dentistry; Virulence","score_opus":0.01877890976111926,"score_gpt":0.2958583034894152,"score_spread":0.27707939372829593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4367694062","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9587256,0.0045766244,0.031474438,0.00022447789,0.000044758603,0.000109793946,0.0028480298,0.00018630008,0.0018100011],"genre_scores_gemma":[0.88923633,0.0060276766,0.0864207,0.00030804463,0.0000575969,0.00018224967,0.010835032,0.00019588521,0.006736577],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997055,0.000033557033,0.000019278048,0.00008244333,0.00008773721,0.00007146588],"domain_scores_gemma":[0.999764,0.00008179687,0.000048159276,0.000022593938,0.000063526495,0.00001995156],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003847191,0.0004561778,0.0004671519,0.0006657918,0.0003777681,0.0007518073,0.0002360872,0.0004928363,0.0011107577],"category_scores_gemma":[0.00060795393,0.00023821465,0.00034046033,0.00061932934,0.00025122846,0.00034453277,0.00044451022,0.00055756856,0.0010473955],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003206487,0.000014996002,0.001999652,0.000078859375,0.000007395598,0.000041398063,0.00011567746,0.00007273462,0.9922598,0.00003215916,0.000052528012,0.005292766],"study_design_scores_gemma":[0.00000799567,0.00029453615,0.07286785,0.000059071433,0.00007000405,0.00059344363,0.00046428907,0.0014070447,0.9110124,0.00014652929,0.013051154,0.00002553724],"about_ca_topic_score_codex":0.0013569859,"about_ca_topic_score_gemma":0.0035590017,"teacher_disagreement_score":0.0013569859,"about_ca_system_score_codex":0.00021174965,"about_ca_system_score_gemma":0.0003385533,"threshold_uncertainty_score":0.0037158728},"labels":[],"label_agreement":null},{"id":"W4376170963","doi":"","title":"RAVAGIILE CAUZATE DE OMIDA PĂROASĂ A DUDULUI (HYPHANTRIA CUNEA) ÎN MOLDOVA ŞI COMBATEREA CU PREPARATUL ECOLOGIC PUR VIRIN–ABB-3","year":2010,"lang":"ro","type":"article","venue":"DOAJ (DOAJ: Directory of Open Access Journals)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Hyphantria; Biology; Botany","score_opus":0.14158200902599608,"score_gpt":0.5512559885372637,"score_spread":0.4096739795112676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4376170963","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85752773,0.019492377,0.0023352192,0.0014090206,0.0004428301,0.00030100383,0.0020971254,0.00034918156,0.116045505],"genre_scores_gemma":[0.96328706,0.0033985963,0.0025252805,0.0003722388,0.000047040157,0.00008449491,0.0012185532,0.00004342487,0.029023241],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9998005,0.000016407626,0.000011024365,0.00006845267,0.000043600838,0.000060051752],"domain_scores_gemma":[0.9998386,0.00001959291,0.000043710956,0.000012715908,0.000036318925,0.000049026177],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016531463,0.0004342224,0.0003023383,0.0009985056,0.0011771634,0.0009975334,0.0004609215,0.00023437235,0.004533237],"category_scores_gemma":[0.00025243525,0.0001467672,0.0002786344,0.0007867669,0.00056248927,0.00032501106,0.001084732,0.0006544639,0.00051146094],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009957564,0.00032151488,0.104193114,0.0016727803,0.00014876816,0.003454307,0.0042222007,0.0010167089,0.21689966,0.0044512046,0.0109674465,0.6516566],"study_design_scores_gemma":[0.000042903343,0.00061490975,0.64067525,0.0003852297,0.00012486032,0.0013760503,0.0031884836,0.0007663407,0.030986847,0.00065692276,0.32113066,0.000051503852],"about_ca_topic_score_codex":0.063418165,"about_ca_topic_score_gemma":0.17392825,"teacher_disagreement_score":0.063418165,"about_ca_system_score_codex":0.001444284,"about_ca_system_score_gemma":0.0014924777,"threshold_uncertainty_score":0.12609804},"labels":[],"label_agreement":null},{"id":"W4376875066","doi":"10.1098/rsos.230021","title":"The role of reservoir species in mediating plague's dynamic response to climate","year":2023,"lang":"en","type":"article","venue":"Royal Society Open Science","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakehead University","funders":"Natural Environment Research Council; Sight Research UK","keywords":"Plague (disease); Precipitation; Yersinia pestis; Ecology; Range (aeronautics); Climate change; Ecological niche; Ecosystem; Environmental science; Geography; Biology; Habitat","score_opus":0.01383940858726732,"score_gpt":0.3311695639745121,"score_spread":0.31733015538724474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4376875066","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99855703,0.00013392045,0.00071746635,0.000040460127,0.0000028095608,0.000004358939,0.0000525036,0.000011469158,0.00047991812],"genre_scores_gemma":[0.99963295,0.000055100714,0.00020205158,0.000007864445,0.000001495111,0.0000023967275,0.000031609437,0.0000021701026,0.00006426144],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998348,0.000058060454,0.0000073546735,0.000033987304,0.00001351107,0.00005234271],"domain_scores_gemma":[0.9995803,0.00013414555,0.00010425439,0.000033801927,0.000045143675,0.00010228435],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048260883,0.00023944041,0.00030620367,0.00026500708,0.000329244,0.000666688,0.0002508075,0.00026589542,0.0009094372],"category_scores_gemma":[0.0009836869,0.00017445632,0.00030050174,0.00021358594,0.0003394338,0.00062706944,0.0006256871,0.00025663938,0.00013483917],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004891192,0.0001366734,0.7801214,0.0001411883,0.00018556604,0.00036924036,0.00073380437,0.008881275,0.19230212,0.0014667015,0.00022084145,0.014952035],"study_design_scores_gemma":[0.00001051782,0.00011411177,0.9777315,0.000008000763,0.000043944485,0.00010226553,0.00051027274,0.017149167,0.00304285,0.00083592837,0.0004361305,0.000015270534],"about_ca_topic_score_codex":0.004619643,"about_ca_topic_score_gemma":0.0056642764,"teacher_disagreement_score":0.004619643,"about_ca_system_score_codex":0.00030503207,"about_ca_system_score_gemma":0.00039804325,"threshold_uncertainty_score":0.009185553},"labels":[],"label_agreement":null},{"id":"W4377251439","doi":"10.1515/9780228004899","title":"Swan of the Well by Titia Brongersma","year":2020,"lang":"en","type":"book","venue":"McGill-Queen's University Press eBooks","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Novelis (Canada)","funders":"","keywords":"Geology","score_opus":0.009135643025573644,"score_gpt":0.20975088114038287,"score_spread":0.20061523811480922,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377251439","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0077794194,0.062817074,0.00063923415,0.033405304,0.016321154,0.000042318523,0.0002302145,0.00013870404,0.8786266],"genre_scores_gemma":[0.020271765,0.006652273,0.00044872938,0.0040606167,0.0007100644,0.00002379054,0.000081191836,0.000097864446,0.9676537],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99984396,0.000029742932,0.0000042990914,0.000034811434,0.000054271775,0.000032969776],"domain_scores_gemma":[0.9999285,0.000020010984,0.0000059319286,0.000007984369,0.000014445338,0.00002310356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030537686,0.00045520373,0.00023616034,0.0005189508,0.0029752718,0.0021923576,0.0003400414,0.0007426717,0.024890132],"category_scores_gemma":[0.00051834004,0.00022917018,0.0001800189,0.00043991941,0.0027605193,0.002487432,0.0020211393,0.0028768375,0.0072289743],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039487655,0.000026801727,0.00024991264,0.00013678902,0.000004928626,0.00034591852,0.008256289,0.00005735894,0.0007722094,0.13699088,0.7975617,0.055557776],"study_design_scores_gemma":[0.0000012307094,0.00000382447,0.00017397015,0.0000471945,6.676335e-7,0.00007387634,0.00044532234,0.000005321806,0.000028161348,0.0012706978,0.9979479,0.0000018742862],"about_ca_topic_score_codex":0.0201732,"about_ca_topic_score_gemma":0.077789664,"teacher_disagreement_score":0.024890132,"about_ca_system_score_codex":0.0018019978,"about_ca_system_score_gemma":0.0019243639,"threshold_uncertainty_score":0.08326578},"labels":[],"label_agreement":null},{"id":"W4381161963","doi":"10.1016/s2666-5247(23)00106-4","title":"Paenibacillus spp infection among infants with postinfectious hydrocephalus in Uganda: an observational case-control study","year":2023,"lang":"en","type":"article","venue":"The Lancet Microbe","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Eunice Kennedy Shriver National Institute of Child Health and Human Development; Medical Research Council; Genentech; National Institutes of Health","keywords":"Hydrocephalus; Paenibacillus; Sepsis; Medicine; Meningitis; Neonatal sepsis; Cohort; Cohort study; Cord blood; Pediatrics; Obstetrics; Internal medicine; Biology; Surgery; Bacteria; 16S ribosomal RNA","score_opus":0.03934938662129346,"score_gpt":0.31275054886603926,"score_spread":0.2734011622447458,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4381161963","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99937147,0.00029289545,0.00007398378,0.000011101298,0.0000035436362,0.000043302603,0.00009797847,0.0000013975624,0.00010430579],"genre_scores_gemma":[0.99911255,0.0003067406,0.00018515707,0.00004075375,0.000009983537,0.00010531064,0.00016122696,0.0000015879684,0.00007674529],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985567,0.00044865822,0.00021587567,0.0003763779,0.00020148748,0.00020080685],"domain_scores_gemma":[0.99762636,0.00047451365,0.0009906195,0.00030648246,0.00030085564,0.0003011039],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012607487,0.0006213893,0.00089746417,0.0012582588,0.001297455,0.000959134,0.00078981405,0.00083161297,0.0011143846],"category_scores_gemma":[0.0040795193,0.0012012527,0.0004586877,0.0013321539,0.000898324,0.0006655437,0.0010614925,0.0006263378,0.00023840982],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023118088,0.00020600122,0.99681276,0.000064418,0.00006247598,0.00057659077,0.0007023495,0.000013780809,0.00027518914,0.000023942946,0.00008824501,0.00094302994],"study_design_scores_gemma":[0.00006395665,0.0010849036,0.99370545,0.000086509994,0.000107209744,0.0024397264,0.0017832319,0.00014465621,0.000085304775,0.000042705604,0.00044089265,0.00001542904],"about_ca_topic_score_codex":0.0062547065,"about_ca_topic_score_gemma":0.0055707274,"teacher_disagreement_score":0.0062547065,"about_ca_system_score_codex":0.0006123964,"about_ca_system_score_gemma":0.0005574145,"threshold_uncertainty_score":0.012436569},"labels":[],"label_agreement":null},{"id":"W4382247878","doi":"10.1099/acmi.0.000525.v1.6","title":"Editor response for version 1","year":2023,"lang":"en","type":"peer-review","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Yersinia pseudotuberculosis; Mesenteric lymph nodes; Bacteremia; Medicine; Yersinia enterocolitica; Cirrhosis; Outbreak; Spleen; Yersinia; Microbiology; Internal medicine; Antibiotics; Pathology; Biology; Bacteria","score_opus":0.028439019203380093,"score_gpt":0.3653829945513104,"score_spread":0.3369439753479303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382247878","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00028772,0.0029443104,0.00095462275,0.12687434,0.6308231,0.00045434633,0.005003263,0.0027112036,0.2299471],"genre_scores_gemma":[0.00269989,0.0030986713,0.0008875523,0.07156057,0.08467414,0.0003587313,0.0029765875,0.001450756,0.83229315],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99787116,0.00045362744,0.0002418675,0.00036697212,0.0008007821,0.0002655508],"domain_scores_gemma":[0.9872678,0.0018995431,0.00041020935,0.0007490653,0.0073695406,0.002303959],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0022881168,0.0010100559,0.0011739362,0.0017331772,0.0015401314,0.005409488,0.002461385,0.004920194,0.80089843],"category_scores_gemma":[0.027338324,0.00045312697,0.0010416013,0.0008848032,0.0006361279,0.0033844362,0.0029240004,0.005182591,0.57940316],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013308263,0.0000048019388,0.000017540056,0.00007514076,0.000001202771,0.0000258988,0.000007384241,0.000004236048,0.000013699451,0.0001613512,0.9917504,0.007925018],"study_design_scores_gemma":[0.000011218374,0.0000074639165,0.000060700113,0.00014383817,0.0000015191644,0.000045922574,0.000036162106,0.000009712045,0.000023764545,0.00020038403,0.9994549,0.000004461433],"about_ca_topic_score_codex":0.0009812377,"about_ca_topic_score_gemma":0.0020398914,"teacher_disagreement_score":0.80089843,"about_ca_system_score_codex":0.001247122,"about_ca_system_score_gemma":0.002061984,"threshold_uncertainty_score":0.28399414},"labels":[],"label_agreement":null},{"id":"W4382982235","doi":"10.31234/osf.io/kr75f","title":"Accordance and conflict between religious and scientific precautions against COVID-19 in 27 societies","year":2023,"lang":"en","type":"preprint","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University; Nipissing University; University of Guelph","funders":"","keywords":"Meaning (existential); Social psychology; Environmental ethics; Pandemic; Prayer; Perception; Vulnerability (computing); Psychology; Coronavirus disease 2019 (COVID-19); Criminology; Sociology; Political science; Medicine","score_opus":0.07463275649510913,"score_gpt":0.36660262064474386,"score_spread":0.2919698641496347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382982235","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995011,0.000050056777,0.000034752735,0.000036843507,0.0000015099412,0.0000020978937,0.000022334594,6.646723e-7,0.0003505827],"genre_scores_gemma":[0.9998022,0.00004156474,0.000052888987,0.00001419593,0.0000012460013,0.000003564674,0.00003421534,5.893563e-7,0.00004963966],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99792707,0.0010111746,0.00020171926,0.000254401,0.0002539322,0.00035157357],"domain_scores_gemma":[0.9890302,0.003401594,0.004827706,0.00077654177,0.0010696478,0.0008943104],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002418148,0.0001445595,0.0002783142,0.0009217686,0.001160025,0.0011834742,0.00033340685,0.0003418804,0.0014968044],"category_scores_gemma":[0.009851265,0.00021239021,0.0002539435,0.0012336834,0.0019056095,0.00063496426,0.0019267366,0.00064421986,0.00013209335],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000088031666,0.00004456469,0.97399175,0.000036355443,0.00007761325,0.00013560889,0.01578671,0.000092956114,0.00035567634,0.00039770568,0.00019475177,0.008798286],"study_design_scores_gemma":[0.000006401854,0.000063120315,0.98057646,0.000025788624,0.000024935742,0.00012860235,0.018019116,0.00019778925,0.00012689478,0.00023002671,0.0005872563,0.000013568088],"about_ca_topic_score_codex":0.006373612,"about_ca_topic_score_gemma":0.010071358,"teacher_disagreement_score":0.006373612,"about_ca_system_score_codex":0.0006751868,"about_ca_system_score_gemma":0.00068233314,"threshold_uncertainty_score":0.012788534},"labels":[],"label_agreement":null},{"id":"W4383981964","doi":"10.2992/007.088.0102","title":"An Assemblage of Fleas (Siphonaptera) From Canada, México, and the United States of America, in the Hastriter Collecton (Brigham Young University)","year":2023,"lang":"en","type":"article","venue":"Annals of Carnegie Museum","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Assemblage (archaeology); Geography; Archaeology; Flea; Ecology; Biology","score_opus":0.026231408836221,"score_gpt":0.2847807054697153,"score_spread":0.2585492966334943,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4383981964","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7791053,0.0062697926,0.0006574913,0.0002974929,0.000075099495,0.0005866419,0.17522413,0.00024365862,0.03754034],"genre_scores_gemma":[0.6918728,0.013987296,0.0068111303,0.0003982426,0.00006476982,0.00041957432,0.22594135,0.00014698999,0.06035792],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99978596,0.000005909775,0.00001814304,0.000040274594,0.00009990356,0.000049921324],"domain_scores_gemma":[0.9995283,0.000022950218,0.00006958838,0.000020015206,0.0002427641,0.00011651015],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022444098,0.00040004626,0.0002887212,0.0094605135,0.002499499,0.0007176094,0.00034419826,0.00013320163,0.008698398],"category_scores_gemma":[0.00041808106,0.00026304438,0.00022697239,0.009422754,0.0002944671,0.00038108043,0.0006420439,0.00025763278,0.0012475644],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001960398,0.000046998204,0.75903624,0.00073962816,0.00020376653,0.0006715644,0.0066664214,0.00014689803,0.007455635,0.00046300708,0.07612138,0.14825243],"study_design_scores_gemma":[0.000002701116,0.0000129343225,0.9585067,0.000053756266,0.000019757597,0.0001566447,0.0014572619,0.000029478539,0.00014576044,0.000011301924,0.039596803,0.0000069003845],"about_ca_topic_score_codex":0.8860948,"about_ca_topic_score_gemma":0.9786163,"teacher_disagreement_score":0.11390519,"about_ca_system_score_codex":0.0038044436,"about_ca_system_score_gemma":0.00631651,"threshold_uncertainty_score":0.22915196},"labels":[],"label_agreement":null},{"id":"W4384705695","doi":"10.7202/1098673ar","title":"Desclaux Alice, Anthony Billaud et Khoudia Sow (dir.), 2022, Anthropologie appliquée aux épidémies émergentes. Paris, L’Harmattan, coll. « Anthropologies et Médecines », 307 p., illustr., bibliogr.","year":2023,"lang":"fr","type":"article","venue":"Anthropologie et Sociétés","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"","keywords":"Humanities; Art","score_opus":0.15802807227196625,"score_gpt":0.5430975085145241,"score_spread":0.38506943624255785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384705695","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00010705345,0.90623534,0.0002849963,0.06260789,0.021874432,0.00001906976,0.00042511892,0.000056070363,0.008389951],"genre_scores_gemma":[0.0033039781,0.872245,0.00087077956,0.01717306,0.020429276,0.000130598,0.0007146029,0.00017188898,0.084960796],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9970065,0.0010463719,0.00028799,0.0003415248,0.0010986389,0.0002190267],"domain_scores_gemma":[0.99648416,0.0014402819,0.0005382058,0.00009252445,0.0011036065,0.00034120513],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0031414903,0.00248785,0.0016419479,0.004196372,0.0025343287,0.005071501,0.0014919022,0.0040312964,0.041437056],"category_scores_gemma":[0.007470441,0.00142383,0.00087829016,0.0070248055,0.0024344085,0.0068261405,0.0024239789,0.0077219824,0.032810003],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033877128,0.000005154797,0.00015963486,0.000489014,0.00001083249,0.00006614192,0.0003212328,0.000024281975,0.00004459125,0.0022314738,0.9616173,0.034996442],"study_design_scores_gemma":[0.0000058412566,0.0000058613678,0.0007484578,0.0005223092,0.000006770512,0.00010866706,0.000338852,0.000010488934,0.000045056644,0.0009392542,0.9972584,0.00001001156],"about_ca_topic_score_codex":0.051823966,"about_ca_topic_score_gemma":0.07169774,"teacher_disagreement_score":0.051823966,"about_ca_system_score_codex":0.0062160175,"about_ca_system_score_gemma":0.005378595,"threshold_uncertainty_score":0.1386208},"labels":[],"label_agreement":null},{"id":"W4385064135","doi":"10.1038/s43705-023-00283-z","title":"Rapid and accurate taxonomic classification of cpn60 amplicon sequence variants","year":2023,"lang":"en","type":"article","venue":"ISME Communications","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Amplicon; Biology; Computational biology; Classifier (UML); Barcode; Microbiome; Bayesian probability; Naive Bayes classifier; Genetics; Artificial intelligence; Gene; Computer science; Polymerase chain reaction","score_opus":0.15251839522971322,"score_gpt":0.3728613052560732,"score_spread":0.22034291002635997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385064135","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7528232,0.0014126872,0.23200236,0.0003237901,0.0001350839,0.00036353493,0.007769943,0.0019133793,0.0032559596],"genre_scores_gemma":[0.71462995,0.00041078456,0.27228668,0.00016748578,0.000037199563,0.00019489968,0.010237249,0.0001813388,0.0018543964],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99865085,0.0002258979,0.0001223157,0.00049756747,0.00037358174,0.00012981753],"domain_scores_gemma":[0.9984244,0.00037523732,0.00020821216,0.00014575264,0.00075067574,0.00009580933],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016266381,0.0004864559,0.0005167033,0.0016033411,0.00042490565,0.00093798415,0.0005017646,0.00072935555,0.0011321272],"category_scores_gemma":[0.0044072145,0.00023879361,0.00045312717,0.00081767136,0.00024493824,0.0008097782,0.0008358613,0.0005947174,0.001444383],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00065436354,0.00021838865,0.090192564,0.0003473122,0.000068152534,0.00020390585,0.00040189008,0.0030214726,0.6850776,0.00060419634,0.0028995892,0.2163105],"study_design_scores_gemma":[0.000057946003,0.0005805455,0.33779234,0.00020648628,0.00012234233,0.0015581289,0.0007606206,0.24748811,0.39081717,0.002825237,0.017600507,0.00019063013],"about_ca_topic_score_codex":0.0021996712,"about_ca_topic_score_gemma":0.003517811,"teacher_disagreement_score":0.0021996712,"about_ca_system_score_codex":0.0003347292,"about_ca_system_score_gemma":0.0003723,"threshold_uncertainty_score":0.008602619},"labels":[],"label_agreement":null},{"id":"W4385161975","doi":"10.1515/jah-2022-0009","title":"Memorialization in Thucydides’ Plague Episode","year":2023,"lang":"en","type":"article","venue":"Journal of Ancient History","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Western University","funders":"","keywords":"Plague (disease); Memorialization; History; Quarter (Canadian coin); Narrative; Variety (cybernetics); Population; Focus (optics); Pathos; Genealogy; Ancient history; Classics; Literature; Art; Sociology; Political science; Archaeology; Law; Demography","score_opus":0.0234347107072573,"score_gpt":0.27904763616895045,"score_spread":0.2556129254616932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385161975","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8609649,0.0047838995,0.0007766401,0.008669068,0.00071153324,0.00002830563,0.000055233744,0.000026397238,0.123983994],"genre_scores_gemma":[0.9867394,0.0009628924,0.00013900637,0.00042842687,0.00008128779,0.00000750785,0.000014191134,0.0000068247846,0.011620461],"study_design_codex":"qualitative","study_design_gemma":"not_applicable","domain_scores_codex":[0.99930775,0.00036382145,0.00001885733,0.00005626055,0.000091681235,0.0001615919],"domain_scores_gemma":[0.99954766,0.00017755553,0.00008900831,0.00002831743,0.0000577918,0.000099612065],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010668427,0.00026486162,0.00032266066,0.0006348611,0.008202137,0.0027065922,0.0003789033,0.0013999043,0.00376934],"category_scores_gemma":[0.0014247735,0.00018815714,0.00010630097,0.00048691008,0.008111067,0.0016758601,0.004626355,0.002155569,0.0003177862],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014127378,0.00004572883,0.0022847187,0.00017852787,0.000009753822,0.0027029188,0.85854906,0.000078757075,0.0031725275,0.11276393,0.0067636934,0.013309164],"study_design_scores_gemma":[0.000013396068,0.00014146579,0.012467395,0.00025211045,0.000015662861,0.002510124,0.36719096,0.000121045035,0.0027309651,0.0062755076,0.60824895,0.000032340286],"about_ca_topic_score_codex":0.0034422823,"about_ca_topic_score_gemma":0.009124952,"teacher_disagreement_score":0.008202137,"about_ca_system_score_codex":0.0040220884,"about_ca_system_score_gemma":0.0009166822,"threshold_uncertainty_score":0.029182434},"labels":[],"label_agreement":null},{"id":"W4385243949","doi":"10.1017/rqx.2023.229","title":": <i>The Black Death: A New History of the Great Mortality in Europe, 1347–1500</i>","year":2023,"lang":"en","type":"article","venue":"Renaissance Quarterly","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University; University of Ottawa","funders":"","keywords":"History","score_opus":0.032619892021407505,"score_gpt":0.2864415714916831,"score_spread":0.25382167947027556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385243949","genre_codex":"commentary","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0093502,0.2598969,0.00093751296,0.5160925,0.11909221,0.000040217583,0.0027772572,0.0002639032,0.091549285],"genre_scores_gemma":[0.13973412,0.19691053,0.0015648609,0.21135397,0.16061646,0.00011511478,0.0029101844,0.00040436847,0.28639042],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99975055,0.0000657169,0.000024463186,0.000042628722,0.00007019694,0.000046489695],"domain_scores_gemma":[0.9993241,0.00020454131,0.00013706871,0.000032352396,0.0001477205,0.00015415414],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009891565,0.0004706402,0.00028784142,0.0013358275,0.0014117588,0.00282215,0.0004785928,0.0024773593,0.022159852],"category_scores_gemma":[0.0021042237,0.00013358373,0.0002014804,0.0019235562,0.0017788464,0.0022930151,0.0013150959,0.002642246,0.004446243],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056072247,0.000008224871,0.0022025446,0.00032191307,0.000013299972,0.00021249232,0.0017454472,0.000024454557,0.00021047547,0.007091699,0.9399009,0.048212454],"study_design_scores_gemma":[0.0000037062082,0.000012953541,0.011055919,0.00030193015,0.000005096576,0.00034361938,0.0010457864,0.000010020093,0.000060165185,0.0010909308,0.9860596,0.00001024135],"about_ca_topic_score_codex":0.011136481,"about_ca_topic_score_gemma":0.02805375,"teacher_disagreement_score":0.022159852,"about_ca_system_score_codex":0.0010381573,"about_ca_system_score_gemma":0.00110955,"threshold_uncertainty_score":0.074132085},"labels":[],"label_agreement":null},{"id":"W4385637543","doi":"10.1099/acmi.0.000525.v2","title":"Yersinia pseudotuberculosis Bacteremia with Splenic Abscesses: A Case Report","year":2023,"lang":"en","type":"preprint","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Providence Health Care; University of Toronto","funders":"","keywords":"Yersinia pseudotuberculosis; Leukocytosis; Bacteremia; Medicine; Septic shock; Ceftriaxone; Differential diagnosis; Chronic liver disease; Pathology; Corynebacterium pseudotuberculosis; Internal medicine; Ascites; Gastroenterology; Splenic disease; Cirrhosis; Microbiology; Biology; Sepsis; Splenectomy; Spleen; Antibiotics; Bacteria","score_opus":0.03114466790912787,"score_gpt":0.3159536706106945,"score_spread":0.2848090027015666,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385637543","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9705555,0.009561797,0.0042092353,0.0032304642,0.0006190775,0.00034416374,0.00040389624,0.00027424935,0.010801611],"genre_scores_gemma":[0.994655,0.0015668217,0.0010192626,0.0005978938,0.0011190342,0.000044436314,0.00010223233,0.000025392848,0.0008699851],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99855393,0.00014844167,0.00015496582,0.00041191326,0.00018377602,0.00054687983],"domain_scores_gemma":[0.9972172,0.00064496405,0.00048745718,0.00031551503,0.00012352565,0.0012113946],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007983829,0.0038957905,0.0021316917,0.004784781,0.0054519917,0.0034242088,0.0017272349,0.008587978,0.0047751386],"category_scores_gemma":[0.0038404893,0.0031181993,0.0019293176,0.0031346122,0.0035331456,0.003574099,0.0038658916,0.005082964,0.0022998662],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036935515,0.0000673965,0.003948519,0.000037859012,0.000011409716,0.9946491,0.00021883268,0.000038261467,0.000258843,0.000094543466,0.00014421575,0.00049410766],"study_design_scores_gemma":[0.000021363247,0.000058221547,0.0034272966,0.00001679466,0.000014078318,0.9956636,0.00017414843,0.00009892425,0.00015510502,0.00008654195,0.000272142,0.000011774705],"about_ca_topic_score_codex":0.0023977128,"about_ca_topic_score_gemma":0.0020465467,"teacher_disagreement_score":0.008587978,"about_ca_system_score_codex":0.0017832638,"about_ca_system_score_gemma":0.0012188884,"threshold_uncertainty_score":0.015974402},"labels":[],"label_agreement":null},{"id":"W4385704223","doi":"10.1016/j.isci.2023.107575","title":"Preservation of whole antibodies within ancient teeth","year":2023,"lang":"en","type":"article","venue":"iScience","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Versus Arthritis","keywords":"Antibody; Western blot; Biology; Immune system; Immunity; Evolutionary biology; Immunology; Gene; Genetics","score_opus":0.030182329313386845,"score_gpt":0.32230063125740277,"score_spread":0.29211830194401595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385704223","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96015024,0.0052154036,0.027559906,0.00030564968,0.000074026575,0.00004007348,0.00072541105,0.00013641812,0.0057928707],"genre_scores_gemma":[0.97335887,0.0023786565,0.016457077,0.0002596975,0.00003364027,0.000034886198,0.0012233006,0.0000745263,0.006179332],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998735,0.000016106864,0.000010135353,0.000043308904,0.00002445045,0.000032472777],"domain_scores_gemma":[0.9997938,0.00005417939,0.000037877886,0.00004459821,0.000044850713,0.00002475569],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029386103,0.00027996182,0.0001628359,0.00043577634,0.00027828477,0.00034976305,0.0002540934,0.0004192808,0.0016338432],"category_scores_gemma":[0.00039511218,0.00015590979,0.00020142127,0.0002660273,0.00034743952,0.00029414525,0.0003158775,0.0004602449,0.00064497424],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038658814,0.000008060789,0.0018516525,0.000046866648,0.000012566691,0.00007144914,0.000055398534,0.000023142733,0.9938083,0.00016886507,0.00007418773,0.0038408705],"study_design_scores_gemma":[0.00001099338,0.00027249553,0.09220162,0.000049991067,0.000089512745,0.0018917483,0.00020985256,0.0005670371,0.8821228,0.00048129022,0.022090334,0.000012232591],"about_ca_topic_score_codex":0.0007496836,"about_ca_topic_score_gemma":0.0016297378,"teacher_disagreement_score":0.0016338432,"about_ca_system_score_codex":0.00017626533,"about_ca_system_score_gemma":0.00020563611,"threshold_uncertainty_score":0.0054658055},"labels":[],"label_agreement":null},{"id":"W4386474980","doi":"10.32920/24089154.v1","title":"Uncovering an Important Role for YopJ in the Inhibition of Caspase-1 in Activated Macrophages and Promoting Yersinia pseudotuberculosis Virulence","year":2023,"lang":"en","type":"preprint","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"National Institutes of Health","keywords":"Yersinia pseudotuberculosis; Effector; Microbiology; Yersinia; Biology; Mutant; Type three secretion system; Inflammasome; Innate immune system; Yersinia pestis; Virulence; Secretion; Cell biology; Immune system; Bacteria; Inflammation; Gene; Immunology; Biochemistry","score_opus":0.02282428342302701,"score_gpt":0.31069533199291494,"score_spread":0.28787104856988793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386474980","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99664366,0.00043207518,0.002153139,0.00012128623,0.000008813732,0.000013493031,0.0001884867,0.000035909114,0.00040321297],"genre_scores_gemma":[0.9968233,0.00023185143,0.0019328767,0.000034442717,0.000003484697,0.00001833787,0.00017615162,0.000009384629,0.0007702183],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998871,0.000022334463,0.000012988612,0.000022109823,0.00002794946,0.000027509506],"domain_scores_gemma":[0.99987006,0.000025276378,0.000044973636,0.000013862602,0.000011183683,0.000034647433],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015796075,0.00035575713,0.00028150217,0.00027934884,0.00016824303,0.00028368234,0.00030038744,0.00040045282,0.0010365053],"category_scores_gemma":[0.00014711986,0.00015058392,0.0002572754,0.00020185999,0.00027890442,0.0002282336,0.00040037534,0.00046465977,0.00019162908],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011687144,0.000018322296,0.00043525314,0.000022721584,0.0000030434182,0.00012177651,0.000010458793,0.000059233666,0.998596,0.00008443091,0.000011245778,0.000520459],"study_design_scores_gemma":[0.00007177317,0.0005818283,0.056520786,0.000019221816,0.000051981824,0.0019458323,0.00027202262,0.0072372877,0.93050563,0.00036380658,0.002410078,0.000019743497],"about_ca_topic_score_codex":0.0006335271,"about_ca_topic_score_gemma":0.00086200394,"teacher_disagreement_score":0.0010365053,"about_ca_system_score_codex":0.00027555722,"about_ca_system_score_gemma":0.00028401654,"threshold_uncertainty_score":0.0034674406},"labels":[],"label_agreement":null},{"id":"W4386475126","doi":"10.32920/24089154","title":"Uncovering an Important Role for YopJ in the Inhibition of Caspase-1 in Activated Macrophages and Promoting Yersinia pseudotuberculosis Virulence","year":2023,"lang":"en","type":"preprint","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"National Institutes of Health","keywords":"Yersinia pseudotuberculosis; Effector; Microbiology; Yersinia; Mutant; Type three secretion system; Biology; Inflammasome; Innate immune system; Yersinia pestis; Secretion; Virulence; Cell biology; Immune system; Inflammation; Bacteria; Gene; Immunology; Biochemistry","score_opus":0.02282428342302701,"score_gpt":0.31069533199291494,"score_spread":0.28787104856988793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386475126","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99664366,0.00043207518,0.002153139,0.00012128623,0.000008813732,0.000013493031,0.0001884867,0.000035909114,0.00040321297],"genre_scores_gemma":[0.9968233,0.00023185143,0.0019328767,0.000034442717,0.000003484697,0.00001833787,0.00017615162,0.000009384629,0.0007702183],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998871,0.000022334463,0.000012988612,0.000022109823,0.00002794946,0.000027509506],"domain_scores_gemma":[0.99987006,0.000025276378,0.000044973636,0.000013862602,0.000011183683,0.000034647433],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015796075,0.00035575713,0.00028150217,0.00027934884,0.00016824303,0.00028368234,0.00030038744,0.00040045282,0.0010365053],"category_scores_gemma":[0.00014711986,0.00015058392,0.0002572754,0.00020185999,0.00027890442,0.0002282336,0.00040037534,0.00046465977,0.00019162908],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011687144,0.000018322296,0.00043525314,0.000022721584,0.0000030434182,0.00012177651,0.000010458793,0.000059233666,0.998596,0.00008443091,0.000011245778,0.000520459],"study_design_scores_gemma":[0.00007177317,0.0005818283,0.056520786,0.000019221816,0.000051981824,0.0019458323,0.00027202262,0.0072372877,0.93050563,0.00036380658,0.002410078,0.000019743497],"about_ca_topic_score_codex":0.0006335271,"about_ca_topic_score_gemma":0.00086200394,"teacher_disagreement_score":0.0010365053,"about_ca_system_score_codex":0.00027555722,"about_ca_system_score_gemma":0.00028401654,"threshold_uncertainty_score":0.0034674406},"labels":[],"label_agreement":null},{"id":"W4387014112","doi":"10.1099/acmi.0.000525.v3","title":"Yersinia pseudotuberculosis bacteraemia with splenic abscesses: a case report","year":2023,"lang":"en","type":"article","venue":"Access Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre; St. Paul's Hospital; University of British Columbia; Providence Health Care; University of Toronto","funders":"","keywords":"Yersinia pseudotuberculosis; Leukocytosis; Medicine; Corynebacterium pseudotuberculosis; Gastroenterology; Internal medicine; Septic shock; Differential diagnosis; Ceftriaxone; Pathology; Chronic liver disease; Ascites; Cirrhosis; Microbiology; Sepsis; Antibiotics; Biology; Bacteria","score_opus":0.018527717394252567,"score_gpt":0.31987179349144435,"score_spread":0.30134407609719177,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387014112","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96127987,0.014489202,0.0046742954,0.0047751092,0.0009765168,0.00036721147,0.00040849418,0.0003379718,0.012691228],"genre_scores_gemma":[0.9932167,0.0023134407,0.001059148,0.0007360205,0.0015141646,0.00005474694,0.00011161199,0.000023269045,0.0009709807],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.998409,0.00017808886,0.00019580022,0.00040623988,0.00020309136,0.00060791336],"domain_scores_gemma":[0.9974058,0.0006079863,0.0005547225,0.0002783615,0.00013368035,0.0010194884],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00085409125,0.004298104,0.0023081352,0.0051192367,0.005091575,0.003524383,0.0018354143,0.009604235,0.003960336],"category_scores_gemma":[0.0037115952,0.0031868205,0.0019767738,0.0030489957,0.0035330062,0.004102089,0.0038513895,0.005649567,0.0020682781],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024743194,0.00004978174,0.00338499,0.000034565473,0.000008608213,0.9953686,0.00015353579,0.000028134782,0.00023290957,0.000084693944,0.00017172922,0.00045777363],"study_design_scores_gemma":[0.000014751017,0.00004299873,0.0023791788,0.000014891558,0.000009506196,0.99686974,0.000149308,0.00008881413,0.00010044725,0.000071440154,0.00024955644,0.000009423444],"about_ca_topic_score_codex":0.0020865896,"about_ca_topic_score_gemma":0.0019856328,"teacher_disagreement_score":0.009604235,"about_ca_system_score_codex":0.001863251,"about_ca_system_score_gemma":0.0012934813,"threshold_uncertainty_score":0.0135189295},"labels":[],"label_agreement":null},{"id":"W4387770767","doi":"10.21203/rs.3.rs-3454831/v1","title":"Associations between rat infestations and mental health vary by gender, race, and income in Chicago","year":2023,"lang":"en","type":"preprint","venue":"Research Square","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"National Science Foundation","keywords":"Race (biology); Mental health; Psychology; Geography; Demographic economics; Socioeconomics; Demography; Sociology; Gender studies; Economics; Psychiatry","score_opus":0.06649786879478045,"score_gpt":0.4266552352251482,"score_spread":0.3601573664303678,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387770767","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9997125,0.000035945395,0.00002216454,0.000024498839,0.0000014818067,0.000002144299,0.00006044849,9.2025203e-7,0.00013987317],"genre_scores_gemma":[0.99977857,0.000030249788,0.000029079174,0.000011980836,0.000002301964,0.000003746565,0.000060195154,3.816903e-7,0.00008359454],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99979144,0.00007086755,0.000015230921,0.000037261474,0.000032686974,0.000052534375],"domain_scores_gemma":[0.9992067,0.00012527838,0.00036830283,0.000030656087,0.00009084917,0.00017821771],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031102446,0.000116233365,0.00010225324,0.00051769125,0.00039377747,0.00033665996,0.0001680511,0.00018013532,0.0015647984],"category_scores_gemma":[0.00084742846,0.00014520383,0.00018033313,0.0004175991,0.0002958358,0.0002086874,0.00039039782,0.00026949277,0.00009965644],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013540538,0.000016958797,0.99938905,0.00000220422,0.00000733084,0.000011666574,0.000072665636,0.000010635928,0.000062292944,0.0000060400666,0.000044232256,0.00036345172],"study_design_scores_gemma":[7.8535174e-7,0.000022515882,0.99945146,0.0000034957175,0.0000050595145,0.000021139029,0.0003551243,0.0000685096,0.000022439954,0.0000078923385,0.000040627776,9.739108e-7],"about_ca_topic_score_codex":0.022194166,"about_ca_topic_score_gemma":0.05009268,"teacher_disagreement_score":0.022194166,"about_ca_system_score_codex":0.00031516067,"about_ca_system_score_gemma":0.0002938585,"threshold_uncertainty_score":0.044129968},"labels":[],"label_agreement":null},{"id":"W4388146023","doi":"10.15353/cjo.v84i4.5112","title":"Uvéite intermédiaire : relation avec la sclérose en plaques et considérations uniques en matière de prise en charge","year":2022,"lang":"fr","type":"article","venue":"Canadian journal of optometry/CJO. Canadian journal of optometry","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Humanities; Medicine; Art","score_opus":0.009504031275845566,"score_gpt":0.318074056265934,"score_spread":0.3085700249900884,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388146023","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92312413,0.045879006,0.0023076627,0.002779792,0.00011118404,0.00006351082,0.00015863047,0.00007979454,0.02549633],"genre_scores_gemma":[0.990275,0.0060760924,0.0010042697,0.00018393245,0.00031850763,0.000011715023,0.00005586655,0.000011033473,0.0020636679],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.999332,0.00015049837,0.00007313136,0.000113532384,0.000188319,0.00014241958],"domain_scores_gemma":[0.99677604,0.001081188,0.0013875111,0.00013507588,0.00027134275,0.0003488327],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00095935416,0.00043841486,0.00036529667,0.00184828,0.00079108437,0.0018281005,0.00029230746,0.0010217669,0.005865589],"category_scores_gemma":[0.0037211145,0.00023452459,0.00042920254,0.0010844675,0.0009973358,0.0010101551,0.00056186254,0.0010612422,0.0005820514],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008083743,0.00017990885,0.8568125,0.00037260316,0.00012398299,0.046302892,0.0008298647,0.0002529569,0.0128048565,0.0019754437,0.0011457851,0.0783908],"study_design_scores_gemma":[0.000027851385,0.00059564505,0.6823081,0.00035277827,0.00023801059,0.28913543,0.0017569972,0.00066939014,0.0063236402,0.0023030508,0.01621758,0.00007169399],"about_ca_topic_score_codex":0.0019683356,"about_ca_topic_score_gemma":0.0026450485,"teacher_disagreement_score":0.005865589,"about_ca_system_score_codex":0.0008264742,"about_ca_system_score_gemma":0.0005751871,"threshold_uncertainty_score":0.019622386},"labels":[],"label_agreement":null},{"id":"W4388733763","doi":"10.1111/mec.17205","title":"Population genomics of the muskox' resilience in the near absence of genetic variation","year":2023,"lang":"en","type":"article","venue":"Molecular Ecology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Novo Nordisk Fonden; Danmarks Frie Forskningsfond; Carlsbergfondet","keywords":"Biology; Variation (astronomy); Population genomics; Genomics; Resilience (materials science); Evolutionary biology; Genetic variation; Population; Genetics; Genome; Demography; Gene","score_opus":0.008438693442375474,"score_gpt":0.26572739544485807,"score_spread":0.2572887020024826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388733763","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99927086,0.00007924332,0.00019079701,0.000020129062,0.0000010981657,0.0000010173511,0.00024348726,0.0000057992384,0.00018756653],"genre_scores_gemma":[0.9989214,0.000064062784,0.00031403673,0.00002888968,0.0000023781945,0.0000041427943,0.00049024925,0.0000054802563,0.0001694458],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99995387,0.0000057674606,0.0000021885219,0.000023860955,0.0000063111925,0.000008091175],"domain_scores_gemma":[0.99988544,0.000030369458,0.000041782147,0.000010027563,0.00001416348,0.00001814571],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014549932,0.00010462456,0.00015269159,0.00032287455,0.00022287105,0.00020942632,0.00010112955,0.00016666263,0.000731579],"category_scores_gemma":[0.00030516647,0.000079830286,0.00013960838,0.00034774872,0.00015545792,0.00020496587,0.0002491912,0.00025720548,0.000065986416],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025603277,0.000034462784,0.32204503,0.00011839913,0.00026219743,0.00025700728,0.002224688,0.0014332228,0.6561692,0.0008436268,0.00032738614,0.016028725],"study_design_scores_gemma":[0.0000018220569,0.000026344947,0.99717474,0.000004801974,0.000022178006,0.000084025625,0.00019438639,0.000529483,0.001275354,0.00017277776,0.0005104567,0.000003619697],"about_ca_topic_score_codex":0.002129141,"about_ca_topic_score_gemma":0.0038900028,"teacher_disagreement_score":0.002129141,"about_ca_system_score_codex":0.00021714032,"about_ca_system_score_gemma":0.000089306835,"threshold_uncertainty_score":0.0042334795},"labels":[],"label_agreement":null},{"id":"W4388817818","doi":"10.14745/ccdr.v49i10a06f","title":"Fardeau actuel et futur de la maladie de Lyme au Québec en fonction des changements climatiques","year":2023,"lang":"fr","type":"article","venue":"Relevé des maladies transmissibles au Canada","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Centre intégré de santé et de services sociaux de la Montérégie-Centre; Centre intégré de santé et de services sociaux de Chaudière-Appalaches; Centre Intégré de Santé et de Services Sociaux des Laurentides; Université de Montréal; Santé Montérégie; Cegep de Saint Hyacinthe; Université de Sherbrooke; Centre Intégré Universitaire de Santé et de Services Sociaux du Centre-Sud-de-l'Île-de-Montréal; Ouranos; Centre Hospitalier Universitaire de Sherbrooke","funders":"","keywords":"Political science; Geography","score_opus":0.014986373307693686,"score_gpt":0.28037793187533955,"score_spread":0.26539155856764585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388817818","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8769181,0.022066064,0.007000179,0.019671828,0.00041232305,0.00016148781,0.027432483,0.00021859763,0.04611903],"genre_scores_gemma":[0.9803367,0.004825167,0.0012748886,0.0009023144,0.00006970959,0.00005123462,0.003129739,0.000021876936,0.009388322],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99897563,0.00021935928,0.000040799725,0.00017851258,0.0002824685,0.00030322085],"domain_scores_gemma":[0.9962948,0.0004353074,0.00068631984,0.00010673961,0.0018940557,0.000582674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016903639,0.0004059372,0.00037969736,0.0012057235,0.0012625734,0.0020480675,0.0007703284,0.00058361015,0.008939403],"category_scores_gemma":[0.004564716,0.00020222255,0.0006421724,0.0015146183,0.00091249985,0.0007496536,0.0010321528,0.0013101969,0.00066714885],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003776791,0.00008118693,0.90517396,0.000631943,0.00051095424,0.00025366936,0.0019051376,0.0071191904,0.0010394544,0.0041827457,0.0176326,0.06109153],"study_design_scores_gemma":[0.000021136355,0.00013204226,0.96087646,0.00069263467,0.00029465577,0.00014073169,0.0024225109,0.0068102945,0.00048718037,0.00085534144,0.027204689,0.000062419116],"about_ca_topic_score_codex":0.9685649,"about_ca_topic_score_gemma":0.9776809,"teacher_disagreement_score":0.031435072,"about_ca_system_score_codex":0.021328017,"about_ca_system_score_gemma":0.019574627,"threshold_uncertainty_score":0.1547463},"labels":[],"label_agreement":null},{"id":"W4389082783","doi":"10.1086/scj4803129","title":":<i>Plague and Empire in the Early Modern Mediterranean World: The Ottoman Experience, 1348–1600</i>","year":2017,"lang":"en","type":"article","venue":"Sixteenth Century Journal","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Plague (disease); Ottoman empire; Empire; Classics; Ancient history; Mediterranean climate; History; Early modern Europe; Political science; Economic history; Law; Archaeology; Politics","score_opus":0.022363180538016357,"score_gpt":0.3151735833932724,"score_spread":0.29281040285525606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389082783","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.78483653,0.089156486,0.00019750796,0.035385303,0.0024985962,0.000020879497,0.0006206394,0.000027246831,0.08725675],"genre_scores_gemma":[0.9450749,0.023745505,0.00012631743,0.0024285258,0.0009055537,0.000011953833,0.00018610593,0.000017432278,0.027503684],"study_design_codex":"qualitative","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9998858,0.000029476787,0.000008639316,0.000011499303,0.0000151336935,0.000049466307],"domain_scores_gemma":[0.99983156,0.00005315744,0.000046373105,0.000008829873,0.000026990181,0.00003310276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041470097,0.00024066673,0.00012196239,0.00051510165,0.0015424972,0.0019899758,0.00035219055,0.00056284375,0.0058936803],"category_scores_gemma":[0.0006278501,0.00006987044,0.00007994181,0.0013227874,0.003833416,0.0016102269,0.0009884825,0.00065368466,0.00034167545],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00057183014,0.000082161234,0.088742524,0.0011733008,0.00006625246,0.0036341462,0.6736059,0.00018405746,0.0026232176,0.067229316,0.06337032,0.09871691],"study_design_scores_gemma":[0.00001701494,0.0000952369,0.2079263,0.0005911691,0.00003703095,0.0018374446,0.17797469,0.00004012483,0.0005143776,0.002066785,0.60886675,0.000033212473],"about_ca_topic_score_codex":0.18495356,"about_ca_topic_score_gemma":0.35076353,"teacher_disagreement_score":0.18495356,"about_ca_system_score_codex":0.002632022,"about_ca_system_score_gemma":0.001953666,"threshold_uncertainty_score":0.36775404},"labels":[],"label_agreement":null},{"id":"W4389086573","doi":"10.1038/s41467-023-43585-5","title":"Structural and functional insights into the delivery of a bacterial Rhs pore-forming toxin to the membrane","year":2023,"lang":"en","type":"article","venue":"Nature Communications","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Agencia Estatal de Investigación; Medical Research Council; Universitat Jaume I; European Regional Development Fund; European Commission; Euskal Herriko Unibertsitatea; Generalitat Valenciana; Eusko Jaurlaritza; Functional Genomics Center Zurich; Ministerio de Ciencia e Innovación; Diamond Light Source; Canadian Institutes of Health Research; Eidgenössische Technische Hochschule Zürich; Wellcome Trust","keywords":"Microbial toxins; Toxin; Chemistry; Membrane; Pore-forming toxin; Biophysics; Microbiology; Biology; Biochemistry","score_opus":0.0204050951670307,"score_gpt":0.29824565161765604,"score_spread":0.27784055645062533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389086573","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98622596,0.0017554159,0.0068535306,0.00071921817,0.000027031014,0.000009111972,0.00023495223,0.00011254569,0.0040623215],"genre_scores_gemma":[0.994187,0.0010524491,0.0033837135,0.0000919263,0.000008697195,0.0000027358565,0.00018086858,0.0000066590483,0.0010860139],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999732,0.0000034521954,0.0000012615924,0.0000043373757,0.000010001612,0.000007694031],"domain_scores_gemma":[0.99995506,0.000008850357,0.000012124189,0.0000045683205,0.000005981772,0.00001345279],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007994029,0.0002328606,0.000106499836,0.00012733338,0.00023598997,0.00025190605,0.00018581586,0.0004512603,0.0012714553],"category_scores_gemma":[0.000108234875,0.000114693925,0.00020201171,0.00010387303,0.00034737296,0.00040275021,0.0001850598,0.000650244,0.00030150096],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000807481,0.000022210173,0.0009327245,0.000076327284,0.0000073777396,0.00044191675,0.000074027485,0.0018945807,0.9916032,0.002493093,0.00017074641,0.0022031],"study_design_scores_gemma":[0.000026399266,0.00041401613,0.04314489,0.000043265794,0.00004818223,0.0027820405,0.000831637,0.049568616,0.8801335,0.004446027,0.018520914,0.000040510095],"about_ca_topic_score_codex":0.0017080323,"about_ca_topic_score_gemma":0.0013915554,"teacher_disagreement_score":0.0017080323,"about_ca_system_score_codex":0.00037311311,"about_ca_system_score_gemma":0.00025001983,"threshold_uncertainty_score":0.004253447},"labels":[],"label_agreement":null},{"id":"W4389988322","doi":"10.7202/1108326ar","title":"Pathogen Textures","year":2023,"lang":"en","type":"article","venue":"Studies in Canadian Literature","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Ontario College of Art and Design","funders":"","keywords":"Pathogen; Biology; Microbiology","score_opus":0.029002240406098258,"score_gpt":0.35989007976929555,"score_spread":0.33088783936319727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389988322","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.061998773,0.00918079,0.008709889,0.0048846398,0.0016940786,0.00055959244,0.009497126,0.0014395809,0.9020356],"genre_scores_gemma":[0.32369632,0.009585803,0.013588703,0.0034173548,0.0002834128,0.00021483273,0.011658575,0.00047617857,0.6370787],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990036,0.000048005077,0.000029269117,0.00014610795,0.00050417223,0.00026875339],"domain_scores_gemma":[0.99944085,0.000035321824,0.000035709094,0.000050047078,0.0002994614,0.00013861747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045949727,0.0005862444,0.00035851885,0.0015632615,0.0031013668,0.003209017,0.0011184121,0.00093834795,0.08267108],"category_scores_gemma":[0.0011407286,0.00018687626,0.00041971152,0.0016654363,0.0007762541,0.00094239635,0.001600098,0.0010118078,0.025008012],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010392416,0.00036788397,0.016172864,0.0015645913,0.00004471502,0.0018061112,0.002801404,0.0009028054,0.14918783,0.0892001,0.22705315,0.50985926],"study_design_scores_gemma":[0.000020899375,0.00006696646,0.011953249,0.00014515789,0.000026807755,0.00093976007,0.0011105933,0.0003166847,0.010606466,0.0025410438,0.9722401,0.00003224419],"about_ca_topic_score_codex":0.16754152,"about_ca_topic_score_gemma":0.2092861,"teacher_disagreement_score":0.16754152,"about_ca_system_score_codex":0.004145407,"about_ca_system_score_gemma":0.0069941054,"threshold_uncertainty_score":0.33313262},"labels":[],"label_agreement":null},{"id":"W4390498441","doi":"10.1080/00320447.2023.2295177","title":"Under Prairie Skies: The Plants and Native Peoples of the Northern Plains","year":2023,"lang":"en","type":"article","venue":"Plains Anthropologist","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Archaeology; Geography; Native american; Native plant; Introduced species; Ethnology; Ecology; History; Biology","score_opus":0.02114738208471346,"score_gpt":0.3120098988115981,"score_spread":0.2908625167268846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390498441","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8058797,0.051160123,0.0004150103,0.09635005,0.0031039736,0.000028577819,0.00017123813,0.00003265062,0.042858638],"genre_scores_gemma":[0.9257653,0.026592439,0.00038860884,0.015059999,0.0012548467,0.000023856015,0.00007778791,0.000012713892,0.03082446],"study_design_codex":"qualitative","study_design_gemma":"observational","domain_scores_codex":[0.99973696,0.00010220198,0.000007890935,0.00002869806,0.000041693118,0.00008258946],"domain_scores_gemma":[0.99981254,0.00004298606,0.000032958178,0.000009371908,0.000018966255,0.00008320986],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006073733,0.00020957654,0.00021325528,0.00038906292,0.0061125723,0.002051623,0.00030189933,0.0012920051,0.0035469031],"category_scores_gemma":[0.0004444611,0.00018841244,0.000121995545,0.00062241824,0.0059456895,0.0030114772,0.002405242,0.0021452634,0.0002782643],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000115196046,0.000098809716,0.02952887,0.00038564525,0.000023863862,0.002342067,0.8447922,0.00006964647,0.004146362,0.014769822,0.045836974,0.057890613],"study_design_scores_gemma":[0.000012121016,0.00014187692,0.0844562,0.00034307115,0.000017171997,0.0016526987,0.6194487,0.000067152585,0.0003097143,0.0015798794,0.2919314,0.00003996346],"about_ca_topic_score_codex":0.11852243,"about_ca_topic_score_gemma":0.297973,"teacher_disagreement_score":0.11852243,"about_ca_system_score_codex":0.0011995741,"about_ca_system_score_gemma":0.0015801326,"threshold_uncertainty_score":0.23566514},"labels":[],"label_agreement":null},{"id":"W4390663344","doi":"10.4314/aamed.v17i1.3","title":"Profil des prises en charge des envenimations en milieux ruraux : une préférence aux guérisseurs endogènes excepté les cas dus aux abeilles mellifères (Apis mellifera Linné, 1758) dans la Commune de Djidja, République du Bénin","year":2024,"lang":"en","type":"article","venue":"Annales Africaines de Medecine","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministère des Transports","funders":"","keywords":"Context (archaeology); Public health; Socioeconomics; Rural area; Envenomation; Geography; Medicine; Political science; Biology; Sociology; Nursing; Ecology","score_opus":0.02617974212108567,"score_gpt":0.323226840816001,"score_spread":0.29704709869491536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390663344","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99867624,0.00034830035,0.000037018137,0.00017241461,0.000006489761,0.000003062939,0.000019438996,0.000001107659,0.0007358482],"genre_scores_gemma":[0.998914,0.00023589433,0.000051958512,0.00003844246,0.000006410505,0.0000022408144,0.0000149155785,5.5161416e-7,0.0007355887],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99968827,0.00012359578,0.0000140885,0.000042796084,0.000040373947,0.00009092277],"domain_scores_gemma":[0.9993637,0.00013837748,0.00023066511,0.000011514078,0.00010626671,0.00014948567],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034995118,0.00016488768,0.00012273015,0.00042114334,0.0007898377,0.00089106057,0.0002064268,0.0004373363,0.0024517134],"category_scores_gemma":[0.0010890296,0.000109916604,0.000073569936,0.00034840094,0.0005773688,0.00039955307,0.00032420427,0.00026897964,0.00020737688],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019835096,0.00011830044,0.9587704,0.00008549309,0.000023120534,0.0010727609,0.014532079,0.00007117315,0.0017362585,0.0002813986,0.00050344097,0.02260718],"study_design_scores_gemma":[0.0000037397826,0.0002130974,0.9585975,0.0000479175,0.000012201547,0.0012379437,0.036746755,0.00015926093,0.0002512168,0.00007419131,0.0026451482,0.000011115506],"about_ca_topic_score_codex":0.014403872,"about_ca_topic_score_gemma":0.0327112,"teacher_disagreement_score":0.014403872,"about_ca_system_score_codex":0.0007366528,"about_ca_system_score_gemma":0.00048414987,"threshold_uncertainty_score":0.028640091},"labels":[],"label_agreement":null},{"id":"W4391811757","doi":"10.1128/jcm.00822-23","title":"Photo Quiz: Were those hyphae or pseudohyphae in blood culture?","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; Canadian Electricity Association; University of Ottawa","funders":"","keywords":"Hypha; Microbiology; Blood culture; Biology; Pathology; Medicine; Antibiotics","score_opus":0.04653644496715551,"score_gpt":0.415775055728875,"score_spread":0.3692386107617195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391811757","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.18028997,0.017541746,0.025483849,0.19776218,0.030402001,0.0038749133,0.036803722,0.009386325,0.49845544],"genre_scores_gemma":[0.40979728,0.00832391,0.025714144,0.064785734,0.0064065433,0.00056992436,0.0104773315,0.0014134642,0.4725117],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998729,0.000020013747,0.000010399406,0.000020684054,0.000040219296,0.00003578997],"domain_scores_gemma":[0.9996055,0.00010630894,0.000028744846,0.000023819499,0.00015757448,0.000078138975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017508173,0.0006535608,0.000425479,0.0010295847,0.00060858676,0.00057315076,0.0005416529,0.0017660486,0.17670333],"category_scores_gemma":[0.0012683094,0.00026792922,0.00047033455,0.00029645526,0.00018875011,0.00063875783,0.00042091572,0.0012274482,0.027294569],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014680291,0.00048339236,0.011369589,0.00064389856,0.00005327221,0.075155206,0.00024910996,0.0003671081,0.017736215,0.0013473661,0.79905665,0.092070125],"study_design_scores_gemma":[0.00026940144,0.0010547071,0.040263254,0.0012134737,0.00014086303,0.10671776,0.0019699347,0.0036339592,0.017977158,0.004802571,0.8218147,0.00014222166],"about_ca_topic_score_codex":0.003813005,"about_ca_topic_score_gemma":0.00399174,"teacher_disagreement_score":0.17670333,"about_ca_system_score_codex":0.0003461,"about_ca_system_score_gemma":0.00020036772,"threshold_uncertainty_score":0.59113157},"labels":[],"label_agreement":null},{"id":"W4392770882","doi":"10.31542/akya7p48","title":"Predicting the Future of Human-Coyote Interactions in Edmonton Using Differential Equations","year":2024,"lang":"en","type":"article","venue":"MacEwan University Student eJournal","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Differential (mechanical device); Environmental science; Geography; Engineering; Aerospace engineering","score_opus":0.02191636777567295,"score_gpt":0.33461562706561915,"score_spread":0.3126992592899462,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392770882","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8803484,0.00035234622,0.108393796,0.0014280123,0.00006337041,0.00004664076,0.00035165233,0.0001105326,0.008905242],"genre_scores_gemma":[0.98122,0.00024011076,0.010987579,0.00010991677,0.000015699203,0.000038034646,0.00017161937,0.000018362349,0.007198622],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9999175,0.00001988883,0.0000033381345,0.000024864381,0.000013706296,0.000020643023],"domain_scores_gemma":[0.9996505,0.00020603284,0.00006172014,0.0000061084756,0.00004330796,0.000032441574],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000438122,0.00035274265,0.00046094737,0.00044121614,0.00046523637,0.00071516837,0.00054676767,0.0010302401,0.0014209483],"category_scores_gemma":[0.001395598,0.00036903264,0.0004695215,0.00020774342,0.00053775567,0.00056483055,0.0007054785,0.00077233394,0.000107197564],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013143751,0.000010507142,0.008159573,0.000015139896,0.000016258824,0.00012696031,0.000062087725,0.98539436,0.0010371403,0.0033801354,0.00023359752,0.0015510523],"study_design_scores_gemma":[0.000003582682,0.000009560865,0.0025847298,0.000004636415,0.000007722824,0.000014963846,0.00004325467,0.99604,0.00010246698,0.0009159708,0.00026575252,0.000007349055],"about_ca_topic_score_codex":0.16462795,"about_ca_topic_score_gemma":0.11257483,"teacher_disagreement_score":0.83537203,"about_ca_system_score_codex":0.001984822,"about_ca_system_score_gemma":0.0016881517,"threshold_uncertainty_score":0.32733947},"labels":[],"label_agreement":null},{"id":"W4392987688","doi":"10.5040/9798216031550.0006","title":"Amana Colonies","year":2008,"lang":"en","type":"other","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Chemistry; Zoology; Biology","score_opus":0.011110151611748978,"score_gpt":0.27145527798902364,"score_spread":0.26034512637727464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392987688","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.043362584,0.0005292141,0.00042443044,0.0011508397,0.0007574702,0.00023652146,0.0022889758,0.00053971424,0.9507101],"genre_scores_gemma":[0.06563532,0.00050055684,0.0023387577,0.00091334776,0.00012973473,0.00022806316,0.0023674043,0.00018723859,0.9276996],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.999845,0.00001569953,0.0000035937114,0.00003417428,0.00004401514,0.000057505087],"domain_scores_gemma":[0.9997491,0.000015370239,0.000016243062,0.00003117311,0.00007052652,0.00011761915],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022130052,0.00051685376,0.0001765267,0.0013768991,0.0034351023,0.0015961948,0.00084155187,0.00044361094,0.1487548],"category_scores_gemma":[0.00037084502,0.00026217656,0.00020605966,0.0008818692,0.00038915063,0.0005207076,0.0015636694,0.0011862919,0.03127047],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028594202,0.00046197203,0.018160412,0.0002425089,0.000024460378,0.0013392608,0.0037125612,0.00006130132,0.0065728542,0.023542035,0.62563956,0.31995717],"study_design_scores_gemma":[0.000013606928,0.000025052044,0.025117368,0.000043891625,0.000004114938,0.00028851657,0.0017049423,0.000040674382,0.00040384976,0.0004106296,0.9719415,0.000005992832],"about_ca_topic_score_codex":0.014848017,"about_ca_topic_score_gemma":0.103933856,"teacher_disagreement_score":0.1487548,"about_ca_system_score_codex":0.0011080047,"about_ca_system_score_gemma":0.00093201414,"threshold_uncertainty_score":0.4976344},"labels":[],"label_agreement":null},{"id":"W4393161969","doi":"","title":"Enterocolitis caused by Yersinia enterocolitica. A case report","year":2008,"lang":"en","type":"article","venue":"DOAJ (DOAJ: Directory of Open Access Journals)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Yersinia enterocolitica; Enterocolitis; Microbiology; Yersinia; Medicine; Biology; Internal medicine; Bacteria; Genetics","score_opus":0.17264096781274807,"score_gpt":0.5362193635642676,"score_spread":0.3635783957515195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393161969","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91234815,0.029620368,0.004712476,0.008814128,0.0024913475,0.0007022811,0.0009693586,0.00059789524,0.039743967],"genre_scores_gemma":[0.98370427,0.0059280326,0.0016658811,0.0022293548,0.003255149,0.000108516135,0.00026751147,0.000049263104,0.0027920008],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9983352,0.0001801442,0.00018083029,0.00042080565,0.00021351398,0.0006696195],"domain_scores_gemma":[0.9971144,0.00065565103,0.0006503633,0.00036251536,0.00014175568,0.0010752362],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009113356,0.0072578085,0.0025032642,0.0062579555,0.006501232,0.0035219423,0.0020937927,0.01047423,0.0039841128],"category_scores_gemma":[0.004721698,0.0037854144,0.0023121422,0.004281346,0.003946269,0.0057323067,0.0040921527,0.007175761,0.0025050177],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035956677,0.00007206112,0.002539289,0.00003729978,0.000008610793,0.9959138,0.00012861521,0.000030793468,0.0002642269,0.000106044485,0.0002610838,0.00060225604],"study_design_scores_gemma":[0.000018077557,0.00006923601,0.0026094979,0.00001572359,0.000010872027,0.9965405,0.00009271165,0.00006684103,0.00009605374,0.00006143249,0.00040791978,0.000011201983],"about_ca_topic_score_codex":0.003803085,"about_ca_topic_score_gemma":0.003616838,"teacher_disagreement_score":0.01047423,"about_ca_system_score_codex":0.002919612,"about_ca_system_score_gemma":0.0015535688,"threshold_uncertainty_score":0.021183372},"labels":[],"label_agreement":null},{"id":"W4393277846","doi":"10.1038/s41467-024-47047-4","title":"Anaerobic fungi in the tortoise alimentary tract illuminate early stages of host-fungal symbiosis and Neocallimastigomycota evolution","year":2024,"lang":"en","type":"article","venue":"Nature Communications","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Scarborough Hospital; University of Toronto","funders":"Oklahoma State University; National Science Foundation","keywords":"Biology; Symbiosis; Phylogenetics; Phylogenetic tree; Evolutionary biology; Lineage (genetic); Gene; Zoology; Genetics; Bacteria","score_opus":0.011937141430832358,"score_gpt":0.2987120081899414,"score_spread":0.28677486675910907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393277846","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99550855,0.0019512969,0.0010233942,0.00004579537,0.0000056983445,0.000007659395,0.00055195554,0.000028268272,0.0008773157],"genre_scores_gemma":[0.99534214,0.000891265,0.0022496562,0.00005015788,0.000012082827,0.000007725969,0.00092791027,0.00000822331,0.0005108405],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99980146,0.000017562184,0.000013410108,0.00009181843,0.00003126799,0.000044490942],"domain_scores_gemma":[0.9997794,0.000028290033,0.00009250636,0.000017543116,0.000032294065,0.00005001731],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002194567,0.000400328,0.00022903126,0.0008189178,0.0004985259,0.00074126886,0.00015021965,0.0004168788,0.0008791805],"category_scores_gemma":[0.00027216267,0.00015957393,0.00022529172,0.0006446025,0.00038868384,0.00052001985,0.00061428896,0.00037390948,0.00029885946],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029929314,0.00004181261,0.2362378,0.0003464482,0.000055367043,0.00038520005,0.0012394689,0.00025485968,0.73412555,0.00034279423,0.00016568718,0.026505679],"study_design_scores_gemma":[0.0000037060706,0.00014546479,0.9800362,0.00004702318,0.000046541165,0.00074775564,0.00078842486,0.00071266503,0.013384095,0.00023002543,0.0038421887,0.000015892518],"about_ca_topic_score_codex":0.0017211305,"about_ca_topic_score_gemma":0.004079089,"teacher_disagreement_score":0.0017211305,"about_ca_system_score_codex":0.00021455095,"about_ca_system_score_gemma":0.00016799984,"threshold_uncertainty_score":0.0034222603},"labels":[],"label_agreement":null},{"id":"W4394203573","doi":"10.6084/m9.figshare.16829375","title":"Additional file 1 of Genomic approaches to trace the history of human brain evolution with an emerging opportunity for transposon profiling of ancient humans","year":2021,"lang":"en","type":"dataset","venue":"Figshare","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Profiling (computer programming); Transposable element; TRACE (psycholinguistics); Computational biology; Ancient DNA; Biology; Computer science; Data science; Genetics; Genome; Gene; Sociology; Operating system; Demography; Philosophy","score_opus":0.14000356001742492,"score_gpt":0.29831278097791775,"score_spread":0.15830922096049282,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394203573","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013419824,0.000029620544,0.00027244675,0.00008863536,0.000028511971,0.00008018258,0.9985245,0.00018808446,0.00065389497],"genre_scores_gemma":[0.005987207,0.00028824437,0.0062576723,0.0008957514,0.00013906097,0.0026641854,0.974258,0.0011952606,0.0083146505],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990914,0.0001386458,0.00019348133,0.00025693368,0.00018972496,0.0001298342],"domain_scores_gemma":[0.9783967,0.016684366,0.0011046021,0.0011713252,0.0021083986,0.00053456245],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0020078125,0.0013257242,0.0013518552,0.0032332176,0.0012543824,0.0026004764,0.0020053315,0.0015881321,0.8645515],"category_scores_gemma":[0.030055003,0.0007443981,0.0010564115,0.0052367523,0.00048292524,0.0025396564,0.0015514333,0.0013880666,0.16124217],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004323594,0.00007684278,0.0023950578,0.0064357133,0.000070028495,0.00016694244,0.00013060382,0.0003706396,0.00034213322,0.0012024756,0.97779524,0.010582139],"study_design_scores_gemma":[0.0049116393,0.00027444554,0.026269367,0.0064775976,0.00023871957,0.0009330387,0.0007923798,0.0012094483,0.0012113887,0.01343859,0.94404763,0.00019580919],"about_ca_topic_score_codex":0.008205331,"about_ca_topic_score_gemma":0.014293525,"teacher_disagreement_score":0.8645515,"about_ca_system_score_codex":0.0010811677,"about_ca_system_score_gemma":0.0028325296,"threshold_uncertainty_score":0.19320089},"labels":[],"label_agreement":null},{"id":"W4396235032","doi":"10.2196/52318","title":"Surveillance Metrics and History of the COVID-19 Pandemic in Central Asia: Updated Epidemiological Assessment","year":2024,"lang":"en","type":"article","venue":"JMIR Public Health and Surveillance","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Pandemic; Epidemiology; Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Central asia; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Geography; Environmental health; Virology; Medicine; Outbreak; Disease; Infectious disease (medical specialty); Pathology","score_opus":0.06675335789882297,"score_gpt":0.37693463315933545,"score_spread":0.3101812752605125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396235032","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95638865,0.0062926817,0.00811139,0.0019852857,0.00015412593,0.00019249966,0.015634047,0.0002511907,0.0109901],"genre_scores_gemma":[0.9859518,0.0013066365,0.005396068,0.00015918577,0.00010186392,0.000103492515,0.006675152,0.00002554306,0.0002801564],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981232,0.0005003205,0.00028879195,0.000422429,0.0004715058,0.00019373861],"domain_scores_gemma":[0.98409927,0.0029285233,0.005908338,0.0011870145,0.005188915,0.0006878405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0066932915,0.00078785367,0.00045076612,0.0073305643,0.00040835113,0.002014159,0.0011004333,0.00041816977,0.000994556],"category_scores_gemma":[0.019068511,0.00027244564,0.0005639946,0.007935066,0.00058255455,0.003097399,0.0016612255,0.00078143424,0.0001638714],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000063613246,0.000022797283,0.96865606,0.00013708681,0.00013840015,0.00004934692,0.0007160077,0.0021158045,0.00013715951,0.0005120374,0.0018876476,0.025564024],"study_design_scores_gemma":[0.000005993955,0.00018379472,0.98092884,0.0003588661,0.00012524176,0.00027040511,0.0019303571,0.0074330107,0.0003566037,0.000711202,0.007653361,0.000042332693],"about_ca_topic_score_codex":0.025687173,"about_ca_topic_score_gemma":0.016447667,"teacher_disagreement_score":0.025687173,"about_ca_system_score_codex":0.001990993,"about_ca_system_score_gemma":0.002115357,"threshold_uncertainty_score":0.05107528},"labels":[],"label_agreement":null},{"id":"W4399040273","doi":"10.3917/rdr.071.0086","title":"La tortue-lièvre , une aventure","year":2024,"lang":"fr","type":"article","venue":"La Revue des revues","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Business","score_opus":0.017709824716318733,"score_gpt":0.30678420233984793,"score_spread":0.2890743776235292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399040273","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.036398098,0.44871616,0.017652245,0.06990227,0.013873282,0.0001749313,0.0003952486,0.0003647843,0.41252297],"genre_scores_gemma":[0.4714799,0.15324013,0.008541159,0.014738735,0.0034641146,0.00024699347,0.00032674044,0.00033194537,0.34763026],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9961029,0.0013055861,0.00018537273,0.0009812157,0.0010054157,0.00041949592],"domain_scores_gemma":[0.9966449,0.0014576348,0.00043479996,0.00041059504,0.00076102425,0.00029095425],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004207569,0.0011147722,0.0005946219,0.0023175285,0.0041092443,0.009007901,0.0011026694,0.003880226,0.009979372],"category_scores_gemma":[0.00590127,0.00048429018,0.00099152,0.0018359727,0.016478729,0.0072967205,0.0030686345,0.0052612564,0.0020638048],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025773572,0.00005946987,0.0017034488,0.0010131059,0.00005888351,0.00040951895,0.015601314,0.00028342928,0.002309945,0.84097517,0.03637623,0.10095174],"study_design_scores_gemma":[0.0000110614155,0.000077826975,0.0012627047,0.0003353724,0.00001318498,0.0002171624,0.0017143567,0.00003825245,0.0011228004,0.012111265,0.9830731,0.00002284583],"about_ca_topic_score_codex":0.025705477,"about_ca_topic_score_gemma":0.02474438,"teacher_disagreement_score":0.025705477,"about_ca_system_score_codex":0.013272926,"about_ca_system_score_gemma":0.008547357,"threshold_uncertainty_score":0.09630227},"labels":[],"label_agreement":null},{"id":"W4400491896","doi":"10.1038/s41586-024-07651-2","title":"Repeated plague infections across six generations of Neolithic Farmers","year":2024,"lang":"en","type":"article","venue":"Nature","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Lundbeckfonden; Wellcome Trust","keywords":"Plague (disease); Biology; Geography; Archaeology","score_opus":0.008903405913603188,"score_gpt":0.3313852413193289,"score_spread":0.3224818354057257,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400491896","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9997751,0.000022273343,0.000068010784,0.000004570666,4.8976756e-7,0.000001611355,0.000046205914,0.0000015037037,0.000080349644],"genre_scores_gemma":[0.99959296,0.000032228483,0.00010571486,0.000008817711,0.0000010740738,0.0000031254244,0.00010092357,9.550258e-7,0.000154153],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998884,0.000018640052,0.0000049213822,0.000044326756,0.000016392458,0.000027281927],"domain_scores_gemma":[0.9997702,0.000051871837,0.00007865671,0.000026876694,0.000031323394,0.000041070798],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014021674,0.00015229506,0.0001600013,0.00064683886,0.00072634564,0.00043799612,0.00018269206,0.00025882834,0.0011270359],"category_scores_gemma":[0.00041958332,0.00015529554,0.00012566098,0.0005174601,0.00044584463,0.00017477217,0.00049439917,0.00025393962,0.00017877056],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019904369,0.000043035954,0.97707343,0.00001448986,0.00006216533,0.00084994134,0.0028369422,0.00021620952,0.009935106,0.00008693726,0.000119750286,0.008562976],"study_design_scores_gemma":[0.0000026215928,0.000045794197,0.9977223,0.0000040270947,0.000011879986,0.00041953105,0.00093498366,0.00022853097,0.00033688056,0.0000639344,0.00022574232,0.0000038222015],"about_ca_topic_score_codex":0.005993216,"about_ca_topic_score_gemma":0.012661622,"teacher_disagreement_score":0.005993216,"about_ca_system_score_codex":0.000275615,"about_ca_system_score_gemma":0.000102367674,"threshold_uncertainty_score":0.011916637},"labels":[],"label_agreement":null},{"id":"W4402063075","doi":"10.4324/9781003531425-25","title":"Northern America","year":2024,"lang":"en","type":"book-chapter","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Geography","score_opus":0.01150409462988845,"score_gpt":0.2619719568695083,"score_spread":0.25046786223961987,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402063075","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00039762995,0.007752241,0.00049038394,0.0011617907,0.0013025705,0.000016529499,0.00028605654,0.00023488553,0.98835796],"genre_scores_gemma":[0.0026625302,0.0052029705,0.0007154381,0.00079217314,0.0002641676,0.00002134867,0.0003382073,0.00012599457,0.98987716],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99983025,0.0000215528,0.0000055520295,0.000051542287,0.00006205114,0.00002890786],"domain_scores_gemma":[0.9999068,0.0000138557625,0.0000067066844,0.00000990493,0.000040064195,0.00002269935],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014493962,0.0009214419,0.00034897367,0.0007292576,0.0021291776,0.003282064,0.000593838,0.00087312516,0.20823465],"category_scores_gemma":[0.00029059936,0.00021099085,0.00025982526,0.00088507804,0.0007110582,0.0023734898,0.0016562208,0.0014732876,0.09093313],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024572844,0.000020033693,0.00021141414,0.00022181887,0.0000033509461,0.00022959008,0.0011741858,0.00011016114,0.00072504283,0.08116407,0.7601987,0.155917],"study_design_scores_gemma":[4.847577e-7,0.0000010744087,0.0000490961,0.000027185264,4.3867115e-7,0.000047723504,0.000047839014,0.000006238762,0.000025113693,0.0007801957,0.99901354,0.0000010114741],"about_ca_topic_score_codex":0.014589911,"about_ca_topic_score_gemma":0.04727113,"teacher_disagreement_score":0.20823465,"about_ca_system_score_codex":0.00240019,"about_ca_system_score_gemma":0.0017150637,"threshold_uncertainty_score":0.6966143},"labels":[],"label_agreement":null},{"id":"W4402380385","doi":"10.3389/fvets.2024.1452237","title":"Molecular identification of Baylisascaris melis (Gedoelst, 1920) from the Eurasian badger (Meles meles) and ascarids from other wild carnivores in Kazakhstan","year":2024,"lang":"en","type":"article","venue":"Frontiers in Veterinary Science","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"ArcelorMittal (Canada)","funders":"","keywords":"Meles; Badger; Mustelidae; Zoology; Carnivore; Identification (biology); Biology; Geography; Ecology; Predation","score_opus":0.009511212667389015,"score_gpt":0.2756474821858105,"score_spread":0.26613626951842145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402380385","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99956936,0.00010609707,0.000047035857,0.000007603128,0.0000025212628,0.0000054863326,0.000081078295,0.0000021679868,0.00017867982],"genre_scores_gemma":[0.99908936,0.00009607606,0.00028277238,0.000019440584,0.0000023137168,0.0000050379967,0.0003491801,5.710898e-7,0.0001553011],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99986374,0.000018302393,0.00001996398,0.000040310046,0.000025646365,0.000032059146],"domain_scores_gemma":[0.9998342,0.000019948488,0.00007247468,0.000009674762,0.00003061761,0.00003304557],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018467361,0.00027286285,0.00015433248,0.0008700909,0.0004735464,0.00040614174,0.0001378706,0.00021699503,0.00047640371],"category_scores_gemma":[0.00019849266,0.00011182997,0.00014109307,0.00043443934,0.000367612,0.00014235433,0.00024536107,0.00011385023,0.00011684533],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001292921,0.000048201833,0.8950792,0.00007411985,0.00003343231,0.0005948699,0.0013770787,0.000071880684,0.09452988,0.000044078744,0.000075921926,0.007941961],"study_design_scores_gemma":[0.0000032810954,0.000094976196,0.99591666,0.000010694333,0.000015652693,0.0006427024,0.0009937311,0.00006529667,0.0018193375,0.00000989635,0.0004258682,0.0000018986192],"about_ca_topic_score_codex":0.0058199153,"about_ca_topic_score_gemma":0.013654485,"teacher_disagreement_score":0.0058199153,"about_ca_system_score_codex":0.0002406858,"about_ca_system_score_gemma":0.000244068,"threshold_uncertainty_score":0.011572063},"labels":[],"label_agreement":null},{"id":"W4402693485","doi":"10.52707/1081-1710-49.2.r61","title":"Comparison of flea diversity in the burrows of Richardson's ground squirrels (Urocitellus richardsonii) in urban and rural sites in central Saskatchewan, Canada","year":2024,"lang":"en","type":"article","venue":"Journal of Vector Ecology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Flea; Biology; Ecology; Diversity (politics); Zoology; Anthropology","score_opus":0.01789679034780159,"score_gpt":0.2949135387181671,"score_spread":0.2770167483703655,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402693485","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999159,0.000060251663,0.000019465258,0.000010664911,7.9332887e-7,0.000005048906,0.00044374904,0.0000011323884,0.00029997053],"genre_scores_gemma":[0.9990132,0.00006789237,0.00004760507,0.0000132413425,5.2032397e-7,0.0000036814686,0.00042974492,0.0000010260203,0.00042317394],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997981,0.000023219975,0.000013846939,0.00005312186,0.000034611123,0.000077208155],"domain_scores_gemma":[0.9995098,0.000035575995,0.0001164247,0.000015784975,0.00016676384,0.00015564894],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019585203,0.00020302992,0.0001663662,0.0014401136,0.0007432672,0.00048085907,0.0003923547,0.0002545903,0.0010697326],"category_scores_gemma":[0.0003897701,0.00019088395,0.00020622261,0.001163193,0.0005167287,0.00020573064,0.00035124886,0.00018062585,0.00022332839],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000089870395,0.000018229586,0.9943773,0.000014679965,0.00004659005,0.00009586188,0.0008748683,0.000066230445,0.002664179,0.000036703677,0.00015023655,0.0015653457],"study_design_scores_gemma":[9.563682e-7,0.0000115269795,0.9992059,0.0000029345413,0.0000036068532,0.00002813244,0.00062034134,0.000030399655,0.000029381355,0.0000030880512,0.000062104424,0.0000016701467],"about_ca_topic_score_codex":0.8411596,"about_ca_topic_score_gemma":0.96184266,"teacher_disagreement_score":0.15884042,"about_ca_system_score_codex":0.0033073763,"about_ca_system_score_gemma":0.0017519764,"threshold_uncertainty_score":0.3195517},"labels":[],"label_agreement":null},{"id":"W4403658171","doi":"10.1101/2024.10.19.619215","title":"Spatial and temporal occurrences of prairie moose across an urban to rural gradient in Saskatoon, Canada","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Geography; Physical geography; Environmental science","score_opus":0.010583788340603575,"score_gpt":0.25964438508000126,"score_spread":0.24906059673939768,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403658171","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971179,0.000102255646,0.00009948751,0.00003528526,0.000003002017,0.00001606526,0.001784921,0.000007796039,0.00083338044],"genre_scores_gemma":[0.99659985,0.0001917577,0.00030280536,0.000034670473,0.0000016574951,0.000025867175,0.0014331348,0.0000045381616,0.0014057136],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997905,0.000025529162,0.000014029628,0.00006358473,0.000044387176,0.00006202821],"domain_scores_gemma":[0.9991769,0.00008215666,0.0001473171,0.000029996034,0.00037686713,0.00018668038],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020504383,0.00026623203,0.00022185297,0.0010668117,0.00093665224,0.0007542371,0.00059133343,0.00021768946,0.0017175605],"category_scores_gemma":[0.00048191307,0.00017624348,0.00023101212,0.0022764164,0.000405265,0.00021183465,0.00056355394,0.00023319098,0.0002829201],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052614003,0.000019625459,0.9925817,0.000032248812,0.000051809708,0.00014061116,0.00093417265,0.00028391747,0.0012438552,0.000054047407,0.0006781343,0.0039271815],"study_design_scores_gemma":[0.0000019001719,0.000009101874,0.9974139,0.000012419401,0.000009358988,0.00003575125,0.0015661058,0.00040288857,0.000057580884,0.000010453528,0.0004746325,0.0000057898856],"about_ca_topic_score_codex":0.9526226,"about_ca_topic_score_gemma":0.98961884,"teacher_disagreement_score":0.047377408,"about_ca_system_score_codex":0.005004421,"about_ca_system_score_gemma":0.0050462903,"threshold_uncertainty_score":0.095312774},"labels":[],"label_agreement":null},{"id":"W4404366661","doi":"10.1038/s41586-026-10540-5","title":"Lethal Plague Outbreaks in Lake Baikal Hunter–gatherers 5500 Years Ago","year":2024,"lang":"en","type":"preprint","venue":"Nature","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Saskatchewan","funders":"Novo Nordisk; Social Sciences and Humanities Research Council of Canada; University of Alberta; National Research Foundation; Riksbankens Jubileumsfond; Danmarks Grundforskningsfond; H. Lundbeck A/S; Lundbeckfonden; Wellcome Trust","keywords":"Yersinia pestis; Plague (disease); Outbreak; Prehistory; Geography; Population; Biology; Demography; Virology; Virulence; Archaeology; Genetics","score_opus":0.008288685142826331,"score_gpt":0.3026295989465488,"score_spread":0.29434091380372246,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404366661","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995943,0.00005428493,0.000026748852,0.000028527005,0.0000029343298,0.0000030012095,0.000102040736,0.0000039145543,0.00018418167],"genre_scores_gemma":[0.999393,0.00005932064,0.00006263101,0.00004066652,0.0000066005296,0.000005906748,0.0001723318,0.0000015516334,0.000258012],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99979943,0.000023009177,0.000014562115,0.000057156103,0.000033402637,0.00007252008],"domain_scores_gemma":[0.9996314,0.00003415082,0.00012478624,0.00002021612,0.00005462425,0.00013491849],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023925329,0.00026809942,0.000291858,0.0010923129,0.0018762811,0.00058960204,0.00038850363,0.0007235283,0.0024495265],"category_scores_gemma":[0.0005196131,0.0002586283,0.00022434599,0.00072773965,0.00048502427,0.00047687805,0.0009613764,0.00051465357,0.0003482601],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013662304,0.00006275278,0.9864552,0.000022788561,0.00004577172,0.0010127076,0.0033841212,0.000046052646,0.00605897,0.00003342687,0.00031195435,0.002429605],"study_design_scores_gemma":[0.0000022433028,0.000030593368,0.9986091,0.000004022115,0.0000067495157,0.00020918541,0.0008534724,0.00004695779,0.00006685821,0.000010345947,0.00015616097,0.000004382416],"about_ca_topic_score_codex":0.06726967,"about_ca_topic_score_gemma":0.10201077,"teacher_disagreement_score":0.06726967,"about_ca_system_score_codex":0.0014080905,"about_ca_system_score_gemma":0.00053512777,"threshold_uncertainty_score":0.13375628},"labels":[],"label_agreement":null},{"id":"W4406202374","doi":"10.29173/bluejay6397","title":"First Confirmed Record of Pygmy Nuthatch in Saskatchewan","year":2024,"lang":"en","type":"article","venue":"Blue Jay","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"University of Regina","funders":"","keywords":"Geography; Biology; Zoology","score_opus":0.012508218517005705,"score_gpt":0.28095391943069026,"score_spread":0.2684457009136845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406202374","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98379624,0.00040051294,0.00038065927,0.0002660316,0.00006701712,0.00005884899,0.0014723035,0.00002063061,0.013537831],"genre_scores_gemma":[0.9877418,0.00051133276,0.00066702673,0.0003767077,0.000015340158,0.00002270586,0.00066069135,0.000006968807,0.009997371],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.9997136,0.000028780983,0.000015207587,0.00007456048,0.00006535318,0.00010245889],"domain_scores_gemma":[0.99867105,0.00012800485,0.00019156869,0.0001330106,0.0005753213,0.00030106356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002826389,0.00042634926,0.0002899783,0.0012970411,0.003113056,0.0006205193,0.0009374276,0.0008258003,0.0046267565],"category_scores_gemma":[0.00063195947,0.00036298297,0.00016625455,0.001569274,0.0012494648,0.0004926773,0.001186488,0.0008961637,0.00083216385],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004825255,0.00018153423,0.9005163,0.00020294507,0.00015767501,0.018661583,0.012571751,0.00019837984,0.031726833,0.0013722826,0.0041080685,0.029820137],"study_design_scores_gemma":[0.000014004465,0.00022377203,0.96026534,0.00009849431,0.00005237927,0.0036192934,0.009439732,0.00012525103,0.0031557414,0.00017773667,0.022799267,0.000028917808],"about_ca_topic_score_codex":0.46753144,"about_ca_topic_score_gemma":0.81252927,"teacher_disagreement_score":0.53246856,"about_ca_system_score_codex":0.0025813438,"about_ca_system_score_gemma":0.003836815,"threshold_uncertainty_score":0.9296202},"labels":[],"label_agreement":null},{"id":"W4406328422","doi":"10.3390/vaccines13010066","title":"Live Plague Vaccine Development: Past, Present, and Future","year":2025,"lang":"en","type":"review","venue":"Vaccines","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Russian Science Foundation; Government of Canada; Canadian Food Inspection Agency","keywords":"Plague (disease); Reactogenicity; Immunogenicity; Vaccination; Biology; Virology; Immune system; Attenuated vaccine; Immunology; Medicine; Virulence; Gene; Genetics","score_opus":0.016851034711182666,"score_gpt":0.31878623478873525,"score_spread":0.3019352000775526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406328422","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009798616,0.99820495,0.00012033289,0.00074685016,0.00030872272,0.0000023131286,0.000009643441,0.00000522187,0.00050401094],"genre_scores_gemma":[0.00050761417,0.998548,0.00016740177,0.00031952307,0.00021092658,0.00000430133,0.000014841225,0.0000012850483,0.00022607807],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997478,0.000055499542,0.00003324494,0.00004736817,0.000077502904,0.000038627604],"domain_scores_gemma":[0.999278,0.00036906032,0.00007138208,0.000021122405,0.00017153677,0.00008892746],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013673804,0.0007120625,0.0010916756,0.00178773,0.00030093838,0.0013017482,0.0010074428,0.0015878546,0.0026829268],"category_scores_gemma":[0.0013830457,0.0003273436,0.00045365337,0.0019220536,0.00075451785,0.002566155,0.00080339925,0.002023787,0.0013334189],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000114407274,0.00007809209,0.00019889929,0.016699653,0.00006409483,0.00017773702,0.00009938617,0.00048601514,0.0019632536,0.008005378,0.03545274,0.9366603],"study_design_scores_gemma":[0.0000149591715,0.000119870805,0.0004294925,0.0034322508,0.00006217594,0.0005482567,0.000071535746,0.00009107322,0.00037575592,0.0034381151,0.9914004,0.000016131064],"about_ca_topic_score_codex":0.0008753442,"about_ca_topic_score_gemma":0.0014527218,"teacher_disagreement_score":0.0026829268,"about_ca_system_score_codex":0.0007953395,"about_ca_system_score_gemma":0.0016426258,"threshold_uncertainty_score":0.008975267},"labels":[],"label_agreement":null},{"id":"W4406365154","doi":"10.4269/ajtmh.24-0255","title":"Revisiting the Relationship between Weather and Interannual Variation in Human Plague Cases in the Southwestern United States","year":2025,"lang":"en","type":"article","venue":"American Journal of Tropical Medicine and Hygiene","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Centers for Disease Control and Prevention; National Oceanic and Atmospheric Administration; National Institutes of Health","keywords":"Plague (disease); Precipitation; Climatology; Quarter (Canadian coin); Geography; Zoonosis; Environmental science; Demography; Meteorology; Veterinary medicine; Archaeology; Geology; Medicine","score_opus":0.02795383226779497,"score_gpt":0.343453234533033,"score_spread":0.31549940226523804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406365154","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999498,0.000050112172,0.0001273319,0.00006518846,0.000003944726,0.0000016187347,0.00014094009,0.000005039793,0.00010774372],"genre_scores_gemma":[0.99961567,0.000026305146,0.000086834676,0.00001723323,0.000003924244,0.0000016577739,0.00020519113,0.0000014504786,0.00004166596],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996532,0.0001483639,0.000024561554,0.00008870001,0.00004193102,0.00004323953],"domain_scores_gemma":[0.99857175,0.0006376955,0.00036562092,0.0001524113,0.00016485013,0.0001077101],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011627271,0.00014877974,0.00018281944,0.00040991235,0.00023345172,0.00051272416,0.00031763111,0.0002996749,0.0006744463],"category_scores_gemma":[0.0033136602,0.0001545737,0.0002270624,0.00054912316,0.00022752793,0.00029037613,0.00026070466,0.00035068524,0.000072849194],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003968432,0.000027419774,0.9963167,0.0000031047996,0.000044294502,0.00003466478,0.00007226449,0.001331353,0.00019300381,0.000024491696,0.0001536706,0.0017593354],"study_design_scores_gemma":[0.000002668686,0.000026043579,0.9915455,0.00000409529,0.000016815206,0.000044262255,0.00024470544,0.0078051835,0.00008389454,0.00003756636,0.00018570248,0.0000034780944],"about_ca_topic_score_codex":0.063049816,"about_ca_topic_score_gemma":0.0855365,"teacher_disagreement_score":0.063049816,"about_ca_system_score_codex":0.0005511926,"about_ca_system_score_gemma":0.00044004442,"threshold_uncertainty_score":0.12536567},"labels":[],"label_agreement":null},{"id":"W4406414921","doi":"10.1016/s1155-1976(20)30004-8","title":"10.1016/s1155-1976(20)30004-8","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine","score_opus":0.005226514068878289,"score_gpt":0.2080558499269551,"score_spread":0.20282933585807683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406414921","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00042410276,0.00067020074,0.00072135153,0.0003825089,0.00055872306,0.00015029404,0.0009810829,0.0010636527,0.9950481],"genre_scores_gemma":[0.00041014672,0.00027621715,0.00048380104,0.00025200975,0.0001003248,0.00008491766,0.0005209189,0.0001582652,0.9977133],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992441,0.000042465068,0.000068462214,0.00027752775,0.00021796724,0.00014941861],"domain_scores_gemma":[0.9978801,0.00042764476,0.00010854737,0.00029349187,0.00045413448,0.0008360909],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.001365634,0.0043142517,0.0026257131,0.0037409074,0.0028488,0.0041821944,0.004943257,0.0072941966,0.9911957],"category_scores_gemma":[0.0014371031,0.0014231286,0.0026047793,0.003150329,0.0026298973,0.0058803163,0.003540358,0.003963983,0.9943045],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00058655615,0.00037254955,0.0007640011,0.0011711462,0.00006692501,0.0003165922,0.00011651698,0.00049042125,0.0034791455,0.0072081382,0.36870807,0.6167198],"study_design_scores_gemma":[0.00008941005,0.00013650721,0.0006361208,0.00035222783,0.000016438573,0.00040819438,0.000097076554,0.00016708045,0.0003990208,0.0005853957,0.997081,0.000031358984],"about_ca_topic_score_codex":0.0054573175,"about_ca_topic_score_gemma":0.0043515367,"teacher_disagreement_score":0.008804321,"about_ca_system_score_codex":0.0015845508,"about_ca_system_score_gemma":0.0013026388,"threshold_uncertainty_score":0.012558222},"labels":[],"label_agreement":null},{"id":"W4406469629","doi":"10.1016/s0000-0000(07)45708-4","title":"10.1016/s0000-0000(07)45708-4","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine","score_opus":0.005390211910885929,"score_gpt":0.20880550255990388,"score_spread":0.20341529064901795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406469629","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00066458515,0.0005100724,0.0008871815,0.0009258248,0.0005255938,0.00017064705,0.0011328675,0.0014533786,0.99372995],"genre_scores_gemma":[0.0008021656,0.00014608848,0.00054153183,0.00027277984,0.00010268536,0.000079252226,0.00059741706,0.00017815977,0.9972799],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99934536,0.00004845125,0.00004903519,0.00020540597,0.00016883205,0.00018293507],"domain_scores_gemma":[0.9967263,0.0005023362,0.00019498615,0.000313182,0.0005710759,0.0016922065],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.001292594,0.0024748035,0.0017593162,0.0028146387,0.0020548012,0.0030889635,0.003154408,0.005231278,0.9890048],"category_scores_gemma":[0.0018463176,0.0009427534,0.0014333766,0.0021801766,0.0020413722,0.0036533768,0.0037154707,0.0023933914,0.9935947],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004104507,0.00026267592,0.0012304365,0.00045375768,0.000034492205,0.00024902073,0.00010262237,0.00036977523,0.0022625688,0.005053247,0.32111773,0.6684533],"study_design_scores_gemma":[0.000077035475,0.00013393622,0.0012506054,0.00031001595,0.000010525097,0.0003983973,0.000095316725,0.00024345341,0.0003142524,0.00077656296,0.9963649,0.000025151163],"about_ca_topic_score_codex":0.0022935553,"about_ca_topic_score_gemma":0.001786942,"teacher_disagreement_score":0.010995209,"about_ca_system_score_codex":0.0011449778,"about_ca_system_score_gemma":0.0010989911,"threshold_uncertainty_score":0.015683353},"labels":[],"label_agreement":null},{"id":"W4406474212","doi":"10.1016/s1293-2973(01)00163-8","title":"10.1016/s1293-2973(01)00163-8","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Ophthalmology; Medicine","score_opus":0.005443970299154037,"score_gpt":0.21028917111929432,"score_spread":0.2048452008201403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406474212","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00050550164,0.0005775323,0.00094059797,0.0005983956,0.0005201881,0.0001707593,0.00084190036,0.0010296215,0.9948154],"genre_scores_gemma":[0.0005060456,0.0002279778,0.00046988868,0.0002932213,0.00011413853,0.000086433785,0.0004525724,0.0001752017,0.9976745],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99921584,0.000048350255,0.000074623196,0.00028225716,0.0002083599,0.00017059264],"domain_scores_gemma":[0.99704945,0.00063908444,0.0001932014,0.00031766552,0.0005804519,0.0012201286],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0015062074,0.003676664,0.0023445073,0.0031375505,0.0027033787,0.0043795183,0.004513596,0.007805845,0.9904591],"category_scores_gemma":[0.0018903707,0.001329489,0.002087266,0.0023918515,0.0023494957,0.006378135,0.0037797254,0.003681962,0.9935988],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005187967,0.00035882558,0.0009242181,0.0007981475,0.0000480546,0.00032631846,0.000115327566,0.0005035044,0.0027300953,0.0056301984,0.34887746,0.6391691],"study_design_scores_gemma":[0.000086034095,0.00016127687,0.00082428317,0.0004176252,0.000014495345,0.00047284158,0.00012246444,0.00021191318,0.00037449982,0.0007606953,0.99652195,0.0000318732],"about_ca_topic_score_codex":0.0038646779,"about_ca_topic_score_gemma":0.003529189,"teacher_disagreement_score":0.0095409155,"about_ca_system_score_codex":0.0013001665,"about_ca_system_score_gemma":0.0013422314,"threshold_uncertainty_score":0.013608873},"labels":[],"label_agreement":null},{"id":"W4406479550","doi":"10.1016/s0024-7804(97)86865-0","title":"10.1016/s0024-7804(97)86865-0","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Philosophy; Medicine","score_opus":0.006318737724251191,"score_gpt":0.20879709428699691,"score_spread":0.20247835656274574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406479550","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00047893226,0.0007202221,0.00090898975,0.000477472,0.00055722665,0.00021081592,0.0009126323,0.001071403,0.99466234],"genre_scores_gemma":[0.00041475342,0.00031938657,0.00040756265,0.00021442314,0.000118940865,0.00012432935,0.00045505402,0.00017821726,0.9977673],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990877,0.00006021509,0.00007652909,0.00034415454,0.00022879113,0.00020251008],"domain_scores_gemma":[0.9965354,0.00082468113,0.00022750608,0.00036424186,0.0006962453,0.0013518644],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0017625298,0.005092558,0.0039138384,0.0044489624,0.0032285016,0.005575971,0.0062872022,0.008374527,0.9894525],"category_scores_gemma":[0.0021046374,0.001677569,0.0026787107,0.0042477543,0.003616874,0.007363573,0.0038878305,0.0042212866,0.9936698],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000577808,0.00034027884,0.00067140395,0.0013449237,0.00008505008,0.0003540217,0.00016197385,0.00062542054,0.003351639,0.0069754,0.37649745,0.6090146],"study_design_scores_gemma":[0.00009921628,0.00018354418,0.0007458795,0.0005258474,0.000021279775,0.00037317546,0.00013164959,0.00022605945,0.00037466906,0.00061693834,0.99666387,0.000037740367],"about_ca_topic_score_codex":0.0051135956,"about_ca_topic_score_gemma":0.0033566167,"teacher_disagreement_score":0.010547519,"about_ca_system_score_codex":0.00177909,"about_ca_system_score_gemma":0.0014761076,"threshold_uncertainty_score":0.015044689},"labels":[],"label_agreement":null},{"id":"W4406536309","doi":"10.1016/s1166-8598(20)30257-x","title":"10.1016/s1166-8598(20)30257-x","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Geography","score_opus":0.005130937760945112,"score_gpt":0.20772264291896336,"score_spread":0.20259170515801825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406536309","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00033768394,0.00048577192,0.00063384103,0.00042115359,0.00047247525,0.00012426425,0.00074848544,0.00094178866,0.99583447],"genre_scores_gemma":[0.0003799752,0.00022286965,0.00036328504,0.00022732152,0.00010664012,0.000069762966,0.0004228323,0.00013298551,0.9980743],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994112,0.0000350425,0.00005110186,0.00020070423,0.00018791965,0.00011403948],"domain_scores_gemma":[0.9977297,0.00042216704,0.00013278768,0.0002688003,0.00042365445,0.00102296],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0011154154,0.0031564478,0.0020491583,0.0031588327,0.0025341795,0.0038815166,0.0036620968,0.0056592994,0.9898031],"category_scores_gemma":[0.0014670297,0.0010609844,0.0018896176,0.0025110706,0.0019349618,0.0051330226,0.0031872701,0.003062549,0.9930569],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039565036,0.00029042666,0.0006213588,0.0007616374,0.000039313985,0.00022588606,0.00008688451,0.000352826,0.0024780754,0.0051795184,0.39193267,0.5976357],"study_design_scores_gemma":[0.000059389225,0.000104461506,0.0006319509,0.00024728975,0.000010287774,0.00029264117,0.00007341358,0.00012626038,0.00027562838,0.0004971487,0.9976605,0.000021063654],"about_ca_topic_score_codex":0.0040808446,"about_ca_topic_score_gemma":0.0034230587,"teacher_disagreement_score":0.010196924,"about_ca_system_score_codex":0.0011076417,"about_ca_system_score_gemma":0.0012155384,"threshold_uncertainty_score":0.014544606},"labels":[],"label_agreement":null},{"id":"W4406582239","doi":"10.1016/s1283-0828(98)20527-8","title":"10.1016/s1283-0828(98)20527-8","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Philosophy","score_opus":0.0060605407457498045,"score_gpt":0.21400163332592212,"score_spread":0.20794109258017232,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406582239","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00036967485,0.00053006277,0.0007999023,0.00044304243,0.00045756757,0.00015674437,0.00083923596,0.0011638516,0.99523985],"genre_scores_gemma":[0.00042640883,0.00024298392,0.00043758305,0.00028295896,0.00012336182,0.0000982452,0.00046565168,0.0001629745,0.9977598],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992719,0.00004336449,0.00006217058,0.0002626681,0.00020528496,0.00015458553],"domain_scores_gemma":[0.99725926,0.0005816015,0.00016715207,0.00030963475,0.0005455945,0.0011368389],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0013013459,0.003775618,0.0024587966,0.0030798055,0.0026060692,0.0045823283,0.004619687,0.0066488967,0.99008757],"category_scores_gemma":[0.001761059,0.0013131928,0.0020934788,0.002447003,0.0022705498,0.006083837,0.0037767568,0.0034868426,0.99391985],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046504484,0.0002708997,0.0005988674,0.0007272794,0.000049452312,0.00025926245,0.00009343498,0.00041234022,0.002297037,0.0047979555,0.42399916,0.56602925],"study_design_scores_gemma":[0.00009041205,0.00014550515,0.0006830787,0.0003519009,0.00001551747,0.00038883794,0.000097526776,0.00018524441,0.00028370452,0.00056700496,0.9971607,0.000030655254],"about_ca_topic_score_codex":0.0037840824,"about_ca_topic_score_gemma":0.0031537632,"teacher_disagreement_score":0.009912431,"about_ca_system_score_codex":0.0012452275,"about_ca_system_score_gemma":0.0010723594,"threshold_uncertainty_score":0.014138877},"labels":[],"label_agreement":null},{"id":"W4406642853","doi":"10.1016/b978-2-294-76306-9.50590-1","title":"10.1016/b978-2-294-76306-9.50590-1","year":2000,"lang":"en","type":"book-chapter","venue":"Time to knit","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Computer science","score_opus":0.008502110614208606,"score_gpt":0.20839947129061648,"score_spread":0.19989736067640787,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406642853","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00024165094,0.00066321186,0.0009797557,0.00043972838,0.00022407535,0.00005793492,0.0008494161,0.0010866844,0.99545765],"genre_scores_gemma":[0.0005556835,0.0003576859,0.0004228923,0.00015407069,0.00004491536,0.00004286406,0.00049304176,0.00019482139,0.99773395],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99965084,0.000017956316,0.000020727874,0.00012652975,0.00011017508,0.00007375658],"domain_scores_gemma":[0.9988292,0.00034743518,0.000080985505,0.00012917626,0.00018573123,0.00042748303],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00075929717,0.002101765,0.0015419327,0.0015655347,0.0012041837,0.0038181068,0.0026331749,0.0039631603,0.98173356],"category_scores_gemma":[0.0013126764,0.0007191285,0.00083946117,0.0015380101,0.0010505259,0.003987719,0.0027623405,0.002283168,0.99015146],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019303293,0.00014253976,0.0002991983,0.0004328739,0.000018061888,0.00013356408,0.00007032294,0.0003760284,0.002580776,0.005312577,0.37831163,0.61212945],"study_design_scores_gemma":[0.000022907903,0.000047377,0.0004897876,0.00027939974,0.0000075252397,0.00022820976,0.00006720203,0.000126417,0.00028795615,0.0010365023,0.9973942,0.000012531491],"about_ca_topic_score_codex":0.0022843056,"about_ca_topic_score_gemma":0.0019900827,"teacher_disagreement_score":0.01826644,"about_ca_system_score_codex":0.00085826044,"about_ca_system_score_gemma":0.0006467643,"threshold_uncertainty_score":0.0260548},"labels":[],"label_agreement":null},{"id":"W4406643391","doi":"10.1016/b978-2-294-76306-9.50099-5","title":"10.1016/b978-2-294-76306-9.50099-5","year":2000,"lang":"en","type":"book-chapter","venue":"Time to knit","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Dermatology","score_opus":0.008457253251317914,"score_gpt":0.20850874943094788,"score_spread":0.20005149617962997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406643391","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000250818,0.00067369215,0.0011001094,0.00040030788,0.0002335699,0.00006187269,0.00084439106,0.001110595,0.9953246],"genre_scores_gemma":[0.00056458387,0.00033783363,0.00041934772,0.00014790667,0.00004518584,0.000042531803,0.0005048492,0.00019282941,0.9977449],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99961793,0.00001967279,0.000023244367,0.00013952234,0.000120645695,0.00007907001],"domain_scores_gemma":[0.99874336,0.00036981262,0.00008422686,0.0001482607,0.00019680386,0.00045765517],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0008114834,0.002196184,0.0015982206,0.0016044443,0.0012445499,0.0041246717,0.002925598,0.0042924797,0.9821191],"category_scores_gemma":[0.001264004,0.0008074655,0.00093193154,0.0016040702,0.0011352705,0.00409184,0.0029206087,0.0024664444,0.99079984],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022622672,0.0001670578,0.00032475925,0.00048700164,0.000023043895,0.00015524213,0.0000746319,0.0004330204,0.003049006,0.005577187,0.35082135,0.6386614],"study_design_scores_gemma":[0.000026211615,0.00005467859,0.0004741888,0.00029160787,0.000008301251,0.00024766335,0.00007002741,0.00014297913,0.00034369505,0.0010409227,0.9972857,0.000014013525],"about_ca_topic_score_codex":0.0021518604,"about_ca_topic_score_gemma":0.0019593737,"teacher_disagreement_score":0.017880917,"about_ca_system_score_codex":0.0008665559,"about_ca_system_score_gemma":0.00066458696,"threshold_uncertainty_score":0.025504887},"labels":[],"label_agreement":null},{"id":"W4406647361","doi":"10.1016/b978-81-312-5487-5.00017-3","title":"10.1016/b978-81-312-5487-5.00017-3","year":2000,"lang":"en","type":"book-chapter","venue":"Time to knit","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Biology","score_opus":0.009048802167173296,"score_gpt":0.21053826272466092,"score_spread":0.20148946055748762,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406647361","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002369005,0.0008018766,0.0010350556,0.00039383254,0.00025848323,0.00006878548,0.0008864473,0.00097540935,0.9953432],"genre_scores_gemma":[0.0005230335,0.00042185458,0.0003808201,0.00014828434,0.000057165602,0.000047795456,0.0005517582,0.00017660463,0.9976927],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995988,0.000020633666,0.000024625935,0.00015125405,0.000121417295,0.000083269064],"domain_scores_gemma":[0.9985607,0.00041822428,0.00009939298,0.00017142002,0.00022579437,0.0005243832],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00083577534,0.002605188,0.0017761987,0.0017973533,0.0012045697,0.0042069275,0.0031098346,0.004245466,0.9811794],"category_scores_gemma":[0.0012509366,0.00086247094,0.0010151685,0.0018013462,0.0013446836,0.0042626387,0.0029760567,0.0025586162,0.9910028],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023589698,0.0001734014,0.00032688395,0.0005756865,0.000026514224,0.00016467478,0.000082887665,0.0004356788,0.0032498802,0.0055935737,0.3737589,0.61537594],"study_design_scores_gemma":[0.000029538878,0.00006270879,0.00055991125,0.00032924648,0.000009138325,0.00027467185,0.000072553354,0.00012999983,0.0003307155,0.0010914102,0.9970943,0.00001581461],"about_ca_topic_score_codex":0.0023220887,"about_ca_topic_score_gemma":0.0018249995,"teacher_disagreement_score":0.018820584,"about_ca_system_score_codex":0.00080915156,"about_ca_system_score_gemma":0.0006928365,"threshold_uncertainty_score":0.026845276},"labels":[],"label_agreement":null},{"id":"W4406649729","doi":"10.1016/b978-2-8101-0119-1.50009-0","title":"10.1016/b978-2-8101-0119-1.50009-0","year":2000,"lang":"en","type":"book-chapter","venue":"Time to knit","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine","score_opus":0.008499692403456547,"score_gpt":0.20747713947532231,"score_spread":0.19897744707186577,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406649729","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00023444493,0.00069645286,0.0013125344,0.00042998217,0.00027150635,0.00005872352,0.0007289237,0.0010624814,0.9952049],"genre_scores_gemma":[0.0004924207,0.0003733223,0.0005206351,0.00015674907,0.000054671604,0.000041659765,0.00051160454,0.0001950785,0.9976539],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999676,0.000018634371,0.000019520721,0.00011072201,0.00010899461,0.00006613568],"domain_scores_gemma":[0.998798,0.00034175438,0.00007058304,0.00015075199,0.0001929446,0.00044592578],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0006904319,0.0019487725,0.0013426285,0.0015158138,0.0010539774,0.0033445263,0.0026642848,0.0037349784,0.9791925],"category_scores_gemma":[0.0012155651,0.00067673135,0.00087745325,0.0014478859,0.0009693811,0.0035238573,0.00251591,0.0021429555,0.98839325],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018456203,0.00014365702,0.00026929015,0.00040527643,0.000017782355,0.0001277132,0.00006275563,0.00029862998,0.0027662977,0.005736562,0.35006574,0.63992167],"study_design_scores_gemma":[0.000019993628,0.00004213235,0.0004291907,0.00019924219,0.0000062203267,0.00022358607,0.000048182093,0.000099428085,0.00026480798,0.00095260807,0.9977043,0.000010246806],"about_ca_topic_score_codex":0.002116648,"about_ca_topic_score_gemma":0.0018474725,"teacher_disagreement_score":0.020807505,"about_ca_system_score_codex":0.00070048217,"about_ca_system_score_gemma":0.0006262339,"threshold_uncertainty_score":0.029679298},"labels":[],"label_agreement":null},{"id":"W4406654742","doi":"10.1016/b978-0-7020-7455-4.00174-6","title":"10.1016/b978-0-7020-7455-4.00174-6","year":2000,"lang":"en","type":"book-chapter","venue":"Time to knit","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Ophthalmology; Medicine","score_opus":0.008711436490684687,"score_gpt":0.20933956470557857,"score_spread":0.2006281282148939,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406654742","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002656358,0.0009886666,0.0013193421,0.00048562686,0.00028014113,0.00006567433,0.0009738504,0.0012881067,0.994333],"genre_scores_gemma":[0.00052434293,0.0004621888,0.00047978124,0.00016338882,0.00006243941,0.00004644832,0.00057910423,0.00021329356,0.99746907],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99962854,0.00001933585,0.000023402048,0.00013166472,0.00011827938,0.000078727135],"domain_scores_gemma":[0.9985448,0.00042014525,0.0001086203,0.0001870037,0.00021120087,0.0005281671],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0008592869,0.002443167,0.0017149419,0.0017739546,0.0011272813,0.0039084214,0.0031536568,0.0042510065,0.9784828],"category_scores_gemma":[0.0012531524,0.00081169227,0.0010189028,0.0016990919,0.0011534892,0.0043582916,0.0030236794,0.0025328044,0.989585],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022061622,0.0001531949,0.00031237424,0.00048809408,0.000023624092,0.00013621591,0.0000703729,0.00036464407,0.0032508962,0.005730591,0.33660865,0.65264064],"study_design_scores_gemma":[0.000030298852,0.000056974313,0.0005594909,0.0002802898,0.000008951004,0.0002706303,0.000063616935,0.00011517879,0.00036505854,0.001138272,0.99709666,0.000014723873],"about_ca_topic_score_codex":0.0023248363,"about_ca_topic_score_gemma":0.0019336445,"teacher_disagreement_score":0.021517217,"about_ca_system_score_codex":0.0007964328,"about_ca_system_score_gemma":0.000737857,"threshold_uncertainty_score":0.030691683},"labels":[],"label_agreement":null},{"id":"W4406688570","doi":"10.1016/b978-2-294-73068-9.00375-3","title":"10.1016/b978-2-294-73068-9.00375-3","year":2000,"lang":"en","type":"book-chapter","venue":"Time to knit","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Computer science","score_opus":0.008452266540260562,"score_gpt":0.20818345168695268,"score_spread":0.1997311851466921,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406688570","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00025979715,0.00072640664,0.0011630884,0.00044911169,0.00024887806,0.00006144773,0.0010350044,0.0012049725,0.9948513],"genre_scores_gemma":[0.0006115206,0.0003639112,0.00048481347,0.00015968068,0.000052935087,0.000046899226,0.0005986639,0.00022272757,0.9974589],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996482,0.000018405242,0.000022308077,0.00012659919,0.00011169985,0.00007288675],"domain_scores_gemma":[0.9987608,0.0003901054,0.00008705158,0.00015246312,0.00019310234,0.00041651],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0007989202,0.0022394634,0.0015455406,0.0015659155,0.0011056772,0.0038314713,0.0027651254,0.004023034,0.981029],"category_scores_gemma":[0.0012542218,0.0007426557,0.0008870605,0.0016131165,0.0011289874,0.004056518,0.002887617,0.0024334164,0.99006736],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021619016,0.00015191929,0.00034658398,0.0004354942,0.000022190417,0.00014295362,0.00006804821,0.00040978094,0.0028909254,0.0058503677,0.36989716,0.6195684],"study_design_scores_gemma":[0.000028365308,0.000051042316,0.0005278894,0.00026857902,0.000007953491,0.0002478564,0.00006355372,0.00013417895,0.0003341165,0.0011668337,0.9971554,0.000014206148],"about_ca_topic_score_codex":0.0021762354,"about_ca_topic_score_gemma":0.0018238776,"teacher_disagreement_score":0.018971026,"about_ca_system_score_codex":0.0007803537,"about_ca_system_score_gemma":0.00063540105,"threshold_uncertainty_score":0.027059853},"labels":[],"label_agreement":null},{"id":"W4406886010","doi":"10.1111/ddi.13945","title":"Potential Landscapes for Conservation of the Black‐Tailed Prairie Dog Ecosystem","year":2025,"lang":"en","type":"article","venue":"Diversity and Distributions","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Liber Ero Foundation; Western Association of Fish and Wildlife Agencies; Kansas Department of Wildlife and Parks; Agricultural Research Service; Wildlife Conservation Society; Colorado State University; U.S. Department of Agriculture; Office of Experimental Program to Stimulate Competitive Research; National Science Foundation","keywords":"Geography; Cynomys ludovicianus; Ecosystem; Climate change; Conservation status; Ecology; Range (aeronautics); Environmental resource management; Ecosystem management; Habitat; Prairie dog; Environmental science; Biology","score_opus":0.009313877576524002,"score_gpt":0.25267134245725126,"score_spread":0.24335746488072726,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406886010","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9867198,0.0003341157,0.0046752905,0.0005594115,0.000005425762,0.000040354327,0.0005927617,0.000022797782,0.007050194],"genre_scores_gemma":[0.996894,0.00008121076,0.0026091484,0.00002342066,0.000002141227,0.0000121575495,0.00014271065,0.0000016739548,0.00023350376],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996984,0.00013601885,0.000010118601,0.000049227685,0.000042696232,0.00006353438],"domain_scores_gemma":[0.9994752,0.00016327258,0.00015918737,0.00003419247,0.00007765982,0.000090551504],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005667801,0.00015775213,0.00012860021,0.0011217282,0.0007422111,0.0016332344,0.0003061803,0.00025923262,0.0034667102],"category_scores_gemma":[0.0013397295,0.00012384557,0.00021040444,0.00082573696,0.00051691436,0.00088135793,0.0012434366,0.00024727295,0.00008554229],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018676963,0.00019457935,0.83133835,0.00024115194,0.00025858262,0.0007663669,0.001411219,0.044403013,0.0071810535,0.012005295,0.0031808103,0.09883276],"study_design_scores_gemma":[0.000030646985,0.00023510645,0.9077961,0.00015430042,0.00011122781,0.0005490862,0.008404644,0.060062677,0.00072388677,0.013334113,0.008556935,0.00004132691],"about_ca_topic_score_codex":0.006818018,"about_ca_topic_score_gemma":0.047855258,"teacher_disagreement_score":0.006818018,"about_ca_system_score_codex":0.000818718,"about_ca_system_score_gemma":0.0006033904,"threshold_uncertainty_score":0.013556659},"labels":[],"label_agreement":null},{"id":"W4407589862","doi":"10.1101/2025.02.12.637901","title":"Probing the zooarchaeological record across time and space for ancient pathogens","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University; Western University","funders":"","keywords":"Archaeology; Geography; Spacetime; Zooarchaeology; History; Ecology; Biology; Physics","score_opus":0.015273503102753359,"score_gpt":0.2655106478818974,"score_spread":0.250237144779144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407589862","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98845774,0.002096067,0.002875407,0.00036831544,0.000032947875,0.0000105838035,0.0027881311,0.00004078605,0.0033299574],"genre_scores_gemma":[0.98729044,0.0016895153,0.0042709713,0.000115981835,0.000050034105,0.000014797672,0.0036127684,0.000050711253,0.0029048296],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99970466,0.000048195332,0.000016723188,0.000104290324,0.00007381312,0.000052365558],"domain_scores_gemma":[0.9992599,0.000101349644,0.00027919907,0.00010727825,0.00017366161,0.00007859752],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00093163195,0.00025441,0.00022835378,0.0023975908,0.00083180325,0.0013866673,0.00028425385,0.00043026824,0.0042379294],"category_scores_gemma":[0.0009810489,0.00019615683,0.00018790006,0.002967289,0.0007770623,0.0006534913,0.00095652987,0.00047978564,0.00091713516],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028444594,0.00004096691,0.81099886,0.00027093064,0.00015873859,0.0003659767,0.0037036722,0.0003701509,0.13499525,0.0014422354,0.0012324123,0.04613636],"study_design_scores_gemma":[0.000001736015,0.00002066948,0.9907274,0.000025924248,0.000018024804,0.00027450267,0.0010644182,0.00015411839,0.0022039164,0.00027681925,0.005225832,0.0000065435593],"about_ca_topic_score_codex":0.006438136,"about_ca_topic_score_gemma":0.0154573545,"teacher_disagreement_score":0.006438136,"about_ca_system_score_codex":0.00036241225,"about_ca_system_score_gemma":0.00029824124,"threshold_uncertainty_score":0.014177263},"labels":[],"label_agreement":null},{"id":"W4408373117","doi":"10.1111/aje.70032","title":"Okapi Survival Threats: A Population Reconstruction and Threat Analysis","year":2025,"lang":"en","type":"article","venue":"African Journal of Ecology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Moncton","funders":"","keywords":"Population; Geography; Biology; Environmental health; Medicine","score_opus":0.009872562001154694,"score_gpt":0.29338835583953493,"score_spread":0.2835157938383802,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408373117","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941093,0.0000917038,0.002532605,0.00006118829,0.000003084078,0.000023413199,0.001211205,0.000032442393,0.0019352268],"genre_scores_gemma":[0.995906,0.00007646988,0.0019310161,0.0000044443664,0.000001874984,0.000021469763,0.0012192235,0.000004350178,0.0008350844],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998685,0.000036185833,0.000009254173,0.000030319112,0.000022849865,0.000032787342],"domain_scores_gemma":[0.99958235,0.00012811409,0.00012221631,0.000044892142,0.000091295864,0.00003105842],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004795582,0.00026420585,0.00016561408,0.002064235,0.00046386803,0.0005380615,0.0003974972,0.00020514573,0.0039852005],"category_scores_gemma":[0.0011429328,0.00013571451,0.0004433374,0.0012289692,0.0002014299,0.00034793591,0.00061146996,0.00035464152,0.00054384116],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022750588,0.0000806248,0.9074216,0.000062560655,0.00013938957,0.0006735276,0.0005747638,0.047937095,0.00216451,0.0017722627,0.0011576538,0.03778866],"study_design_scores_gemma":[0.000014870588,0.00026773734,0.7610471,0.00006127736,0.00012649634,0.0012409571,0.0032615203,0.22612622,0.0013538611,0.0014241822,0.0050293026,0.000046437737],"about_ca_topic_score_codex":0.015851475,"about_ca_topic_score_gemma":0.015658202,"teacher_disagreement_score":0.015851475,"about_ca_system_score_codex":0.00071247894,"about_ca_system_score_gemma":0.00035518,"threshold_uncertainty_score":0.0315184},"labels":[],"label_agreement":null},{"id":"W4408568124","doi":"10.3138/mous.20.03.06","title":"Colin Elliott. <i>Pox Romana: The Plague That Shook the Roman World</i>","year":2025,"lang":"en","type":"article","venue":"Mouseion Journal of the Classical Association of Canada","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Plague (disease); History; Pox virus; Ancient history; Classics; Art; Humanities; Genealogy; Virology; Biology","score_opus":0.006308887500735099,"score_gpt":0.22990417794505294,"score_spread":0.22359529044431783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408568124","genre_codex":"commentary","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00054631574,0.12959711,0.00041487376,0.5509581,0.22504069,0.000066330824,0.0007073557,0.0002735908,0.092395574],"genre_scores_gemma":[0.0038399105,0.057420984,0.000500658,0.4452693,0.07248968,0.00007797365,0.0004029977,0.00027813404,0.41972032],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993112,0.00011266673,0.0000575047,0.00015489857,0.00028285835,0.00008093856],"domain_scores_gemma":[0.9981164,0.0006195388,0.00013784265,0.000069225236,0.00050290674,0.0005541149],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00088691124,0.001157821,0.0005049437,0.001949366,0.0025699756,0.0027402225,0.0012832627,0.006338185,0.039554663],"category_scores_gemma":[0.003949554,0.00042233453,0.00042605735,0.0012308183,0.0012655919,0.0021739358,0.0017640407,0.00603507,0.025353607],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000073245433,0.000005144263,0.000083748564,0.000038436727,0.0000018499204,0.000050692757,0.00004824863,0.0000044846556,0.000042684806,0.0004680386,0.9928797,0.006369618],"study_design_scores_gemma":[0.000002760803,0.000004106364,0.00035125823,0.000074896154,0.0000015589243,0.00010373825,0.00011853203,0.000005386966,0.000048235455,0.00021052855,0.9990742,0.000004839573],"about_ca_topic_score_codex":0.03971303,"about_ca_topic_score_gemma":0.14431465,"teacher_disagreement_score":0.03971303,"about_ca_system_score_codex":0.0014137998,"about_ca_system_score_gemma":0.0012386552,"threshold_uncertainty_score":0.1323235},"labels":[],"label_agreement":null},{"id":"W4409586463","doi":"10.3366/burns.2025.0131","title":"Robert Burns in Princeton BC: An Exploration","year":2025,"lang":"en","type":"article","venue":"Burns Chronicle","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"History; Environmental ethics; Philosophy","score_opus":0.019076382027874123,"score_gpt":0.32390347080938076,"score_spread":0.30482708878150666,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409586463","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.01362021,0.10426933,0.0005217751,0.20110321,0.0041787694,0.000026692764,0.0002140036,0.000039447055,0.6760266],"genre_scores_gemma":[0.22449851,0.10029798,0.0014313057,0.030684426,0.0015828942,0.000043223,0.0001509057,0.000162614,0.64114815],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992508,0.0002218455,0.0000147331,0.00009681319,0.0002704239,0.00014530709],"domain_scores_gemma":[0.99961096,0.00011660138,0.000030151523,0.000024398265,0.000080512706,0.00013737821],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006740672,0.00021881713,0.00019049595,0.0010166469,0.0069811814,0.0032246767,0.0004848567,0.0013560085,0.026042573],"category_scores_gemma":[0.0013394131,0.0002519147,0.00009987839,0.0018825872,0.004746603,0.0029874612,0.0016879218,0.0027679342,0.001994701],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038618175,0.000025656505,0.0013499975,0.00011530325,0.000005868535,0.00061334757,0.013678916,0.000089849236,0.00024833638,0.30070263,0.6003183,0.082813144],"study_design_scores_gemma":[7.1471356e-7,0.0000019344843,0.00063922757,0.000087882516,4.5845167e-7,0.00007413072,0.0032931287,0.00001116896,0.000025036103,0.004117673,0.9917453,0.0000032833987],"about_ca_topic_score_codex":0.26412737,"about_ca_topic_score_gemma":0.46729797,"teacher_disagreement_score":0.7358726,"about_ca_system_score_codex":0.013266956,"about_ca_system_score_gemma":0.008013965,"threshold_uncertainty_score":0.52518},"labels":[],"label_agreement":null},{"id":"W4409645587","doi":"10.1093/jaoacint/qsaf038","title":"Dual-Gene Based Recombinase-Aided Amplification (RAA) - Lateral Flow Strip for the Sensitive On-Site Detection of <i>Yersinia enterocolitica</i> in Food Samples","year":2025,"lang":"en","type":"article","venue":"Journal of AOAC International","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Science Foundation of Ningbo; National Natural Science Foundation of China","keywords":"Yersinia enterocolitica; Detection limit; Biology; Recombinase Polymerase Amplification; Pathogen; Assay sensitivity; Gene; Polymerase chain reaction; Microbiology; Bacteria; Genetics; Chromatography; Chemistry; Medicine","score_opus":0.017418972790697946,"score_gpt":0.2942807520258834,"score_spread":0.27686177923518546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409645587","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.82939935,0.002065428,0.16406432,0.0002799895,0.0000811863,0.00040051073,0.0007178985,0.0013795242,0.0016118278],"genre_scores_gemma":[0.749172,0.00124361,0.2443698,0.00029144445,0.000039550294,0.0005715914,0.0010283637,0.00006847567,0.0032151493],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986104,0.00041996254,0.00008157947,0.00038857508,0.00041297005,0.00008650273],"domain_scores_gemma":[0.9992755,0.00029485876,0.00020672554,0.000046142497,0.00013608468,0.000040829258],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012280091,0.0009277084,0.0004986264,0.0007740171,0.00019181152,0.0005433573,0.0006574619,0.0008912354,0.00076519453],"category_scores_gemma":[0.0009898329,0.00041740673,0.0004126978,0.0003070942,0.00051424536,0.00036887242,0.0004035481,0.0005971387,0.0006980404],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008523109,0.000057790763,0.0010543788,0.00007245289,0.000009024051,0.000033476885,0.000036777437,0.00011799426,0.99466866,0.0000393146,0.000056870493,0.0037680017],"study_design_scores_gemma":[0.00001262553,0.00034295343,0.003111301,0.0000129667405,0.000023364853,0.00034689996,0.000033690725,0.0070129167,0.988139,0.000032149845,0.0009102258,0.000021973],"about_ca_topic_score_codex":0.00036000749,"about_ca_topic_score_gemma":0.00063943083,"teacher_disagreement_score":0.0012280091,"about_ca_system_score_codex":0.00030315833,"about_ca_system_score_gemma":0.00035427825,"threshold_uncertainty_score":0.006494403},"labels":[],"label_agreement":null},{"id":"W4410850984","doi":"10.1126/science.adt3880","title":"Attenuation of virulence in <i>Yersinia pestis</i> across three plague pandemics","year":2025,"lang":"en","type":"article","venue":"Science","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Canadian Institute for Advanced Research; McMaster University Medical Centre","funders":"Agence Nationale de la Recherche","keywords":"Yersinia pestis; Virulence; Plague (disease); Pandemic; Plasmid; Microbiology; Biology; Virology; Yersiniosis; Rodent; Yersinia pseudotuberculosis; Enterobacteriaceae; Infectious disease (medical specialty); Gene; Coronavirus disease 2019 (COVID-19); Disease; Escherichia coli; Genetics; Medicine; Ecology","score_opus":0.012932936870794418,"score_gpt":0.3405463854834723,"score_spread":0.3276134486126779,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410850984","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993899,0.00011597491,0.00019497209,0.000020123362,0.0000022386107,0.000004783625,0.000064571985,0.000012482337,0.00019486374],"genre_scores_gemma":[0.999064,0.00009953473,0.0002895627,0.000023268316,0.0000017853176,0.0000073594406,0.00023281135,0.0000049839887,0.00027664044],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99988186,0.000014106019,0.000011573984,0.00002520343,0.00002267518,0.000044577046],"domain_scores_gemma":[0.99984205,0.000017834453,0.000061006827,0.000016347205,0.000022425913,0.000040290182],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017594478,0.00021792643,0.00021846984,0.00017112927,0.0001192757,0.00025519053,0.00016617723,0.00019093892,0.00038950398],"category_scores_gemma":[0.00022704879,0.000103492486,0.00017259312,0.0001438294,0.00019138367,0.00019013355,0.00026547976,0.0005040596,0.00009490756],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015893907,0.000033977576,0.0029344496,0.000012766757,0.0000063795296,0.00003878038,0.000030844054,0.00004910361,0.99518377,0.000036365847,0.00001953721,0.001495055],"study_design_scores_gemma":[0.000037367394,0.0026270093,0.3321119,0.000014010795,0.000042300904,0.00073315285,0.00023640173,0.001067835,0.66157115,0.00011057854,0.0014313742,0.000016919887],"about_ca_topic_score_codex":0.0010365443,"about_ca_topic_score_gemma":0.001109465,"teacher_disagreement_score":0.0010365443,"about_ca_system_score_codex":0.00039031164,"about_ca_system_score_gemma":0.00018460935,"threshold_uncertainty_score":0.0028318763},"labels":[],"label_agreement":null},{"id":"W4412379976","doi":"10.1503/cmaj.250820-f","title":"Personnes enceintes et fardeau lié aux éclosions de rougeole au Canada","year":2025,"lang":"fr","type":"editorial","venue":"Canadian Medical Association Journal","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Schwartz/Reisman Emergency Medicine Institute","funders":"","keywords":"Computer science; Medicine","score_opus":0.004692219256642538,"score_gpt":0.2700835249196348,"score_spread":0.26539130566299224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412379976","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0009191798,0.06905695,0.00034861822,0.120826796,0.79802984,0.000030254396,0.0008485165,0.000073225594,0.009866619],"genre_scores_gemma":[0.020257995,0.12781854,0.00038368464,0.052639894,0.7491763,0.00004515334,0.0005571492,0.000120012475,0.049001213],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99874204,0.00016276057,0.0001252925,0.00019348768,0.0006212674,0.00015522829],"domain_scores_gemma":[0.9950236,0.0017698021,0.00023213444,0.00006745146,0.0022539403,0.0006530326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017970522,0.00094170845,0.0010200454,0.001958476,0.001822725,0.0025945394,0.0016457307,0.0054599373,0.013241264],"category_scores_gemma":[0.009626208,0.00040202335,0.00073577894,0.0012757678,0.0014146557,0.00088857504,0.000497427,0.005253065,0.0023964425],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008045948,0.000005167133,0.0006219749,0.0003800925,0.00002933481,0.00041879676,0.0001519759,0.000022765285,0.00005778254,0.0005636942,0.9861367,0.01153127],"study_design_scores_gemma":[0.000029197927,0.000015838918,0.0053892424,0.0013487955,0.0000876234,0.0004715341,0.0004594598,0.00007191047,0.000087184286,0.00034096028,0.9916732,0.000025026404],"about_ca_topic_score_codex":0.40803123,"about_ca_topic_score_gemma":0.53480333,"teacher_disagreement_score":0.5919688,"about_ca_system_score_codex":0.0072349347,"about_ca_system_score_gemma":0.010077569,"threshold_uncertainty_score":0.81131244},"labels":[],"label_agreement":null},{"id":"W4413181794","doi":"10.62940/als.v9i4.1461","title":"Prevalence of Black Quarter in Association with Patho-Morphological Alterations in Affected Tissues at Different Zones of Punjab-Pakistan","year":2023,"lang":"en","type":"article","venue":"Advancements in Life Sciences","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Quarter (Canadian coin); Association (psychology); Biology; Veterinary medicine; Demography; Medicine; Geography; Psychology; Archaeology","score_opus":0.01914491475448982,"score_gpt":0.3379624202735654,"score_spread":0.31881750551907556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413181794","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9994399,0.00008085269,0.000042408465,0.000024331337,0.0000029937514,0.000007848639,0.00013093546,0.0000024294943,0.00026836662],"genre_scores_gemma":[0.9994085,0.00010566864,0.00012383156,0.000018268065,0.0000032340183,0.0000052576365,0.00012798923,6.7632305e-7,0.00020655204],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999724,0.000042240234,0.00002043095,0.00007587835,0.000052924763,0.000084577405],"domain_scores_gemma":[0.99953675,0.00005585352,0.00023669195,0.000015092226,0.000052062445,0.00010366689],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023326614,0.00027163408,0.00018282903,0.001009296,0.00074387615,0.0005358543,0.00024619317,0.00031425696,0.0017889318],"category_scores_gemma":[0.00041167557,0.0003163268,0.00014782704,0.0006462572,0.0007645382,0.00029552262,0.00033470907,0.0002550368,0.00012939014],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000096478296,0.00004969598,0.9936559,0.00003654831,0.000015060127,0.00076685485,0.0005851049,0.000039245144,0.002597455,0.00003054576,0.000121160316,0.0020058888],"study_design_scores_gemma":[0.0000033683477,0.00016570491,0.9969476,0.000013248892,0.0000073765455,0.0011611882,0.0012275991,0.000046058147,0.00021682374,0.0000150855385,0.00019202924,0.000003900423],"about_ca_topic_score_codex":0.011995567,"about_ca_topic_score_gemma":0.025004964,"teacher_disagreement_score":0.011995567,"about_ca_system_score_codex":0.00041622441,"about_ca_system_score_gemma":0.0004021602,"threshold_uncertainty_score":0.023851454},"labels":[],"label_agreement":null},{"id":"W4413602613","doi":"10.64628/aam.7rjj4g7p9","title":"Why we’ll keep finding meaning in the ‘Oedipus Rex’ plague drama far beyond COVID-19","year":2023,"lang":"en","type":"preprint","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Plague (disease); Drama; Coronavirus disease 2019 (COVID-19); Meaning (existential); Pandemic; 2019-20 coronavirus outbreak; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); History; Art; Literature; Virology; Philosophy; Ancient history; Medicine; Epistemology; Infectious disease (medical specialty)","score_opus":0.06497277003598305,"score_gpt":0.35437112429485296,"score_spread":0.2893983542588699,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413602613","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0062315725,0.022736477,0.0031327202,0.8518538,0.015161001,0.0000071231084,0.00011885805,0.00015347365,0.10060505],"genre_scores_gemma":[0.4516216,0.02171469,0.0050717983,0.28880456,0.023659293,0.0000713684,0.0002653822,0.0012369386,0.20755439],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972402,0.0013930753,0.000070113965,0.00033394073,0.0006229737,0.00033968478],"domain_scores_gemma":[0.9954919,0.0023565548,0.00024135847,0.00052393106,0.0009052182,0.0004810382],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004206548,0.00041962508,0.0005337119,0.00076262996,0.0039607952,0.009121538,0.00077510026,0.0061306553,0.011582624],"category_scores_gemma":[0.012016908,0.00023036281,0.0002638781,0.00074070325,0.019776639,0.018076584,0.003438911,0.010035442,0.0048669945],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044208475,0.000013370807,0.0003720269,0.000110381035,0.000013245603,0.00020194198,0.010325644,0.000053533902,0.00051654,0.6919985,0.27891245,0.01743813],"study_design_scores_gemma":[0.000008819511,0.000006902907,0.0003788225,0.000101980964,0.00000408433,0.00017140963,0.0050094975,0.00006688253,0.00022667753,0.1743759,0.8196278,0.000021258986],"about_ca_topic_score_codex":0.0026111507,"about_ca_topic_score_gemma":0.0028208778,"teacher_disagreement_score":0.011582624,"about_ca_system_score_codex":0.0023569323,"about_ca_system_score_gemma":0.0012547307,"threshold_uncertainty_score":0.038747728},"labels":[],"label_agreement":null},{"id":"W4414796309","doi":"10.24908/lhps.v4i1.18761","title":"Plagues and Paychecks","year":2025,"lang":"en","type":"article","venue":"Living Histories A Past Studies Journal","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Transformative learning; Wage labour; Inequality; Work (physics); Psychological resilience; Resilience (materials science); Precarity; Feudalism; Division of labour","score_opus":0.013942224977061287,"score_gpt":0.3187950607249133,"score_spread":0.30485283574785205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414796309","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.50785303,0.031689644,0.0010155663,0.07458312,0.0022531068,0.000056165965,0.00074127415,0.00009277722,0.38171533],"genre_scores_gemma":[0.9483036,0.009822839,0.00019064073,0.0028014425,0.0004639934,0.000017118702,0.00018381781,0.000020997206,0.03819579],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99882704,0.00042975254,0.000052148327,0.00009442211,0.00021809539,0.0003784788],"domain_scores_gemma":[0.99803394,0.00053707295,0.0006041071,0.00015222929,0.00033238967,0.0003401742],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014788765,0.00021126484,0.00020906661,0.0014413705,0.0041315127,0.004469748,0.00046540418,0.0012059893,0.019321635],"category_scores_gemma":[0.0059789163,0.00014080547,0.00016047787,0.001635494,0.0044315895,0.0034388734,0.0040737325,0.001165732,0.0009846513],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030123678,0.00017800195,0.11454431,0.0007710525,0.00006946262,0.0032255342,0.17128275,0.00046924106,0.0009931722,0.31337044,0.10003119,0.29476365],"study_design_scores_gemma":[0.000010454618,0.000103748076,0.08379161,0.0010993953,0.00002030753,0.001304158,0.2767179,0.000116220705,0.00042915656,0.028991442,0.6073764,0.000039139653],"about_ca_topic_score_codex":0.008332397,"about_ca_topic_score_gemma":0.0126660345,"teacher_disagreement_score":0.019321635,"about_ca_system_score_codex":0.0023321696,"about_ca_system_score_gemma":0.0022686017,"threshold_uncertainty_score":0.06463736},"labels":[],"label_agreement":null},{"id":"W4415716098","doi":"10.1016/s0140-6736(25)02180-4","title":"Masking harm: dust, diseases, and industry","year":2025,"lang":"en","type":"article","venue":"The Lancet","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Masking (illustration); Plague (disease); Painting","score_opus":0.020335797023914023,"score_gpt":0.3169735287234474,"score_spread":0.2966377316995334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415716098","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0008410382,0.47088397,0.00049226085,0.49392867,0.021800801,0.000010255175,0.0001599282,0.000071855975,0.0118111735],"genre_scores_gemma":[0.062289868,0.46888974,0.001118894,0.34146792,0.092568,0.00006776789,0.00016570416,0.000054642387,0.033377513],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99729365,0.0010408362,0.00016173412,0.00020063858,0.000962472,0.00034061066],"domain_scores_gemma":[0.9929128,0.0033956121,0.0008549616,0.00037448126,0.0010079732,0.001454168],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034866752,0.0011754787,0.0014664871,0.0014839649,0.0017073157,0.0050623994,0.0008705586,0.01728158,0.020062735],"category_scores_gemma":[0.012285651,0.0005484434,0.00067682937,0.0012753299,0.0054776296,0.008002412,0.003106624,0.007773751,0.0045655025],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049882015,0.00013515835,0.0019632021,0.0024080144,0.00016252912,0.00036184638,0.00047535964,0.00030952573,0.0020174298,0.04488671,0.7039946,0.2427868],"study_design_scores_gemma":[0.00018945093,0.00021611538,0.006781543,0.0025828048,0.00007890662,0.00040593272,0.0017653095,0.00027142977,0.00030539912,0.09578444,0.8915476,0.000070982],"about_ca_topic_score_codex":0.0073105637,"about_ca_topic_score_gemma":0.0125228595,"teacher_disagreement_score":0.020062735,"about_ca_system_score_codex":0.0027904385,"about_ca_system_score_gemma":0.004510617,"threshold_uncertainty_score":0.06711656},"labels":[],"label_agreement":null},{"id":"W4416177367","doi":"10.1525/sla.2025.9.4.540","title":"Discovery and Dilemma","year":2025,"lang":"en","type":"article","venue":"Studies in Late Antiquity","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"","keywords":"Plague (disease); Dilemma; Suspect; Excavation; Yersinia pestis; Harm","score_opus":0.028320124805971122,"score_gpt":0.3782287187421502,"score_spread":0.34990859393617907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416177367","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0020648413,0.014006634,0.012497343,0.90526664,0.01183548,0.00006589969,0.00013028305,0.0001814352,0.053951576],"genre_scores_gemma":[0.22892722,0.027009882,0.037248462,0.6010838,0.030942569,0.00075921655,0.00045545807,0.0008955857,0.072677806],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"observational","domain_scores_codex":[0.9498495,0.024353541,0.0021676004,0.008913449,0.011767851,0.0029480786],"domain_scores_gemma":[0.91824913,0.051348135,0.0025828648,0.009739536,0.010326672,0.0077536134],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.07077285,0.0014010633,0.0020646348,0.0032957555,0.012198585,0.0142426295,0.0056480914,0.017695531,0.017355584],"category_scores_gemma":[0.118443444,0.0008955955,0.0012580077,0.0016465676,0.07241741,0.0431111,0.016087772,0.030847643,0.008753365],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000064314416,0.000049663315,0.000362852,0.00018409554,0.000029023911,0.00042931613,0.005380617,0.00015046663,0.00014640442,0.76526636,0.19375858,0.034178335],"study_design_scores_gemma":[0.000025820893,0.000025352065,0.00008671773,0.00034731335,0.0000067426404,0.0005450012,0.0038593407,0.00019552004,0.00009213192,0.51858383,0.47620136,0.000030812953],"about_ca_topic_score_codex":0.002958429,"about_ca_topic_score_gemma":0.0018730718,"teacher_disagreement_score":0.07077285,"about_ca_system_score_codex":0.008757045,"about_ca_system_score_gemma":0.014997001,"threshold_uncertainty_score":0.37428707},"labels":[],"label_agreement":null},{"id":"W4416615236","doi":"10.20944/preprints202511.1786.v1","title":"Zoonotic Barrier Disruption and the Rise of the Third Plague Pandemic: A One Health Analysis of 19th-Century Yunnan and the Emergence of Yersinia Pestis Strain 1.ORI","year":2025,"lang":"en","type":"preprint","venue":"Preprints.org","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Social Sciences and Humanities Research Council of Canada; University of Sussex; McGill University","keywords":"Yersinia pestis; Plague (disease); Pandemic; Public health; Population; Outbreak; Transmission (telecommunications); Global health; Malaria","score_opus":0.05394590003952968,"score_gpt":0.35523850867861506,"score_spread":0.30129260863908536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416615236","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99684924,0.00069480896,0.00029370165,0.00038758584,0.000007463509,0.000009318787,0.000092795046,0.000002332349,0.0016627554],"genre_scores_gemma":[0.999166,0.00041538157,0.0001353525,0.000032726453,0.000008118122,0.000004881083,0.00006751326,0.0000011306893,0.00016895313],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99972194,0.0001006011,0.000010932333,0.000040884213,0.000022201413,0.000103402395],"domain_scores_gemma":[0.9993586,0.00020683443,0.00021223063,0.000044524582,0.00008024084,0.00009760974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010950821,0.00035683572,0.00022892494,0.0015016928,0.0011764041,0.0011115957,0.0004265997,0.0005370657,0.002077659],"category_scores_gemma":[0.0012174718,0.00014194917,0.0007388231,0.0012048751,0.0015646532,0.0013525048,0.0014299789,0.00058616925,0.00006024553],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017127028,0.00010175628,0.95218986,0.00014033519,0.00019970641,0.001630471,0.010387816,0.002687258,0.0006398631,0.01464317,0.00034695948,0.016861532],"study_design_scores_gemma":[0.000009779931,0.00021529458,0.9556913,0.00011901778,0.00017943713,0.00035877316,0.028316233,0.0063124388,0.00030178754,0.0059062717,0.0025632076,0.000026334794],"about_ca_topic_score_codex":0.05034774,"about_ca_topic_score_gemma":0.049719926,"teacher_disagreement_score":0.05034774,"about_ca_system_score_codex":0.002719164,"about_ca_system_score_gemma":0.0016564408,"threshold_uncertainty_score":0.1001094},"labels":[],"label_agreement":null},{"id":"W4416985996","doi":"10.59277/aiix.62.07","title":"SURSE DOCUMENTARE PENTRU ISTORIA EPIDEMIILOR DE ALTĂDATĂ. „VIDOMOSTIILE” PRIVITOARE LA BOLNAVII ȘI MORȚII DE CIUMĂ DIN IAȘI (1829)","year":2025,"lang":"","type":"article","venue":"Anuarul Institutului de Istorie „A D Xenopol”","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Plague (disease); Quarter (Canadian coin); Context (archaeology); Period (music)","score_opus":0.005090771028163202,"score_gpt":0.3239634330563714,"score_spread":0.3188726620282082,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416985996","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09520984,0.23427953,0.002247722,0.016803386,0.015120966,0.00019968394,0.016962532,0.00066563854,0.6185107],"genre_scores_gemma":[0.46987528,0.10968597,0.0058340887,0.0020574688,0.005552351,0.00016043759,0.014426938,0.0004949235,0.39191252],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99956983,0.00009035364,0.000034851877,0.000081599144,0.00013988734,0.000083515966],"domain_scores_gemma":[0.9993575,0.00013922485,0.00014777195,0.000102528335,0.00019818834,0.00005471839],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006513477,0.00040715333,0.00026343114,0.0025076165,0.0014603421,0.0033794683,0.00034864995,0.00045876353,0.01960643],"category_scores_gemma":[0.0014911665,0.00022486507,0.00018891576,0.002520713,0.00083313824,0.00072146824,0.001444253,0.0010038175,0.0060466104],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002608149,0.0001036464,0.029978989,0.0026291942,0.000053981912,0.0015030821,0.022103019,0.00041429827,0.0047458173,0.050188687,0.44005695,0.44796142],"study_design_scores_gemma":[0.0000016593013,0.000010663588,0.010240312,0.00023552524,0.000004566159,0.00028982977,0.0009231991,0.000021660459,0.00032880722,0.0001663251,0.9877736,0.000003886574],"about_ca_topic_score_codex":0.037219305,"about_ca_topic_score_gemma":0.053944197,"teacher_disagreement_score":0.037219305,"about_ca_system_score_codex":0.0019028552,"about_ca_system_score_gemma":0.0025998938,"threshold_uncertainty_score":0.074005365},"labels":[],"label_agreement":null},{"id":"W6893105124","doi":"10.5281/zenodo.13461196","title":"An Assemblage of Fleas (Siphonaptera) From Canada, México, and the United States of America, in the Hastriter Collecton (Brigham Young University)","year":2023,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Flea; Listing (finance); Table (database); Assemblage (archaeology); Taxon","score_opus":0.014305070442677592,"score_gpt":0.22500217504997433,"score_spread":0.21069710460729674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6893105124","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.52964497,0.004949439,0.0008723124,0.00026087975,0.00008717582,0.0007768591,0.41464323,0.00038312847,0.048382033],"genre_scores_gemma":[0.51638776,0.010369149,0.009586866,0.0003799214,0.000071771035,0.00059239316,0.399688,0.00022643984,0.06269767],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998049,0.0000061045507,0.000019405772,0.000043724576,0.00008030822,0.00004557612],"domain_scores_gemma":[0.99937207,0.00003005917,0.00009648684,0.000031316293,0.00033819376,0.00013191368],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021567738,0.00044310038,0.00032611415,0.010954058,0.0023235315,0.0006758773,0.00034003684,0.00014445753,0.017267011],"category_scores_gemma":[0.00043481574,0.00027450072,0.00025560329,0.01110528,0.0002703085,0.0003659436,0.0006434127,0.00028467752,0.0025544795],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026923793,0.000053744207,0.6303514,0.0012509993,0.00026844838,0.0008702241,0.007906241,0.00017948441,0.010920793,0.0006245849,0.15419555,0.1931093],"study_design_scores_gemma":[0.0000039892266,0.0000150925025,0.9315829,0.000083137194,0.000027767703,0.00024185318,0.002045727,0.000028001507,0.00020881403,0.00001546971,0.065737754,0.000009442765],"about_ca_topic_score_codex":0.8387375,"about_ca_topic_score_gemma":0.9661035,"teacher_disagreement_score":0.16126251,"about_ca_system_score_codex":0.003244964,"about_ca_system_score_gemma":0.005295765,"threshold_uncertainty_score":0.3244244},"labels":[],"label_agreement":null},{"id":"W6893763176","doi":"10.5281/zenodo.4671428","title":"+27733404752 Powerful fast Revenge Spells ~ Punish Your Enemy, Death Revenge Spells Sweden, Portugal, Bulgaria","year":2021,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Spell; Circumstantial evidence; Context (archaeology); Mistake; Population; Guard (computer science)","score_opus":0.03665145194057585,"score_gpt":0.27682443804536533,"score_spread":0.2401729861047895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6893763176","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00210714,0.001107082,0.0003251506,0.003098453,0.0016073934,0.00013753767,0.0014981668,0.0014777136,0.9886413],"genre_scores_gemma":[0.0015619122,0.00029505667,0.000104850624,0.00041978125,0.000052880623,0.000019368152,0.00041064306,0.000202775,0.9969326],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99932945,0.00006588397,0.000030714662,0.00019222606,0.00016406974,0.00021764208],"domain_scores_gemma":[0.9971232,0.0001812191,0.000085435146,0.00010921862,0.00055140903,0.0019495029],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0005710927,0.0010406263,0.000774192,0.00087209453,0.0023700455,0.004987527,0.00079439086,0.0022311225,0.9444343],"category_scores_gemma":[0.0015949195,0.0004912101,0.0005064901,0.00077806634,0.00054367667,0.002053763,0.0037016056,0.001472592,0.8967117],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012073643,0.000060962586,0.0006523235,0.00015635724,0.0000036096735,0.00015783007,0.00013210482,0.00007039446,0.0007729693,0.00084265997,0.9033951,0.093634985],"study_design_scores_gemma":[0.000018074517,0.000043232372,0.0014713341,0.00011157216,0.000003648826,0.00017234239,0.00036710757,0.00005289899,0.00016694936,0.00013445342,0.997451,0.0000073426972],"about_ca_topic_score_codex":0.0040403334,"about_ca_topic_score_gemma":0.009291844,"teacher_disagreement_score":0.055565715,"about_ca_system_score_codex":0.0014616695,"about_ca_system_score_gemma":0.0023433184,"threshold_uncertainty_score":0.07925767},"labels":[],"label_agreement":null},{"id":"W6893764309","doi":"10.5281/zenodo.5054619","title":"Typhlopsylla fraterna Baker 1895","year":2006,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Microtus; Peromyscus; Sorex; Shrew","score_opus":0.014263700188234888,"score_gpt":0.2365677800075609,"score_spread":0.222304079819326,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6893764309","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6178046,0.044017404,0.0059369155,0.0011117788,0.0008122703,0.00060582475,0.008850459,0.0014089051,0.3194519],"genre_scores_gemma":[0.95149994,0.011646929,0.0036161921,0.00038967686,0.00017116986,0.00009309566,0.0029592414,0.000030345762,0.029593475],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99992454,0.0000039335887,0.0000062423906,0.00002252654,0.000019554085,0.00002323279],"domain_scores_gemma":[0.99986994,0.000012519994,0.00006535075,0.000008381224,0.000029324687,0.00001445731],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008415904,0.00086148694,0.00029475754,0.0011663268,0.00085679576,0.0003175975,0.00044131122,0.0004252497,0.018518753],"category_scores_gemma":[0.00025678013,0.00019834188,0.00015384085,0.0005588532,0.00031732177,0.0006388811,0.00061368564,0.00029835274,0.007664467],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008406619,0.00024200742,0.060266085,0.0017378116,0.0001042017,0.0040791617,0.0018191229,0.00059944444,0.08646592,0.0027740744,0.04621418,0.79485744],"study_design_scores_gemma":[0.00013564179,0.0011972693,0.4722586,0.0009724535,0.0001764203,0.018943196,0.002640965,0.00045206086,0.0094884,0.0009808422,0.49269503,0.000059173144],"about_ca_topic_score_codex":0.011917099,"about_ca_topic_score_gemma":0.014985532,"teacher_disagreement_score":0.018518753,"about_ca_system_score_codex":0.0006796492,"about_ca_system_score_gemma":0.00027279524,"threshold_uncertainty_score":0.0619514},"labels":[],"label_agreement":null},{"id":"W6903066829","doi":"10.7939/r3bc3sz7b","title":"Secular trends in the epidemiology of shingles in Alberta.","year":2007,"lang":"en","type":"article","venue":"University of Alberta Library","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Epidemiology; Shingles; Secular variation; Incidence (geometry)","score_opus":0.014917623351478851,"score_gpt":0.25413660801593424,"score_spread":0.2392189846644554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6903066829","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9609829,0.010469681,0.00023751771,0.0032735527,0.000095010044,0.000039056762,0.016007064,0.000115160336,0.008780048],"genre_scores_gemma":[0.98580235,0.0048175957,0.0002915122,0.0004371278,0.00003823564,0.000015191532,0.004297682,0.00001039442,0.0042901225],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99942493,0.000040036295,0.00004526404,0.00006598566,0.00018023234,0.00024351156],"domain_scores_gemma":[0.9985304,0.00007542622,0.00035487095,0.000034767192,0.00062404986,0.00038045636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046273283,0.00026230107,0.00026506622,0.0020360288,0.00096887647,0.0010814237,0.0011966879,0.0006356821,0.004260423],"category_scores_gemma":[0.0010173271,0.00025619616,0.0003123325,0.004287249,0.00063509075,0.00039499902,0.000686108,0.00067268766,0.0005272786],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016522323,0.000050623996,0.98101634,0.00012052914,0.00005682485,0.00020342467,0.00078211195,0.00027934185,0.0005212237,0.00033237803,0.004506621,0.011965223],"study_design_scores_gemma":[0.000003937944,0.000013681137,0.9976672,0.000032010965,0.000013109377,0.00009168081,0.0007513282,0.0001449732,0.000031879874,0.000018834127,0.001226395,0.0000051251745],"about_ca_topic_score_codex":0.9768729,"about_ca_topic_score_gemma":0.98449486,"teacher_disagreement_score":0.023127079,"about_ca_system_score_codex":0.011965302,"about_ca_system_score_gemma":0.01491027,"threshold_uncertainty_score":0.08681476},"labels":[],"label_agreement":null},{"id":"W6904908633","doi":"10.14288/1.0214560","title":"The Vancouver Medical Association Bulletin: May, 1925","year":2015,"lang":"en","type":"article","venue":"Open Collections","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Association (psychology); Impetigo; MEDLINE; Public health; Health care","score_opus":0.01802302708239086,"score_gpt":0.30502919111826476,"score_spread":0.2870061640358739,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6904908633","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.003531793,0.041331187,0.0003602262,0.072553225,0.082838684,0.00035062167,0.032032583,0.00067469606,0.76632696],"genre_scores_gemma":[0.003928235,0.005704885,0.00014271431,0.0033072967,0.0043613706,0.000048146358,0.002800676,0.00009156321,0.97961515],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994325,0.000038624552,0.0000445701,0.000082198356,0.00029731076,0.00010488475],"domain_scores_gemma":[0.99844164,0.0002081554,0.00007227634,0.000067998495,0.000872188,0.00033775793],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056321424,0.0011869752,0.0005445072,0.00284906,0.0028190329,0.0029767007,0.00090647844,0.0023872035,0.13248518],"category_scores_gemma":[0.0034979258,0.00057519367,0.00043843308,0.0033180271,0.0007816602,0.0009145849,0.00091747957,0.003888303,0.0780422],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002613296,0.000008924865,0.00041052484,0.00004687118,0.0000025733118,0.000046434234,0.000020491974,0.00003179949,0.00004594927,0.0003665917,0.988934,0.010059693],"study_design_scores_gemma":[0.0000052409137,0.0000066524485,0.003700512,0.000055580193,0.0000021334772,0.000026036772,0.00003195274,0.000019390265,0.000022290467,0.000074008145,0.99605113,0.000005103558],"about_ca_topic_score_codex":0.2334691,"about_ca_topic_score_gemma":0.5934028,"teacher_disagreement_score":0.7665309,"about_ca_system_score_codex":0.0035708635,"about_ca_system_score_gemma":0.004172558,"threshold_uncertainty_score":0.4642203},"labels":[],"label_agreement":null},{"id":"W6911742699","doi":"10.5281/zenodo.13863588","title":"Ouranosinc/xscen: v0.10.0","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ouranos","funders":"","keywords":"Mercator projection; Documentation; Oblique case; Argument (complex analysis); Schema (genetic algorithms)","score_opus":0.02135054355908361,"score_gpt":0.2636171381176503,"score_spread":0.2422665945585667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6911742699","genre_codex":"software","genre_gemma":"software","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"software","genre_consensus":"software","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00019073414,0.00041892877,0.020523714,0.00032488935,0.00069317827,0.0002366002,0.0372169,0.9022766,0.038118336],"genre_scores_gemma":[0.004857701,0.0007997821,0.01673587,0.0013063413,0.00024644972,0.001025788,0.10096073,0.8002312,0.07383611],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99721515,0.00036415987,0.00023208992,0.00052620843,0.0012147035,0.00044766892],"domain_scores_gemma":[0.9965724,0.0005194779,0.00011563758,0.0012945664,0.0011566995,0.00034138752],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0043369406,0.0067553995,0.0031779122,0.0026659805,0.0015479089,0.009604906,0.011927518,0.0051998235,0.6180805],"category_scores_gemma":[0.017288985,0.0056463513,0.0035633503,0.002998517,0.0018096657,0.009325832,0.009008765,0.0067808246,0.7789858],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018338996,0.00002360517,0.0001518633,0.00035993708,0.00003103362,0.00005953079,0.00007466542,0.00022710778,0.00044716254,0.0024115203,0.97830474,0.017725471],"study_design_scores_gemma":[0.00019559705,0.000029280705,0.00028584924,0.00027282795,0.00002112962,0.00013948436,0.000039025286,0.0009567604,0.002571267,0.0043660216,0.99101853,0.00010425755],"about_ca_topic_score_codex":0.013040003,"about_ca_topic_score_gemma":0.0057107164,"teacher_disagreement_score":0.6180805,"about_ca_system_score_codex":0.0037563737,"about_ca_system_score_gemma":0.0028848862,"threshold_uncertainty_score":0.5447618},"labels":[],"label_agreement":null},{"id":"W6912438917","doi":"10.5281/zenodo.5054672","title":"Peromyscopsylla ostsibirica Skalon 1936","year":2006,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Sorex; Microtus; Population; Recapitalization","score_opus":0.014628480495466773,"score_gpt":0.24105302662827918,"score_spread":0.2264245461328124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6912438917","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6677292,0.014015357,0.0036152056,0.00026912254,0.00026207388,0.0003100806,0.005582801,0.00042976692,0.30778635],"genre_scores_gemma":[0.95803946,0.005721789,0.002219957,0.00015248617,0.000071256094,0.0000738942,0.0028562204,0.000034441917,0.030830448],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99992883,0.000004762969,0.00000533587,0.00002789686,0.000017879343,0.000015218711],"domain_scores_gemma":[0.99990153,0.000008246912,0.000043145094,0.0000070268525,0.0000267917,0.000013158121],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000059491413,0.0005145626,0.00020548441,0.0011056551,0.00082559657,0.00027716075,0.00025754192,0.00021188112,0.012647819],"category_scores_gemma":[0.00013759217,0.00018873841,0.00014574899,0.00039706583,0.00029745238,0.00042211777,0.00050921453,0.00019717694,0.005087026],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010593085,0.00021698755,0.20077214,0.0012764352,0.00013950013,0.0017924913,0.0023892487,0.00077669404,0.14957796,0.0029741034,0.019046245,0.61997885],"study_design_scores_gemma":[0.000059505084,0.00028755917,0.75019675,0.0002955165,0.000103953935,0.0038422265,0.0010773252,0.0002438508,0.004070697,0.000401419,0.23939872,0.000022425234],"about_ca_topic_score_codex":0.017630814,"about_ca_topic_score_gemma":0.046418197,"teacher_disagreement_score":0.017630814,"about_ca_system_score_codex":0.0005502024,"about_ca_system_score_gemma":0.00034331263,"threshold_uncertainty_score":0.042311132},"labels":[],"label_agreement":null},{"id":"W6920628763","doi":"10.60692/zf3r6-neg87","title":"Host Resistance, Population Structure and the Long-Term Persistence of Bubonic Plague: Contributions of a Modelling Approach in the Malagasy Focus","year":2013,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Plague (disease); Metapopulation; Persistence (discontinuity); Host (biology); Population; Yersinia pestis; Zoonosis","score_opus":0.01788187525939764,"score_gpt":0.2196902717201734,"score_spread":0.20180839646077578,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6920628763","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96936834,0.0012964129,0.022645174,0.0015620255,0.000023612505,0.000029270497,0.00023629275,0.000054390213,0.004784598],"genre_scores_gemma":[0.9962734,0.0005659893,0.0020796747,0.000050928105,0.000029213523,0.000029721828,0.00005220444,0.000010574505,0.00090826495],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99979407,0.00013694866,0.000007499512,0.0000240507,0.000009912752,0.000027571687],"domain_scores_gemma":[0.99896073,0.0007275616,0.00018731208,0.000030691033,0.000039722945,0.00005391661],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005346177,0.0006003235,0.000414125,0.0007141832,0.0006184207,0.0013886992,0.00075889745,0.00085787615,0.001693734],"category_scores_gemma":[0.00250408,0.00023663639,0.00057187874,0.00054051547,0.0006920241,0.00084360316,0.0009063433,0.00048913946,0.00009054991],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007313781,0.0000984512,0.040578924,0.00009232427,0.00021806241,0.0004261122,0.00033011823,0.92833287,0.0016968601,0.022260064,0.0004849007,0.0054081073],"study_design_scores_gemma":[0.000012287842,0.000053026233,0.0079890415,0.000016584292,0.00006097958,0.000052680556,0.00012261792,0.9870544,0.00009041959,0.0038908217,0.0006431159,0.0000140622415],"about_ca_topic_score_codex":0.028679052,"about_ca_topic_score_gemma":0.014677447,"teacher_disagreement_score":0.028679052,"about_ca_system_score_codex":0.00093426264,"about_ca_system_score_gemma":0.0006014721,"threshold_uncertainty_score":0.05702424},"labels":[],"label_agreement":null},{"id":"W6924837510","doi":"10.15468/dl.yj5xzq","title":"Occurrence Download","year":2022,"lang":"en","type":"dataset","venue":"Global Biodiversity Information Facility","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Download; Matching (statistics); Range (aeronautics); Data set; Set (abstract data type)","score_opus":0.013396711993340719,"score_gpt":0.24937834952673504,"score_spread":0.23598163753339432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6924837510","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000054518074,0.000033326418,0.000042421645,0.000036465648,0.00001130207,0.0000057268185,0.99888605,0.00036101494,0.000569227],"genre_scores_gemma":[0.00017270586,0.000035753637,0.00019327977,0.000039719653,0.0000029674081,0.000036143196,0.99903893,0.0001061464,0.0003743808],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990792,0.00012758408,0.000114059025,0.00032678412,0.00020239851,0.00014998639],"domain_scores_gemma":[0.99797624,0.00059793313,0.00018980965,0.0004978852,0.00047777474,0.0002604291],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009607857,0.0022128304,0.0016163351,0.0049240757,0.0009999408,0.0025825237,0.0030042916,0.002371383,0.121597886],"category_scores_gemma":[0.0053372025,0.0008761737,0.0011969979,0.009224877,0.00047506165,0.002191693,0.002428494,0.0021608039,0.1788197],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042672862,0.000017046576,0.00052783004,0.00071545126,0.000021007154,0.000023658744,0.00002613166,0.00020962355,0.00015922381,0.0004553322,0.9961675,0.0016344802],"study_design_scores_gemma":[0.00009865871,0.0000097742295,0.0019239655,0.00020443964,0.000017157201,0.000044436452,0.00007519925,0.00023595893,0.00022947809,0.0008646627,0.9962768,0.000019462621],"about_ca_topic_score_codex":0.020113666,"about_ca_topic_score_gemma":0.03438549,"teacher_disagreement_score":0.8784021,"about_ca_system_score_codex":0.0016790167,"about_ca_system_score_gemma":0.0022679262,"threshold_uncertainty_score":0.40678543},"labels":[],"label_agreement":null},{"id":"W6926342814","doi":"10.25316/ir-14473","title":"The Nanaimo Free Press [Saturday, September 1, 1883]","year":2020,"lang":"en","type":"other","venue":"VIURRSpace (Vancouver Island University)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Free press; Free enterprise; Gloom; George (robot)","score_opus":0.009068181216786835,"score_gpt":0.22177080043705172,"score_spread":0.21270261922026487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926342814","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006759714,0.01623967,0.00019830624,0.0033934468,0.0066596163,0.00003610268,0.0019788335,0.0001846724,0.9706334],"genre_scores_gemma":[0.0008517224,0.0015166226,0.000050318347,0.00012772784,0.00018536534,0.000006190233,0.00019094348,0.00004700247,0.997024],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997793,0.000017446846,0.000009568199,0.000045545396,0.00010279919,0.000045316938],"domain_scores_gemma":[0.9998447,0.000017584262,0.000009846789,0.000011308882,0.00007178988,0.000044787677],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002351587,0.0010376386,0.000526829,0.0016139984,0.0024857009,0.0030461315,0.00071094267,0.0012731283,0.30691025],"category_scores_gemma":[0.0008014579,0.00039862082,0.00032962748,0.002131369,0.00053827494,0.0014553415,0.0010796115,0.0018697628,0.13258928],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035626523,0.000008676701,0.00018324266,0.00007745114,0.0000038064986,0.000082874285,0.00007845698,0.0000704802,0.00014611456,0.007857507,0.9392017,0.05225397],"study_design_scores_gemma":[0.000001372069,0.0000022392785,0.00026419773,0.000026957932,5.806383e-7,0.00001561481,0.000015980166,0.000009712124,0.000020372701,0.000233716,0.99940765,0.000001585261],"about_ca_topic_score_codex":0.058784477,"about_ca_topic_score_gemma":0.2687198,"teacher_disagreement_score":0.6930897,"about_ca_system_score_codex":0.0022050668,"about_ca_system_score_gemma":0.0014724481,"threshold_uncertainty_score":0.9886084},"labels":[],"label_agreement":null},{"id":"W6926369444","doi":"10.25316/ir-14682","title":"The Nanaimo Free Press [Wednesday, October 22, 1884]","year":2020,"lang":"en","type":"other","venue":"VIUSpace (Vancouver Island University Library)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Gloom; Free press; Free enterprise","score_opus":0.007281483599824168,"score_gpt":0.20464215012455064,"score_spread":0.19736066652472647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926369444","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00060650357,0.010015559,0.00013694132,0.001605709,0.0030205229,0.00003021136,0.0019292952,0.00014829074,0.98250705],"genre_scores_gemma":[0.0007537069,0.0011799262,0.000046671008,0.000071808354,0.00009013488,0.000006660987,0.00019522179,0.00004477226,0.99761105],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99978834,0.000016392913,0.000008700201,0.00004251925,0.000099512705,0.000044521556],"domain_scores_gemma":[0.99984,0.000019644802,0.000008777056,0.000012333517,0.00007247808,0.00004671421],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00023000836,0.0011437099,0.000536843,0.0020781355,0.0031375221,0.0036970782,0.0007630268,0.001188154,0.33549044],"category_scores_gemma":[0.00080730586,0.00048729128,0.00029310305,0.0030522167,0.0006326875,0.0015013416,0.0010994833,0.0020284923,0.14127037],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033345495,0.000010108508,0.00023038407,0.000096894495,0.0000035609903,0.00009971726,0.00014939968,0.00007331096,0.00015523439,0.010260876,0.92830503,0.060582127],"study_design_scores_gemma":[0.0000014548203,0.0000023434209,0.0003603408,0.00003450907,6.960541e-7,0.000017844111,0.000027937904,0.000009579871,0.000024504878,0.00027955644,0.9992392,0.0000019311306],"about_ca_topic_score_codex":0.09858314,"about_ca_topic_score_gemma":0.41411582,"teacher_disagreement_score":0.90141684,"about_ca_system_score_codex":0.0029270505,"about_ca_system_score_gemma":0.0019960753,"threshold_uncertainty_score":0.94784224},"labels":[],"label_agreement":null},{"id":"W6926466613","doi":"10.25384/sage.21919610","title":"sj-pdf-1-cjk-10.1177_20543581221150553 – Supplemental material for Adapting an Objective Structured Clinical Examination (OSCE) on Conducting Difficult Conversations Between Nephrology Fellows and Patients to a Virtual Platform: A Research Letter","year":2023,"lang":"en","type":"article","venue":"Sage Journals Data","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Nephrology; Physical examination; Kidney disease; MEDLINE; Disease","score_opus":0.19918339669534302,"score_gpt":0.44295535279055215,"score_spread":0.24377195609520913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926466613","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0030298242,0.0011125185,0.0036516609,0.2652199,0.05507807,0.0014892276,0.028055381,0.0099011175,0.6324623],"genre_scores_gemma":[0.012295467,0.00085742056,0.004188054,0.09927816,0.010437689,0.00083998416,0.010264908,0.0018690791,0.8599692],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9974935,0.0006429472,0.0003235786,0.00019186374,0.0010247924,0.00032338637],"domain_scores_gemma":[0.96614486,0.016516142,0.0012078093,0.0015017088,0.00904692,0.0055826227],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0038068967,0.00047826034,0.00063122326,0.0010395438,0.0016909015,0.0035193777,0.0017077666,0.0072580245,0.75601685],"category_scores_gemma":[0.031205256,0.00044988416,0.00039865632,0.00075471017,0.00079718145,0.0021478431,0.0017607295,0.0050469968,0.513996],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004523134,0.000044645156,0.00009830711,0.000024038065,8.2197977e-7,0.00007712733,0.00001242259,0.000009925957,0.00012528067,0.00019061129,0.9924924,0.0068791998],"study_design_scores_gemma":[0.00008546526,0.000066318564,0.001046702,0.00013418468,0.0000028472775,0.00030665597,0.00012400707,0.00014906088,0.00030781215,0.0005355696,0.9972198,0.000021615495],"about_ca_topic_score_codex":0.006442301,"about_ca_topic_score_gemma":0.011335542,"teacher_disagreement_score":0.75601685,"about_ca_system_score_codex":0.0020036222,"about_ca_system_score_gemma":0.0025123237,"threshold_uncertainty_score":0.34801233},"labels":[],"label_agreement":null},{"id":"W6926550304","doi":"10.25392/leicester.data.27880083.v1","title":"The Many Faces of Court-Connected Non-Adjudicative ADR in Civil and Commercial Cases: A Comparative Study Across England and Wales, Ontario, Italy, and Turkey","year":2024,"lang":"en","type":"dissertation","venue":"Figshare","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Economic Justice; Alternative dispute resolution; Dispute resolution; Civil society; Dispute mechanism; Power (physics); Inequality; Law reform","score_opus":0.03055890878175882,"score_gpt":0.34490593046319185,"score_spread":0.314347021681433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926550304","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9777765,0.0015998711,0.00009834735,0.00081042264,0.000019083112,0.00005255557,0.000066580375,0.0000017510521,0.01957491],"genre_scores_gemma":[0.994466,0.0010905849,0.00007811519,0.00028924644,0.000009459031,0.000031092055,0.000072271,0.0000055300943,0.003957682],"study_design_codex":"qualitative","study_design_gemma":"observational","domain_scores_codex":[0.99413437,0.0016180502,0.00033000714,0.00048421108,0.0013275312,0.0021057916],"domain_scores_gemma":[0.99176943,0.0029961567,0.0016497314,0.0004660742,0.0019727629,0.0011457937],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00400554,0.00020367054,0.0005932463,0.002827501,0.0078077912,0.0046608956,0.001569611,0.0011561734,0.0038889407],"category_scores_gemma":[0.009739,0.0004927684,0.00030612893,0.0058914567,0.008290152,0.0023224265,0.0035372253,0.0012693331,0.000404082],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026801846,0.00016805645,0.14925803,0.0007311839,0.0000666176,0.008804861,0.7746964,0.00020276853,0.0012478116,0.026256,0.004804944,0.033495296],"study_design_scores_gemma":[0.000012418819,0.00005970227,0.30266753,0.00026937894,0.000027777933,0.0009746835,0.6599604,0.00009315891,0.00013231942,0.00034540915,0.035421383,0.00003587731],"about_ca_topic_score_codex":0.7664071,"about_ca_topic_score_gemma":0.9381158,"teacher_disagreement_score":0.23359293,"about_ca_system_score_codex":0.040972598,"about_ca_system_score_gemma":0.022765,"threshold_uncertainty_score":0.4699372},"labels":[],"label_agreement":null},{"id":"W6926553361","doi":"10.25549/impa-m68786","title":"Missionary father guiding a dog-drawn plow over a field, Canada, ca.1920-1940","year":2012,"lang":"en","type":"dataset","venue":"University of Southern California Digital Library","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Plough; Work (physics); Notice","score_opus":0.008055681852203952,"score_gpt":0.19548338661791104,"score_spread":0.18742770476570708,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926553361","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00017904755,0.00008752592,0.00001844594,0.000051932173,0.000013204197,0.0000037074083,0.9985696,0.000054060227,0.0010224653],"genre_scores_gemma":[0.0010661718,0.00016284209,0.00010966555,0.00003579152,0.00000686548,0.000021474572,0.99537694,0.000026959562,0.003193282],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99943334,0.00004314596,0.00005317373,0.00016787375,0.00018833899,0.000114103466],"domain_scores_gemma":[0.99730104,0.0003866096,0.00027689224,0.00029911622,0.0013182394,0.0004181851],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005349113,0.0011263883,0.00092832686,0.003067045,0.0014297672,0.0020433704,0.0016519789,0.0009279917,0.0475912],"category_scores_gemma":[0.004563256,0.0004839256,0.00048928126,0.009606725,0.00036905482,0.0007659697,0.0009586507,0.0010542013,0.030152064],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049893995,0.000006475067,0.0020791902,0.00028491343,0.000014033456,0.000017491036,0.000024554434,0.00010913763,0.000027059095,0.00022912878,0.9950003,0.0021577661],"study_design_scores_gemma":[0.00007855107,0.000005288882,0.020607075,0.00027882683,0.000025498153,0.000028350456,0.0001420389,0.00014430293,0.00017084049,0.00020971459,0.978292,0.000017565819],"about_ca_topic_score_codex":0.7353225,"about_ca_topic_score_gemma":0.89518636,"teacher_disagreement_score":0.26467752,"about_ca_system_score_codex":0.004827284,"about_ca_system_score_gemma":0.012691894,"threshold_uncertainty_score":0.5324725},"labels":[],"label_agreement":null},{"id":"W6927004138","doi":"10.25549/webster-c100-13189","title":"Sourcebook of Criminal Justice Statistics, 1990, 1991","year":2021,"lang":"en","type":"dataset","venue":"University of Southern California Digital Library","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Commission; Criminal justice; Law enforcement; Economic Justice; Newspaper; Criminal justice ethics; Criminal law","score_opus":0.008829736703704925,"score_gpt":0.20469745915954424,"score_spread":0.1958677224558393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6927004138","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000867768,0.000029809962,0.000040352308,0.000039003302,0.000011124137,0.000007888638,0.99905807,0.00008789354,0.0006390764],"genre_scores_gemma":[0.0002756687,0.000065582106,0.00016700932,0.000018919807,0.000006042066,0.000052806623,0.9984079,0.000033992117,0.00097213633],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99764496,0.00025856335,0.00047441348,0.00044153573,0.0009482204,0.0002322821],"domain_scores_gemma":[0.9905786,0.0014801172,0.0010489523,0.0012984786,0.0050773704,0.0005164713],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018324779,0.0014755194,0.0013214691,0.0078060883,0.00090279157,0.0029173791,0.0019661945,0.0007666686,0.057811286],"category_scores_gemma":[0.015910901,0.001021861,0.0005439135,0.0217369,0.0002637327,0.0016068836,0.0014089033,0.0021518366,0.102045365],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015140423,0.000008792387,0.0012804451,0.000108310946,0.000011021439,0.000007838181,0.000011512055,0.00011528145,0.000011517787,0.00033654372,0.9949681,0.0031254657],"study_design_scores_gemma":[0.00013414049,0.000013195299,0.022051472,0.00019970564,0.000023812936,0.000060787126,0.00008618106,0.00037819106,0.00014776859,0.00073942693,0.9761415,0.000023824452],"about_ca_topic_score_codex":0.1178425,"about_ca_topic_score_gemma":0.09924526,"teacher_disagreement_score":0.1178425,"about_ca_system_score_codex":0.0035694065,"about_ca_system_score_gemma":0.0074945143,"threshold_uncertainty_score":0.23431313},"labels":[],"label_agreement":null},{"id":"W6929522185","doi":"10.48550/arxiv.1605.06637","title":"Red, Straight, no bends: primordial power spectrum reconstruction from CMB and large-scale structure","year":2016,"lang":"en","type":"preprint","venue":"arXiv (Cornell University)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Cosmic microwave background; Spectral density; Cosmology; Sky; Power law; Planck; Galaxy; Tilt (camera); Smoothing","score_opus":0.01676610966821522,"score_gpt":0.1885296854972867,"score_spread":0.17176357582907148,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929522185","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.501273,0.00028946254,0.49065617,0.00038270233,0.00004434434,0.00001758236,0.0010994264,0.0022523017,0.0039849607],"genre_scores_gemma":[0.94040656,0.00010982853,0.057408478,0.000038308724,0.000021732314,0.00001015178,0.001021094,0.0003665283,0.00061732583],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9998534,0.00004724373,0.0000045687443,0.00004094199,0.00003067522,0.000023272469],"domain_scores_gemma":[0.9990822,0.0003079465,0.00013906974,0.00029794982,0.00007568088,0.00009718359],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008250614,0.00037109686,0.00020501882,0.0009471095,0.00021835363,0.00095742947,0.0005639919,0.00058918126,0.0017864378],"category_scores_gemma":[0.004597808,0.00047866852,0.0005698699,0.0006657255,0.0005527402,0.0006697662,0.0005832651,0.0007417455,0.00050469325],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006604347,0.00010896846,0.095890336,0.00017890462,0.00029786315,0.0007143638,0.0006504434,0.6373484,0.051223602,0.07335726,0.0045861187,0.13498329],"study_design_scores_gemma":[0.000028292156,0.000025883333,0.023993494,0.0000129102755,0.000017139682,0.00015419362,0.0000587872,0.9263312,0.0034085421,0.043877862,0.002039417,0.000052268322],"about_ca_topic_score_codex":0.0027674418,"about_ca_topic_score_gemma":0.0021405658,"teacher_disagreement_score":0.0027674418,"about_ca_system_score_codex":0.00029968462,"about_ca_system_score_gemma":0.00032741256,"threshold_uncertainty_score":0.0059762597},"labels":[],"label_agreement":null},{"id":"W6929911764","doi":"10.5281/zenodo.10028217","title":"Calibration Weights and Standard Error Estimate for the Quarterly Tax Survey (Q-Tax)","year":2023,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Calibration; Estimator; Standard error; Linear regression; Ordinary least squares; Revenue; Regression analysis; Survey data collection; Quarter (Canadian coin)","score_opus":0.028440859016191325,"score_gpt":0.28543207879420307,"score_spread":0.25699121977801176,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929911764","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10303208,0.0012712645,0.75748515,0.0024590907,0.002058715,0.005555547,0.06538476,0.0023919384,0.06036137],"genre_scores_gemma":[0.37137377,0.0011866016,0.5000556,0.00089667155,0.0005864188,0.010640666,0.07630002,0.0014017872,0.037558425],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.97285044,0.01369156,0.0018695655,0.0027872229,0.008105493,0.00069571246],"domain_scores_gemma":[0.93819857,0.020946728,0.009381313,0.0119479885,0.019215502,0.00030994773],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.035974804,0.0008923928,0.0007788534,0.0048293485,0.0008174232,0.0014323941,0.0016349248,0.0013846403,0.013668248],"category_scores_gemma":[0.16712333,0.0005673141,0.0010983151,0.0073353266,0.0007836941,0.001575293,0.0019266631,0.0022419004,0.0062813424],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030362883,0.00049222854,0.18867153,0.00040327493,0.00052448,0.00009699721,0.0011007483,0.023020582,0.0012303396,0.11128535,0.22528127,0.4475896],"study_design_scores_gemma":[0.00023334322,0.0006330128,0.396756,0.00074012764,0.00038794804,0.0006328854,0.0018216907,0.080451906,0.00949133,0.060357984,0.4481785,0.00031533034],"about_ca_topic_score_codex":0.011724136,"about_ca_topic_score_gemma":0.0070420294,"teacher_disagreement_score":0.035974804,"about_ca_system_score_codex":0.0014921458,"about_ca_system_score_gemma":0.0017650302,"threshold_uncertainty_score":0.19025522},"labels":[],"label_agreement":null},{"id":"W6931404731","doi":"10.5281/zenodo.4857793","title":"[Download~^Mp3] Grand Corps Malade - 3ème temps Album Download","year":2021,"lang":"fr","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Nucleofection; Gestational period; TSG101; Dysgeusia; Liquation; Diafiltration; Hyporeflexia; Fusible alloy; Demotion","score_opus":0.019600920250675495,"score_gpt":0.24357998014842402,"score_spread":0.22397905989774852,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931404731","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00059708575,0.00046944455,0.0035206396,0.00060708105,0.0008478259,0.00021738779,0.12492005,0.09214188,0.77667856],"genre_scores_gemma":[0.0031150868,0.00043533358,0.0025133544,0.00049341563,0.00019609224,0.00024291898,0.077856936,0.04484493,0.87030196],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99976903,0.00001855959,0.000008974712,0.000050791215,0.000105064544,0.000047537294],"domain_scores_gemma":[0.9989942,0.0001163855,0.000038581555,0.00020084638,0.00039688207,0.00025311054],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003227945,0.0017520724,0.0009310982,0.00163102,0.0011820755,0.004030144,0.0015746586,0.0010469866,0.9116228],"category_scores_gemma":[0.0022160427,0.00080043555,0.0008989641,0.0020742943,0.00027608708,0.0036305978,0.0030329535,0.0011835165,0.9124593],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002621084,0.0000062244335,0.000055056487,0.00006735171,0.0000022108768,0.00001659192,0.000016873131,0.000018982699,0.00012111428,0.00027361495,0.98279667,0.016599117],"study_design_scores_gemma":[0.000012606614,0.000008004628,0.00046314602,0.00003977733,0.0000025503525,0.00003655583,0.000020176592,0.0000646933,0.00030840142,0.00028931792,0.99874216,0.000012680697],"about_ca_topic_score_codex":0.008780524,"about_ca_topic_score_gemma":0.010571017,"teacher_disagreement_score":0.08837718,"about_ca_system_score_codex":0.00096434366,"about_ca_system_score_gemma":0.00050736085,"threshold_uncertainty_score":0.12605935},"labels":[],"label_agreement":null},{"id":"W6943781769","doi":"10.17863/cam.58040","title":"Phylogeography of the second plague pandemic revealed through analysis of historical Yersinia pestis genomes","year":2018,"lang":"en","type":"article","venue":"Apollo (University of Cambridge)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"European Regional Development Fund; Max-Planck-Gesellschaft; European Commission; Queen's University; Eesti Teadusagentuur; Wellcome Trust; University of Bern","keywords":"Yersinia pestis; Plague (disease); Pandemic; Genome; Clade; Genetic diversity; Phylogeography; Lineage (genetic)","score_opus":0.012927717084470587,"score_gpt":0.23402129553058443,"score_spread":0.22109357844611385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6943781769","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985734,0.00024051355,0.00032213808,0.000019641333,0.0000014632093,0.0000026975752,0.0004160349,0.0000049772298,0.0004190892],"genre_scores_gemma":[0.9981304,0.0001890271,0.00040594683,0.000010733295,0.0000029346777,0.0000034086972,0.0010700008,0.0000045181555,0.00018314357],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99989843,0.000019048879,0.0000060672664,0.000042839343,0.00001047672,0.000023079983],"domain_scores_gemma":[0.9997669,0.000067681474,0.00007510341,0.000024881034,0.000032970504,0.000032457054],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031305154,0.00013910502,0.00019531252,0.0014751217,0.0003649872,0.0005956191,0.00010309298,0.00025449926,0.0011865834],"category_scores_gemma":[0.00046049216,0.00012072927,0.00023874194,0.001373991,0.00024157114,0.0002441639,0.0005011848,0.0002841617,0.00019434726],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010900494,0.000070196045,0.82842135,0.00018151071,0.00038611065,0.0008319686,0.003827731,0.0020515935,0.1339353,0.0011625013,0.0005834738,0.027458193],"study_design_scores_gemma":[0.000008325285,0.00005652988,0.99343514,0.000029885787,0.000057750036,0.0005980869,0.0007157371,0.0010661788,0.001598993,0.00018941179,0.0022353875,0.000008445445],"about_ca_topic_score_codex":0.0018322145,"about_ca_topic_score_gemma":0.0025861533,"teacher_disagreement_score":0.0018322145,"about_ca_system_score_codex":0.0001950903,"about_ca_system_score_gemma":0.00013014644,"threshold_uncertainty_score":0.0039694905},"labels":[],"label_agreement":null},{"id":"W6949750982","doi":"10.5281/zenodo.15707801","title":"Siphonaptera","year":2025,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal British Columbia Museum; University of Manitoba; University of Alberta","funders":"","keywords":"Spermatheca; Midden; Porpoise; Hook; Fish <Actinopterygii>","score_opus":0.015619481818617414,"score_gpt":0.2610752295422159,"score_spread":0.2454557477235985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6949750982","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9163796,0.0029437356,0.0021943129,0.00011898786,0.00013774206,0.00019921301,0.0042559328,0.0006256562,0.07314491],"genre_scores_gemma":[0.96846056,0.00086270325,0.003044857,0.00028054882,0.00005738616,0.0001379652,0.003298504,0.000055903274,0.023801481],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.999874,0.000006851984,0.000013351358,0.0000644943,0.000027900174,0.000013458462],"domain_scores_gemma":[0.9998919,0.000017185794,0.000030313346,0.000015637432,0.000023047303,0.000021997826],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012332188,0.00055868545,0.00032173333,0.0014597559,0.0011066599,0.0003532754,0.0003507558,0.00042154134,0.014478873],"category_scores_gemma":[0.00024341195,0.00021662709,0.00023881093,0.0005572503,0.0004225107,0.0005983373,0.0007165816,0.00031271062,0.0040098648],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019588454,0.000317928,0.17291024,0.0031232897,0.00027912253,0.0034129457,0.0060484945,0.00227364,0.27970782,0.003103129,0.012322537,0.514542],"study_design_scores_gemma":[0.00006095007,0.00056786987,0.89086866,0.00026117617,0.00014189925,0.005208347,0.0016514069,0.0006895192,0.0061399443,0.0007581971,0.09360318,0.000048947113],"about_ca_topic_score_codex":0.0036810068,"about_ca_topic_score_gemma":0.009024543,"teacher_disagreement_score":0.014478873,"about_ca_system_score_codex":0.00042244385,"about_ca_system_score_gemma":0.0001948895,"threshold_uncertainty_score":0.04843664},"labels":[],"label_agreement":null},{"id":"W6949905733","doi":"10.5281/zenodo.4671430","title":"+27733404752 Powerful fast Revenge Spells ~ Punish Your Enemy, Death Revenge Spells Sweden, Portugal","year":2021,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Spell; Circumstantial evidence; Context (archaeology); Population; Mistake; Hot work","score_opus":0.03624868718538682,"score_gpt":0.2771801533885958,"score_spread":0.240931466203209,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6949905733","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012714748,0.00068010425,0.00037508062,0.0032564006,0.00170979,0.00009261311,0.00084358535,0.0015740648,0.99019694],"genre_scores_gemma":[0.0012193375,0.00026948735,0.00012637643,0.00043010846,0.0000822704,0.000016701704,0.00026465862,0.00025747964,0.99733365],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99913365,0.00009609489,0.000038996917,0.0002104688,0.00030039923,0.00022053934],"domain_scores_gemma":[0.99636,0.00026815958,0.00013924293,0.0001731976,0.00074235036,0.0023170512],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0006870974,0.0010459129,0.0007335533,0.00082115113,0.002879846,0.0058296267,0.00092572975,0.002583654,0.9419867],"category_scores_gemma":[0.0023143047,0.0005672297,0.00064755714,0.0006731639,0.0005646928,0.0023746116,0.004070327,0.0016897644,0.8838865],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008531792,0.000055003922,0.0003227286,0.00010759575,0.0000027669987,0.00013692061,0.0001040793,0.000045614725,0.00056887674,0.00082107884,0.9390471,0.058702875],"study_design_scores_gemma":[0.000015251048,0.000033387463,0.0006272063,0.00008194441,0.0000030070935,0.00018085328,0.00025343188,0.000043035554,0.00015699549,0.00016281429,0.99843544,0.000006692519],"about_ca_topic_score_codex":0.0025420662,"about_ca_topic_score_gemma":0.007159815,"teacher_disagreement_score":0.05801332,"about_ca_system_score_codex":0.0013507078,"about_ca_system_score_gemma":0.0021079658,"threshold_uncertainty_score":0.08274889},"labels":[],"label_agreement":null},{"id":"W6949974745","doi":"10.5281/zenodo.5054618","title":"Typhlopsylla fraterna Baker 1895","year":2006,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Microtus; Peromyscus; Sorex; Shrew","score_opus":0.014263700188234888,"score_gpt":0.2365677800075609,"score_spread":0.222304079819326,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6949974745","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6178046,0.044017404,0.0059369155,0.0011117788,0.0008122703,0.00060582475,0.008850459,0.0014089051,0.3194519],"genre_scores_gemma":[0.95149994,0.011646929,0.0036161921,0.00038967686,0.00017116986,0.00009309566,0.0029592414,0.000030345762,0.029593475],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99992454,0.0000039335887,0.0000062423906,0.00002252654,0.000019554085,0.00002323279],"domain_scores_gemma":[0.99986994,0.000012519994,0.00006535075,0.000008381224,0.000029324687,0.00001445731],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008415904,0.00086148694,0.00029475754,0.0011663268,0.00085679576,0.0003175975,0.00044131122,0.0004252497,0.018518753],"category_scores_gemma":[0.00025678013,0.00019834188,0.00015384085,0.0005588532,0.00031732177,0.0006388811,0.00061368564,0.00029835274,0.007664467],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008406619,0.00024200742,0.060266085,0.0017378116,0.0001042017,0.0040791617,0.0018191229,0.00059944444,0.08646592,0.0027740744,0.04621418,0.79485744],"study_design_scores_gemma":[0.00013564179,0.0011972693,0.4722586,0.0009724535,0.0001764203,0.018943196,0.002640965,0.00045206086,0.0094884,0.0009808422,0.49269503,0.000059173144],"about_ca_topic_score_codex":0.011917099,"about_ca_topic_score_gemma":0.014985532,"teacher_disagreement_score":0.018518753,"about_ca_system_score_codex":0.0006796492,"about_ca_system_score_gemma":0.00027279524,"threshold_uncertainty_score":0.0619514},"labels":[],"label_agreement":null},{"id":"W6950166678","doi":"10.5281/zenodo.3267012","title":"PRACTICAL ASPECTS OF THE IMPLEMENTATION OF THE EPIDEMIOLOGical SUPERVISION OF TRANSMITTED DISEASES IN AREAS OF RISK","year":2019,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Transportation of Ontario","funders":"","keywords":"Epidemiology; Christian ministry; Epidemiological surveillance; Public health; International Health Regulations; Disease surveillance; Cover (algebra); Control (management)","score_opus":0.02263889608370237,"score_gpt":0.3013139291504545,"score_spread":0.2786750330667521,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6950166678","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09818118,0.045848403,0.14536451,0.39356676,0.0070899962,0.012350989,0.001159554,0.0026359267,0.29380265],"genre_scores_gemma":[0.6481495,0.040506877,0.21455882,0.025652278,0.005426896,0.004186082,0.0017299781,0.00024639646,0.05954314],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.979227,0.013101336,0.0012934864,0.0008106347,0.0036977122,0.0018697375],"domain_scores_gemma":[0.9713836,0.007620477,0.002844938,0.0024814797,0.008257644,0.0074118776],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.023729293,0.0009239035,0.00050165656,0.0022676575,0.0023456304,0.0033288272,0.002553718,0.00288911,0.015571854],"category_scores_gemma":[0.025819851,0.00042918022,0.0007977746,0.00069846865,0.0019139351,0.0027886224,0.0068368944,0.0035204412,0.0035507877],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030748223,0.0013880692,0.034063008,0.0030252195,0.00008098084,0.0034326715,0.0099402405,0.0037599625,0.0075045223,0.015280467,0.10743345,0.81378406],"study_design_scores_gemma":[0.00020860827,0.0016543457,0.16547605,0.008965391,0.00011906403,0.0055574155,0.02573383,0.0038347556,0.0053372206,0.031254835,0.7514965,0.00036193326],"about_ca_topic_score_codex":0.008018037,"about_ca_topic_score_gemma":0.00559512,"teacher_disagreement_score":0.023729293,"about_ca_system_score_codex":0.001935906,"about_ca_system_score_gemma":0.02171593,"threshold_uncertainty_score":0.125494},"labels":[],"label_agreement":null},{"id":"W6950798550","doi":"10.5282/rcc/7029","title":"The Plague of Provence: Early Advances in the Centralization of Crisis Management","year":2018,"lang":"en","type":"article","venue":"Universitätsbibliothek der LMU","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge","funders":"","keywords":"Plague (disease); Context (archaeology); Crisis management; Outbreak; Pandemic; Style (visual arts)","score_opus":0.005318257205854993,"score_gpt":0.2680562339955869,"score_spread":0.26273797678973193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6950798550","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.017670818,0.1498032,0.028002685,0.6947193,0.0038565232,0.000091604765,0.00008497125,0.0002593525,0.10551152],"genre_scores_gemma":[0.7947735,0.09422229,0.019556608,0.06768832,0.0060880175,0.00020964244,0.00009010343,0.00016723131,0.017204387],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9942624,0.0024462861,0.00024210542,0.00061264384,0.0013428429,0.0010936024],"domain_scores_gemma":[0.97735834,0.0151259955,0.0016382168,0.0015058893,0.0032216362,0.0011498419],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.016912907,0.0007562894,0.0007260224,0.002686645,0.0036089919,0.011578422,0.0019295793,0.0055427607,0.003353068],"category_scores_gemma":[0.020053683,0.0003770485,0.00044183584,0.0022284226,0.017353037,0.011736069,0.007155749,0.009701213,0.00048603993],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012326014,0.00005943482,0.0013724101,0.00047459762,0.00003652546,0.0003650554,0.0054699853,0.0015546224,0.0007400717,0.83256096,0.02742484,0.12981816],"study_design_scores_gemma":[0.000045282784,0.00015791084,0.0054697446,0.0017823022,0.000016906344,0.00024351092,0.004561475,0.0018362709,0.0021146035,0.3161656,0.66750515,0.00010119612],"about_ca_topic_score_codex":0.015523157,"about_ca_topic_score_gemma":0.01958563,"teacher_disagreement_score":0.016912907,"about_ca_system_score_codex":0.015970306,"about_ca_system_score_gemma":0.016543368,"threshold_uncertainty_score":0.11587322},"labels":[],"label_agreement":null},{"id":"W6954908000","doi":"10.57745/bxqlsz","title":"2D_dataset.zip","year":2025,"lang":"en","type":"dataset","venue":"Recherche Data Gouv France","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Identification (biology); Process (computing); Term (time); Context (archaeology)","score_opus":0.1521282538989979,"score_gpt":0.4360284629377997,"score_spread":0.28390020903880175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6954908000","genre_codex":"dataset","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000099521145,0.00007339671,0.00010328488,0.000057591606,0.000021991877,0.000008971367,0.99830484,0.00076080946,0.000569582],"genre_scores_gemma":[0.00033507744,0.00005470758,0.00037933377,0.000056306708,0.000005732279,0.000045494184,0.99849224,0.00018305155,0.00044800653],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987669,0.00022502082,0.000105883264,0.00047218683,0.00026040786,0.00016963964],"domain_scores_gemma":[0.9979119,0.00073959015,0.00013202518,0.0005399456,0.0004565064,0.00022004878],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013588144,0.0034357063,0.0024725373,0.0035588886,0.0014669473,0.0034501741,0.004360916,0.0034282194,0.14688857],"category_scores_gemma":[0.006383604,0.001098119,0.00224687,0.0063334755,0.00065574725,0.0018310046,0.0024163818,0.002543388,0.14938636],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011826456,0.000030729203,0.00043950253,0.000813165,0.00007257095,0.000027855456,0.000020760579,0.00052757224,0.00027210303,0.0005992644,0.9953483,0.0017299575],"study_design_scores_gemma":[0.00059074804,0.000033833643,0.0021935739,0.00023369475,0.00008779145,0.000090381174,0.000055753266,0.0011662516,0.00082646485,0.0032244695,0.99144167,0.000055252065],"about_ca_topic_score_codex":0.01941938,"about_ca_topic_score_gemma":0.029471153,"teacher_disagreement_score":0.85311145,"about_ca_system_score_codex":0.0018175616,"about_ca_system_score_gemma":0.0026820644,"threshold_uncertainty_score":0.49139124},"labels":[],"label_agreement":null},{"id":"W6955309452","doi":"10.58079/u7qf","title":"CFP: (Re)constructions: Researching and Rethinking Asia, April 2013","year":2012,"lang":"en","type":"article","venue":"OpenEdition (OpenEdition)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Government (linguistics); Agency (philosophy); Perspective (graphical); Work (physics); Field (mathematics)","score_opus":0.025925518291357558,"score_gpt":0.29605284123297426,"score_spread":0.2701273229416167,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6955309452","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0069862567,0.023008078,0.0069564586,0.78538346,0.02047976,0.00009096072,0.00044598736,0.00032492503,0.1563241],"genre_scores_gemma":[0.2834618,0.031335168,0.0140594,0.093788095,0.014348382,0.00039745524,0.0007846674,0.0016181753,0.56020683],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.996552,0.0015763695,0.00011044443,0.00041876928,0.00080936495,0.00053305394],"domain_scores_gemma":[0.9929652,0.003319441,0.00027764277,0.0008362222,0.0013576722,0.0012437189],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.008159864,0.00083052926,0.00034777226,0.0012830512,0.012008939,0.012086201,0.0017745831,0.006532834,0.020240368],"category_scores_gemma":[0.013996235,0.0005550464,0.00041533125,0.0020292404,0.020134093,0.016450545,0.007168546,0.010502676,0.0020498547],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045702527,0.00002373174,0.0006125909,0.00016049256,0.0000064039864,0.00027292958,0.03391197,0.00009575646,0.00040929814,0.14052902,0.7877953,0.036136795],"study_design_scores_gemma":[0.000007730386,0.00001019764,0.0011215511,0.0002533228,0.000004843595,0.00011723166,0.017817384,0.000057662986,0.00030027307,0.016229382,0.9640586,0.000021867934],"about_ca_topic_score_codex":0.11742719,"about_ca_topic_score_gemma":0.19225116,"teacher_disagreement_score":0.11742719,"about_ca_system_score_codex":0.016811179,"about_ca_system_score_gemma":0.019115595,"threshold_uncertainty_score":0.23348737},"labels":[],"label_agreement":null},{"id":"W6958238232","doi":"10.60692/nxy2d-c7806","title":"Host Resistance, Population Structure and the Long-Term Persistence of Bubonic Plague: Contributions of a Modelling Approach in the Malagasy Focus","year":2013,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Plague (disease); Metapopulation; Persistence (discontinuity); Host (biology); Population; Yersinia pestis; Zoonosis","score_opus":0.01788187525939764,"score_gpt":0.2196902717201734,"score_spread":0.20180839646077578,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6958238232","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96936834,0.0012964129,0.022645174,0.0015620255,0.000023612505,0.000029270497,0.00023629275,0.000054390213,0.004784598],"genre_scores_gemma":[0.9962734,0.0005659893,0.0020796747,0.000050928105,0.000029213523,0.000029721828,0.00005220444,0.000010574505,0.00090826495],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99979407,0.00013694866,0.000007499512,0.0000240507,0.000009912752,0.000027571687],"domain_scores_gemma":[0.99896073,0.0007275616,0.00018731208,0.000030691033,0.000039722945,0.00005391661],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005346177,0.0006003235,0.000414125,0.0007141832,0.0006184207,0.0013886992,0.00075889745,0.00085787615,0.001693734],"category_scores_gemma":[0.00250408,0.00023663639,0.00057187874,0.00054051547,0.0006920241,0.00084360316,0.0009063433,0.00048913946,0.00009054991],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007313781,0.0000984512,0.040578924,0.00009232427,0.00021806241,0.0004261122,0.00033011823,0.92833287,0.0016968601,0.022260064,0.0004849007,0.0054081073],"study_design_scores_gemma":[0.000012287842,0.000053026233,0.0079890415,0.000016584292,0.00006097958,0.000052680556,0.00012261792,0.9870544,0.00009041959,0.0038908217,0.0006431159,0.0000140622415],"about_ca_topic_score_codex":0.028679052,"about_ca_topic_score_gemma":0.014677447,"teacher_disagreement_score":0.028679052,"about_ca_system_score_codex":0.00093426264,"about_ca_system_score_gemma":0.0006014721,"threshold_uncertainty_score":0.05702424},"labels":[],"label_agreement":null},{"id":"W6986237784","doi":"","title":"Over my dead body: an exploration of burial practices for tallgrass prairie restoration","year":2022,"lang":"en","type":"dissertation","venue":"Mspace (University of Manitoba)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Endangered species; Natural (archaeology); Settlement (finance); Restoration ecology; Habitat; Land use; Natural resource; Critical habitat","score_opus":0.038924741564271975,"score_gpt":0.3160309087161054,"score_spread":0.27710616715183345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6986237784","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96778417,0.0048315907,0.0013888954,0.0060213236,0.0000526878,0.00024071962,0.000061113446,0.00001739442,0.019602112],"genre_scores_gemma":[0.96203095,0.014355394,0.009954962,0.0010508567,0.000028383007,0.00012380126,0.00007278679,0.000009319001,0.012373578],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9994822,0.00029134515,0.00000770931,0.0000341755,0.00009718523,0.000087324974],"domain_scores_gemma":[0.99948454,0.00020664105,0.000085812906,0.00001853701,0.00010467416,0.00009974609],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015171892,0.0002540028,0.00015592287,0.0004859614,0.0023765042,0.0021070421,0.0010868106,0.0006217637,0.0023079342],"category_scores_gemma":[0.0013192734,0.00012939778,0.00020688275,0.00095207425,0.00096510607,0.00081757206,0.0009330986,0.0006717255,0.00017211439],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003320216,0.005833703,0.09667994,0.0017448146,0.00009987882,0.0024296131,0.19604091,0.0019318183,0.006782927,0.016035793,0.013094115,0.6589945],"study_design_scores_gemma":[0.00007257602,0.0030044378,0.27773786,0.0015381702,0.00013140615,0.0005282042,0.56890875,0.002800535,0.0012917989,0.0037709333,0.14017008,0.00004529139],"about_ca_topic_score_codex":0.08548043,"about_ca_topic_score_gemma":0.41475463,"teacher_disagreement_score":0.08548043,"about_ca_system_score_codex":0.005116437,"about_ca_system_score_gemma":0.010111518,"threshold_uncertainty_score":0.16996574},"labels":[],"label_agreement":null},{"id":"W6990095320","doi":"","title":"Comparing urban and rural parasitism of coyote scat in Calgary, Alberta, Canada.","year":2010,"lang":"en","type":"article","venue":"CINECA IRIS Institutial research information system (University of Pisa)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Parasitism; Population; Rural area; Lacertidae","score_opus":0.01717459543473615,"score_gpt":0.25681211250811986,"score_spread":0.2396375170733837,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6990095320","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928889,0.000735765,0.000121638965,0.00012752993,0.000014541897,0.00003294675,0.0023159115,0.000011597782,0.0037510898],"genre_scores_gemma":[0.99421954,0.00043552797,0.0002353565,0.000049259503,0.0000038740645,0.000009255665,0.0011632533,0.0000058569976,0.0038779792],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997347,0.000031149357,0.000007547712,0.00004154141,0.00006625737,0.00011885202],"domain_scores_gemma":[0.9994324,0.00004585519,0.000081821214,0.000014625035,0.0002512637,0.000173956],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024699725,0.00029265098,0.00019989145,0.0014082151,0.0012896942,0.00063349964,0.0007009065,0.0003047385,0.0022800788],"category_scores_gemma":[0.0005994862,0.0002145702,0.00016243209,0.0025529987,0.00061604613,0.00014010635,0.00050362304,0.00036707215,0.00039079422],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042876706,0.000064183994,0.97306055,0.000091158014,0.000078165234,0.0005522223,0.0025310952,0.000447928,0.0028055895,0.00041296714,0.0032845128,0.016242927],"study_design_scores_gemma":[0.0000032316639,0.000010997118,0.9973808,0.000009499403,0.0000069516814,0.000033785916,0.0018196931,0.00009217791,0.000056331373,0.000009714951,0.0005743105,0.0000025946506],"about_ca_topic_score_codex":0.9897837,"about_ca_topic_score_gemma":0.99766123,"teacher_disagreement_score":0.012268022,"about_ca_system_score_codex":0.012268022,"about_ca_system_score_gemma":0.0070583085,"threshold_uncertainty_score":0.08901113},"labels":[],"label_agreement":null},{"id":"W6991641368","doi":"","title":"Host specificity, prevalence and intensity of infestation of fleas (Order Siphonaptera) of small mammals at selected sites in the city of Windhoek, Namibia","year":2014,"lang":"en","type":"article","venue":"UNAM Scholarly Repository (University of Namibia)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Xenopsylla; Flea; Host (biology); Infestation; Rodent; Mammal","score_opus":0.01464145825159902,"score_gpt":0.21974303860540706,"score_spread":0.20510158035380804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6991641368","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99969375,0.00003204007,0.000008632024,0.0000081869575,4.5130545e-7,0.0000021788944,0.00008566732,5.4677275e-7,0.00016860926],"genre_scores_gemma":[0.99934644,0.00006870221,0.000059300455,0.000010234349,0.0000012275076,0.000007317661,0.00015561594,5.319969e-7,0.0003507045],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99988663,0.000024429817,0.000014770255,0.0000256003,0.000018827917,0.000029730816],"domain_scores_gemma":[0.9997546,0.000028088089,0.0001241576,0.000011112419,0.000028342962,0.00005360841],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017131996,0.00015974643,0.00013806281,0.0005849606,0.0004323254,0.00027869976,0.00025434064,0.00016471531,0.0014013308],"category_scores_gemma":[0.00046110013,0.00020892952,0.00011230304,0.00044862105,0.00028820967,0.00028963515,0.00031619234,0.00011761375,0.00015625538],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057791094,0.000019013203,0.99194336,0.00002105718,0.00002077329,0.00025427403,0.0013618936,0.00003004256,0.003293486,0.000016109665,0.0000813042,0.0029008046],"study_design_scores_gemma":[7.52596e-7,0.000016276605,0.9990753,0.0000034548766,0.0000026452046,0.000106186904,0.00063203735,0.000022892284,0.000063214735,0.0000015039773,0.000074611715,0.0000012154688],"about_ca_topic_score_codex":0.062433776,"about_ca_topic_score_gemma":0.2467625,"teacher_disagreement_score":0.062433776,"about_ca_system_score_codex":0.00066808,"about_ca_system_score_gemma":0.00024414295,"threshold_uncertainty_score":0.12414074},"labels":[],"label_agreement":null},{"id":"W6995375838","doi":"","title":"Ontario s Green Energy Backlash: Politicians Exploit Growing Opposition To Wind Turbines, Solar","year":2011,"lang":"en","type":"other","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Exploit; Opposition (politics); Renewable energy; Solar energy; Climate change; Wind power","score_opus":0.017365538138463567,"score_gpt":0.2436618110967178,"score_spread":0.22629627295825425,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6995375838","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.014921071,0.0017873119,0.00035518067,0.14305346,0.0021589256,0.00014597765,0.0030228961,0.00028421404,0.8342709],"genre_scores_gemma":[0.02066433,0.0009164102,0.0002552876,0.008972157,0.00015022662,0.000021590515,0.00032689294,0.0000991101,0.968594],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99895275,0.00004447035,0.00001303386,0.00005242877,0.0005591208,0.00037819703],"domain_scores_gemma":[0.99782556,0.00023303,0.000094147785,0.00007275531,0.000707413,0.0010670982],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072249066,0.0003750848,0.00021105765,0.0007560563,0.009404653,0.0050556213,0.0007113137,0.0050103767,0.12436409],"category_scores_gemma":[0.0022993935,0.00034653035,0.00043118058,0.0014765566,0.0018446171,0.0010354765,0.0015306014,0.0025386154,0.0097203795],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005880833,0.00002576153,0.0021136291,0.000060850925,0.0000064476894,0.00034123452,0.00046104044,0.00010015022,0.0005314114,0.010776353,0.9675056,0.018018836],"study_design_scores_gemma":[0.000015673673,0.000007131225,0.004884831,0.000024136658,0.0000043860396,0.000035324538,0.00075260334,0.00009063959,0.00014304473,0.00045672889,0.9935777,0.000007786947],"about_ca_topic_score_codex":0.9361761,"about_ca_topic_score_gemma":0.98926723,"teacher_disagreement_score":0.12436409,"about_ca_system_score_codex":0.035065737,"about_ca_system_score_gemma":0.07293075,"threshold_uncertainty_score":0.41603935},"labels":[],"label_agreement":null},{"id":"W6996881856","doi":"","title":"Temporal evolution of the ecological niche of the white- footed mouse (Peromyscus leucopus) and its relation with the emergence of Lyme disease in Québec","year":2013,"lang":"en","type":"dissertation","venue":"eScholarship@McGill (McGill)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Directorate for Biological Sciences; Royal Society","keywords":"Lyme disease; Niche; Ecological niche; Disease; Relation (database)","score_opus":0.00963870749696812,"score_gpt":0.23112570800505325,"score_spread":0.22148700050808512,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6996881856","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99531186,0.00054749293,0.00009070249,0.00023627978,0.000004549411,0.000006710961,0.001137169,0.0000068101776,0.0026583418],"genre_scores_gemma":[0.9967991,0.00019798207,0.00007682117,0.000051237414,0.0000019994593,0.0000049286405,0.00033189924,0.0000040336104,0.0025318295],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99988306,0.000012485973,0.0000028755749,0.000025620335,0.000017193446,0.000058802732],"domain_scores_gemma":[0.9993931,0.000067337285,0.000112376976,0.000015274722,0.00022245763,0.00018954223],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030659715,0.00010968363,0.000113038994,0.00081212743,0.0007802708,0.0007114313,0.0004090659,0.00030767825,0.0042961007],"category_scores_gemma":[0.00057539897,0.00009593175,0.00013481859,0.00079921493,0.00044247863,0.00016474279,0.00027319268,0.000322482,0.00035267792],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037877462,0.00007102658,0.9587498,0.000035331526,0.0000793957,0.00018565208,0.0011068863,0.00087240053,0.01784974,0.00056019577,0.002339342,0.017771376],"study_design_scores_gemma":[0.0000011158013,0.0000072408366,0.9991466,0.000004579268,0.0000031977834,0.000010928542,0.00023110927,0.00015499482,0.00007133635,0.000007790741,0.00035805642,0.0000031032962],"about_ca_topic_score_codex":0.9470668,"about_ca_topic_score_gemma":0.97690797,"teacher_disagreement_score":0.052933216,"about_ca_system_score_codex":0.008928912,"about_ca_system_score_gemma":0.0030469033,"threshold_uncertainty_score":0.10648984},"labels":[],"label_agreement":null},{"id":"W6999379365","doi":"","title":"The core structure of the lipopolysaccharide from the causative agent of plague, Yersinia pestis.: Carbohyd.Res.","year":2002,"lang":"en","type":"article","venue":"NPARC","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Lipopolysaccharide; Core (optical fiber); Bacteria; Enterobacteriaceae; Escherichia coli","score_opus":0.019149439568883538,"score_gpt":0.25109064443662144,"score_spread":0.2319412048677379,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6999379365","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9499995,0.016680658,0.009932507,0.0013161226,0.0004745738,0.0001411817,0.0025557745,0.000109065135,0.0187906],"genre_scores_gemma":[0.9607432,0.0071601635,0.0059832796,0.0003784529,0.00011866274,0.000054086704,0.008242859,0.00003972847,0.01727956],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999651,0.0000055394016,0.0000025020981,0.0000061107944,0.000010437645,0.000010244728],"domain_scores_gemma":[0.9998704,0.000022573924,0.000028773586,0.000009302052,0.000035786365,0.00003321869],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012689037,0.00037230054,0.00012099251,0.0003625638,0.00025553262,0.00030845066,0.00019671179,0.00026722078,0.0031095815],"category_scores_gemma":[0.00030662346,0.000117905925,0.00015797325,0.00032823705,0.00021516411,0.00037405852,0.00021011096,0.00041199807,0.0011700523],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028305408,0.000032996522,0.0008873093,0.00026426848,0.00001886542,0.00037024482,0.000080155594,0.00025390205,0.9793803,0.0013214926,0.0011026857,0.016004715],"study_design_scores_gemma":[0.00008898794,0.0013904884,0.08138,0.0003526452,0.0001480119,0.00303966,0.00058662845,0.0039410223,0.8225175,0.0032283312,0.08328005,0.000046532943],"about_ca_topic_score_codex":0.0015613937,"about_ca_topic_score_gemma":0.000852377,"teacher_disagreement_score":0.0031095815,"about_ca_system_score_codex":0.000295127,"about_ca_system_score_gemma":0.0002482829,"threshold_uncertainty_score":0.01040256},"labels":[],"label_agreement":null},{"id":"W7003481073","doi":"","title":"17 Pinnated Grouse","year":2008,"lang":"en","type":"article","venue":"Insecta mundi","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Subspecies; Arid; Habitat; Population; Grassland; Coastal plain","score_opus":0.02536808779788189,"score_gpt":0.2691680512047161,"score_spread":0.2437999634068342,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7003481073","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45750716,0.0018136511,0.00092195714,0.00024207578,0.00029786737,0.0004089553,0.01393881,0.0004158048,0.5244537],"genre_scores_gemma":[0.46560192,0.0021212858,0.0023375931,0.0011081636,0.00011440855,0.00023346754,0.020434523,0.000081881306,0.5079668],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99986327,0.000009156547,0.000005894527,0.000043984513,0.000039713814,0.000038081293],"domain_scores_gemma":[0.9999323,0.000004927657,0.000015778822,0.0000056728777,0.000015217008,0.000026166734],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000053721218,0.00053311395,0.00014892679,0.0007710121,0.0005787274,0.00034230502,0.00031104998,0.0001626548,0.08497389],"category_scores_gemma":[0.00009303098,0.00011416374,0.00019108609,0.0004713507,0.00015366463,0.00019301652,0.0007219301,0.00018675567,0.02353136],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004070824,0.0005988037,0.29483318,0.0005092091,0.00011949207,0.0022057127,0.0012480307,0.00027393014,0.020614471,0.0027878298,0.10254786,0.57385445],"study_design_scores_gemma":[0.000027048205,0.0004129241,0.48718312,0.00014729777,0.00003659685,0.0027453608,0.0013259299,0.00016809716,0.0011754163,0.00021134435,0.5065411,0.000025753961],"about_ca_topic_score_codex":0.012581429,"about_ca_topic_score_gemma":0.041153055,"teacher_disagreement_score":0.08497389,"about_ca_system_score_codex":0.00020969547,"about_ca_system_score_gemma":0.00023103038,"threshold_uncertainty_score":0.284266},"labels":[],"label_agreement":null},{"id":"W7018525696","doi":"","title":"DIVERSITY AND ABUNDANCE OF FLEAS ON RICHARDSON’S GROUND SQUIRRELS AND IN THEIR BURROWS, AND THE BACTERIA WITHIN THE MICROBIOMES OF THESE FLEAS","year":2025,"lang":"en","type":"article","venue":"University Library (University of Saskatchewan)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Flea; Abundance (ecology); Host (biology); Yersinia pestis; Microbiome; Population; Biodiversity; Plague (disease); Parasitism","score_opus":0.0062659483821413346,"score_gpt":0.18548518279255413,"score_spread":0.1792192344104128,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7018525696","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979938,0.00041481887,0.00005987873,0.000037630834,0.000003675174,0.000007820372,0.00067184126,0.0000039740225,0.0008066133],"genre_scores_gemma":[0.9973725,0.00041885595,0.0003300244,0.00007626973,0.00000741328,0.0000076535935,0.0008930235,0.0000023107145,0.00089194207],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99983513,0.00002749533,0.000011585944,0.00005938142,0.000028952254,0.00003740727],"domain_scores_gemma":[0.99977607,0.000014536327,0.00010607954,0.000008407831,0.000036495632,0.000058487232],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019799928,0.00023126797,0.00014366808,0.00071783963,0.00035484,0.0003588851,0.00011698503,0.00020171358,0.0016645208],"category_scores_gemma":[0.00037494607,0.00014089867,0.00019988001,0.0003815459,0.00024025611,0.00027097913,0.00025119854,0.00017371683,0.00030277387],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016523812,0.000036147972,0.9737047,0.00009529109,0.000089714435,0.00025484932,0.001103004,0.00006351092,0.013746746,0.000057156692,0.0005293387,0.010154302],"study_design_scores_gemma":[0.0000017149289,0.000115280585,0.9978351,0.000017857927,0.0000159642,0.0002775464,0.00077997986,0.00004352015,0.00021317128,0.000012390332,0.00068364374,0.00000389249],"about_ca_topic_score_codex":0.020356962,"about_ca_topic_score_gemma":0.06813202,"teacher_disagreement_score":0.020356962,"about_ca_system_score_codex":0.0002841501,"about_ca_system_score_gemma":0.00016604243,"threshold_uncertainty_score":0.04047692},"labels":[],"label_agreement":null},{"id":"W7019131513","doi":"","title":"Fleas associated with the northern pocket gopher (&lt;i&gt;Thomomys talpoides&lt;/i&gt;) in Elbert County, Colorado","year":2005,"lang":"en","type":"article","venue":"ScholarsArchive  (Brigham Young University)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Flea; Abundance (ecology); Relative species abundance; Host (biology); Rodent; Xenopsylla","score_opus":0.006530325792197534,"score_gpt":0.2092531588381838,"score_spread":0.20272283304598626,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7019131513","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988205,0.00006823241,0.00004001689,0.00001756779,9.205539e-7,0.000010496711,0.00028994805,0.000003118301,0.00074912095],"genre_scores_gemma":[0.9981931,0.00013689701,0.00017511046,0.000034255827,0.0000026779728,0.000014083348,0.00062124396,0.0000017911013,0.0008207783],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99983346,0.000018760386,0.000006526133,0.00005139907,0.000034523862,0.000055169927],"domain_scores_gemma":[0.9997439,0.00002255781,0.00008444022,0.000013937573,0.000052693893,0.00008247543],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001338511,0.00015574026,0.00014521394,0.000649389,0.0009600455,0.00026113057,0.00021008331,0.00019283993,0.001048812],"category_scores_gemma":[0.00018695182,0.00013667057,0.00008238144,0.00046302975,0.00035131216,0.00021159646,0.00036851448,0.0001704037,0.0001586155],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005560403,0.000044416673,0.99036574,0.000024482846,0.000024136929,0.00034987516,0.001054204,0.00011339652,0.0038086982,0.000023513016,0.00050434924,0.0036315208],"study_design_scores_gemma":[0.000001379105,0.000021477807,0.9985915,0.000006271159,0.0000053322206,0.00011283441,0.0006772803,0.000054685057,0.00010042728,0.0000036601639,0.00042385666,0.0000013118549],"about_ca_topic_score_codex":0.34161457,"about_ca_topic_score_gemma":0.78287536,"teacher_disagreement_score":0.34161457,"about_ca_system_score_codex":0.0015798949,"about_ca_system_score_gemma":0.000770632,"threshold_uncertainty_score":0.6792523},"labels":[],"label_agreement":null},{"id":"W7026948956","doi":"","title":"Bust of RC Mills by may Barrie Facing Chancelry Building","year":2021,"lang":"en","type":"other","venue":"ANU Open Research (Australian National University)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Bust; Boom; Government (linguistics); Industrial Revolution","score_opus":0.09556581317366797,"score_gpt":0.3977210805680481,"score_spread":0.30215526739438014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7026948956","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0009109871,0.0020383853,0.00062876154,0.01603465,0.015237021,0.00018062537,0.0012564495,0.0010479164,0.96266514],"genre_scores_gemma":[0.0005479573,0.00017221092,0.00008607011,0.0007697776,0.00023853136,0.000013010727,0.00011361873,0.000093382434,0.99796546],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99848276,0.00016477366,0.000036925787,0.0003187575,0.00066442555,0.0003324161],"domain_scores_gemma":[0.99641955,0.00021312523,0.00007446833,0.00021002263,0.0008147951,0.0022680466],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010392917,0.0012790754,0.00076699007,0.0015568503,0.0033452113,0.0040371246,0.0014390567,0.0034458207,0.8508599],"category_scores_gemma":[0.003227073,0.000672143,0.0010180916,0.0006168357,0.0006718081,0.0014581174,0.0038142784,0.003660243,0.65788215],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043692227,0.00004918393,0.0001383521,0.000035919275,0.0000029421726,0.00009236783,0.000022488684,0.000030229963,0.0001406982,0.0012177309,0.9691069,0.029119378],"study_design_scores_gemma":[0.0000066590587,0.000019346346,0.00033779713,0.00002640741,0.0000017233116,0.0000565344,0.000045198543,0.00002452687,0.000054695614,0.00017985591,0.9992435,0.0000037023922],"about_ca_topic_score_codex":0.008911914,"about_ca_topic_score_gemma":0.035408117,"teacher_disagreement_score":0.8508599,"about_ca_system_score_codex":0.0012888003,"about_ca_system_score_gemma":0.004056836,"threshold_uncertainty_score":0.21273023},"labels":[],"label_agreement":null},{"id":"W7033077520","doi":"","title":"Pesticides: Health impacts and alternatives. Proceedings of a workshop held in Colombo, 24 January 2002","year":2017,"lang":"en","type":"article","venue":"AgEcon Search (University of Minnesota, USA)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Consortium of International Agricultural Research Centers; International Development Research Centre","keywords":"Government (linguistics); Public health; Agrochemical; Developing country; Rural area; Occupational safety and health; Incidence (geometry); Poison control","score_opus":0.030846218564947736,"score_gpt":0.30662999360028514,"score_spread":0.2757837750353374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7033077520","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.038837146,0.57466835,0.0014806337,0.19021852,0.03644487,0.0008605834,0.0016884392,0.00011030426,0.15569116],"genre_scores_gemma":[0.13888884,0.27033964,0.0030666324,0.016055109,0.01518066,0.00071860803,0.0013489369,0.00009119076,0.5543103],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997008,0.00007738353,0.000016897675,0.000043349315,0.0000920739,0.000069518326],"domain_scores_gemma":[0.9996445,0.00009479799,0.000022569167,0.000008922665,0.00009012192,0.0001391707],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013627704,0.0012416443,0.00041063887,0.0005522215,0.0017149647,0.0013800313,0.0008566627,0.0020998998,0.031582374],"category_scores_gemma":[0.0007987075,0.00028078782,0.000274075,0.00039766319,0.0007369849,0.0010459194,0.0018465953,0.0016847429,0.0024143036],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007621566,0.00038081003,0.00233681,0.0027146598,0.000041214138,0.001791855,0.0043202285,0.00053214876,0.010692541,0.0027237087,0.57390684,0.39979702],"study_design_scores_gemma":[0.000037415077,0.00017866697,0.005426865,0.0007244585,0.0000232191,0.00030870383,0.0023298543,0.00006212924,0.0011993749,0.00086865405,0.9888256,0.000015131307],"about_ca_topic_score_codex":0.010926825,"about_ca_topic_score_gemma":0.04574193,"teacher_disagreement_score":0.031582374,"about_ca_system_score_codex":0.0018834403,"about_ca_system_score_gemma":0.0023661894,"threshold_uncertainty_score":0.105653584},"labels":[],"label_agreement":null},{"id":"W7033140142","doi":"","title":"A play-based intervention for preschool children with Developmental Coordination Disorder","year":2012,"lang":"en","type":"other","venue":"USC Research Bank (University of the Sunshine Coast)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Intervention (counseling); Coaching; Scale (ratio); Typically developing; Set (abstract data type)","score_opus":0.01882443791278744,"score_gpt":0.27922461102605733,"score_spread":0.2604001731132699,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7033140142","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98739314,0.0012344919,0.0012983263,0.00045627056,0.00005294547,0.00088891224,0.00046813575,0.00023754801,0.007970221],"genre_scores_gemma":[0.9641747,0.0027326953,0.018614557,0.0002676797,0.000047632107,0.0026240693,0.0010658579,0.000016129115,0.010456633],"study_design_codex":"design_other","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.99982256,0.0000414466,0.00001459813,0.000034623823,0.000035120167,0.000051688232],"domain_scores_gemma":[0.99982905,0.000028744967,0.000024921339,0.000008942928,0.000013278559,0.000095032934],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000254137,0.0006174233,0.00036744116,0.00060943735,0.0005333023,0.00019287285,0.0006758107,0.00031274132,0.006295893],"category_scores_gemma":[0.00044549306,0.00011185055,0.0002653588,0.00030196755,0.0001740685,0.00015331557,0.0008567746,0.00043861635,0.00030099088],"study_design_candidate":"nonrandomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013348788,0.06440384,0.04212189,0.0031894452,0.00021197075,0.0027338667,0.0027844156,0.00096928753,0.021474749,0.0006654824,0.011043788,0.8370525],"study_design_scores_gemma":[0.0153120635,0.040915955,0.87101865,0.0016884643,0.00064767903,0.0037438183,0.004036167,0.0028552366,0.015062701,0.00078973843,0.043864567,0.00006495765],"about_ca_topic_score_codex":0.009574346,"about_ca_topic_score_gemma":0.027299367,"teacher_disagreement_score":0.009574346,"about_ca_system_score_codex":0.0006029038,"about_ca_system_score_gemma":0.001312717,"threshold_uncertainty_score":0.021061838},"labels":[],"label_agreement":null},{"id":"W7037456133","doi":"","title":"Europäische Sicherheit: Reaktionen im Westen auf Russlands Initiative: Beiträge aus Fachzeitschriften und Think-Tank-Publikationen","year":2013,"lang":"de","type":"other","venue":"Social Science Open Access Repository (GESIS – Leibniz Institute for the Social Sciences)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Nucleofection; Gestational period; TSG101; Diafiltration; Fusible alloy; Hyporeflexia; Liquation; Dysgeusia","score_opus":0.08506266475820659,"score_gpt":0.4318019425952733,"score_spread":0.3467392778370667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7037456133","genre_codex":"other","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.042157613,0.30369005,0.009228732,0.29404658,0.027992442,0.00083522475,0.006787913,0.0014273083,0.3138341],"genre_scores_gemma":[0.23041537,0.30751958,0.017867774,0.029176863,0.006572798,0.00084672467,0.007200479,0.0017012425,0.39869916],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9954348,0.0017223696,0.00035769457,0.0003063343,0.0015717135,0.00060704304],"domain_scores_gemma":[0.99058175,0.004209024,0.0007203031,0.0006270091,0.0021376035,0.0017242972],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.013990616,0.00068484846,0.0005383388,0.0036416315,0.0026524677,0.00892638,0.0007751169,0.002182674,0.036969606],"category_scores_gemma":[0.010889043,0.0002710471,0.0005473042,0.0055825217,0.0017999619,0.0046712686,0.004430651,0.0022926247,0.0049416185],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001671659,0.00014207156,0.002534288,0.003090065,0.000053783915,0.0005612891,0.013473732,0.00028745274,0.0016438655,0.033892103,0.5531516,0.3910026],"study_design_scores_gemma":[0.000013464527,0.000024431478,0.004655214,0.0017596561,0.000019628249,0.00007872465,0.008317709,0.00009058957,0.00079797517,0.003382323,0.98084,0.00002014518],"about_ca_topic_score_codex":0.023047863,"about_ca_topic_score_gemma":0.028949186,"teacher_disagreement_score":0.036969606,"about_ca_system_score_codex":0.007240129,"about_ca_system_score_gemma":0.015146924,"threshold_uncertainty_score":0.123675644},"labels":[],"label_agreement":null},{"id":"W7039034025","doi":"","title":"2018 04 03 Le joueur de Football Gloire Muganda","year":2018,"lang":"fr","type":"other","venue":"Bulletin of Miscellaneous Information (Royal Gardens Kew)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Football; Order (exchange); New horizons","score_opus":0.0057879725943651835,"score_gpt":0.20540948820704666,"score_spread":0.1996215156126815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7039034025","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0016538511,0.0012856373,0.0002971809,0.004875054,0.005751856,0.00009248096,0.0023977454,0.00092116185,0.9827251],"genre_scores_gemma":[0.001628285,0.0002960415,0.00011264331,0.00024824,0.00027515844,0.000011947847,0.00043659852,0.00015350728,0.9968375],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995565,0.000037670314,0.000013140353,0.00007674447,0.00020077398,0.00011517292],"domain_scores_gemma":[0.9988741,0.000068336165,0.000041942872,0.00006892128,0.00044725544,0.00049945083],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00062209176,0.0006195932,0.0003855123,0.00094328116,0.0015914836,0.003393347,0.00062056485,0.0015611174,0.78443944],"category_scores_gemma":[0.0013335757,0.00019428298,0.00032898234,0.00047568724,0.0004954625,0.0007603789,0.0015417851,0.0014190726,0.5971317],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058055168,0.000036584286,0.0006198566,0.000062897176,0.0000026536948,0.00016047624,0.000054884546,0.000027373464,0.0006060357,0.0015846497,0.9426449,0.054141812],"study_design_scores_gemma":[0.0000029204753,0.00000991016,0.0008421692,0.00003165821,4.5024274e-7,0.00003785232,0.000042505006,0.000015527494,0.00008158483,0.000053638232,0.99887985,0.000001966439],"about_ca_topic_score_codex":0.018529003,"about_ca_topic_score_gemma":0.044738945,"teacher_disagreement_score":0.21556056,"about_ca_system_score_codex":0.0017254074,"about_ca_system_score_gemma":0.001724827,"threshold_uncertainty_score":0.30747092},"labels":[],"label_agreement":null},{"id":"W7039346613","doi":"","title":"Markberedning i brant och stenig terräng : en jämförande studie mellan markberedning med harv, grävmaskin och spadförsedd skördare","year":2016,"lang":"sv","type":"other","venue":"Epsilon Archive for Student Projects (University of Southampton)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Nova scotia","score_opus":0.01406545031843813,"score_gpt":0.27577464265391377,"score_spread":0.2617091923354756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7039346613","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.78158695,0.016537532,0.003901066,0.0065566525,0.00051352516,0.00047358478,0.0017571397,0.00014394827,0.18852952],"genre_scores_gemma":[0.82721347,0.010016788,0.005247393,0.003235038,0.00011294056,0.00046324707,0.0014761123,0.00017386732,0.1520611],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9978009,0.00059928023,0.00012429986,0.0004258184,0.00084065285,0.00020906633],"domain_scores_gemma":[0.9967584,0.0015717357,0.00046621583,0.00029582102,0.0005162626,0.0003915064],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0039966414,0.0003185433,0.0004876133,0.0005307566,0.0017990472,0.0055123055,0.0011284718,0.0010256398,0.030298611],"category_scores_gemma":[0.0050791646,0.00034141983,0.00067385874,0.0009011535,0.001319389,0.0039840536,0.0021076528,0.0017936304,0.004136566],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020149532,0.0028984852,0.10294855,0.007957622,0.0005085287,0.00091672107,0.12798381,0.0012083588,0.009065427,0.047556654,0.067618184,0.62932277],"study_design_scores_gemma":[0.00013424167,0.0023240768,0.19244917,0.004179283,0.00056221185,0.0003610067,0.10479482,0.00041222127,0.009924983,0.0112680625,0.6734349,0.00015503415],"about_ca_topic_score_codex":0.013248093,"about_ca_topic_score_gemma":0.044861294,"teacher_disagreement_score":0.030298611,"about_ca_system_score_codex":0.003008206,"about_ca_system_score_gemma":0.0035492377,"threshold_uncertainty_score":0.10135901},"labels":[],"label_agreement":null},{"id":"W7043591772","doi":"","title":"Structural identification of the lipopolysaccharide O-antigen produced by Yersinia enterocolitica serotype 0:28","year":2000,"lang":"en","type":"article","venue":"NPARC","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Yersinia enterocolitica; Serotype; Lipopolysaccharide; Identification (biology); Bacteria; Enterobacteriaceae","score_opus":0.007568426210468328,"score_gpt":0.255250223449126,"score_spread":0.24768179723865769,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7043591772","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99201465,0.00022192887,0.0005708067,0.00029474046,0.00010042729,0.000041907864,0.0004375865,0.000026947275,0.006290996],"genre_scores_gemma":[0.9687334,0.00040872136,0.002368204,0.00016083612,0.000060794762,0.000028268012,0.0043581063,0.000046595185,0.023835171],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998919,0.000015029065,0.000006292345,0.000020374566,0.00003574535,0.00003068117],"domain_scores_gemma":[0.9995316,0.000052578256,0.000078949255,0.000042070747,0.00018894239,0.00010579752],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018314834,0.0003160136,0.00015969692,0.00034559896,0.0002654567,0.000305667,0.00025431032,0.00035261974,0.007475247],"category_scores_gemma":[0.0005209769,0.00014287802,0.00022307369,0.0002340653,0.00027119054,0.00025079935,0.00031468508,0.000435418,0.0032712657],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029222484,0.0000549845,0.002399303,0.000053540585,0.0000072117573,0.00043051463,0.00008213303,0.000029223136,0.99265724,0.00022524776,0.00052390655,0.003244499],"study_design_scores_gemma":[0.00008738844,0.0015165226,0.120516665,0.00003202537,0.000036723533,0.0019103099,0.0007528317,0.00065841764,0.8483335,0.00026186235,0.02587326,0.000020634405],"about_ca_topic_score_codex":0.0010482395,"about_ca_topic_score_gemma":0.00067087176,"teacher_disagreement_score":0.007475247,"about_ca_system_score_codex":0.00025873806,"about_ca_system_score_gemma":0.0004236026,"threshold_uncertainty_score":0.025007248},"labels":[],"label_agreement":null},{"id":"W7084285239","doi":"","title":"Changes in Pain Catastrophizing and Related Outcomes Following a Single-Session Empowered Relief Intervention Delivered by Physical Therapists in Workers with Low Back Pain: A Pilot Study","year":2025,"lang":"en","type":"article","venue":"Dove Medical Press (Taylor and Francis Group)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pain catastrophizing; Intervention (counseling); Low back pain; Anxiety; Randomized controlled trial; Musculoskeletal pain; Cognitive behavioral therapy","score_opus":0.01031623606939294,"score_gpt":0.2748347596180499,"score_spread":0.26451852354865696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7084285239","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985164,0.000112952206,0.00010528856,0.00007405905,0.000025069809,0.0007888419,0.00004933157,0.000007565862,0.00032038568],"genre_scores_gemma":[0.99180144,0.00042346382,0.0015676211,0.00019578256,0.000067116634,0.0044735163,0.000120162906,0.000004335444,0.0013465695],"study_design_codex":"nonrandomized_trial","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.9990651,0.00034729345,0.000051823194,0.00011346245,0.00017771963,0.0002446135],"domain_scores_gemma":[0.9988305,0.0003567381,0.00014936816,0.00007377777,0.00015131447,0.0004383152],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017956612,0.00048449126,0.00097078126,0.00031527155,0.00082449394,0.00049813546,0.0006337647,0.00071718486,0.0034919246],"category_scores_gemma":[0.0021303368,0.00037262117,0.0009880447,0.0002304465,0.00050721917,0.00045964646,0.00068896974,0.0013808222,0.0004771213],"study_design_candidate":"nonrandomized_trial","study_design_consensus":"nonrandomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.041492097,0.6039186,0.03323775,0.0022132944,0.0006307907,0.00049916614,0.009750134,0.00066537084,0.014439588,0.00012091745,0.0022417773,0.2907904],"study_design_scores_gemma":[0.03831544,0.6170704,0.33086586,0.0004099857,0.00053926563,0.00012740979,0.006201114,0.000998472,0.002204092,0.00016641381,0.0029890093,0.00011259692],"about_ca_topic_score_codex":0.0036266446,"about_ca_topic_score_gemma":0.009123244,"teacher_disagreement_score":0.0036266446,"about_ca_system_score_codex":0.0008674159,"about_ca_system_score_gemma":0.0021364917,"threshold_uncertainty_score":0.011681676},"labels":[],"label_agreement":null},{"id":"W7093997896","doi":"","title":"Prairie Dogs","year":2023,"lang":"","type":"article","venue":"Lincoln (University of Nebraska)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Animal and Plant Health Inspection Service; U.S. Department of Agriculture","keywords":"Endangered species; Wildlife; Prairie dog; Threatened species; Habitat; Wildlife management; Wildlife conservation; Grassland; Habitat destruction","score_opus":0.016659219026315633,"score_gpt":0.25561290769710615,"score_spread":0.23895368867079053,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7093997896","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.26724482,0.012829174,0.007616896,0.0034372795,0.0012302219,0.0013919729,0.027896173,0.0011864305,0.677167],"genre_scores_gemma":[0.46793297,0.011942876,0.014648747,0.0046055503,0.00041797664,0.00062131754,0.03213513,0.0001964214,0.4674991],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9995271,0.00006330204,0.000030038154,0.00010845913,0.00018090499,0.0000902269],"domain_scores_gemma":[0.9996437,0.00003770153,0.00006783318,0.000044460514,0.00012459357,0.00008170968],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045571473,0.00046552226,0.00039697668,0.00058955624,0.0011108012,0.00089684874,0.00084402895,0.0005122752,0.117174335],"category_scores_gemma":[0.0011276552,0.00022485093,0.0002605819,0.0007098744,0.00025746555,0.0010307747,0.00096938293,0.00052957813,0.04014044],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031836636,0.00080304896,0.07413172,0.0011061422,0.000069925474,0.001652495,0.0014871504,0.00030412764,0.0034987556,0.0050709695,0.4004982,0.51105917],"study_design_scores_gemma":[0.000055185516,0.00031733487,0.08466571,0.00027259227,0.00003435499,0.0038271435,0.001522421,0.00022003314,0.00044625663,0.0011709181,0.9074448,0.000023297547],"about_ca_topic_score_codex":0.005786835,"about_ca_topic_score_gemma":0.015857702,"teacher_disagreement_score":0.117174335,"about_ca_system_score_codex":0.0004271957,"about_ca_system_score_gemma":0.0005113717,"threshold_uncertainty_score":0.3919872},"labels":[],"label_agreement":null},{"id":"W7096573836","doi":"","title":"NOUVEAUX AGENTS ANTIBACTÉRIENS","year":2015,"lang":"en","type":"article","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"MEDLINE; Action (physics); Subject (documents)","score_opus":0.039933506854021375,"score_gpt":0.3238507814106675,"score_spread":0.2839172745566461,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7096573836","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.030208627,0.7463699,0.0067321006,0.022827085,0.010305646,0.00033078116,0.0010739604,0.00073258206,0.18141925],"genre_scores_gemma":[0.19607723,0.3788129,0.015162755,0.015400135,0.0068697203,0.0005384749,0.0022792201,0.00015491742,0.38470468],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99907625,0.00022751566,0.00006289447,0.00015290797,0.00035036152,0.00012998783],"domain_scores_gemma":[0.9990409,0.00019701145,0.00013288384,0.000085343505,0.00033744148,0.00020640144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008256929,0.00081435265,0.0007111534,0.000942528,0.0007721606,0.0011730298,0.000892258,0.0016126957,0.041919064],"category_scores_gemma":[0.0014294882,0.00020973106,0.00080020865,0.0005532958,0.0005137875,0.0004925231,0.0007837322,0.002059408,0.015000249],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014094249,0.0009882859,0.003367166,0.0022671844,0.00013395787,0.0013268618,0.00020284893,0.00017635924,0.04287284,0.00881028,0.05978146,0.8786632],"study_design_scores_gemma":[0.00016953147,0.0010495521,0.0036552788,0.0004468641,0.00005523305,0.002071947,0.000078765814,0.00007922038,0.012698376,0.000996753,0.978678,0.000020547095],"about_ca_topic_score_codex":0.0021379692,"about_ca_topic_score_gemma":0.0043759895,"teacher_disagreement_score":0.041919064,"about_ca_system_score_codex":0.00090420595,"about_ca_system_score_gemma":0.001097355,"threshold_uncertainty_score":0.14023322},"labels":[],"label_agreement":null},{"id":"W7096740631","doi":"","title":"JEAN-FRANÇOIS GAUTHIER ROLE DES PEPTIDES N-FORMYLES ET DES CHIMIOKINES DANS LE RECRUTEMENT NEUTROPHILIQUE LORS D&amp;apos;UNE","year":2015,"lang":"en","type":"article","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Context (archaeology); Scope (computer science); Work (physics); Identification (biology)","score_opus":0.11311222505699298,"score_gpt":0.3646876369304985,"score_spread":0.2515754118735055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7096740631","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5272689,0.2300624,0.03929861,0.08864168,0.022861397,0.000653759,0.0015462945,0.0016138594,0.088053055],"genre_scores_gemma":[0.6401684,0.054097105,0.008427302,0.0036265429,0.00710995,0.00027608746,0.00055144605,0.00042548368,0.2853176],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992446,0.00025763593,0.000027393216,0.00023171281,0.00016116323,0.00007756812],"domain_scores_gemma":[0.99874395,0.0004501214,0.000092148555,0.000030257414,0.0003888849,0.00029468111],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017018733,0.0009668049,0.0005784621,0.0007620415,0.000777599,0.0014743058,0.00047699735,0.0013375692,0.011032977],"category_scores_gemma":[0.0015373228,0.0004240923,0.00049965887,0.0002195982,0.00078473135,0.0009808354,0.00063133216,0.0016455397,0.0037786448],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.014496805,0.00085990265,0.017481973,0.0014494489,0.0003035492,0.007420983,0.002326679,0.006128869,0.47298488,0.023305714,0.104580246,0.34866098],"study_design_scores_gemma":[0.00052496535,0.0020378912,0.036162745,0.0002611252,0.00009930392,0.0060055386,0.00089804304,0.0044590808,0.24224295,0.0021009822,0.70496994,0.00023743544],"about_ca_topic_score_codex":0.0111938855,"about_ca_topic_score_gemma":0.003518764,"teacher_disagreement_score":0.0111938855,"about_ca_system_score_codex":0.0010186,"about_ca_system_score_gemma":0.0011680145,"threshold_uncertainty_score":0.036908984},"labels":[],"label_agreement":null},{"id":"W7098115872","doi":"","title":"HISTORICAL REVIEW 2,500-year Evolution of the Term Epidemic","year":2013,"lang":"en","type":"article","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Plague (disease); Meaning (existential); Terminology; Pandemic; Term (time); Quarter (Canadian coin); Epidemic disease; Infectious disease (medical specialty)","score_opus":0.012664143869737906,"score_gpt":0.2687925289717305,"score_spread":0.2561283851019926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7098115872","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00025178227,0.97894603,0.0002193637,0.0054323105,0.005833969,0.000011502059,0.00019809301,0.000017481636,0.0090895165],"genre_scores_gemma":[0.0035372763,0.9788905,0.00031995724,0.00573719,0.0072686425,0.000026199397,0.0003208531,0.000028528139,0.0038708847],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985654,0.00038384963,0.00026372145,0.00027879197,0.0003945494,0.000113825234],"domain_scores_gemma":[0.9960782,0.0021150785,0.00044078683,0.000106704494,0.0010342135,0.00022502776],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020260592,0.0008961906,0.0011728883,0.005917702,0.001201287,0.0035394093,0.0012944137,0.0023443634,0.012783621],"category_scores_gemma":[0.008081233,0.00035919278,0.0007715145,0.008932407,0.00222379,0.004928169,0.0015011587,0.003935671,0.0062838932],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011534087,0.000044484408,0.0012773233,0.021880152,0.00008014428,0.0010841825,0.002087073,0.0002814476,0.0003465743,0.04652018,0.41900462,0.50727856],"study_design_scores_gemma":[0.0000019259285,0.000010710778,0.0005467693,0.005795667,0.000021438425,0.00093432603,0.0001631602,0.000014149045,0.000028211041,0.0012135113,0.9912595,0.000010620465],"about_ca_topic_score_codex":0.0045843795,"about_ca_topic_score_gemma":0.0043008234,"teacher_disagreement_score":0.012783621,"about_ca_system_score_codex":0.0029179023,"about_ca_system_score_gemma":0.004670016,"threshold_uncertainty_score":0.04276544},"labels":[],"label_agreement":null},{"id":"W7099857360","doi":"","title":"A RICKETTSIAL INFECTION IN CANADIAN VOLES BY JAMES A. BAKER, PH.D., Captain, Veterinary Corps, Army of the United States","year":2013,"lang":"en","type":"article","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Quarantine; Mile; Wildlife; Mainland; Government (linguistics); Agency (philosophy)","score_opus":0.010827213658144695,"score_gpt":0.2559380550373639,"score_spread":0.24511084137921918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7099857360","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96008056,0.007971876,0.00015357469,0.0074938117,0.00064787664,0.00014225271,0.0020070656,0.000044680342,0.021458333],"genre_scores_gemma":[0.97130954,0.0064373934,0.00022982924,0.0014156824,0.00011980294,0.000023258439,0.0010004591,0.00000943564,0.019454556],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998066,0.000013976184,0.000005506665,0.000027432314,0.00008151634,0.00006506397],"domain_scores_gemma":[0.9996655,0.000015424132,0.000019309828,0.0000033988924,0.00017178702,0.00012458274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022407812,0.00049883727,0.0001745024,0.0008308906,0.002456525,0.0005108867,0.00042163397,0.00039860164,0.0028897391],"category_scores_gemma":[0.00062459824,0.00025807382,0.00019019721,0.0007503215,0.000684731,0.00022176161,0.00024944622,0.000548771,0.0003117634],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039463214,0.00042236177,0.8554737,0.0001905523,0.00012138038,0.0034383354,0.0032965657,0.0005000375,0.0031630602,0.00040054574,0.07819565,0.054403305],"study_design_scores_gemma":[0.000012507495,0.000109405555,0.9811973,0.000066284774,0.00002465693,0.0010650128,0.0020402889,0.00020336034,0.00013726862,0.000028457736,0.015096893,0.000018532714],"about_ca_topic_score_codex":0.98127395,"about_ca_topic_score_gemma":0.98879343,"teacher_disagreement_score":0.01872605,"about_ca_system_score_codex":0.008321246,"about_ca_system_score_gemma":0.0058095455,"threshold_uncertainty_score":0.060375094},"labels":[],"label_agreement":null},{"id":"W7100259388","doi":"","title":"DEPARTEMENT DE MICROLOGIE-INFECTIOGIE ET IMMUNOLOGIE","year":2014,"lang":"en","type":"article","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Mutation; MEDLINE; Disease","score_opus":0.01145434036348543,"score_gpt":0.31342640085952006,"score_spread":0.30197206049603464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7100259388","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11200149,0.2545024,0.044401314,0.1727474,0.044031043,0.0015906598,0.01626642,0.0065542315,0.34790507],"genre_scores_gemma":[0.23723617,0.088016845,0.03260179,0.00826658,0.013835629,0.0006973966,0.005244735,0.0010501192,0.61305076],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972972,0.00045030797,0.00016121866,0.00062971964,0.00086968415,0.0005918329],"domain_scores_gemma":[0.9916984,0.0013654798,0.00046355257,0.0004137135,0.0018570338,0.0042019403],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.003163894,0.0016473164,0.0015362537,0.003858011,0.0021350433,0.0045082686,0.0023107906,0.0036561047,0.10594047],"category_scores_gemma":[0.00544017,0.00072293455,0.0010655782,0.0011845366,0.0019816586,0.0013790217,0.0029797943,0.0047952603,0.053405985],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004028714,0.0013936699,0.043025106,0.0028029939,0.00024904252,0.0032645753,0.0023645638,0.0021354791,0.038717557,0.040124275,0.2901707,0.5717233],"study_design_scores_gemma":[0.00028670614,0.00072577863,0.058146216,0.000560738,0.0000825158,0.007318666,0.00084836176,0.0017367938,0.028992258,0.0077548064,0.8934126,0.00013447774],"about_ca_topic_score_codex":0.012737823,"about_ca_topic_score_gemma":0.009733778,"teacher_disagreement_score":0.89405954,"about_ca_system_score_codex":0.0075566936,"about_ca_system_score_gemma":0.008160519,"threshold_uncertainty_score":0.35440618},"labels":[],"label_agreement":null},{"id":"W7101026532","doi":"","title":"HISTORICAL REVIEW Biological Warfare at the 1346 Siege of Caffa","year":2013,"lang":"en","type":"article","venue":"","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Biological warfare; Plague (disease); Siege; Terrorism; Yersinia pestis; Quarter (Canadian coin); First world war","score_opus":0.028860313935016018,"score_gpt":0.28680060219613074,"score_spread":0.2579402882611147,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7101026532","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002635755,0.98432577,0.00006782898,0.0026819934,0.0020351848,0.00000454917,0.00003688631,0.0000050555136,0.010579102],"genre_scores_gemma":[0.0037666706,0.98904294,0.00008162206,0.0017171225,0.0027484405,0.000011389844,0.00005070814,0.000005311631,0.0025757574],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999521,0.00015337001,0.000059051585,0.00010245732,0.00011066736,0.00005342605],"domain_scores_gemma":[0.99872786,0.00068884285,0.00015692694,0.000038605718,0.00030057807,0.00008712486],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010948374,0.0007314905,0.00075351074,0.0038828163,0.0015005121,0.0031386258,0.000829373,0.0020808952,0.009468037],"category_scores_gemma":[0.0024997126,0.00036071675,0.0002866157,0.00556072,0.0024800296,0.0028058938,0.00092362496,0.002729279,0.004032223],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015427698,0.00007396786,0.0010707118,0.022880701,0.00007093903,0.0016938843,0.0042845868,0.0002974121,0.00052188465,0.07040287,0.3847276,0.5138211],"study_design_scores_gemma":[0.000001630994,0.000016728796,0.00068185525,0.004881091,0.000010073983,0.0008551659,0.00029373015,0.000006206986,0.000042100128,0.0006543641,0.99255085,0.0000061535343],"about_ca_topic_score_codex":0.006132391,"about_ca_topic_score_gemma":0.0072692744,"teacher_disagreement_score":0.009468037,"about_ca_system_score_codex":0.002955235,"about_ca_system_score_gemma":0.0024866501,"threshold_uncertainty_score":0.03167379},"labels":[],"label_agreement":null},{"id":"W7110416608","doi":"10.3354/dao03904","title":"Wild-type cutoff values for standard broth microdilution antimicrobial susceptibility testing of Yersinia ruckeri isolates","year":2025,"lang":"en","type":"article","venue":"Diseases of Aquatic Organisms","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Prince Edward Island","funders":"","keywords":"Broth microdilution; Antimicrobial; Yersinia ruckeri; Minimum inhibitory concentration; Antibiotic resistance; Cutoff","score_opus":0.011172480335145021,"score_gpt":0.2893673086323631,"score_spread":0.2781948282972181,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7110416608","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45453957,0.0027138053,0.049921576,0.001355961,0.00086800073,0.0019532728,0.4569546,0.0053365906,0.026356695],"genre_scores_gemma":[0.39259094,0.001237476,0.10107197,0.0009739245,0.00016451192,0.006189844,0.4908823,0.001495125,0.005393863],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9823161,0.0032359622,0.0040837424,0.003308423,0.0057581128,0.0012976164],"domain_scores_gemma":[0.97675407,0.006466887,0.0059676175,0.0042442516,0.0059533496,0.00061390235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.012321329,0.0011661302,0.0015870912,0.0056582526,0.0007731679,0.0026295672,0.0019819962,0.001118305,0.0071250843],"category_scores_gemma":[0.03184471,0.0005016049,0.001328653,0.0052143764,0.00078670244,0.0010562501,0.0014590027,0.0014206634,0.005117299],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003612683,0.0011206004,0.650533,0.0021014935,0.0004815845,0.0011455622,0.00081557804,0.004209829,0.033907834,0.00409323,0.13283485,0.16514377],"study_design_scores_gemma":[0.0002723109,0.0015320629,0.67455506,0.0011060501,0.00033569927,0.0026171028,0.0010206639,0.0081443405,0.04579675,0.0044222325,0.25994,0.00025770665],"about_ca_topic_score_codex":0.0026785056,"about_ca_topic_score_gemma":0.0038172074,"teacher_disagreement_score":0.012321329,"about_ca_system_score_codex":0.0018780759,"about_ca_system_score_gemma":0.0018433199,"threshold_uncertainty_score":0.06516218},"labels":[],"label_agreement":null},{"id":"W7112601838","doi":"","title":"Viking and Native North American Interactions: The Spread of Disease in the Norse Discovery of North America","year":2024,"lang":"","type":"article","venue":"Digital Commons - USU (Utah State University)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Mainland; Native american; Population; Wildlife; Introduced species; Mainland China","score_opus":0.011127518897553238,"score_gpt":0.25033405610669607,"score_spread":0.23920653720914284,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7112601838","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8495001,0.090901665,0.00039427637,0.00473414,0.00018905089,0.000022966518,0.000145017,0.000005444024,0.054107375],"genre_scores_gemma":[0.94985956,0.0464963,0.00033557366,0.0005508078,0.000057500292,0.00001257977,0.00008114689,0.0000031027614,0.0026034624],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993574,0.00033664663,0.000039112405,0.00007214456,0.00011327182,0.00008145213],"domain_scores_gemma":[0.9984536,0.0009308158,0.0002972321,0.000035019508,0.00019460153,0.00008876008],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010744546,0.0001531661,0.0001992631,0.0009428441,0.0013324331,0.0023357535,0.0002351394,0.00037439764,0.0012896765],"category_scores_gemma":[0.0025073614,0.00008331255,0.00014534914,0.0010591021,0.001341464,0.0017382859,0.0013597757,0.00050616794,0.000060209743],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024892154,0.00011624792,0.33975834,0.004688789,0.00037098647,0.004233965,0.33566305,0.00045132515,0.0030929088,0.025092293,0.005874826,0.28040838],"study_design_scores_gemma":[0.000011239307,0.00023648459,0.41220668,0.0042854836,0.0002853958,0.0018834248,0.4002712,0.00028692296,0.0010976761,0.004220251,0.1751687,0.00004658292],"about_ca_topic_score_codex":0.05823571,"about_ca_topic_score_gemma":0.14533854,"teacher_disagreement_score":0.05823571,"about_ca_system_score_codex":0.0019039124,"about_ca_system_score_gemma":0.002462221,"threshold_uncertainty_score":0.11579347},"labels":[],"label_agreement":null},{"id":"W7117242336","doi":"10.1016/j.bpj.2025.12.027","title":"YaxA prepore formation underlies bipartite YaxAB toxin assembly on living membranes","year":2025,"lang":"en","type":"article","venue":"Biophysical Journal","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Department of Science and Technology, Ministry of Science and Technology, India; International Union of Biochemistry and Molecular Biology; EMBL Australia","keywords":"Membrane; Transmembrane protein; Lipid bilayer; Cell membrane; Pore-forming toxin; Membrane protein; Cell; Monomer","score_opus":0.015804562287588118,"score_gpt":0.3007200633069549,"score_spread":0.28491550101936675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7117242336","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941194,0.00018334537,0.0044720545,0.00007848479,0.000021649015,0.000014562363,0.000054046643,0.00007226911,0.0009842457],"genre_scores_gemma":[0.9973773,0.000078471225,0.001378053,0.000038544833,0.0000052880227,0.000012102788,0.00011438846,0.000020590993,0.00097546936],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980634,0.000017581777,0.00000976444,0.00005484518,0.00004067795,0.00007085997],"domain_scores_gemma":[0.99966955,0.00006247293,0.00008388681,0.00005386099,0.000033552657,0.00009659751],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025850898,0.00023605634,0.000250265,0.00015795624,0.0005350604,0.00070271664,0.0002887333,0.0006616495,0.0014250748],"category_scores_gemma":[0.00040374414,0.00042117585,0.00029135062,0.00011938801,0.0003300023,0.00082174834,0.0007901076,0.0009570723,0.0006786786],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006650043,0.000015341893,0.00031666702,0.00002058709,0.000004369642,0.00012458836,0.000041215604,0.00010642267,0.9978446,0.0009130087,0.00005856544,0.0004881531],"study_design_scores_gemma":[0.000025520356,0.00013404652,0.012937652,0.000013549791,0.000010991378,0.0005138256,0.00015109002,0.013171019,0.9707508,0.00080819894,0.0014642968,0.00001901815],"about_ca_topic_score_codex":0.00032886412,"about_ca_topic_score_gemma":0.0003724658,"teacher_disagreement_score":0.0014250748,"about_ca_system_score_codex":0.0005252713,"about_ca_system_score_gemma":0.00017863253,"threshold_uncertainty_score":0.004767418},"labels":[],"label_agreement":null},{"id":"W7131995369","doi":"","title":"Temperature-dependent variations and intraspecies diversity of the structure of the lipopolysaccharide of Yersinia pestis.","year":2005,"lang":"en","type":"article","venue":"NPARC","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Lipopolysaccharide; Diversity (politics); Bacteria; Yersinia; Virulence; Pathogenicity","score_opus":0.006282420565129087,"score_gpt":0.22474006583028192,"score_spread":0.21845764526515282,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7131995369","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980482,0.0002822211,0.00026987467,0.00003252106,0.000013499822,0.000006931751,0.0006099601,0.000008383366,0.0007284793],"genre_scores_gemma":[0.9983353,0.00012814329,0.00018576761,0.000022698241,0.000006478271,0.000009525976,0.0010200692,0.000010656933,0.0002814356],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998311,0.00003796222,0.000011827994,0.00004333467,0.000029357629,0.000046442387],"domain_scores_gemma":[0.999328,0.0001620597,0.000189368,0.000095946176,0.00013281761,0.00009177801],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023040456,0.00017105193,0.00016296623,0.00046835552,0.00016437782,0.00032757368,0.00014291985,0.0002349653,0.0008657306],"category_scores_gemma":[0.0007328102,0.00017268349,0.000281732,0.00036760006,0.00027074388,0.00025568396,0.00029154596,0.00040223994,0.00041990742],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00056383805,0.00005727227,0.010814304,0.000027753546,0.000041382133,0.000033973367,0.00012707863,0.00013452125,0.98576343,0.00006826606,0.00009871527,0.0022694229],"study_design_scores_gemma":[0.000021438123,0.0007795957,0.83779246,0.000014696752,0.000063519365,0.00038360825,0.00024432925,0.00063743326,0.15905462,0.00013770744,0.0008431457,0.000027574864],"about_ca_topic_score_codex":0.000800028,"about_ca_topic_score_gemma":0.00073166966,"teacher_disagreement_score":0.0008657306,"about_ca_system_score_codex":0.00027063856,"about_ca_system_score_gemma":0.00009476883,"threshold_uncertainty_score":0.00289613},"labels":[],"label_agreement":null},{"id":"W7139225625","doi":"","title":"17 Pinnated Grouse","year":2008,"lang":"","type":"article","venue":"Lincoln (University of Nebraska)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Subspecies; Arid; Habitat; Population; Grassland; Coastal plain","score_opus":0.01856977384230232,"score_gpt":0.22140864930271661,"score_spread":0.2028388754604143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7139225625","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48337913,0.001953299,0.0010322889,0.00023208889,0.0002961447,0.0004077175,0.012610557,0.0004318339,0.49965703],"genre_scores_gemma":[0.49208474,0.0022684487,0.002620505,0.0010960491,0.000113498056,0.00024469564,0.020007607,0.00008399197,0.48148045],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998628,0.000009374633,0.0000060816365,0.000044422486,0.000039465063,0.00003789813],"domain_scores_gemma":[0.9999324,0.000004714783,0.000015778372,0.0000055993705,0.00001568643,0.000025801308],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000055068584,0.00055017223,0.00014984855,0.0007740975,0.0005557018,0.0003422874,0.00031717902,0.00016448113,0.07296192],"category_scores_gemma":[0.000090602945,0.00011595836,0.00018741461,0.0004744774,0.00016156228,0.00019039153,0.00072115514,0.00017996192,0.02064244],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004344929,0.00061386434,0.29859418,0.00052248256,0.00012507441,0.0022013264,0.00124388,0.0002810795,0.02425167,0.0027714658,0.09355799,0.5754025],"study_design_scores_gemma":[0.000027590126,0.00045054936,0.4937711,0.00015638578,0.00003937765,0.0029283508,0.0013290485,0.00018212358,0.0013767023,0.00022775622,0.49948364,0.000027354123],"about_ca_topic_score_codex":0.012252996,"about_ca_topic_score_gemma":0.039329898,"teacher_disagreement_score":0.07296192,"about_ca_system_score_codex":0.00021168201,"about_ca_system_score_gemma":0.0002353103,"threshold_uncertainty_score":0.24408197},"labels":[],"label_agreement":null},{"id":"W7139649730","doi":"","title":"Fleas associated with the northern pocket gopher (<i>Thomomys talpoides</i>) in Elbert County, Colorado","year":2005,"lang":"","type":"article","venue":"ScholarsArchive  (Brigham Young University)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Flea; Abundance (ecology); Relative species abundance; Host (biology); Rodent; Xenopsylla","score_opus":0.006270607005881715,"score_gpt":0.20737065806755728,"score_spread":0.20110005106167556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7139649730","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999233,0.000054458582,0.000029855019,0.000013412444,6.6693826e-7,0.0000073228484,0.00015368259,0.0000020008385,0.0005055578],"genre_scores_gemma":[0.9987733,0.0001239656,0.00014511649,0.000029472027,0.0000019734484,0.00001085668,0.00038936557,0.000001250232,0.0005247167],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998467,0.000019762241,0.0000059927143,0.00004484128,0.000029997138,0.00005270379],"domain_scores_gemma":[0.99974686,0.000025809511,0.00008461242,0.000012033553,0.00004942407,0.000081252314],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013767551,0.00013991036,0.00013756934,0.00057889486,0.0009593583,0.00027143114,0.00019063987,0.0001920053,0.00082136906],"category_scores_gemma":[0.00020162397,0.00012427548,0.00008084504,0.0004178655,0.00035093742,0.00019769275,0.00033490986,0.00015671136,0.000104940904],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006220535,0.000039971543,0.99084353,0.000024497276,0.000023133467,0.00031602444,0.001056837,0.00011139639,0.0039041622,0.00002149753,0.00029730957,0.0032994647],"study_design_scores_gemma":[0.000001272737,0.000021727414,0.9986791,0.0000057057796,0.000005103981,0.000101221114,0.0006905624,0.000056138306,0.00010575357,0.0000033570325,0.0003287471,0.0000012236443],"about_ca_topic_score_codex":0.3058141,"about_ca_topic_score_gemma":0.7651426,"teacher_disagreement_score":0.3058141,"about_ca_system_score_codex":0.0016077306,"about_ca_system_score_gemma":0.0006842855,"threshold_uncertainty_score":0.6080681},"labels":[],"label_agreement":null},{"id":"W7146012603","doi":"","title":"2014 Report on Research Results for Minamata Disease in First Nations Groups in Canada (Preliminary Report)","year":2016,"lang":"en","type":"article","venue":"Institutional Repositories DataBase (IRDB)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Population; Public health; Disease; Government (linguistics)","score_opus":0.02672033702039298,"score_gpt":0.31905188372899973,"score_spread":0.2923315467086067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7146012603","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05660367,0.005482792,0.0011523254,0.0046396903,0.00054132805,0.0010873378,0.8745876,0.00073111424,0.055174112],"genre_scores_gemma":[0.18230206,0.011371206,0.007221543,0.002449947,0.00023699606,0.0010901048,0.700503,0.00029561852,0.09452955],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99356055,0.00030539292,0.0004833767,0.00036448514,0.0036279885,0.0016582294],"domain_scores_gemma":[0.9637183,0.0018345164,0.0019115524,0.0006257254,0.028135944,0.0037739172],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0039147083,0.0009607153,0.00083271123,0.017706376,0.003613942,0.0034477436,0.0019782882,0.0008444835,0.018122654],"category_scores_gemma":[0.010740496,0.0005267446,0.0013261505,0.02560129,0.00063109817,0.0009903084,0.0019926254,0.0010216984,0.0042406972],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00065019005,0.00029687156,0.41950306,0.0018212352,0.0003943269,0.00046509507,0.0009897602,0.0007702198,0.0013660012,0.0015225845,0.48355994,0.088660695],"study_design_scores_gemma":[0.000046808225,0.00008151962,0.80136096,0.00043841198,0.00030092458,0.00014540761,0.0016263439,0.0002983667,0.0023260282,0.00015033426,0.1931671,0.000057794103],"about_ca_topic_score_codex":0.98952067,"about_ca_topic_score_gemma":0.9896371,"teacher_disagreement_score":0.041438024,"about_ca_system_score_codex":0.041438024,"about_ca_system_score_gemma":0.14149013,"threshold_uncertainty_score":0.30065536},"labels":[],"label_agreement":null},{"id":"W7153673097","doi":"","title":"Changes in the Breeding Ranges of Two Grassland Birds","year":2024,"lang":"","type":"article","venue":"Digital Commons - University of South Florida (University of South Florida)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Wildlife; Range (aeronautics); Breeding pair; Grassland; Habitat; Subspecies; Breeding bird survey","score_opus":0.022354616614531538,"score_gpt":0.23461178719071896,"score_spread":0.21225717057618743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7153673097","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99735594,0.00016400515,0.000077913035,0.000036806072,0.000003874366,0.000003894615,0.0001997484,0.0000049726877,0.0021528108],"genre_scores_gemma":[0.99849856,0.00012296389,0.00014890726,0.00002797719,0.000004492281,0.0000059491367,0.00035094572,0.0000027102371,0.00083747914],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997662,0.00005389338,0.000016282547,0.000059034086,0.000041191684,0.00006336478],"domain_scores_gemma":[0.9996164,0.000054169257,0.00014522264,0.00001787224,0.00007305861,0.0000932712],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022210866,0.00012913524,0.00009775595,0.0009704909,0.0005729492,0.00054407504,0.00022081849,0.00021081511,0.0021101476],"category_scores_gemma":[0.0008156605,0.00011446089,0.00011525582,0.0005717507,0.00040004915,0.00037966462,0.00032866353,0.00018955016,0.0004266408],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008425625,0.000060037193,0.97703665,0.000016804084,0.000023058006,0.0002967693,0.0012671677,0.0000824454,0.002699168,0.00012435878,0.00039173046,0.017917473],"study_design_scores_gemma":[0.0000013329033,0.000024364655,0.99854434,0.0000026093967,0.000003506341,0.00017186571,0.00039477332,0.000020963165,0.00010339186,0.000009851856,0.00072111824,0.0000019849558],"about_ca_topic_score_codex":0.015131056,"about_ca_topic_score_gemma":0.054098614,"teacher_disagreement_score":0.015131056,"about_ca_system_score_codex":0.0005247226,"about_ca_system_score_gemma":0.0002119852,"threshold_uncertainty_score":0.03008598},"labels":[],"label_agreement":null},{"id":"W7164909878","doi":"10.1080/17153379.2014.12557148","title":"The Great Manchurian Plague of 1910-1911: The Geopolitics of an Epidemic Disease.","year":2014,"lang":"en","type":"article","venue":"Pacific Affairs","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"","keywords":"Plague (disease); Geopolitics; Pandemic","score_opus":0.009059863140633848,"score_gpt":0.2560677996500993,"score_spread":0.24700793650946545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7164909878","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7025265,0.12359939,0.0017823626,0.034776866,0.0012805638,0.000075438176,0.0026846414,0.00017427104,0.1330999],"genre_scores_gemma":[0.9539932,0.033479095,0.0008062243,0.00080222683,0.00066581124,0.000013893421,0.0005172667,0.000018123877,0.009704127],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99983823,0.000045690133,0.0000056439717,0.000017721757,0.000043587184,0.000049064794],"domain_scores_gemma":[0.9996131,0.00006602011,0.00015048099,0.000024566214,0.00006517832,0.00008061476],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004129077,0.00022795178,0.00012850533,0.0010378764,0.0011709098,0.00104031,0.00023181038,0.0004008271,0.002438183],"category_scores_gemma":[0.0010663312,0.00015061838,0.00010264225,0.0017756571,0.0029357849,0.0011260299,0.0010303349,0.0009549396,0.00013807531],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009097942,0.00017271785,0.31155404,0.0027342765,0.00023591895,0.0043004337,0.041371707,0.003242771,0.024673924,0.14540835,0.05960427,0.40579182],"study_design_scores_gemma":[0.000007854452,0.000097145006,0.81185746,0.00029330442,0.000032576016,0.000552645,0.0088198,0.00019352729,0.000891176,0.0060767275,0.17115122,0.000026524705],"about_ca_topic_score_codex":0.092283696,"about_ca_topic_score_gemma":0.14121589,"teacher_disagreement_score":0.092283696,"about_ca_system_score_codex":0.0031005356,"about_ca_system_score_gemma":0.0036586558,"threshold_uncertainty_score":0.18349308},"labels":[],"label_agreement":null},{"id":"W760998624","doi":"","title":"Bakterie na wojennej ścieżce","year":2010,"lang":"pl","type":"article","venue":"Świat Nauki/Świat nauki","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Medicine","score_opus":0.007034242726877247,"score_gpt":0.2711280022503126,"score_spread":0.26409375952343533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W760998624","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16663212,0.35776952,0.004847475,0.029677693,0.03489247,0.00038688225,0.002387899,0.00063410786,0.4027719],"genre_scores_gemma":[0.33777627,0.27569562,0.0082765985,0.0052594137,0.005239251,0.00026169038,0.0027806077,0.0005065724,0.3642039],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99947613,0.000060268725,0.00006600464,0.000077358236,0.00021451218,0.00010584372],"domain_scores_gemma":[0.9998056,0.0000122058555,0.000023019002,0.000022309227,0.00008558202,0.00005131526],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005211373,0.000683979,0.0009431271,0.0019488382,0.001245333,0.004356308,0.0003063619,0.0008397075,0.028117029],"category_scores_gemma":[0.00061635475,0.00021006729,0.00040147605,0.001521189,0.00090506783,0.0013676311,0.0020235742,0.002546408,0.006623445],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012468676,0.00052043464,0.0064443215,0.0031056826,0.00019187415,0.0043513374,0.0029233787,0.0003193841,0.060644843,0.057369314,0.0749104,0.78797215],"study_design_scores_gemma":[0.000024024203,0.00009140155,0.004698535,0.00029015684,0.00004162673,0.0015681367,0.0007006688,0.000051806634,0.0030668082,0.0020188817,0.9874275,0.000020511985],"about_ca_topic_score_codex":0.003017133,"about_ca_topic_score_gemma":0.0042691366,"teacher_disagreement_score":0.028117029,"about_ca_system_score_codex":0.0008515153,"about_ca_system_score_gemma":0.0018621633,"threshold_uncertainty_score":0.09406084},"labels":[],"label_agreement":null},{"id":"W941513048","doi":"10.1016/j.ijfoodmicro.2015.07.030","title":"Detection of Yersinia enterocolitica in milk powders by cross-priming amplification combined with immunoblotting analysis","year":2015,"lang":"en","type":"article","venue":"International Journal of Food Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Ministry of Science and Technology of the People's Republic of China","keywords":"Yersinia enterocolitica; Microbiology; Enterobacteriaceae; Yersinia; Biology; Priming (agriculture); Bacteria; Escherichia coli; Genetics; Gene","score_opus":0.01316693024411345,"score_gpt":0.29372752902766275,"score_spread":0.2805605987835493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W941513048","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89038897,0.003692522,0.094958715,0.00058737735,0.00039421278,0.00044519122,0.0017673812,0.0008902355,0.006875377],"genre_scores_gemma":[0.87922984,0.0036986903,0.09652477,0.00052650797,0.00023090684,0.0009961481,0.008324582,0.0002694988,0.010199029],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994267,0.000111336194,0.00007808672,0.00013300046,0.00011131835,0.00013967296],"domain_scores_gemma":[0.9994735,0.00021096428,0.000067758214,0.000060940332,0.00013772253,0.000049102684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00060077937,0.0017273526,0.00067481666,0.00096348947,0.00043678447,0.00040258252,0.00052788376,0.0005897369,0.0022500525],"category_scores_gemma":[0.00047384572,0.0005615901,0.000863011,0.00073032064,0.00044135135,0.00050874247,0.0005288883,0.0017221039,0.0015028965],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000076838085,0.000039485432,0.00017863944,0.000044686614,0.000006693183,0.000031151096,0.000022800978,0.000009893629,0.9990965,0.000040743926,0.000026745936,0.00042584367],"study_design_scores_gemma":[0.000022740203,0.00040472028,0.011446609,0.000020950118,0.000075257,0.00036794052,0.00007474687,0.001127278,0.9847328,0.00012813276,0.0015899927,0.000008757319],"about_ca_topic_score_codex":0.00047079095,"about_ca_topic_score_gemma":0.0004674229,"teacher_disagreement_score":0.0022500525,"about_ca_system_score_codex":0.00027062852,"about_ca_system_score_gemma":0.00022477099,"threshold_uncertainty_score":0.0075271726},"labels":[],"label_agreement":null},{"id":"W94997455","doi":"10.1007/0-306-48416-1_94","title":"Evaluation of a One-step Biochemical Screening Test to Determine Pathogenic Strains of Yersinia enterocolitica","year":2004,"lang":"en","type":"article","venue":"Advances in experimental medicine and biology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Health and Long Term Care","funders":"Health Canada; Ontario Ministry of Health and Long-Term Care","keywords":"Yersinia enterocolitica; Pathogenicity; Serotype; Microbiology; Biology; Bacteria; Genetics","score_opus":0.05940462765216419,"score_gpt":0.40430803292194983,"score_spread":0.34490340526978563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W94997455","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9725514,0.0009331671,0.020593261,0.00041554857,0.00020525273,0.0010728157,0.0012243543,0.00040134444,0.0026028757],"genre_scores_gemma":[0.9516344,0.0008992633,0.037081882,0.00030708787,0.000058002497,0.00066563865,0.0040667118,0.000051543102,0.0052354764],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970151,0.00074738765,0.00022122444,0.00044086913,0.0013356843,0.00023974005],"domain_scores_gemma":[0.99695766,0.0011635711,0.00026460807,0.000197588,0.0011373983,0.00027927477],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013923753,0.0016513286,0.00095392746,0.0011039102,0.00039901162,0.00061463506,0.0009780271,0.0013113612,0.001598859],"category_scores_gemma":[0.0024174212,0.00042945117,0.0006872519,0.0007726089,0.00050265,0.00054471457,0.00069231435,0.00084156555,0.0012429109],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007467703,0.0015998965,0.0039478964,0.00011599944,0.00003254056,0.00007309243,0.000058895588,0.00008830885,0.9882883,0.00003875399,0.000106678584,0.004902811],"study_design_scores_gemma":[0.00009898046,0.011130828,0.012039938,0.000011704682,0.00012914177,0.00047628026,0.00012383312,0.0009307692,0.9744203,0.000039146093,0.0005779382,0.000021119808],"about_ca_topic_score_codex":0.0015062769,"about_ca_topic_score_gemma":0.0018562538,"teacher_disagreement_score":0.0016513286,"about_ca_system_score_codex":0.0003722095,"about_ca_system_score_gemma":0.00082022086,"threshold_uncertainty_score":0.007363677},"labels":[],"label_agreement":null}]}