{"meta":{"query_hash":"f691c2823ea6","filters":{"topic":"interferon and immune responses"},"cohort_total":1287,"direct_labels_cover":2,"predictions_cover":1287,"exported":1287,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/f691c2823ea6","api":"https://metacan.xera.ac/api/v1/cohort?topic=interferon+and+immune+responses"},"results":[{"id":"W109151256","doi":"10.4049/jimmunol.190.supp.68.33","title":"The RNA virus sensor melanoma differentiation-associated protein 5 mitigates protection from Coxsackievirus B4 and type 1 diabetes in non-obese diabetic mice. (P5211)","year":2013,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; MDA5; Type 1 diabetes; Coxsackievirus; Immunology; Nod; Autoimmunity; Virology; Virus; Enterovirus; RNA; Immune system; Genetics; Endocrinology; Diabetes mellitus; RNA interference; Gene","score_opus":0.0068787930624214086,"score_gpt":0.2002405528508334,"score_spread":0.193361759788412,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W109151256","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99571556,0.0005746522,0.0008745077,0.0002320324,0.00009440919,0.000042404474,0.0010457707,0.00013978398,0.001280886],"genre_scores_gemma":[0.9881092,0.00049475423,0.0020138891,0.00022509458,0.00003701015,0.000099932564,0.0012556952,0.000063060346,0.007701454],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996014,0.00006758417,0.00004465065,0.0000873613,0.000074460804,0.00012447454],"domain_scores_gemma":[0.99958605,0.000039061888,0.00013964836,0.000037682854,0.000026414244,0.00017109144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031979085,0.0007094476,0.0004997389,0.00058618933,0.00025968038,0.0004467195,0.00037638482,0.00075577106,0.00328941],"category_scores_gemma":[0.00015717032,0.0003406855,0.00044197447,0.00020258536,0.00038508823,0.00040121877,0.0002532807,0.0020562098,0.00074681285],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008740318,0.00028007478,0.0001984973,0.000047712052,0.0000081264525,0.00004368015,0.00001723753,0.00005866036,0.9976591,0.00007020398,0.00008209289,0.0006607065],"study_design_scores_gemma":[0.0002223472,0.0059353802,0.009475846,0.000029543136,0.000048667258,0.0002927782,0.00012816944,0.0016117227,0.9801308,0.0000845505,0.0020248073,0.000015373123],"about_ca_topic_score_codex":0.0009641203,"about_ca_topic_score_gemma":0.001598977,"teacher_disagreement_score":0.00328941,"about_ca_system_score_codex":0.00038537892,"about_ca_system_score_gemma":0.0002284557,"threshold_uncertainty_score":0.01100415},"labels":[],"label_agreement":null},{"id":"W1153183621","doi":"","title":"Molecular Modeling of Retinoschisin and Functional Analysis of Pathogenic Mutations From X-Linked Retinoschisis","year":2010,"lang":"en","type":"article","venue":"Investigative Ophthalmology & Visual Science","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Alexandra Hospital","funders":"","keywords":"Retinoschisis; Genetics; Computational biology; Biology; Botany","score_opus":0.0279208587580544,"score_gpt":0.3027797879722918,"score_spread":0.27485892921423744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1153183621","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9891679,0.00016538923,0.0072821146,0.0001718997,0.000020196838,0.00001878569,0.00045644832,0.00011671684,0.0026005385],"genre_scores_gemma":[0.99405694,0.00012192582,0.004367677,0.000019277635,0.0000026803207,0.000012815823,0.00045237946,0.000038511964,0.0009277839],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9999349,0.0000122124175,0.0000031317604,0.000010252785,0.00002434506,0.0000151572885],"domain_scores_gemma":[0.9999448,0.000015511501,0.000015430736,0.0000036881047,0.000010110742,0.000010450801],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009613028,0.000551236,0.00023786422,0.00018157333,0.0005738539,0.00042061534,0.00054285437,0.00048400776,0.0017349395],"category_scores_gemma":[0.00015984439,0.00016872514,0.0003189505,0.00017296133,0.00020748725,0.00016251017,0.00010688634,0.00049559213,0.00030495386],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00092669297,0.00025744774,0.0035562313,0.00015421156,0.000062781415,0.002382907,0.00022639913,0.32548773,0.64959663,0.012150908,0.00088729936,0.004310799],"study_design_scores_gemma":[0.00012606995,0.00020529103,0.004410347,0.000015884229,0.00006213817,0.00046352437,0.00022192935,0.8055078,0.18319309,0.0015835344,0.004176333,0.000034005483],"about_ca_topic_score_codex":0.008510498,"about_ca_topic_score_gemma":0.005322106,"teacher_disagreement_score":0.008510498,"about_ca_system_score_codex":0.00094953104,"about_ca_system_score_gemma":0.00054501527,"threshold_uncertainty_score":0.016921937},"labels":[],"label_agreement":null},{"id":"W1156893510","doi":"","title":"Correlation of RS1 Expression and Distribution with Retinal Cell Organization and ERG in AAV–RS1 Treated Rs1h Knockout Mice","year":2006,"lang":"en","type":"article","venue":"Investigative Ophthalmology & Visual Science","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Erg; Knockout mouse; Retinal; Expression (computer science); Distribution (mathematics); Biology; Ophthalmology; Cell biology; Medicine; Genetics; Computer science; Gene; Mathematics; Mathematical analysis","score_opus":0.00939519726590531,"score_gpt":0.25347786577276227,"score_spread":0.24408266850685695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1156893510","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932944,0.0006651589,0.0032455383,0.00014450362,0.000031242063,0.000024564382,0.0010202605,0.00015618994,0.0014180992],"genre_scores_gemma":[0.9885052,0.00038681462,0.0025832132,0.00008370848,0.000018325341,0.0000715817,0.0007811091,0.00017451121,0.0073955934],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99954236,0.000044933953,0.000057453148,0.00014369117,0.00010456118,0.0001070568],"domain_scores_gemma":[0.9988697,0.00024377815,0.00044072734,0.00009450939,0.000093567556,0.00025772816],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028672503,0.0003815319,0.0004176061,0.0014885844,0.0002444877,0.0004938749,0.00032752028,0.0006089273,0.0031416963],"category_scores_gemma":[0.00031023225,0.00034008568,0.00028118672,0.0002700728,0.0006191836,0.00041842696,0.00024870413,0.0012312721,0.0005979768],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018353823,0.000033262586,0.00034983715,0.000009685044,0.000004272457,0.00006238895,0.000024722922,0.000029867619,0.99877423,0.000056384953,0.000024885314,0.0004468025],"study_design_scores_gemma":[0.000037152382,0.0002955662,0.031115357,0.000007137741,0.00003539551,0.00066759303,0.00010388794,0.00096017844,0.96589726,0.00008248537,0.00078232406,0.00001566164],"about_ca_topic_score_codex":0.0011788988,"about_ca_topic_score_gemma":0.0017698767,"teacher_disagreement_score":0.0031416963,"about_ca_system_score_codex":0.0003429312,"about_ca_system_score_gemma":0.00016590206,"threshold_uncertainty_score":0.010510027},"labels":[],"label_agreement":null},{"id":"W1160604851","doi":"10.1128/9781555815561.ch5","title":"Interferon Regulatory Factors and the Atypical IKK-Related Kinases TBK1 and IKK-ε: Essential Players in the Innate Immune Response to RNA Virus Infection","year":2014,"lang":"en","type":"book-chapter","venue":"ASM Press eBooks","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"IRF3; TANK-binding kinase 1; Interferon regulatory factors; IRF7; Biology; Small interfering RNA; IκB kinase; IRF4; TRIF; Transcription factor; MDA5; Interferon; Sendai virus; Kinase; Cell biology; IRF8; RNA interference; Innate immune system; Virology; Signal transduction; RNA; Virus; Immunology; Toll-like receptor; Immune system; NF-κB; Genetics; Gene; Protein kinase A","score_opus":0.012696888985630353,"score_gpt":0.23192438220818787,"score_spread":0.21922749322255752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1160604851","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.060707144,0.9126634,0.0117350565,0.0010543054,0.00074044365,0.000054302698,0.0006166064,0.00031323128,0.012115466],"genre_scores_gemma":[0.31147948,0.6315209,0.015857683,0.000713978,0.0013791616,0.00013679567,0.0023120006,0.00008937982,0.036510613],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999238,0.000007778902,0.000009070966,0.000016780827,0.000019749617,0.000022739974],"domain_scores_gemma":[0.99996877,0.0000040271493,0.00001283409,0.000001620795,0.0000049638015,0.000007655894],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014661669,0.00054104615,0.00032456705,0.00030840098,0.00016464433,0.0005159132,0.00027307495,0.00031546637,0.0015847213],"category_scores_gemma":[0.000086918284,0.00012955818,0.00021420674,0.00031370498,0.0001556175,0.00051758834,0.00027003416,0.0005374933,0.0009866849],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00081830623,0.0000955286,0.0014323471,0.003750431,0.000052720603,0.0010304224,0.0002858378,0.0005885554,0.6281636,0.011259606,0.0069708736,0.3455519],"study_design_scores_gemma":[0.000046805206,0.0005703075,0.015128904,0.000492349,0.00013647883,0.00852726,0.0002588629,0.00072924764,0.23917119,0.008014544,0.7268627,0.000061339095],"about_ca_topic_score_codex":0.00018278373,"about_ca_topic_score_gemma":0.00022601808,"teacher_disagreement_score":0.0015847213,"about_ca_system_score_codex":0.0003034356,"about_ca_system_score_gemma":0.00026704275,"threshold_uncertainty_score":0.0053013563},"labels":[],"label_agreement":null},{"id":"W1167266351","doi":"","title":"Further Definition of the Human Foveo–Macular Transcriptome","year":2005,"lang":"en","type":"article","venue":"Investigative Ophthalmology & Visual Science","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Transcriptome; Computational biology; Computer science; Biology; Genetics; Gene; Gene expression","score_opus":0.045686801750548504,"score_gpt":0.3226824472532587,"score_spread":0.27699564550271016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1167266351","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8567601,0.033116203,0.07184401,0.0061816657,0.00033175072,0.000100286,0.006886949,0.00020299756,0.02457618],"genre_scores_gemma":[0.9434192,0.009141852,0.030882616,0.0027153655,0.00034958328,0.00017990629,0.007886054,0.0001041612,0.0053212214],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998348,0.00004361993,0.000012579621,0.000059590333,0.000017428438,0.0000319823],"domain_scores_gemma":[0.9996007,0.00014534104,0.0000542859,0.00009604688,0.000053887077,0.00004968066],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004441432,0.00019611232,0.0003216622,0.00043154779,0.00030820875,0.0010976426,0.0001823633,0.0003721971,0.0021549647],"category_scores_gemma":[0.0005112577,0.00009942331,0.00040569194,0.00037303666,0.0003435878,0.0007372466,0.0009062406,0.000828132,0.00043896664],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046569615,0.000030352494,0.0076399776,0.00020965822,0.000038998467,0.00024016881,0.0006782828,0.00044125298,0.9439932,0.008245822,0.0016316656,0.036384832],"study_design_scores_gemma":[0.00007596978,0.00060821895,0.42658335,0.00069435744,0.00022525208,0.005118648,0.0031665869,0.007803559,0.1834091,0.048302125,0.32389373,0.000119032884],"about_ca_topic_score_codex":0.00057138485,"about_ca_topic_score_gemma":0.0011847313,"teacher_disagreement_score":0.0021549647,"about_ca_system_score_codex":0.00029108714,"about_ca_system_score_gemma":0.0003319479,"threshold_uncertainty_score":0.007209122},"labels":[],"label_agreement":null},{"id":"W119527411","doi":"10.4049/jimmunol.184.supp.39.18","title":"Aberrant activation of STAT3 in primary human endothelial cells by the latent KSHV protein kaposin B (39.18)","year":2010,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"STAT3; Phosphorylation; Gene silencing; Transcription factor; Biology; Cell biology; Kinase; Cancer research; Nuclear protein; Gene; Genetics","score_opus":0.011412682721735217,"score_gpt":0.23807430023560922,"score_spread":0.226661617513874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W119527411","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99297947,0.0015127416,0.002834453,0.000089708876,0.00003476383,0.000021347145,0.0009635117,0.00011266726,0.0014512951],"genre_scores_gemma":[0.9963626,0.0003360548,0.0008050772,0.000044362325,0.000005239079,0.000023474662,0.0009118684,0.00000707666,0.001504235],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998585,0.000022907325,0.000013694068,0.000022610173,0.000035380017,0.00004682846],"domain_scores_gemma":[0.9999496,0.000010131455,0.0000091598795,0.000009546421,0.0000075966327,0.000013914965],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001263949,0.00015311425,0.0001326915,0.00013996962,0.00015496227,0.00024094776,0.00012758313,0.0001955214,0.0017819818],"category_scores_gemma":[0.00008197278,0.0001339065,0.00021527881,0.00015627772,0.00011240621,0.000090134585,0.00010689063,0.0003703742,0.00057777914],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000106774314,0.000025161937,0.00026492932,0.00002009558,0.0000036883484,0.00010554012,0.0000140166185,0.000035112884,0.99874616,0.00007483251,0.00006818992,0.00053540367],"study_design_scores_gemma":[0.000028561273,0.0002904755,0.01370496,0.000004209543,0.000015489994,0.0009897392,0.00003901801,0.0018440536,0.9804434,0.000081792634,0.002554189,0.000004104475],"about_ca_topic_score_codex":0.0012921176,"about_ca_topic_score_gemma":0.00085485773,"teacher_disagreement_score":0.0017819818,"about_ca_system_score_codex":0.0002587114,"about_ca_system_score_gemma":0.00014146058,"threshold_uncertainty_score":0.005961299},"labels":[],"label_agreement":null},{"id":"W137165196","doi":"10.14943/jjvr.57.2.89","title":"Generation of congenic mouse strains by introducing the virus-resistant genes, Mx1 and Oas1b, of feral mouse-derived inbred strain MSM/Ms into the common strain C57BL/6J.","year":2009,"lang":"en","type":"article","venue":"PubMed","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Japan Society for the Promotion of Science; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Congenic; Biology; Virology; Virus; Gene; Inbred strain; Locus (genetics); Strain (injury); Microbiology; Genetics","score_opus":0.02275141270212539,"score_gpt":0.23125104093534912,"score_spread":0.20849962823322374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W137165196","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9647835,0.0015301469,0.02134367,0.00035546575,0.00033287928,0.00174382,0.0047000865,0.000532665,0.0046776948],"genre_scores_gemma":[0.8690715,0.0036241557,0.07266701,0.0006073224,0.00021451706,0.0041087316,0.014481179,0.0006943701,0.034531314],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988311,0.00017064963,0.00020512748,0.00036045135,0.00027550844,0.00015713951],"domain_scores_gemma":[0.99901044,0.000102784026,0.000288464,0.000175007,0.00009933225,0.00032400608],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011022362,0.0014043843,0.0006391527,0.003643722,0.0008678044,0.000558312,0.0012417815,0.0012271684,0.005519331],"category_scores_gemma":[0.0003756278,0.0007402287,0.00096828624,0.00069534447,0.00077011815,0.0005577166,0.0010638407,0.002297384,0.0015839995],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005130957,0.00062874134,0.00064756616,0.0000802088,0.00003646447,0.00024125357,0.00013039017,0.00007973039,0.9943355,0.0009095052,0.0001938684,0.0022035849],"study_design_scores_gemma":[0.000546606,0.003485004,0.012842782,0.00010138047,0.00024147132,0.0024358535,0.00017778002,0.001732706,0.9553371,0.00037585778,0.02265295,0.00007056059],"about_ca_topic_score_codex":0.00064017996,"about_ca_topic_score_gemma":0.0015749638,"teacher_disagreement_score":0.005519331,"about_ca_system_score_codex":0.00045944186,"about_ca_system_score_gemma":0.00040740822,"threshold_uncertainty_score":0.018464029},"labels":[],"label_agreement":null},{"id":"W1437920260","doi":"10.1016/j.molimm.2015.07.011","title":"Duck TRIM27-L enhances MAVS signaling and is absent in chickens and turkeys","year":2015,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Allergy and Infectious Diseases; Alberta Innovates - Technology Futures; Natural Sciences and Engineering Research Council of Canada; U.S. Public Health Service; American Lebanese Syrian Associated Charities","keywords":"Biology; Innate immune system; Gene; Immune system; Genetics; Virology","score_opus":0.013336893603615379,"score_gpt":0.24326705218020145,"score_spread":0.22993015857658608,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1437920260","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974638,0.000667361,0.00039432038,0.000110769746,0.000032989585,0.00000537536,0.00042513036,0.000041860018,0.00085836643],"genre_scores_gemma":[0.99502426,0.0001644518,0.0003420875,0.0001090952,0.000010119506,0.000012482867,0.00059655315,0.000024314912,0.003716687],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997873,0.000020745576,0.000013676948,0.000072871655,0.000027359676,0.00007806127],"domain_scores_gemma":[0.9996643,0.000033737488,0.000095372234,0.000035741577,0.00003298159,0.00013788011],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011321311,0.00027448477,0.0002660958,0.00045868094,0.00025657553,0.00041940855,0.00027554433,0.00046768476,0.0027036027],"category_scores_gemma":[0.0002231494,0.0002678567,0.00031963905,0.000087098575,0.00045346378,0.0002923342,0.00025287966,0.0008999329,0.0007781542],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045764438,0.000013643967,0.0010938391,0.000035208108,0.000009158029,0.0001198656,0.000020450458,0.00003619771,0.9974324,0.00006376021,0.00008887002,0.000628964],"study_design_scores_gemma":[0.00007178758,0.0005364096,0.11794155,0.00003580502,0.00008096675,0.0014778723,0.00075302116,0.001566627,0.8732464,0.00020623278,0.004062832,0.00002052567],"about_ca_topic_score_codex":0.0016656631,"about_ca_topic_score_gemma":0.0021093877,"teacher_disagreement_score":0.0027036027,"about_ca_system_score_codex":0.0005152276,"about_ca_system_score_gemma":0.0002252928,"threshold_uncertainty_score":0.009044468},"labels":[],"label_agreement":null},{"id":"W1494249245","doi":"10.1046/j.0014-2956.2001.02545.x","title":"The interferon alpha induced protein ISG12 is localized to the nuclear membrane","year":2001,"lang":"en","type":"article","venue":"European Journal of Biochemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Gene; Interferon; Molecular biology; Alpha interferon; HeLa; Open reading frame; Nuclear protein; Complementary DNA; Interferon type I; Peptide sequence; Genetics; Cell culture","score_opus":0.012475404020142312,"score_gpt":0.23008780037640947,"score_spread":0.21761239635626717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1494249245","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97841793,0.006247778,0.009361368,0.0005066792,0.00008627706,0.000028240385,0.0009347544,0.0003392858,0.0040777847],"genre_scores_gemma":[0.9773728,0.0027054502,0.0060096607,0.00011048393,0.00003690471,0.000026690643,0.003256087,0.00006368364,0.010418242],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999043,0.000013156829,0.0000047352337,0.000028693748,0.000028893352,0.000020265328],"domain_scores_gemma":[0.99986625,0.000016428135,0.00003340736,0.000018448345,0.00003456539,0.000030885763],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000077766475,0.00046021023,0.00033523762,0.0003465191,0.00036008816,0.0003911367,0.00017547164,0.00034226815,0.0020343019],"category_scores_gemma":[0.000147298,0.0001663072,0.0003548042,0.0004115512,0.00033275556,0.0002109987,0.00025775147,0.00044266912,0.002026898],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000111734415,0.000005756366,0.0005505924,0.000055676075,0.0000069200087,0.00010338417,0.000025198198,0.00002728733,0.99654657,0.00017043119,0.00012699599,0.0022694727],"study_design_scores_gemma":[0.00003452188,0.00022109949,0.036046036,0.000058573238,0.00004769615,0.0015528004,0.00016135031,0.0011349625,0.9305402,0.0004667642,0.029721845,0.000014165293],"about_ca_topic_score_codex":0.0007287984,"about_ca_topic_score_gemma":0.00081026263,"teacher_disagreement_score":0.0020343019,"about_ca_system_score_codex":0.0006155716,"about_ca_system_score_gemma":0.00027862642,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W1498156596","doi":"10.4102/sajr.v13i1.535","title":"Leri-Weill dyschondrosteosis: An under-recognised cause of short stature","year":2009,"lang":"en","type":"article","venue":"South African Journal of Radiology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Medicine; Short stature; Pediatrics","score_opus":0.019594467568264974,"score_gpt":0.26141652671610793,"score_spread":0.24182205914784297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1498156596","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98740965,0.0064851157,0.0010997091,0.0009449242,0.00005438337,0.000019739038,0.00012960748,0.00006835869,0.0037884281],"genre_scores_gemma":[0.9960439,0.0020534345,0.0003939679,0.00019014896,0.00008046853,0.0000045412526,0.00005420294,0.00000940267,0.0011699816],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99989295,0.0000100356065,0.000010163214,0.00002347217,0.000025686031,0.000037736616],"domain_scores_gemma":[0.9997085,0.00006744286,0.00013231409,0.000010430908,0.000016854818,0.00006456769],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000076722354,0.00038808555,0.000487047,0.0008220393,0.00044075333,0.00026637779,0.00020947504,0.00077158946,0.0015277977],"category_scores_gemma":[0.0004754125,0.00016305063,0.0001644791,0.00055034744,0.0005939116,0.0004456539,0.00035283648,0.0006464047,0.00034037887],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000063904816,0.00004242744,0.1290507,0.00013440302,0.000011847747,0.8410504,0.0003669764,0.00007488978,0.01648233,0.00039788516,0.0004351196,0.01188909],"study_design_scores_gemma":[0.0000041222415,0.000086563916,0.05765452,0.000019675063,0.000008305227,0.93847483,0.00018656679,0.000076148,0.0016339683,0.00010263742,0.0017469757,0.000005776602],"about_ca_topic_score_codex":0.0006367684,"about_ca_topic_score_gemma":0.0010332917,"teacher_disagreement_score":0.0015277977,"about_ca_system_score_codex":0.00022114949,"about_ca_system_score_gemma":0.0001989047,"threshold_uncertainty_score":0.005110979},"labels":[],"label_agreement":null},{"id":"W1513631124","doi":"10.1080/15384101.2015.1044187","title":"Ras transformation results in cleavage of reticulon protein Nogo-B that is associated with impairment of IFN response","year":2015,"lang":"en","type":"article","venue":"Cell Cycle","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Dalhousie University","funders":"Canadian Institutes of Health Research; Government of Canada; Beatrice Hunter Cancer Research Institute; National Institutes of Health; Cancer Research Institute","keywords":"Biology; Cleavage (geology); MAPK/ERK pathway; Cell biology; Signal transduction; Interferon; Cancer research; Immunology","score_opus":0.01601390491694676,"score_gpt":0.229046375147591,"score_spread":0.21303247023064423,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1513631124","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99417335,0.0011679548,0.0029360682,0.00005945079,0.00001817277,0.000016889591,0.00031939853,0.00004214583,0.0012665715],"genre_scores_gemma":[0.99395305,0.0005839766,0.0026618552,0.000034316694,0.0000047559092,0.000018809018,0.00069358427,0.000016142549,0.0020335526],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989295,0.000017894652,0.000011363896,0.000024204097,0.000029514662,0.00002407874],"domain_scores_gemma":[0.9999291,0.000008255347,0.000031027263,0.000009448578,0.000005965199,0.000016327109],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000087026594,0.00036160712,0.00016554179,0.0001444202,0.00010225997,0.00018866968,0.00013134391,0.00020365113,0.0008249092],"category_scores_gemma":[0.00006529219,0.00011045834,0.00024069105,0.000091889204,0.00018279575,0.00014341665,0.00014632619,0.00042272563,0.00039093354],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002676597,0.0000050893573,0.000055838245,0.000008340652,0.0000016605134,0.000028366481,0.0000025678098,0.0000077807435,0.99968183,0.000031675834,0.0000046364185,0.00014540857],"study_design_scores_gemma":[0.0000038600438,0.000072636554,0.002183613,0.0000022694885,0.0000047370268,0.00037382392,0.000013261496,0.00024978927,0.9960068,0.000030145955,0.0010570971,0.0000018610353],"about_ca_topic_score_codex":0.00037170353,"about_ca_topic_score_gemma":0.00047039601,"teacher_disagreement_score":0.0008249092,"about_ca_system_score_codex":0.00020073488,"about_ca_system_score_gemma":0.0001434946,"threshold_uncertainty_score":0.0027595758},"labels":[],"label_agreement":null},{"id":"W1526177010","doi":"10.4049/jimmunol.192.supp.74.22","title":"Identifying the DHHC palmitoyl acyltransferase responsible for activating the antiviral protein IFITM3 (VIR1P.1008)","year":2014,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Palmitoylation; Transmembrane protein; Cell biology; Virus; Effector; Biology; Acyltransferases; Population; Virology; Biochemistry; Receptor; Gene; Enzyme; Cysteine; Biosynthesis; Medicine","score_opus":0.021074487799519592,"score_gpt":0.26956938476433456,"score_spread":0.24849489696481497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1526177010","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9781231,0.0020263188,0.015769528,0.00045390395,0.00006196054,0.00008329802,0.0015725602,0.00012422251,0.0017850866],"genre_scores_gemma":[0.97153866,0.0009742575,0.019819833,0.00013785293,0.000018618543,0.000053552845,0.0036811633,0.0000345427,0.0037414306],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999205,0.000013043477,0.000007216301,0.000020613692,0.000020905987,0.000017666076],"domain_scores_gemma":[0.9999273,0.000012613715,0.000020974885,0.000008364074,0.00001237103,0.000018416247],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017877875,0.00029693276,0.00022161598,0.00021771727,0.00015138554,0.0002678835,0.00020423839,0.0003752817,0.0012855197],"category_scores_gemma":[0.00020840167,0.000111076246,0.00031532656,0.00021204786,0.00022004316,0.0001703082,0.00028696787,0.00046615946,0.0010147633],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000084842955,0.00001022401,0.0004414069,0.000024239553,0.000003203427,0.000060669176,0.0000042299557,0.00008600383,0.9976859,0.000080462254,0.000041682644,0.0014771608],"study_design_scores_gemma":[0.000011713014,0.00009968632,0.005067901,0.0000057448287,0.000011063324,0.0005416983,0.000020936197,0.0013538178,0.98941606,0.00014936528,0.003318393,0.0000035904784],"about_ca_topic_score_codex":0.00055738393,"about_ca_topic_score_gemma":0.00065159943,"teacher_disagreement_score":0.0012855197,"about_ca_system_score_codex":0.00051029783,"about_ca_system_score_gemma":0.00026100708,"threshold_uncertainty_score":0.004300475},"labels":[],"label_agreement":null},{"id":"W1535347431","doi":"10.1186/ar3965","title":"Spontaneous aggregation of the anti-viral MAVS protein in systemic lupus erythematosus: a possible cause of excessive type I interferon production","year":2012,"lang":"en","type":"article","venue":"Arthritis Research & Therapy","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; Canadian Arthritis Network; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Arthritis Society; Lupus Research Alliance; Arthritis Foundation","keywords":"Rheumatology; Medicine; Interferon; Immunology; Systemic lupus erythematosus; Interferon type I; Internal medicine; Virology; Disease","score_opus":0.03257550839007613,"score_gpt":0.3078543528549786,"score_spread":0.2752788444649025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1535347431","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99934286,0.00027425672,0.00019050673,0.000011348723,0.0000025213285,0.000002748288,0.000023953318,0.00000573521,0.00014611312],"genre_scores_gemma":[0.99974495,0.000054816086,0.00009286344,0.000007683324,0.000007728755,0.0000021204455,0.00003920474,0.0000015164463,0.000049144135],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99974936,0.00006501144,0.000037497528,0.00006383255,0.000048548274,0.000035762892],"domain_scores_gemma":[0.9996302,0.000097944125,0.00016784406,0.0000328715,0.000028429931,0.000042669875],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019804802,0.00028100528,0.00024225918,0.00061081495,0.00024863135,0.00029538092,0.00012525961,0.0003669824,0.0008217284],"category_scores_gemma":[0.00070940197,0.00020370763,0.00013858682,0.00044597045,0.0002626612,0.00017484384,0.00015852053,0.00027661744,0.00021406423],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016771967,0.00014824448,0.5858967,0.00010077322,0.00006994744,0.01723497,0.0006911964,0.00017454181,0.38415235,0.00015313651,0.0002240754,0.009476917],"study_design_scores_gemma":[0.00007882505,0.001561987,0.8810949,0.0000216477,0.00008974134,0.07340823,0.000404194,0.0010820088,0.041011233,0.00023220727,0.0009965071,0.000018618679],"about_ca_topic_score_codex":0.00025626482,"about_ca_topic_score_gemma":0.0002586162,"teacher_disagreement_score":0.0008217284,"about_ca_system_score_codex":0.0001785915,"about_ca_system_score_gemma":0.00006345638,"threshold_uncertainty_score":0.0027489662},"labels":[],"label_agreement":null},{"id":"W1539559867","doi":"10.1186/ar1395","title":"Protective role of interferon gamma in murine antigen-induced arthritis","year":2004,"lang":"en","type":"article","venue":"Arthritis Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Arthritis Network; School of Medicine, University of California, San Diego; Menzies Institute for Medical Research; National Cancer Institute; Arthritis Society; University of North Carolina at Chapel Hill; Genentech; National Institutes of Health; Biogen; Lupus Research Institute; Pfizer; Natural Sciences and Engineering Research Council of Canada; Dutch Arthritis Association; Oesterreichische Nationalbank; Deutsche Forschungsgemeinschaft; Nuffield Foundation; Physiotherapy Foundation of Canada; Canadian Institutes of Health Research; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Lupus Research Alliance; Wellcome Trust; Newcastle University; National Institute of Allergy and Infectious Diseases; Howard Hughes Medical Institute; Austrian Science Fund; Arthritis Foundation","keywords":"Business","score_opus":0.03186105815324092,"score_gpt":0.32178754165433066,"score_spread":0.28992648350108974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1539559867","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.975502,0.019121243,0.0019038632,0.00015515473,0.00016186369,0.00007634781,0.00044034902,0.000079409074,0.0025597739],"genre_scores_gemma":[0.994261,0.0030361586,0.00075582444,0.00007077264,0.000039703827,0.000047145866,0.00027989494,0.000007187717,0.001502364],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979,0.00007467306,0.00002156283,0.000038754544,0.000034543016,0.000040449362],"domain_scores_gemma":[0.9998435,0.000035596764,0.000039885956,0.000030284573,0.000017835857,0.000032812357],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003030072,0.0005525344,0.00026690352,0.00041243862,0.00010803638,0.0002521574,0.00012693513,0.00036315914,0.0010343337],"category_scores_gemma":[0.00016942045,0.00011193655,0.0002456361,0.0001447555,0.00029001205,0.00013132111,0.00017345729,0.00054901117,0.00031800984],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008053227,0.0000818752,0.00068913854,0.00009131147,0.000006463579,0.00015920828,0.000023223805,0.000060945877,0.993739,0.00006921673,0.00002750139,0.0042467546],"study_design_scores_gemma":[0.00027415156,0.0063053654,0.028596831,0.000113770635,0.00011755318,0.0017955756,0.00011073132,0.0006706111,0.9533067,0.0004029886,0.008292188,0.000013635152],"about_ca_topic_score_codex":0.00018114207,"about_ca_topic_score_gemma":0.00017980601,"teacher_disagreement_score":0.0010343337,"about_ca_system_score_codex":0.0001536267,"about_ca_system_score_gemma":0.00018560354,"threshold_uncertainty_score":0.0034601688},"labels":[],"label_agreement":null},{"id":"W1541047239","doi":"10.1096/fasebj.22.1_supplement.672.39","title":"Molecular interactions regulating RIG‐I signaling to the innate antiviral response","year":2008,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Signal transducing adaptor protein; RIG-I; Cell biology; IRF3; MDA5; Ubiquitin; RNA Helicase A; Phosphorylation; Biology; TRIF; IκB kinase; Signal transduction; Helicase; RNA; RNA interference; Innate immune system; NF-κB; Transcription factor; Gene; Biochemistry; Receptor","score_opus":0.020118909893266628,"score_gpt":0.2656715502297383,"score_spread":0.2455526403364717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1541047239","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92214173,0.03783906,0.009741698,0.0013157991,0.00034245185,0.00010235259,0.000764619,0.0002964304,0.027455771],"genre_scores_gemma":[0.97976583,0.0065865926,0.0025900223,0.00020060832,0.00009583023,0.000037584967,0.0005040564,0.000021561793,0.010197998],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989533,0.000024848421,0.000006860539,0.000018044559,0.00002519574,0.000029751327],"domain_scores_gemma":[0.99994123,0.0000060166403,0.000020485382,0.0000042253982,0.000009056931,0.000018993223],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012351913,0.00033884405,0.00014197287,0.00023095506,0.00025455363,0.0004968657,0.00017329447,0.00029727322,0.0041049966],"category_scores_gemma":[0.00008025276,0.000113957314,0.00026396566,0.00011898999,0.0001648028,0.0003767812,0.00025565078,0.00048367982,0.0018844977],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018546086,0.000021611588,0.00021110442,0.00006926453,0.000008952812,0.00019661582,0.000013534689,0.00007523055,0.99374264,0.0020088858,0.00019595335,0.003270655],"study_design_scores_gemma":[0.00006772618,0.00025303237,0.009947066,0.000036389833,0.000038319522,0.0008856584,0.000085776875,0.0019386105,0.95964473,0.0019208858,0.02516558,0.000016253383],"about_ca_topic_score_codex":0.00014767278,"about_ca_topic_score_gemma":0.00018818423,"teacher_disagreement_score":0.0041049966,"about_ca_system_score_codex":0.00051734643,"about_ca_system_score_gemma":0.00013908526,"threshold_uncertainty_score":0.013732612},"labels":[],"label_agreement":null},{"id":"W1547901250","doi":"10.4049/jimmunol.188.supp.67.7","title":"Genome-wide RNAi screen reveals a novel role of WNT/CTNNB1 signaling pathway in regulation of innate antiviral responses (67.7)","year":2012,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Innate immune system; Biology; Gene knockdown; RNA interference; Wnt signaling pathway; Sendai virus; Interferon; Gene; Immunity; Gene silencing; Genome; RIG-I; Cell biology; Effector; Signal transduction; Genetics; RNA; Immune system","score_opus":0.016498711767026705,"score_gpt":0.2440665735336647,"score_spread":0.227567861766638,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1547901250","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98438,0.0026797405,0.007356837,0.00017069347,0.000033638506,0.00006910624,0.002782092,0.00022570229,0.0023021568],"genre_scores_gemma":[0.9849141,0.0012967438,0.00536985,0.00012137477,0.000007374902,0.00005354639,0.0037590612,0.000062733554,0.004415124],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991345,0.000009193751,0.000008279684,0.00002127692,0.000032636886,0.00001518845],"domain_scores_gemma":[0.9999367,0.000010185345,0.000022572469,0.000005886107,0.0000061117635,0.000018588142],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000105876585,0.00041885496,0.0003019794,0.00028719808,0.00016959404,0.00031440466,0.00017794523,0.00021279724,0.0015774544],"category_scores_gemma":[0.000071190065,0.00017056333,0.00029597123,0.00016707792,0.00017075536,0.000079341844,0.0001629482,0.00036556248,0.00050327444],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002443946,0.000004632806,0.00018990472,0.0000147501505,0.0000034707214,0.00003975793,0.0000024363167,0.000022437818,0.9992582,0.00003223164,0.00001827947,0.00038950297],"study_design_scores_gemma":[0.000021736343,0.00007846961,0.017077435,0.000010727839,0.00005419349,0.00043271147,0.00001791938,0.0014753842,0.9774899,0.000056829504,0.0032789425,0.0000056940803],"about_ca_topic_score_codex":0.0011165806,"about_ca_topic_score_gemma":0.0025280542,"teacher_disagreement_score":0.0015774544,"about_ca_system_score_codex":0.00035823748,"about_ca_system_score_gemma":0.00023092423,"threshold_uncertainty_score":0.005277157},"labels":[],"label_agreement":null},{"id":"W1548339007","doi":"10.1007/978-1-4419-1601-3_5","title":"Viral TNF Inhibitors as Potential Therapeutics","year":2009,"lang":"en","type":"review","venue":"Advances in experimental medicine and biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Howard Hughes Medical Institute","keywords":"Tumor necrosis factor alpha; Cytokine; Immune system; Immunology; Medicine; Biology","score_opus":0.03693793684984671,"score_gpt":0.39820612279183404,"score_spread":0.36126818594198734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1548339007","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00017140694,0.9962322,0.00042601774,0.00044590828,0.00084299804,0.000010544894,0.00002123837,0.000016876409,0.0018327365],"genre_scores_gemma":[0.0014665555,0.99432385,0.0005694175,0.0005886012,0.00071821106,0.00001883395,0.000059771523,0.000003608956,0.0022511731],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998591,0.000024325831,0.000018705055,0.00002475877,0.000054069158,0.000019004041],"domain_scores_gemma":[0.9997509,0.0001254058,0.00003171974,0.000009924659,0.000053619464,0.00002839123],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000636462,0.0012784457,0.0015901482,0.0013358631,0.0002221112,0.0008140516,0.00086642255,0.0011804805,0.0032610728],"category_scores_gemma":[0.00073613704,0.0002952216,0.00037415355,0.0010367329,0.0005434127,0.0012294076,0.0005398366,0.003058852,0.0019361352],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019099002,0.00012199416,0.00008184819,0.0039122603,0.00004733731,0.00026093467,0.000018909957,0.0004797543,0.0027959398,0.003976402,0.046407633,0.941706],"study_design_scores_gemma":[0.00012277855,0.0001709241,0.00037257126,0.0013188148,0.00010622154,0.001245238,0.000025471662,0.00023334101,0.0010772767,0.002725535,0.992585,0.0000167702],"about_ca_topic_score_codex":0.0005474292,"about_ca_topic_score_gemma":0.001635153,"teacher_disagreement_score":0.0032610728,"about_ca_system_score_codex":0.00061590783,"about_ca_system_score_gemma":0.0006719345,"threshold_uncertainty_score":0.010909319},"labels":[],"label_agreement":null},{"id":"W1552800067","doi":"10.1128/jvi.00845-15","title":"Sequence-Specific Modifications Enhance the Broad-Spectrum Antiviral Response Activated by RIG-I Agonists","year":2015,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; RIG-I; Virology; Virus; Innate immune system; TLR3; Influenza A virus; Viral replication; Chikungunya; Dengue virus; Interferon; Viral pathogenesis; TLR7; Antiviral drug; RNA virus; RNA; Immune system; Immunology; Toll-like receptor; Gene","score_opus":0.034781589108555444,"score_gpt":0.29664893305733453,"score_spread":0.2618673439487791,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1552800067","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99238867,0.0021556201,0.0033015371,0.00007243145,0.000052812822,0.00003541853,0.00015579339,0.00008414183,0.0017535393],"genre_scores_gemma":[0.99511826,0.0005872205,0.002995624,0.000077168064,0.000020324416,0.000024609908,0.00013836745,0.000011210035,0.00102725],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989533,0.000023561264,0.00001185933,0.000025455813,0.000020388941,0.000023448558],"domain_scores_gemma":[0.999923,0.000014088152,0.0000329544,0.00000970899,0.000008613772,0.000011764493],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000102871636,0.0003733517,0.00016405995,0.00006720854,0.000070743554,0.0001878089,0.0001499915,0.00027708942,0.0018097173],"category_scores_gemma":[0.0001164055,0.00006739555,0.00019002102,0.000055469463,0.00015198534,0.00014629759,0.00016562783,0.00035368197,0.000555491],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013383279,0.000018413373,0.00008763025,0.000037941023,0.0000024109481,0.000024301644,0.00000390598,0.00006184179,0.998187,0.00003641022,0.000016033926,0.0013901994],"study_design_scores_gemma":[0.000015078746,0.0006287367,0.00092895253,0.0000059361796,0.00001115382,0.00021169918,0.00000780704,0.00031691766,0.9963504,0.000016845413,0.0015036587,0.0000027793858],"about_ca_topic_score_codex":0.00005854463,"about_ca_topic_score_gemma":0.000095372074,"teacher_disagreement_score":0.0018097173,"about_ca_system_score_codex":0.000120370285,"about_ca_system_score_gemma":0.00007981263,"threshold_uncertainty_score":0.0060541034},"labels":[],"label_agreement":null},{"id":"W1558682953","doi":"10.4049/jimmunol.192.supp.124.4","title":"Tyrosine phosphorylation of IFITM3 blocks an endocytic motif necessary for its complete influenza virus restriction (INM8P.438)","year":2014,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"FYN; Phosphorylation; Cell biology; Endocytosis; Tyrosine phosphorylation; Endocytic cycle; Endosome; Tyrosine; Biology; Tyrosine kinase; Population; Protein tyrosine phosphatase; Cytoplasm; Src family kinase; Proto-oncogene tyrosine-protein kinase Src; Influenza A virus; Virology; Cell; Virus; Signal transduction; Biochemistry","score_opus":0.029824515101846503,"score_gpt":0.2751787799707864,"score_spread":0.24535426486893988,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1558682953","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99660766,0.00033735798,0.001230339,0.0000966121,0.000030528383,0.000019757768,0.0002135812,0.0000423112,0.0014218839],"genre_scores_gemma":[0.9970196,0.00015513433,0.0013947377,0.00003545096,0.0000059751715,0.000026571353,0.00036393938,0.000017749018,0.0009808709],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986815,0.000030213401,0.000015528723,0.000015870708,0.000027189999,0.00004307233],"domain_scores_gemma":[0.9998994,0.00002738232,0.000025715264,0.000014798698,0.0000075889307,0.000025024909],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015845028,0.00026657418,0.00017118637,0.00009435198,0.00016323217,0.0001368016,0.00026078298,0.0002782333,0.002465321],"category_scores_gemma":[0.000146506,0.00010080355,0.00019984953,0.00006503474,0.00022413582,0.00013335515,0.00014510957,0.00050122995,0.00046286514],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015767686,0.00003746808,0.00006785,0.000014372689,0.0000029171972,0.00003352581,0.000004450146,0.000043468786,0.9991013,0.00013983445,0.000034332246,0.00036293114],"study_design_scores_gemma":[0.000031486565,0.00028935046,0.0014397665,0.000004738561,0.000006516684,0.00021460294,0.000008210864,0.0009384647,0.99575007,0.00004982347,0.001264878,0.000002089885],"about_ca_topic_score_codex":0.0007157841,"about_ca_topic_score_gemma":0.0006124084,"teacher_disagreement_score":0.002465321,"about_ca_system_score_codex":0.000313398,"about_ca_system_score_gemma":0.00021578619,"threshold_uncertainty_score":0.008247256},"labels":[],"label_agreement":null},{"id":"W1572496322","doi":"10.1089/107999002753452638","title":"Review: IRF Regulation of HIV-1 Long Terminal Repeat Activity","year":2002,"lang":"en","type":"review","venue":"Journal of Interferon & Cytokine Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; Istituto Superiore di Sanità","keywords":"Terminal (telecommunication); Long terminal repeat; Human immunodeficiency virus (HIV); Biology; Computational biology; Genetics; Virology; Computer science; Gene; Telecommunications; Gene expression","score_opus":0.12443220806361056,"score_gpt":0.4187531522971425,"score_spread":0.29432094423353194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1572496322","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003320242,0.99043393,0.00046578323,0.00084621646,0.0038650448,0.000015017508,0.000050488805,0.000031051073,0.0039605075],"genre_scores_gemma":[0.0017677217,0.9874505,0.00063428615,0.0008557871,0.002576687,0.000016515867,0.00013937677,0.0000076281353,0.006551599],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998847,0.0000165562,0.000016993732,0.000026495769,0.000043506567,0.0000117126265],"domain_scores_gemma":[0.99975795,0.00006730772,0.000034827466,0.000007717631,0.000092151815,0.00004013846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033083046,0.001236968,0.0011543065,0.001252968,0.000369438,0.0008887588,0.0010948683,0.0010502227,0.0068844003],"category_scores_gemma":[0.00048654564,0.00019776025,0.0002503299,0.0017530333,0.00032658395,0.0016358776,0.0003717783,0.0012481207,0.0077629928],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000119669516,0.00005773609,0.00020492778,0.00864322,0.000051155443,0.00046940835,0.00005834741,0.0002896864,0.0040968326,0.0019946403,0.13556133,0.848453],"study_design_scores_gemma":[0.000012585418,0.000039141352,0.0005783633,0.0007423,0.000035160137,0.0014922183,0.000025329877,0.000047622416,0.0005675306,0.00076954067,0.99568033,0.00000979402],"about_ca_topic_score_codex":0.0005246081,"about_ca_topic_score_gemma":0.00073326397,"teacher_disagreement_score":0.0068844003,"about_ca_system_score_codex":0.00050619163,"about_ca_system_score_gemma":0.00066887855,"threshold_uncertainty_score":0.02303058},"labels":[],"label_agreement":null},{"id":"W1578107273","doi":"10.2741/s102","title":"Broad-spectrum and virus-specific nucleic acid-based antivirals against influenza","year":2009,"lang":"en","type":"review","venue":"Frontiers in Bioscience-Scholar","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Defence Research and Development Canada","funders":"Centers for Disease Control and Prevention","keywords":"Nucleic acid; Virology; Biology; RNA; Influenza A virus; Oligonucleotide; Virus; Deoxyribozyme; Gene silencing; Innate immune system; Small interfering RNA; Viral replication; RNA interference; Gene; DNA; Immune system; Biochemistry; Immunology","score_opus":0.031536346769584105,"score_gpt":0.29117940947300613,"score_spread":0.259643062703422,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1578107273","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00044149382,0.9936128,0.0006137624,0.00027969247,0.00040116132,0.000011252069,0.000012031035,0.000016502823,0.004611217],"genre_scores_gemma":[0.0024972104,0.99141157,0.00079107704,0.00022176646,0.00027633313,0.000016812053,0.000035083864,0.0000028043773,0.0047473563],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999031,0.000015536289,0.000008795693,0.000017178663,0.00004423399,0.0000111193385],"domain_scores_gemma":[0.9999207,0.00002564122,0.0000110084275,0.0000036383633,0.000025222515,0.0000137622155],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003787137,0.0007975948,0.00075556,0.0010824719,0.00027373916,0.00044134544,0.0006432928,0.00078843115,0.002838613],"category_scores_gemma":[0.0002594448,0.0002087688,0.00020880901,0.0011687396,0.00045426114,0.001025374,0.00038983233,0.0011101209,0.0030047828],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000079900616,0.0000962717,0.000095806885,0.0044583883,0.000030200266,0.00020181772,0.000052393705,0.00050521264,0.010665533,0.005845688,0.029778412,0.9481904],"study_design_scores_gemma":[0.000016866124,0.00008503169,0.00037665403,0.000524965,0.000014503861,0.0006663183,0.000027308233,0.00009351755,0.001696901,0.0017192663,0.99477094,0.000007801639],"about_ca_topic_score_codex":0.0005589739,"about_ca_topic_score_gemma":0.0012180766,"teacher_disagreement_score":0.002838613,"about_ca_system_score_codex":0.0005086588,"about_ca_system_score_gemma":0.00049812405,"threshold_uncertainty_score":0.009496093},"labels":[],"label_agreement":null},{"id":"W1578788305","doi":"10.1074/jbc.m108019200","title":"Poxvirus Infection Rapidly Activates Tyrosine Kinase Signal Transduction","year":2001,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; University Health Network; University of Toronto; Canadian Blood Services","funders":"National Cancer Institute; National Institutes of Health; Canadian Institutes of Health Research; U.S. Department of Veterans Affairs","keywords":"Signal transduction; Tyrosine kinase; Cancer research; Transduction (biophysics); Tyrosine; Cell biology; Medicine; Biology; Virology; Biochemistry","score_opus":0.02137915067535077,"score_gpt":0.25424277493423264,"score_spread":0.23286362425888188,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1578788305","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9893881,0.003017247,0.004669695,0.00008825608,0.000051359228,0.000059017726,0.00013200604,0.000059055616,0.0025353197],"genre_scores_gemma":[0.9941408,0.0015408678,0.0018857064,0.000044845892,0.000020009154,0.000050553328,0.0002718883,0.00000696823,0.002038305],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998642,0.000027334969,0.000007086815,0.000020228988,0.000037747915,0.000043389613],"domain_scores_gemma":[0.99994814,0.000018301844,0.000012037009,0.000007776436,0.0000039817096,0.000009845001],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012556899,0.00027846443,0.00015028068,0.0001125215,0.0001318818,0.00033417248,0.00010937,0.0002549814,0.0013026871],"category_scores_gemma":[0.00010576377,0.00010005198,0.00021720181,0.00006885552,0.00013154282,0.00027554066,0.0002870133,0.0005148979,0.00032491534],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054694854,0.000019268744,0.00022766973,0.00002897523,0.000002922643,0.00008545223,0.000011693304,0.000020957592,0.998042,0.00022034167,0.00002879024,0.0012570912],"study_design_scores_gemma":[0.000021291902,0.0004886051,0.010719641,0.000014370432,0.000011858473,0.00072116154,0.00003350153,0.0010396701,0.9815129,0.0002502344,0.0051812655,0.000005574277],"about_ca_topic_score_codex":0.0001026818,"about_ca_topic_score_gemma":0.00017892933,"teacher_disagreement_score":0.0013026871,"about_ca_system_score_codex":0.00019257753,"about_ca_system_score_gemma":0.0000916579,"threshold_uncertainty_score":0.004357934},"labels":[],"label_agreement":null},{"id":"W1584738578","doi":"10.1186/ar1447","title":"Oxidation in rheumatoid arthritis.","year":2004,"lang":"en","type":"review","venue":"Arthritis Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":561,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Cell biology; Oxidative stress; Transcription factor; Synovitis; Cytokine; Reactive oxygen species; Signal transduction; Inflammation; Hypoxia (environmental); Biology; Tumor necrosis factor alpha; Intracellular; Chemistry; Rheumatoid arthritis; Immunology; Biochemistry; Gene; Oxygen","score_opus":0.08042417332690423,"score_gpt":0.3945653698736849,"score_spread":0.3141411965467807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1584738578","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009681372,0.99630165,0.000087652705,0.000260522,0.0006732761,0.0000053868634,0.000012189066,0.000009002305,0.0025535643],"genre_scores_gemma":[0.001691683,0.9875329,0.0003308554,0.00071977376,0.0009122295,0.000015238764,0.00006256038,0.0000036617216,0.008731135],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998159,0.000027304468,0.000021795193,0.0000334283,0.000078423465,0.000023158374],"domain_scores_gemma":[0.99985516,0.000028350087,0.000028077067,0.000008851734,0.0000467167,0.00003279691],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040667993,0.0014793728,0.0013802253,0.0018587558,0.00046275771,0.0009333743,0.00092738325,0.0017298853,0.007635862],"category_scores_gemma":[0.000354142,0.0002645875,0.0003299463,0.001809427,0.0006098034,0.0010577958,0.0007044332,0.0014296174,0.012553251],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009601618,0.000069384245,0.00020936748,0.0067987433,0.000036471305,0.0005300277,0.00009457753,0.00013858857,0.004206191,0.0029746324,0.066639535,0.9182065],"study_design_scores_gemma":[0.000014750254,0.000064485466,0.0006941982,0.0007250127,0.00002187245,0.0023809948,0.00004123415,0.000020252202,0.00043051035,0.0015685251,0.99403,0.000008193491],"about_ca_topic_score_codex":0.0012566898,"about_ca_topic_score_gemma":0.0025029965,"teacher_disagreement_score":0.007635862,"about_ca_system_score_codex":0.0005797785,"about_ca_system_score_gemma":0.000680553,"threshold_uncertainty_score":0.025544524},"labels":[],"label_agreement":null},{"id":"W1595171673","doi":"10.3390/biology4030460","title":"Sensors of Infection: Viral Nucleic Acid PRRs in Fish","year":2015,"lang":"en","type":"review","venue":"Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University; University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada","keywords":"Nucleic acid; Biology; Innate immune system; Pattern recognition receptor; Pathogen-associated molecular pattern; Lytic cycle; Receptor; Viral replication; Virology; Virus; Immune system; Cell biology; Immunology; Biochemistry","score_opus":0.04944159555890823,"score_gpt":0.3393170026268068,"score_spread":0.2898754070678986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1595171673","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003365199,0.9963709,0.00034439843,0.00023699114,0.00024919523,0.0000074825716,0.000024844287,0.000014821031,0.002414874],"genre_scores_gemma":[0.0015407813,0.9955342,0.00044481506,0.00018647828,0.00015321976,0.000007808914,0.000048941296,0.0000026806945,0.0020810124],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998894,0.000011872647,0.000015111539,0.000026622993,0.000045526656,0.000011419262],"domain_scores_gemma":[0.9999167,0.000024439918,0.000016992233,0.000002846816,0.000027540638,0.000011485268],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002733753,0.00072426064,0.0007178269,0.001930473,0.00025820205,0.0006701873,0.0005065459,0.000877776,0.0025967788],"category_scores_gemma":[0.00026994818,0.00024248124,0.00035601886,0.001266953,0.0003519279,0.0012862239,0.00052356505,0.0012039549,0.001863291],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000062002706,0.000048449525,0.00024743436,0.011677767,0.000047670645,0.00024784388,0.00009964975,0.0003505128,0.012507989,0.0036836478,0.017104171,0.95392287],"study_design_scores_gemma":[0.000005417436,0.00008195831,0.00082813686,0.0013422357,0.00004033604,0.0015122626,0.000055743363,0.00007186864,0.0016430578,0.0010366406,0.9933674,0.0000150028945],"about_ca_topic_score_codex":0.0009034408,"about_ca_topic_score_gemma":0.0013158413,"teacher_disagreement_score":0.0025967788,"about_ca_system_score_codex":0.0005373619,"about_ca_system_score_gemma":0.0005991229,"threshold_uncertainty_score":0.008687019},"labels":[],"label_agreement":null},{"id":"W1598861942","doi":"10.1186/ar1752","title":"Somatic mutations in the mitochondria of rheumatoid arthritis synoviocytes","year":2005,"lang":"en","type":"article","venue":"Arthritis Research & Therapy","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; University Health Network; University of Toronto; York University","funders":"Canadian Institutes of Health Research","keywords":"Somatic cell; Mitochondrial DNA; Biology; Immune system; Major histocompatibility complex; Mitochondrion; Germline mutation; Mutation; Genetics; Gene; Autoimmunity; Epitope; Pathogenesis; Rheumatoid arthritis; Autoimmune disease; Immunology; Antigen; Antibody","score_opus":0.035158340123869807,"score_gpt":0.32940387010314626,"score_spread":0.29424552997927644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1598861942","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961461,0.002069986,0.0011305576,0.000043520715,0.0000107749265,0.000010040616,0.000087886096,0.000015262878,0.00048579098],"genre_scores_gemma":[0.99883133,0.00037214835,0.000449664,0.000014065714,0.0000035661067,0.000005248921,0.00008531926,0.0000019449349,0.00023670997],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998629,0.00002546424,0.0000153,0.00003161571,0.000044865916,0.000019927898],"domain_scores_gemma":[0.99986196,0.000030572217,0.000053050528,0.000013825786,0.000020863674,0.000019766409],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000119183045,0.00014989056,0.00008470516,0.00027271462,0.00011075599,0.00017073417,0.000091934606,0.00021633419,0.00071048376],"category_scores_gemma":[0.00026689717,0.000060619364,0.00010108674,0.000103380335,0.0001389074,0.00009076007,0.00015602267,0.0001228988,0.00020070655],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009706043,0.0000070891397,0.004548433,0.000036806658,0.000009151458,0.00032370022,0.00003543188,0.000018816112,0.9929416,0.00005088186,0.00001622287,0.00191479],"study_design_scores_gemma":[0.000056938385,0.001048116,0.22048643,0.000046824087,0.000083135485,0.016530849,0.00034209003,0.0008325153,0.75481063,0.00033102444,0.0054151756,0.000016336007],"about_ca_topic_score_codex":0.00025752228,"about_ca_topic_score_gemma":0.00028692902,"teacher_disagreement_score":0.00071048376,"about_ca_system_score_codex":0.0001118754,"about_ca_system_score_gemma":0.000056557124,"threshold_uncertainty_score":0.0023767948},"labels":[],"label_agreement":null},{"id":"W1601666716","doi":"10.4049/jimmunol.188.supp.117.8","title":"Type I interferon induces necroptosis in macrophages during Salmonella Typhimurium infection (117.8)","year":2012,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Necroptosis; Programmed cell death; Inflammasome; Interferon; Immune system; Biology; Microbiology; Macrophage; Cell biology; In vivo; Apoptosis; Immunology; In vitro; Biochemistry; Inflammation","score_opus":0.014949765873464103,"score_gpt":0.2557595570866265,"score_spread":0.2408097912131624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1601666716","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976974,0.0005830413,0.0006218457,0.0000477929,0.000024061248,0.000017843988,0.00028579612,0.000036073252,0.00068625447],"genre_scores_gemma":[0.99682873,0.00033605733,0.001028006,0.00004910913,0.000012700706,0.000036692472,0.00045924023,0.000015317111,0.001234099],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985814,0.00003718572,0.000020216137,0.00001818173,0.000022173457,0.000044006527],"domain_scores_gemma":[0.9998809,0.000019462666,0.000037967624,0.00001937012,0.000013697287,0.000028481381],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002496811,0.00040567858,0.00023684742,0.00018263441,0.00010212568,0.00019364493,0.00009797385,0.0003444888,0.0009190837],"category_scores_gemma":[0.00012575077,0.00015081397,0.00027533452,0.000100743964,0.000165835,0.00012717661,0.00018755299,0.00045161595,0.00060205365],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020522813,0.000014944902,0.0001885878,0.000019947727,0.0000014359679,0.000063500964,0.000007836452,0.000015146094,0.9992231,0.000018025103,0.00001538238,0.00022679991],"study_design_scores_gemma":[0.0000633547,0.0011127277,0.013216929,0.000019047802,0.000021104392,0.00071329024,0.00005837912,0.00061486027,0.9830161,0.00006886211,0.001089444,0.0000059136005],"about_ca_topic_score_codex":0.00013880689,"about_ca_topic_score_gemma":0.0002187214,"teacher_disagreement_score":0.0009190837,"about_ca_system_score_codex":0.00022190713,"about_ca_system_score_gemma":0.00008584211,"threshold_uncertainty_score":0.0030745864},"labels":[],"label_agreement":null},{"id":"W1603488459","doi":"10.1186/1743-422x-2-75","title":"Constitutive expression of Atlantic salmon Mx1 protein in CHSE-214 cells confers resistance to Infectious Salmon Anaemia virus","year":2005,"lang":"en","type":"article","venue":"Virology Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Prince Edward Island","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Virology; Cytopathic effect; Virus; Interferon; Cell culture; Viral replication; Embryo; Infectious hematopoietic necrosis virus; Molecular biology; Fish <Actinopterygii>; Cell biology; Genetics","score_opus":0.007374530174751825,"score_gpt":0.23645038853763484,"score_spread":0.22907585836288302,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1603488459","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982572,0.00018918277,0.00057943776,0.000034497785,0.00001606421,0.000017481043,0.00034865478,0.000025118097,0.00053225295],"genre_scores_gemma":[0.99218035,0.00024048837,0.0021375783,0.000033148914,0.000010995737,0.000060522023,0.0024295577,0.000018667579,0.0028886937],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997868,0.000039168266,0.000032524877,0.00003809643,0.000060569728,0.000042918553],"domain_scores_gemma":[0.99979025,0.000066126275,0.00003991728,0.00004917477,0.000021281501,0.00003316538],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015995081,0.00028324238,0.00025670353,0.00016210934,0.0001687385,0.00025712408,0.00018275478,0.00027064528,0.0012039463],"category_scores_gemma":[0.00017955861,0.00017323201,0.00031668047,0.00016987952,0.0002171718,0.00012166156,0.0002516415,0.00056799955,0.00052606495],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038309092,0.00001159518,0.00015255326,0.0000088405595,0.0000012500993,0.000016964397,0.000011470206,0.000015385776,0.99961436,0.000021115959,0.000009142909,0.000099157405],"study_design_scores_gemma":[0.000024737006,0.0007106612,0.012316089,0.0000063441553,0.000012673236,0.0002677394,0.00006356761,0.0013782184,0.98343235,0.000035992405,0.0017433556,0.000008362562],"about_ca_topic_score_codex":0.0009877938,"about_ca_topic_score_gemma":0.0012867765,"teacher_disagreement_score":0.0012039463,"about_ca_system_score_codex":0.00029881188,"about_ca_system_score_gemma":0.00021547452,"threshold_uncertainty_score":0.004027605},"labels":[],"label_agreement":null},{"id":"W1604840148","doi":"10.1111/cmi.12165","title":"Nutrient sensing and metabolic stress pathways in innate immunity","year":2013,"lang":"en","type":"review","venue":"Cellular Microbiology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Burroughs Wellcome Fund","keywords":"Biology; Innate immune system; PI3K/AKT/mTOR pathway; AMPK; Signal transduction; Nutrient sensing; Immunity; Cell biology; Adaptation (eye); Metabolic pathway; Phosphorylation; Immunology; Immune system; Biochemistry; Neuroscience; Enzyme; Protein kinase A","score_opus":0.030349602043973932,"score_gpt":0.25665189662578947,"score_spread":0.22630229458181553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1604840148","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007547594,0.9983809,0.00011219391,0.00022758942,0.00028600334,0.0000025217282,0.000007363265,0.000006693379,0.00090130226],"genre_scores_gemma":[0.00060762,0.99772745,0.00016161478,0.00014259135,0.00032404577,0.000004492546,0.000018779127,0.0000013409597,0.0010120026],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99986196,0.00002144676,0.00001820498,0.000023158007,0.000057744954,0.00001745381],"domain_scores_gemma":[0.99979836,0.00006472936,0.00003554651,0.0000075129024,0.000056669407,0.000037271402],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046018392,0.00096887926,0.0010820647,0.0015678506,0.00030765828,0.0010052094,0.0008634326,0.0012072962,0.003654724],"category_scores_gemma":[0.00038190486,0.00025139403,0.00029531447,0.0020425897,0.0006864455,0.0016883035,0.0008052618,0.0018211772,0.0033160155],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005989043,0.000050581446,0.00012791072,0.0075303414,0.000038108272,0.00015682833,0.00004953362,0.00033989866,0.0028725264,0.0052142628,0.0398781,0.94368196],"study_design_scores_gemma":[0.000008108201,0.000045424906,0.0005867534,0.0016737758,0.000025556117,0.0008537343,0.000046104,0.00006359464,0.00029984672,0.0029737644,0.9934117,0.000011602881],"about_ca_topic_score_codex":0.00058983197,"about_ca_topic_score_gemma":0.0010760629,"teacher_disagreement_score":0.003654724,"about_ca_system_score_codex":0.00075997104,"about_ca_system_score_gemma":0.0009349065,"threshold_uncertainty_score":0.012226224},"labels":[],"label_agreement":null},{"id":"W1611944043","doi":"10.1038/nri3845","title":"Type I interferons in anticancer immunity","year":2015,"lang":"en","type":"review","venue":"Nature reviews. Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1301,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Cancer Research; Ligue Contre le Cancer; Institut National Du Cancer; Association pour la Recherche sur le Cancer","keywords":"Oncolytic virus; Immunosurveillance; Paracrine signalling; Autocrine signalling; Biology; Immune system; Interferon; Immunology; Cancer research; Interferon type I; Cancer cell; Immunity; Cancer; Cell culture; Receptor; Genetics","score_opus":0.06371510262459042,"score_gpt":0.3952222347160464,"score_spread":0.331507132091456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1611944043","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000053044936,0.9972646,0.00010889348,0.00063371216,0.001078521,0.000003078976,0.000013927667,0.000006673951,0.000837448],"genre_scores_gemma":[0.0006053804,0.9958675,0.00012812152,0.00062522094,0.0013880304,0.0000067975975,0.0000331531,0.0000018824203,0.0013440473],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998109,0.000030278125,0.000021648833,0.000025310437,0.00007817061,0.000033711975],"domain_scores_gemma":[0.99969125,0.000111167436,0.000053641375,0.000011807036,0.00007679677,0.000055407454],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006632721,0.0011129216,0.0014265254,0.001194057,0.00034130123,0.001192943,0.00090797397,0.0015301264,0.004309336],"category_scores_gemma":[0.00063934433,0.00035919243,0.00043363293,0.0015209762,0.0006984769,0.0015518152,0.0012151407,0.0031211905,0.0034856615],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000114992865,0.00004108918,0.00009484564,0.005094993,0.00003990602,0.00010262099,0.000025580315,0.0002376145,0.0018561016,0.0051202755,0.101100266,0.88617164],"study_design_scores_gemma":[0.000018741548,0.000035859775,0.0003887265,0.0016249442,0.00003886707,0.00042696533,0.000024153283,0.00006959201,0.00020887969,0.0034856885,0.99366486,0.000012660431],"about_ca_topic_score_codex":0.00041835516,"about_ca_topic_score_gemma":0.0011670752,"teacher_disagreement_score":0.004309336,"about_ca_system_score_codex":0.00074260094,"about_ca_system_score_gemma":0.00094606646,"threshold_uncertainty_score":0.014416158},"labels":[],"label_agreement":null},{"id":"W1642847216","doi":"10.4049/jimmunol.0902589","title":"Absence of SHIP-1 Results in Constitutive Phosphorylation of Tank-Binding Kinase 1 and Enhanced TLR3-Dependent IFN-β Production","year":2010,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Terry Fox Research Institute; BC Cancer Agency; Stemcell Technologies","funders":"Science Foundation Ireland; European Commission; Higher Education Authority; Health Research Board","keywords":"TRIF; Cell biology; TANK-binding kinase 1; Biology; TLR3; Cytokine; TLR4; Phosphorylation; Toll-like receptor; Signal transduction; Immunology; Immune system; Innate immune system; Protein kinase A; Cyclin-dependent kinase 2","score_opus":0.010546730440666634,"score_gpt":0.24788948894287824,"score_spread":0.2373427585022116,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1642847216","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99655765,0.0004873369,0.001456672,0.00011093,0.000050404917,0.000019207197,0.0005785252,0.00007832168,0.00066104886],"genre_scores_gemma":[0.99490875,0.0003976713,0.0014053708,0.000044521377,0.000016040893,0.000044892735,0.0010144989,0.000037287016,0.0021310213],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99968016,0.000042672495,0.000058557183,0.00005085184,0.00008056529,0.00008730163],"domain_scores_gemma":[0.99958843,0.000061212435,0.00014409603,0.000055966677,0.000018742752,0.00013162717],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022388014,0.00054642436,0.00032555126,0.00022290912,0.00016834988,0.0004886425,0.00036935293,0.0003863414,0.002379022],"category_scores_gemma":[0.0001814719,0.0003368184,0.00043021352,0.00019311628,0.0004170497,0.0002691274,0.0003104234,0.0011849626,0.0008054206],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018140602,0.0000439292,0.00011989029,0.000032288284,0.000009562942,0.000085896165,0.000010385237,0.00008395961,0.9989793,0.000116029565,0.000026595157,0.00031084247],"study_design_scores_gemma":[0.00006246705,0.000259257,0.0047412114,0.000010438287,0.000030197214,0.0005784961,0.000029308532,0.0016199021,0.9908013,0.00007810996,0.0017807762,0.000008559859],"about_ca_topic_score_codex":0.0005496489,"about_ca_topic_score_gemma":0.00048073442,"teacher_disagreement_score":0.002379022,"about_ca_system_score_codex":0.00041156667,"about_ca_system_score_gemma":0.00032135504,"threshold_uncertainty_score":0.007958651},"labels":[],"label_agreement":null},{"id":"W1657790903","doi":"10.4049/jimmunol.173.10.6234","title":"Identification and Partial Characterization of a Variant of Human CXCR3 Generated by Posttranscriptional Exon Skipping","year":2004,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":144,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Regional Cancer Foundation","funders":"National Cancer Institute; National Heart, Lung, and Blood Institute; National Institutes of Health; Deutsche Forschungsgemeinschaft","keywords":"Alternative splicing; RNA splicing; Biology; Exon; Transmembrane domain; Genetics; Chemokine receptor; Cell biology; RNA; Receptor; Gene; Chemokine","score_opus":0.01262193338570034,"score_gpt":0.2387327159403751,"score_spread":0.22611078255467476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1657790903","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972395,0.0004901646,0.0012983921,0.00008382866,0.000020052848,0.000014989227,0.00050305616,0.000015001583,0.00033502822],"genre_scores_gemma":[0.9946457,0.0003422389,0.0019241378,0.000102665756,0.000025218658,0.000013565475,0.002115248,0.0000125022025,0.00081867696],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993503,0.000009446822,0.000007689799,0.000015019212,0.000015354663,0.00001739163],"domain_scores_gemma":[0.99991333,0.000019654299,0.000022220238,0.000014997174,0.000009319313,0.000020565378],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011838394,0.00022603596,0.00012245779,0.00013329387,0.000117116295,0.00020896456,0.00013186394,0.00030241153,0.0006995072],"category_scores_gemma":[0.00017949613,0.00008046203,0.0002670593,0.00011032677,0.00017246758,0.00008731079,0.00010135121,0.00029760555,0.00044907953],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001799138,0.00002166563,0.0018039022,0.000019260293,0.000008596953,0.00069495174,0.00001979096,0.000060864022,0.994555,0.0001631699,0.00007344712,0.0023994592],"study_design_scores_gemma":[0.000108268694,0.0012507287,0.09886432,0.0000132343675,0.00010917739,0.030577144,0.000094168514,0.0031553335,0.85603184,0.00046047184,0.009306707,0.00002855825],"about_ca_topic_score_codex":0.0005267504,"about_ca_topic_score_gemma":0.0004193182,"teacher_disagreement_score":0.0006995072,"about_ca_system_score_codex":0.00015138453,"about_ca_system_score_gemma":0.00013999337,"threshold_uncertainty_score":0.002340138},"labels":[],"label_agreement":null},{"id":"W1669365448","doi":"10.1111/j.1469-8749.2010.03727.x","title":"Intracerebral large artery disease in Aicardi–Goutières syndrome implicates SAMHD1 in vascular homeostasis","year":2010,"lang":"en","type":"article","venue":"Developmental Medicine & Child Neurology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":110,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institutes of Health; National Institute for Health and Care Research; NIHR Biomedical Research Centre, Royal Marsden NHS Foundation Trust/Institute of Cancer Research","keywords":"Medicine; SAMHD1; Culprit; Vascular disease; Etiology; Pathology; Disease; Vascular occlusion; Stroke (engine); Internal medicine; Gene; Biology; Genetics","score_opus":0.0055177744656574245,"score_gpt":0.22054264934146584,"score_spread":0.2150248748758084,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1669365448","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978941,0.00054116215,0.0005599301,0.00008698491,0.0000051841366,0.0000060202337,0.000020562306,0.000019512145,0.00086650543],"genre_scores_gemma":[0.9990821,0.00016487729,0.00061162235,0.000037263027,0.000012935462,0.0000027720903,0.00001497742,0.000001928186,0.00007142622],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99984026,0.000041069918,0.000020888167,0.00003030305,0.000027198992,0.00004025666],"domain_scores_gemma":[0.9996118,0.00017144032,0.00011282504,0.000024532914,0.000024784487,0.00005464876],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003037879,0.00059255515,0.00022149683,0.00092157326,0.0003466744,0.00023806549,0.000216952,0.0005168277,0.0012037955],"category_scores_gemma":[0.00093395164,0.00014442888,0.00015412555,0.0004455566,0.00083745655,0.00021089632,0.00029785762,0.00030330865,0.00016413679],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048334486,0.00007533802,0.6050678,0.0001812834,0.00008304271,0.26191205,0.00075965445,0.00031278873,0.11078755,0.00054711814,0.00040523635,0.019384785],"study_design_scores_gemma":[0.000047265945,0.00040024112,0.41029724,0.000046433852,0.00011685677,0.56951344,0.00033495453,0.0006469299,0.01650922,0.0005406608,0.0015297853,0.000017003038],"about_ca_topic_score_codex":0.00079122686,"about_ca_topic_score_gemma":0.0010728755,"teacher_disagreement_score":0.0012037955,"about_ca_system_score_codex":0.00020861557,"about_ca_system_score_gemma":0.00015769919,"threshold_uncertainty_score":0.004027128},"labels":[],"label_agreement":null},{"id":"W1676185943","doi":"10.4049/jimmunol.164.10.5352","title":"Regulation of RANTES Chemokine Gene Expression Requires Cooperativity Between NF-κB and IFN-Regulatory Factor Transcription Factors","year":2000,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":218,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Terry Fox Research Institute","funders":"","keywords":"Transcription factor; Chemokine; Biology; NFKB1; Molecular biology; Interferon regulatory factors; Cell biology; Gene; Immune system; Immunology; Genetics","score_opus":0.017890983155377658,"score_gpt":0.2396960399644749,"score_spread":0.22180505680909723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1676185943","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9871011,0.0022426378,0.008311748,0.00008718165,0.000027350274,0.000034604796,0.00014256255,0.00008449936,0.0019682418],"genre_scores_gemma":[0.99456584,0.0005803259,0.0036328996,0.000020851225,0.0000101796795,0.000032657965,0.00014878914,0.000011076115,0.0009974537],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996068,0.000085711676,0.000028907132,0.000082400446,0.00010479954,0.000091426875],"domain_scores_gemma":[0.9998167,0.00004546135,0.000048793565,0.000029635183,0.00002753145,0.000031921332],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003489028,0.00034760486,0.00018534623,0.00016501037,0.00017288828,0.00035585192,0.00020942691,0.00013320937,0.0007104926],"category_scores_gemma":[0.00020316316,0.00019875381,0.0002775627,0.00008099359,0.00030185934,0.0002221546,0.00029320843,0.0003353848,0.00034808554],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006175532,0.000009825597,0.0002769548,0.000011329131,0.000002262063,0.000034200904,0.000010067568,0.00003168117,0.9988638,0.000109901724,0.0000077998575,0.00058043026],"study_design_scores_gemma":[0.000021225067,0.00013369074,0.012122311,0.0000120272325,0.000014160412,0.00038925154,0.000049068978,0.0027184687,0.98234665,0.0002389481,0.0019469131,0.000007273892],"about_ca_topic_score_codex":0.00042039625,"about_ca_topic_score_gemma":0.0007925349,"teacher_disagreement_score":0.0007104926,"about_ca_system_score_codex":0.0003029266,"about_ca_system_score_gemma":0.00026404997,"threshold_uncertainty_score":0.0023767948},"labels":[],"label_agreement":null},{"id":"W169793062","doi":"10.1016/j.cyto.2014.07.071","title":"64","year":2014,"lang":"en","type":"article","venue":"Cytokine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Computer science","score_opus":0.00802855861245205,"score_gpt":0.22341070877206243,"score_spread":0.21538215015961037,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W169793062","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008406431,0.0058844984,0.00457067,0.0027808226,0.0023075123,0.00010963682,0.00131983,0.0005014858,0.97411907],"genre_scores_gemma":[0.025172736,0.0033780467,0.0018020096,0.0007561668,0.0002917575,0.000052872158,0.0013221697,0.000091673355,0.96713245],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99979347,0.00002016869,0.0000089372215,0.000036061512,0.000100295605,0.00004107638],"domain_scores_gemma":[0.9998394,0.000020845704,0.000011679081,0.000034501096,0.00006457423,0.00002892914],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021606062,0.000658609,0.00021043977,0.0016004628,0.0007203069,0.0014725191,0.00043869665,0.0009040384,0.2438719],"category_scores_gemma":[0.0004982064,0.00022543891,0.00036298952,0.0008146228,0.00051799504,0.0004899928,0.00097180286,0.00088240084,0.15152124],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028600602,0.00028741005,0.0012184021,0.00040337467,0.00003909714,0.0007699925,0.0003646126,0.00064063864,0.1283912,0.10136545,0.3650368,0.40119696],"study_design_scores_gemma":[0.000011778719,0.000031136016,0.001195154,0.000087191554,0.000011098237,0.00042976576,0.000080268495,0.00014765692,0.013492206,0.00517988,0.9793251,0.0000088187335],"about_ca_topic_score_codex":0.002451396,"about_ca_topic_score_gemma":0.0019527067,"teacher_disagreement_score":0.7561281,"about_ca_system_score_codex":0.00088990957,"about_ca_system_score_gemma":0.0005862399,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W1785207020","doi":"10.4049/jimmunol.192.supp.45.11","title":"Memory B cells are critical in gamma herpes virus driven disease enhancement of a mouse model for MS (BA2P.124)","year":2014,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Downregulation and upregulation; Immunology; Experimental autoimmune encephalomyelitis; Immune system; Multiple sclerosis; Pathogenesis; Autoimmunity; Biology; Virus latency; Virus; Priming (agriculture); Virology; Bystander effect; Epstein–Barr virus; CD40; Cytotoxic T cell; Viral replication; Gene; Genetics","score_opus":0.015135534762107598,"score_gpt":0.2629828250619447,"score_spread":0.2478472902998371,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1785207020","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98274255,0.002749889,0.0050621293,0.00070759776,0.00025941318,0.00018465244,0.0017421086,0.0007479758,0.005803707],"genre_scores_gemma":[0.9692671,0.0013135114,0.0048750583,0.00027710796,0.00007708598,0.0005384223,0.0014689405,0.00019516064,0.021987682],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993506,0.00012735892,0.0000624717,0.00016921529,0.00014623205,0.00014418023],"domain_scores_gemma":[0.99929154,0.00007436407,0.00019146866,0.00008653673,0.00006890038,0.00028720548],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047945327,0.0014169572,0.0005344358,0.0017023869,0.00052176235,0.00071807666,0.00055289327,0.0016346144,0.004791966],"category_scores_gemma":[0.00024748192,0.00046452534,0.000539726,0.00033277363,0.0005645655,0.00065200543,0.0004426052,0.0033453752,0.0017763823],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008136368,0.00047646763,0.00024792153,0.00007786414,0.000012298062,0.00018998058,0.000047149275,0.00007041016,0.9956053,0.00043031742,0.0002049083,0.0018237032],"study_design_scores_gemma":[0.00036801683,0.0036644733,0.0066733654,0.0000955098,0.000089490626,0.0017400031,0.0001149683,0.0019004294,0.9728636,0.000608046,0.011857001,0.000025102969],"about_ca_topic_score_codex":0.0004232688,"about_ca_topic_score_gemma":0.00045290045,"teacher_disagreement_score":0.004791966,"about_ca_system_score_codex":0.00047496744,"about_ca_system_score_gemma":0.0002809391,"threshold_uncertainty_score":0.016030729},"labels":[],"label_agreement":null},{"id":"W1804146826","doi":"10.1002/ajmg.a.31322","title":"Frontometaphyseal dysplasia: Mutations in <i>FLNA</i> and phenotypic diversity","year":2006,"lang":"en","type":"article","venue":"American Journal of Medical Genetics Part A","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; McGill University; Montreal Children's Hospital","funders":"","keywords":"FLNA; Filamin; Missense mutation; Genetics; Biology; Phenotype; Proband; Dysplasia; Mutation; Gene","score_opus":0.009162403228442202,"score_gpt":0.2521854769628814,"score_spread":0.2430230737344392,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1804146826","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985898,0.00020438946,0.00017662845,0.000027565251,0.0000017012844,0.0000041743706,0.000086682056,0.000008455137,0.0009005964],"genre_scores_gemma":[0.99942696,0.00006891229,0.00017190218,0.000023219658,0.000005575838,0.0000028274276,0.00008363889,0.0000043179207,0.0002127171],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99974924,0.00003086481,0.000024072386,0.00008249089,0.000056098168,0.000057180823],"domain_scores_gemma":[0.9998115,0.00004920232,0.000057391935,0.000010628892,0.000019681707,0.00005158823],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017503265,0.00037362392,0.00032983406,0.0008166229,0.00039323393,0.00026223157,0.00014748647,0.00029264652,0.0016306023],"category_scores_gemma":[0.0006485722,0.00011978278,0.00015715789,0.00027413067,0.00037197364,0.0001614317,0.0003526033,0.00020570043,0.00019260655],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00068319245,0.00013091014,0.6211757,0.00010540074,0.00013623916,0.03574226,0.0017134662,0.00042538764,0.30208388,0.00054203335,0.0008304321,0.03643107],"study_design_scores_gemma":[0.000020032197,0.00017800234,0.84223783,0.00002317592,0.00005770376,0.14575195,0.00034603226,0.0003508338,0.008787813,0.00022791263,0.0020015948,0.00001706234],"about_ca_topic_score_codex":0.0009911413,"about_ca_topic_score_gemma":0.0014120102,"teacher_disagreement_score":0.0016306023,"about_ca_system_score_codex":0.00017144482,"about_ca_system_score_gemma":0.000101789374,"threshold_uncertainty_score":0.005454898},"labels":[],"label_agreement":null},{"id":"W1805810149","doi":"10.4049/jimmunol.175.4.2484","title":"Identification and Bioactivities of IFN-γ in Rainbow Trout <i>Oncorhynchus mykiss</i> : The First Th1-Type Cytokine Characterized Functionally in Fish","year":2005,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":383,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Rainbow trout; Biology; Trout; Molecular biology; Interferon; Complementary DNA; Immune system; Gene; Genetics","score_opus":0.00969445916082207,"score_gpt":0.2244972436129732,"score_spread":0.21480278445215115,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1805810149","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99892265,0.0002822618,0.00022348986,0.000020175969,0.0000035898722,0.0000067259284,0.0002581192,0.000009348052,0.00027364015],"genre_scores_gemma":[0.9963599,0.00030221263,0.00067567395,0.000054201522,0.0000071591157,0.000021261036,0.0011341084,0.000008112395,0.0014373717],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999454,0.0000028225131,0.000005162366,0.000017894652,0.000013134401,0.000015645875],"domain_scores_gemma":[0.9999422,0.000004762705,0.000022311551,0.0000040073887,0.000010926307,0.000015758524],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007556431,0.0001959256,0.00016210809,0.0002727375,0.00017970934,0.0001827954,0.00008263172,0.00017392001,0.00041241955],"category_scores_gemma":[0.00006426014,0.00011856685,0.00024285118,0.00013759767,0.00018767892,0.0001174266,0.00016712412,0.00022882367,0.00021439923],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008139542,0.000005514072,0.0031706821,0.000015636626,0.0000030650826,0.000029325387,0.00002981226,0.000013498976,0.99617034,0.000012052573,0.000011114623,0.00045749897],"study_design_scores_gemma":[0.000038410057,0.00073487614,0.55135906,0.000014307785,0.000085591906,0.0007391291,0.00034720634,0.00049301784,0.443439,0.00007659388,0.0026504695,0.000022367345],"about_ca_topic_score_codex":0.003221394,"about_ca_topic_score_gemma":0.00502589,"teacher_disagreement_score":0.003221394,"about_ca_system_score_codex":0.000352273,"about_ca_system_score_gemma":0.00029334152,"threshold_uncertainty_score":0.006405294},"labels":[],"label_agreement":null},{"id":"W1835983694","doi":"10.4141/cjas2011-074","title":"Sequence analysis of a putative goose RIG-I gene","year":2012,"lang":"en","type":"article","venue":"Canadian Journal of Animal Science","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Biology; Complementary DNA; Gene; Molecular biology; RNA Helicase A; RIG-I; Sequence analysis; Rapid amplification of cDNA ends; Genetics; RNA; Molecular cloning; Helicase","score_opus":0.03274522835996888,"score_gpt":0.2937314451041636,"score_spread":0.2609862167441947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1835983694","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.934567,0.0053027337,0.036150523,0.0006982457,0.00037259058,0.00047855632,0.014075498,0.00028770734,0.008067221],"genre_scores_gemma":[0.87837595,0.0032043236,0.039236333,0.0008878394,0.000116088224,0.00030118832,0.06501814,0.00013497571,0.012725199],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982834,0.000023639179,0.000019053105,0.00004930334,0.000043169475,0.00003652233],"domain_scores_gemma":[0.9997557,0.00006388752,0.000040482086,0.00002145876,0.00005402496,0.00006441243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013648733,0.0005567107,0.0004910883,0.0005926103,0.00030813442,0.00032866292,0.00036835377,0.0005429304,0.002561195],"category_scores_gemma":[0.00025013118,0.00020499398,0.0009985223,0.0005097543,0.00029809738,0.00018052117,0.00029469852,0.00065724103,0.002764279],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026966393,0.000046024597,0.0005591554,0.00013633582,0.000013793665,0.0006781303,0.00007081405,0.00013767609,0.99393904,0.00030886327,0.00016385781,0.0036766238],"study_design_scores_gemma":[0.00019376629,0.0017377074,0.069363035,0.00024955696,0.000293405,0.005616773,0.00044686915,0.006513083,0.84312016,0.00065499917,0.071655855,0.00015479159],"about_ca_topic_score_codex":0.001262327,"about_ca_topic_score_gemma":0.0013603392,"teacher_disagreement_score":0.002561195,"about_ca_system_score_codex":0.00038064434,"about_ca_system_score_gemma":0.00047286093,"threshold_uncertainty_score":0.008567989},"labels":[],"label_agreement":null},{"id":"W1841754242","doi":"10.1016/j.cyto.2015.08.090","title":"ID: 60","year":2015,"lang":"en","type":"article","venue":"Cytokine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Biology; Cell biology; Virus; Nucleic acid; Viral envelope; Interferon; Innate immune system; IRF3; Signal transduction; Virology; Genetics; Immune system","score_opus":0.03050275084134482,"score_gpt":0.26469806158739506,"score_spread":0.23419531074605024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1841754242","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005497168,0.0006093681,0.00025365374,0.0014532898,0.002108111,0.00012500255,0.0045984886,0.0010299089,0.9892725],"genre_scores_gemma":[0.0015631629,0.00038784684,0.000097057324,0.0004920132,0.0004109164,0.00003585153,0.0012717324,0.00023838229,0.995503],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993759,0.000050025974,0.000034620236,0.00014300674,0.0002531353,0.00014328056],"domain_scores_gemma":[0.99873346,0.00016569775,0.000048424165,0.00012609242,0.00032479505,0.0006014568],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004913878,0.0018565172,0.002045799,0.0050589493,0.0028024872,0.0073245014,0.0016948639,0.003314484,0.94237876],"category_scores_gemma":[0.003015616,0.0008176986,0.0011644918,0.0026170523,0.0012029805,0.001884667,0.0039977026,0.0021673425,0.9348097],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015806964,0.00014800421,0.00034363018,0.00059200556,0.000016492108,0.00013176592,0.00010633274,0.0001085119,0.0018584852,0.006364912,0.9163521,0.07381969],"study_design_scores_gemma":[0.000031786876,0.00005800572,0.0009807833,0.00037784444,0.000015127627,0.00013086073,0.00008042122,0.00009710629,0.0006112983,0.0025383225,0.9950663,0.000012083869],"about_ca_topic_score_codex":0.003362508,"about_ca_topic_score_gemma":0.004345789,"teacher_disagreement_score":0.05762124,"about_ca_system_score_codex":0.0018048201,"about_ca_system_score_gemma":0.0019006423,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W1897454326","doi":"10.4049/jimmunol.1300774","title":"The Human Immune System Recognizes Neopeptides Derived from Mitochondrial DNA Deletions","year":2014,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; York University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Immune system; Mitochondrial DNA; CD8; Major histocompatibility complex; Human leukocyte antigen; Homology (biology); Mitochondrion; Cytotoxic T cell; Genetics; Amino acid; Gene; Molecular biology; Antigen; In vitro","score_opus":0.010548449948834247,"score_gpt":0.2295444917187839,"score_spread":0.21899604176994966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1897454326","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97622013,0.0027823143,0.017971374,0.00025864257,0.000040602175,0.00006136998,0.00028761904,0.00016765537,0.0022101586],"genre_scores_gemma":[0.9841484,0.0011226754,0.013072004,0.00020473966,0.000032042793,0.000028788438,0.00056659634,0.000013462393,0.000811259],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998572,0.000032201606,0.000010127669,0.000042289517,0.000036977814,0.000021215586],"domain_scores_gemma":[0.9998281,0.00008204947,0.000035155783,0.0000146511,0.000019928742,0.000020093286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014908066,0.00037408652,0.00023930735,0.00020159034,0.00011848118,0.00031308975,0.00015242466,0.00049202406,0.0014114785],"category_scores_gemma":[0.0003542543,0.00011258396,0.00023094052,0.00010120094,0.00014586271,0.00016771814,0.00025148128,0.00045344993,0.00075777515],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014618914,0.00005122109,0.007948659,0.000094995274,0.000020265317,0.0001806528,0.000030395804,0.0008787278,0.9666367,0.00011043063,0.00014976543,0.023751868],"study_design_scores_gemma":[0.00009420992,0.0030777357,0.0805759,0.000077804136,0.000113293565,0.0052981717,0.0002619269,0.027094318,0.8641489,0.0016541809,0.017565593,0.000037839523],"about_ca_topic_score_codex":0.00011665352,"about_ca_topic_score_gemma":0.0001420254,"teacher_disagreement_score":0.0014114785,"about_ca_system_score_codex":0.000079697405,"about_ca_system_score_gemma":0.00009960837,"threshold_uncertainty_score":0.0047218204},"labels":[],"label_agreement":null},{"id":"W1901382022","doi":"10.4049/jimmunol.0803093","title":"Actin and RIG-I/MAVS Signaling Components Translocate to Mitochondria upon Influenza A Virus Infection of Human Primary Macrophages","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":97,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Biology; Cell biology; Actin; Proteome; Cytochalasin D; Cytosol; Actin cytoskeleton; Mitochondrion; Cytoskeleton; Cell; Biochemistry","score_opus":0.01930375835981388,"score_gpt":0.27597909655084146,"score_spread":0.25667533819102756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1901382022","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99479055,0.0021212471,0.0014358114,0.000092935,0.00002692344,0.000022238046,0.00044716155,0.000022959675,0.0010402189],"genre_scores_gemma":[0.9927799,0.0013128491,0.0019172616,0.00009190699,0.000021630465,0.000071685245,0.0008290631,0.000013629707,0.0029620647],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998963,0.0000132196465,0.000007374849,0.000024841669,0.000023231889,0.00003498476],"domain_scores_gemma":[0.99995303,0.00000491805,0.000010158135,0.0000054814554,0.000014218153,0.000012267186],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000110927205,0.00021680043,0.00019513196,0.00018262293,0.00014854867,0.00019003768,0.00008243566,0.00018761451,0.00077482633],"category_scores_gemma":[0.00005468077,0.0001454996,0.00025275504,0.00012283647,0.00012084631,0.00018560055,0.00016604338,0.0002958423,0.0004982962],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013863505,0.000007714792,0.00027296398,0.000020759699,0.000003312653,0.00005561717,0.00001973334,0.000010772373,0.9990701,0.00002205534,0.000017606904,0.00036082158],"study_design_scores_gemma":[0.00003824602,0.0004135387,0.039422646,0.000016488093,0.000036340578,0.0006613184,0.00017610007,0.0009074161,0.9552125,0.000091506,0.0030139254,0.000010012882],"about_ca_topic_score_codex":0.00033888864,"about_ca_topic_score_gemma":0.00044463482,"teacher_disagreement_score":0.00077482633,"about_ca_system_score_codex":0.00015486582,"about_ca_system_score_gemma":0.00014044328,"threshold_uncertainty_score":0.0025920868},"labels":[],"label_agreement":null},{"id":"W190626844","doi":"10.1074/jbc.m704870200","title":"Regulation of IRF-3-dependent Innate Immunity by the Papain-like Protease Domain of the Severe Acute Respiratory Syndrome Coronavirus","year":2007,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":420,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital","funders":"National Institute of Allergy and Infectious Diseases; National Institute on Drug Abuse","keywords":"Innate immune system; Coronavirus; Immunity; Respiratory system; Protease; Medicine; Virology; Papain; Coronavirus disease 2019 (COVID-19); Immunology; Biology; Immune system; Internal medicine; Enzyme","score_opus":0.020990344904858915,"score_gpt":0.2631936868569988,"score_spread":0.24220334195213988,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W190626844","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939896,0.0019494365,0.002657916,0.0001740675,0.000031016756,0.000021727636,0.00021639511,0.00004134245,0.00091856386],"genre_scores_gemma":[0.9965702,0.0006715099,0.0019128507,0.000062864216,0.00001204215,0.000022140373,0.00023912948,0.000004501548,0.0005048221],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998661,0.000040554332,0.000011119319,0.000020531408,0.000026072366,0.000035618894],"domain_scores_gemma":[0.99993944,0.000016828335,0.000015835254,0.00000972492,0.000007641838,0.000010509923],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020677864,0.0003330739,0.00017954355,0.000112020585,0.00013083042,0.00016153071,0.00014301242,0.00021591586,0.00074206153],"category_scores_gemma":[0.0001267687,0.000093528026,0.0004276333,0.00006088082,0.0002443616,0.00016506607,0.00018438997,0.0004945653,0.00025604793],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012737235,0.000024125506,0.00030430662,0.00003698399,0.0000035699675,0.000063078725,0.000009794242,0.00006184534,0.99827385,0.00007966503,0.000021648952,0.0009938229],"study_design_scores_gemma":[0.000040214985,0.0003826958,0.009681203,0.00000824459,0.000016692533,0.0006570579,0.000041583095,0.001994432,0.9853403,0.00017747762,0.0016539366,0.000006133717],"about_ca_topic_score_codex":0.00018817329,"about_ca_topic_score_gemma":0.00019404897,"teacher_disagreement_score":0.00074206153,"about_ca_system_score_codex":0.0001706629,"about_ca_system_score_gemma":0.00020724702,"threshold_uncertainty_score":0.0024824142},"labels":[],"label_agreement":null},{"id":"W1923531181","doi":"10.1128/jvi.02247-15","title":"Oligomerization Requirements for MX2-Mediated Suppression of HIV-1 Infection","year":2015,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Medical Research Council; European Commission; National Institute for Health and Care Research; King's College London; King's College Hospital NHS Foundation Trust; Wellcome Trust","keywords":"Biology; Antiviral protein; Virology; Nucleoprotein; Capsid; Virus; Viral replication; Viral protein; Interferon; Immunoprecipitation; RNA; Cell biology; Gene; Genetics","score_opus":0.03618388132763998,"score_gpt":0.3040528923201813,"score_spread":0.2678690109925413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1923531181","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966577,0.0009996904,0.0010310345,0.000053898246,0.000008458631,0.000014818061,0.00015442247,0.00003496209,0.001044909],"genre_scores_gemma":[0.99758446,0.0002629879,0.0010614882,0.00003986383,0.000005884145,0.000022666554,0.00055540446,0.000013154449,0.00045419767],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998511,0.000029902958,0.000015697815,0.000040171424,0.000037654336,0.000025425212],"domain_scores_gemma":[0.9998894,0.000023417042,0.00003755038,0.000009749134,0.0000149066545,0.000024952093],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001859206,0.0003354048,0.00015315514,0.00010922867,0.00022294672,0.00045812767,0.00017438729,0.00026154492,0.0017370665],"category_scores_gemma":[0.00013729074,0.000135489,0.00017066224,0.00008505612,0.0002187118,0.00027530562,0.00021109509,0.0004424664,0.00039947766],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007998234,0.000031418163,0.00028294662,0.000024804915,0.0000032417042,0.000024069232,0.000016026152,0.00010221783,0.9990551,0.000101509846,0.000026418498,0.00025232942],"study_design_scores_gemma":[0.000016302596,0.0001643531,0.008065935,0.00001105431,0.000011498358,0.00032211104,0.000047095135,0.0022644612,0.98663193,0.00008891994,0.0023700083,0.0000062424215],"about_ca_topic_score_codex":0.0002889159,"about_ca_topic_score_gemma":0.00042083772,"teacher_disagreement_score":0.0017370665,"about_ca_system_score_codex":0.00047239623,"about_ca_system_score_gemma":0.00016289057,"threshold_uncertainty_score":0.0058110356},"labels":[],"label_agreement":null},{"id":"W1936337345","doi":"10.1080/21505594.2015.1062211","title":"A tug-of-war between the host and the pathogen generates strategic hotspots for the development of novel therapeutic interventions against infectious diseases","year":2015,"lang":"en","type":"review","venue":"Virulence","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Biology; Pathogen; Host (biology); Pattern recognition receptor; Host–pathogen interaction; Tug of war; Computational biology; Pathogen-associated molecular pattern; Immunology; Immunity; Immune system; Virulence; Gene; Genetics","score_opus":0.133123151650341,"score_gpt":0.35839203802923475,"score_spread":0.22526888637889375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1936337345","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000121075136,0.9968246,0.00027995557,0.0006261854,0.00062199624,0.000003634955,0.00001815269,0.000012858615,0.0014914122],"genre_scores_gemma":[0.00087271153,0.9966343,0.00034263497,0.00034063146,0.00048441684,0.0000056523018,0.000032942793,0.000003157004,0.0012834477],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99985063,0.000025031493,0.0000186189,0.000027977694,0.000057120888,0.000020652806],"domain_scores_gemma":[0.99969864,0.00012622232,0.0000396487,0.000012515581,0.00007799215,0.00004506325],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051946106,0.00074126926,0.0009871235,0.0016703908,0.00031516847,0.0010683027,0.0007768598,0.0013485709,0.0044578584],"category_scores_gemma":[0.0006200883,0.00021571564,0.00031611216,0.0014478863,0.00052611815,0.0017448798,0.0007964787,0.0021066081,0.0027733964],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006431676,0.000054665627,0.00015366002,0.009656089,0.000049121776,0.00018858229,0.00006219193,0.00035227847,0.003751235,0.009876178,0.050846424,0.9249453],"study_design_scores_gemma":[0.000004153801,0.00003665904,0.00033872318,0.001487181,0.000024982513,0.00065111706,0.000043811568,0.00004715768,0.00038379527,0.002277055,0.994696,0.0000093370645],"about_ca_topic_score_codex":0.00041320955,"about_ca_topic_score_gemma":0.00088494574,"teacher_disagreement_score":0.0044578584,"about_ca_system_score_codex":0.000727193,"about_ca_system_score_gemma":0.0009698065,"threshold_uncertainty_score":0.0149130225},"labels":[],"label_agreement":null},{"id":"W1936789375","doi":"10.4049/jimmunol.1000890","title":"<i>N</i>-Ethyl-<i>N</i>-Nitrosourea–Induced Mutation in Ubiquitin-Specific Peptidase 18 Causes Hyperactivation of IFN-αβ Signaling and Suppresses STAT4-Induced IFN-γ Production, Resulting in Increased Susceptibility to <i>Salmonella</i> Typhimurium","year":2010,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill Genome Centre; McGill University Health Centre","funders":"McGill University Health Centre; Canadian Institutes of Health Research; National Cancer Institute; National Institutes of Health; Canada Research Chairs; National Heart, Lung, and Blood Institute; McGill University","keywords":"Biology; STAT4; Missense mutation; Mutation; Gene; Phosphorylation; Ubiquitin; STAT1; Salmonella; Cytokine; Cancer research; Interferon; Molecular biology; Microbiology; Genetics; stat; Bacteria; STAT3","score_opus":0.021599857134210258,"score_gpt":0.26749136643843807,"score_spread":0.24589150930422782,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1936789375","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99791497,0.00015835985,0.0010108543,0.000051951956,0.000015097557,0.000012904281,0.00013011688,0.000047834288,0.0006580079],"genre_scores_gemma":[0.99692386,0.00021489874,0.0012921819,0.000040124884,0.000006620294,0.0000125499255,0.0002574146,0.000020248748,0.001231996],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998958,0.000020758713,0.000011165833,0.000022711922,0.000022110753,0.00002751069],"domain_scores_gemma":[0.9998851,0.000017763758,0.000051724455,0.000018480388,0.000006675801,0.000020284002],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000107190805,0.000325859,0.00013949795,0.00019377441,0.00008762633,0.00013821665,0.00015556156,0.00020113126,0.001066827],"category_scores_gemma":[0.00007772392,0.00015438604,0.00020557927,0.00008136244,0.00023077149,0.00007352744,0.00011214489,0.00032316896,0.00022489147],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001170509,0.000022371256,0.00013409946,0.000008682269,0.000004831742,0.000036906487,0.000003246744,0.00005145176,0.99916077,0.00005207245,0.000018066452,0.00039036915],"study_design_scores_gemma":[0.000024703197,0.00036570898,0.002609877,0.0000039904203,0.000014372329,0.00030514837,0.000010401163,0.000550824,0.9952201,0.000035723824,0.0008558392,0.0000032644484],"about_ca_topic_score_codex":0.0006471857,"about_ca_topic_score_gemma":0.0011154223,"teacher_disagreement_score":0.001066827,"about_ca_system_score_codex":0.00021813659,"about_ca_system_score_gemma":0.00016060508,"threshold_uncertainty_score":0.0035688877},"labels":[],"label_agreement":null},{"id":"W1963659133","doi":"10.1016/j.dci.2014.09.006","title":"Functional characterization of receptor-interacting serine/threonine kinase 2 (RIP2) of the goldfish (Carassius auratus L.)","year":2014,"lang":"en","type":"article","venue":"Developmental & Comparative Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"China Scholarship Council; University of Alberta; Alberta Innovates - Technology Futures","keywords":"Biology; NOD1; Molecular biology; Messenger RNA; Serine; Recombinant DNA; Cell biology; Innate immune system; Receptor; Phosphorylation; NOD2; Biochemistry; Gene","score_opus":0.020389454599553495,"score_gpt":0.2382960727962165,"score_spread":0.21790661819666302,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1963659133","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99408025,0.001978406,0.0010042505,0.00015166718,0.000034756464,0.000021465015,0.0011544861,0.000024666833,0.0015500272],"genre_scores_gemma":[0.9867769,0.000990696,0.0018425414,0.00017668857,0.000029965826,0.000040207688,0.0053449697,0.000027008018,0.004771033],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992394,0.00000623608,0.00000865931,0.000024695806,0.00001692238,0.000019437162],"domain_scores_gemma":[0.9998772,0.000015675665,0.000027882656,0.000016913087,0.000028177312,0.00003413102],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015858706,0.0003575682,0.00022637543,0.00035689273,0.00024024579,0.00038398447,0.00025008112,0.00034520696,0.0013112588],"category_scores_gemma":[0.00020008652,0.00016155397,0.0003412731,0.00016297787,0.0002552874,0.00031926384,0.00022979378,0.00045375584,0.00076094974],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014647112,0.000018420162,0.0014491276,0.000063581116,0.000009561588,0.00016003128,0.000028150629,0.000059292608,0.9968918,0.00009927229,0.00007730759,0.0009970617],"study_design_scores_gemma":[0.00016074789,0.00079054915,0.22029305,0.00003867464,0.00019132915,0.005390262,0.0005932394,0.0031153352,0.74937165,0.00046776532,0.019532796,0.000054604985],"about_ca_topic_score_codex":0.0011322852,"about_ca_topic_score_gemma":0.0014210546,"teacher_disagreement_score":0.0013112588,"about_ca_system_score_codex":0.0003149393,"about_ca_system_score_gemma":0.00030774542,"threshold_uncertainty_score":0.0043866634},"labels":[],"label_agreement":null},{"id":"W1963982200","doi":"10.1371/journal.pone.0052738","title":"Anti-HIV-1 Activity of Elafin Depends on Its Nuclear Localization and Altered Innate Immune Activation in Female Genital Epithelial Cells","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; University of Manitoba; McMaster University Medical Centre","funders":"Ontario HIV Treatment Network; Bill and Melinda Gates Foundation","keywords":"Elafin; Innate immune system; TLR3; Biology; Transcytosis; Paracrine signalling; Cell biology; Immune system; Immunology; Cell; Toll-like receptor; Biochemistry; Endocytosis; Receptor","score_opus":0.03513653355385628,"score_gpt":0.23503692748376073,"score_spread":0.19990039392990444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1963982200","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99700195,0.0013571506,0.0009482302,0.00003990177,0.000008128956,0.000007031149,0.0001439962,0.000015320138,0.0004782554],"genre_scores_gemma":[0.9973138,0.0005070387,0.0007957304,0.000038527898,0.000004692616,0.000011795694,0.00024953997,0.0000044827375,0.0010744457],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998921,0.000016481774,0.000009107762,0.00002633514,0.000023542862,0.000032396852],"domain_scores_gemma":[0.99994755,0.00001175942,0.000012266019,0.000008674442,0.000008272657,0.000011463266],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009733522,0.00016954343,0.00014731541,0.00011776503,0.00011652134,0.00026207487,0.000110076566,0.00016957884,0.0008113849],"category_scores_gemma":[0.00007945548,0.00007374455,0.00018837507,0.00011522318,0.00015103286,0.00018626572,0.000106991574,0.000286818,0.00015464949],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057879126,0.000013107836,0.00013073973,0.000014644899,0.0000017562978,0.00003134215,0.000007175422,0.00001339914,0.99913234,0.000023962024,0.000005027304,0.000568676],"study_design_scores_gemma":[0.000008590848,0.00020766786,0.010930322,0.0000038257576,0.000008452578,0.0004588423,0.000046229663,0.00043896696,0.986725,0.000024148329,0.0011448065,0.0000032227538],"about_ca_topic_score_codex":0.0003146671,"about_ca_topic_score_gemma":0.00031634944,"teacher_disagreement_score":0.0008113849,"about_ca_system_score_codex":0.00017070911,"about_ca_system_score_gemma":0.000106459214,"threshold_uncertainty_score":0.0027143955},"labels":[],"label_agreement":null},{"id":"W1965492236","doi":"10.1074/jbc.c109.073627","title":"Sequestosome-1/p62 Is the Key Intracellular Target of Innate Defense Regulator Peptide","year":2009,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":83,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Centre for Disease Control; Inimex Pharmaceuticals (Canada); University of British Columbia; Canada's Michael Smith Genome Sciences Centre","funders":"Canadian Institutes of Health Research; Howard Hughes Medical Institute","keywords":"Sequestosome 1; Regulator; Intracellular; Cell biology; Key (lock); Innate immune system; Peptide; Chemistry; Biology; Biochemistry; Autophagy; Ecology; Apoptosis; Receptor","score_opus":0.015472274959147764,"score_gpt":0.23593632677314044,"score_spread":0.22046405181399267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1965492236","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9611325,0.018979678,0.014794789,0.0005053594,0.00013144566,0.00006387062,0.0004374207,0.00031723222,0.003637793],"genre_scores_gemma":[0.98223346,0.004523205,0.0077750115,0.00012780949,0.00006006116,0.000044448923,0.00090470526,0.00003422932,0.0042970055],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998938,0.000016551785,0.0000067850897,0.000035562116,0.000031379263,0.000015949046],"domain_scores_gemma":[0.99994385,0.000007906869,0.000020136626,0.0000050955723,0.000007661925,0.00001532165],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011651578,0.00040932914,0.00032576424,0.0001751759,0.00023879725,0.0002646319,0.00017223373,0.00030145844,0.0011108577],"category_scores_gemma":[0.00012499951,0.00009250278,0.00017129414,0.00011663472,0.00019886393,0.00025480153,0.000236721,0.00044350032,0.00072326226],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000106629726,0.00001367697,0.00019456097,0.00007957217,0.0000038587273,0.00012541522,0.0000099505205,0.00004570003,0.995685,0.00017430971,0.000071242175,0.0034901162],"study_design_scores_gemma":[0.000031310577,0.00035067336,0.0053509073,0.000011970786,0.000016722366,0.0013423865,0.00003023574,0.0013330696,0.98355687,0.00034947414,0.007618225,0.000008075296],"about_ca_topic_score_codex":0.00012372211,"about_ca_topic_score_gemma":0.00017687715,"teacher_disagreement_score":0.0011108577,"about_ca_system_score_codex":0.00021840965,"about_ca_system_score_gemma":0.00015287602,"threshold_uncertainty_score":0.0037161708},"labels":[],"label_agreement":null},{"id":"W1966847301","doi":"10.1016/j.virol.2007.03.011","title":"Bax-dependent mitochondrial membrane permeabilization enhances IRF3-mediated innate immune response during VSV infection","year":2007,"lang":"en","type":"article","venue":"Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; McGill University; Jewish General Hospital","funders":"Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Biology; IRF3; Vesicular stomatitis virus; Innate immune system; Apoptosis; Interferon; Cell biology; Oncolytic virus; Programmed cell death; Virology; Immune system; Virus; Immunology","score_opus":0.00674491858013666,"score_gpt":0.240860374654708,"score_spread":0.23411545607457135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1966847301","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945458,0.001729934,0.0017607673,0.00033277366,0.0001160443,0.000030333113,0.00030206775,0.000074248725,0.0011081042],"genre_scores_gemma":[0.9982212,0.00026986355,0.0004282602,0.00006032373,0.000024741634,0.000026588717,0.00028395533,0.00000937693,0.0006756244],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993844,0.00016478176,0.000042127984,0.000064188636,0.00009105261,0.00025346145],"domain_scores_gemma":[0.9996911,0.000096592594,0.000055823217,0.000057813213,0.000038041526,0.00006072969],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045306928,0.0004032608,0.00050096965,0.0002849069,0.0005310858,0.0005200442,0.00025452644,0.0006732839,0.002943829],"category_scores_gemma":[0.0004574594,0.00024976538,0.0005750739,0.00019252686,0.00047849907,0.0008244955,0.00045945702,0.0017464345,0.00067071733],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001505356,0.00006699787,0.00039320992,0.0000981482,0.000012151737,0.00013250532,0.000042736847,0.000083857376,0.99616086,0.00025866498,0.0001592041,0.0010862473],"study_design_scores_gemma":[0.000077816534,0.00033627343,0.017760716,0.000020472728,0.000023750998,0.00066139543,0.00020294866,0.0015873612,0.9774169,0.0003888746,0.0015118009,0.000011661838],"about_ca_topic_score_codex":0.00025846536,"about_ca_topic_score_gemma":0.00032126743,"teacher_disagreement_score":0.002943829,"about_ca_system_score_codex":0.000742614,"about_ca_system_score_gemma":0.00022410888,"threshold_uncertainty_score":0.009848118},"labels":[],"label_agreement":null},{"id":"W1968027480","doi":"10.1074/jbc.m110.164632","title":"TBK1-associated Protein in Endolysosomes (TAPE) Is an Innate Immune Regulator Modulating the TLR3 and TLR4 Signaling Pathways","year":2010,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; National Science Council; McGill University","keywords":"TRIF; TLR3; Innate immune system; Gene knockdown; Cell biology; Biology; TANK-binding kinase 1; Signal transduction; TLR4; Immunology; Immune system; Toll-like receptor; MAPK/ERK pathway; Cell culture; MAP kinase kinase kinase","score_opus":0.020701964508119314,"score_gpt":0.2354606723151046,"score_spread":0.21475870780698528,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968027480","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.974896,0.012855243,0.009464138,0.00025236592,0.00009734883,0.000037399084,0.001018839,0.00021421225,0.0011643426],"genre_scores_gemma":[0.9897167,0.0027311435,0.0039142743,0.00012870856,0.000023000222,0.0000257411,0.0013927437,0.000034156812,0.002033564],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986136,0.000013334877,0.000016532967,0.000048531587,0.000028487182,0.00003171429],"domain_scores_gemma":[0.99981946,0.0000102773065,0.000098995275,0.000012472243,0.00002457562,0.00003425701],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013556356,0.0003567444,0.0003341234,0.0002557054,0.00031758688,0.0004437499,0.00019388177,0.00036034195,0.00072517054],"category_scores_gemma":[0.0001321023,0.00012181119,0.00052783475,0.00020488535,0.00026075437,0.00038642832,0.0005008586,0.0004703095,0.00054684276],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000098607576,0.0000059530107,0.0007907572,0.00009109175,0.000009584395,0.00017441685,0.000018705785,0.000042347012,0.99703085,0.000111161484,0.00006902194,0.0015574036],"study_design_scores_gemma":[0.000013432673,0.00014764919,0.017072093,0.00002792937,0.000046150053,0.0033121356,0.00007466116,0.0009631522,0.96990144,0.00011242888,0.008312748,0.000016200102],"about_ca_topic_score_codex":0.00028906824,"about_ca_topic_score_gemma":0.0002611577,"teacher_disagreement_score":0.00072517054,"about_ca_system_score_codex":0.000517415,"about_ca_system_score_gemma":0.00021896865,"threshold_uncertainty_score":0.003754139},"labels":[],"label_agreement":null},{"id":"W1968172070","doi":"10.1016/j.it.2012.06.004","title":"Modulation of immune signalling by inhibitors of apoptosis","year":2012,"lang":"en","type":"review","venue":"Trends in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":146,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Ontario Institute for Cancer Research; Children's Hospital of Eastern Ontario","funders":"Canadian Institutes of Health Research","keywords":"XIAP; Inhibitor of apoptosis; Biology; Cell biology; Innate immune system; Signal transduction; Ubiquitin ligase; MAPK/ERK pathway; Acquired immune system; Immunology; Programmed cell death; Immune system; Ubiquitin; Apoptosis; Caspase; Genetics; Gene","score_opus":0.03934405393272245,"score_gpt":0.30961096427127277,"score_spread":0.2702669103385503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968172070","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00025621604,0.9961515,0.00043017918,0.0003639085,0.00066366466,0.000008654576,0.000032212185,0.000025872656,0.0020678209],"genre_scores_gemma":[0.001809675,0.9952005,0.00032552786,0.00035258525,0.0004816944,0.000017243052,0.0000752984,0.000004307857,0.0017331666],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99981743,0.000020879344,0.000027917013,0.000036014742,0.0000721819,0.000025577272],"domain_scores_gemma":[0.99975866,0.00008098553,0.000050209153,0.000011699094,0.00006533207,0.00003321805],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058370753,0.0013156985,0.0014403961,0.0011464554,0.00023639579,0.00102881,0.0010772655,0.0010039002,0.0029195258],"category_scores_gemma":[0.00057042687,0.00034006944,0.0003696388,0.0011992177,0.0006887652,0.001289354,0.0006531541,0.0027767732,0.0031372297],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025402312,0.00010346505,0.00012440175,0.006673094,0.00006540836,0.00016120597,0.000026762813,0.00044389608,0.0059968536,0.003715603,0.035186,0.94724935],"study_design_scores_gemma":[0.00007493492,0.00013931589,0.0006844203,0.00094587874,0.00008999251,0.0006289596,0.000024196292,0.00014580046,0.0021144259,0.0018236706,0.9933062,0.000022302404],"about_ca_topic_score_codex":0.00046159333,"about_ca_topic_score_gemma":0.00095096783,"teacher_disagreement_score":0.0029195258,"about_ca_system_score_codex":0.00066732656,"about_ca_system_score_gemma":0.00068231433,"threshold_uncertainty_score":0.0097667575},"labels":[],"label_agreement":null},{"id":"W1968305726","doi":"10.1136/heart.85.2.152","title":"Echocardiographic diagnosis of Bland-White-Garland syndrome","year":2001,"lang":"en","type":"article","venue":"Heart","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Body mass index; Adipokine; Internal medicine; Osteoarthritis; Physical therapy; Obesity; Leptin; Pathology","score_opus":0.01153794159178459,"score_gpt":0.2368134024917216,"score_spread":0.225275460899937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968305726","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98198456,0.0028583917,0.003884083,0.0016094086,0.00015322976,0.00007428952,0.00045714728,0.00007923479,0.008899619],"genre_scores_gemma":[0.9978271,0.0004279325,0.00085132424,0.00023974662,0.000093723305,0.000008837824,0.00014705594,0.0000046655146,0.00039959844],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.9998759,0.000023402972,0.000016224036,0.00003499646,0.00002643279,0.000022962033],"domain_scores_gemma":[0.999534,0.0002169302,0.00009968455,0.000023290011,0.00003000747,0.00009607675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024236337,0.0004784338,0.00029418734,0.0007655767,0.00023639892,0.00019369146,0.00029324365,0.00060003146,0.0031655005],"category_scores_gemma":[0.0015636605,0.00012251244,0.00019884952,0.00025909004,0.000373571,0.0003818845,0.00023314895,0.00063879346,0.00024699705],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004393435,0.00015331275,0.6491864,0.00012976998,0.000089537825,0.31085894,0.0004202076,0.00037433693,0.021268867,0.0011463398,0.0020792382,0.0138537],"study_design_scores_gemma":[0.000054274613,0.0003101447,0.529795,0.00017059667,0.0000661902,0.46101674,0.00044544946,0.0022874156,0.0025459444,0.0010272864,0.0022476937,0.00003328944],"about_ca_topic_score_codex":0.0012757508,"about_ca_topic_score_gemma":0.0013415305,"teacher_disagreement_score":0.0031655005,"about_ca_system_score_codex":0.00014645112,"about_ca_system_score_gemma":0.0002518712,"threshold_uncertainty_score":0.010589719},"labels":[],"label_agreement":null},{"id":"W1969119726","doi":"10.1016/j.molcel.2013.12.025","title":"Dimeric Structure of Pseudokinase RNase L Bound to 2-5A Reveals a Basis for Interferon-Induced Antiviral Activity","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":148,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University; Lunenfeld-Tanenbaum Research Institute; McMaster University; University of Toronto; Mount Sinai Hospital","funders":"National Institute of Allergy and Infectious Diseases; National Cancer Institute; Canadian Institutes of Health Research; Centers for Disease Control and Prevention; National Institute of General Medical Sciences; Wellcome Trust","keywords":"Biology; Interferon; RNase P; Cell biology; Virology; Genetics; RNA; Gene","score_opus":0.008571037002968043,"score_gpt":0.24451676509652512,"score_spread":0.23594572809355707,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969119726","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9903258,0.0010862703,0.006026171,0.00030154054,0.00004880324,0.000019405496,0.00010796259,0.0000942983,0.0019896836],"genre_scores_gemma":[0.99735767,0.00010002217,0.0013432096,0.00009094858,0.000009581541,0.000006824969,0.00021016362,0.000009634191,0.00087188906],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998872,0.000028307551,0.0000060605016,0.000034094017,0.00001824895,0.000026066602],"domain_scores_gemma":[0.99985313,0.000029400248,0.00003584829,0.00002037191,0.000012471806,0.000048620826],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014365547,0.0002767586,0.0003247698,0.00016482559,0.00045018856,0.0005611056,0.0004586669,0.00044176052,0.0020077426],"category_scores_gemma":[0.00021898473,0.00019470933,0.00033889333,0.00012433948,0.00034773612,0.00033981426,0.00016531385,0.00074188435,0.0006763319],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040089551,0.000076802695,0.00074372854,0.00003743093,0.00001841016,0.00032129406,0.00007836397,0.0005967,0.9942783,0.0019814714,0.000184654,0.0012819844],"study_design_scores_gemma":[0.00009031144,0.00038435895,0.007822188,0.000013618899,0.000026659425,0.0009007082,0.00020408984,0.018483492,0.9664992,0.0017405107,0.0037976876,0.000037167378],"about_ca_topic_score_codex":0.00037096013,"about_ca_topic_score_gemma":0.00033224394,"teacher_disagreement_score":0.0020077426,"about_ca_system_score_codex":0.00058885006,"about_ca_system_score_gemma":0.0003040594,"threshold_uncertainty_score":0.006716609},"labels":[],"label_agreement":null},{"id":"W1969413362","doi":"10.1007/s10858-007-9198-y","title":"The NMR structure of the TRADD death domain, a key protein in the TNF signaling pathway","year":2007,"lang":"en","type":"article","venue":"Journal of Biomolecular NMR","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's Health Research Institute","funders":"","keywords":"TRADD; Chemistry; Death domain; Key (lock); Signal transduction; Cell biology; Domain (mathematical analysis); Tumor necrosis factor alpha; Computational biology; Biochemistry; Apoptosis; Programmed cell death; Immunology; Biology","score_opus":0.007977645416879956,"score_gpt":0.23608780467224288,"score_spread":0.22811015925536293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969413362","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99081683,0.0015217789,0.0027354974,0.001207177,0.00007282645,0.000010266018,0.0006417507,0.00007704031,0.0029168779],"genre_scores_gemma":[0.99505085,0.0005446428,0.0018034414,0.00014116002,0.000028526301,0.0000049593173,0.0010414852,0.000010892393,0.0013741045],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999591,0.0000070313804,0.0000021134292,0.00000776782,0.000010909157,0.000012946804],"domain_scores_gemma":[0.9998652,0.00002523704,0.000036159392,0.000009556873,0.000020780144,0.00004317963],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001569876,0.00020687723,0.00019468927,0.00013633631,0.0005487522,0.00030324302,0.00045284306,0.00045933088,0.00159799],"category_scores_gemma":[0.00031419194,0.00013550838,0.0001600802,0.00016286912,0.0003602327,0.00034966203,0.00021155529,0.0007849763,0.00026522804],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002739941,0.00014153775,0.0028108002,0.00035474807,0.00004055457,0.0015892186,0.00023474151,0.00867648,0.9644015,0.0035844345,0.0059939693,0.00943204],"study_design_scores_gemma":[0.00062205264,0.0014029026,0.038330156,0.00012090444,0.00024925676,0.003261308,0.0009416007,0.113816194,0.802464,0.004212523,0.034410346,0.0001686271],"about_ca_topic_score_codex":0.00179433,"about_ca_topic_score_gemma":0.0016376285,"teacher_disagreement_score":0.00179433,"about_ca_system_score_codex":0.00084700057,"about_ca_system_score_gemma":0.00031325547,"threshold_uncertainty_score":0.0061454177},"labels":[],"label_agreement":null},{"id":"W1969481477","doi":"10.1371/journal.pone.0007582","title":"Study of Human RIG-I Polymorphisms Identifies Two Variants with an Opposite Impact on the Antiviral Immune Response","year":2009,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Agence Nationale de la Recherche; Deutsche Forschungsgemeinschaft; Centre National de la Recherche Scientifique; Deutsches Krebsforschungszentrum; McGill University","keywords":"Biology; RIG-I; Genetics; Frameshift mutation; Single-nucleotide polymorphism; Mutation; Immune system; Innate immune system; Gene; Genotype","score_opus":0.03976016160237952,"score_gpt":0.288707299377408,"score_spread":0.2489471377750285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969481477","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99626833,0.00040135096,0.0024623987,0.000053564112,0.000012460426,0.00001615417,0.00036864716,0.000025351988,0.00039180007],"genre_scores_gemma":[0.99776316,0.00008344217,0.0017373395,0.000034133678,0.000006841067,0.000008294744,0.00022425017,0.000009335928,0.00013305809],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998227,0.000050280465,0.00002178545,0.000052929485,0.000033326538,0.000018908222],"domain_scores_gemma":[0.9997489,0.000089358306,0.00008001392,0.000028896136,0.000018289265,0.00003460635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025116117,0.0004669084,0.00030087843,0.00020314282,0.00012585944,0.00021329838,0.00017311692,0.0004496548,0.0017661637],"category_scores_gemma":[0.00033153457,0.00011238713,0.00048440072,0.00021830137,0.00035403718,0.00010129208,0.00015709212,0.0004702707,0.0004325616],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014153076,0.00012613423,0.018791039,0.00007346323,0.00015122083,0.0008635763,0.00006491632,0.0017963083,0.96856874,0.0005106532,0.000103785664,0.0075347717],"study_design_scores_gemma":[0.00034335314,0.0022951972,0.1122599,0.000052252966,0.00051050924,0.0155152995,0.00012951334,0.015336208,0.84835017,0.0010609872,0.0040726042,0.00007398071],"about_ca_topic_score_codex":0.0003893586,"about_ca_topic_score_gemma":0.00037822014,"teacher_disagreement_score":0.0017661637,"about_ca_system_score_codex":0.00023855103,"about_ca_system_score_gemma":0.00020506262,"threshold_uncertainty_score":0.0059084296},"labels":[],"label_agreement":null},{"id":"W1970939001","doi":"10.1038/gene.2011.69","title":"Refinement of the genetics of the host response to Salmonella infection in MOLF/Ei: regulation of type 1 IFN and TRP3 pathways by Ity2","year":2011,"lang":"en","type":"article","venue":"Genes and Immunity","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Memorial University of Newfoundland; McGill University","funders":"Canadian Institutes of Health Research; Génome Québec; McGill University","keywords":"Biology; Salmonella; Congenic; Locus (genetics); Allele; Microbiology; Typhoid fever; Salmonella typhi; Genetics; Virology; Gene; Bacteria; Escherichia coli","score_opus":0.025959552828302836,"score_gpt":0.22755692836387847,"score_spread":0.20159737553557563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970939001","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9718775,0.00029654795,0.020357596,0.0007188087,0.00012914339,0.0002000271,0.0012465153,0.00050398055,0.004669921],"genre_scores_gemma":[0.9615167,0.00033396023,0.026572349,0.0003464146,0.000028336228,0.0002166534,0.00081031886,0.0007622811,0.009413131],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995646,0.00010278055,0.00005363125,0.0000655359,0.00012636014,0.000087183216],"domain_scores_gemma":[0.9994698,0.00015219452,0.0001222521,0.00009532332,0.000035732508,0.00012472739],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004773426,0.0007461097,0.00039325378,0.00086159824,0.00044326409,0.0005584416,0.00083691336,0.0007372332,0.0028832133],"category_scores_gemma":[0.00035090162,0.00042423583,0.0006973376,0.00032245988,0.00069784455,0.00033711732,0.00074990117,0.0024519593,0.0009319285],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002430474,0.00006631461,0.000121457255,0.000016320782,0.0000053514937,0.00005716939,0.000025880983,0.0001529595,0.99741435,0.0007005648,0.000046467077,0.0011501004],"study_design_scores_gemma":[0.00009302826,0.00020805502,0.0020513635,0.0000115212215,0.000025354653,0.00021829778,0.00006740491,0.0033998822,0.9892426,0.00018040864,0.004481716,0.000020351268],"about_ca_topic_score_codex":0.0019099596,"about_ca_topic_score_gemma":0.004170512,"teacher_disagreement_score":0.0028832133,"about_ca_system_score_codex":0.0010201305,"about_ca_system_score_gemma":0.00069045566,"threshold_uncertainty_score":0.009645343},"labels":[],"label_agreement":null},{"id":"W1971047073","doi":"10.1016/j.dci.2014.08.007","title":"Atlantic salmon possesses two clusters of type I interferon receptor genes on different chromosomes, which allows for a larger repertoire of interferon receptors than in zebrafish and mammals","year":2014,"lang":"en","type":"article","venue":"Developmental & Comparative Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada; Tromsø Forskningsstiftelse","keywords":"Biology; Receptor; Zebrafish; Interferon; Gene; Molecular biology; Repertoire; Cell biology; Genetics","score_opus":0.022124397356852694,"score_gpt":0.27560919930277594,"score_spread":0.25348480194592327,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971047073","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99352574,0.00035498684,0.003728897,0.000041384563,0.000011492998,0.000010555041,0.00057539134,0.00004841152,0.0017030822],"genre_scores_gemma":[0.98944515,0.00021950727,0.0044543077,0.000066316534,0.000007782617,0.000026275251,0.0015296147,0.00001702828,0.004234046],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999082,0.00000576728,0.000009687675,0.0000356223,0.000023109327,0.000017607847],"domain_scores_gemma":[0.9998834,0.00001594222,0.000042065974,0.00001347752,0.000019524434,0.0000255053],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007461982,0.00020150328,0.00023002854,0.0003756985,0.00022738044,0.00019327029,0.000120182194,0.000187435,0.0023471932],"category_scores_gemma":[0.00012090428,0.00013206893,0.00032895725,0.0002511243,0.00016884583,0.00016415963,0.0004107724,0.00024130224,0.0004983525],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017938981,0.000009949306,0.014982736,0.000059243597,0.000015470336,0.00015151223,0.00010384969,0.00003988404,0.9766185,0.0001722809,0.000053029195,0.0076141264],"study_design_scores_gemma":[0.000053294076,0.0005855004,0.8575687,0.00003698765,0.0001079881,0.0028234834,0.0005335311,0.00063209474,0.12610118,0.00028593442,0.011216008,0.00005540026],"about_ca_topic_score_codex":0.0044552693,"about_ca_topic_score_gemma":0.008872533,"teacher_disagreement_score":0.0044552693,"about_ca_system_score_codex":0.0002577291,"about_ca_system_score_gemma":0.000322375,"threshold_uncertainty_score":0.008858681},"labels":[],"label_agreement":null},{"id":"W1971226986","doi":"10.1371/journal.ppat.1000007","title":"The Interferon Response Inhibits HIV Particle Production by Induction of TRIM22","year":2008,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":278,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; Fondation pour la Recherche Médicale","keywords":"Interferon; Biology; Gene knockdown; Virology; Reverse transcriptase; Viral replication; Group-specific antigen; Virus; Gene; Genetics; RNA","score_opus":0.023843612219258705,"score_gpt":0.2264156673196204,"score_spread":0.2025720551003617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971226986","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98620784,0.005474865,0.004435068,0.0002086643,0.00005117788,0.00003732364,0.00048336526,0.00013636726,0.0029653092],"genre_scores_gemma":[0.9907294,0.001445261,0.0034087417,0.00013298525,0.000023226428,0.000040256095,0.0008472439,0.000031563937,0.003341252],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998771,0.000027548402,0.000012464589,0.000024503222,0.000031538675,0.00002677549],"domain_scores_gemma":[0.99991465,0.00001786682,0.000024240058,0.000014576103,0.000011497968,0.000017302933],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014965421,0.00023514636,0.00022240002,0.00013569898,0.00011881889,0.00028054966,0.00010874044,0.00019329296,0.0013562242],"category_scores_gemma":[0.00012046007,0.00010003787,0.00023072046,0.0000802813,0.00011596644,0.00010630208,0.0001950637,0.0004175382,0.0006583335],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004386055,0.0000072169933,0.0001077962,0.000020962956,0.0000024931392,0.000020721278,0.0000047501167,0.000019123976,0.9987802,0.000041592324,0.000035741687,0.0009156937],"study_design_scores_gemma":[0.000006625984,0.00009452942,0.0022232444,0.0000047605304,0.0000072024523,0.0001430344,0.000009544183,0.00037134107,0.9942889,0.000027739647,0.0028211437,0.0000017912068],"about_ca_topic_score_codex":0.00014043391,"about_ca_topic_score_gemma":0.00025866748,"teacher_disagreement_score":0.0013562242,"about_ca_system_score_codex":0.00020163492,"about_ca_system_score_gemma":0.00011524594,"threshold_uncertainty_score":0.0045369864},"labels":[],"label_agreement":null},{"id":"W1972126235","doi":"10.1371/journal.pone.0030802","title":"Coronavirus Papain-like Proteases Negatively Regulate Antiviral Innate Immune Response through Disruption of STING-Mediated Signaling","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":275,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; National Natural Science Foundation of China; U.S. Department of Defense","keywords":"Sting; Innate immune system; Stimulator of interferon genes; IRF3; Cell biology; Biology; Interferon; TANK-binding kinase 1; RIG-I; Inflammasome; Endoplasmic reticulum; Proteases; Signal transduction; Virology; Immune system; Immunology; Inflammation; Biochemistry","score_opus":0.07945372223375477,"score_gpt":0.28741510500309425,"score_spread":0.20796138276933948,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972126235","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935867,0.0031678092,0.0017248673,0.00009542425,0.000022352637,0.000015909609,0.0002063142,0.000065861226,0.0011147764],"genre_scores_gemma":[0.99762255,0.0006084053,0.0007398631,0.00003086378,0.000007530078,0.000011235363,0.00020435786,0.000005716755,0.0007694309],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998592,0.000035070247,0.000015863532,0.000025179866,0.000030723622,0.000033969405],"domain_scores_gemma":[0.99991167,0.000011575169,0.000031937212,0.000012713029,0.000009662694,0.000022436716],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012655107,0.00032750622,0.00019355761,0.00012680654,0.00012014714,0.0003142249,0.00011202304,0.0002085267,0.0008735733],"category_scores_gemma":[0.000085438754,0.000107368396,0.00024098795,0.000085239786,0.00022615043,0.0002081838,0.00016813814,0.00042453338,0.00026964722],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005731813,0.000008617835,0.0001509783,0.00002066651,0.0000035521157,0.0000293711,0.0000049295177,0.000022194035,0.99916863,0.00004785133,0.000015390315,0.00047060204],"study_design_scores_gemma":[0.000017994123,0.00014659364,0.0109349545,0.000006822169,0.000014952305,0.0004131617,0.000025893924,0.0012260188,0.98512506,0.00007919567,0.002005897,0.0000035538285],"about_ca_topic_score_codex":0.00016528941,"about_ca_topic_score_gemma":0.00022436354,"teacher_disagreement_score":0.0008735733,"about_ca_system_score_codex":0.0002679121,"about_ca_system_score_gemma":0.000112936104,"threshold_uncertainty_score":0.0029223561},"labels":[],"label_agreement":null},{"id":"W1972526106","doi":"10.1016/j.ejpn.2013.07.005","title":"Epilepsy in Aicardi–Goutières syndrome","year":2013,"lang":"en","type":"article","venue":"European Journal of Paediatric Neurology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Alberta Health Services","funders":"Deutsche Forschungsgemeinschaft","keywords":"Epilepsy; Semiology; Dystonia; Electroencephalography; Status epilepticus; Seizure types; Pediatrics; Medicine; Encephalopathy; Neuroimaging; Psychology; Internal medicine; Psychiatry","score_opus":0.006710846531660098,"score_gpt":0.19619221286220462,"score_spread":0.18948136633054452,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972526106","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97969234,0.0047415295,0.0006768984,0.002932999,0.0001827787,0.000031292304,0.000100590776,0.00007086326,0.01157073],"genre_scores_gemma":[0.9981193,0.0006462981,0.00017257451,0.00036213812,0.00020170367,0.0000068022687,0.00004176188,0.000005974419,0.0004434139],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99969447,0.00006677263,0.00005377508,0.000039758113,0.00003745501,0.00010789848],"domain_scores_gemma":[0.99911684,0.00044649842,0.00019454611,0.00005125253,0.00004175206,0.0001490954],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023394726,0.00093318615,0.0005229266,0.0012774117,0.00073260005,0.000545371,0.00048510745,0.0023252598,0.003075197],"category_scores_gemma":[0.0022749905,0.0002679747,0.00040828748,0.00070545095,0.0012373799,0.0007444857,0.0005956083,0.0012584134,0.00047641507],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038841477,0.000052413674,0.047722664,0.00006103872,0.00003905267,0.9416836,0.00020343601,0.00018154227,0.0036689935,0.0005801712,0.0008565049,0.0045622014],"study_design_scores_gemma":[0.00007228908,0.00009365802,0.05305536,0.000046939833,0.00006443458,0.9424734,0.00024501048,0.0006328139,0.0009225326,0.0011191746,0.001256465,0.000017911618],"about_ca_topic_score_codex":0.002941221,"about_ca_topic_score_gemma":0.002052447,"teacher_disagreement_score":0.003075197,"about_ca_system_score_codex":0.0005758003,"about_ca_system_score_gemma":0.00054768287,"threshold_uncertainty_score":0.010287523},"labels":[],"label_agreement":null},{"id":"W1972931075","doi":"10.1089/088282402317340224","title":"PKR Protection Against Intranasal Vesicular Stomatitis Virus Infection Is Mouse Strain Dependent","year":2002,"lang":"en","type":"article","venue":"Viral Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development","keywords":"Protein kinase R; Vesicular stomatitis virus; Interferon; Virology; Biology; Virus; EIF-2 kinase; Antiviral protein; Vesicular stomatitis Indiana virus; Viral replication; RNA; Microbiology; Protein kinase A; Kinase; Gene; Mitogen-activated protein kinase kinase; Genetics","score_opus":0.016096514665448418,"score_gpt":0.22019752754074834,"score_spread":0.20410101287529991,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972931075","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98742,0.0024298115,0.0048572645,0.0003722745,0.00009522967,0.00007860198,0.0009444836,0.00042568208,0.0033765777],"genre_scores_gemma":[0.9866085,0.0014388572,0.0035219693,0.00016435045,0.00005536081,0.00009737998,0.0012483113,0.00010707142,0.0067581767],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994136,0.00010151034,0.00006679163,0.00016458066,0.00014004325,0.00011344696],"domain_scores_gemma":[0.99928707,0.0001003956,0.0002608866,0.00012776272,0.00005864082,0.00016531501],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004491722,0.0006801646,0.00047382925,0.0008942309,0.0001644123,0.00041039425,0.00031565502,0.00061995594,0.0030907188],"category_scores_gemma":[0.00023288881,0.0002857655,0.0004408787,0.00016608185,0.000460094,0.00043793474,0.0003416883,0.0016169178,0.0010283055],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015528989,0.00005478544,0.00016360857,0.000023583787,0.000004849739,0.000026884849,0.0000071918116,0.000018278288,0.9986411,0.00005471495,0.000022017839,0.00082771847],"study_design_scores_gemma":[0.00003770776,0.0016086104,0.009379935,0.000020260264,0.000020867401,0.0006756388,0.000026650821,0.00036143395,0.98645836,0.000088730405,0.0013134074,0.00000850031],"about_ca_topic_score_codex":0.00016866755,"about_ca_topic_score_gemma":0.0002790776,"teacher_disagreement_score":0.0030907188,"about_ca_system_score_codex":0.00019427242,"about_ca_system_score_gemma":0.00021057425,"threshold_uncertainty_score":0.010339439},"labels":[],"label_agreement":null},{"id":"W1973877707","doi":"10.1016/j.cyto.2010.04.010","title":"The interface between the innate interferon response and expression of host retroviral restriction factors","year":2010,"lang":"en","type":"review","venue":"Cytokine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Innate immune system; Biology; Intrinsic immunity; Interferon; Transcription factor; Retrovirus; Immunity; Immunology; Gene; Cell biology; Genetics; Immune system","score_opus":0.02869552472113528,"score_gpt":0.3185043131158541,"score_spread":0.2898087883947188,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973877707","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00024110984,0.9978684,0.00040974366,0.0002430572,0.00030357938,0.0000029268986,0.000012431509,0.000007070491,0.00091155927],"genre_scores_gemma":[0.0018368514,0.995596,0.00047045236,0.00030272634,0.00056331366,0.000008272893,0.000046552846,0.0000028626748,0.0011729739],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998202,0.00002743389,0.000024966743,0.000040381976,0.00006696054,0.000020100695],"domain_scores_gemma":[0.99972576,0.00012340573,0.000051777013,0.000010610279,0.000055616576,0.0000328217],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006243331,0.0010345264,0.0013041104,0.00095626153,0.0002030547,0.0012435095,0.0009325906,0.0013731774,0.001235658],"category_scores_gemma":[0.0004626684,0.00032852098,0.0002258524,0.0012359463,0.0008395563,0.0018316357,0.0006292996,0.0021216373,0.001522357],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018426352,0.00005771534,0.00032467564,0.0066991886,0.000044637094,0.00046572974,0.00006971108,0.00052650325,0.027815066,0.009358,0.023131784,0.9313228],"study_design_scores_gemma":[0.00002414387,0.00007588527,0.0017048537,0.001403612,0.000056338744,0.0022537014,0.00009453653,0.00019066515,0.0058048083,0.005488465,0.9828756,0.00002729747],"about_ca_topic_score_codex":0.0006052151,"about_ca_topic_score_gemma":0.00095378567,"teacher_disagreement_score":0.0013731774,"about_ca_system_score_codex":0.000927856,"about_ca_system_score_gemma":0.0009281204,"threshold_uncertainty_score":0.0067320466},"labels":[],"label_agreement":null},{"id":"W1974168359","doi":"10.1038/cddis.2013.296","title":"Knockdown of specific host factors protects against influenza virus-induced cell death","year":2013,"lang":"en","type":"article","venue":"Cell Death and Disease","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Children's Hospital Research Institute of Manitoba; Public Health Agency of Canada; University of Manitoba; Research Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Manitoba Health Research Council; Canadian Institutes of Health Research; University of Ottawa; Health Sciences Centre Foundation","keywords":"Gene knockdown; Gene silencing; Biology; Programmed cell death; Viral replication; RNA interference; Virus; Virology; Influenza A virus; Gene; Cell biology; Apoptosis; Genetics; RNA","score_opus":0.02132740291401366,"score_gpt":0.23137369303123032,"score_spread":0.21004629011721665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974168359","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9896381,0.0020852874,0.0055819284,0.000077358796,0.000041846277,0.0000907509,0.0007489756,0.00022067312,0.0015149678],"genre_scores_gemma":[0.9884412,0.0018734513,0.0051157335,0.000063366795,0.000012470809,0.00013544987,0.0013028175,0.00005883688,0.002996679],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980336,0.000024105737,0.00003334443,0.00004762228,0.000053444204,0.000038128685],"domain_scores_gemma":[0.9998903,0.000028094528,0.000028724915,0.00001722224,0.000014622892,0.000020927118],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018456129,0.0003880955,0.00043978886,0.00021341821,0.00014618004,0.00029724799,0.00018310538,0.00022290742,0.0008414412],"category_scores_gemma":[0.00010647871,0.00014842195,0.00032126773,0.00018077127,0.00021930003,0.00014083419,0.00014330877,0.00043737027,0.00031876325],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045378318,0.000020127023,0.00007592419,0.00003056876,0.0000054161333,0.000016550795,0.000009038297,0.000037233327,0.99882466,0.000036237318,0.000024378702,0.00087456364],"study_design_scores_gemma":[0.000013976353,0.00039380725,0.0021400887,0.0000043777522,0.000026118836,0.000088547415,0.000016192023,0.00058335584,0.9947902,0.000015536385,0.0019244943,0.0000033799042],"about_ca_topic_score_codex":0.00043346846,"about_ca_topic_score_gemma":0.0010280655,"teacher_disagreement_score":0.0008414412,"about_ca_system_score_codex":0.00025534144,"about_ca_system_score_gemma":0.00024619975,"threshold_uncertainty_score":0.002814889},"labels":[],"label_agreement":null},{"id":"W1974174229","doi":"10.1177/1753425912447130","title":"The <i>LPS2</i> mutation in TRIF is atheroprotective in hyperlipidemic low density lipoprotein receptor knockout mice","year":2012,"lang":"en","type":"article","venue":"Innate Immunity","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research","keywords":"Knockout mouse; LDL receptor; TRIF; Gene knockout; Mutation; Hyperlipidemia; Receptor; Biology; Lipoprotein; Internal medicine; Chemistry; Genetics; Gene; Medicine; Endocrinology; Cholesterol; Diabetes mellitus; Toll-like receptor","score_opus":0.012147295972050496,"score_gpt":0.24803189444638207,"score_spread":0.23588459847433157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974174229","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9731367,0.0009939614,0.0124786785,0.0009456916,0.00030431885,0.00034399168,0.0057148286,0.0013558156,0.0047260127],"genre_scores_gemma":[0.96717495,0.0011616912,0.012066027,0.0007809723,0.00018094206,0.00071357965,0.004712728,0.0008668215,0.012342309],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992035,0.000191235,0.00013441339,0.00020283568,0.00014298302,0.00012510235],"domain_scores_gemma":[0.99891293,0.000116262665,0.0005287862,0.00007658513,0.0000468482,0.00031864643],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005791605,0.0014483277,0.0006140226,0.0013022288,0.00047239085,0.00065220834,0.0006168328,0.0015594014,0.005940168],"category_scores_gemma":[0.00029926264,0.0007943511,0.00095216633,0.0004253097,0.000970057,0.00042186174,0.00059229153,0.0017988356,0.002384566],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00058193266,0.00016817331,0.00018831356,0.00005462079,0.00002363778,0.00033353106,0.00002183485,0.00008639533,0.9974475,0.00028451206,0.00018507057,0.00062449556],"study_design_scores_gemma":[0.0006375032,0.0016606841,0.012196762,0.000102317535,0.0001451896,0.00508841,0.00013862256,0.003565786,0.9675598,0.00039262627,0.008441975,0.00007023763],"about_ca_topic_score_codex":0.0006391265,"about_ca_topic_score_gemma":0.0008126085,"teacher_disagreement_score":0.005940168,"about_ca_system_score_codex":0.00052203867,"about_ca_system_score_gemma":0.00038478,"threshold_uncertainty_score":0.019871831},"labels":[],"label_agreement":null},{"id":"W1974218875","doi":"10.1016/j.mrfmmm.2011.03.018","title":"The Aicardi–Goutières syndrome. Molecular and clinical features of RNAse deficiency and microRNA overload","year":2011,"lang":"en","type":"article","venue":"Mutation research. Fundamental and molecular mechanisms of mutagenesis","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"Associazione Italiana per la Ricerca sul Cancro","keywords":"microRNA; RNase P; Medicine; Genetics; Biology; Computational biology; Gene; RNA","score_opus":0.03271255259095161,"score_gpt":0.3148149873443579,"score_spread":0.2821024347534063,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974218875","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98112077,0.0074067097,0.0027208242,0.0015260949,0.00016016667,0.00005978613,0.0003223315,0.00021967184,0.0064637046],"genre_scores_gemma":[0.9960161,0.0013649473,0.0013991322,0.00018080224,0.00022318306,0.000021792393,0.000094271214,0.000019945865,0.0006797069],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.99972576,0.000065057226,0.000038133585,0.00006291039,0.00007507791,0.00003304813],"domain_scores_gemma":[0.9988084,0.0005921087,0.0002352727,0.00008009867,0.000043990687,0.0002401534],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030917523,0.0017418448,0.0008101777,0.0022180998,0.00055700366,0.00049828336,0.0006134222,0.0022746853,0.0031333861],"category_scores_gemma":[0.0021066964,0.000609686,0.0003918258,0.0010563402,0.001796121,0.00065336644,0.00042864995,0.0010501617,0.00051525264],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012702582,0.00020789394,0.05929112,0.0002773184,0.00018781904,0.79324746,0.00047321426,0.000565186,0.119687855,0.0032860176,0.0016436506,0.019862266],"study_design_scores_gemma":[0.00011351146,0.00017761641,0.05808982,0.000047909234,0.00012327006,0.93296164,0.00008337768,0.0006691297,0.004502434,0.0017190344,0.0014754557,0.000036860845],"about_ca_topic_score_codex":0.0010643445,"about_ca_topic_score_gemma":0.0008207064,"teacher_disagreement_score":0.0031333861,"about_ca_system_score_codex":0.0003300155,"about_ca_system_score_gemma":0.00044350734,"threshold_uncertainty_score":0.010482192},"labels":[],"label_agreement":null},{"id":"W1976924091","doi":"10.1038/cr.2007.107","title":"RIG-I has guts: Identification of a role for RIG-I in colitis development","year":2007,"lang":"en","type":"letter","venue":"Cell Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Ulcerative colitis; Inflammatory bowel disease; Biology; Immunology; Disease; Immune system; Colitis; Pathogenesis; Crohn's disease; Etiology; Immunity; ATG16L1; Inflammation; Medicine; Pathology","score_opus":0.09323153923293638,"score_gpt":0.3621802578342243,"score_spread":0.26894871860128794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976924091","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.010412885,0.011892211,0.001896084,0.9234024,0.04151776,0.00003725258,0.00010610673,0.00015378161,0.010581434],"genre_scores_gemma":[0.17578746,0.01799025,0.0047568697,0.6201744,0.12816335,0.00023603487,0.00023807856,0.00013073813,0.05252275],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993293,0.00026854684,0.000055670396,0.00007687168,0.0001752675,0.00009445824],"domain_scores_gemma":[0.9983612,0.0010718693,0.00007621323,0.00011824078,0.00018977567,0.00018272057],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010826373,0.0007750589,0.001099477,0.00029164075,0.0010190309,0.0017542179,0.0006581085,0.011131457,0.0044451817],"category_scores_gemma":[0.0040821275,0.0002989213,0.0008174801,0.00019098735,0.0019463624,0.0013016119,0.00079257274,0.015274362,0.0023330618],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030218922,0.00023258314,0.0023992,0.0003966732,0.000116750234,0.01647161,0.0002898494,0.0004640006,0.018678822,0.01845256,0.8418562,0.097619854],"study_design_scores_gemma":[0.0010563333,0.0009166858,0.0036193011,0.0002110401,0.0001566943,0.017679792,0.00045052168,0.0022902847,0.016742183,0.032544803,0.9242321,0.00010022889],"about_ca_topic_score_codex":0.0003100043,"about_ca_topic_score_gemma":0.00041523363,"teacher_disagreement_score":0.011131457,"about_ca_system_score_codex":0.0017093607,"about_ca_system_score_gemma":0.0005284857,"threshold_uncertainty_score":0.014870644},"labels":[],"label_agreement":null},{"id":"W1977033276","doi":"10.1139/o08-124","title":"Kinetics of human peptidylarginine deiminase 2 (hPAD2) — Reduction of Ca<sup>2+</sup> dependence by phospholipids and assessment of proposed inhibition by paclitaxel side chains","year":2008,"lang":"en","type":"article","venue":"Biochemistry and Cell Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Chemistry; Biochemistry; Enzyme; Phosphatidylserine; Phosphatidylcholine; Citrullination; In vitro; Myelin; Active site; Enzyme kinetics; Arginine; Stereochemistry; Phospholipid; Biology; Central nervous system; Amino acid","score_opus":0.009459758238621609,"score_gpt":0.2467205356640296,"score_spread":0.237260777425408,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977033276","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9925063,0.0022789857,0.0032201929,0.00008271831,0.00002695477,0.000032359116,0.0006807712,0.000057762438,0.001113818],"genre_scores_gemma":[0.9936893,0.0007239318,0.0019167116,0.000028609295,0.000010687057,0.000033908153,0.0011897058,0.0000236316,0.002383467],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976104,0.00006134288,0.000023668557,0.00005660221,0.00004995709,0.00004736988],"domain_scores_gemma":[0.9995957,0.00017427519,0.00007575575,0.0000403405,0.000070595495,0.00004338992],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033644997,0.0003735742,0.00032173793,0.00013381778,0.00008355355,0.0003252265,0.00024526773,0.00030076198,0.00084988354],"category_scores_gemma":[0.00063126994,0.00017544655,0.00019192458,0.00019616133,0.0001776091,0.00025651022,0.00011309269,0.00039355175,0.00050000503],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011196854,0.00006880494,0.001341966,0.00006414525,0.00002446127,0.000049586422,0.00003700484,0.0007573588,0.99379975,0.00009847134,0.00008568623,0.0025532283],"study_design_scores_gemma":[0.000026361578,0.00036537007,0.0040746876,0.0000038381063,0.000009499423,0.00010161294,0.000019524496,0.005702574,0.9886467,0.00003969664,0.0010007254,0.0000093227345],"about_ca_topic_score_codex":0.0009544306,"about_ca_topic_score_gemma":0.00074015715,"teacher_disagreement_score":0.0009544306,"about_ca_system_score_codex":0.0003967395,"about_ca_system_score_gemma":0.00014331247,"threshold_uncertainty_score":0.0028786063},"labels":[],"label_agreement":null},{"id":"W1977285843","doi":"10.1016/j.chom.2012.11.009","title":"An ERK-p38 Subnetwork Coordinates Host Cell Apoptosis and Necrosis during Coxsackievirus B3 Infection","year":2013,"lang":"en","type":"article","venue":"Cell Host & Microbe","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Apoptosis; Host (biology); Necrosis; Coxsackievirus; p38 mitogen-activated protein kinases; MAPK/ERK pathway; Virology; Tumor necrosis factor alpha; Subnetwork; Microbiology; Immunology; Cell biology; Virus; Signal transduction; Enterovirus; Genetics","score_opus":0.004987416187045418,"score_gpt":0.20562286922253908,"score_spread":0.20063545303549365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977285843","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953778,0.00071129715,0.0014331195,0.00019810574,0.000028173305,0.00001171038,0.00022938605,0.00006359866,0.0019468067],"genre_scores_gemma":[0.9977622,0.0002473138,0.00043466932,0.00003881354,0.000007603632,0.00001069393,0.00019558608,0.000009108473,0.0012939224],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998221,0.000023651295,0.000006514573,0.000026432352,0.000032851607,0.00008839433],"domain_scores_gemma":[0.9999064,0.000011182852,0.00002652815,0.000009581525,0.000014912553,0.000031336775],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016899774,0.00027577323,0.0001658138,0.00020267676,0.00041240713,0.00055077777,0.00021054874,0.0002483267,0.001302447],"category_scores_gemma":[0.00017644861,0.00016740753,0.00021408463,0.00012070177,0.00026550278,0.0005050806,0.00043986703,0.00061476865,0.00032877008],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009408354,0.000056711717,0.0019892056,0.00005111471,0.000012174768,0.0002340685,0.00006415827,0.00042594798,0.9919682,0.0010023196,0.00023639417,0.0030189392],"study_design_scores_gemma":[0.00015134373,0.00064517156,0.18879917,0.000056266497,0.00008887609,0.0010739716,0.0010059256,0.016083889,0.78178763,0.0030567788,0.007219962,0.00003092467],"about_ca_topic_score_codex":0.0008641001,"about_ca_topic_score_gemma":0.0017303613,"teacher_disagreement_score":0.001302447,"about_ca_system_score_codex":0.00064727454,"about_ca_system_score_gemma":0.00035579223,"threshold_uncertainty_score":0.004696369},"labels":[],"label_agreement":null},{"id":"W1978216180","doi":"10.1371/journal.pone.0010575","title":"Hepatitis C Virus Controls Interferon Production through PKR Activation","year":2010,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":119,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Centre National de la Recherche Scientifique","keywords":"Protein kinase R; Internal ribosome entry site; EIF-2 kinase; Interferon; Biology; Virology; Hepatitis C virus; Eukaryotic initiation factor; Gene silencing; NS3; Initiation factor; NS2-3 protease; RNA silencing; RNA; Virus; Protein kinase A; Kinase; Translation (biology); RNA interference; Messenger RNA; Cell biology; Mitogen-activated protein kinase kinase; Cyclin-dependent kinase 2; Gene; Biochemistry","score_opus":0.029152025990619338,"score_gpt":0.23710574192784342,"score_spread":0.2079537159372241,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978216180","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9811149,0.007424236,0.003911685,0.00015772619,0.00010430693,0.000057772108,0.0009258169,0.00028162228,0.0060219322],"genre_scores_gemma":[0.99150765,0.0014331319,0.0017995373,0.000051350307,0.000025237101,0.000040293176,0.0007725252,0.000028697264,0.0043415483],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998362,0.000024823647,0.00001394906,0.000042747713,0.00004395473,0.00003827023],"domain_scores_gemma":[0.9999366,0.000008189455,0.000018727962,0.000012198866,0.000013263242,0.0000110617075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011967135,0.00025427566,0.00024834348,0.00015665131,0.00014161755,0.00032221831,0.00010293816,0.00016308001,0.0015550294],"category_scores_gemma":[0.000110585126,0.00010619965,0.00020994594,0.00008605981,0.00013703987,0.00015295914,0.00017941452,0.00033143657,0.00080468605],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013349652,0.000014412923,0.00016431254,0.000037550537,0.0000021157366,0.00003212915,0.000008401766,0.000029062114,0.99823475,0.0000565687,0.0000367668,0.0012504397],"study_design_scores_gemma":[0.000031651016,0.00024403502,0.008236356,0.000010156351,0.000009120623,0.00032371227,0.00001681805,0.0009828344,0.98620343,0.00008274441,0.003852052,0.0000069495245],"about_ca_topic_score_codex":0.0003121929,"about_ca_topic_score_gemma":0.00035868943,"teacher_disagreement_score":0.0015550294,"about_ca_system_score_codex":0.00034840227,"about_ca_system_score_gemma":0.0001568628,"threshold_uncertainty_score":0.005202055},"labels":[],"label_agreement":null},{"id":"W1978651095","doi":"10.1128/jvi.02587-08","title":"Induction of Alpha/Beta Interferon by Myxoma Virus Is Selectively Abrogated When Primary Mouse Embryo Fibroblasts Become Immortalized","year":2009,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Robarts Clinical Trials; Western University","funders":"Robarts Research Institute; Canadian Institutes of Health Research","keywords":"Biology; Myxoma virus; Immortalised cell line; Virus; Interferon; Embryo; Virology; Cell culture; Viral replication; Myxoma; Phenotype; BETA (programming language); Permissiveness; Cell biology; Gene; Genetics","score_opus":0.008766045175891518,"score_gpt":0.24399360273194545,"score_spread":0.23522755755605393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978651095","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9888192,0.0020695743,0.0053517073,0.00005667441,0.000077366174,0.00003070794,0.0005955828,0.000119489625,0.002879663],"genre_scores_gemma":[0.9923144,0.00087880343,0.0026764583,0.00003861031,0.00001848602,0.0000355143,0.0008268118,0.00003655655,0.0031743394],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976903,0.0000354996,0.00003399032,0.000046985035,0.000058998456,0.000055539003],"domain_scores_gemma":[0.9997255,0.000095029616,0.000049931547,0.000062464154,0.000023236875,0.000043840348],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017774022,0.00029249451,0.0003102453,0.00016202108,0.00012822369,0.000286454,0.00018564657,0.00020151136,0.0014245252],"category_scores_gemma":[0.00017062124,0.0001588813,0.0002359092,0.00008942298,0.00015676307,0.00015627354,0.00024474587,0.0005814418,0.0007784813],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021376081,0.000005458326,0.00009797671,0.000007670148,0.0000015148106,0.000039141843,0.000009493434,0.0000054509346,0.9995127,0.000038992628,0.000009767318,0.00025053372],"study_design_scores_gemma":[0.0000028248912,0.00008637208,0.002900642,0.0000041688795,0.0000049714267,0.0002952459,0.000018248656,0.00017187085,0.99496007,0.00002742527,0.0015264441,0.0000017248316],"about_ca_topic_score_codex":0.00025641316,"about_ca_topic_score_gemma":0.00034060044,"teacher_disagreement_score":0.0014245252,"about_ca_system_score_codex":0.00014662185,"about_ca_system_score_gemma":0.00012071823,"threshold_uncertainty_score":0.0047655106},"labels":[],"label_agreement":null},{"id":"W1979074851","doi":"10.1371/annotation/8fa70b21-32e7-4ed3-b397-ab776b5bbf30","title":"Correction: Systems Analysis of a RIG-I Agonist Inducing Broad Spectrum Inhibition of Virus Infectivity","year":2013,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Armand Frappier Museum; McGill University; Institut National de la Recherche Scientifique; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Infectivity; Broad spectrum; Agonist; Spectrum (functional analysis); Virology; Virus; Computational biology; Biology; Chemistry; Physics; Receptor; Genetics; Combinatorial chemistry","score_opus":0.013947318765425392,"score_gpt":0.22541664814333343,"score_spread":0.21146932937790802,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979074851","genre_codex":"editorial","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.015493067,0.009309915,0.1599544,0.048454706,0.58152,0.0007176089,0.08457696,0.017009027,0.08296428],"genre_scores_gemma":[0.26672265,0.011549715,0.110081896,0.008055463,0.033599395,0.0008513426,0.065792255,0.0135607375,0.48978662],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983094,0.00033341965,0.00015203768,0.00026787727,0.0008210031,0.00011621435],"domain_scores_gemma":[0.99385697,0.0013329088,0.000316377,0.00054826634,0.0037004536,0.00024504584],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015649794,0.0013503073,0.0008491166,0.0015114321,0.00093759864,0.0018232776,0.0018317604,0.001330021,0.14517558],"category_scores_gemma":[0.018184183,0.00035204136,0.0012820233,0.0014071655,0.0005242839,0.001518018,0.0017625174,0.0018065083,0.035982616],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025551274,0.000020335216,0.0007796076,0.0014710706,0.000086287415,0.00062998803,0.00011736486,0.0037736157,0.0039166566,0.01422715,0.92659813,0.04812424],"study_design_scores_gemma":[0.00006570765,0.00007110364,0.001280351,0.00030582157,0.00006099713,0.0006219394,0.00010329351,0.009199495,0.0045273276,0.008242231,0.9754616,0.00006005083],"about_ca_topic_score_codex":0.008204337,"about_ca_topic_score_gemma":0.005500075,"teacher_disagreement_score":0.14517558,"about_ca_system_score_codex":0.0020782463,"about_ca_system_score_gemma":0.0025384112,"threshold_uncertainty_score":0.48566067},"labels":[],"label_agreement":null},{"id":"W1979782078","doi":"10.1016/j.fsi.2015.02.032","title":"Characterization and expression analyses of five interferon regulatory factor transcripts (Irf4a, Irf4b, Irf7, Irf8, Irf10) in Atlantic cod (Gadus morhua)","year":2015,"lang":"en","type":"article","venue":"Fish & Shellfish Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":48,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"IRF7; Biology; Gadus; IRF8; Interferon regulatory factors; Atlantic cod; Gene; Transcription factor; IRF5; Aeromonas salmonicida; Genetics; Interferon; Gene expression; Molecular biology; Fishery; Bacteria; Fish <Actinopterygii>","score_opus":0.0381345195255566,"score_gpt":0.27553126361871927,"score_spread":0.23739674409316266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979782078","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977069,0.00020559205,0.0008880267,0.00002176939,0.00000775726,0.000008526113,0.00055333157,0.000007977304,0.00060014223],"genre_scores_gemma":[0.99105537,0.00027067895,0.0024875193,0.000060853326,0.000008771211,0.000033196695,0.002538247,0.000017680472,0.0035276518],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999231,0.0000035196445,0.000004978413,0.000024326786,0.000014213741,0.000029880166],"domain_scores_gemma":[0.9998834,0.000021517759,0.000026039072,0.000013319181,0.00003315136,0.000022599848],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011728516,0.00015591425,0.00013911325,0.00031866753,0.0002390082,0.00022763315,0.00013834455,0.00020037194,0.00078140514],"category_scores_gemma":[0.00014517822,0.00014603153,0.0003637671,0.00020871565,0.00019901931,0.00016499117,0.00015053955,0.0003629947,0.0003039713],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001461182,0.00002000274,0.0071516098,0.000021362897,0.0000065313857,0.0000588307,0.000053650576,0.000034584456,0.99061537,0.00005521902,0.000024998113,0.0018118342],"study_design_scores_gemma":[0.00003776029,0.00052523933,0.5152615,0.000018342938,0.00011877901,0.0012707316,0.00089443545,0.0016870763,0.4756614,0.00023668795,0.0042641168,0.00002386491],"about_ca_topic_score_codex":0.0022461999,"about_ca_topic_score_gemma":0.003283158,"teacher_disagreement_score":0.0022461999,"about_ca_system_score_codex":0.00021434443,"about_ca_system_score_gemma":0.00026231233,"threshold_uncertainty_score":0.0044662356},"labels":[],"label_agreement":null},{"id":"W1979838502","doi":"10.1073/pnas.1001755107","title":"Association of RIG-I with innate immunity of ducks to influenza","year":2010,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":494,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Natural Sciences and Engineering Research Council of Canada; American Lebanese Syrian Associated Charities; U.S. Department of Health and Human Services","keywords":"Biology; Virology; RIG-I; Innate immune system; Virus; Influenza A virus subtype H5N1; Influenza A virus; Immune system; Viral replication; Immunity; Microbiology; Immunology","score_opus":0.02200395367676821,"score_gpt":0.29790828246060547,"score_spread":0.27590432878383725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979838502","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99397343,0.0021353,0.0012041773,0.00013154124,0.000022605753,0.000012272871,0.00020744828,0.000030363222,0.0022827964],"genre_scores_gemma":[0.9959409,0.0004917222,0.00068912824,0.000065017084,0.000006669848,0.000012472366,0.0003626903,0.0000060635384,0.0024254504],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991345,0.000015721838,0.000007969681,0.000024566472,0.00001697415,0.000021316728],"domain_scores_gemma":[0.9999167,0.000009389875,0.000024103825,0.000015371992,0.000011226169,0.00002324608],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010418243,0.00016665118,0.00010669399,0.00013470718,0.00012190565,0.00027400392,0.000088847795,0.00019456031,0.00072318537],"category_scores_gemma":[0.00010872312,0.000108860884,0.000193536,0.00004773023,0.00018182956,0.0001243676,0.000192644,0.00029829185,0.00034399453],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000082254715,0.000006975107,0.0016536165,0.000026518579,0.000004113787,0.000073408926,0.00002584762,0.000017207802,0.9971578,0.000057150322,0.00003836002,0.0008566718],"study_design_scores_gemma":[0.000027454227,0.00041243696,0.20305315,0.000044124834,0.000044873326,0.0017283935,0.00024722642,0.0012851999,0.78432715,0.00017341679,0.008642877,0.000013691087],"about_ca_topic_score_codex":0.0008955371,"about_ca_topic_score_gemma":0.0011740112,"teacher_disagreement_score":0.0008955371,"about_ca_system_score_codex":0.0004388876,"about_ca_system_score_gemma":0.00015087928,"threshold_uncertainty_score":0.0031843185},"labels":[],"label_agreement":null},{"id":"W1980006442","doi":"10.1172/jci8934","title":"The viral anti-inflammatory chemokine-binding protein M-T7 reduces intimal hyperplasia after vascular injury","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Viron Therapeutics (Canada); Robarts Clinical Trials; University of Alberta; Western University","funders":"Medical Research Council; Medical Research Council Canada; Heart and Stroke Foundation of Canada","keywords":"Intimal hyperplasia; Restenosis; Chemokine; Neointimal hyperplasia; Medicine; Angioplasty; Immunology; Inflammation; Pathology; Internal medicine; Stent","score_opus":0.01917961535525104,"score_gpt":0.30508674984408773,"score_spread":0.2859071344888367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980006442","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99711823,0.0012904011,0.00047984792,0.000069297486,0.000026675089,0.000021321477,0.000033630287,0.000046340498,0.0009143549],"genre_scores_gemma":[0.99527174,0.0012870715,0.0012775513,0.000060560244,0.000049452257,0.000043676937,0.00021229441,0.000017391088,0.0017802797],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978,0.00005945118,0.000013843017,0.000017033892,0.000056652534,0.000073094125],"domain_scores_gemma":[0.99981123,0.000030488207,0.000044899043,0.000020226373,0.00002309638,0.00006998209],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001786937,0.00046750423,0.000497774,0.00031327282,0.00015653498,0.0002620556,0.00023964046,0.0004521046,0.0007924009],"category_scores_gemma":[0.00031141998,0.00015489846,0.0001917051,0.00013107853,0.00032015386,0.00020091084,0.00013894356,0.0007480815,0.0003017681],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023608657,0.00078265916,0.00035388744,0.00006206924,0.000018686556,0.0000549568,0.000023960947,0.00009793932,0.98991054,0.00009091962,0.000089113724,0.0061544883],"study_design_scores_gemma":[0.00034036257,0.017515963,0.008723767,0.000022623737,0.00007634703,0.00034922015,0.00006011138,0.0016150587,0.96974677,0.00009291393,0.0014489441,0.000008030236],"about_ca_topic_score_codex":0.00037442957,"about_ca_topic_score_gemma":0.0007714557,"teacher_disagreement_score":0.0007924009,"about_ca_system_score_codex":0.00017777566,"about_ca_system_score_gemma":0.00031835993,"threshold_uncertainty_score":0.0026509166},"labels":[],"label_agreement":null},{"id":"W1980009243","doi":"10.1371/journal.ppat.1003298","title":"Systems Analysis of a RIG-I Agonist Inducing Broad Spectrum Inhibition of Virus Infectivity","year":2013,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":119,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Armand Frappier Museum; Institut National de la Recherche Scientifique; Jewish General Hospital; McGill University","funders":"National Institute on Drug Abuse; Canadian Institutes of Health Research","keywords":"Infectivity; Agonist; Virology; Virus; Broad spectrum; Chemistry; Biology; Receptor; Biochemistry; Combinatorial chemistry","score_opus":0.015049075034694964,"score_gpt":0.2265469620319177,"score_spread":0.21149788699722274,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980009243","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9448729,0.0016956216,0.040383756,0.0002111738,0.000066709305,0.00025002527,0.0039284956,0.0005787263,0.00801267],"genre_scores_gemma":[0.98394436,0.0006720217,0.0117461495,0.000037110953,0.0000061543683,0.00017101625,0.0021002872,0.00001974157,0.00130317],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997713,0.000058672933,0.000014118912,0.000050118415,0.00007171351,0.00003414824],"domain_scores_gemma":[0.999884,0.000050706836,0.000019433905,0.000012075373,0.000024925608,0.000008857815],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002934162,0.00045378655,0.0005201158,0.00024626407,0.00026029363,0.0006264467,0.0003619025,0.00030343275,0.0017333893],"category_scores_gemma":[0.0003108057,0.00017169313,0.00064590835,0.00021650236,0.00014540197,0.00022787116,0.0003091272,0.0004324954,0.0003893317],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00082051667,0.00035634497,0.0023545632,0.0010057879,0.00012977383,0.00029826953,0.000089018045,0.09545808,0.88435906,0.004128088,0.0008091099,0.0101914685],"study_design_scores_gemma":[0.000079616446,0.001782234,0.003307745,0.000026778263,0.00010962943,0.00010879185,0.000109148925,0.45243677,0.5357424,0.0013469614,0.00490875,0.000041170988],"about_ca_topic_score_codex":0.0020291167,"about_ca_topic_score_gemma":0.00224393,"teacher_disagreement_score":0.0020291167,"about_ca_system_score_codex":0.000706237,"about_ca_system_score_gemma":0.00046312198,"threshold_uncertainty_score":0.005798757},"labels":[],"label_agreement":null},{"id":"W1980652850","doi":"10.1073/pnas.0611559104","title":"Role of IFN regulatory factor 5 transcription factor in antiviral immunity and tumor suppression","year":2007,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":208,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research","funders":"Japan Society for the Promotion of Science; Ministry of Education, Culture, Sports, Science and Technology; Uehara Memorial Foundation","keywords":"IRF5; Interferon regulatory factors; Biology; Transcription factor; Immunology; Proinflammatory cytokine; Immune system; Immunity; Cancer research; IRF8; IRF1; Innate immune system; Gene; Inflammation; Genetics","score_opus":0.024922404464845605,"score_gpt":0.28594228087090956,"score_spread":0.26101987640606394,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980652850","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86029744,0.104739666,0.021466782,0.001041212,0.00019509826,0.000036042085,0.00023963008,0.00017039946,0.0118138185],"genre_scores_gemma":[0.9877175,0.006237998,0.0036391977,0.00014113897,0.000033095275,0.000007749145,0.00019192355,0.0000059990266,0.002025454],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984,0.00003991843,0.000011870442,0.000034522578,0.000036322508,0.000037191323],"domain_scores_gemma":[0.99991584,0.000015111477,0.00002773048,0.0000084070025,0.000007080581,0.000025796351],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030666206,0.00039049253,0.00018240488,0.00024329085,0.00016406573,0.00032557672,0.00021442803,0.00038829164,0.0010119418],"category_scores_gemma":[0.00015948266,0.000064535314,0.00021020956,0.00008469765,0.00034933398,0.00032257487,0.00024534258,0.00039011377,0.00026060626],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043844598,0.00004310325,0.002128461,0.00014633352,0.000018921792,0.00048400325,0.00003866087,0.0003130036,0.96947193,0.003942121,0.00014018214,0.022834674],"study_design_scores_gemma":[0.00005283599,0.00077156967,0.020346384,0.000121422396,0.00007936773,0.0032472245,0.00016542367,0.0032546795,0.9427105,0.00424767,0.024984617,0.00001826689],"about_ca_topic_score_codex":0.0002058254,"about_ca_topic_score_gemma":0.00022477483,"teacher_disagreement_score":0.0010119418,"about_ca_system_score_codex":0.0004696216,"about_ca_system_score_gemma":0.00022926308,"threshold_uncertainty_score":0.0034073591},"labels":[],"label_agreement":null},{"id":"W1981113808","doi":"10.1158/1538-7445.am2012-5648","title":"Abstract 5648: Low MEOX2 expression is a feature of stem-like Rat BTUC glioma cell line and contributes to its profound resistance to oncolytic herpes virus infection","year":2012,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Oncolytic virus; Glioma; Biology; Cancer research; Cell culture; Lytic cycle; Stem cell; Neurosphere; U87; Cancer stem cell; BMI1; Neural stem cell; Nestin; Virology; Virus; Cellular differentiation; Adult stem cell; Cell biology; Gene; Tumor cells; Genetics","score_opus":0.0436538154239017,"score_gpt":0.36914373557191715,"score_spread":0.3254899201480155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981113808","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9845408,0.0014643753,0.004184605,0.00021694346,0.000047612542,0.000029423116,0.0030348697,0.00030025947,0.006181155],"genre_scores_gemma":[0.98205835,0.00049116823,0.0016482037,0.000055712906,0.000013042001,0.0000537263,0.0043326495,0.00006839042,0.011278767],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998853,0.000007271964,0.00001042084,0.000023731829,0.00004191788,0.000031352945],"domain_scores_gemma":[0.99992704,0.0000078196435,0.000015739544,0.000010016586,0.000013114159,0.0000262854],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000058952588,0.00035083102,0.00022613727,0.0003008991,0.00018024613,0.00023792005,0.00016854794,0.00025365915,0.004368523],"category_scores_gemma":[0.000055624874,0.00009236651,0.0001760881,0.00026377797,0.00016639412,0.00015771166,0.00017535457,0.00045890658,0.0011373173],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039781993,0.000010551428,0.0001895357,0.000011367554,0.0000018979416,0.00005613955,0.000010431733,0.000012174027,0.9990251,0.00006709286,0.00007185105,0.0005041081],"study_design_scores_gemma":[0.000008880128,0.0001530659,0.011432717,0.0000038798144,0.0000085943,0.00075686665,0.000041059102,0.00032474368,0.9814912,0.000059685855,0.005714331,0.0000051054135],"about_ca_topic_score_codex":0.002140577,"about_ca_topic_score_gemma":0.0012327707,"teacher_disagreement_score":0.004368523,"about_ca_system_score_codex":0.00021510464,"about_ca_system_score_gemma":0.0001224837,"threshold_uncertainty_score":0.014614105},"labels":[],"label_agreement":null},{"id":"W1981221946","doi":"10.1089/jir.2007.0054","title":"Cigarette Smoke Suppresses Type I Interferon-Mediated Antiviral Immunity in Lung Fibroblast and Epithelial Cells","year":2008,"lang":"en","type":"article","venue":"Journal of Interferon & Cytokine Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"Canadian Institutes of Health Research; Philip Morris International","keywords":"STAT1; Interferon; Biology; Sendai virus; Innate immune system; Transcription factor; ISG15; Immunology; Immune system; Virus; Gene; Biochemistry","score_opus":0.043695402927147464,"score_gpt":0.3230542885143026,"score_spread":0.27935888558715516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981221946","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99206525,0.0053355587,0.0008229321,0.00009596763,0.000040614912,0.000028037746,0.00019993572,0.000032700547,0.0013790474],"genre_scores_gemma":[0.9926657,0.0031577954,0.0011917662,0.00013337599,0.000025738465,0.000046382378,0.00047539623,0.0000119322185,0.0022917648],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997644,0.0000781584,0.00002208694,0.00002178231,0.00006732935,0.00004625074],"domain_scores_gemma":[0.99985564,0.000044741042,0.000026136497,0.000027151309,0.000024040646,0.000022277942],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023467354,0.0003324502,0.00035213886,0.00019454824,0.00015133733,0.0002523582,0.00014058343,0.00030236252,0.00096590596],"category_scores_gemma":[0.00015811596,0.0001481711,0.00030417566,0.0001330833,0.0001607333,0.00015263104,0.00018542774,0.00038774696,0.00038696342],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015760481,0.00006272722,0.00044302392,0.000037045043,0.0000051256234,0.000057643694,0.000016292026,0.000020863448,0.99769753,0.000030296473,0.000029751345,0.0014420644],"study_design_scores_gemma":[0.000043326192,0.0013942014,0.01733127,0.000013816923,0.000028629547,0.00042206602,0.000086127526,0.0006827041,0.97750676,0.000058885926,0.0024257817,0.0000063345533],"about_ca_topic_score_codex":0.00078691385,"about_ca_topic_score_gemma":0.0013660718,"teacher_disagreement_score":0.00096590596,"about_ca_system_score_codex":0.00015360999,"about_ca_system_score_gemma":0.00021175286,"threshold_uncertainty_score":0.0032312274},"labels":[],"label_agreement":null},{"id":"W1981274274","doi":"10.1016/j.dci.2013.04.010","title":"Defense genes missing from the flight division","year":2013,"lang":"en","type":"review","venue":"Developmental & Comparative Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":170,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; MHC class I; Virology; Gene; RIG-I; Genetics; Major histocompatibility complex; Cell biology; RNA","score_opus":0.10015495367169024,"score_gpt":0.3400439298200368,"score_spread":0.23988897614834653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981274274","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00017736947,0.9954786,0.0004888324,0.0006822624,0.001365791,0.0000034380032,0.000041479787,0.000017893703,0.0017443312],"genre_scores_gemma":[0.0011196142,0.99476683,0.00043697705,0.0006756325,0.00092553,0.0000068085255,0.000109177294,0.0000053779904,0.001954063],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998486,0.000015025878,0.000021653861,0.000041621377,0.00005264843,0.000020361524],"domain_scores_gemma":[0.99964774,0.0001275429,0.00005809196,0.000015320153,0.00010088724,0.00005041094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005123148,0.0011668642,0.0015101179,0.0012720586,0.00031067122,0.0011904157,0.0012189373,0.0014334059,0.0033408408],"category_scores_gemma":[0.0007048196,0.00040386425,0.00030160218,0.0017764905,0.0011745245,0.0017162919,0.00090516236,0.0024121283,0.0024485106],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001242157,0.000026961572,0.00016786216,0.005873606,0.00004748797,0.00024316378,0.000037566868,0.00034155347,0.0070767975,0.005903662,0.05236998,0.92778724],"study_design_scores_gemma":[0.000011918488,0.000025143187,0.00068255176,0.0010148521,0.000052441745,0.0005925177,0.00004094873,0.00006875099,0.0011022342,0.0028988011,0.9934922,0.000017683897],"about_ca_topic_score_codex":0.0009833327,"about_ca_topic_score_gemma":0.0018690857,"teacher_disagreement_score":0.0033408408,"about_ca_system_score_codex":0.0009863371,"about_ca_system_score_gemma":0.0013131034,"threshold_uncertainty_score":0.0111762285},"labels":[],"label_agreement":null},{"id":"W1981276113","doi":"10.1155/2013/738794","title":"Viruses as Modulators of Mitochondrial Functions","year":2013,"lang":"en","type":"review","venue":"Advances in Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":142,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Mitochondrion; Biology; Cell biology; Mitochondrial DNA; Organelle; mitochondrial fusion; Virus; Function (biology); Mitochondrial membrane transport protein; Virology; Gene; Genetics; Inner mitochondrial membrane","score_opus":0.025645812808493217,"score_gpt":0.34065748434931925,"score_spread":0.31501167154082604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981276113","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002018399,0.9981906,0.00009708168,0.00012637638,0.00017438809,0.000003470738,0.000009228225,0.0000064177684,0.0011905868],"genre_scores_gemma":[0.0011705008,0.9976546,0.00015084418,0.000088032786,0.00016044664,0.0000053659187,0.000024192906,0.0000012307889,0.00074477016],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99989164,0.000016236147,0.000013591397,0.000017431274,0.00004674176,0.000014365373],"domain_scores_gemma":[0.9998981,0.000035005847,0.000017413375,0.0000034781642,0.00003148083,0.000014594877],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024004845,0.0006330932,0.0007823462,0.0016126381,0.000276234,0.0007355427,0.00051306025,0.00077740743,0.0024746961],"category_scores_gemma":[0.00029207568,0.00019917362,0.0002755803,0.0012139572,0.00031493598,0.00096738304,0.00055768894,0.0011802713,0.0018597621],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000071732386,0.00006114404,0.0002457255,0.0089674555,0.000046257144,0.00027834176,0.00008857598,0.00028602607,0.007379503,0.0047601326,0.020498363,0.95731676],"study_design_scores_gemma":[0.000010951532,0.00006865497,0.0007084421,0.0012432259,0.000035359866,0.0015001103,0.00005004482,0.000069348614,0.0015699086,0.0016228971,0.99310803,0.000012980706],"about_ca_topic_score_codex":0.000573776,"about_ca_topic_score_gemma":0.00091736985,"teacher_disagreement_score":0.0024746961,"about_ca_system_score_codex":0.00055446196,"about_ca_system_score_gemma":0.0005605053,"threshold_uncertainty_score":0.008278668},"labels":[],"label_agreement":null},{"id":"W1982194661","doi":"10.1371/journal.ppat.1003124","title":"IFITM Proteins Restrict Viral Membrane Hemifusion","year":2013,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":370,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; National Center for Research Resources; National Institute of General Medical Sciences; Canadian Institutes of Health Research; U.S. Public Health Service; National Institute on Aging; National Institutes of Health; University of Missouri","keywords":"Lipid bilayer fusion; Cell biology; Biology; Viral envelope; Transmembrane protein; Viral entry; Cell fusion; Hemagglutinin (influenza); Membrane curvature; Membrane protein; Retrovirus; Cell membrane; Biophysics; Membrane; Lipid bilayer; Viral replication; Cell; Biochemistry; Virus; Virology; Glycoprotein; Receptor","score_opus":0.01346827660182359,"score_gpt":0.21165415836562912,"score_spread":0.19818588176380553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982194661","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949114,0.00062560674,0.0033217662,0.00004289,0.0000062871623,0.000014350876,0.000115377814,0.000041984324,0.00092044653],"genre_scores_gemma":[0.9967037,0.00033375376,0.0018500332,0.000040784653,0.0000035420587,0.000020957013,0.00026614242,0.000013915082,0.00076718937],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998876,0.000019240046,0.0000077882105,0.00001778243,0.000031360672,0.000036277088],"domain_scores_gemma":[0.99988353,0.00003585112,0.000032467153,0.000017512948,0.00001421326,0.00001644866],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000118786724,0.0002434709,0.00014749813,0.00010799105,0.0001340901,0.00017996278,0.00012478787,0.00023447024,0.0005391059],"category_scores_gemma":[0.00013148099,0.000083455045,0.00021668573,0.00005796405,0.00016684881,0.00015723583,0.00021108401,0.00043293988,0.00025173582],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019400017,0.0000024317517,0.000062916806,0.000005285109,0.000001044713,0.000013649694,0.000006629188,0.00001595458,0.9994912,0.000045368306,0.0000069529374,0.00032913274],"study_design_scores_gemma":[0.0000027873489,0.000057044817,0.0013584616,0.0000017035942,0.000001967724,0.00014195156,0.000011059939,0.0004004665,0.9972619,0.000034822013,0.0007263987,0.0000014146141],"about_ca_topic_score_codex":0.0003694739,"about_ca_topic_score_gemma":0.0002921481,"teacher_disagreement_score":0.0005391059,"about_ca_system_score_codex":0.00023029538,"about_ca_system_score_gemma":0.00012315442,"threshold_uncertainty_score":0.0018034577},"labels":[],"label_agreement":null},{"id":"W1982782912","doi":"10.1038/cr.2008.273","title":"The IKK-related kinases: from innate immunity to oncogenesis","year":2008,"lang":"en","type":"review","venue":"Cell Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":189,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer; Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Biology; IκB kinase; Kinase; Innate immune system; TANK-binding kinase 1; Carcinogenesis; Transcription factor; Cell biology; Signal transduction; MDA5; Cancer research; Immune system; RNA interference; Immunology; Cancer; NF-κB; Genetics; Protein kinase A; MAP kinase kinase kinase; RNA","score_opus":0.12916289119607002,"score_gpt":0.41452859027359307,"score_spread":0.28536569907752307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982782912","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00005888034,0.9971929,0.00029770873,0.0004161285,0.0010576263,0.0000035437163,0.000014149555,0.000010844692,0.0009481447],"genre_scores_gemma":[0.0004859765,0.9964838,0.00032389443,0.0003990723,0.0012278655,0.00000766203,0.000037024478,0.0000023867608,0.001032251],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99978215,0.000027643708,0.00003229212,0.000045987577,0.00008570161,0.000026279033],"domain_scores_gemma":[0.99948186,0.00019968035,0.00007011251,0.000025432988,0.00014141307,0.00008152088],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00092232955,0.0015538284,0.0020274045,0.0020327817,0.00034148787,0.0015955826,0.0018574885,0.0019728774,0.0029027506],"category_scores_gemma":[0.00096235366,0.00042875044,0.00043759987,0.0027317437,0.0013521281,0.003169394,0.0010175572,0.0037177822,0.0043418235],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015424084,0.000063962674,0.00015819188,0.0073052654,0.000060807895,0.00025683787,0.000049187835,0.00041947488,0.0036428734,0.0052300366,0.08182434,0.90083474],"study_design_scores_gemma":[0.000026305855,0.0000393426,0.00030527508,0.0009182456,0.000039238246,0.00091946014,0.000040405237,0.00006558849,0.0004893455,0.0034393778,0.99370205,0.000015372792],"about_ca_topic_score_codex":0.00055910705,"about_ca_topic_score_gemma":0.0010579813,"teacher_disagreement_score":0.0029027506,"about_ca_system_score_codex":0.0010226307,"about_ca_system_score_gemma":0.001007095,"threshold_uncertainty_score":0.0097106695},"labels":[],"label_agreement":null},{"id":"W1982850154","doi":"10.1074/jbc.m102872200","title":"The Role of CDP in the Negative Regulation ofCXCL1 Gene Expression","year":2001,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Cancer Institute; National Institutes of Health; U.S. Department of Veterans Affairs","keywords":"Gene expression; Regulation of gene expression; Gene; Biology; Genetics; Cell biology; Computational biology","score_opus":0.014983192889964858,"score_gpt":0.24763392986175273,"score_spread":0.23265073697178787,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982850154","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9798338,0.011198581,0.0034935544,0.00073729816,0.00012925395,0.000039816943,0.0005562834,0.00011685742,0.0038945456],"genre_scores_gemma":[0.9937185,0.0016186895,0.0012360439,0.00015897362,0.000037810678,0.000044572564,0.0003886359,0.000023233935,0.0027734789],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997662,0.00003977621,0.000013045071,0.000064003514,0.00005619079,0.000060973583],"domain_scores_gemma":[0.99978954,0.000045240755,0.00005051488,0.000020091398,0.000030299549,0.000064289896],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016965323,0.00037183837,0.00019421279,0.00030791239,0.00024217396,0.00043206417,0.00024001548,0.00030340554,0.0014678555],"category_scores_gemma":[0.00027564575,0.00013406595,0.00014136457,0.00011983466,0.00048687807,0.00019966476,0.00031878907,0.00051985163,0.00029272493],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029758865,0.000023336526,0.00091197615,0.00008127959,0.000003299014,0.00038147566,0.000022090408,0.00007364144,0.9939268,0.00033817245,0.00017504899,0.0037651735],"study_design_scores_gemma":[0.00009330995,0.0002116447,0.028672624,0.000029480498,0.000014663017,0.0016779358,0.00006282237,0.0017775218,0.9588062,0.00039814925,0.008245192,0.000010553079],"about_ca_topic_score_codex":0.0007430342,"about_ca_topic_score_gemma":0.00063037494,"teacher_disagreement_score":0.0014678555,"about_ca_system_score_codex":0.000760986,"about_ca_system_score_gemma":0.00039805955,"threshold_uncertainty_score":0.005521357},"labels":[],"label_agreement":null},{"id":"W1983622222","doi":"10.1007/s10620-012-2169-5","title":"Cell-Type Specific Interferon Stimulated Gene Staining in Liver Underlies Response to Interferon Therapy in Chronic HBV Infected Patients","year":2012,"lang":"en","type":"article","venue":"Digestive Diseases and Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto","funders":"Sun Yat-sen University","keywords":"ISG15; Interferon; Interferon-stimulated gene; Immunology; Immunohistochemistry; Biology; Medicine; Gene expression; Hepatitis B virus; Gene; Virology; Virus; Immune system; Innate immune system","score_opus":0.026192368322483606,"score_gpt":0.27810011630135445,"score_spread":0.25190774797887083,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983622222","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995535,0.00010148864,0.00003865698,0.000014186147,0.0000019860204,0.0000026031387,0.000018471335,0.0000016159356,0.00026752645],"genre_scores_gemma":[0.9998159,0.000027947284,0.000027471737,0.000011729615,0.000004833472,0.0000022081601,0.000025165595,0.0000010746494,0.00008366912],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998789,0.00004297235,0.000011230787,0.00002113934,0.000015321577,0.000030384324],"domain_scores_gemma":[0.9994382,0.0002246665,0.0001806765,0.000029172143,0.0000418822,0.00008534952],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020747143,0.00017251908,0.00023715952,0.00051949697,0.0001889199,0.00040756725,0.000121638936,0.0003326988,0.0014409072],"category_scores_gemma":[0.0010933961,0.00016471765,0.00014294506,0.00029551837,0.00026512588,0.00023094162,0.0001403327,0.0003626025,0.00017818566],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018585204,0.000072073206,0.96896553,0.000023164946,0.00002411191,0.0007295798,0.00023397796,0.00006067101,0.024856586,0.000055884702,0.000040675288,0.0030791701],"study_design_scores_gemma":[0.000014524748,0.00026022695,0.9959357,0.000005304126,0.000024204832,0.001078952,0.00023445938,0.00033240934,0.0019459398,0.000059452384,0.00010521191,0.0000036070958],"about_ca_topic_score_codex":0.00045347915,"about_ca_topic_score_gemma":0.00048346224,"teacher_disagreement_score":0.0014409072,"about_ca_system_score_codex":0.00016988665,"about_ca_system_score_gemma":0.000101243604,"threshold_uncertainty_score":0.004820347},"labels":[],"label_agreement":null},{"id":"W1984014561","doi":"10.1074/jbc.m109.087320","title":"Protein Kinase RNA/FADD/Caspase-8 Pathway Mediates the Proapoptotic Activity of the RNA-binding Protein Human Antigen R (HuR)","year":2010,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Cancer Institute; Canadian Institutes of Health Research","keywords":"Protein kinase R; FADD; Cell biology; EIF-2 kinase; RNA-binding protein; Biology; Molecular biology; Protein kinase A; Caspase 8; RNA; Apoptosis; Chemistry; Kinase; Caspase; Cyclin-dependent kinase 2; Programmed cell death; Biochemistry; Gene","score_opus":0.02065307783283985,"score_gpt":0.24982411103984115,"score_spread":0.2291710332070013,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984014561","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98031414,0.006851427,0.006968672,0.00034500204,0.00008778431,0.000032662996,0.0001841373,0.00015636416,0.0050597456],"genre_scores_gemma":[0.9927216,0.0015826296,0.0022939781,0.000045758803,0.000026997872,0.0000191358,0.00019613547,0.000006210844,0.003107592],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998691,0.000023951376,0.0000066060543,0.000025174832,0.000032215503,0.000043036318],"domain_scores_gemma":[0.99993646,0.000010560057,0.000017340397,0.000008801281,0.000011453632,0.000015421425],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013112542,0.00040409414,0.00019364251,0.00020620707,0.00021550432,0.00026461246,0.00012501738,0.00021624674,0.0018997217],"category_scores_gemma":[0.00012647748,0.00009270296,0.00025094647,0.00008147806,0.00021060475,0.00027510832,0.00022316833,0.00041842577,0.00087857054],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014223844,0.000032465636,0.00024897934,0.000065425345,0.000006190399,0.00023114147,0.000020824706,0.0000764116,0.9945379,0.0006018532,0.00012448437,0.003912061],"study_design_scores_gemma":[0.000050964845,0.0003597316,0.006054436,0.000012171449,0.000013599589,0.0012656782,0.000051544062,0.0016593569,0.9839034,0.00067316694,0.0059510767,0.000004734261],"about_ca_topic_score_codex":0.0001376104,"about_ca_topic_score_gemma":0.00021210022,"teacher_disagreement_score":0.0018997217,"about_ca_system_score_codex":0.0003359293,"about_ca_system_score_gemma":0.00019198937,"threshold_uncertainty_score":0.0063551664},"labels":[],"label_agreement":null},{"id":"W1984029360","doi":"10.1074/jbc.m113.479550","title":"DEAF1 Is a Pellino1-interacting Protein Required for Interferon Production by Sendai Virus and Double-stranded RNA*","year":2013,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"Medical Research Council; Canadian Institutes of Health Research; Wellcome Trust","keywords":"IRF3; Sendai virus; MDA5; IRF7; Ubiquitin ligase; Interferon regulatory factors; Biology; Molecular biology; Interferon; TLR3; Transcription factor; Transcription (linguistics); RNA silencing; TANK-binding kinase 1; Cell biology; Phosphorylation; RNA; Virology; Gene; RNA interference; Virus; Ubiquitin; Protein kinase A; Receptor; Toll-like receptor; Biochemistry; Cyclin-dependent kinase 2; Innate immune system","score_opus":0.029923485727704414,"score_gpt":0.27045496941632674,"score_spread":0.24053148368862232,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984029360","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9911573,0.0015079026,0.005294385,0.0001606029,0.000049451228,0.000026589967,0.0005648752,0.00018403471,0.0010547508],"genre_scores_gemma":[0.99246323,0.0004892319,0.0027783304,0.00005424041,0.000013419569,0.00003013632,0.0015933099,0.000047614354,0.0025306009],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989474,0.000010888832,0.0000087576445,0.00003393551,0.000028078526,0.000023542383],"domain_scores_gemma":[0.9998197,0.000030699528,0.000065393535,0.00001254359,0.000010387968,0.00006128788],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009444784,0.00070223195,0.00032295214,0.00028517298,0.0003786767,0.000370639,0.00022770827,0.00038702408,0.0020052313],"category_scores_gemma":[0.00019411299,0.00020841775,0.00032916997,0.0001311343,0.0003027294,0.0002865127,0.0003809611,0.00048785665,0.0009534795],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009822237,0.000008828715,0.00036585948,0.000024675199,0.0000034858667,0.00013266173,0.000007869125,0.000056494104,0.99838936,0.00007046613,0.000038634724,0.0008034536],"study_design_scores_gemma":[0.000014234072,0.00007211045,0.013782729,0.0000058928995,0.0000142221315,0.0009511198,0.00005273475,0.0017309753,0.9800628,0.00009553092,0.0032074393,0.000010202858],"about_ca_topic_score_codex":0.00037292982,"about_ca_topic_score_gemma":0.00050543295,"teacher_disagreement_score":0.0020052313,"about_ca_system_score_codex":0.00060978543,"about_ca_system_score_gemma":0.00018937654,"threshold_uncertainty_score":0.006708145},"labels":[],"label_agreement":null},{"id":"W1984117184","doi":"10.1016/j.chom.2012.05.005","title":"Adenovirus Evasion of Interferon-Mediated Innate Immunity by Direct Antagonism of a Cellular Histone Posttranslational Modification","year":2012,"lang":"en","type":"article","venue":"Cell Host & Microbe","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":122,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; McMaster University; Western University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Histone H2B; Interferon; Histone; Chromatin; Cell biology; Innate immune system; Histone H3; Interferon type I; Virology; Gene; Genetics; Immune system","score_opus":0.015716937722987514,"score_gpt":0.25819793082431747,"score_spread":0.24248099310132995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984117184","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99242616,0.0015336795,0.0032218862,0.00022271843,0.000094343864,0.00002298732,0.00016924033,0.00008355383,0.0022254826],"genre_scores_gemma":[0.99652207,0.0003494308,0.0014267352,0.000042902568,0.000010076182,0.000010736909,0.00013986639,0.00001479557,0.0014834035],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998466,0.000030551106,0.000018772014,0.000023790233,0.000028453582,0.000051853],"domain_scores_gemma":[0.9998241,0.00005954618,0.000033298697,0.00003989203,0.000013233564,0.00003004078],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034163636,0.00037388934,0.000229856,0.00020612412,0.00015361556,0.0003956221,0.00028728845,0.00039205502,0.0014003996],"category_scores_gemma":[0.00020670846,0.00017348227,0.0003177683,0.000097723416,0.0003807195,0.00027105925,0.00020282483,0.0007217341,0.0003076058],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047221116,0.00005395745,0.00021442998,0.000038300004,0.000010095217,0.000055207944,0.000015229185,0.000094662784,0.9962702,0.0006348974,0.0000491039,0.0020917617],"study_design_scores_gemma":[0.000055819186,0.00032090125,0.0013140787,0.0000064953106,0.000016820326,0.00022437712,0.000027189264,0.0008225228,0.99536574,0.00012742761,0.0017130459,0.0000055847695],"about_ca_topic_score_codex":0.00055394636,"about_ca_topic_score_gemma":0.0006970167,"teacher_disagreement_score":0.0014003996,"about_ca_system_score_codex":0.0005277357,"about_ca_system_score_gemma":0.00029500495,"threshold_uncertainty_score":0.0046848655},"labels":[],"label_agreement":null},{"id":"W1984210886","doi":"10.3855/jidc.4187","title":"Antiviral innate immune response of RNA interference","year":2014,"lang":"en","type":"review","venue":"The Journal of Infection in Developing Countries","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; University of Guelph; University of Toronto","funders":"","keywords":"RNA interference; Biology; RNA silencing; Dicer; Gene silencing; Innate immune system; RNA; Small interfering RNA; Small hairpin RNA; RNA-induced silencing complex; Trans-acting siRNA; Argonaute; Gene; DNA-directed RNA interference; Ribonuclease III; Cell biology; Genetics; Immune system","score_opus":0.025786500667348805,"score_gpt":0.3157994760368129,"score_spread":0.29001297536946413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984210886","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.024350224,0.9271598,0.010884874,0.002449101,0.0013473572,0.00008887491,0.00030136615,0.0001868796,0.033231612],"genre_scores_gemma":[0.25848943,0.6919546,0.009677781,0.00361368,0.0014162775,0.00023415906,0.00071828096,0.000038406808,0.033857346],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.999828,0.000043256572,0.000017605076,0.00003214617,0.00005159558,0.000027310425],"domain_scores_gemma":[0.9999424,0.000010674435,0.000015305797,0.0000020957098,0.000021279522,0.000008257032],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021785224,0.00038624086,0.00040780765,0.00031085135,0.00022400485,0.00054350385,0.00024039063,0.00049322826,0.0022083751],"category_scores_gemma":[0.00013608279,0.00008127405,0.00026075638,0.00021123119,0.00027579794,0.00029351917,0.0003391561,0.0007458669,0.00083478313],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003806283,0.00012443295,0.0031021098,0.008067909,0.00014811796,0.002080265,0.00039113607,0.0005534693,0.5131955,0.025761062,0.023466822,0.42272848],"study_design_scores_gemma":[0.000036286998,0.00043816058,0.011176266,0.0011815972,0.00017104621,0.00678763,0.00025594025,0.00086052186,0.09351863,0.0065891505,0.8789403,0.000044450517],"about_ca_topic_score_codex":0.0002289485,"about_ca_topic_score_gemma":0.00022656436,"teacher_disagreement_score":0.0022083751,"about_ca_system_score_codex":0.00046709602,"about_ca_system_score_gemma":0.00039671702,"threshold_uncertainty_score":0.0073877573},"labels":[],"label_agreement":null},{"id":"W1984337734","doi":"10.1038/gene.2014.17","title":"Contribution of increased ISG15, ISGylation and deregulated type I IFN signaling in Usp18 mutant mice during the course of bacterial infections","year":2014,"lang":"en","type":"article","venue":"Genes and Immunity","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal General Hospital; McGill University","funders":"National Heart, Lung, and Blood Institute; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; McGill University","keywords":"ISG15; Biology; Proinflammatory cytokine; Wild type; Interferon; Salmonella; Autophagy; Signal transduction; Microbiology; Interferon type I; Mutant; Cytokine; Immunology; Cancer research; Gene; Cell biology; Inflammation; Genetics; Apoptosis; Ubiquitin; Bacteria","score_opus":0.006523250662495191,"score_gpt":0.22497951928496357,"score_spread":0.2184562686224684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984337734","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99727863,0.0007927949,0.00081481785,0.00012346401,0.00004179963,0.000012674789,0.00050203037,0.00007152701,0.00036228026],"genre_scores_gemma":[0.9952998,0.0005149696,0.0010909467,0.00008051777,0.000022977474,0.00003470842,0.00040879514,0.00008508801,0.0024621324],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996635,0.000039849197,0.000044344393,0.00008350436,0.00006392971,0.00010501789],"domain_scores_gemma":[0.999321,0.000034947563,0.00025848893,0.000049885835,0.000029433175,0.00030625268],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019711471,0.00085305056,0.0006239658,0.000989403,0.00021522648,0.00061752216,0.00033701432,0.0008604624,0.0017558269],"category_scores_gemma":[0.00023915748,0.00053186546,0.00061743363,0.0002355186,0.00096678094,0.000459019,0.00034085513,0.0015879772,0.0003828112],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013460357,0.000055532368,0.0009836436,0.00002651443,0.000014721827,0.00023836219,0.000020728363,0.00007956511,0.9961902,0.00014717666,0.000048681304,0.0008488276],"study_design_scores_gemma":[0.00011910914,0.00077699294,0.05399476,0.000031478423,0.00011815677,0.0016899443,0.00019894558,0.0014839731,0.9394443,0.00051266013,0.0015985689,0.000031013336],"about_ca_topic_score_codex":0.00073301105,"about_ca_topic_score_gemma":0.0011016525,"teacher_disagreement_score":0.0017558269,"about_ca_system_score_codex":0.0004670771,"about_ca_system_score_gemma":0.00031848773,"threshold_uncertainty_score":0.005873859},"labels":[],"label_agreement":null},{"id":"W1984466323","doi":"10.1002/hep.26066","title":"IFITm1 Is a Tight Junction Protein That Inhibits Hepatitis C Virus Entry","year":2012,"lang":"en","type":"article","venue":"Hepatology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":156,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; National Institute on Drug Abuse; National Institutes of Health","keywords":"Tight junction; Virology; Hepatitis a virus; Virus; Medicine; Biology; Cell biology","score_opus":0.020134569076243936,"score_gpt":0.24040797828306756,"score_spread":0.22027340920682362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984466323","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9483545,0.029995864,0.0067827813,0.0011568116,0.00041342966,0.00010242242,0.0006088953,0.00031096613,0.012274233],"genre_scores_gemma":[0.98634017,0.0048464863,0.0034921416,0.00027247125,0.00008345706,0.000055884997,0.0006395882,0.000019204754,0.0042506186],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999181,0.0000115876355,0.000004939566,0.000012023659,0.000025158546,0.000028264914],"domain_scores_gemma":[0.99994946,0.000008949125,0.000015781348,0.0000034159586,0.000008497112,0.000013955311],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012289727,0.00023926584,0.00017919071,0.000111313435,0.00028013298,0.00022319813,0.00020717608,0.00036008438,0.0023265192],"category_scores_gemma":[0.00016299295,0.00005185506,0.00018511541,0.000089412235,0.0001654433,0.00017446364,0.00013652351,0.00042844279,0.0005578128],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031864332,0.00007260093,0.00072173856,0.00016251412,0.000011252359,0.00010906812,0.000015908403,0.0001726873,0.97968996,0.00043670286,0.00084898964,0.017439919],"study_design_scores_gemma":[0.00006075048,0.0011093226,0.0075736796,0.000037765287,0.00002806261,0.0010996427,0.00003976852,0.00131756,0.9633594,0.00014524929,0.025222015,0.000006815781],"about_ca_topic_score_codex":0.0002496799,"about_ca_topic_score_gemma":0.00032261116,"teacher_disagreement_score":0.0023265192,"about_ca_system_score_codex":0.00032805998,"about_ca_system_score_gemma":0.00020893011,"threshold_uncertainty_score":0.0077829957},"labels":[],"label_agreement":null},{"id":"W1985157866","doi":"10.1016/j.dci.2008.01.002","title":"Functional genomic analysis of the response of Atlantic cod (Gadus morhua) spleen to the viral mimic polyriboinosinic polyribocytidylic acid (pIC)","year":2008,"lang":"en","type":"article","venue":"Developmental & Comparative Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":94,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Institute for Marine Biosciences; Memorial University of Newfoundland","funders":"","keywords":"Biology; Suppression subtractive hybridization; Gadus; Gene; Expressed sequence tag; Molecular biology; Interferon; Atlantic cod; Complementary DNA; Immune system; RNA; cDNA library; Virology; Genetics; Fishery; Fish <Actinopterygii>","score_opus":0.038765111793860045,"score_gpt":0.26189326884564557,"score_spread":0.22312815705178551,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985157866","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997246,0.00024470707,0.0008005644,0.000044981807,0.00001530143,0.000008734754,0.00077404745,0.000015117424,0.0008505818],"genre_scores_gemma":[0.99418455,0.00016444799,0.00069429784,0.0001270449,0.00001198811,0.000017276137,0.0022593602,0.00002399659,0.0025170129],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991834,0.00000547261,0.0000034649354,0.000033880304,0.000013995674,0.000024897432],"domain_scores_gemma":[0.99982846,0.00004495127,0.000038485286,0.000016560636,0.000023903442,0.000047529375],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000069595466,0.00023442866,0.00018546451,0.00024771775,0.00016909816,0.00029345648,0.00016004372,0.00020163474,0.0015035943],"category_scores_gemma":[0.00013268871,0.0001589225,0.00032544544,0.00014539086,0.00031180025,0.000085095475,0.0001859949,0.0005449888,0.00041435086],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000087503184,0.000008464997,0.00035960393,0.000010259014,0.000002775358,0.000012268552,0.000011065768,0.000019616424,0.99915016,0.00003403981,0.0000075861085,0.0002965979],"study_design_scores_gemma":[0.00005065442,0.0008869106,0.24183531,0.000014984847,0.00009732408,0.0005378861,0.0002947259,0.0012753608,0.75221515,0.00017680755,0.002597058,0.000017810293],"about_ca_topic_score_codex":0.0020400505,"about_ca_topic_score_gemma":0.0030763904,"teacher_disagreement_score":0.0020400505,"about_ca_system_score_codex":0.0003145819,"about_ca_system_score_gemma":0.00019473104,"threshold_uncertainty_score":0.0050299764},"labels":[],"label_agreement":null},{"id":"W1985497084","doi":"10.1158/1538-7445.am2014-2248","title":"Abstract 2248: The implication of STAT3 degradation and its mitochondrial functions in cellular senescence","year":2014,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Senescence; STAT3; Cell biology; Phosphorylation; DNA damage; Biology; Mitochondrion; Transcription factor; STAT protein; Biochemistry; Gene; DNA","score_opus":0.0504418124512604,"score_gpt":0.3540022770453503,"score_spread":0.3035604645940899,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985497084","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9880718,0.0051380442,0.0025308533,0.00033203728,0.00007153489,0.000015287616,0.00110499,0.00011285175,0.0026226975],"genre_scores_gemma":[0.99505556,0.00080625585,0.00056438736,0.00007817999,0.000009819476,0.000010027234,0.0008398347,0.000011984353,0.0026238689],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993706,0.0000092072605,0.000007220606,0.000010532725,0.000019793057,0.000016144611],"domain_scores_gemma":[0.99991274,0.0000091829215,0.00003396092,0.000007747588,0.000013463938,0.00002284556],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007286997,0.00023079614,0.00011920508,0.0001212814,0.00014931297,0.00021363015,0.00011317047,0.00027034766,0.002727127],"category_scores_gemma":[0.00007799075,0.00006090242,0.00023267065,0.0001311623,0.00013041603,0.00014531118,0.000117983196,0.00044235066,0.0007379456],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023142499,0.000015030409,0.0002654804,0.000042707827,0.0000038973994,0.000056564215,0.0000047240874,0.000048565045,0.99822325,0.00009000339,0.000054665776,0.0009636342],"study_design_scores_gemma":[0.000029359488,0.00032642877,0.015678812,0.000015717234,0.000019575977,0.00072309247,0.000027458465,0.0009603301,0.9784725,0.00018537426,0.0035565745,0.0000046614323],"about_ca_topic_score_codex":0.00029216954,"about_ca_topic_score_gemma":0.00024953854,"teacher_disagreement_score":0.002727127,"about_ca_system_score_codex":0.00020645457,"about_ca_system_score_gemma":0.00018517453,"threshold_uncertainty_score":0.0091231465},"labels":[],"label_agreement":null},{"id":"W1985799363","doi":"10.1016/j.cell.2011.09.027","title":"The Powerstroke and Camshaft of the RIG-I Antiviral RNA Detection Machine","year":2011,"lang":"en","type":"letter","venue":"Cell","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Biology; RIG-I; Innate immune system; RNA silencing; RNA; Interferon; Virology; MDA5; Immune system; Computational biology; RNA interference; Gene; Genetics","score_opus":0.006734770866787518,"score_gpt":0.19323317952807317,"score_spread":0.18649840866128564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985799363","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0077748327,0.021455606,0.0033273594,0.9280019,0.02636055,0.00002811366,0.00010071154,0.00017215956,0.012778785],"genre_scores_gemma":[0.19801997,0.018119471,0.0036537522,0.6713566,0.07307151,0.00019514748,0.000120956356,0.00010478607,0.03535782],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987494,0.00051258184,0.00007056856,0.00017404497,0.0003136555,0.00017975274],"domain_scores_gemma":[0.99804246,0.0012317097,0.0001330593,0.0002562995,0.00011242918,0.00022407135],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019055813,0.00068442704,0.0008143204,0.00032989818,0.001266915,0.0024478247,0.0009893388,0.012708974,0.0041655954],"category_scores_gemma":[0.006620622,0.00044079046,0.0006712612,0.0001792126,0.0051091197,0.0047477633,0.0015543211,0.019298712,0.0030252247],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021240318,0.00014405757,0.0016576964,0.00031072917,0.00007961618,0.009622137,0.0004956882,0.00062726653,0.013273168,0.139235,0.74222773,0.09020294],"study_design_scores_gemma":[0.00052256667,0.00027225216,0.0011361906,0.00019037876,0.000034766832,0.008329539,0.00045307862,0.0025154813,0.013509896,0.23333482,0.73959684,0.00010416645],"about_ca_topic_score_codex":0.0003657221,"about_ca_topic_score_gemma":0.00047463298,"teacher_disagreement_score":0.012708974,"about_ca_system_score_codex":0.00196777,"about_ca_system_score_gemma":0.00066658383,"threshold_uncertainty_score":0.014277279},"labels":[],"label_agreement":null},{"id":"W1985802554","doi":"10.1096/fj.09-129288","title":"Retinoids inhibit measles virus through a type I IFN‐dependent bystander effect","year":2009,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital; McGill University Health Centre","funders":"","keywords":"Bystander effect; Measles virus; Innate immune system; Viral replication; Biology; Interferon; Virology; Virus; U937 cell; Immune system; Cell culture; Measles; Immunology; Vaccination; Genetics","score_opus":0.015379330530865837,"score_gpt":0.26300374045576425,"score_spread":0.2476244099248984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985802554","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98130816,0.010445611,0.003382066,0.0002325634,0.00013213583,0.000074761774,0.00036637497,0.00026730332,0.0037910608],"genre_scores_gemma":[0.98882174,0.0038549541,0.0021175898,0.000073336516,0.00005489101,0.00006884429,0.00031531553,0.00003274324,0.0046605864],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999801,0.000049508268,0.000021226091,0.00003204784,0.00004606675,0.000050194903],"domain_scores_gemma":[0.99985003,0.000041591793,0.000036150086,0.000028002103,0.000019017954,0.000025181245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018942062,0.00042092378,0.00053200487,0.00025578344,0.00014581683,0.00030141705,0.00025808712,0.00037182702,0.0017160141],"category_scores_gemma":[0.00016996394,0.00012594384,0.00033743226,0.00009740468,0.00025649605,0.00019266091,0.0002205193,0.0006785421,0.00057899137],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002442013,0.000040015115,0.0000998553,0.000036088157,0.0000069025577,0.000018963912,0.0000097015345,0.000028017814,0.9973712,0.00005577175,0.00003802186,0.002051241],"study_design_scores_gemma":[0.000031275733,0.0008630857,0.0025518506,0.0000064345445,0.000020224856,0.00009494304,0.00001718258,0.00023610562,0.99384815,0.000049975053,0.0022776357,0.0000031707464],"about_ca_topic_score_codex":0.0004600317,"about_ca_topic_score_gemma":0.00072916516,"teacher_disagreement_score":0.0017160141,"about_ca_system_score_codex":0.00021275869,"about_ca_system_score_gemma":0.00021259446,"threshold_uncertainty_score":0.0057406425},"labels":[],"label_agreement":null},{"id":"W1987105457","doi":"10.1038/ni1465","title":"The NEMO adaptor bridges the nuclear factor-κB and interferon regulatory factor signaling pathways","year":2007,"lang":"en","type":"article","venue":"Nature Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":318,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Terry Fox Research Institute; McGill University","funders":"National Institute of Allergy and Infectious Diseases; National Cancer Institute","keywords":"IRF3; Interferon regulatory factors; Signal transducing adaptor protein; IRF7; Cell biology; IκB kinase; Phosphorylation; Transcription factor; RNA Helicase A; Ectopic expression; TANK-binding kinase 1; Signal transduction; TRIF; Biology; Ultrabithorax; NF-κB; RNA; Helicase; Gene; Protein kinase A; Biochemistry; Innate immune system; Toll-like receptor; Receptor","score_opus":0.009637071630447979,"score_gpt":0.23250348256525796,"score_spread":0.22286641093481,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987105457","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93651205,0.01392575,0.021954011,0.0029058969,0.0007480868,0.00003381405,0.0003394156,0.00044914303,0.023131825],"genre_scores_gemma":[0.9860784,0.0028875144,0.0027061556,0.00031758644,0.00012291994,0.000018798679,0.00030854245,0.00004589811,0.007514214],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997764,0.000028003005,0.000011836838,0.0000359062,0.00007233661,0.0000755032],"domain_scores_gemma":[0.9997795,0.000029625744,0.000052844534,0.0000377032,0.000029609078,0.00007080396],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037964975,0.00028489062,0.00036342425,0.00023890568,0.0006709839,0.001051443,0.0005904965,0.0007090049,0.00306821],"category_scores_gemma":[0.0005417033,0.00022789114,0.0002144487,0.0001757754,0.0005672621,0.0015760545,0.0017007468,0.0010471756,0.0015665286],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009732451,0.00006087413,0.0016516757,0.00017679507,0.000022232614,0.00067839934,0.00012375512,0.0005264779,0.95352536,0.015727203,0.0012795561,0.025254354],"study_design_scores_gemma":[0.0001559689,0.0002536497,0.025573593,0.000134499,0.00006652871,0.0033991016,0.000619291,0.008953146,0.85887325,0.020750333,0.081146955,0.000073771866],"about_ca_topic_score_codex":0.00019461912,"about_ca_topic_score_gemma":0.00031166803,"teacher_disagreement_score":0.00306821,"about_ca_system_score_codex":0.0004447908,"about_ca_system_score_gemma":0.00038407012,"threshold_uncertainty_score":0.010264158},"labels":[],"label_agreement":null},{"id":"W1987247630","doi":"10.1016/j.micinf.2006.02.028","title":"Retinoic acid inducible gene-I and mda-5 are involved in influenza A virus-induced expression of antiviral cytokines","year":2006,"lang":"en","type":"article","venue":"Microbes and Infection","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":91,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences","keywords":"Biology; Gene expression; TLR3; Influenza A virus; Virus; Interferon; RIG-I; Retinoic acid; Interferon-stimulated gene; Gene; Molecular biology; Virology; RNA; Receptor; Innate immune system; Toll-like receptor; Biochemistry","score_opus":0.01502161168904833,"score_gpt":0.2428436015621554,"score_spread":0.22782198987310706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987247630","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96428144,0.01775313,0.01218541,0.00027912488,0.000100109435,0.00007910772,0.0008810777,0.0002055737,0.004234981],"genre_scores_gemma":[0.9898747,0.0017232948,0.0038596094,0.000086053966,0.000020155372,0.000053232743,0.00094410987,0.000019915844,0.0034188668],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99971753,0.000057041543,0.000023621054,0.00004646139,0.000046207395,0.00010909159],"domain_scores_gemma":[0.99980015,0.000035301076,0.00007048049,0.000027666705,0.00002503109,0.0000414743],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023739864,0.00050944363,0.00031381386,0.00036011325,0.00029236038,0.0005535136,0.00024874302,0.00044778534,0.0013775516],"category_scores_gemma":[0.00021951362,0.0003219828,0.00062739674,0.00016277349,0.00032521252,0.00050592364,0.00032742976,0.0009255149,0.0006603823],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036444166,0.000011384529,0.00041119687,0.000035277197,0.0000082504375,0.000096294934,0.000022998214,0.000050981012,0.99760616,0.00028130008,0.00003159849,0.0010801706],"study_design_scores_gemma":[0.000032567725,0.000195529,0.016358357,0.00001763632,0.00004201847,0.00043315475,0.00013433411,0.0009384372,0.9792404,0.00023635264,0.0023636427,0.000007591221],"about_ca_topic_score_codex":0.0006474621,"about_ca_topic_score_gemma":0.00078085065,"teacher_disagreement_score":0.0013775516,"about_ca_system_score_codex":0.0006154009,"about_ca_system_score_gemma":0.00025854472,"threshold_uncertainty_score":0.0046083927},"labels":[],"label_agreement":null},{"id":"W1987311941","doi":"10.1016/j.coi.2011.08.001","title":"Orchestrating the interferon antiviral response through the mitochondrial antiviral signaling (MAVS) adapter","year":2011,"lang":"en","type":"review","venue":"Current Opinion in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":230,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Biology; Interferon; Innate immune system; Cell biology; Signal transducing adaptor protein; Signal transduction; Interferon type I; Mitochondrion; Endoplasmic reticulum; RIG-I; Virology; Immunology; Immune system","score_opus":0.12452675813319386,"score_gpt":0.37156352656148395,"score_spread":0.2470367684282901,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987311941","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012938882,0.99149454,0.0018195305,0.0017382336,0.0012914413,0.000010362513,0.00004675357,0.000057493286,0.0022477235],"genre_scores_gemma":[0.007192275,0.9867091,0.0012992905,0.0009060178,0.0011419666,0.000017265163,0.00014221027,0.000008982497,0.002582883],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998097,0.000024773302,0.000020293077,0.00004018217,0.00006948964,0.000035690227],"domain_scores_gemma":[0.9998154,0.000039007675,0.000055370016,0.000007328661,0.00004182132,0.00004106373],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00060041447,0.0009900932,0.0012767009,0.0006136309,0.00022871353,0.0014175699,0.0011216187,0.0016985679,0.0016010368],"category_scores_gemma":[0.00029642164,0.00023569966,0.0003436666,0.0007338697,0.0007610904,0.002173032,0.001176348,0.0025778813,0.0022706816],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026582484,0.00006595376,0.00037198883,0.005962141,0.000085989406,0.00048445584,0.00007923847,0.0007229546,0.080588326,0.017868398,0.034962337,0.85854226],"study_design_scores_gemma":[0.000053089643,0.00008749781,0.0014554778,0.0007989718,0.000089646426,0.0011042664,0.00011974323,0.00063494104,0.014971261,0.009091477,0.97155625,0.000037368085],"about_ca_topic_score_codex":0.0003011967,"about_ca_topic_score_gemma":0.0006334628,"teacher_disagreement_score":0.0016985679,"about_ca_system_score_codex":0.00091092574,"about_ca_system_score_gemma":0.00075275573,"threshold_uncertainty_score":0.006609261},"labels":[],"label_agreement":null},{"id":"W1988571105","doi":"10.1084/jem.2115insight4","title":"New role identified for LRR-containing proteins in T cell development","year":2014,"lang":"en","type":"letter","venue":"The Journal of Experimental Medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Computational biology; Genetics","score_opus":0.023629394135390593,"score_gpt":0.28241240096663106,"score_spread":0.25878300683124045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988571105","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13507102,0.100653335,0.00774889,0.6368486,0.06524134,0.00011931006,0.0004073868,0.00057016406,0.05333999],"genre_scores_gemma":[0.57788306,0.053904004,0.01243277,0.17363565,0.14088732,0.00019886231,0.0004568539,0.00011332886,0.040488187],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996532,0.000097837714,0.000042898086,0.00005934016,0.00007302612,0.000073652795],"domain_scores_gemma":[0.9992956,0.00039104413,0.000058692123,0.00009051728,0.00007620676,0.00008783382],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00075134286,0.00047564166,0.0006715264,0.0003207343,0.0004581264,0.0012515396,0.00055532454,0.0052523674,0.004273963],"category_scores_gemma":[0.0011923119,0.00017343694,0.00052192376,0.00020202211,0.00091915857,0.0011885449,0.00048752752,0.004810182,0.001372485],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0052082934,0.00065644574,0.00727107,0.0017636114,0.00019004226,0.16578194,0.00062215194,0.00048107983,0.21029477,0.05067383,0.39414668,0.16291012],"study_design_scores_gemma":[0.0007008207,0.0007237305,0.00622352,0.00017765834,0.00017508924,0.08483604,0.00034516302,0.0019277541,0.037785158,0.020023387,0.8470286,0.000053111748],"about_ca_topic_score_codex":0.000077775076,"about_ca_topic_score_gemma":0.00012224124,"teacher_disagreement_score":0.0052523674,"about_ca_system_score_codex":0.0006369083,"about_ca_system_score_gemma":0.00025052953,"threshold_uncertainty_score":0.014297783},"labels":[],"label_agreement":null},{"id":"W1988964092","doi":"10.1016/j.cyto.2008.07.012","title":"Roles of ubiquitination in pattern-recognition receptors and type I interferon receptor signaling","year":2008,"lang":"en","type":"review","venue":"Cytokine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Innate immune system; Ubiquitin; Pattern recognition receptor; Biology; Receptor; Phosphorylation; Signal transduction; Interferon; Cell biology; Immune system; Immune receptor; Immunology; Gene; Genetics","score_opus":0.04045358606593689,"score_gpt":0.29353569478908115,"score_spread":0.25308210872314424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988964092","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00017567158,0.9975999,0.00039480638,0.00027238714,0.00046464446,0.000003720592,0.000016173835,0.00001073975,0.0010619559],"genre_scores_gemma":[0.0011673956,0.9968078,0.0003523337,0.00020868704,0.00048992166,0.0000066824887,0.00004539674,0.0000017405602,0.00092005316],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997429,0.000036014666,0.00003954623,0.000049968712,0.00010014642,0.000031421092],"domain_scores_gemma":[0.9997228,0.00009260421,0.00004495938,0.000015737964,0.000090783375,0.000033133867],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00083217066,0.0012788964,0.002038982,0.0014479154,0.0004371777,0.0017068775,0.0015565308,0.0017981679,0.0020606362],"category_scores_gemma":[0.000602264,0.0004012618,0.00048493344,0.0023032222,0.0009462332,0.0021299953,0.00085720944,0.0020280897,0.0020868073],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020031541,0.00007322842,0.00024326859,0.007918228,0.00010535353,0.00046983728,0.00006129315,0.0007989694,0.0075381654,0.008101544,0.04164211,0.93284774],"study_design_scores_gemma":[0.00002503684,0.0000501826,0.00080914027,0.0008735353,0.00007778188,0.0017102077,0.00007233396,0.00021262628,0.0015102084,0.005939756,0.9886939,0.000025220115],"about_ca_topic_score_codex":0.0006510352,"about_ca_topic_score_gemma":0.001021585,"teacher_disagreement_score":0.0020606362,"about_ca_system_score_codex":0.0010535471,"about_ca_system_score_gemma":0.0008332271,"threshold_uncertainty_score":0.0076439977},"labels":[],"label_agreement":null},{"id":"W1989032379","doi":"10.1038/ng.2933","title":"Gain-of-function mutations in IFIH1 cause a spectrum of human disease phenotypes associated with upregulated type I interferon signaling","year":2014,"lang":"en","type":"article","venue":"Nature Genetics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":591,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster Children's Hospital","funders":"National Heart, Lung, and Blood Institute","keywords":"Interferon; Biology; Downregulation and upregulation; MDA5; Interferon type I; Phenotype; Immune system; Mutant; Mutation; Wild type; Gene; Signal transduction; microRNA; RNA; Genetics; Cancer research; RNA interference","score_opus":0.009976293019380805,"score_gpt":0.25078415807439763,"score_spread":0.24080786505501683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989032379","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99292,0.0007772544,0.002747658,0.00032211124,0.00008370238,0.000035268073,0.0007366537,0.00023708584,0.0021403115],"genre_scores_gemma":[0.9978054,0.00019178305,0.0010794802,0.000067955945,0.000028716953,0.000014534403,0.00026538168,0.000039991322,0.00050678314],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998512,0.000024451794,0.000019906487,0.000038638453,0.000038123893,0.000027639451],"domain_scores_gemma":[0.99968874,0.000095955176,0.00009890458,0.00002912013,0.000012329298,0.00007496145],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016335485,0.0011060906,0.00045486886,0.0006548648,0.00037470722,0.0002628704,0.00032386507,0.00074930117,0.0023458796],"category_scores_gemma":[0.00045827488,0.00019732231,0.00038985335,0.00043565343,0.00077251944,0.00015973393,0.00049728743,0.0006090855,0.0005180528],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00067601836,0.000086383574,0.0065004393,0.00009561699,0.00009336355,0.023923494,0.00012764972,0.0006877612,0.95661885,0.0011898456,0.0013418113,0.0086588],"study_design_scores_gemma":[0.0005490155,0.00091489364,0.19828087,0.00012098389,0.00051401264,0.25491717,0.0004811046,0.0065001487,0.5186376,0.0039582364,0.01498978,0.00013626735],"about_ca_topic_score_codex":0.0005481087,"about_ca_topic_score_gemma":0.0008895234,"teacher_disagreement_score":0.0023458796,"about_ca_system_score_codex":0.00022093263,"about_ca_system_score_gemma":0.00020995014,"threshold_uncertainty_score":0.007847786},"labels":[],"label_agreement":null},{"id":"W1989377506","doi":"10.1016/j.cyto.2008.07.185","title":"143 MARCH1 E3 Ubiquitin ligase in pro-inflammatory cytokine response: What is its role in inflammation regulation?","year":2008,"lang":"en","type":"article","venue":"Cytokine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Ubiquitin ligase; Ubiquitin; Inflammation; Cytokine; Inflammatory response; Immunology; Chemistry; Medicine; Biochemistry; Gene","score_opus":0.01436995940589923,"score_gpt":0.24791425051236374,"score_spread":0.23354429110646452,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989377506","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.71703875,0.23507935,0.008010862,0.021607883,0.0010606917,0.00007601918,0.00087674166,0.00022382608,0.016025795],"genre_scores_gemma":[0.95637,0.028245142,0.0021461542,0.0009272111,0.000404584,0.000039139293,0.00034153985,0.000023700499,0.011502533],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985516,0.000024849865,0.000011527861,0.000027192758,0.000028995637,0.000052198073],"domain_scores_gemma":[0.9998497,0.000013604858,0.00003707942,0.000013380963,0.000035652876,0.000050654737],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052755006,0.00046430665,0.00089188525,0.00025501638,0.0004493698,0.0016534054,0.00059968216,0.0013868364,0.0042158403],"category_scores_gemma":[0.00035287888,0.00018871718,0.00037059622,0.00032742412,0.0006564404,0.001917364,0.00044293588,0.00071494764,0.0013943102],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008693424,0.00042125522,0.014804306,0.0020358772,0.00037043742,0.0033638587,0.0003684594,0.0018034129,0.7334344,0.0282594,0.013905884,0.19253932],"study_design_scores_gemma":[0.00066111825,0.0019831646,0.0962198,0.0007287727,0.000722614,0.017455926,0.0018196475,0.014679888,0.61886466,0.024268825,0.22237614,0.00021946427],"about_ca_topic_score_codex":0.0006384946,"about_ca_topic_score_gemma":0.00065721944,"teacher_disagreement_score":0.0042158403,"about_ca_system_score_codex":0.00091018877,"about_ca_system_score_gemma":0.0005471183,"threshold_uncertainty_score":0.014103353},"labels":[],"label_agreement":null},{"id":"W1989993156","doi":"10.1016/j.str.2005.08.001","title":"IRF-3 Releases Its Inhibitions","year":2005,"lang":"en","type":"letter","venue":"Structure","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Coactivator; Interferon regulatory factors; IRF1; Interferon; Cell biology; Mechanism (biology); Biology; Chemistry; Computational biology; Transcription factor; Genetics; Gene; Physics","score_opus":0.010165707515392962,"score_gpt":0.23112840871932394,"score_spread":0.22096270120393097,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989993156","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.038641233,0.023297904,0.0054418175,0.83186364,0.053155426,0.00010406558,0.00032030084,0.00047577446,0.04669982],"genre_scores_gemma":[0.47247705,0.012650894,0.005133807,0.38712594,0.059240375,0.00028096882,0.00034510795,0.00014206403,0.06260372],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995229,0.00014091712,0.000040613093,0.000042748627,0.00013857584,0.00011425156],"domain_scores_gemma":[0.99933475,0.0003826507,0.000046977664,0.0000982597,0.00006849442,0.00006882232],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00097584823,0.00067204534,0.0007001451,0.0002449917,0.0008082545,0.0012433662,0.00073339354,0.006374579,0.004414598],"category_scores_gemma":[0.0025727432,0.00022150612,0.0008428194,0.00013329285,0.0010820333,0.0007453784,0.0005829408,0.010773391,0.0021075194],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003912123,0.00044103188,0.0022060638,0.00051095913,0.00020358838,0.029702663,0.00028991787,0.0007847804,0.07082303,0.051758103,0.70903814,0.13032964],"study_design_scores_gemma":[0.001561847,0.000606501,0.003261839,0.00020911076,0.00014652402,0.018439598,0.0003305139,0.0033295245,0.10367577,0.037514202,0.8308435,0.00008110893],"about_ca_topic_score_codex":0.00037216305,"about_ca_topic_score_gemma":0.0004808414,"teacher_disagreement_score":0.006374579,"about_ca_system_score_codex":0.0014789138,"about_ca_system_score_gemma":0.00036937,"threshold_uncertainty_score":0.014768243},"labels":[],"label_agreement":null},{"id":"W1990218988","doi":"10.1074/jbc.r700013200","title":"Innate Immunity Minireview Series: Making Biochemical Sense of Nucleic Acid Sensors That Trigger Antiviral Innate Immunity","year":2007,"lang":"en","type":"review","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"TRIF; Interferon regulatory factors; Interferon; Biology; Innate immune system; TLR7; RIG-I; Toll-like receptor; IRF3; MDA5; TLR3; Cell biology; Pattern recognition receptor; Receptor; Virology; RNA; RNA interference; Gene; Biochemistry","score_opus":0.07890291546020997,"score_gpt":0.3389919627229336,"score_spread":0.26008904726272364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990218988","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0014516027,0.62397337,0.0009960686,0.01308319,0.32436097,0.00010962492,0.0005403023,0.000302902,0.035181895],"genre_scores_gemma":[0.0066113565,0.5803368,0.0011004619,0.013073455,0.29388082,0.00012698332,0.0013985367,0.00018651728,0.10328506],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995254,0.000055975644,0.000042046497,0.00009787168,0.00020975548,0.00006890928],"domain_scores_gemma":[0.999191,0.00012534825,0.00006912868,0.000033129545,0.00035468978,0.00022679112],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055448705,0.0012518741,0.0010658305,0.0012145112,0.00049234304,0.001707744,0.0013629359,0.0014959017,0.034062807],"category_scores_gemma":[0.0009780639,0.0003769455,0.0006090649,0.0008031046,0.00042213427,0.0021268274,0.0010088139,0.0027759573,0.020139545],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009835734,0.000068284564,0.00011932173,0.0029271254,0.000050750197,0.00011291941,0.000061132654,0.000093642055,0.0055519934,0.0012687562,0.8841182,0.10552948],"study_design_scores_gemma":[0.0000064985243,0.000039637962,0.0002114421,0.00021932658,0.000021298007,0.00021114266,0.000023711746,0.000020943731,0.00083820237,0.00031184038,0.9980888,0.000007278557],"about_ca_topic_score_codex":0.00036787876,"about_ca_topic_score_gemma":0.00096983183,"teacher_disagreement_score":0.034062807,"about_ca_system_score_codex":0.00082788424,"about_ca_system_score_gemma":0.0009542634,"threshold_uncertainty_score":0.113951445},"labels":[],"label_agreement":null},{"id":"W1991436313","doi":"10.1016/j.it.2014.07.006","title":"Antiviral innate immunity and stress granule responses","year":2014,"lang":"en","type":"review","venue":"Trends in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":234,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"Ministry of Health, Labour and Welfare; Mochida Memorial Foundation for Medical and Pharmaceutical Research; Ministry of Education, Culture, Sports, Science and Technology; Boehringer Ingelheim Japan; Uehara Memorial Foundation; Takeda Science Foundation; Naito Foundation","keywords":"Innate immune system; Immunology; Immunity; Biology; Medicine; Immune system","score_opus":0.03613035745286429,"score_gpt":0.33694279153955203,"score_spread":0.30081243408668773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991436313","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012584157,0.995453,0.00031205674,0.0007416544,0.0015212775,0.0000068651398,0.00002578724,0.00001666562,0.0017968854],"genre_scores_gemma":[0.0007094195,0.9951698,0.00027607978,0.0005376918,0.0012344316,0.0000097058755,0.000052670606,0.0000027573274,0.002007315],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999843,0.00001924409,0.000017849241,0.000031006344,0.00006541526,0.00002341897],"domain_scores_gemma":[0.99974304,0.00007332294,0.000041790106,0.000010116949,0.00007409802,0.000057580433],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006247143,0.0013171855,0.0013432327,0.0011935686,0.00028672203,0.0015128094,0.00095559674,0.0016710018,0.004260534],"category_scores_gemma":[0.00072457304,0.0003096065,0.00030060404,0.0014728493,0.00078763295,0.0019242037,0.0010593246,0.0026264663,0.0031162377],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011712317,0.00004603564,0.0001327426,0.0057354113,0.00004111073,0.00015181993,0.000031786847,0.00025915788,0.0024973054,0.0030593146,0.065483436,0.9224448],"study_design_scores_gemma":[0.000015656326,0.000035403078,0.00051091646,0.0011858698,0.000046506917,0.0004557133,0.000036966943,0.00006922846,0.00033745804,0.0019962196,0.99529785,0.000012198892],"about_ca_topic_score_codex":0.00059282384,"about_ca_topic_score_gemma":0.0012165983,"teacher_disagreement_score":0.004260534,"about_ca_system_score_codex":0.0006259501,"about_ca_system_score_gemma":0.0012661705,"threshold_uncertainty_score":0.014252901},"labels":[],"label_agreement":null},{"id":"W1992035314","doi":"10.1165/rcmb.2014-0311oc","title":"Occlusive Lung Arterial Lesions in Endothelial-Targeted, Fas-Induced Apoptosis Transgenic Mice","year":2015,"lang":"en","type":"article","venue":"American Journal of Respiratory Cell and Molecular Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Ottawa Hospital; University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"Lung; Apoptosis; Endothelial stem cell; Genetically modified mouse; Pathology; Pulmonary hypertension; Endothelium; Transgene; Biology; Endothelial dysfunction; Medicine; Cancer research; Immunology; Internal medicine; Endocrinology; In vitro","score_opus":0.012846915944838565,"score_gpt":0.264742033329715,"score_spread":0.25189511738487647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992035314","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9853866,0.00072809856,0.009206275,0.00031555558,0.000069599555,0.00021071856,0.0011051429,0.00059848465,0.002379559],"genre_scores_gemma":[0.9762912,0.0012899946,0.010405059,0.00018484038,0.00005929415,0.0003808274,0.0014768023,0.00015817897,0.009753781],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995783,0.00007048904,0.000059147635,0.00011526994,0.00009332192,0.00008348801],"domain_scores_gemma":[0.9994221,0.000112300746,0.00022767037,0.000045230212,0.000040261013,0.00015245848],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004058122,0.0007177921,0.00041507967,0.0013816851,0.00042168907,0.00053912186,0.00046086725,0.001106174,0.0025928211],"category_scores_gemma":[0.00032497573,0.00054033677,0.0003582105,0.00035414656,0.0005604877,0.00045803317,0.00031936672,0.0014607975,0.0007213442],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002917884,0.00031452996,0.00037389292,0.00004192157,0.00001065298,0.00039219946,0.00006973951,0.00014053388,0.99573475,0.0005807647,0.0001042045,0.0019450381],"study_design_scores_gemma":[0.00087288034,0.0028269407,0.01191717,0.00008014604,0.00012977315,0.0066331914,0.00014218038,0.007946949,0.9601105,0.0009538172,0.008342848,0.00004367291],"about_ca_topic_score_codex":0.00045259963,"about_ca_topic_score_gemma":0.0007798594,"teacher_disagreement_score":0.0025928211,"about_ca_system_score_codex":0.00049105746,"about_ca_system_score_gemma":0.00023460978,"threshold_uncertainty_score":0.008673906},"labels":[],"label_agreement":null},{"id":"W1992471058","doi":"10.1016/j.molimm.2009.06.004","title":"Molecular characterization of novel interferon gamma receptor 1 isoforms in zebrafish (Danio rerio) and goldfish (Carassius auratus L.)","year":2009,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":69,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Danio; Gene isoform; Zebrafish; Molecular biology; Receptor; Complementary DNA; Gene; Cell biology; Genetics","score_opus":0.006185140409067407,"score_gpt":0.21791300735648048,"score_spread":0.21172786694741308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992471058","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99593604,0.001344534,0.0011852204,0.000120190314,0.000034560515,0.000019367142,0.000433548,0.000015838477,0.0009106695],"genre_scores_gemma":[0.98966295,0.00093601726,0.0024395883,0.00020084112,0.000025908006,0.0000681309,0.0019634,0.000025838965,0.004677215],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999217,0.0000057290067,0.000008146684,0.000025058758,0.000014335286,0.000025128662],"domain_scores_gemma":[0.999798,0.000024668783,0.00007896427,0.000019409117,0.000038233786,0.00004063318],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019414834,0.0002564985,0.00018844943,0.00037953776,0.00021110757,0.0002413676,0.00024063738,0.00029580647,0.0010272063],"category_scores_gemma":[0.00024347322,0.00023896764,0.00039704124,0.000095281175,0.00023597512,0.00024694475,0.0001788976,0.0004374249,0.00046546344],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015243549,0.000008955406,0.0011173963,0.000023315779,0.0000073037963,0.00013838438,0.000034195025,0.000023972218,0.99755377,0.00010745017,0.000044896075,0.00078805623],"study_design_scores_gemma":[0.00028030173,0.0013723978,0.38620546,0.00008717712,0.00029494255,0.0062250057,0.00080648606,0.002585347,0.5844095,0.00069758156,0.016962908,0.0000729599],"about_ca_topic_score_codex":0.0016202372,"about_ca_topic_score_gemma":0.0030343959,"teacher_disagreement_score":0.0016202372,"about_ca_system_score_codex":0.00036841014,"about_ca_system_score_gemma":0.0002458125,"threshold_uncertainty_score":0.003436327},"labels":[],"label_agreement":null},{"id":"W1992517046","doi":"10.1089/hum.2007.179","title":"Overcoming the Innate Immune Response to Small Interfering RNA","year":2008,"lang":"en","type":"review","venue":"Human Gene Therapy","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":281,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Innovative Targeting Solutions (Canada)","funders":"","keywords":"Innate immune system; Small interfering RNA; Immune system; Biology; Immunology; RNA; Medicine; Gene; Genetics","score_opus":0.07675055468076773,"score_gpt":0.32717115211970144,"score_spread":0.2504205974389337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992517046","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0015178941,0.991901,0.0016970652,0.00023501151,0.00021743469,0.000013242445,0.00001405645,0.00004037071,0.0043638996],"genre_scores_gemma":[0.005553015,0.9887291,0.0014925789,0.00028569493,0.00012303251,0.000026295278,0.000041085277,0.000004629006,0.0037446066],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998858,0.000019160543,0.000011008894,0.000016461954,0.000054863038,0.0000127618],"domain_scores_gemma":[0.999923,0.000032137086,0.000012855159,0.000003276073,0.000021656773,0.0000069836788],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027920163,0.0006347631,0.00088534376,0.00072923367,0.0001611183,0.0004428141,0.00054928806,0.0006814,0.0013456938],"category_scores_gemma":[0.00020870213,0.00015335417,0.00023616102,0.0005582596,0.00029950868,0.0004970453,0.00028926015,0.0007662044,0.0019545765],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000657604,0.00007270466,0.000205109,0.009723292,0.0000567615,0.00055185496,0.000093943185,0.0005498702,0.08344406,0.005474552,0.010644574,0.8891175],"study_design_scores_gemma":[0.000019997435,0.00021314024,0.0012058897,0.0008259522,0.00006017403,0.0027357102,0.000060733728,0.00028688126,0.031569835,0.002070626,0.96093124,0.000019802264],"about_ca_topic_score_codex":0.00048731634,"about_ca_topic_score_gemma":0.0007041939,"teacher_disagreement_score":0.0013456938,"about_ca_system_score_codex":0.0004000665,"about_ca_system_score_gemma":0.00036824896,"threshold_uncertainty_score":0.0045018196},"labels":[],"label_agreement":null},{"id":"W1992537390","doi":"10.1371/journal.pone.0050932","title":"Interferon-γ Upregulates Expression of IFP35 Gene in HeLa Cells via Interferon Regulatory Factor-1","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Natural Science Foundation of China; McGill University; Beckman Research Institute, City of Hope","keywords":"HeLa; Interferon regulatory factors; Interferon; IRF1; Gene expression; Gene; Regulation of gene expression; Biology; IRF8; Molecular biology; Cell biology; Cancer research; Chemistry; Virology; Transcription factor; Genetics; Cell culture","score_opus":0.029018686941508966,"score_gpt":0.22124827959992646,"score_spread":0.1922295926584175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992537390","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9786431,0.003919589,0.009629966,0.00028538084,0.00012371018,0.00007982318,0.0020326618,0.00033549877,0.0049502947],"genre_scores_gemma":[0.98560065,0.0014558877,0.0068077357,0.00015149257,0.00003434948,0.00008795815,0.0023805695,0.00003579337,0.0034455552],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990284,0.000010809458,0.000007462414,0.000024973666,0.000024520217,0.00002929049],"domain_scores_gemma":[0.99993694,0.000015190776,0.000015905911,0.000010005334,0.000011036548,0.000010868064],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009335321,0.00032737825,0.00019639451,0.0002604617,0.00023387768,0.00019034889,0.00013670772,0.00025690868,0.0017976861],"category_scores_gemma":[0.00008526434,0.00010890761,0.00036313836,0.00015744167,0.00021251944,0.00016624694,0.00015440592,0.00046800516,0.00074162986],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039392056,0.000010329601,0.00011122282,0.000029754736,0.0000018238044,0.000030053812,0.000015506093,0.000014172568,0.9993388,0.00004164882,0.00004245553,0.00032484534],"study_design_scores_gemma":[0.000009112128,0.00013454485,0.005137399,0.0000139732965,0.000017534148,0.00019612114,0.00004117255,0.0006146102,0.99107224,0.000056827328,0.002700941,0.0000054914535],"about_ca_topic_score_codex":0.0005829372,"about_ca_topic_score_gemma":0.0006435053,"teacher_disagreement_score":0.0017976861,"about_ca_system_score_codex":0.00038602608,"about_ca_system_score_gemma":0.00015618074,"threshold_uncertainty_score":0.0060138106},"labels":[],"label_agreement":null},{"id":"W1993056035","doi":"10.1016/s0006-2952(02)01165-6","title":"Multiple signaling pathways leading to the activation of interferon regulatory factor 3","year":2002,"lang":"en","type":"review","venue":"Biochemical Pharmacology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":146,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital; McGill University","funders":"National Cancer Institute; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; McGill University","keywords":"Kinase; Interferon regulatory factors; Biology; Signal transduction; Interferon; Cell biology; Innate immune system; Mitogen-activated protein kinase; Phosphorylation; p38 mitogen-activated protein kinases; Protein kinase A; Immune system; Virology; Immunology","score_opus":0.07687610267135149,"score_gpt":0.33194116547116087,"score_spread":0.2550650627998094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993056035","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00066225976,0.99023294,0.0021998114,0.0007813297,0.0010886267,0.000018630923,0.000037548954,0.00003978916,0.004939058],"genre_scores_gemma":[0.0027038765,0.9914556,0.0011706479,0.00041793773,0.0005747617,0.000018482284,0.00008093181,0.0000043666114,0.0035734135],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99984443,0.00001993306,0.000018781537,0.000031753338,0.000063088795,0.000022012668],"domain_scores_gemma":[0.99985254,0.00004821497,0.000018997085,0.0000071330774,0.0000502452,0.000022874921],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054304686,0.0013328538,0.0014282356,0.0012206325,0.00033803307,0.0013708025,0.0012781043,0.0011371278,0.0022652142],"category_scores_gemma":[0.00033619074,0.00036117577,0.00034482934,0.0012814556,0.00074612815,0.0013623273,0.0005872633,0.0024857647,0.003232681],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023817054,0.0001236993,0.00018684503,0.0047638128,0.000056028126,0.0008249377,0.00005928499,0.0009662723,0.0332823,0.008993091,0.028122261,0.92238337],"study_design_scores_gemma":[0.000057707453,0.00008939431,0.0008868185,0.00067399326,0.000062644496,0.0019189426,0.00006516525,0.0002964948,0.010921644,0.004936724,0.9800581,0.00003225234],"about_ca_topic_score_codex":0.00070486934,"about_ca_topic_score_gemma":0.0013126307,"teacher_disagreement_score":0.0022652142,"about_ca_system_score_codex":0.001095821,"about_ca_system_score_gemma":0.00086023693,"threshold_uncertainty_score":0.007950723},"labels":[],"label_agreement":null},{"id":"W1993273579","doi":"10.1007/s11095-011-0402-0","title":"O-Linked Glycosylation Leads to Decreased Thermal Stability of Interferon Alpha 2b as Measured by Two Orthogonal Techniques","year":2011,"lang":"en","type":"article","venue":"Pharmaceutical Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Biotechnology Research Institute; University of Ottawa; Health Canada","funders":"Government of Canada","keywords":"Glycosylation; Thermal stability; Alpha (finance); Chemistry; Alpha interferon; Stability (learning theory); Thermal; Pharmaceutical technology; Materials science; Thermodynamics; Chromatography; Interferon; Medicine; Biochemistry; Physics; Organic chemistry; Immunology; Computer science; Surgery","score_opus":0.21079186801990554,"score_gpt":0.44617732884814787,"score_spread":0.23538546082824233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993273579","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99414873,0.00043754972,0.004593474,0.00005479131,0.00002125946,0.000014786058,0.00009638008,0.000022156235,0.00061088457],"genre_scores_gemma":[0.9928226,0.00044672153,0.005044031,0.00009159122,0.000012791097,0.000042934164,0.00038991828,0.000033484706,0.0011159882],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99956113,0.00013829833,0.000039100014,0.000075599404,0.00008464552,0.00010131563],"domain_scores_gemma":[0.99941504,0.00013506769,0.00027155282,0.000069198,0.000054046275,0.000055118762],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046182066,0.0005833116,0.00020349566,0.00019322091,0.00023705844,0.0004024906,0.00023381147,0.00039632688,0.0007465798],"category_scores_gemma":[0.00049187586,0.0002797433,0.0003736246,0.0002756421,0.00052328466,0.00023201536,0.00028446424,0.0008494471,0.00022344576],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019840675,0.000014736501,0.00015666062,0.0000076874985,0.0000045205875,0.000007807248,0.00001599321,0.000030807318,0.9991574,0.000031465464,0.000007909492,0.0003664938],"study_design_scores_gemma":[0.000011778192,0.0001570851,0.0024425588,0.000002896084,0.00001160144,0.000063189465,0.000014405024,0.00029156104,0.99671006,0.000024152605,0.00026507696,0.000005506305],"about_ca_topic_score_codex":0.00038238047,"about_ca_topic_score_gemma":0.0006053789,"teacher_disagreement_score":0.0007465798,"about_ca_system_score_codex":0.0003151925,"about_ca_system_score_gemma":0.00021990787,"threshold_uncertainty_score":0.0024975538},"labels":[],"label_agreement":null},{"id":"W1993778243","doi":"10.1074/jbc.m109.018275","title":"Polo-like Kinase 1 (PLK1) Regulates Interferon (IFN) Induction by MAVS","year":2009,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"PLK1; Cell biology; Nocodazole; Biology; Polo-like kinase; Phosphorylation; IRF3; Kinase; Transcription factor; Biochemistry; Cell cycle; Gene; Cell","score_opus":0.015187369683234595,"score_gpt":0.24498266485555387,"score_spread":0.22979529517231928,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993778243","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927452,0.0038159364,0.0015687576,0.000114471804,0.000029009134,0.000016868433,0.0003978747,0.000067288405,0.0012444601],"genre_scores_gemma":[0.9966054,0.0011417633,0.0005476997,0.00002893115,0.00000779673,0.000015120036,0.0005319117,0.000011745941,0.0011096934],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992967,0.000009482489,0.0000062287104,0.000018984785,0.000010950236,0.000024648843],"domain_scores_gemma":[0.9999418,0.0000075656653,0.00002476115,0.0000042083097,0.0000041137578,0.000017482278],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006697795,0.00042920109,0.00018122514,0.0001835072,0.0002180106,0.00043252407,0.00015354877,0.0002498642,0.0009080548],"category_scores_gemma":[0.00007017111,0.00016288513,0.00028106425,0.00013630043,0.00018446769,0.00027883396,0.0002913642,0.0004483126,0.00054576044],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011760599,0.000011657426,0.00029790646,0.00003548842,0.0000022027161,0.000048711638,0.000008917072,0.00005420682,0.99882346,0.00007252055,0.000020092133,0.0005071906],"study_design_scores_gemma":[0.000025323685,0.000105898434,0.009146062,0.000009485565,0.000012447749,0.0002867048,0.000030651565,0.0011775559,0.98698145,0.00009949575,0.0021192778,0.000005541267],"about_ca_topic_score_codex":0.00023503674,"about_ca_topic_score_gemma":0.00039300867,"teacher_disagreement_score":0.0009080548,"about_ca_system_score_codex":0.0004943098,"about_ca_system_score_gemma":0.00014458252,"threshold_uncertainty_score":0.0035865307},"labels":[],"label_agreement":null},{"id":"W1994034344","doi":"10.1016/j.molcel.2014.06.010","title":"Molecular Imprinting as a Signal-Activation Mechanism of the Viral RNA Sensor RIG-I","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":247,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Biomedical Imaging and Bioengineering; National Institute of General Medical Sciences; National Cancer Institute; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Howard Hughes Medical Institute","keywords":"Biology; Imprinting (psychology); Mechanism (biology); RNA; Cell biology; Computational biology; Virology; Genetics; Gene","score_opus":0.004215756988221338,"score_gpt":0.19941087202406982,"score_spread":0.1951951150358485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994034344","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.947864,0.0041074436,0.03652099,0.0009607694,0.0003125537,0.00004357257,0.00028605814,0.0005050722,0.009399562],"genre_scores_gemma":[0.9947826,0.00049038325,0.0026712436,0.000089871704,0.000029909175,0.000010971443,0.00008784108,0.000029328163,0.001807877],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980897,0.000038698476,0.00000993535,0.00004449981,0.00003983843,0.000058182337],"domain_scores_gemma":[0.99983096,0.000047164383,0.000039066766,0.000039250168,0.000013082982,0.000030408375],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035729853,0.00030020106,0.00027937308,0.00021717242,0.00028391206,0.0008439927,0.0006077141,0.00052401517,0.0018474815],"category_scores_gemma":[0.00040589672,0.00027074877,0.00040115856,0.00011839648,0.0006158078,0.0009824529,0.0005304486,0.00092952483,0.00088941323],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002344521,0.000013708133,0.00029668774,0.000034856403,0.0000071314557,0.00016005698,0.000039228285,0.00042685992,0.9893965,0.007388523,0.00008655227,0.001915528],"study_design_scores_gemma":[0.000021421181,0.00012591487,0.001244985,0.000007154234,0.000012125289,0.00033667262,0.00004467688,0.007471246,0.9862564,0.0029645138,0.0014981068,0.000016870248],"about_ca_topic_score_codex":0.00013228647,"about_ca_topic_score_gemma":0.00013005799,"teacher_disagreement_score":0.0018474815,"about_ca_system_score_codex":0.00045726294,"about_ca_system_score_gemma":0.00021871722,"threshold_uncertainty_score":0.0061804056},"labels":[],"label_agreement":null},{"id":"W1995078506","doi":"10.1016/j.cyto.2012.05.002","title":"CXCL10 contributes to p38-mediated apoptosis in primary T lymphocytes in vitro","year":2012,"lang":"en","type":"article","venue":"Cytokine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"CXCL10; p38 mitogen-activated protein kinases; Cell biology; Apoptosis; MAPK/ERK pathway; Chemokine; CXCR3; PI3K/AKT/mTOR pathway; Biology; Chemotaxis; Lymphocyte; Signal transduction; Immunology; Cancer research; Immune system; Chemokine receptor; Receptor; Biochemistry","score_opus":0.009469951856448906,"score_gpt":0.23175977296037958,"score_spread":0.22228982110393067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995078506","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96522516,0.014953006,0.010759246,0.0005073535,0.00030828163,0.00032711812,0.0014198506,0.0002680567,0.006231988],"genre_scores_gemma":[0.97904414,0.00598821,0.0042556515,0.00028155366,0.00016948416,0.0004636248,0.00232402,0.000042296993,0.007430944],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993999,0.00018664212,0.000043632732,0.000050925555,0.00014155488,0.00017740336],"domain_scores_gemma":[0.9995945,0.00013231856,0.000051639694,0.00006852399,0.00009339484,0.000059604543],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047113776,0.0009624977,0.0006426671,0.00047191244,0.0003192547,0.00047053746,0.00030247294,0.00036257296,0.0054716743],"category_scores_gemma":[0.00039542248,0.00029567958,0.0006365682,0.00027259244,0.00024748594,0.00031265756,0.00041508817,0.0011591988,0.0024951643],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011825865,0.00038212183,0.0004056149,0.0003856845,0.000018473374,0.0002958803,0.00012715209,0.00022225366,0.9907188,0.00015774519,0.00052580476,0.0055779708],"study_design_scores_gemma":[0.000369044,0.0023128567,0.005834958,0.000064924185,0.000061846724,0.0009124981,0.00011114949,0.0026843697,0.97803736,0.00026958567,0.009329982,0.00001150485],"about_ca_topic_score_codex":0.0011278066,"about_ca_topic_score_gemma":0.0013103049,"teacher_disagreement_score":0.0054716743,"about_ca_system_score_codex":0.0005230246,"about_ca_system_score_gemma":0.00042130754,"threshold_uncertainty_score":0.018304586},"labels":[],"label_agreement":null},{"id":"W1995775274","doi":"10.1016/j.cyto.2013.06.001","title":"Novel paradigms of innate immune sensing of viral infections","year":2013,"lang":"en","type":"review","venue":"Cytokine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Innate immune system; Interferon; Biology; Endoplasmic reticulum; Viral replication; Virus; Cell biology; Virology; Signal transduction; Lipid bilayer fusion; Immune system; Immunology","score_opus":0.036692056238349216,"score_gpt":0.30279576246192635,"score_spread":0.26610370622357715,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995775274","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000072841976,0.99796665,0.0002741095,0.0003188134,0.0005256158,0.0000030210042,0.0000072183184,0.000005372006,0.0008264774],"genre_scores_gemma":[0.0005290735,0.99776757,0.00021580979,0.0002481273,0.00075735676,0.0000050771996,0.000016889462,0.0000011633941,0.00045892133],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99977726,0.000036574314,0.00002610411,0.000036911722,0.0000891659,0.0000340146],"domain_scores_gemma":[0.9996828,0.00014166952,0.00003828272,0.000010872268,0.000075329925,0.00005111979],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009359947,0.0012595641,0.0014008684,0.0017738753,0.00035853285,0.001471081,0.0014170625,0.0014887566,0.0019550843],"category_scores_gemma":[0.00076084497,0.00033716953,0.00035889313,0.0016336769,0.001372455,0.0025861005,0.0011801611,0.0031434468,0.0013312573],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016106377,0.00007997033,0.0001501417,0.012726488,0.00006185453,0.00035954628,0.000094998,0.00061131956,0.007162586,0.01603639,0.058503345,0.9040524],"study_design_scores_gemma":[0.000016015663,0.00005125134,0.00028846136,0.0015291525,0.000039134353,0.0008161015,0.00006729573,0.00013494381,0.0007643911,0.0058454843,0.9904304,0.000017352108],"about_ca_topic_score_codex":0.0006801734,"about_ca_topic_score_gemma":0.0014892742,"teacher_disagreement_score":0.0019550843,"about_ca_system_score_codex":0.0010381769,"about_ca_system_score_gemma":0.0013567448,"threshold_uncertainty_score":0.007532537},"labels":[],"label_agreement":null},{"id":"W1996253451","doi":"10.1371/journal.pone.0074875","title":"Fenretinide Corrects the Imbalance between Omega-6 to Omega-3 Polyunsaturated Fatty Acids and Inhibits Macrophage Inflammatory Mediators via the ERK Pathway","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Docosahexaenoic acid; Arachidonic acid; Proinflammatory cytokine; Tumor necrosis factor alpha; Phosphorylation; Inflammation; Biology; Omega 3 fatty acid; Cytokine; Lipid signaling; Interleukin 10; Polyunsaturated fatty acid; Chemistry; Biochemistry; Molecular biology; Immunology; Fatty acid; Enzyme","score_opus":0.013066494372287374,"score_gpt":0.2019815576938434,"score_spread":0.18891506332155603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996253451","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.988487,0.0070909574,0.0023031223,0.00050922186,0.00010487164,0.000046742083,0.00020614432,0.00014181825,0.0011101097],"genre_scores_gemma":[0.990012,0.0038218277,0.0031246706,0.00020961068,0.00004840981,0.000066369015,0.0002542484,0.000034160683,0.0024287952],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997807,0.0000497309,0.000027508364,0.000028117287,0.00005837171,0.000055512537],"domain_scores_gemma":[0.9999176,0.000011073139,0.0000328095,0.000008553444,0.000012479702,0.000017407972],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021262141,0.00044203005,0.0007768395,0.00041455374,0.00020397527,0.00026041924,0.00033241755,0.00038401177,0.00081458664],"category_scores_gemma":[0.00018672558,0.00012674175,0.00039792902,0.00014582573,0.00035565943,0.0002942827,0.0003069727,0.0010983365,0.00017307317],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016232699,0.00018078419,0.0002535306,0.00017228056,0.00004013189,0.00016339392,0.000026403508,0.00012148649,0.98929787,0.000109862376,0.00012779945,0.007883271],"study_design_scores_gemma":[0.00022826168,0.0018097559,0.004678438,0.000029082164,0.000095152085,0.0006503171,0.000109969726,0.0009217053,0.9845317,0.00021488502,0.006715055,0.000015648662],"about_ca_topic_score_codex":0.0005729036,"about_ca_topic_score_gemma":0.00101187,"teacher_disagreement_score":0.00081458664,"about_ca_system_score_codex":0.000247401,"about_ca_system_score_gemma":0.00036343953,"threshold_uncertainty_score":0.0027250648},"labels":[],"label_agreement":null},{"id":"W1997617537","doi":"10.1371/journal.pone.0089284","title":"Positive Regulation of TRAF6-Dependent Innate Immune Responses by Protein Phosphatase PP1-γ","year":2014,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; National Cancer Institute; National Institute of General Medical Sciences; U.S. Public Health Service; National Institute on Aging","keywords":"Innate immune system; Signal transducing adaptor protein; Ubiquitin ligase; Cell biology; Biology; Proinflammatory cytokine; Immune system; Phosphatase; Ubiquitin; Protein phosphatase 1; Protein phosphatase 2; Regulator; Protein subunit; Signal transduction; Phosphorylation; Immunology; Inflammation; Biochemistry","score_opus":0.014519016536217408,"score_gpt":0.21521470294309397,"score_spread":0.20069568640687657,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997617537","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9887671,0.0036103681,0.004935155,0.00018732567,0.00003229835,0.000028578888,0.00036219673,0.00012514094,0.0019519746],"genre_scores_gemma":[0.9962786,0.0011775616,0.001105326,0.00003036528,0.0000068175073,0.00001694173,0.00024298721,0.0000133585245,0.0011280213],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976045,0.000040110972,0.000022702048,0.00005233183,0.00007411456,0.00005029623],"domain_scores_gemma":[0.9998529,0.000027133943,0.000048815444,0.000020931624,0.000019193692,0.000030995503],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026711635,0.00068634213,0.00023740972,0.00029946014,0.00018859217,0.000538724,0.000250218,0.00019375797,0.0010282701],"category_scores_gemma":[0.0002364492,0.0001766838,0.00026343818,0.00016576465,0.0004139052,0.00022644518,0.0003235074,0.0005723071,0.00038598393],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007530524,0.000009093759,0.00027982463,0.000033873624,0.0000036458962,0.00006662925,0.000007593383,0.00005218102,0.998492,0.00013056376,0.000019933017,0.0008292275],"study_design_scores_gemma":[0.000011571373,0.000059708127,0.00465298,0.0000044506523,0.000010279393,0.00036225124,0.000019487616,0.000464891,0.9932712,0.00012863288,0.0010098066,0.0000047686644],"about_ca_topic_score_codex":0.0002759647,"about_ca_topic_score_gemma":0.0003559717,"teacher_disagreement_score":0.0010282701,"about_ca_system_score_codex":0.00037185146,"about_ca_system_score_gemma":0.00021963818,"threshold_uncertainty_score":0.0034399033},"labels":[],"label_agreement":null},{"id":"W1997873455","doi":"10.2217/fvl.10.18","title":"DSRNA and the Innate Antiviral Immune Response","year":2010,"lang":"en","type":"article","venue":"Future Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Innate immune system; Interferon; Biology; RNA silencing; Pattern recognition receptor; Virology; Viral infection; Pathogen; Germline; Immune system; Immunology; RNA; Virus; RNA interference; Genetics; Gene","score_opus":0.003001508830130798,"score_gpt":0.21326683868788357,"score_spread":0.21026532985775276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997873455","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.013645904,0.958364,0.0021089797,0.0068645435,0.00074124057,0.000009539399,0.00004182248,0.0000250469,0.018198974],"genre_scores_gemma":[0.19890171,0.7619164,0.0032856131,0.0037048082,0.0035321182,0.000036944384,0.000117936564,0.000012631906,0.028491816],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999859,0.000051658626,0.000009170159,0.00002350345,0.00003385065,0.000022825036],"domain_scores_gemma":[0.9999194,0.000026608866,0.00001637278,0.000004390105,0.000015357002,0.000017900673],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045169605,0.00023484098,0.00024972443,0.00033414442,0.00022836315,0.0009885235,0.00019866439,0.0009117624,0.0017051754],"category_scores_gemma":[0.00019713801,0.00007452226,0.00008084566,0.00025836777,0.00054191705,0.00088629714,0.00044508706,0.0010055304,0.00073144236],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00077974936,0.00013032288,0.0023655172,0.0016110593,0.000048848153,0.0014501222,0.0006192335,0.0012751744,0.09951137,0.19848533,0.020373495,0.6733497],"study_design_scores_gemma":[0.000032554803,0.00035779152,0.004125073,0.00066450785,0.000023420811,0.0019489351,0.0005764745,0.00060846854,0.015102409,0.100621074,0.87590545,0.000033771827],"about_ca_topic_score_codex":0.00022393715,"about_ca_topic_score_gemma":0.00031690428,"teacher_disagreement_score":0.0017051754,"about_ca_system_score_codex":0.0004609909,"about_ca_system_score_gemma":0.0003540355,"threshold_uncertainty_score":0.0057043433},"labels":[],"label_agreement":null},{"id":"W1998346527","doi":"10.1016/j.jmb.2013.10.022","title":"SAMHD1 Host Restriction Factor: A Link with Innate Immune Sensing of Retrovirus Infection","year":2013,"lang":"en","type":"review","venue":"Journal of Molecular Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research; Pfizer","keywords":"SAMHD1; Biology; Innate immune system; Immune system; Reverse transcriptase; Viral replication; Retrovirus; Virology; Genetics; Cell biology; Virus; RNA; Gene","score_opus":0.02455310000582024,"score_gpt":0.3097018452719923,"score_spread":0.28514874526617207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998346527","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00019956166,0.9981279,0.00023485336,0.00035869275,0.0004155894,0.0000032103708,0.000016986425,0.000008152071,0.00063506176],"genre_scores_gemma":[0.0013453389,0.996795,0.0002964453,0.00021657646,0.0006581293,0.0000058478486,0.000043373453,0.0000016697469,0.0006375904],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998983,0.000012098577,0.000015369305,0.00002061361,0.00003861644,0.000015004402],"domain_scores_gemma":[0.9997874,0.000073672454,0.00004394671,0.000007155259,0.000051907267,0.00003588246],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047565636,0.0008234045,0.0010499031,0.0010738554,0.00020476642,0.00090062554,0.000957814,0.0011159048,0.0019073796],"category_scores_gemma":[0.0003916193,0.0002511542,0.00024976252,0.0011845608,0.00061184855,0.0010931778,0.0006577514,0.0016637713,0.001647671],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017229475,0.000055554472,0.00023406846,0.0072682416,0.00005937171,0.00033343732,0.00003243571,0.0002584574,0.008183996,0.0032360677,0.031461157,0.948705],"study_design_scores_gemma":[0.000028398446,0.00008715229,0.0011070163,0.0013125555,0.000087588065,0.0017789039,0.00004618028,0.00013064231,0.0023475857,0.0023578068,0.99069303,0.000023136572],"about_ca_topic_score_codex":0.00041544426,"about_ca_topic_score_gemma":0.00071315485,"teacher_disagreement_score":0.0019073796,"about_ca_system_score_codex":0.0005756955,"about_ca_system_score_gemma":0.00082789804,"threshold_uncertainty_score":0.0063807964},"labels":[],"label_agreement":null},{"id":"W1999064908","doi":"10.1002/eji.200737181","title":"Synergistic activation of interferon‐β gene transcription by the viral FLICE inhibitory protein of Kaposi's sarcoma‐associated herpesvirus and type I IFN activators","year":2007,"lang":"en","type":"article","venue":"European Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Saint-Luc; Université Laval","funders":"National Cancer Institute; Canadian Institutes of Health Research","keywords":"Biology; Primary effusion lymphoma; Interferon regulatory factors; Interferon; Transcription factor; Flip; Cancer research; Gene; NFKB1; Gene expression; Apoptosis; Cell biology; Virology; Genetics","score_opus":0.010546238943041337,"score_gpt":0.22142057502623508,"score_spread":0.21087433608319375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999064908","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9900517,0.003293029,0.0029422077,0.00007030633,0.00004843567,0.00003491946,0.00012251624,0.00003405945,0.003402814],"genre_scores_gemma":[0.99528366,0.0009227825,0.0021105215,0.00004426913,0.000021275533,0.000038852577,0.00022366238,0.000008123433,0.0013468554],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978095,0.000060241415,0.000015671867,0.000033003842,0.000036858462,0.00007333705],"domain_scores_gemma":[0.99984336,0.000045305842,0.000036166985,0.000019066843,0.000012460651,0.000043589695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019357644,0.00041850674,0.00024079229,0.00018200406,0.00009173932,0.00025829856,0.00009827102,0.00017321631,0.0018399801],"category_scores_gemma":[0.0002225377,0.00014582294,0.0002535571,0.000098338234,0.00021777228,0.00023773091,0.00041792012,0.0004038323,0.0004262804],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032288118,0.000034368506,0.0004598657,0.000050365652,0.000006972544,0.0000915915,0.000015265978,0.0000660841,0.99599504,0.00014261554,0.000028665752,0.0027862769],"study_design_scores_gemma":[0.000042405984,0.00082316104,0.0066805347,0.000022898706,0.000029982864,0.00094014656,0.00007093118,0.0011290676,0.9873465,0.0002278288,0.0026810062,0.000005619753],"about_ca_topic_score_codex":0.000086625696,"about_ca_topic_score_gemma":0.00014407827,"teacher_disagreement_score":0.0018399801,"about_ca_system_score_codex":0.00019768144,"about_ca_system_score_gemma":0.00018298058,"threshold_uncertainty_score":0.006155312},"labels":[],"label_agreement":null},{"id":"W1999586798","doi":"10.1158/1538-7445.am10-237","title":"Abstract 237: A novel proto-oncogene of TRIM59 characterized in mouse cancer models bridging Ras and pRb signal pathways","year":2010,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Western University","funders":"","keywords":"Oncogene; Carcinogenesis; Cancer; Biology; Cancer research; Cell cycle; Genetics","score_opus":0.09670189998950132,"score_gpt":0.3654275415668511,"score_spread":0.2687256415773498,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999586798","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98560405,0.0021876497,0.006196154,0.00031100286,0.00008463247,0.00007358897,0.0017370707,0.00029340014,0.0035125047],"genre_scores_gemma":[0.98214555,0.0010876455,0.0040274616,0.00016495357,0.000019992274,0.00007839117,0.0028536685,0.00009261082,0.00952978],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998307,0.000015275014,0.000015533786,0.00004775202,0.000053007705,0.000037715097],"domain_scores_gemma":[0.99986875,0.000013065896,0.000038263595,0.000015761578,0.000012035801,0.0000520631],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012736228,0.00039547414,0.00024267068,0.000585073,0.0002880089,0.00037140158,0.00029089765,0.0004900535,0.0028232639],"category_scores_gemma":[0.00010430639,0.00016654968,0.0004400935,0.00020183728,0.00025833797,0.00020765448,0.00028845872,0.00073706184,0.0011946635],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000066406006,0.000019833313,0.00011423813,0.000018553406,0.0000031420207,0.00014047204,0.000006056709,0.00002237823,0.998769,0.0001243154,0.000052839223,0.0006628387],"study_design_scores_gemma":[0.000023431521,0.00020579358,0.0022931218,0.000009205813,0.00002084277,0.0013221916,0.000028088396,0.00071031397,0.9910851,0.000088547946,0.0042086653,0.0000048433144],"about_ca_topic_score_codex":0.00052542106,"about_ca_topic_score_gemma":0.00052289275,"teacher_disagreement_score":0.0028232639,"about_ca_system_score_codex":0.0005206892,"about_ca_system_score_gemma":0.0002161956,"threshold_uncertainty_score":0.009444773},"labels":[],"label_agreement":null},{"id":"W1999792663","doi":"10.1002/eji.200838832","title":"Transcriptional re‐programming of primary macrophages reveals distinct apoptotic and anti‐tumoral functions of IRF‐3 and IRF‐7","year":2009,"lang":"en","type":"article","venue":"European Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital; Terry Fox Research Institute","funders":"National Cancer Institute; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Interferon regulatory factors; Cell biology; IRF1; Vesicular stomatitis virus; Regulator; Transcriptional regulation; Apoptosis; Interferon; Cancer research; Transcription factor; Immune system; Innate immune system; Gene; Molecular biology; Immunology; Virus; Genetics","score_opus":0.014218356782416904,"score_gpt":0.2236616521781824,"score_spread":0.2094432953957655,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999792663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99362165,0.0009256899,0.0034282736,0.000071474766,0.000026836364,0.000036063953,0.0003850613,0.00006184976,0.0014430295],"genre_scores_gemma":[0.99527454,0.0004137054,0.00199574,0.00005905083,0.000013829214,0.000048325073,0.0005317143,0.000017967954,0.0016451544],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998252,0.000024805626,0.00000998719,0.000032100066,0.000029519277,0.000078392404],"domain_scores_gemma":[0.9999025,0.00002257792,0.00001604588,0.000016465387,0.000017370461,0.000024991645],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020305083,0.00027331276,0.000228801,0.0002001512,0.00010171205,0.00021342003,0.000119927936,0.00020439988,0.001209107],"category_scores_gemma":[0.00009955187,0.000092223134,0.0003569414,0.000092431364,0.00024238855,0.00012506556,0.00015219896,0.0006899955,0.0005283361],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019349098,0.000024158675,0.00016685884,0.000020214591,0.0000018347541,0.000028194914,0.000015122929,0.000020349076,0.99869436,0.00006353089,0.000013589513,0.0007584022],"study_design_scores_gemma":[0.000017028815,0.000325586,0.0033352582,0.0000052115447,0.000011257698,0.00013792912,0.0000425615,0.0003647385,0.9948013,0.000055358825,0.0009013089,0.0000023578073],"about_ca_topic_score_codex":0.00020490098,"about_ca_topic_score_gemma":0.0002890341,"teacher_disagreement_score":0.001209107,"about_ca_system_score_codex":0.00019477544,"about_ca_system_score_gemma":0.00017426662,"threshold_uncertainty_score":0.0040448904},"labels":[],"label_agreement":null},{"id":"W2001469393","doi":"10.1128/jvi.00998-10","title":"Differential Regulation of Human Papillomavirus Type 8 by Interferon Regulatory Factors 3 and 7","year":2010,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital","funders":"Universität des Saarlandes; Deutsche Forschungsgemeinschaft","keywords":"Epidermodysplasia verruciformis; Biology; Innate immune system; Transcription factor; IRF1; Transcription (linguistics); Effector; Interferon; Cancer research; Cell biology; Immunology; Immune system; Virus; Gene; Genetics","score_opus":0.008916694743819757,"score_gpt":0.25001485977558136,"score_spread":0.2410981650317616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001469393","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947031,0.0019053414,0.0016446576,0.000045924968,0.000030635718,0.000018956178,0.00017189712,0.0000285892,0.0014508025],"genre_scores_gemma":[0.9974463,0.0007635369,0.0006269313,0.000038534563,0.000007666725,0.000017306107,0.0002361992,0.000005445042,0.0008581742],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985826,0.000032620803,0.000009627684,0.000021503432,0.000032833224,0.000045188324],"domain_scores_gemma":[0.99991715,0.000024719957,0.00001371118,0.000011000487,0.00001901787,0.000014308015],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000119612836,0.0002073508,0.0001368872,0.00019100704,0.00010756187,0.00022739974,0.00008214618,0.00019723993,0.0010778388],"category_scores_gemma":[0.00013045172,0.00008347208,0.00038156228,0.00006710005,0.00012644238,0.00016482497,0.00015101011,0.0002796521,0.00033150136],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011105709,0.000015943147,0.0009891455,0.000029993951,0.0000041899075,0.000061535255,0.000028352402,0.000015694268,0.99721706,0.000073642295,0.000023925695,0.0014295913],"study_design_scores_gemma":[0.000010685051,0.00030250128,0.032520518,0.000016917922,0.000025768404,0.00066150504,0.00016017776,0.0004583818,0.96372974,0.00018214765,0.0019258137,0.000005892293],"about_ca_topic_score_codex":0.00019514648,"about_ca_topic_score_gemma":0.00020744116,"teacher_disagreement_score":0.0010778388,"about_ca_system_score_codex":0.00011713203,"about_ca_system_score_gemma":0.000102571015,"threshold_uncertainty_score":0.0036057234},"labels":[],"label_agreement":null},{"id":"W2001978551","doi":"10.1007/s11033-004-6613-2","title":"Intracellular localization and domain organization of human TRIM41proteins","year":2005,"lang":"en","type":"article","venue":"Molecular Biology Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saint Paul University","funders":"National Institutes of Health","keywords":"Green fluorescent protein; Nuclear localization sequence; Complementary DNA; Gene isoform; Gene; Cytoplasm; Biology; Fusion protein; Protein subcellular localization prediction; Amino acid; Signal peptide; Nuclear transport; Peptide sequence; Nucleus; Nuclear protein; Molecular biology; Cell biology; Cell nucleus; Genetics; Transcription factor; Recombinant DNA","score_opus":0.004304626502271592,"score_gpt":0.23642772507311707,"score_spread":0.23212309857084548,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001978551","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942966,0.0015824912,0.001871151,0.00008648266,0.000015207483,0.000009482807,0.000361166,0.000031070605,0.001746469],"genre_scores_gemma":[0.9914049,0.0008367311,0.0022239198,0.00010427741,0.000020523163,0.000027117921,0.0022079267,0.000025072133,0.0031494624],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989927,0.000017095981,0.0000093502595,0.000030770832,0.000016641668,0.000026889522],"domain_scores_gemma":[0.9997738,0.000055070755,0.000040495448,0.000051625066,0.000036905927,0.00004199779],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014722117,0.00024097075,0.0002044223,0.00035479554,0.00047282132,0.00036196082,0.00022027301,0.0003649225,0.0011357297],"category_scores_gemma":[0.00025766547,0.00020783019,0.0003687645,0.0003234433,0.00023992693,0.00029645298,0.00027419077,0.00045844878,0.0008601271],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037894567,0.000020277012,0.0008070447,0.00004347035,0.000009909519,0.0002091023,0.000101759346,0.00015853446,0.9957366,0.00047210048,0.00014645494,0.0019158704],"study_design_scores_gemma":[0.000040888644,0.0002635546,0.07472345,0.000029015413,0.000074596275,0.0025631583,0.00047487376,0.0029318477,0.9067444,0.0008627598,0.011261308,0.000030255218],"about_ca_topic_score_codex":0.00068520167,"about_ca_topic_score_gemma":0.0005486787,"teacher_disagreement_score":0.0011357297,"about_ca_system_score_codex":0.00057995104,"about_ca_system_score_gemma":0.00017491337,"threshold_uncertainty_score":0.0042078495},"labels":[],"label_agreement":null},{"id":"W2002258333","doi":"10.1016/j.jhep.2015.02.037","title":"The oral toll-like receptor-7 agonist GS-9620 in patients with chronic hepatitis B virus infection","year":2015,"lang":"en","type":"article","venue":"Journal of Hepatology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":185,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Alberta","funders":"","keywords":"Toll-like receptor; Toll; Agonist; Medicine; Chronic hepatitis; Virus; Virology; Receptor; Immunology; Internal medicine; Innate immune system","score_opus":0.010801887460113815,"score_gpt":0.2371742110639319,"score_spread":0.2263723236038181,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002258333","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954276,0.00278341,0.0000557385,0.00027781207,0.000042557236,0.00001476253,0.00008553366,0.0000071292425,0.0013053643],"genre_scores_gemma":[0.9988444,0.0005878354,0.0000536374,0.00015807545,0.000048819296,0.000009151755,0.000094405565,0.0000013479645,0.00020232218],"study_design_codex":"observational","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.999754,0.00009369738,0.00003345015,0.000029887167,0.00003124183,0.00005768797],"domain_scores_gemma":[0.99952435,0.00019047121,0.0000973267,0.000014796083,0.000033494623,0.0001395045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003889209,0.00035065328,0.0009129385,0.00035653225,0.0005596448,0.00052895333,0.00018687893,0.0006530132,0.0012967694],"category_scores_gemma":[0.0013417867,0.00025422694,0.00047845978,0.000479763,0.0002660978,0.0005161062,0.0002832313,0.00080734974,0.00015744721],"study_design_candidate":"nonrandomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.017076269,0.00062726234,0.9410997,0.00024038627,0.00027254142,0.002481402,0.000247985,0.00022608704,0.0030009293,0.000075753,0.0008219786,0.03382975],"study_design_scores_gemma":[0.0010530653,0.005670585,0.9855369,0.00012577527,0.00054335047,0.0031895812,0.0008273747,0.0009169245,0.0004817727,0.00015052553,0.001475223,0.000028996701],"about_ca_topic_score_codex":0.0018266663,"about_ca_topic_score_gemma":0.003314153,"teacher_disagreement_score":0.0018266663,"about_ca_system_score_codex":0.00032694935,"about_ca_system_score_gemma":0.00044067536,"threshold_uncertainty_score":0.0043380857},"labels":[],"label_agreement":null},{"id":"W2002398153","doi":"10.2217/fmb.10.27","title":"Rubella Virus Capsid Protein: A Small Protein with Big Functions","year":2010,"lang":"en","type":"review","venue":"Future Microbiology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Alberta Heritage Foundation for Medical Research","keywords":"Biology; Capsid; Virus; Virology; Viral replication; Genome; RNA; Rubella virus; RNA virus; DNA virus; Cell biology; Gene; Genetics; Rubella","score_opus":0.019366810082787424,"score_gpt":0.23989378128080466,"score_spread":0.22052697119801723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002398153","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005697218,0.9955903,0.0005500305,0.00022652773,0.00028086046,0.0000071189866,0.000030098283,0.00003191905,0.0027134158],"genre_scores_gemma":[0.0042088646,0.98951703,0.00088318775,0.0002187673,0.00027578505,0.000014655503,0.00015294908,0.000009148912,0.0047196094],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998741,0.000011323514,0.000012618723,0.00003317338,0.000054645694,0.000014107375],"domain_scores_gemma":[0.9998779,0.000029360292,0.000029504567,0.0000054191564,0.000030779447,0.000026990661],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026483333,0.0010637738,0.001097791,0.0014098596,0.000256421,0.0009167866,0.0008223311,0.0009411092,0.0016119343],"category_scores_gemma":[0.00023091696,0.0002259515,0.00024016015,0.0013232864,0.00069179334,0.0010885763,0.00046746325,0.0012283243,0.003977522],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000065998545,0.000051812935,0.0002157981,0.005443191,0.000034138196,0.00031493566,0.00005318093,0.00024956194,0.025841733,0.0028990621,0.02132182,0.94350874],"study_design_scores_gemma":[0.0000104671,0.000056776124,0.00090994925,0.00044179775,0.00002744349,0.0023609356,0.000030810024,0.00007644297,0.0050923987,0.000987853,0.9899894,0.000015785461],"about_ca_topic_score_codex":0.0008667079,"about_ca_topic_score_gemma":0.00067151233,"teacher_disagreement_score":0.0016119343,"about_ca_system_score_codex":0.0006811302,"about_ca_system_score_gemma":0.0005872852,"threshold_uncertainty_score":0.005392492},"labels":[],"label_agreement":null},{"id":"W2002532850","doi":"10.1016/j.virol.2009.02.013","title":"Myxoma virus selectively disrupts type I interferon signaling in primary human fibroblasts by blocking the activation of the Janus kinase Tyk2","year":2009,"lang":"en","type":"article","venue":"Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Biology; Janus kinase 1; STAT1; Janus kinase; Tyrosine kinase 2; Interferon; JAK-STAT signaling pathway; Signal transduction; Cell biology; Myxoma virus; Phosphorylation; Interferon type I; Tyrosine phosphorylation; STAT2; Cytostasis; Virology; STAT protein; Tyrosine kinase; Receptor; Virus; STAT3; Biochemistry; Platelet-derived growth factor receptor","score_opus":0.008974971560658464,"score_gpt":0.23913926686507211,"score_spread":0.23016429530441365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002532850","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99578345,0.0011512543,0.001127785,0.00009367605,0.000060184277,0.000016110442,0.0001604914,0.00003900365,0.0015680189],"genre_scores_gemma":[0.9978283,0.00032174733,0.000544771,0.000020565794,0.000009512298,0.00001314422,0.00009040126,0.000007758412,0.0011636375],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984264,0.000028164866,0.000015419773,0.000029671924,0.000034502194,0.00004967596],"domain_scores_gemma":[0.99991,0.000032937223,0.00001984043,0.00001513741,0.000004005632,0.000018070792],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015737413,0.0002683746,0.00021056579,0.0001388474,0.0002058146,0.00039142952,0.00018291867,0.00026158357,0.0010154394],"category_scores_gemma":[0.000115305615,0.00017215313,0.00020272603,0.00008256091,0.00021456712,0.00014479429,0.00013075658,0.0006057243,0.00030097913],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007383819,0.000016976159,0.00007545216,0.000012516062,0.0000032670596,0.00005368821,0.00001120174,0.00003831574,0.9991824,0.00014895198,0.00002988937,0.00035356532],"study_design_scores_gemma":[0.000025020026,0.000207442,0.0014065951,0.0000030128076,0.000012788074,0.0003175502,0.000026074933,0.0006433959,0.9957033,0.000052851745,0.0015990278,0.0000029795083],"about_ca_topic_score_codex":0.0007579041,"about_ca_topic_score_gemma":0.001104817,"teacher_disagreement_score":0.0010154394,"about_ca_system_score_codex":0.0002764851,"about_ca_system_score_gemma":0.00018654832,"threshold_uncertainty_score":0.0033969283},"labels":[],"label_agreement":null},{"id":"W2002934916","doi":"10.1016/j.str.2010.12.015","title":"Interferon-Inducible Protein 16: Insight into the Interaction with Tumor Suppressor p53","year":2011,"lang":"en","type":"article","venue":"Structure","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":93,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; University Health Network; University of Toronto; Ontario Institute for Cancer Research","funders":"Canadian Institutes of Health Research; National Institute of General Medical Sciences; Wellcome Trust","keywords":"Transcription (linguistics); Suppressor; DNA; Transcriptional regulation; Cell biology; DNA-binding domain; Transcription factor; Biology; DNA-binding protein; HMG-box; Molecular biology; Chemistry; Genetics; Gene","score_opus":0.013731187687293915,"score_gpt":0.22616970432094333,"score_spread":0.2124385166336494,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002934916","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9517279,0.026979163,0.011571254,0.0019198084,0.00013297115,0.00001593866,0.00015438757,0.00006158092,0.007436969],"genre_scores_gemma":[0.9854623,0.007782084,0.0032189724,0.00016316077,0.000055948207,0.000008250897,0.00013871105,0.000011051033,0.0031595053],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99996996,0.0000063843436,0.0000010910164,0.000005335606,0.000008215519,0.000009050992],"domain_scores_gemma":[0.99996316,0.00001051971,0.000010258132,0.000003658211,0.0000031948073,0.000009196619],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001731879,0.0002914156,0.00023106804,0.0001720888,0.00020737769,0.0003302012,0.0003375769,0.00034433266,0.001036934],"category_scores_gemma":[0.00015061551,0.00012524826,0.00016188936,0.00011924772,0.00042139212,0.0006573382,0.00022461802,0.0005923341,0.00034670334],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004800975,0.000051459338,0.001534499,0.00014516925,0.000014871072,0.0009427863,0.000071132905,0.0018051253,0.9707671,0.010762466,0.00039813854,0.013027136],"study_design_scores_gemma":[0.00008996115,0.00066638994,0.017826729,0.00009589995,0.00008282639,0.003911114,0.00032775252,0.023638632,0.87819827,0.032219216,0.04289425,0.00004888188],"about_ca_topic_score_codex":0.00018664564,"about_ca_topic_score_gemma":0.00022462168,"teacher_disagreement_score":0.001036934,"about_ca_system_score_codex":0.00038073564,"about_ca_system_score_gemma":0.00016779588,"threshold_uncertainty_score":0.0034689307},"labels":[],"label_agreement":null},{"id":"W2003154276","doi":"10.1371/journal.pone.0114854","title":"Deficiency in Either 4E-BP1 or 4E-BP2 Augments Innate Antiviral Immune Responses","year":2014,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; University of Ottawa; Children's Hospital of Eastern Ontario; Wilfrid Laurier University; McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Cancer Research Society; Agencia Nacional de Investigación e Innovación","keywords":"Innate immune system; Biology; Vesicular stomatitis virus; Sindbis virus; Virology; Viral replication; Virus; Intrinsic immunity; Immunity; Gene silencing; Immune system; Cell biology; Immunology; RNA; Genetics; Gene","score_opus":0.03619387154406122,"score_gpt":0.253529751424052,"score_spread":0.21733587987999076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003154276","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923636,0.0018198726,0.0031469553,0.00010719328,0.000051295723,0.000021034504,0.0006992954,0.00015900611,0.0016317512],"genre_scores_gemma":[0.99144405,0.0010435401,0.0025638582,0.000042890177,0.00001769785,0.000029147533,0.0008410973,0.000040967712,0.00397666],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980193,0.00002794572,0.000023722268,0.000044845514,0.00006440508,0.00003718615],"domain_scores_gemma":[0.9998161,0.000037134967,0.000052685795,0.000027303848,0.000014306651,0.00005244552],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017300635,0.0007405109,0.00036530974,0.00033176443,0.00014079835,0.00035868122,0.0001862311,0.00033923564,0.00204121],"category_scores_gemma":[0.00013242985,0.0001932714,0.00027584948,0.00012823066,0.0002296468,0.00022297501,0.0002847573,0.0006526227,0.0006227698],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033242104,0.000007775001,0.00006520603,0.000014213966,0.0000023249802,0.000015540341,0.0000023258608,0.000029994242,0.99948704,0.000022761864,0.000009847811,0.00030969406],"study_design_scores_gemma":[0.000008058734,0.00012537367,0.0030348478,0.0000041339927,0.000012594343,0.00018300046,0.000010490882,0.0004359416,0.9945903,0.00003079143,0.0015604396,0.0000041461294],"about_ca_topic_score_codex":0.00028171935,"about_ca_topic_score_gemma":0.000445357,"teacher_disagreement_score":0.00204121,"about_ca_system_score_codex":0.00020174685,"about_ca_system_score_gemma":0.00017020071,"threshold_uncertainty_score":0.0068285465},"labels":[],"label_agreement":null},{"id":"W2003861253","doi":"10.1371/journal.ppat.1002747","title":"Proteomic Profiling of the TRAF3 Interactome Network Reveals a New Role for the ER-to-Golgi Transport Compartments in Innate Immunity","year":2012,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer; University of Toronto; Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute; Université de Montréal","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Cell biology; Golgi apparatus; Biology; IRF3; Signal transducing adaptor protein; Innate immune system; Interactome; COPII; COPI; Vesicular transport protein; Signal transduction; Receptor; Secretory pathway; Endoplasmic reticulum; Genetics; Gene","score_opus":0.02938956380130407,"score_gpt":0.2668591795510347,"score_spread":0.23746961574973066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003861253","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98227155,0.005116839,0.007313163,0.00025436713,0.000029171164,0.000030012945,0.0034747943,0.00013248522,0.0013776454],"genre_scores_gemma":[0.98110354,0.0035600201,0.006004312,0.0001366904,0.000020879175,0.000044604174,0.0063668545,0.000037402166,0.0027255327],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998871,0.000009333432,0.000008661617,0.000033879573,0.000034328725,0.00002667231],"domain_scores_gemma":[0.99994373,0.000004701151,0.00001677764,0.000004755751,0.000015237658,0.00001472519],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000121639285,0.0004280405,0.00025078427,0.0006678859,0.00033697078,0.000511438,0.00017650196,0.00032367182,0.0013916687],"category_scores_gemma":[0.00011484145,0.000113435395,0.00044086968,0.0005100017,0.0001122006,0.0003928242,0.00027950818,0.00041303862,0.00057632],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021780815,0.000015755099,0.0015605605,0.000099783,0.00003117033,0.00011075919,0.000021902846,0.00007166567,0.9950848,0.00011607785,0.00008492591,0.0025847186],"study_design_scores_gemma":[0.00003913735,0.0002477998,0.18957184,0.00007433002,0.00023478134,0.002943407,0.00033966172,0.007703737,0.7816689,0.0008981217,0.016235951,0.000042358228],"about_ca_topic_score_codex":0.0005918973,"about_ca_topic_score_gemma":0.0009588813,"teacher_disagreement_score":0.0013916687,"about_ca_system_score_codex":0.0003491108,"about_ca_system_score_gemma":0.0002536091,"threshold_uncertainty_score":0.004655659},"labels":[],"label_agreement":null},{"id":"W2004049581","doi":"10.1080/10425170701606177","title":"Human interferon regulatory factor-1 gene and its promoter sequences revealed by population-based complete gene sequencing","year":2008,"lang":"en","type":"article","venue":"DNA sequence","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; University of Manitoba","funders":"National Institute of Allergy and Infectious Diseases","keywords":"GenBank; Biology; Genetics; Gene; Accession number (library science); Sequence (biology); Regulatory sequence; Nucleic acid sequence; Population; DNA sequencing; Consensus sequence; IRF1; Regulation of gene expression; Transcription factor; Peptide sequence","score_opus":0.053755631861103464,"score_gpt":0.2706371134088204,"score_spread":0.21688148154771694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004049581","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97719234,0.0011399573,0.016533006,0.00005693533,0.000014782717,0.00009350042,0.003430645,0.000042849355,0.0014959668],"genre_scores_gemma":[0.9541399,0.0010466146,0.031749792,0.000111100286,0.00003291735,0.00013766262,0.01162194,0.000039821065,0.0011202599],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99982613,0.00003924747,0.000013061988,0.000063895495,0.000037668695,0.000020000713],"domain_scores_gemma":[0.999703,0.00011791842,0.000044569922,0.00004440319,0.00006791586,0.000022105793],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034667176,0.00013826357,0.00023308115,0.0005104155,0.00015935453,0.00019770689,0.00019475147,0.00021765084,0.0010530123],"category_scores_gemma":[0.0009402618,0.00013379137,0.00029751562,0.0004781776,0.0001683828,0.000094726194,0.000117399395,0.00035406873,0.00052691734],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013390167,0.00010815075,0.035995405,0.00018657125,0.00009778492,0.0009311777,0.000685604,0.00095677236,0.91712695,0.00054673495,0.00032423556,0.04170162],"study_design_scores_gemma":[0.00020240991,0.0018669125,0.6555778,0.00019673831,0.00072602596,0.010205841,0.0005739792,0.009354645,0.28368533,0.0012732525,0.036273435,0.000063703126],"about_ca_topic_score_codex":0.00081667077,"about_ca_topic_score_gemma":0.0012119146,"teacher_disagreement_score":0.0010530123,"about_ca_system_score_codex":0.00013958575,"about_ca_system_score_gemma":0.00020766795,"threshold_uncertainty_score":0.0035226345},"labels":[],"label_agreement":null},{"id":"W2004064281","doi":"10.1371/journal.ppat.1000650","title":"The E3 Ubiquitin Ligase Triad3A Negatively Regulates the RIG-I/MAVS Signaling Pathway by Targeting TRAF3 for Degradation","year":2009,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":171,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Terry Fox Research Institute; McGill University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Canadian Foundation for AIDS Research","keywords":"Ubiquitin ligase; Biology; Signal transducing adaptor protein; Ubiquitin; RIG-I; Cell biology; Signal transduction; Innate immune system; TRIF; Receptor; Toll-like receptor; Gene; Genetics","score_opus":0.01736062499220283,"score_gpt":0.23675362494593372,"score_spread":0.21939299995373088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004064281","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97574085,0.007866383,0.012002691,0.00031826264,0.00012202681,0.000057116555,0.0010450489,0.00037999003,0.0024675482],"genre_scores_gemma":[0.99338925,0.0010233106,0.0026221971,0.00006892394,0.000013108115,0.0000306539,0.0006188618,0.000024096296,0.0022095228],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99969256,0.00005416016,0.000031701315,0.00006606989,0.00007825452,0.00007718896],"domain_scores_gemma":[0.99983966,0.00001428967,0.000061903964,0.000025072886,0.000024608975,0.000034523553],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021947637,0.0005138027,0.00033735312,0.00032950245,0.00033805388,0.0004599837,0.00026320995,0.0002969585,0.0014622952],"category_scores_gemma":[0.000115982475,0.00015891522,0.0007094716,0.00028590884,0.0003795656,0.00030009774,0.0003391794,0.00067423517,0.0009893107],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001313669,0.000023578365,0.00035907756,0.000048069825,0.000011114319,0.000066643704,0.000007857196,0.000059464433,0.99778324,0.00013377138,0.000082069055,0.0012938929],"study_design_scores_gemma":[0.000017058346,0.00011502943,0.0044634347,0.0000046455502,0.000013512909,0.00059925136,0.000019754125,0.0012661373,0.9900945,0.00011583911,0.0032834997,0.0000072847342],"about_ca_topic_score_codex":0.00046290996,"about_ca_topic_score_gemma":0.0005558737,"teacher_disagreement_score":0.0014622952,"about_ca_system_score_codex":0.0005485472,"about_ca_system_score_gemma":0.00028640236,"threshold_uncertainty_score":0.004891813},"labels":[],"label_agreement":null},{"id":"W2004550639","doi":"10.1159/000134588","title":"Comparative genomic hybridization analysis of Y79 and FISH mapping indicate the amplified human mitochondrial ATP synthase α-subunit gene (ATP5A) maps to chromosome 18q12→q21","year":2008,"lang":"en","type":"article","venue":"Cytogenetics and Cell Genetics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; Ontario Institute for Cancer Research; Alberta Cancer Foundation; University of Alberta","funders":"","keywords":"Biology; Molecular biology; Pseudogene; Fluorescence in situ hybridization; Gene; Gene duplication; Chromosome; Chromosome 17 (human); Comparative genomic hybridization; Genetics; Metaphase; Genome","score_opus":0.03806246132889941,"score_gpt":0.2556279710295812,"score_spread":0.21756550970068178,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004550639","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96955407,0.0018208225,0.017632272,0.00016192868,0.000038987688,0.000070603644,0.0006802729,0.000096696465,0.009944407],"genre_scores_gemma":[0.9615826,0.001996195,0.022788815,0.000109859524,0.000018760687,0.00013203375,0.0021368419,0.000068703965,0.011166222],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986327,0.000013771271,0.000007616411,0.000053919073,0.00003246012,0.000029017836],"domain_scores_gemma":[0.9998876,0.000037183196,0.00002371168,0.000018207878,0.000017294218,0.000016059937],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010938293,0.00028426226,0.00023736355,0.0004780632,0.00036178972,0.00016026577,0.00027900442,0.00033430028,0.0061167455],"category_scores_gemma":[0.00022584744,0.00018732512,0.00036153302,0.00036713463,0.00034267953,0.00017117707,0.00033895602,0.00024974727,0.0017808065],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000094417526,0.000011925737,0.0013068477,0.000021226193,0.000012457178,0.0004461032,0.000058461424,0.00008096155,0.99330807,0.00025331258,0.000050755363,0.004355486],"study_design_scores_gemma":[0.00008797109,0.0006568457,0.09251155,0.00002696706,0.00009080151,0.0075395936,0.00025927255,0.0011295212,0.871383,0.0007087296,0.025589993,0.000015767475],"about_ca_topic_score_codex":0.0020756875,"about_ca_topic_score_gemma":0.0037221275,"teacher_disagreement_score":0.0061167455,"about_ca_system_score_codex":0.00025540765,"about_ca_system_score_gemma":0.00019744897,"threshold_uncertainty_score":0.020462573},"labels":[],"label_agreement":null},{"id":"W2004580525","doi":"10.1089/jir.2004.24.687","title":"Diversity and Relatedness Among the Type I Interferons","year":2004,"lang":"en","type":"article","venue":"Journal of Interferon & Cytokine Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Biology; Gene; Genetics; Peptide sequence; Intron; Consensus sequence; Transcription factor; Signal peptide; Molecular biology","score_opus":0.05819922926070871,"score_gpt":0.33098138726691306,"score_spread":0.27278215800620437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004580525","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98584694,0.0056174216,0.0037221669,0.00012149145,0.00001577105,0.000015622,0.00042240732,0.000031598083,0.004206702],"genre_scores_gemma":[0.9901625,0.0032559393,0.0042302236,0.00010660675,0.000035502602,0.000018491848,0.0011267092,0.000014503681,0.001049456],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996094,0.000087568944,0.000027621829,0.0001192622,0.000090901296,0.00006519847],"domain_scores_gemma":[0.9996264,0.000099663535,0.00010388373,0.00003880989,0.00007895576,0.000052193343],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025002865,0.0001061705,0.0002933161,0.0009449355,0.00049277005,0.0005064819,0.00012863026,0.00024870815,0.0006931409],"category_scores_gemma":[0.0006570707,0.00010424871,0.0001905212,0.0008410761,0.00026438048,0.00026295087,0.0003313415,0.00039711787,0.000424027],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00090684457,0.000066167755,0.2894932,0.00039880196,0.00022357573,0.0005767455,0.0015136548,0.0011078895,0.60061026,0.004993216,0.0005812202,0.09952839],"study_design_scores_gemma":[0.00003195402,0.0005107076,0.9003774,0.00017140308,0.00029187027,0.0043678973,0.0013069975,0.0022563883,0.02957237,0.0077386396,0.0533188,0.0000555927],"about_ca_topic_score_codex":0.00035919895,"about_ca_topic_score_gemma":0.00038291124,"teacher_disagreement_score":0.0009449355,"about_ca_system_score_codex":0.00022612866,"about_ca_system_score_gemma":0.00023301072,"threshold_uncertainty_score":0.0023187995},"labels":[],"label_agreement":null},{"id":"W2004897341","doi":"10.1074/jbc.m510326200","title":"Negative Regulation of the Retinoic Acid-inducible Gene I-induced Antiviral State by the Ubiquitin-editing Protein A20","year":2005,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":210,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Terry Fox Research Institute","funders":"National Cancer Institute; Canadian Institutes of Health Research; Cancer Research Society","keywords":"IRF3; Ubiquitin ligase; TRIF; Biology; IRF7; Zinc finger; Interferon regulatory factors; Ubiquitin; Interferon; Cell biology; Molecular biology; Transcription factor; Innate immune system; Gene; Biochemistry; Receptor; Virology; Toll-like receptor","score_opus":0.019788986176566756,"score_gpt":0.2454208048893183,"score_spread":0.22563181871275156,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004897341","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964139,0.0011378257,0.0013734853,0.0000329786,0.000014063019,0.000011325642,0.000092030066,0.00004311964,0.0008813087],"genre_scores_gemma":[0.998187,0.0003384812,0.0006939873,0.000015649837,0.000003833472,0.000009925648,0.00014076315,0.000010918358,0.0005995147],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998746,0.000029266097,0.000013734021,0.000023196164,0.000026280637,0.000033022392],"domain_scores_gemma":[0.9998233,0.000036635418,0.000054846474,0.000024601226,0.00001857292,0.00004210442],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014972557,0.000317841,0.00017648345,0.00016799086,0.00012970081,0.00030400086,0.00016059006,0.00018233496,0.00092109834],"category_scores_gemma":[0.00013246584,0.00010241972,0.00020349119,0.00008611259,0.00024847683,0.00019195276,0.00018107436,0.00027469447,0.00038559502],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000074805335,0.000013755689,0.000081459555,0.000009458484,0.0000026645978,0.00002297453,0.0000032554653,0.000023917746,0.9993388,0.000070305956,0.0000073346396,0.00035120774],"study_design_scores_gemma":[0.000015161837,0.00015147451,0.0019090507,0.0000029190596,0.000007922698,0.00020543479,0.000011066348,0.0009727077,0.99559647,0.00006103744,0.0010631692,0.000003536798],"about_ca_topic_score_codex":0.00023228185,"about_ca_topic_score_gemma":0.00019845991,"teacher_disagreement_score":0.00092109834,"about_ca_system_score_codex":0.00027421323,"about_ca_system_score_gemma":0.00015326764,"threshold_uncertainty_score":0.0030813813},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high"},{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"medium"}],"label_agreement":"agree"},{"id":"W2004904115","doi":"10.1177/0883073814562252","title":"Early-Onset Aicardi-Goutières Syndrome","year":2014,"lang":"en","type":"article","venue":"Journal of Child Neurology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"National Institute of Neurological Disorders and Stroke; U.S. Public Health Service; National Institutes of Health; European Commission; Children's National Hospital","keywords":"Medicine; Microangiopathy; Leukodystrophy; Magnetic resonance imaging; Atrophy; Pathology; Cerebral atrophy; Radiology; Disease","score_opus":0.004739897198105243,"score_gpt":0.20734806076496048,"score_spread":0.20260816356685524,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004904115","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9925568,0.0036166478,0.0010973506,0.00014003755,0.000019815649,0.000017047509,0.00010998373,0.00004279225,0.002399629],"genre_scores_gemma":[0.99716574,0.0013692883,0.00089923356,0.0000805322,0.00001940789,0.000005577608,0.00010587313,0.0000046338264,0.00034979227],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.9998227,0.000040730516,0.000024804427,0.000032344407,0.000050191495,0.000029303983],"domain_scores_gemma":[0.9994832,0.00024268741,0.00016156895,0.000020202948,0.000045484347,0.000046795707],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026287767,0.00033586734,0.0003133158,0.0008628749,0.00021710432,0.00024823862,0.00016721706,0.00032967277,0.0007303123],"category_scores_gemma":[0.0018074397,0.0000859991,0.00014313575,0.00048697394,0.00029224364,0.00018150806,0.0001416994,0.00023404522,0.00015608531],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023973754,0.000029698575,0.8858904,0.00015857082,0.000057155277,0.06599971,0.0003660009,0.0002606325,0.015839128,0.00029675092,0.0006766201,0.03018552],"study_design_scores_gemma":[0.000016249667,0.00016238801,0.6256755,0.0001192995,0.000059980972,0.36427277,0.00024069783,0.000606852,0.005537143,0.00029541302,0.0030019418,0.000011725748],"about_ca_topic_score_codex":0.0013050211,"about_ca_topic_score_gemma":0.0016731317,"teacher_disagreement_score":0.0013050211,"about_ca_system_score_codex":0.0001552788,"about_ca_system_score_gemma":0.0001987955,"threshold_uncertainty_score":0.0025948882},"labels":[],"label_agreement":null},{"id":"W2005018860","doi":"10.1371/journal.ppat.1002247","title":"Vaccinia Virus Protein C6 Is a Virulence Factor that Binds TBK-1 Adaptor Proteins and Inhibits Activation of IRF3 and IRF7","year":2011,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":175,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Science Foundation Ireland; Wellcome Trust; McGill University","keywords":"IRF3; IRF7; Interferon regulatory factors; TANK-binding kinase 1; Biology; Innate immune system; Signal transducing adaptor protein; Cell biology; Pattern recognition receptor; IκB kinase; Interferon; Vaccinia; Signal transduction; Virology; Kinase; Molecular biology; Protein kinase A; NF-κB; Immune system; MAP kinase kinase kinase; Immunology; Biochemistry; Gene","score_opus":0.050107401435034726,"score_gpt":0.2244745218861845,"score_spread":0.17436712045114977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005018860","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9880294,0.0044665886,0.004404423,0.000103826984,0.00006125179,0.000049608887,0.0005716102,0.00010495053,0.002208337],"genre_scores_gemma":[0.9909217,0.0011812971,0.003825487,0.00005683479,0.000019458343,0.00003200529,0.0015293523,0.000023096582,0.0024106863],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985373,0.0000185093,0.000011069876,0.000029097673,0.000044135948,0.00004344108],"domain_scores_gemma":[0.999918,0.0000122710035,0.000022269262,0.000010005564,0.0000105232775,0.000026906931],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008391902,0.0004552866,0.00026281376,0.00022078166,0.00020903432,0.00020674472,0.00018337305,0.00030485413,0.0012026718],"category_scores_gemma":[0.0001154088,0.00010485788,0.00037537634,0.00017254129,0.0001627485,0.000108072956,0.00014301337,0.0003668327,0.0004678988],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012112013,0.000027491988,0.00023359722,0.00004282085,0.000008949463,0.000033666354,0.0000034654615,0.000065740554,0.9981608,0.000061040955,0.000050101185,0.0011912441],"study_design_scores_gemma":[0.00002765742,0.0003123078,0.0044417507,0.000005440743,0.000016890961,0.0006354421,0.000007185877,0.00084637187,0.98962337,0.000038219358,0.0040404554,0.000004960769],"about_ca_topic_score_codex":0.00079089974,"about_ca_topic_score_gemma":0.00068684603,"teacher_disagreement_score":0.0012026718,"about_ca_system_score_codex":0.0003320438,"about_ca_system_score_gemma":0.0001979657,"threshold_uncertainty_score":0.0040233135},"labels":[],"label_agreement":null},{"id":"W2005036996","doi":"10.1371/journal.pone.0022323","title":"RIG-I Is Required for the Inhibition of Measles Virus by Retinoids","year":2011,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; McGill University Health Centre; McGill University; Jewish General Hospital","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research","keywords":"Retinoid; RIG-I; Biology; Measles virus; Retinoic acid; Cell biology; Cancer research; Molecular biology; Virology; RNA; Gene; Measles; Biochemistry","score_opus":0.07516344164019437,"score_gpt":0.23546449214170895,"score_spread":0.16030105050151458,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005036996","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96951866,0.008654968,0.010490275,0.0005566542,0.00021669974,0.00011107943,0.0030211387,0.000681472,0.00674899],"genre_scores_gemma":[0.9895639,0.0011043946,0.002996115,0.00009808371,0.000021292512,0.00006621351,0.0020710777,0.00007853794,0.004000386],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999438,0.00010877398,0.00007933635,0.000087634544,0.00014556455,0.00014061076],"domain_scores_gemma":[0.99958605,0.00007539192,0.000115269846,0.000097949705,0.00004873344,0.000076692086],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003108573,0.00056450575,0.00044198122,0.00038734317,0.00033934225,0.00067370944,0.0004034475,0.0005939671,0.0031447024],"category_scores_gemma":[0.00038038864,0.0003683922,0.00092151354,0.00017635542,0.00041924708,0.00039382308,0.00053770596,0.0010356106,0.0028750382],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008104675,0.000012943129,0.00012911562,0.000029891511,0.0000053409044,0.000048128004,0.000009784981,0.000028039103,0.9989747,0.0001068507,0.00004523394,0.0005289806],"study_design_scores_gemma":[0.00001527125,0.00013752976,0.0053346297,0.000018527022,0.00001515063,0.00038500596,0.00005227309,0.0005301448,0.9892352,0.000096860575,0.0041698804,0.000009606387],"about_ca_topic_score_codex":0.0009713322,"about_ca_topic_score_gemma":0.00097388565,"teacher_disagreement_score":0.0031447024,"about_ca_system_score_codex":0.0008261458,"about_ca_system_score_gemma":0.00047014025,"threshold_uncertainty_score":0.010520101},"labels":[],"label_agreement":null},{"id":"W2005285353","doi":"10.1212/wnl.54.11.2034","title":"Injecting rationale into interferon-β therapy","year":2000,"lang":"en","type":"letter","venue":"Neurology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital","funders":"","keywords":"Medicine; Interferon beta; Interferon; In vivo; Multiple sclerosis; Clinical trial; Internal medicine; Pharmacology; Immunology; Biology; Biotechnology","score_opus":0.01782990868492664,"score_gpt":0.24467698111595354,"score_spread":0.2268470724310269,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005285353","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0007436934,0.012403233,0.0013458754,0.9463203,0.030904949,0.000028728167,0.000017115937,0.000039477996,0.008196699],"genre_scores_gemma":[0.014966598,0.007327994,0.000999166,0.91941226,0.050775643,0.00007316552,0.000015446487,0.000030926712,0.006398857],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9961797,0.0019141098,0.00029948942,0.00038754812,0.0009636514,0.00025549295],"domain_scores_gemma":[0.9892047,0.008242294,0.00039866482,0.00055606605,0.0009925929,0.00060571503],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005768136,0.000680083,0.0008991786,0.000566003,0.0016609842,0.002759258,0.0015681844,0.020786434,0.00462858],"category_scores_gemma":[0.020316646,0.0003960493,0.000837251,0.0003893844,0.007921095,0.0053127143,0.0023399242,0.037112325,0.0040759537],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026415617,0.00021247774,0.0013919774,0.0005312113,0.00008425971,0.0077332924,0.0008276781,0.000276303,0.0020219707,0.16676632,0.7512763,0.068613976],"study_design_scores_gemma":[0.00024142729,0.00011614604,0.00032203985,0.000819255,0.000033194465,0.0052116574,0.00026345585,0.00044254682,0.00051035004,0.1380946,0.85391426,0.000031034797],"about_ca_topic_score_codex":0.00038160628,"about_ca_topic_score_gemma":0.00069131487,"teacher_disagreement_score":0.020786434,"about_ca_system_score_codex":0.0026919602,"about_ca_system_score_gemma":0.0016481753,"threshold_uncertainty_score":0.03050518},"labels":[],"label_agreement":null},{"id":"W2005534613","doi":"10.1165/rcmb.2013-0129oc","title":"Transcriptional and Epigenetic Modulation of Human Rhinovirus–Induced CXCL10 Production by Cigarette Smoke","year":2013,"lang":"en","type":"article","venue":"American Journal of Respiratory Cell and Molecular Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Rhinovirus; Cigarette smoke; Epigenetics; Smoke; Virology; Biology; Medicine; Chemistry; Gene; Genetics; Virus; Environmental health","score_opus":0.01130389819731293,"score_gpt":0.2497337870386384,"score_spread":0.2384298888413255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005534613","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990396,0.003842341,0.002012146,0.00020398512,0.0001485445,0.000042470725,0.00049996364,0.00007226609,0.0027823609],"genre_scores_gemma":[0.9949215,0.0014242426,0.0007196091,0.00014366354,0.000026510457,0.00005426913,0.00039157484,0.0000151118165,0.0023034199],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998529,0.000023788703,0.000009315843,0.000040439176,0.000028524919,0.00004506629],"domain_scores_gemma":[0.99992704,0.000013929576,0.000020763184,0.0000076205,0.00001489309,0.00001572595],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013016394,0.0001731511,0.0001898859,0.00015132406,0.00013467224,0.00022724413,0.00012033092,0.00017137665,0.0014197038],"category_scores_gemma":[0.00012276668,0.00014268605,0.00030225617,0.000082287545,0.00023951917,0.00013602959,0.00019151438,0.00041660466,0.00022202522],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027076126,0.000047474354,0.0007871359,0.00006562435,0.000010170531,0.000044107415,0.000041456267,0.0000352325,0.99607617,0.00014844007,0.00011320265,0.0023602776],"study_design_scores_gemma":[0.00009914966,0.00067525916,0.105067745,0.000039116163,0.00006644061,0.00028835973,0.00023508788,0.0020159562,0.88415277,0.0001971251,0.0071404516,0.000022602433],"about_ca_topic_score_codex":0.00074885675,"about_ca_topic_score_gemma":0.0012624928,"teacher_disagreement_score":0.0014197038,"about_ca_system_score_codex":0.00021778331,"about_ca_system_score_gemma":0.00018582861,"threshold_uncertainty_score":0.0047493577},"labels":[],"label_agreement":null},{"id":"W2005626121","doi":"10.1016/j.immuni.2014.02.006","title":"Noncanonical NF-κB Pathway Controls the Production of Type I Interferons in Antiviral Innate Immunity","year":2014,"lang":"en","type":"article","venue":"Immunity","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":142,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Cancer Institute","keywords":"Biology; Innate immune system; Transcription factor; Histone; Cell biology; Interferon; Immunity; Demethylase; NF-κB; Immune system; Signal transduction; Innate lymphoid cell; Immunology; Genetics; Gene","score_opus":0.01598678668365903,"score_gpt":0.2594677192288569,"score_spread":0.2434809325451979,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005626121","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8846014,0.06321086,0.0294668,0.0018962191,0.0010475528,0.00007037385,0.0011683548,0.00060938956,0.017928947],"genre_scores_gemma":[0.9806318,0.0076576713,0.0042186417,0.00017631701,0.00015578275,0.00003808188,0.00039885094,0.0000679834,0.006654792],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994282,0.0000758873,0.000043002245,0.00012523375,0.00013377142,0.00019378224],"domain_scores_gemma":[0.9996358,0.00003253966,0.00009060078,0.00005312033,0.00008593704,0.00010198048],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054542033,0.0006406085,0.00045872794,0.00042085536,0.0005488856,0.0015396395,0.000393197,0.00048272888,0.002448655],"category_scores_gemma":[0.0003818075,0.00029383556,0.00038947444,0.00022481129,0.0007344507,0.0013804849,0.0007299129,0.0013996636,0.0010682024],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010433873,0.00006384894,0.002500958,0.00029819805,0.000019176634,0.0003003612,0.00011687664,0.00024562576,0.97128963,0.0063359076,0.0007923983,0.016993536],"study_design_scores_gemma":[0.00012417031,0.0003949946,0.029542658,0.0002193086,0.00007137516,0.0018926573,0.0006558225,0.0049404944,0.9182969,0.015024968,0.028775714,0.000060982788],"about_ca_topic_score_codex":0.00034260438,"about_ca_topic_score_gemma":0.0006286015,"teacher_disagreement_score":0.002448655,"about_ca_system_score_codex":0.0010728432,"about_ca_system_score_gemma":0.00068705285,"threshold_uncertainty_score":0.008191526},"labels":[],"label_agreement":null},{"id":"W2006436416","doi":"10.1038/nsmb.2496","title":"Trim24-repressed VL30 retrotransposons regulate gene expression by producing noncoding RNA","year":2013,"lang":"en","type":"article","venue":"Nature Structural & Molecular Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":74,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics","keywords":"Derepression; Biology; Enhancer; Endogenous retrovirus; Long terminal repeat; Retrotransposon; Gene; Repressor; Genetics; Gene expression; Psychological repression; Transposable element; Genome","score_opus":0.004114783659224872,"score_gpt":0.25757564976000336,"score_spread":0.2534608661007785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006436416","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98700655,0.001291632,0.005466994,0.00015086104,0.00011746896,0.000035010755,0.0006981304,0.00048322466,0.0047502257],"genre_scores_gemma":[0.98448133,0.00021467086,0.0039989403,0.00011983894,0.000021926808,0.000032564247,0.0013721454,0.00021347633,0.009545064],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99961555,0.000047230737,0.000024363222,0.00009981445,0.00009772548,0.00011534132],"domain_scores_gemma":[0.99960655,0.00006474793,0.00007194156,0.00008494267,0.000064162996,0.00010767148],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024521956,0.0003987384,0.00033614313,0.0003505915,0.0004369496,0.0012661784,0.00048135847,0.00047445364,0.0041621313],"category_scores_gemma":[0.00026293154,0.00030002766,0.0005602745,0.00022482565,0.00045577902,0.00036083127,0.00042685782,0.0014498442,0.002810304],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006382922,0.000011034469,0.000119893986,0.000011960431,0.0000026271575,0.000030911895,0.000012450491,0.000031042884,0.9986652,0.00015254115,0.000064994965,0.00083347264],"study_design_scores_gemma":[0.000009181894,0.000067230605,0.0020630704,0.000003887836,0.000004560581,0.00008815118,0.000056685923,0.00065793295,0.9954927,0.000102235215,0.0014490956,0.0000054017373],"about_ca_topic_score_codex":0.0008823512,"about_ca_topic_score_gemma":0.0021895191,"teacher_disagreement_score":0.0041621313,"about_ca_system_score_codex":0.00091697223,"about_ca_system_score_gemma":0.00041014474,"threshold_uncertainty_score":0.013923705},"labels":[],"label_agreement":null},{"id":"W2006592777","doi":"10.1371/journal.pone.0118794","title":"The C-Terminal Sequence of IFITM1 Regulates Its Anti-HIV-1 Activity","year":2015,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Mutant; Viral entry; Viral envelope; Transmembrane protein; Glycoprotein; Amino acid; Peptide sequence; Virology; Subcellular localization; Transmembrane domain; Virus; Cell biology; Molecular biology; Viral replication; Biochemistry; Cytoplasm; Gene","score_opus":0.09730916930424147,"score_gpt":0.27168155839972374,"score_spread":0.17437238909548228,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006592777","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991441,0.0043659634,0.0023360758,0.00012699043,0.000034167606,0.000016688351,0.00031581326,0.00007362741,0.001289705],"genre_scores_gemma":[0.9949858,0.0008176021,0.0022440648,0.000055905475,0.000014267681,0.000019871795,0.00057359674,0.000018999814,0.0012699357],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989545,0.000012363796,0.000007846258,0.000025439971,0.000023824274,0.000035067067],"domain_scores_gemma":[0.9998491,0.000021497288,0.000060531285,0.000013478574,0.000019842495,0.000035634057],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000097808814,0.00028098465,0.00017914407,0.00012887716,0.00017030835,0.00026249047,0.00015471807,0.00033698702,0.0012756743],"category_scores_gemma":[0.00015141498,0.000089100635,0.00022953561,0.00009375636,0.00019260618,0.00019127129,0.00016754998,0.00050872134,0.000764748],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000069341775,0.000009246778,0.00021838272,0.000021282816,0.0000015978759,0.00003713315,0.000005870428,0.000036086745,0.9979411,0.00007014999,0.000039241786,0.0015506098],"study_design_scores_gemma":[0.000019947947,0.00019290997,0.015232461,0.00001458904,0.000010676899,0.00045962003,0.00002890077,0.0009899468,0.9781594,0.000114098475,0.00476955,0.000007843275],"about_ca_topic_score_codex":0.00023212178,"about_ca_topic_score_gemma":0.00022441187,"teacher_disagreement_score":0.0012756743,"about_ca_system_score_codex":0.00028602552,"about_ca_system_score_gemma":0.000145344,"threshold_uncertainty_score":0.0042675734},"labels":[],"label_agreement":null},{"id":"W2006766086","doi":"10.1371/journal.ppat.1003491","title":"Irf8-Regulated Genomic Responses Drive Pathological Inflammation during Cerebral Malaria","year":2013,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"IRF8; Biology; Interferon regulatory factors; Myeloid; Transcription factor; IRF1; Immunology; Gene; Innate immune system; Immune system; Genetics","score_opus":0.01338094919892319,"score_gpt":0.21135981475839763,"score_spread":0.19797886555947444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006766086","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972434,0.00034912926,0.0011033735,0.00003556367,0.0000051304924,0.0000067545257,0.0008145272,0.000055001354,0.0003871916],"genre_scores_gemma":[0.9955663,0.0002939254,0.0012939775,0.000055525645,0.000006498627,0.000030221496,0.0014598859,0.000025766869,0.0012678828],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998988,0.000008478549,0.0000052663245,0.00003505699,0.000019988323,0.000032362022],"domain_scores_gemma":[0.9999131,0.000008756493,0.000041923402,0.0000070127685,0.000007122395,0.000022060543],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006370163,0.0002530555,0.00017752241,0.000219567,0.00013429293,0.00015600378,0.00011164574,0.00014371795,0.0012362477],"category_scores_gemma":[0.000065828666,0.00012288192,0.00014331192,0.00015604231,0.00016924462,0.00010260887,0.00019745105,0.000398033,0.00027443137],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011656016,0.000008044775,0.00093023054,0.000018570718,0.000003512458,0.000052167023,0.000013985572,0.000031015123,0.99801093,0.00003825823,0.000038910097,0.00073777826],"study_design_scores_gemma":[0.0000246679,0.00025587855,0.21356347,0.000019088036,0.000038040715,0.0011166945,0.00016077196,0.0013250419,0.78036183,0.0003135185,0.0028105911,0.000010459521],"about_ca_topic_score_codex":0.00026304566,"about_ca_topic_score_gemma":0.00040550515,"teacher_disagreement_score":0.0012362477,"about_ca_system_score_codex":0.00016980035,"about_ca_system_score_gemma":0.00010375216,"threshold_uncertainty_score":0.004135728},"labels":[],"label_agreement":null},{"id":"W2007893158","doi":"10.1016/j.smim.2009.05.001","title":"RIG-I-like receptors: Sensing and responding to RNA virus infection","year":2009,"lang":"en","type":"review","venue":"Seminars in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":219,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Terry Fox Research Institute","funders":"Canadian Institutes of Health Research; Canadian Foundation for AIDS Research","keywords":"RIG-I; Biology; RNA; Virus; Receptor; Virology; Interferon; Endosome; Pattern recognition receptor; Cell biology; RNA virus; Innate immune system; Gene; Genetics","score_opus":0.020868086647408978,"score_gpt":0.3112416629487926,"score_spread":0.2903735763013836,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007893158","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00020656842,0.9961486,0.00044469498,0.0004883034,0.0011811102,0.000007030452,0.00001702885,0.000016386934,0.0014902764],"genre_scores_gemma":[0.0013287375,0.994668,0.0003747965,0.00039259312,0.0013652554,0.0000141588625,0.000047636466,0.0000025925508,0.0018062961],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998049,0.000027718865,0.000027286103,0.000036272606,0.000075180156,0.00002865177],"domain_scores_gemma":[0.9997683,0.000081977065,0.00004341637,0.000011041445,0.000049354006,0.00004593237],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068869337,0.0013010206,0.0013907519,0.0013362169,0.0002426068,0.0010794208,0.0013939821,0.0017373303,0.002273878],"category_scores_gemma":[0.0006402096,0.00035491074,0.00032861184,0.0014461571,0.0009066405,0.0019595388,0.00076444715,0.0021754298,0.003677574],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019628224,0.000063477506,0.000134387,0.0046125543,0.000036155183,0.0002907153,0.000049420727,0.00039046668,0.005841206,0.003285403,0.049929522,0.93517035],"study_design_scores_gemma":[0.000030182006,0.00008291543,0.00047389607,0.00072690716,0.000036415822,0.0013390286,0.000052514453,0.00009711673,0.000899996,0.0021732247,0.994072,0.000015791205],"about_ca_topic_score_codex":0.00035176708,"about_ca_topic_score_gemma":0.0006405734,"teacher_disagreement_score":0.002273878,"about_ca_system_score_codex":0.0006725531,"about_ca_system_score_gemma":0.0007506651,"threshold_uncertainty_score":0.0076069236},"labels":[],"label_agreement":null},{"id":"W2008892095","doi":"10.1074/jbc.m112.431148","title":"Nuclease Activity of the Human SAMHD1 Protein Implicated in the Aicardi-Goutières Syndrome and HIV-1 Restriction","year":2013,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":215,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Canada; Ontario Genomics; Ontario Genomics Institute; Government of Canada; McGill University","keywords":"SAMHD1; Nuclease; Biology; RNA; Molecular biology; DNA; Nucleic acid; Biochemistry; Cell biology; Reverse transcriptase; Gene","score_opus":0.017023548846432788,"score_gpt":0.24014053342309716,"score_spread":0.22311698457666437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008892095","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962226,0.0022170073,0.0010378346,0.00003311489,0.0000076170204,0.000005254178,0.00013298613,0.000020156504,0.00032340773],"genre_scores_gemma":[0.9977816,0.00032205306,0.0010385605,0.000019790024,0.000004359971,0.000004926728,0.0003757389,0.0000027420479,0.00045033984],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998914,0.00002442276,0.000009953439,0.00002830049,0.000027041266,0.000018826104],"domain_scores_gemma":[0.99984074,0.00005163453,0.000043073203,0.0000170986,0.000011216231,0.000036283967],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013497913,0.00023130898,0.00013815485,0.0003551749,0.000094155585,0.00015052721,0.00009572824,0.00025887473,0.00096591975],"category_scores_gemma":[0.00031751939,0.000097573495,0.00020469184,0.00016695115,0.00019951422,0.00011069148,0.00016021413,0.00017252796,0.00020317033],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008882919,0.000011104501,0.0027376052,0.000050434686,0.000016936687,0.00025010534,0.00003593435,0.000059545146,0.9945933,0.00009743602,0.000024616356,0.0020341894],"study_design_scores_gemma":[0.000017384795,0.0002987136,0.11729312,0.000014600328,0.000043213287,0.006119022,0.000058801288,0.0019709908,0.87028426,0.00034578,0.0035404933,0.000013559334],"about_ca_topic_score_codex":0.0003077598,"about_ca_topic_score_gemma":0.00025560937,"teacher_disagreement_score":0.00096591975,"about_ca_system_score_codex":0.00016477468,"about_ca_system_score_gemma":0.00008992279,"threshold_uncertainty_score":0.0032313466},"labels":[],"label_agreement":null},{"id":"W2009178641","doi":"10.1089/jir.2006.26.40","title":"Antiviral Activity of Transiently Expressed IFN-κ Is Cell-Associated","year":2006,"lang":"en","type":"article","venue":"Journal of Interferon & Cytokine Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BioPhage Pharma (Canada)","funders":"","keywords":"Biology; Cell culture; Interferon; Antiviral protein; Recombinant DNA; Virology; Replicon; Transfection; Cell; Hepatitis C virus; Virus; Viral replication; Molecular biology; RNA; Gene; Plasmid; Biochemistry; Genetics","score_opus":0.03333835048590647,"score_gpt":0.3210926734542834,"score_spread":0.2877543229683769,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009178641","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98508877,0.002138245,0.0072793853,0.00012874567,0.000121314806,0.00006560566,0.0012701267,0.00010713183,0.0038006376],"genre_scores_gemma":[0.9798824,0.0011665757,0.009398616,0.00006779954,0.0000326137,0.000095665215,0.0027835919,0.00007494283,0.006497686],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99968517,0.000059866827,0.00003778747,0.00007048481,0.000092415554,0.000054305194],"domain_scores_gemma":[0.9998204,0.00006724553,0.000022832297,0.00003953036,0.000027537963,0.000022477843],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027268473,0.00035141263,0.00046377763,0.00015228418,0.00018831418,0.00055413356,0.00018996539,0.00022145566,0.0019660091],"category_scores_gemma":[0.00017797577,0.00013457277,0.00027534002,0.000260245,0.00028931006,0.00025816855,0.00020343551,0.0009001653,0.0006428089],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006185108,0.000028164808,0.00006892371,0.00002612322,0.0000026960338,0.000010371951,0.000011539396,0.000020362739,0.9992124,0.00009054142,0.000021484091,0.00044549603],"study_design_scores_gemma":[0.000008293505,0.00014321606,0.0008628019,0.00000497968,0.000008858888,0.00005417429,0.000016798169,0.00034908438,0.9971004,0.00003099906,0.0014178297,0.000002427143],"about_ca_topic_score_codex":0.00043035974,"about_ca_topic_score_gemma":0.00057437515,"teacher_disagreement_score":0.0019660091,"about_ca_system_score_codex":0.00044362637,"about_ca_system_score_gemma":0.00030044845,"threshold_uncertainty_score":0.0065768957},"labels":[],"label_agreement":null},{"id":"W2011235873","doi":"10.1089/jir.2012.0010","title":"Individual Interferon Regulatory Factor-3 Thiol Residues Are Not Critical for Its Activation Following Virus Infection","year":2012,"lang":"en","type":"article","venue":"Journal of Interferon & Cytokine Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research; Institut National de la Santé et de la Recherche Médicale; McMaster University","keywords":"Interferon; Transcription factor; Interferon regulatory factors; Sendai virus; Cell biology; Biology; Phosphorylation; Cysteine; IRF1; Innate immune system; Signal transduction; Chemistry; Biochemistry; Receptor; Gene; Genetics","score_opus":0.13626982981939534,"score_gpt":0.411277155637528,"score_spread":0.27500732581813264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011235873","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997834,0.0005289657,0.0010674398,0.000035168177,0.000013895779,0.000010239658,0.000073597264,0.00001436425,0.00042235048],"genre_scores_gemma":[0.998637,0.00015612498,0.00053765276,0.000017386637,0.0000036386307,0.000008994969,0.0001556102,0.0000043125747,0.00047926226],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987364,0.000022792,0.000010918133,0.000026326315,0.000030484647,0.000035796413],"domain_scores_gemma":[0.9998683,0.000020506914,0.000039430895,0.000023813265,0.000021217096,0.000026758917],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001870012,0.00016974013,0.00022512961,0.000077856035,0.00012342058,0.00017331856,0.00019884385,0.00027708255,0.00081522024],"category_scores_gemma":[0.00019963259,0.00010220879,0.00024397772,0.000072914176,0.00017595215,0.00017880023,0.00014239315,0.00039657688,0.00025470124],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001563212,0.0000099536455,0.00037552472,0.000012527628,0.0000034322002,0.000023484668,0.0000072597754,0.000027388547,0.9988399,0.000030032908,0.000007141378,0.0005069296],"study_design_scores_gemma":[0.000006513873,0.00013083726,0.008409617,0.000003080976,0.000012916745,0.00023440865,0.000022735303,0.0004965644,0.9899455,0.000054258184,0.0006805663,0.000003100604],"about_ca_topic_score_codex":0.00037636512,"about_ca_topic_score_gemma":0.00048695048,"teacher_disagreement_score":0.00081522024,"about_ca_system_score_codex":0.00025926798,"about_ca_system_score_gemma":0.00018003916,"threshold_uncertainty_score":0.002727151},"labels":[],"label_agreement":null},{"id":"W2012451630","doi":"10.1158/0008-5472.can-06-1279","title":"Distinct Roles for IFN Regulatory Factor (IRF)-3 and IRF-7 in the Activation of Antitumor Properties of Human Macrophages","year":2006,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":86,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; McGill University","funders":"","keywords":"Tumor necrosis factor alpha; Cancer research; Biology; Signal transduction; Immunology; Fas ligand; Cancer cell; Apoptosis; Cell biology; Programmed cell death; Cancer","score_opus":0.07123809849663537,"score_gpt":0.3631362682664619,"score_spread":0.2918981697698265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012451630","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98841673,0.005807712,0.0033764632,0.00016141559,0.00002670439,0.000038887763,0.000103452476,0.000027099895,0.0020414146],"genre_scores_gemma":[0.9966079,0.001270888,0.0012235943,0.000089669506,0.00001627749,0.000035005578,0.00011850787,0.000004795538,0.00063335465],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997788,0.00007012379,0.000016165319,0.000026261232,0.000038929138,0.00006966107],"domain_scores_gemma":[0.99989057,0.000027264925,0.000026150376,0.000017932347,0.00001617925,0.000021920334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045654716,0.0002915632,0.00018702955,0.00022042323,0.00012797718,0.0003583251,0.00017229305,0.00040308962,0.0008184731],"category_scores_gemma":[0.00022001148,0.00011759245,0.0003837971,0.00007499769,0.00032314984,0.00026835976,0.00025473206,0.00049039343,0.00031952054],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012287325,0.000085161584,0.002503474,0.000072138115,0.000013357718,0.00017598884,0.000079250436,0.00013143638,0.98759425,0.0012165428,0.0000544323,0.006845204],"study_design_scores_gemma":[0.0002007768,0.0014744282,0.033059802,0.00007097207,0.00011181021,0.0024056241,0.0003415133,0.001940204,0.95341307,0.0019910543,0.0049657277,0.000024825547],"about_ca_topic_score_codex":0.00011130654,"about_ca_topic_score_gemma":0.000105584404,"teacher_disagreement_score":0.0008184731,"about_ca_system_score_codex":0.00019175044,"about_ca_system_score_gemma":0.000247731,"threshold_uncertainty_score":0.002737999},"labels":[],"label_agreement":null},{"id":"W2012510870","doi":"10.1159/000052605","title":"Extracellular Signal-Regulated Kinase and the Small GTP-Binding Protein p21Rac1 Are Involved in the Regulation of Gene Transcription by Angiotensin II","year":2001,"lang":"en","type":"article","venue":"Nephron Experimental Nephrology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Protein kinase C; Angiotensin II; Molecular biology; MAPK/ERK pathway; Bisindolylmaleimide; Immediate early gene; Biology; Protein kinase A; Promoter; Chemistry; Signal transduction; Kinase; Cell biology; Gene expression; Receptor; Gene; Biochemistry","score_opus":0.014371129943328734,"score_gpt":0.2208058991044848,"score_spread":0.20643476916115608,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012510870","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922396,0.0034050755,0.002368913,0.00022902842,0.00003299212,0.000022347933,0.00019551464,0.000045332297,0.0014611732],"genre_scores_gemma":[0.99471694,0.0014363016,0.0011958888,0.000029930456,0.000019013854,0.00004041014,0.00036249528,0.000007076995,0.0021920553],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998091,0.000035263034,0.000010892353,0.000025412359,0.000042571697,0.000076856384],"domain_scores_gemma":[0.9998698,0.000022494953,0.00003919857,0.000011465939,0.00001820455,0.000038782855],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013003392,0.00034722828,0.0002473095,0.0002522803,0.00031365262,0.00031599615,0.00015770114,0.00041241598,0.0010394279],"category_scores_gemma":[0.00022899566,0.00018574942,0.00028426986,0.00011874584,0.00022622655,0.0003419169,0.00017757794,0.0005384427,0.00039835487],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013762324,0.000021744592,0.00024414307,0.000022630493,0.000002442891,0.000078308345,0.000013845199,0.00004646541,0.9985025,0.0001879455,0.000024056515,0.0007182165],"study_design_scores_gemma":[0.0000591162,0.0003452049,0.055174492,0.000015244536,0.000029758789,0.0010330214,0.00009614256,0.004752114,0.9340034,0.00064623443,0.0038318166,0.000013369495],"about_ca_topic_score_codex":0.0004213003,"about_ca_topic_score_gemma":0.0005375256,"teacher_disagreement_score":0.0010394279,"about_ca_system_score_codex":0.000428587,"about_ca_system_score_gemma":0.00017905493,"threshold_uncertainty_score":0.0034772158},"labels":[],"label_agreement":null},{"id":"W2012855647","doi":"10.1371/journal.pone.0099988","title":"DMXAA Causes Tumor Site-Specific Vascular Disruption in Murine Non-Small Cell Lung Cancer, and like the Endogenous Non-Canonical Cyclic Dinucleotide STING Agonist, 2′3′-cGAMP, Induces M2 Macrophage Repolarization","year":2014,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":207,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Bone and Joint Health Institute; University of Calgary","funders":"Canadian Cancer Society Research Institute; Canadian Institutes of Health Research","keywords":"Cancer research; Sting; Stimulator of interferon genes; Tumor necrosis factor alpha; Macrophage; Necrosis; Medicine; Lung; Pathology; Lewis lung carcinoma; Inflammation; In vivo; Cancer; Pharmacology; Biology; Metastasis; Immunology; Receptor; Internal medicine; Innate immune system","score_opus":0.02542612229614612,"score_gpt":0.22281301635623843,"score_spread":0.1973868940600923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012855647","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953152,0.0007397872,0.001759837,0.000089146226,0.00003043026,0.000060848764,0.0006589905,0.000117694355,0.0012281267],"genre_scores_gemma":[0.991193,0.00062544935,0.0018300042,0.000048335358,0.00001169642,0.00010630762,0.00084199256,0.00003133341,0.005311999],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997589,0.000049228034,0.000023621174,0.000048152375,0.00005196924,0.00006817794],"domain_scores_gemma":[0.9998241,0.000030017009,0.000051234005,0.000028578363,0.000010830275,0.000055204146],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001898582,0.00041163983,0.00019368758,0.0003847868,0.00016317428,0.00020925386,0.00024258114,0.0003954389,0.001880823],"category_scores_gemma":[0.00008171296,0.0002254847,0.0003075454,0.0001863341,0.00028502158,0.0001888999,0.00018605856,0.0007645994,0.000420934],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014302084,0.000060757717,0.00009633186,0.000019940628,0.0000030874355,0.00004422672,0.0000137965535,0.000047519166,0.9990466,0.00011544477,0.00002659472,0.00038256714],"study_design_scores_gemma":[0.000017840313,0.00069048395,0.0015545761,0.0000027514118,0.0000075930093,0.00015945135,0.000016957529,0.00057672546,0.99602723,0.000030307196,0.00091426034,0.0000018202015],"about_ca_topic_score_codex":0.0010995824,"about_ca_topic_score_gemma":0.0017187439,"teacher_disagreement_score":0.001880823,"about_ca_system_score_codex":0.00036365143,"about_ca_system_score_gemma":0.00023773362,"threshold_uncertainty_score":0.0062919855},"labels":[],"label_agreement":null},{"id":"W2012991731","doi":"10.1128/jvi.03114-13","title":"Inhibition of Dengue and Chikungunya Virus Infections by RIG-I-Mediated Type I Interferon-Independent Stimulation of the Innate Antiviral Response","year":2014,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":133,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"National Institutes of Health; Canadian Institutes of Health Research; European Commission; National Institute for Health and Care Research","keywords":"Biology; Dengue virus; Chikungunya; Virology; RIG-I; Innate immune system; Dengue fever; Viral replication; Interferon; Virus; Antibody-dependent enhancement; Vesicular stomatitis virus; Immune system; Immunology","score_opus":0.0062325550374775565,"score_gpt":0.23683061737593541,"score_spread":0.23059806233845787,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012991731","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9869048,0.008325369,0.0019995086,0.00007876653,0.000055064833,0.00005890087,0.00035137005,0.00003075319,0.0021955979],"genre_scores_gemma":[0.994269,0.0023288135,0.001772841,0.000058703667,0.000016367188,0.000057387562,0.00036587345,0.000005372327,0.0011255839],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982893,0.00004542559,0.000021943097,0.00002287207,0.00003977643,0.00004102921],"domain_scores_gemma":[0.9999424,0.000019114432,0.000013903936,0.0000085509,0.0000068788922,0.000009035478],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002205054,0.000337508,0.00020790212,0.00007272398,0.00008819049,0.00024419112,0.0001736769,0.0002316705,0.0014582707],"category_scores_gemma":[0.00010092907,0.000065645865,0.0002595534,0.000065674416,0.0001974215,0.00014407387,0.00016562987,0.00047803496,0.00035800604],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025646045,0.000051605763,0.00019246306,0.00012364642,0.0000068339245,0.000023146336,0.000009547262,0.00010355795,0.996329,0.00006158544,0.00002947525,0.0028126072],"study_design_scores_gemma":[0.0000334931,0.0012073362,0.0031400102,0.000014798489,0.000016506012,0.00017959457,0.000015331863,0.000434076,0.993386,0.00003366054,0.001535059,0.000004182545],"about_ca_topic_score_codex":0.00014140664,"about_ca_topic_score_gemma":0.00022938573,"teacher_disagreement_score":0.0014582707,"about_ca_system_score_codex":0.00016815048,"about_ca_system_score_gemma":0.00021342818,"threshold_uncertainty_score":0.004878342},"labels":[],"label_agreement":null},{"id":"W2015290375","doi":"10.1016/j.cyto.2010.07.282","title":"PS2-77 IFN-mediated regulation of protein translation and its role in an antiviral immune response","year":2010,"lang":"en","type":"article","venue":"Cytokine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Toronto General Hospital; University of Toronto","funders":"","keywords":"Immune system; Translation (biology); Immunology; Interferon; Virology; Medicine; Biology; Genetics; Messenger RNA; Gene","score_opus":0.010924455610159598,"score_gpt":0.24410773551729914,"score_spread":0.23318327990713955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015290375","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97022927,0.014735918,0.0036526413,0.00081548636,0.00019256373,0.000038018676,0.0005257027,0.00012542987,0.009684989],"genre_scores_gemma":[0.9886989,0.002373273,0.0016023847,0.0001099197,0.000067851055,0.000031304116,0.00060348725,0.00003841948,0.006474405],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998635,0.000026404849,0.000009916863,0.000020028185,0.000028000239,0.00005213478],"domain_scores_gemma":[0.9999269,0.000017832856,0.000012102293,0.0000116051,0.000011764124,0.000019662702],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002871466,0.00060247094,0.00035699975,0.00028267314,0.00041476407,0.0007611629,0.00021655376,0.00035261604,0.0019951644],"category_scores_gemma":[0.00018039969,0.00013354169,0.00033705417,0.00021804177,0.000562434,0.00057716516,0.00025735216,0.0007520506,0.00074335217],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013393804,0.000047416732,0.00025474402,0.000070367765,0.0000071720447,0.00022575009,0.00003029963,0.000264907,0.99193984,0.0014307973,0.00019079735,0.0041984487],"study_design_scores_gemma":[0.000031986452,0.00018977636,0.003678572,0.000010078047,0.000010054758,0.00022366259,0.00006490586,0.0012344291,0.9909043,0.000397797,0.003247138,0.0000073254214],"about_ca_topic_score_codex":0.001099884,"about_ca_topic_score_gemma":0.0009409026,"teacher_disagreement_score":0.0019951644,"about_ca_system_score_codex":0.0010093335,"about_ca_system_score_gemma":0.00048779414,"threshold_uncertainty_score":0.007323265},"labels":[],"label_agreement":null},{"id":"W2015310325","doi":"10.1056/nejmoa1312625","title":"Activated STING in a Vascular and Pulmonary Syndrome","year":2014,"lang":"en","type":"article","venue":"New England Journal of Medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1387,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"National Institutes of Health","keywords":"Medicine; Sting; Cardiology; Internal medicine; Intensive care medicine","score_opus":0.009792190731850137,"score_gpt":0.23438992595571148,"score_spread":0.22459773522386134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015310325","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996449,0.00091828645,0.0009437806,0.00013315506,0.000016105641,0.00001568656,0.000115581366,0.000060044367,0.0013483745],"genre_scores_gemma":[0.9991309,0.00020211349,0.00037929,0.000048441034,0.000019736966,0.0000039122137,0.00005348808,0.0000051129664,0.00015696886],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99982303,0.00003276422,0.000020366051,0.000053213644,0.000035435554,0.00003524658],"domain_scores_gemma":[0.99956435,0.00014272996,0.00013229225,0.000022009628,0.000025934893,0.00011266625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012287407,0.0008194591,0.000297582,0.0008622914,0.00043019996,0.00029149177,0.00030818113,0.0008248582,0.0024597405],"category_scores_gemma":[0.0007667084,0.00014567311,0.0002660808,0.0005304592,0.00066093577,0.00021773118,0.0004019601,0.0005501715,0.00029350095],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007143632,0.0001282061,0.20714185,0.00028466925,0.00013344234,0.65439016,0.00081244286,0.0004977637,0.11657976,0.0020300255,0.0007769921,0.016510297],"study_design_scores_gemma":[0.00004520541,0.00025883378,0.07858766,0.00005016009,0.00007707842,0.90756863,0.00017111214,0.0006437374,0.010668584,0.00039446255,0.0015213008,0.000013275241],"about_ca_topic_score_codex":0.00049759826,"about_ca_topic_score_gemma":0.00043364515,"teacher_disagreement_score":0.0024597405,"about_ca_system_score_codex":0.00023246842,"about_ca_system_score_gemma":0.0002252232,"threshold_uncertainty_score":0.00822866},"labels":[],"label_agreement":null},{"id":"W2016322257","doi":"10.1016/j.cyto.2009.07.450","title":"Activation of the RIG-I signaling pathway inhibits HIV-1 replication","year":2009,"lang":"en","type":"article","venue":"Cytokine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Replication (statistics); Human immunodeficiency virus (HIV); Cell biology; RIG-I; Signal transduction; Chemistry; Biology; Virology; Genetics; Receptor","score_opus":0.013998386304503119,"score_gpt":0.23935657335545757,"score_spread":0.22535818705095445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016322257","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9875745,0.0035086556,0.002372112,0.0004366051,0.00020997284,0.0000443176,0.00043645294,0.00020844395,0.005208908],"genre_scores_gemma":[0.9962134,0.0005865812,0.00081781996,0.000059936243,0.000022333916,0.00002869176,0.00038429623,0.000013902348,0.0018730202],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99946576,0.00016050386,0.000040469688,0.000037436734,0.000084307394,0.00021141965],"domain_scores_gemma":[0.9997222,0.00009984852,0.000034306893,0.00007405013,0.000016668328,0.000052842162],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044994248,0.00051710487,0.00043360793,0.00032040334,0.00033530506,0.0007929973,0.0003809642,0.0005727098,0.0026794155],"category_scores_gemma":[0.00046744966,0.00021466207,0.0005498362,0.0002035232,0.0005803453,0.000319234,0.0002868084,0.0021779279,0.0008749319],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020998584,0.00052720023,0.00037880449,0.00010949416,0.000036312464,0.00008687288,0.000046490215,0.00084537454,0.9865436,0.0010683937,0.0005986057,0.007658979],"study_design_scores_gemma":[0.0001578436,0.0016037432,0.0018150345,0.000016664002,0.000031797204,0.00021623296,0.00005782967,0.0025128822,0.9906942,0.0002865296,0.0025954328,0.000011823669],"about_ca_topic_score_codex":0.0006366225,"about_ca_topic_score_gemma":0.0009763318,"teacher_disagreement_score":0.0026794155,"about_ca_system_score_codex":0.0006108845,"about_ca_system_score_gemma":0.0007058309,"threshold_uncertainty_score":0.008963525},"labels":[],"label_agreement":null},{"id":"W2017760549","doi":"10.1038/ng.373","title":"Mutations involved in Aicardi-Goutières syndrome implicate SAMHD1 as regulator of the innate immune response","year":2009,"lang":"en","type":"article","venue":"Nature Genetics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":684,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital","funders":"National Institute of Neurological Disorders and Stroke; Manchester Biomedical Research Centre; National Institutes of Health; Newlife the Charity for Disabled Children; NIHR Biomedical Research Centre, Royal Marsden NHS Foundation Trust/Institute of Cancer Research; Wellcome Trust","keywords":"SAMHD1; Biology; Autoimmunity; Regulator; Genetics; Mendelian inheritance; Immune system; Gene; Innate immune system; Locus (genetics); Immunology; RNA; Reverse transcriptase","score_opus":0.006869663857120431,"score_gpt":0.25728623114744764,"score_spread":0.2504165672903272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017760549","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934477,0.0010144593,0.0026446318,0.00044948174,0.0000645186,0.000014166964,0.00015312029,0.000177551,0.0020343622],"genre_scores_gemma":[0.99708647,0.00019649105,0.0020250545,0.00006727444,0.000026727459,0.000006020802,0.000055228313,0.00001543751,0.0005211783],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998116,0.0000489446,0.000017609389,0.000037884703,0.00005696411,0.000027020573],"domain_scores_gemma":[0.99954885,0.00020392892,0.00012074394,0.000026171696,0.000020830741,0.00007947754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017271297,0.0008055246,0.000345957,0.000921553,0.00047363373,0.00039770623,0.00036951408,0.0013380903,0.0021208348],"category_scores_gemma":[0.0007307028,0.00022578266,0.0002639873,0.00039497644,0.0008787024,0.0003056023,0.0003477464,0.000794448,0.0002901116],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008890634,0.00006288217,0.037938334,0.00012691661,0.00013658068,0.05617582,0.00041281298,0.0010283198,0.88404596,0.0048980676,0.0010075263,0.013277752],"study_design_scores_gemma":[0.00035164235,0.0004859294,0.30767554,0.00012713557,0.00038826297,0.2858187,0.000581804,0.012706464,0.36700666,0.009338795,0.015398685,0.00012044107],"about_ca_topic_score_codex":0.0009314017,"about_ca_topic_score_gemma":0.001108415,"teacher_disagreement_score":0.0021208348,"about_ca_system_score_codex":0.00038169048,"about_ca_system_score_gemma":0.00019432207,"threshold_uncertainty_score":0.00709486},"labels":[],"label_agreement":null},{"id":"W2018172685","doi":"10.1016/j.matbio.2007.09.009","title":"Proteomic analysis of the LPS-induced stress response in rat chondrocytes reveals induction of innate immune response components in articular cartilage","year":2007,"lang":"en","type":"article","venue":"Matrix Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":86,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Canadian Institutes of Health Research; Shriners Hospitals for Children - Canada","funders":"","keywords":"Innate immune system; Cartilage; Articular cartilage; Immune system; Cell biology; Inflammatory response; Chemistry; Chondrocyte; Immunology; Inflammation; Biology; Medicine; Osteoarthritis; Anatomy; Pathology","score_opus":0.01782528892545061,"score_gpt":0.28247674950002766,"score_spread":0.26465146057457706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018172685","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941702,0.001984414,0.0018644857,0.00008760828,0.00003149819,0.000018731134,0.0009029586,0.00002405483,0.0009161392],"genre_scores_gemma":[0.98940945,0.0019182587,0.0022617336,0.00011955126,0.00003877654,0.000047979862,0.0021340963,0.000022452632,0.0040476373],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999138,0.0000075090993,0.0000068803024,0.000015337711,0.000028122879,0.000028256949],"domain_scores_gemma":[0.999843,0.000018367795,0.000034948553,0.00001273967,0.000045086825,0.000045927434],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012420642,0.0004728312,0.00033082475,0.0003982854,0.00029823015,0.0003167493,0.000147852,0.00023450065,0.0010576713],"category_scores_gemma":[0.00015824522,0.00019895857,0.00040656127,0.0002542759,0.00027204357,0.0002890801,0.00023011342,0.0003962504,0.00048740188],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009702001,0.000005935272,0.00031046878,0.000022298733,0.0000032591659,0.00004605715,0.00001060311,0.000009363157,0.99916375,0.0000145603935,0.000011556388,0.00030511603],"study_design_scores_gemma":[0.000018992496,0.00040186854,0.13022938,0.000022770357,0.000059272108,0.0008062298,0.0003401402,0.00054602337,0.8657053,0.00013384604,0.0017179886,0.000018265375],"about_ca_topic_score_codex":0.0013244844,"about_ca_topic_score_gemma":0.0020688903,"teacher_disagreement_score":0.0013244844,"about_ca_system_score_codex":0.00024189355,"about_ca_system_score_gemma":0.0003107598,"threshold_uncertainty_score":0.0035383105},"labels":[],"label_agreement":null},{"id":"W2020314417","doi":"10.1371/journal.pone.0005500","title":"Functional Analysis of a Dominant Negative Mutation of Interferon Regulatory Factor 5","year":2009,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Terry Fox Research Institute","funders":"Canadian Institutes of Health Research; Cancer Research Society","keywords":"Biology; Transactivation; IRF1; Interferon regulatory factors; Transcription factor; CIITA; Interferon; Cell biology; Molecular biology; Immune system; Genetics; T cell; Gene","score_opus":0.032591207985653445,"score_gpt":0.23717802698388257,"score_spread":0.20458681899822911,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020314417","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98938143,0.00064596103,0.0076350905,0.00018466807,0.000080859754,0.00006319601,0.00083846983,0.00016364446,0.0010066148],"genre_scores_gemma":[0.99194056,0.0002827592,0.005476459,0.00008068364,0.000015935335,0.000032657237,0.0008763537,0.00005053866,0.0012441227],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997937,0.00004588052,0.000026060934,0.000039163682,0.00006210009,0.000033019594],"domain_scores_gemma":[0.9997483,0.000078164296,0.00008187534,0.000025616953,0.000021488913,0.000044543383],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002050677,0.0006663761,0.0001964447,0.00023550243,0.00019493965,0.00026608666,0.0003861722,0.00048729638,0.0015378146],"category_scores_gemma":[0.0002067735,0.0001546899,0.00039607083,0.00011770183,0.0002999313,0.00009371435,0.00016365232,0.000645705,0.00067831326],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006480258,0.000020968493,0.00010726356,0.000021342457,0.000005788529,0.00022088517,0.0000065823297,0.000055935292,0.99882966,0.00007816102,0.00002730343,0.00056131405],"study_design_scores_gemma":[0.000060518752,0.00039792707,0.0024634823,0.000014628313,0.00006667558,0.0037570696,0.000030001698,0.0028143458,0.9867764,0.000072548566,0.003533972,0.000012359176],"about_ca_topic_score_codex":0.0005818709,"about_ca_topic_score_gemma":0.0005608056,"teacher_disagreement_score":0.0015378146,"about_ca_system_score_codex":0.00037347004,"about_ca_system_score_gemma":0.00022374466,"threshold_uncertainty_score":0.005144477},"labels":[],"label_agreement":null},{"id":"W2020595428","doi":"10.1089/vim.2005.18.474","title":"Statins Could Be Used to Control Replication of Some Viruses, Including HIV-1","year":2005,"lang":"en","type":"review","venue":"Viral Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Prenylation; Statin; Cholesterol; Human immunodeficiency virus (HIV); Biology; Viral replication; Immunology; Pharmacology; Virology; Virus; Enzyme; Biochemistry","score_opus":0.10196627653818037,"score_gpt":0.3842373901698683,"score_spread":0.28227111363168794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020595428","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005562194,0.9924252,0.00043841518,0.0005721276,0.00047077917,0.000010426241,0.000021838807,0.000019128278,0.0054858373],"genre_scores_gemma":[0.0036227684,0.9872729,0.0007165905,0.0004721438,0.00044217386,0.000017800785,0.0000467875,0.0000034614466,0.0074053933],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999145,0.000016356702,0.000009742845,0.000017313925,0.000030766634,0.000011323551],"domain_scores_gemma":[0.99993384,0.000020516904,0.000012663022,0.000003917408,0.00001706699,0.000012060426],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030198914,0.0007445659,0.0008673895,0.0011274392,0.00028895692,0.0006114781,0.00042788815,0.0010518904,0.004752272],"category_scores_gemma":[0.00021605322,0.00016697966,0.0002678618,0.00077030895,0.0004153629,0.00092199526,0.0003701822,0.0010377488,0.00482159],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012225182,0.00007870102,0.00019592672,0.003925864,0.000037565052,0.00046549173,0.000050556053,0.00015875,0.011518664,0.00441517,0.018567123,0.9604639],"study_design_scores_gemma":[0.000021772683,0.00009923515,0.00069019326,0.0006203665,0.000028167457,0.0018358296,0.00003209519,0.00003966237,0.0020299107,0.0013516196,0.99324363,0.0000075584276],"about_ca_topic_score_codex":0.00043367554,"about_ca_topic_score_gemma":0.0009785229,"teacher_disagreement_score":0.004752272,"about_ca_system_score_codex":0.00037780573,"about_ca_system_score_gemma":0.00036811383,"threshold_uncertainty_score":0.01589793},"labels":[],"label_agreement":null},{"id":"W2020856519","doi":"10.1016/j.molimm.2012.03.034","title":"Avian influenza rapidly induces antiviral genes in duck lung and intestine","year":2012,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":86,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; American Lebanese Syrian Associated Charities","keywords":"Biology; Virology; Gene; Influenza A virus subtype H5N1; Major histocompatibility complex; Suppression subtractive hybridization; Virus; Immune system; Interferon; Innate immune system; Influenza A virus; Microbiology; Immunology; Gene expression; Genetics; cDNA library","score_opus":0.010971397363472168,"score_gpt":0.2588155318627994,"score_spread":0.2478441344993272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020856519","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99578494,0.001373617,0.00049644697,0.00007142117,0.00005236149,0.000024381028,0.00036023016,0.000032272827,0.0018042969],"genre_scores_gemma":[0.9934161,0.00050302374,0.0005250981,0.000091522554,0.000024910354,0.000033994264,0.0005474608,0.00001644655,0.0048415666],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986804,0.000019576846,0.000008790571,0.00002926507,0.000018653243,0.000055644923],"domain_scores_gemma":[0.9998241,0.000040462546,0.000030968815,0.000021620997,0.000024313891,0.00005858623],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011498369,0.00028071902,0.00029464092,0.000236854,0.00020909174,0.0003441033,0.000085826316,0.00021778849,0.0015168317],"category_scores_gemma":[0.00011394297,0.00023642575,0.0003117509,0.00009052626,0.00023883961,0.00019720383,0.00017390508,0.0006156382,0.00036945698],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042319222,0.000012846045,0.001052366,0.00002922365,0.0000043113523,0.000065120366,0.000022925004,0.000020924635,0.99761534,0.000031458003,0.000041712978,0.00068065186],"study_design_scores_gemma":[0.000070343674,0.0010981798,0.19047736,0.000020923966,0.00005117646,0.00045794316,0.0005592673,0.00069213094,0.8036981,0.00011490549,0.002747051,0.000012617365],"about_ca_topic_score_codex":0.001135813,"about_ca_topic_score_gemma":0.0029140746,"teacher_disagreement_score":0.0015168317,"about_ca_system_score_codex":0.0004937085,"about_ca_system_score_gemma":0.00018000173,"threshold_uncertainty_score":0.0050742626},"labels":[],"label_agreement":null},{"id":"W2020909982","doi":"10.1073/pnas.1316941111","title":"TRIM14 is a mitochondrial adaptor that facilitates retinoic acid-inducible gene-I–like receptor-mediated innate immune response","year":2013,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":136,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Science Fund for Distinguished Young Scholars; National Key Research and Development Program of China; Program for New Century Excellent Talents in University; University of Illinois at Urbana-Champaign; McGill University","keywords":"Innate immune system; Biology; Signal transducing adaptor protein; Cell biology; Gene knockdown; RIG-I; Mitochondrion; Immune system; Pattern recognition receptor; Signal transduction; Immunology; Gene; Genetics","score_opus":0.03841965868628218,"score_gpt":0.2768307216012424,"score_spread":0.23841106291496023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020909982","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9770428,0.0048594777,0.010846312,0.00043162084,0.00015477063,0.000051891726,0.00077509845,0.00032148254,0.005516471],"genre_scores_gemma":[0.9832751,0.0014254813,0.005614955,0.00015821554,0.000029611241,0.00003180442,0.0019138268,0.00003203883,0.007518919],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998412,0.000021015327,0.000013612751,0.000038882215,0.000048751834,0.000036493348],"domain_scores_gemma":[0.99988973,0.000007176857,0.000026425243,0.000013907407,0.000023021661,0.000039760795],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014667485,0.00024577547,0.00021969537,0.0002829633,0.0004448061,0.0003261076,0.00026447428,0.00041809643,0.00226161],"category_scores_gemma":[0.00014063921,0.00017538382,0.00037573685,0.00013655658,0.00016585461,0.00027044074,0.00049324846,0.00061238825,0.0011018829],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011517132,0.000014872663,0.0008481259,0.000052670322,0.000013552941,0.00014165598,0.000016522194,0.00004641287,0.9952916,0.00025208225,0.0002622801,0.0029451386],"study_design_scores_gemma":[0.00003763368,0.00018167724,0.02444407,0.000019662144,0.000048693753,0.0016573332,0.00009171488,0.0032868239,0.952368,0.00034784578,0.017502803,0.000013810424],"about_ca_topic_score_codex":0.0003657312,"about_ca_topic_score_gemma":0.0006172186,"teacher_disagreement_score":0.00226161,"about_ca_system_score_codex":0.00050510233,"about_ca_system_score_gemma":0.00028314057,"threshold_uncertainty_score":0.007565856},"labels":[],"label_agreement":null},{"id":"W2023028617","doi":"10.1016/j.cyto.2008.07.378","title":"295 Membrane fusion activates interferon regulatory factor 3","year":2008,"lang":"en","type":"article","venue":"Cytokine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Fusion; Cell biology; Factor (programming language); Chemistry; Interferon regulatory factors; Biology; Computer science; Biochemistry; Transcription factor; Gene; Philosophy","score_opus":0.02124241155828546,"score_gpt":0.23562292372862337,"score_spread":0.2143805121703379,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023028617","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97849077,0.0020099145,0.006248601,0.0006086808,0.00022406054,0.000048786453,0.00046041587,0.00012855565,0.011780241],"genre_scores_gemma":[0.9944125,0.0004197142,0.0012313038,0.00017955858,0.000031420826,0.000014172746,0.0006017055,0.000018440498,0.0030912582],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998078,0.000045524375,0.0000075937587,0.000022293452,0.000033935412,0.00008288735],"domain_scores_gemma":[0.99990034,0.00003974833,0.000014340641,0.000013710897,0.00001008084,0.000021772272],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018208896,0.00037554366,0.0002013383,0.0002533428,0.00034133022,0.0006051989,0.00016860034,0.000515289,0.004570932],"category_scores_gemma":[0.0002584136,0.00012681271,0.0004653222,0.00012838286,0.00022063707,0.00037234952,0.0005191772,0.00069613574,0.0020723457],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004962923,0.000037589063,0.00025710184,0.000021725811,0.0000060880866,0.00024460358,0.000021171309,0.00013202662,0.9952331,0.0012722723,0.00031290972,0.001965204],"study_design_scores_gemma":[0.00011958628,0.00025476655,0.0046306504,0.00001830747,0.000012143039,0.0009025069,0.0001584146,0.0031478333,0.97972053,0.0014388512,0.009583207,0.000013163407],"about_ca_topic_score_codex":0.00024930693,"about_ca_topic_score_gemma":0.0001906855,"teacher_disagreement_score":0.004570932,"about_ca_system_score_codex":0.00056496816,"about_ca_system_score_gemma":0.00013143374,"threshold_uncertainty_score":0.015291274},"labels":[],"label_agreement":null},{"id":"W2023388424","doi":"10.1073/pnas.0804895105","title":"RIG-I plays a critical role in negatively regulating granulocytic proliferation","year":2008,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"E-Institutes of Shanghai Municipal Education Commission; Shanghai Municipal Education Commission; Strong; University of Pennsylvania; Samuel Waxman Cancer Research Foundation","keywords":"Myelopoiesis; Myeloid; Biology; Cell biology; Myeloproliferative Disorders; Regulator; Innate immune system; Myeloid cells; Immunity; Gene; Immunology; Haematopoiesis; Genetics; Immune system; Stem cell","score_opus":0.039853858772790865,"score_gpt":0.3049077088772956,"score_spread":0.2650538501045048,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023388424","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8725525,0.07166726,0.026922842,0.0012776454,0.00024943947,0.00011970863,0.0016507279,0.0009309239,0.02462894],"genre_scores_gemma":[0.9846918,0.007319941,0.003957504,0.0001210756,0.00004737244,0.000025121024,0.0005205073,0.00002934708,0.003287379],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99973446,0.000065955624,0.000023703686,0.00004340708,0.00006471374,0.00006777713],"domain_scores_gemma":[0.99981314,0.000031175456,0.000059774593,0.00003252449,0.000018993203,0.000044446344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033306022,0.00057395815,0.0002589945,0.00032218147,0.00021781777,0.0005492299,0.00023206735,0.0003339878,0.001756595],"category_scores_gemma":[0.00021993261,0.000107384476,0.00030862392,0.00016407245,0.00055541453,0.00030899193,0.000422211,0.00064513966,0.0012866302],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011838883,0.000019522882,0.0005663358,0.00007224263,0.0000070984133,0.00012028106,0.000021339121,0.000087040076,0.991055,0.0006540151,0.00013245651,0.00714627],"study_design_scores_gemma":[0.000026726586,0.0003115304,0.01154278,0.000044804303,0.000032095522,0.00124849,0.000070877686,0.0007071704,0.9726836,0.0008035429,0.012514863,0.000013611241],"about_ca_topic_score_codex":0.00020287262,"about_ca_topic_score_gemma":0.00020443984,"teacher_disagreement_score":0.001756595,"about_ca_system_score_codex":0.0004368432,"about_ca_system_score_gemma":0.00031340722,"threshold_uncertainty_score":0.005876422},"labels":[],"label_agreement":null},{"id":"W2023664577","doi":"10.1007/s11481-010-9256-1","title":"Tetherin and Its Viral Antagonists","year":2011,"lang":"en","type":"review","venue":"Journal of Neuroimmune Pharmacology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Tetherin; Interferon; Innate immune system; ISG15; Biology; Virology; SAMHD1; Viral envelope; Interferon type I; Virus; Immunology; Immune system; RNA; Genetics; Gene","score_opus":0.06885006686902088,"score_gpt":0.36211809905653364,"score_spread":0.29326803218751274,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023664577","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00078415027,0.99619746,0.00032194835,0.0002843404,0.00020983908,0.0000060895645,0.000019601364,0.000010618495,0.0021660223],"genre_scores_gemma":[0.0057547037,0.9886142,0.0004506444,0.0002585086,0.00025973632,0.000017531105,0.00006831179,0.0000025616418,0.004573847],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99993086,0.000010062054,0.000006784422,0.000011456671,0.000030811647,0.000010025407],"domain_scores_gemma":[0.99994993,0.00001672021,0.000009319477,0.0000020392824,0.000013837792,0.0000081975895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015741779,0.0004159729,0.0006481715,0.0008253119,0.00019711377,0.00059149525,0.00044258602,0.00075469725,0.0020148896],"category_scores_gemma":[0.0001700163,0.00016457292,0.00017849158,0.0006202482,0.00027752196,0.0006955453,0.0003535134,0.001140809,0.0016242014],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007575499,0.000068956826,0.00022695796,0.0058583426,0.00004111012,0.00032158478,0.00006812454,0.00030790924,0.029470567,0.007449085,0.015220579,0.940891],"study_design_scores_gemma":[0.000009705306,0.00009762066,0.0010755399,0.00043566013,0.00003408269,0.0016107172,0.000038659917,0.00010552089,0.0057303566,0.0014874119,0.98936,0.000014822595],"about_ca_topic_score_codex":0.0004903801,"about_ca_topic_score_gemma":0.0010916465,"teacher_disagreement_score":0.0020148896,"about_ca_system_score_codex":0.00037197824,"about_ca_system_score_gemma":0.00033740798,"threshold_uncertainty_score":0.006740451},"labels":[],"label_agreement":null},{"id":"W2024303005","doi":"10.1182/blood-2007-10-117861","title":"Hematopoietic cell–derived interferon controls viral replication and virus-induced disease","year":2008,"lang":"en","type":"article","venue":"Blood","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research","funders":"Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Virology; Viral replication; Interferon; Hematopoietic cell; Virus; Biology; Haematopoiesis; Disease; Immunology; Medicine; Stem cell; Genetics","score_opus":0.014630739995514966,"score_gpt":0.23142900600602104,"score_spread":0.21679826601050606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024303005","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98862773,0.0048847008,0.0034467485,0.00008130243,0.000027547925,0.00002459863,0.00017808724,0.00012801113,0.0026012163],"genre_scores_gemma":[0.99554706,0.0010035877,0.0016093904,0.00003184278,0.000016331123,0.00001796105,0.00014161521,0.000019700825,0.0016125307],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979097,0.000053279167,0.000014408655,0.000045111137,0.000043416403,0.000052843123],"domain_scores_gemma":[0.9998659,0.000021323196,0.00004586729,0.000020706331,0.000010882288,0.000035376368],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020036296,0.0003681728,0.00024264868,0.00023865931,0.0001085407,0.0003421871,0.00016648775,0.00023889243,0.0007574853],"category_scores_gemma":[0.00014669933,0.00010686473,0.0001139672,0.00010649618,0.00028348822,0.00016689258,0.00022853087,0.00045505923,0.00029532096],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013761103,0.000020780775,0.0005688598,0.000017713752,0.0000028785632,0.00005332216,0.00001235755,0.000059451195,0.99622065,0.00032418894,0.00003548771,0.0025467344],"study_design_scores_gemma":[0.000055809738,0.00041549522,0.013059924,0.000023881747,0.000035498015,0.0006716886,0.000043657514,0.0016867217,0.9791919,0.0004682698,0.0043408647,0.0000063404527],"about_ca_topic_score_codex":0.00019458035,"about_ca_topic_score_gemma":0.00024026871,"teacher_disagreement_score":0.0007574853,"about_ca_system_score_codex":0.00029542964,"about_ca_system_score_gemma":0.00017557037,"threshold_uncertainty_score":0.0025340319},"labels":[],"label_agreement":null},{"id":"W2024894588","doi":"10.1096/fj.07-9198com","title":"Rapid detection, discovery, and identification of post‐translationally myristoylated proteins during apoptosis using a bio‐orthogonal azidomyristate analog","year":2007,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":111,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institutes of Health; Alberta Heritage Foundation for Medical Research; National Institute of General Medical Sciences; Alberta Cancer Board; Howard Hughes Medical Institute","keywords":"Myristoylation; Chemistry; Biochemistry; Ubiquitin ligase; Caspase; DNA ligase; Cysteine; Cell biology; Apoptosis; Ubiquitin; Phosphorylation; Biology; Programmed cell death; Enzyme; Gene","score_opus":0.011547733516812703,"score_gpt":0.23818909871937163,"score_spread":0.22664136520255893,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024894588","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98459715,0.0007374354,0.013615742,0.000071280076,0.0000119069955,0.00002820288,0.00018765511,0.000079529054,0.00067118485],"genre_scores_gemma":[0.9826118,0.0009319567,0.014252344,0.000050914445,0.0000060519646,0.00004153852,0.000369945,0.000017074577,0.0017184298],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985206,0.000018221197,0.000010475685,0.000041442803,0.000049952723,0.00002783997],"domain_scores_gemma":[0.99989915,0.000016391134,0.00004068293,0.000011309822,0.00001556473,0.00001690122],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016304082,0.00029442555,0.00015715144,0.0001831693,0.0001433122,0.00022385753,0.00018364952,0.00027721835,0.00053630426],"category_scores_gemma":[0.00012757877,0.00012733969,0.00020323775,0.00015141412,0.00018133612,0.00016644537,0.00016085673,0.00043362528,0.00028933375],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026394762,0.0000045815236,0.0000876193,0.000009575417,0.000001224576,0.0000114248405,0.0000052606933,0.000012909227,0.99945194,0.000021813601,0.000004489941,0.00036281295],"study_design_scores_gemma":[0.0000022414697,0.000048186237,0.0007966437,9.691186e-7,0.0000030003075,0.00008147919,0.000004660975,0.00022434459,0.99856985,0.000009774133,0.00025763043,0.0000011467878],"about_ca_topic_score_codex":0.00030630294,"about_ca_topic_score_gemma":0.00055881514,"teacher_disagreement_score":0.00053630426,"about_ca_system_score_codex":0.00029669222,"about_ca_system_score_gemma":0.00019173052,"threshold_uncertainty_score":0.0021526814},"labels":[],"label_agreement":null},{"id":"W2025656644","doi":"10.1007/s00239-005-0046-y","title":"Phylogenetic Analysis Reveals a Novel Protein Family Closely Related to Adenosine Deaminase","year":2005,"lang":"en","type":"article","venue":"Journal of Molecular Evolution","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":75,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; AMP deaminase; Intron; Phylogenetic tree; Adenosine deaminase; Phylogenetics; Genetics; Gene; Amino acid; Biochemistry; Adenosine","score_opus":0.00702522736132441,"score_gpt":0.242123488908036,"score_spread":0.2350982615467116,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025656644","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98554486,0.0023343384,0.008032801,0.00025832021,0.000078554614,0.000053308966,0.0010776182,0.000118482785,0.0025016824],"genre_scores_gemma":[0.9769011,0.0014995749,0.0138544375,0.00030140008,0.00009805037,0.000051045234,0.00494092,0.00005137675,0.0023021149],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986625,0.000020830721,0.000009549868,0.000041933912,0.000026062675,0.000035366564],"domain_scores_gemma":[0.9993724,0.00018126139,0.00011483435,0.00006490771,0.000090486596,0.00017599933],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002675504,0.00051984546,0.0007919627,0.0012084623,0.00090342015,0.0006987246,0.0003856961,0.00074972893,0.0014232526],"category_scores_gemma":[0.000430005,0.00020233479,0.00063238124,0.0012761707,0.00037805107,0.0005047553,0.0002977222,0.0011223124,0.0011593611],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00078768894,0.00014793547,0.009158027,0.0001781346,0.000070331196,0.001148628,0.00024065394,0.00045628517,0.972202,0.00059161836,0.00035439478,0.014664264],"study_design_scores_gemma":[0.00020590295,0.0020518592,0.5471364,0.00027334326,0.0008377646,0.030688781,0.0019716697,0.028809411,0.3011641,0.00310442,0.08358673,0.00016957616],"about_ca_topic_score_codex":0.0007946687,"about_ca_topic_score_gemma":0.0006684029,"teacher_disagreement_score":0.0014232526,"about_ca_system_score_codex":0.00034928755,"about_ca_system_score_gemma":0.00032062762,"threshold_uncertainty_score":0.004761219},"labels":[],"label_agreement":null},{"id":"W2025861570","doi":"10.1016/j.cytogfr.2014.07.002","title":"Danger, diversity and priming in innate antiviral immunity","year":2014,"lang":"en","type":"review","venue":"Cytokine & Growth Factor Reviews","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Innate immune system; Biology; Pattern recognition receptor; IRF3; Priming (agriculture); Immunology; Immune system; SAMHD1; RIG-I; Viral replication; Cell biology; Virus; Virology; Gene; Genetics","score_opus":0.06820625249041432,"score_gpt":0.3173136484457261,"score_spread":0.2491073959553118,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025861570","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008463081,0.99828243,0.00015455918,0.00023059799,0.0004875076,0.0000031542613,0.000010451551,0.0000054740935,0.00074108364],"genre_scores_gemma":[0.0005924775,0.9976463,0.00015580878,0.00019028038,0.00063981925,0.000005657933,0.0000210158,0.0000012307247,0.0007474408],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999821,0.000025626125,0.00002237108,0.000029571085,0.00007717039,0.000024286679],"domain_scores_gemma":[0.9997601,0.00010069921,0.000037495076,0.000008841418,0.000053938144,0.00003884322],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072523137,0.00093935477,0.0011520891,0.0012239085,0.0002754524,0.0013433599,0.0008876362,0.0012350861,0.0029189277],"category_scores_gemma":[0.0006992799,0.00031044736,0.00025814815,0.0017831662,0.00081737695,0.0017673487,0.00089303585,0.0020823504,0.001903059],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011719136,0.00004820701,0.00014696301,0.008470205,0.000044291606,0.00014310548,0.00005456655,0.00033761366,0.0037297418,0.0064426465,0.052166678,0.9282988],"study_design_scores_gemma":[0.000020741933,0.000043409244,0.00060507824,0.0015259542,0.000046329093,0.0005644007,0.00004982897,0.00008718883,0.0004343591,0.0041447175,0.9924629,0.00001517006],"about_ca_topic_score_codex":0.0006217145,"about_ca_topic_score_gemma":0.0012362666,"teacher_disagreement_score":0.0029189277,"about_ca_system_score_codex":0.0006732117,"about_ca_system_score_gemma":0.001148337,"threshold_uncertainty_score":0.009764791},"labels":[],"label_agreement":null},{"id":"W2027422652","doi":"10.1016/j.imbio.2007.09.003","title":"Matrix protein mediated shutdown of host cell metabolism limits vesicular stomatitis virus-induced interferon-alpha responses to plasmacytoid dendritic cells","year":2007,"lang":"en","type":"article","venue":"Immunobiology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Vesicular stomatitis virus; Biology; Interferon; Virology; Plasmacytoid dendritic cell; Virus; Viral replication; RNA; Alpha interferon; Cell biology; Dendritic cell; Immune system; Gene; Immunology; Genetics","score_opus":0.011263711523511376,"score_gpt":0.2618275366247748,"score_spread":0.25056382510126346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027422652","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99556243,0.0011264771,0.0019411717,0.00009858891,0.00004382072,0.000013856691,0.00010443138,0.000052945863,0.0010564325],"genre_scores_gemma":[0.9979715,0.00020101269,0.000845263,0.000023993627,0.000011666793,0.000010656382,0.000112468035,0.000010801087,0.0008126172],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998734,0.000025244808,0.000008360657,0.000024221683,0.00002581182,0.00004288491],"domain_scores_gemma":[0.99983275,0.000056074292,0.000030819472,0.000021065714,0.000018378329,0.00004088781],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015238454,0.00020466842,0.0002788026,0.00012014747,0.0001695103,0.00054860656,0.00016007212,0.00028900403,0.0009184605],"category_scores_gemma":[0.00016446826,0.000119683566,0.00015749542,0.000068662164,0.0002557727,0.0002554084,0.00023453218,0.0006273513,0.0003168266],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009584616,0.000007496513,0.000055889883,0.0000078818675,0.0000011377356,0.000009558997,0.000004186735,0.000020827858,0.99933606,0.00008789963,0.000013442603,0.00035960364],"study_design_scores_gemma":[0.000013265521,0.00020568087,0.0022656107,0.000002528825,0.000007434076,0.00007787744,0.000024911002,0.0011922795,0.9952626,0.000078807534,0.00086664443,0.0000022569036],"about_ca_topic_score_codex":0.0003492889,"about_ca_topic_score_gemma":0.00061154895,"teacher_disagreement_score":0.0009184605,"about_ca_system_score_codex":0.0004251743,"about_ca_system_score_gemma":0.00022984704,"threshold_uncertainty_score":0.003084898},"labels":[],"label_agreement":null},{"id":"W2028170369","doi":"10.1128/jvi.01828-12","title":"The N-Terminal Region of IFITM3 Modulates Its Antiviral Activity by Regulating IFITM3 Cellular Localization","year":2012,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":189,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Biology; Endosome; Transmembrane protein; Amino acid; Virology; Virus; Cell biology; Influenza A virus; Viral replication; Mutant; Interferon; Cell; Genetics; Gene; Receptor","score_opus":0.014655846848256505,"score_gpt":0.2500372413435881,"score_spread":0.23538139449533163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028170369","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998779,0.00023754283,0.00051220757,0.000048693302,0.000008327924,0.0000040977898,0.00007211175,0.000008590192,0.00032927986],"genre_scores_gemma":[0.9991881,0.00006734974,0.0004059937,0.000027742213,0.000003032373,0.000005143386,0.0000832528,0.0000038045362,0.0002156606],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999342,0.000012404892,0.000006000376,0.0000104400615,0.000010866189,0.000026144957],"domain_scores_gemma":[0.99994135,0.0000114471795,0.000016927308,0.000005945575,0.000006674458,0.00001766882],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008056975,0.00013797436,0.00011900167,0.00005254704,0.00014543704,0.00014715733,0.00011073719,0.00022271599,0.0010447894],"category_scores_gemma":[0.0001572144,0.000052626976,0.00018094768,0.00005267663,0.00017620483,0.00010487008,0.00010694557,0.00037193,0.00027131548],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018925339,0.000008619926,0.00047490734,0.000007693953,0.0000023606597,0.00004950307,0.000005553635,0.000032017382,0.9984812,0.000035883288,0.000020632682,0.00069228583],"study_design_scores_gemma":[0.000052595165,0.00025024265,0.022310868,0.000007029475,0.000019779904,0.00068730325,0.00004100857,0.0012497084,0.97382504,0.000101791964,0.001449497,0.000005164943],"about_ca_topic_score_codex":0.0003738523,"about_ca_topic_score_gemma":0.00043593277,"teacher_disagreement_score":0.0010447894,"about_ca_system_score_codex":0.00025931915,"about_ca_system_score_gemma":0.00013871718,"threshold_uncertainty_score":0.0034951568},"labels":[],"label_agreement":null},{"id":"W2028701745","doi":"10.1371/journal.ppat.1000930","title":"Requirement of NOX2 and Reactive Oxygen Species for Efficient RIG-I-Mediated Antiviral Response through Regulation of MAVS Expression","year":2010,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":139,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research; King's College London; McGill University","keywords":"Biology; RIG-I; Cell biology; Innate immune system; NADPH oxidase; Reactive oxygen species; MDA5; Signal transducing adaptor protein; Viral replication; Mitochondrion; Mitochondrial ROS; RNA interference; Signal transduction; Gene; Immune system; Virus; Genetics; RNA","score_opus":0.022202471575497883,"score_gpt":0.25388793878984944,"score_spread":0.23168546721435157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028701745","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99136776,0.0021597063,0.0040113917,0.00021682946,0.000049577146,0.000016920072,0.000255885,0.000059338337,0.0018624945],"genre_scores_gemma":[0.99496704,0.00037671358,0.0019117525,0.000045350735,0.000015687929,0.000028556016,0.0004982954,0.000019184477,0.0021374],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997582,0.000061188046,0.000022012448,0.000039462288,0.00005924195,0.000059851394],"domain_scores_gemma":[0.9998274,0.000020782587,0.00004472109,0.00003344071,0.000022988525,0.000050689025],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003106028,0.0002875726,0.00020498931,0.00013912718,0.00013769651,0.00044467975,0.00023724523,0.00026336938,0.001330754],"category_scores_gemma":[0.00020718557,0.00012450737,0.00019760436,0.0000937822,0.00023847418,0.00035418844,0.0002985647,0.00034366397,0.00046049966],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017243007,0.00002103926,0.00029196075,0.000021324715,0.000003133318,0.00008246888,0.00000826006,0.000031903233,0.99852294,0.00032124043,0.00003200028,0.00049126515],"study_design_scores_gemma":[0.000034256125,0.00017438173,0.012304147,0.000007237157,0.000013365829,0.0010622842,0.00005801368,0.002503844,0.9784832,0.00045471583,0.0048973938,0.000007103454],"about_ca_topic_score_codex":0.00022177494,"about_ca_topic_score_gemma":0.00025272035,"teacher_disagreement_score":0.001330754,"about_ca_system_score_codex":0.00032780578,"about_ca_system_score_gemma":0.00026227933,"threshold_uncertainty_score":0.004451871},"labels":[],"label_agreement":null},{"id":"W2030502071","doi":"10.2217/fvl.13.130","title":"Biophysical Approaches to Entry Inhibitor Antivirals with a Broad Spectrum of Action","year":2014,"lang":"en","type":"article","venue":"Future Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; Burroughs Wellcome Fund","keywords":"Infectivity; Small molecule; Viral envelope; Drug discovery; Antiviral drug; Drug development; Envelope (radar); In vivo; Drug; Broad spectrum; Computational biology; Biology; Viral entry; Chemistry; Virology; Cell biology; Virus; Biochemistry; Viral replication; Pharmacology; Computer science; Genetics; Combinatorial chemistry","score_opus":0.023705211995116993,"score_gpt":0.22355275155395737,"score_spread":0.19984753955884038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2030502071","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39289758,0.12259664,0.41341978,0.007604812,0.0018315094,0.0012977188,0.00061612896,0.0015825577,0.058153216],"genre_scores_gemma":[0.7999137,0.073427305,0.092907846,0.0032767926,0.00055865577,0.0011764108,0.00050374167,0.0002113552,0.028024154],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99971527,0.00006942267,0.000016958427,0.00004529481,0.00009921367,0.00005377045],"domain_scores_gemma":[0.9998197,0.000051989005,0.00003932331,0.000024398705,0.000034949837,0.000029708137],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051603734,0.0006200706,0.0005054267,0.00055865134,0.00034033752,0.0007007572,0.0005011196,0.0007429166,0.003010319],"category_scores_gemma":[0.0003834559,0.0004444632,0.00056995545,0.0002619587,0.0006119556,0.0008735516,0.0007138175,0.0023468896,0.0013326831],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013244883,0.00025348947,0.00009212389,0.00029564137,0.000019037438,0.000092402464,0.00004658578,0.00060510694,0.9679358,0.0080687925,0.00053994864,0.021918526],"study_design_scores_gemma":[0.00014131746,0.0014968714,0.00067953457,0.00007216702,0.00004871274,0.0005122962,0.00006476306,0.002929276,0.9215,0.0039962563,0.068522826,0.0000361079],"about_ca_topic_score_codex":0.00026885656,"about_ca_topic_score_gemma":0.00048852793,"teacher_disagreement_score":0.003010319,"about_ca_system_score_codex":0.0007188935,"about_ca_system_score_gemma":0.00045708887,"threshold_uncertainty_score":0.010070562},"labels":[],"label_agreement":null},{"id":"W2030870757","doi":"10.1038/leu.2013.287","title":"Delineating MEIS1 cis-regulatory elements active in hematopoietic cells","year":2013,"lang":"en","type":"letter","venue":"Leukemia","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia; BC Cancer Agency","funders":"Biotechnology and Biological Sciences Research Council; Medical Research Council; Canadian Institutes of Health Research; Terry Fox Foundation; National Centre for the Replacement, Refinement and Reduction of Animals in Research; Cancer Research UK; Wellcome Trust","keywords":"Haematopoiesis; Hematology; Hematopoietic cell; Cancer research; Biology; Immunology; Stem cell; Genetics","score_opus":0.011404650554669995,"score_gpt":0.23410825871722216,"score_spread":0.22270360816255216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2030870757","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09131441,0.02241303,0.011454417,0.8141621,0.031301305,0.00017265223,0.00068299606,0.0003607807,0.02813849],"genre_scores_gemma":[0.52823305,0.012807967,0.013815743,0.3670694,0.044314165,0.00036123514,0.00072568783,0.00014318943,0.032529645],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996835,0.00007179692,0.000038437345,0.00004968549,0.0000755404,0.0000809545],"domain_scores_gemma":[0.9995852,0.00025300152,0.000029108896,0.00003101458,0.00004518456,0.000056533623],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005924547,0.00031210837,0.00045441595,0.00025291802,0.0007391833,0.00077346707,0.0005604391,0.00485804,0.003273575],"category_scores_gemma":[0.0012602967,0.00018657216,0.00035104016,0.00014801662,0.000955183,0.0005231587,0.00041670934,0.00626269,0.00122256],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0052545876,0.0003918178,0.008072817,0.0008085333,0.00007425832,0.026920317,0.00064675475,0.0011093541,0.30018705,0.02621931,0.4458193,0.184496],"study_design_scores_gemma":[0.00057326345,0.00037152728,0.006756246,0.00017144035,0.000096250515,0.020546574,0.0008450791,0.0036156771,0.15308595,0.026646301,0.7872337,0.000057974048],"about_ca_topic_score_codex":0.00054584915,"about_ca_topic_score_gemma":0.0012742382,"teacher_disagreement_score":0.00485804,"about_ca_system_score_codex":0.0011383335,"about_ca_system_score_gemma":0.00039232837,"threshold_uncertainty_score":0.010951221},"labels":[],"label_agreement":null},{"id":"W2032605394","doi":"10.1158/1538-7445.am10-140","title":"Abstract 140: XIAP expression in non-small cell lung cancer cells is a key determinant of threshold to TRAIL-induced apoptotic cell death","year":2010,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"XIAP; Apoptosis; Cancer research; Transfection; Programmed cell death; clone (Java method); Molecular biology; Inhibitor of apoptosis; Cell culture; Biology; Western blot; Lung cancer; Cell; Chemistry; Caspase; Medicine; Oncology; Genetics; Gene","score_opus":0.04561546925232161,"score_gpt":0.359838540275207,"score_spread":0.3142230710228854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032605394","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98415,0.004421593,0.0042606434,0.000189862,0.00006631112,0.000051941384,0.0025766005,0.00016737168,0.0041157138],"genre_scores_gemma":[0.985686,0.0017986075,0.0017356502,0.00006627921,0.000028389564,0.00005604315,0.0036605943,0.000026144615,0.0069423225],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998584,0.000013916378,0.000019917035,0.000033660504,0.000051752577,0.000022435372],"domain_scores_gemma":[0.99991333,0.0000140340035,0.00002638842,0.0000100312955,0.000015321739,0.00002088589],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009590851,0.00031719593,0.00023947556,0.00015333574,0.00018523987,0.00034985595,0.00021672479,0.0002587087,0.004920722],"category_scores_gemma":[0.00011679288,0.00011385184,0.00019037157,0.0002759584,0.00017495074,0.00025567226,0.00018156986,0.00049562665,0.0014052812],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010742393,0.00001678282,0.00034190653,0.000057564906,0.000002668535,0.00007054554,0.0000063214334,0.000015958936,0.9981694,0.00007264876,0.00008096074,0.0010578466],"study_design_scores_gemma":[0.00002105603,0.00020522076,0.01027678,0.0000072882563,0.00001592105,0.0007176956,0.000017349726,0.00043675755,0.9853741,0.00005934588,0.0028651168,0.0000033738418],"about_ca_topic_score_codex":0.00049643207,"about_ca_topic_score_gemma":0.00032723253,"teacher_disagreement_score":0.004920722,"about_ca_system_score_codex":0.00037099,"about_ca_system_score_gemma":0.0003238373,"threshold_uncertainty_score":0.016461432},"labels":[],"label_agreement":null},{"id":"W2033143377","doi":"10.1111/j.1399-0004.2011.01825.x","title":"Aicardi–Goutieres syndrome: from patients to genes and beyond","year":2011,"lang":"en","type":"review","venue":"Clinical Genetics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto; University of New Brunswick","funders":"Canadian Institutes of Health Research","keywords":"Immunology; Innate immune system; Gene; Immunodeficiency Syndrome; Immunodeficiency; Immune system; Medicine; Biology; Virology; Genetics","score_opus":0.08486390296140069,"score_gpt":0.3710672622153151,"score_spread":0.28620335925391444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033143377","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00028123276,0.99747294,0.00014911052,0.00084157515,0.00030655717,0.000002021635,0.000007726341,0.000011036547,0.00092776015],"genre_scores_gemma":[0.0021702766,0.9947507,0.00022901515,0.0009623613,0.00063463015,0.0000058305814,0.000026320535,0.0000035363726,0.0012174485],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998642,0.000029909766,0.000023020766,0.00003028237,0.00003385076,0.000018669152],"domain_scores_gemma":[0.999841,0.00007476245,0.00002098524,0.0000075534545,0.000031013937,0.00002469635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003088167,0.0011532145,0.0014864497,0.0016587371,0.00030433346,0.00075327384,0.0008322004,0.0015297637,0.0020038385],"category_scores_gemma":[0.0005658792,0.00024383728,0.00032781548,0.0015703755,0.00079937105,0.0013923927,0.00063615694,0.0018912436,0.0014686952],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010864986,0.000065689455,0.00078721094,0.004449426,0.00007187045,0.0048781335,0.00015335111,0.0004341003,0.0016887464,0.0032452312,0.06204623,0.92207146],"study_design_scores_gemma":[0.000053379626,0.000086198714,0.0026875208,0.0034321717,0.00010591303,0.03925772,0.0001964134,0.00014170905,0.0005181802,0.0058545596,0.9476319,0.000034328474],"about_ca_topic_score_codex":0.000946295,"about_ca_topic_score_gemma":0.0014868695,"teacher_disagreement_score":0.0020038385,"about_ca_system_score_codex":0.00060897693,"about_ca_system_score_gemma":0.00058617844,"threshold_uncertainty_score":0.0067035556},"labels":[],"label_agreement":null},{"id":"W2034863440","doi":"10.1371/journal.pone.0025674","title":"Improved NYVAC-Based Vaccine Vectors","year":2011,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Sanofi Pasteur; Sanofi; Bill and Melinda Gates Foundation","keywords":"Vaccinia; Virology; Virus; Biology; Viral replication; Modified vaccinia Ankara; Poxviridae; Interferon; Vector (molecular biology); Transduction (biophysics); Gene; Genetics; Recombinant DNA","score_opus":0.04714560509650858,"score_gpt":0.21272272464095845,"score_spread":0.16557711954444987,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034863440","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92029715,0.005531504,0.059494372,0.000501079,0.00040732892,0.0010769869,0.003780432,0.0005724079,0.008338735],"genre_scores_gemma":[0.81756574,0.0052300175,0.12811846,0.00019090867,0.00009447258,0.0006441976,0.015887043,0.000308137,0.031960975],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995913,0.000075887234,0.00006518634,0.00007277272,0.00014384421,0.000051084997],"domain_scores_gemma":[0.9997991,0.000036474416,0.00006543935,0.00002927734,0.000039543018,0.00003022042],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003882474,0.0004977384,0.000325818,0.00045219297,0.00017569214,0.00051707675,0.0006218161,0.00047908074,0.0021028325],"category_scores_gemma":[0.00035387135,0.0002026756,0.0003136314,0.0002314237,0.00024847873,0.00047613517,0.0003430018,0.0014975436,0.0010573051],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022919093,0.000092670154,0.00018644611,0.0001281264,0.000011531716,0.000059082347,0.00003770172,0.00033061078,0.9899228,0.0015538376,0.0002763453,0.0071716635],"study_design_scores_gemma":[0.00006232009,0.000665268,0.0018305718,0.000032355667,0.000051292747,0.0006544923,0.00003170082,0.0025096217,0.9614806,0.00019837741,0.03246305,0.00002031154],"about_ca_topic_score_codex":0.0005116804,"about_ca_topic_score_gemma":0.00088773854,"teacher_disagreement_score":0.0021028325,"about_ca_system_score_codex":0.0006014535,"about_ca_system_score_gemma":0.00032861935,"threshold_uncertainty_score":0.0070346594},"labels":[],"label_agreement":null},{"id":"W2035232303","doi":"10.1038/nature14156","title":"Mitochondrial DNA stress primes the antiviral innate immune response","year":2015,"lang":"en","type":"article","venue":"Nature","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1888,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Center for Advancing Translational Sciences; National Institute of Diabetes and Digestive and Kidney Diseases; National Institute on Aging; Canadian Institutes of Health Research; National Institute of Environmental Health Sciences; National Institute of Allergy and Infectious Diseases","keywords":"IRF3; Biology; TFAM; Mitochondrial DNA; Interferon; Innate immune system; Cell biology; Mitochondrion; Integrated stress response; Stimulator of interferon genes; Interferon type I; Genetics; Immune system; Gene; Translation (biology); Messenger RNA","score_opus":0.009855854665807557,"score_gpt":0.2624385242027895,"score_spread":0.25258266953698194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035232303","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96420336,0.010672665,0.007577174,0.0040187873,0.0014747778,0.000040522853,0.0006435501,0.00027562212,0.011093371],"genre_scores_gemma":[0.993626,0.0011509114,0.00070354313,0.00024588977,0.0001896463,0.000011257316,0.00023681903,0.000014527511,0.0038214352],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998142,0.000035588386,0.00000877714,0.000040923645,0.000041769606,0.000058739217],"domain_scores_gemma":[0.999683,0.000055462086,0.00006551605,0.000045651203,0.000044225566,0.000106136555],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025960463,0.00031508162,0.00023153448,0.00016750637,0.00023685987,0.0005772177,0.00012564672,0.0006002185,0.005459826],"category_scores_gemma":[0.00028751037,0.0001386011,0.0002035624,0.00006393648,0.00030642154,0.00056951697,0.00039235567,0.0009968551,0.0009635221],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008950503,0.000042757816,0.0008376897,0.00007477712,0.00000862824,0.00011095696,0.00003389306,0.00013142455,0.9891332,0.001924578,0.0007517517,0.006055341],"study_design_scores_gemma":[0.00015485795,0.001432062,0.038468778,0.00009648758,0.000034407283,0.001189312,0.0004961587,0.0027908573,0.9183944,0.008427414,0.02848333,0.00003202252],"about_ca_topic_score_codex":0.000103060636,"about_ca_topic_score_gemma":0.00021288026,"teacher_disagreement_score":0.005459826,"about_ca_system_score_codex":0.00051797257,"about_ca_system_score_gemma":0.0002632988,"threshold_uncertainty_score":0.01826489},"labels":[],"label_agreement":null},{"id":"W2035339932","doi":"10.1371/journal.pone.0094999","title":"Functionally Distinct Effects of the C-Terminal Regions of IKKε and TBK1 on Type I IFN Production","year":2014,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ministry of Education, Culture, Sports, Science and Technology; McGill University","keywords":"IκB kinase; TANK-binding kinase 1; Kinase; Innate immune system; Cell biology; Phosphorylation; Biology; Transcription factor; Signal transduction; Biochemistry; NF-κB; Immune system; Genetics; Protein kinase A; MAP kinase kinase kinase; Gene","score_opus":0.01832880959762673,"score_gpt":0.20444988142608025,"score_spread":0.18612107182845353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035339932","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984457,0.00056210015,0.00054358545,0.000026345338,0.000016193539,0.000006197334,0.00011775765,0.000006741059,0.00027546284],"genre_scores_gemma":[0.99780995,0.00028329046,0.0010434388,0.00003093347,0.0000045228467,0.000020417774,0.00036105842,0.000010379415,0.00043593848],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997912,0.000043235683,0.000028318225,0.00004117952,0.000032501703,0.00006355125],"domain_scores_gemma":[0.999777,0.000058826332,0.000057682424,0.00002744312,0.000013740777,0.00006533626],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002474706,0.0003663019,0.00021910755,0.00013771188,0.00011745595,0.0002159171,0.00032244358,0.00025213577,0.001140349],"category_scores_gemma":[0.00024656032,0.0001590462,0.00033529068,0.00012569058,0.0003788222,0.00024627557,0.0001692974,0.00063358503,0.0002349899],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048881036,0.00003340771,0.00011712148,0.000025237287,0.0000037341442,0.000027054051,0.0000069750295,0.00006425603,0.9988932,0.00005121702,0.00000638912,0.00028265],"study_design_scores_gemma":[0.00003297684,0.0002841696,0.003182412,0.000005048537,0.00001911752,0.00017649523,0.00002268697,0.00061388133,0.99518615,0.00003904987,0.00043331992,0.0000046564023],"about_ca_topic_score_codex":0.00040234788,"about_ca_topic_score_gemma":0.0003807868,"teacher_disagreement_score":0.001140349,"about_ca_system_score_codex":0.00030639814,"about_ca_system_score_gemma":0.00020667438,"threshold_uncertainty_score":0.003814876},"labels":[],"label_agreement":null},{"id":"W2035422548","doi":"10.1371/journal.pone.0044267","title":"Suppression of IFN-Induced Transcription Underlies IFN Defects Generated by Activated Ras/MEK in Human Cancer Cells","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Canadian Institutes of Health Research; Terry Fox Foundation; Beatrice Hunter Cancer Research Institute; Cancer Research Institute","keywords":"Biology; HT1080; Interferon; Cancer cell; Oncolytic virus; Molecular biology; Cell culture; Cancer research; Cell biology; Virology; Cancer; Genetics","score_opus":0.05138250054113276,"score_gpt":0.26221178914018833,"score_spread":0.2108292885990556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035422548","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99674475,0.0005251856,0.0014248596,0.00003069693,0.0000083371515,0.00001343424,0.0007730116,0.000051581428,0.00042828402],"genre_scores_gemma":[0.9957386,0.00035537806,0.00167253,0.000024036553,0.0000033721103,0.000018148172,0.0012365709,0.00001181707,0.00093947165],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998721,0.000013526788,0.000012910294,0.000032756612,0.00003887741,0.00002989885],"domain_scores_gemma":[0.9999201,0.000014308849,0.000025862602,0.000013886028,0.000011049274,0.000014688545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007405696,0.00022347347,0.00021043635,0.00023694974,0.00012940013,0.00027678974,0.00009476215,0.00016082943,0.00088620756],"category_scores_gemma":[0.000107357555,0.00013660413,0.00028948497,0.00020554438,0.00016658081,0.00008610922,0.00012613734,0.00029002313,0.00036566844],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008016537,0.000006781823,0.0003742847,0.000012059632,0.0000026895411,0.00003213477,0.000013713201,0.00003349355,0.9990293,0.000023662831,0.0000106705265,0.00038099618],"study_design_scores_gemma":[0.000004614647,0.00011959106,0.009452929,0.0000030859374,0.000009094916,0.00026039087,0.000037789236,0.0006923209,0.9883278,0.000034460034,0.0010546922,0.0000032957764],"about_ca_topic_score_codex":0.0012246071,"about_ca_topic_score_gemma":0.0013774827,"teacher_disagreement_score":0.0012246071,"about_ca_system_score_codex":0.00029300246,"about_ca_system_score_gemma":0.00018562656,"threshold_uncertainty_score":0.0029646158},"labels":[],"label_agreement":null},{"id":"W2035897625","doi":"10.1016/j.bbrc.2009.08.028","title":"TRIM31 interacts with p52Shc and inhibits Src-induced anchorage-independent growth","year":2009,"lang":"en","type":"article","venue":"Biochemical and Biophysical Research Communications","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Japan Society for the Promotion of Science; Ministry of Education, Culture, Sports, Science and Technology; Uehara Memorial Foundation; Public Health Agency of Canada; Cell Science Research Foundation","keywords":"Proto-oncogene tyrosine-protein kinase Src; Gastrointestinal tract; Biology; Cell biology; Receptor; Signal transduction; Genetics; Biochemistry","score_opus":0.0602626682597318,"score_gpt":0.35393314566594397,"score_spread":0.29367047740621216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035897625","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990604,0.0033079586,0.0007651979,0.0002921927,0.000096449265,0.000045659013,0.00057404983,0.00018117623,0.0041332454],"genre_scores_gemma":[0.9935488,0.00082435616,0.00055520347,0.000088126755,0.00002095099,0.000042436906,0.0015915481,0.000018895089,0.0033097214],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99965286,0.000046000663,0.000019465911,0.000037263988,0.00008915132,0.0001552678],"domain_scores_gemma":[0.99981743,0.00003435083,0.00002841728,0.000038711798,0.000014648568,0.00006654377],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002792639,0.00027104578,0.00036635846,0.00035907756,0.00050607626,0.00044457166,0.0004757207,0.0005529032,0.0032066128],"category_scores_gemma":[0.00034857035,0.00026166192,0.00038866955,0.0003084645,0.00027664594,0.00018641034,0.0002997112,0.0007482326,0.0022413917],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00074241095,0.0001165564,0.0003201014,0.000063601234,0.000014916856,0.00015501841,0.000017414128,0.00013611342,0.9943573,0.00017703457,0.0010482526,0.0028511817],"study_design_scores_gemma":[0.00020238297,0.00047884748,0.011273138,0.000010873898,0.000018762357,0.000684377,0.00004609392,0.0021203193,0.97954834,0.00010260702,0.0054999576,0.000014287798],"about_ca_topic_score_codex":0.0016735116,"about_ca_topic_score_gemma":0.0023051396,"teacher_disagreement_score":0.0032066128,"about_ca_system_score_codex":0.00077562564,"about_ca_system_score_gemma":0.00046933515,"threshold_uncertainty_score":0.010727167},"labels":[],"label_agreement":null},{"id":"W2035914733","doi":"10.1074/jbc.m410392200","title":"Roles of an IκB Kinase-related Pathway in Human Cytomegalovirus-infected Vascular Smooth Muscle Cells","year":2004,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"TANK-binding kinase 1; Biology; Chemokine; Cell biology; IκB kinase; Innate immune system; Interferon regulatory factors; Kinase; CCL5; CXCL16; CXCL10; Protein kinase A; Immune system; Signal transduction; Immunology; T cell; Mitogen-activated protein kinase kinase; NF-κB; IL-2 receptor","score_opus":0.011582245566491251,"score_gpt":0.23438373033208612,"score_spread":0.22280148476559486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035914733","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98857427,0.007024321,0.002155175,0.00010542613,0.000052521904,0.000035016907,0.00048590085,0.000059840084,0.0015075242],"genre_scores_gemma":[0.9949393,0.0019570712,0.0011907306,0.000040104977,0.00001903311,0.000042237472,0.00062975584,0.0000044016942,0.0011773645],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998869,0.000020445625,0.000008901301,0.000027675122,0.00002446671,0.000031608724],"domain_scores_gemma":[0.99993074,0.000008314001,0.000016861539,0.000011642635,0.000008956402,0.000023549472],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016866482,0.0002903573,0.00011716197,0.00020738185,0.0001941315,0.00026900606,0.00009167609,0.00022268925,0.0008970914],"category_scores_gemma":[0.00011734769,0.00012130442,0.00025497968,0.00012056315,0.00016357822,0.00013814971,0.00016751436,0.0003651132,0.00033584333],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014408844,0.000016335747,0.00038011788,0.000042480384,0.000004149733,0.000079911384,0.000018725328,0.00003244528,0.9983316,0.00008483903,0.000014479544,0.00085077074],"study_design_scores_gemma":[0.000079667654,0.00068165426,0.070904985,0.000048206035,0.00005058781,0.002034607,0.00017105982,0.0018013003,0.917355,0.0005443543,0.0063111414,0.000017310453],"about_ca_topic_score_codex":0.00046968137,"about_ca_topic_score_gemma":0.00043266965,"teacher_disagreement_score":0.0008970914,"about_ca_system_score_codex":0.0003210733,"about_ca_system_score_gemma":0.00018072232,"threshold_uncertainty_score":0.0030010343},"labels":[],"label_agreement":null},{"id":"W2036092039","doi":"10.1038/nchembio.645","title":"Chemical inhibition of RNA viruses reveals REDD1 as a host defense factor","year":2011,"lang":"en","type":"article","venue":"Nature Chemical Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":73,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Center for Research Resources; National Institute of General Medical Sciences; National Cancer Institute; National Institutes of Health; York University","keywords":"RNA; Host factor; Host (biology); Biology; Virology; Genetics; Computational biology; Chemistry; Virus; Gene","score_opus":0.020682696370361974,"score_gpt":0.27309977526882695,"score_spread":0.252417078898465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036092039","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9759104,0.0031461802,0.008158352,0.00081599585,0.00020332307,0.000034341803,0.0009190698,0.00023968761,0.010572555],"genre_scores_gemma":[0.98932976,0.0007587855,0.0034985333,0.00024022293,0.00001906469,0.000017341123,0.00057553244,0.000044604272,0.0055161775],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998785,0.000016629869,0.0000052741034,0.000028125534,0.00003503836,0.00003647453],"domain_scores_gemma":[0.99991846,0.000021602096,0.000019771825,0.000014998209,0.0000058372098,0.00001929047],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017069788,0.00025797516,0.00015823028,0.00016277535,0.00018138437,0.0003279796,0.00042583118,0.00032154506,0.002876612],"category_scores_gemma":[0.00011225936,0.00015529244,0.00021603098,0.000081744605,0.00030480095,0.00018591368,0.00017602347,0.00068113796,0.0008514772],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012949626,0.000012215915,0.000078696175,0.000014823495,0.000002754179,0.000026095908,0.0000030093995,0.000073577095,0.9982639,0.00031749028,0.00009691405,0.0009811305],"study_design_scores_gemma":[0.00000652899,0.00004432851,0.0006381823,0.000001363522,0.0000025496402,0.00006979475,0.000005501978,0.0006945366,0.99684864,0.000053812208,0.00163265,0.0000021473543],"about_ca_topic_score_codex":0.0003583765,"about_ca_topic_score_gemma":0.0005210211,"teacher_disagreement_score":0.002876612,"about_ca_system_score_codex":0.00047738943,"about_ca_system_score_gemma":0.00016906977,"threshold_uncertainty_score":0.0096232295},"labels":[],"label_agreement":null},{"id":"W2037151930","doi":"10.1074/jbc.c800030200","title":"ISG15 Inhibits Nedd4 Ubiquitin E3 Activity and Enhances the Innate Antiviral Response*","year":2008,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":202,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Cancer Institute","keywords":"ISG15; NEDD4; Ubiquitin; Innate immune system; Cell biology; Chemistry; Ubiquitin ligase; Biology; Biochemistry; Receptor; Gene","score_opus":0.024091630748272065,"score_gpt":0.25897803115687673,"score_spread":0.23488640040860467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037151930","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923071,0.002896785,0.0013868613,0.0001344817,0.000091217385,0.000049072652,0.00025573815,0.00009915691,0.0027796703],"genre_scores_gemma":[0.994859,0.00074777217,0.0016049433,0.0001090021,0.000013270819,0.000042111194,0.0005003893,0.000017622238,0.0021059],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982554,0.00003627736,0.000022639008,0.000020719635,0.000044285054,0.00005056586],"domain_scores_gemma":[0.99992204,0.000012468432,0.000015849106,0.000012588413,0.000009344981,0.000027735226],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018172088,0.00038280827,0.0004302742,0.00019527304,0.000101581776,0.00026756903,0.00027099592,0.00030578676,0.0012510242],"category_scores_gemma":[0.0001064511,0.000107253385,0.00029161017,0.00016402022,0.00023918826,0.00016492039,0.00013152175,0.00047821042,0.00037428128],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000528628,0.00014872338,0.00022224586,0.00005218063,0.000016607779,0.000040099807,0.000008212559,0.00012455572,0.9963168,0.00016266228,0.00013698505,0.0022422129],"study_design_scores_gemma":[0.0000631202,0.00088612054,0.002045376,0.0000055850423,0.000017019134,0.00012387655,0.0000088935885,0.00085685716,0.99321246,0.000033995275,0.0027430048,0.0000036975264],"about_ca_topic_score_codex":0.0005613846,"about_ca_topic_score_gemma":0.0007021999,"teacher_disagreement_score":0.0012510242,"about_ca_system_score_codex":0.0002856004,"about_ca_system_score_gemma":0.00023308607,"threshold_uncertainty_score":0.0041850805},"labels":[],"label_agreement":null},{"id":"W2037563133","doi":"10.1038/embor.2011.157","title":"Mitochondria in innate immunity","year":2011,"lang":"en","type":"review","venue":"EMBO Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":255,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"","keywords":"Innate immune system; Mitochondrion; Cell biology; Biology; Signal transducing adaptor protein; Immune system; Organelle; Acquired immune system; Programmed cell death; Inflammation; Signal transduction; Immunology; Apoptosis; Biochemistry","score_opus":0.04585605575773321,"score_gpt":0.31472082203687346,"score_spread":0.26886476627914024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037563133","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009855833,0.99375606,0.00036012105,0.0011959568,0.002970343,0.0000063560683,0.000018864206,0.000015971551,0.0015777418],"genre_scores_gemma":[0.0014080866,0.98944527,0.00044396365,0.0007917014,0.004702179,0.000011636735,0.000052711453,0.0000040687273,0.0031402905],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99981195,0.000030919276,0.000027482947,0.000034316196,0.000072192524,0.000023139939],"domain_scores_gemma":[0.9996412,0.00010852532,0.00005325894,0.000018553625,0.00010251098,0.000075966906],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007486823,0.0013226124,0.0016022506,0.0014962978,0.0003877416,0.0015265341,0.0012284314,0.00184451,0.0032568735],"category_scores_gemma":[0.0007135774,0.0004181343,0.00029058606,0.0014328661,0.001081743,0.0024529826,0.0014134638,0.0030799564,0.0033069204],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018266766,0.00006147048,0.0001032664,0.006420123,0.00005224595,0.00036083616,0.000060429174,0.00030145267,0.0037887972,0.005788316,0.13974623,0.8431342],"study_design_scores_gemma":[0.000026864755,0.000039108123,0.00022297881,0.00089213945,0.000041437164,0.0007073261,0.000035784935,0.00007535607,0.00042475303,0.003410029,0.99411243,0.000011627289],"about_ca_topic_score_codex":0.00049425894,"about_ca_topic_score_gemma":0.0012380199,"teacher_disagreement_score":0.0032568735,"about_ca_system_score_codex":0.00081705255,"about_ca_system_score_gemma":0.0010093917,"threshold_uncertainty_score":0.010895371},"labels":[],"label_agreement":null},{"id":"W2037622015","doi":"10.1128/jvi.06892-11","title":"Temporal- and Strain-Specific Host MicroRNA Molecular Signatures Associated with Swine-Origin H1N1 and Avian-Origin H7N7 Influenza A Virus Infection","year":2012,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency; University of British Columbia","funders":"Canadian Institutes of Health Research; Western Canada Research Grid; Compute Canada; Canadian Food Inspection Agency","keywords":"Biology; microRNA; Influenza A virus; Viral life cycle; Viral replication; Gene expression profiling; Virus; DNA microarray; Gene expression; Gene; Regulation of gene expression; Phenotype; Transcriptome; Cell biology; Virology; Genetics","score_opus":0.015846638540920777,"score_gpt":0.26280028756937424,"score_spread":0.24695364902845346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037622015","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99830675,0.0005611267,0.00049857097,0.00001404857,0.000005156419,0.0000110754345,0.00028734218,0.000008676394,0.00030724093],"genre_scores_gemma":[0.99771714,0.00035031495,0.00097088213,0.00003389954,0.00000634702,0.000042615193,0.00055611687,0.0000047493263,0.00031791645],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989045,0.000013423048,0.00001002481,0.000038056765,0.00002275798,0.000025237488],"domain_scores_gemma":[0.99987733,0.000023147435,0.000049921226,0.0000070962074,0.000021375094,0.00002116428],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013262698,0.00013213317,0.00022958375,0.00029250732,0.00009322271,0.00020925468,0.00008266718,0.0002074287,0.00038447473],"category_scores_gemma":[0.00017296198,0.00013051368,0.00021712833,0.0001600596,0.00013664659,0.00014853492,0.00014445891,0.00018258045,0.00011966132],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003849141,0.000024103945,0.016803943,0.00003457858,0.000019016254,0.000068826506,0.000058024707,0.00010117835,0.98015517,0.000051954907,0.000040301584,0.0022580281],"study_design_scores_gemma":[0.000013886038,0.0006913372,0.7401422,0.000009472055,0.00006665438,0.00071704714,0.00029510615,0.0038180656,0.25307092,0.00016786851,0.0009809663,0.000026432692],"about_ca_topic_score_codex":0.00053873763,"about_ca_topic_score_gemma":0.00068425806,"teacher_disagreement_score":0.00053873763,"about_ca_system_score_codex":0.00014141109,"about_ca_system_score_gemma":0.00012050799,"threshold_uncertainty_score":0.0012862086},"labels":[],"label_agreement":null},{"id":"W2037976606","doi":"10.1139/o04-041","title":"Retinoic acid-inducible gene-I is induced by interferon-γ and regulates the expression of interferon-γ stimulated gene 15 in MCF-7 cells","year":2004,"lang":"en","type":"article","venue":"Biochemistry and Cell Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Retinoic acid; Interferon; Transfection; Molecular biology; Gene; Biology; Gene expression; Complementary DNA; Regulation of gene expression; Downregulation and upregulation; MCF-7; Messenger RNA; Cancer cell; Biochemistry; Cancer; Genetics","score_opus":0.009222579850562612,"score_gpt":0.22629687878068294,"score_spread":0.21707429893012034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037976606","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96746194,0.010746613,0.009252412,0.0004911248,0.00015934357,0.00006991824,0.0025717511,0.00034294854,0.008904014],"genre_scores_gemma":[0.97890043,0.0036179163,0.0066202176,0.00019546036,0.000026129894,0.000048064267,0.0029849662,0.000048072194,0.0075587337],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978775,0.00003391286,0.000019855172,0.000031734162,0.00007092362,0.000055786837],"domain_scores_gemma":[0.9998779,0.000019290976,0.000035026784,0.00002028324,0.000022409635,0.000025012467],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018894333,0.00039213913,0.00032263238,0.00036477725,0.00019788566,0.0004856509,0.00016845234,0.00025439687,0.0013636559],"category_scores_gemma":[0.000108226515,0.00025290644,0.00042148834,0.0002317211,0.00025475028,0.00019162927,0.00021785412,0.0005789064,0.0014009905],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036806603,0.000006232286,0.00013570832,0.000018299845,0.0000029848413,0.000044530814,0.00001909192,0.000023525696,0.99917066,0.000086757376,0.000039786613,0.00041561257],"study_design_scores_gemma":[0.000010613085,0.00011950931,0.004144096,0.000015316196,0.000014654536,0.00032914602,0.000079282894,0.0005566138,0.9895509,0.000073206334,0.0050998954,0.0000068221325],"about_ca_topic_score_codex":0.001392888,"about_ca_topic_score_gemma":0.0013325842,"teacher_disagreement_score":0.001392888,"about_ca_system_score_codex":0.0005897136,"about_ca_system_score_gemma":0.0002724059,"threshold_uncertainty_score":0.004561901},"labels":[],"label_agreement":null},{"id":"W2039721697","doi":"10.1096/fj.08-121434","title":"Astrocytes recognize intracellular polyinosinic‐polycytidylic acid <i>via</i> MDA‐5","year":2008,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Intracellular; Extracellular; Cell biology; RNA; Biology; Innate immune system; Molecular biology; Gene expression; Chemistry; Receptor; Biochemistry; Gene","score_opus":0.019120755503581773,"score_gpt":0.22477680502814212,"score_spread":0.20565604952456035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039721697","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9848905,0.0023867318,0.0068531167,0.00014920667,0.00007998363,0.00005093984,0.0003204194,0.0001466973,0.0051224073],"genre_scores_gemma":[0.99285614,0.00083163404,0.0031679836,0.00008392015,0.00001411482,0.00004150816,0.00034573695,0.000012643095,0.002646345],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998654,0.000020091315,0.000010885231,0.000026713351,0.000038958024,0.00003789458],"domain_scores_gemma":[0.99994206,0.00000745895,0.000017431921,0.000008092128,0.00001107512,0.000013900218],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000083456245,0.00041765822,0.00015492254,0.00008066069,0.00012496673,0.00032789115,0.0001254096,0.0002566614,0.0009042331],"category_scores_gemma":[0.00006620582,0.00011833292,0.00024196832,0.00008335754,0.00015851253,0.00017235153,0.00015835663,0.00043967066,0.0005627187],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028778544,0.0000045240367,0.00008849862,0.000019014566,0.0000019434826,0.000031327178,0.000007998307,0.00001573212,0.99940395,0.000053049844,0.000015616377,0.00032953112],"study_design_scores_gemma":[0.0000064800643,0.00013810967,0.0017371934,0.000005510831,0.000015229599,0.00012389944,0.00002405584,0.00030201877,0.9958774,0.000033359072,0.0017348625,0.0000018898787],"about_ca_topic_score_codex":0.0006656024,"about_ca_topic_score_gemma":0.0009509239,"teacher_disagreement_score":0.0009042331,"about_ca_system_score_codex":0.00021828972,"about_ca_system_score_gemma":0.00018640359,"threshold_uncertainty_score":0.0030249357},"labels":[],"label_agreement":null},{"id":"W2039959381","doi":"10.5339/qfarf.2011.bmps10","title":"Loss Of Calreticulin Function Decreases NFKB Activity By Stabilizing IKB Protein","year":2011,"lang":"en","type":"article","venue":"Qatar Foundation Annual Research Forum Proceedings","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Calreticulin; Endoplasmic reticulum; Unfolded protein response; Transfection; Cell biology; Western blot; Reporter gene; Apoptosis; Chemistry; Molecular biology; Biology; Gene expression; Gene; Biochemistry","score_opus":0.0532057014474673,"score_gpt":0.3230687110670071,"score_spread":0.2698630096195398,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039959381","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943738,0.0019074583,0.00233059,0.00020925829,0.00006325073,0.000019189247,0.00043123137,0.00014200342,0.0005231036],"genre_scores_gemma":[0.99353397,0.00095722184,0.0025794278,0.00007769504,0.000013967546,0.000037719637,0.00085934857,0.00004386016,0.001896792],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984014,0.000021070131,0.000025362015,0.000031375814,0.000037730093,0.000044252687],"domain_scores_gemma":[0.9997086,0.000037249752,0.000116982796,0.00003386696,0.000029217626,0.000073986295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014766025,0.00048866903,0.00043431183,0.00021342553,0.00015681465,0.00033917325,0.00030828692,0.00034240572,0.0018018571],"category_scores_gemma":[0.00018978001,0.000150749,0.00026742544,0.00017010061,0.00034362136,0.00022777212,0.0001952211,0.00088682846,0.00061181036],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001854125,0.000040524876,0.0001303172,0.000035124373,0.000006126895,0.000021207317,0.0000045002607,0.00003327336,0.9990711,0.000020025123,0.00003633101,0.00041604837],"study_design_scores_gemma":[0.000036623846,0.00029548744,0.0035200524,0.000009041113,0.00001952385,0.00018877878,0.000026906195,0.00052909344,0.9938519,0.000026734237,0.0014920562,0.0000037307113],"about_ca_topic_score_codex":0.0005896793,"about_ca_topic_score_gemma":0.0005371025,"teacher_disagreement_score":0.0018018571,"about_ca_system_score_codex":0.0004012574,"about_ca_system_score_gemma":0.00025689742,"threshold_uncertainty_score":0.006027758},"labels":[],"label_agreement":null},{"id":"W2040326307","doi":"10.1016/s1050-4648(03)00114-1","title":"Sequencing and expression of the second allele of the interleukin-1β1 gene in rainbow trout (Oncorhynchus mykiss): identification of a novel SINE in the third intron","year":2003,"lang":"en","type":"article","venue":"Fish & Shellfish Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Biology; Trout; Genetics; Intron; Rainbow trout; Gene; Sequence analysis; Molecular biology; Complementary DNA; Fishery","score_opus":0.01228748223246863,"score_gpt":0.22479983391748304,"score_spread":0.21251235168501442,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040326307","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977964,0.000053880172,0.0014123434,0.000029477085,0.0000064122432,0.0000123496475,0.00027490643,0.000013400801,0.00040088966],"genre_scores_gemma":[0.99318933,0.00008450101,0.0022751233,0.00007365314,0.0000071518552,0.000025380761,0.0018583807,0.00003957851,0.0024470624],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999516,0.0000032868697,0.000003116249,0.000014694135,0.000014265643,0.000013068911],"domain_scores_gemma":[0.9997911,0.00004245591,0.000057851208,0.000022316795,0.000033138058,0.000053215597],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000889586,0.00019562375,0.00018440984,0.00024069587,0.00016870085,0.00022897187,0.0001517098,0.00022554726,0.0005245441],"category_scores_gemma":[0.00020235234,0.0001641914,0.00037282353,0.00013611575,0.00022871244,0.000075834796,0.00020435233,0.0004716772,0.00035181723],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007061313,0.000007871197,0.0015789607,0.00000841172,0.00000266558,0.00007950143,0.00006756973,0.000030747113,0.99735034,0.000060753777,0.000010993574,0.0007316353],"study_design_scores_gemma":[0.000114236216,0.0006996275,0.39756063,0.00002868612,0.0001212659,0.0022757673,0.000560118,0.0023147182,0.59194714,0.00025961726,0.004087899,0.000030335472],"about_ca_topic_score_codex":0.002626535,"about_ca_topic_score_gemma":0.0048311544,"teacher_disagreement_score":0.002626535,"about_ca_system_score_codex":0.00025774285,"about_ca_system_score_gemma":0.00035804405,"threshold_uncertainty_score":0.0052224994},"labels":[],"label_agreement":null},{"id":"W2040481257","doi":"10.1038/gene.2009.22","title":"Adaptive evolution of interferon-γ in Glire lineage and evidence for a recent selective sweep in Mus. m. domesticus","year":2009,"lang":"en","type":"article","venue":"Genes and Immunity","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centre National de la Recherche Scientifique; Institut national de la recherche scientifique","keywords":"Biology; Subspecies; Haplotype; Genetics; Gene; Lineage (genetic); Selective sweep; Coding region; Immune system; Major histocompatibility complex; Phenotype; Acquired immune system; Genotype; Zoology","score_opus":0.03594512124868688,"score_gpt":0.30034247360945804,"score_spread":0.26439735236077117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040481257","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984125,0.00023116598,0.00043193216,0.00006368751,0.0000032767007,0.0000021674737,0.00007197229,0.000012418517,0.00077074586],"genre_scores_gemma":[0.9981571,0.000119550234,0.0006050875,0.000105530395,0.000006516545,0.0000053146027,0.00016072323,0.00001342042,0.00082669186],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998696,0.000024422272,0.000009925686,0.000050984825,0.000019259362,0.000025778389],"domain_scores_gemma":[0.99981374,0.00003440197,0.000058730224,0.00003409541,0.000023676488,0.000035264173],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028269956,0.0001787201,0.00018519784,0.00051526295,0.00022617436,0.00021182798,0.00027541982,0.00036810263,0.0008186595],"category_scores_gemma":[0.0001810286,0.00015549705,0.00017481265,0.00022371543,0.00032495466,0.00017860462,0.00038651822,0.00043983266,0.00021379742],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012809447,0.000007066938,0.009647593,0.000018882838,0.0000126536515,0.00010183997,0.00011774378,0.00008140371,0.9857858,0.00031771755,0.000025335667,0.00375589],"study_design_scores_gemma":[0.000046042795,0.000526649,0.8676979,0.000037686666,0.00010170297,0.002597464,0.0005781367,0.0017571448,0.117378406,0.00082848937,0.008409963,0.000040430772],"about_ca_topic_score_codex":0.0004736161,"about_ca_topic_score_gemma":0.0015290603,"teacher_disagreement_score":0.0008186595,"about_ca_system_score_codex":0.00034461918,"about_ca_system_score_gemma":0.000096428936,"threshold_uncertainty_score":0.0027387142},"labels":[],"label_agreement":null},{"id":"W2040866706","doi":"10.1155/2012/153415","title":"TRIM22: A Diverse and Dynamic Antiviral Protein","year":2012,"lang":"en","type":"article","venue":"Molecular Biology International","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Ontario HIV Treatment Network","keywords":"Virology; Virus; Gene; Human immunodeficiency virus (HIV); Biology; Computational biology; Hepatitis B virus; Viral evolution; Medicine; Genetics; Genome","score_opus":0.006835117421009506,"score_gpt":0.2752829719324958,"score_spread":0.2684478545114863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040866706","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.81033474,0.1097107,0.03528541,0.0021486508,0.000629787,0.00015951345,0.0043818997,0.0025156057,0.0348337],"genre_scores_gemma":[0.90976566,0.026036369,0.019572476,0.0010670399,0.00035963158,0.00010123405,0.0063638887,0.00021070456,0.036522992],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988365,0.000015699465,0.000008082532,0.00003357748,0.000035378813,0.000023527398],"domain_scores_gemma":[0.9999361,0.0000031626878,0.000014109058,0.000005821291,0.000013362926,0.000027538103],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001738721,0.00043030208,0.00029299298,0.0005522546,0.00045517812,0.00077408017,0.00034172548,0.0005057537,0.0021784855],"category_scores_gemma":[0.00011669591,0.00014071957,0.0002814799,0.0004146745,0.00021935189,0.00036132004,0.00051468745,0.00046725277,0.0017551975],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018193365,0.00002574402,0.001560496,0.00019482293,0.000023727682,0.00074411504,0.00006884493,0.00025902435,0.9461405,0.0011913723,0.00401194,0.045597475],"study_design_scores_gemma":[0.000048262646,0.00048834184,0.0307255,0.00012388462,0.00011140152,0.0148261115,0.00024640077,0.0034335277,0.6104539,0.0023073235,0.33713558,0.00009971692],"about_ca_topic_score_codex":0.00039603363,"about_ca_topic_score_gemma":0.0003522104,"teacher_disagreement_score":0.0021784855,"about_ca_system_score_codex":0.0004801027,"about_ca_system_score_gemma":0.00027362723,"threshold_uncertainty_score":0.0072878003},"labels":[],"label_agreement":null},{"id":"W2041021719","doi":"10.1089/jir.2012.0052","title":"HIV Downregulates Interferon-Stimulated Genes in Primary Macrophages","year":2012,"lang":"en","type":"article","venue":"Journal of Interferon & Cytokine Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"National Institute of Allergy and Infectious Diseases; Center for AIDS Research, University of Washington; University of California, San Diego; National Institutes of Health; Office of Research and Development; U.S. Department of Veterans Affairs","keywords":"ISG15; Downregulation and upregulation; Innate immune system; Interferon; Biology; Transcriptome; Interferon-stimulated gene; Immune system; Gene; Virus; Virology; Interferon type I; Reverse transcriptase; Immunology; Gene expression; Polymerase chain reaction; Genetics; Ubiquitin","score_opus":0.04666684091047454,"score_gpt":0.34463240503053083,"score_spread":0.2979655641200563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041021719","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904861,0.0026330375,0.0029722045,0.00014023695,0.00012376386,0.00008483734,0.0011717795,0.0000882869,0.0022997246],"genre_scores_gemma":[0.9832638,0.0020798396,0.005514365,0.0002604029,0.00006477863,0.00023332397,0.0022523166,0.000041944455,0.0062890984],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978787,0.000030072995,0.000023387527,0.000039707636,0.00004824828,0.00007076201],"domain_scores_gemma":[0.9998826,0.000030489455,0.000019430152,0.000017194421,0.000027890355,0.000022382808],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020879826,0.000344246,0.00041338959,0.00021999364,0.000161408,0.00032054173,0.00012288579,0.00022434107,0.001401272],"category_scores_gemma":[0.00011015447,0.00014848154,0.0003765429,0.00017103988,0.0001898772,0.00012490561,0.0001895583,0.00056357356,0.0006699893],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000087663604,0.000020526624,0.000084789615,0.000032526576,0.0000023365126,0.000018545,0.000011896269,0.000015943231,0.9992042,0.000015036874,0.000026147332,0.00048033198],"study_design_scores_gemma":[0.00002265297,0.00047504698,0.0048787156,0.000011274298,0.000017464688,0.00009544035,0.000044162894,0.00037779697,0.9921938,0.0000436064,0.0018361519,0.0000037756138],"about_ca_topic_score_codex":0.0003149486,"about_ca_topic_score_gemma":0.00052307744,"teacher_disagreement_score":0.001401272,"about_ca_system_score_codex":0.00018031971,"about_ca_system_score_gemma":0.0002092838,"threshold_uncertainty_score":0.0046877265},"labels":[],"label_agreement":null},{"id":"W2041398170","doi":"10.1038/434709a","title":"The genetics of vulnerability","year":2005,"lang":"en","type":"letter","venue":"Nature","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Children's Hospital","funders":"","keywords":"Biology; Tuberculosis; Mycobacterium tuberculosis; Gene; Listeria monocytogenes; Genetics; Innate immune system; Immunity; Pathogen; Disease; Immunology; Microbiology; Virology; Bacteria; Immune system; Medicine","score_opus":0.008382876804729426,"score_gpt":0.26475098480210363,"score_spread":0.2563681079973742,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041398170","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.006447328,0.009545573,0.0005877907,0.9525518,0.014373372,0.0000084922995,0.00005048803,0.000037176487,0.016398076],"genre_scores_gemma":[0.22964771,0.012150289,0.0009113992,0.63812333,0.085163996,0.00007362924,0.00006593056,0.000051566367,0.033812113],"study_design_codex":"not_applicable","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9994104,0.00019659905,0.000030103069,0.00012051348,0.00014960932,0.00009277422],"domain_scores_gemma":[0.99784756,0.0013917156,0.00010615285,0.00016118475,0.00015756657,0.00033588952],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010660879,0.00040318855,0.0006725387,0.00040054368,0.0015843072,0.0015044529,0.0007980996,0.011502281,0.0044097467],"category_scores_gemma":[0.0062173135,0.0002233269,0.00030009632,0.00020539001,0.003784485,0.002463445,0.0012099866,0.012149962,0.0010577504],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017149468,0.00006412397,0.0037486975,0.000095512,0.00006123673,0.009490565,0.00097077864,0.00016275875,0.0017396043,0.15379179,0.76565784,0.06404559],"study_design_scores_gemma":[0.00020990118,0.000070446215,0.004260659,0.00031028336,0.00006681433,0.018867318,0.0012756812,0.00098429,0.0011100182,0.3173486,0.65543044,0.000065614266],"about_ca_topic_score_codex":0.00091975124,"about_ca_topic_score_gemma":0.0014476087,"teacher_disagreement_score":0.011502281,"about_ca_system_score_codex":0.001209903,"about_ca_system_score_gemma":0.0007346355,"threshold_uncertainty_score":0.01475209},"labels":[],"label_agreement":null},{"id":"W2041769542","doi":"10.1002/biof.6","title":"Interferons and viral infections","year":2009,"lang":"en","type":"review","venue":"BioFactors","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":397,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Tellabs (Canada)","funders":"National Cancer Institute","keywords":"Interferon; Biology; Innate immune system; Immune system; Virology; Receptor; Pattern recognition receptor; Virus; Immunology; Genetics","score_opus":0.03442320956596849,"score_gpt":0.3173130819296923,"score_spread":0.2828898723637238,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041769542","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00014763387,0.9969404,0.000120685916,0.00021685938,0.00048630396,0.0000036636695,0.0000065662216,0.000006229652,0.0020716502],"genre_scores_gemma":[0.0015760998,0.9953145,0.00014434815,0.00028182357,0.0005951696,0.000008721694,0.000025007537,0.0000014418429,0.0020528869],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997539,0.000049360548,0.00002947228,0.000039689254,0.00009725273,0.000030403422],"domain_scores_gemma":[0.9998417,0.000059625538,0.000026805812,0.000008121397,0.000039424132,0.000024316547],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040105128,0.0009120178,0.0011023076,0.0011614243,0.00043496207,0.001011674,0.0006954803,0.0014193193,0.0027029058],"category_scores_gemma":[0.00046690504,0.00022345386,0.0002765373,0.0014213528,0.0007842731,0.001167345,0.00068706693,0.001572847,0.003064624],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006961547,0.000050503226,0.0002566566,0.0054055867,0.000032706248,0.00037319466,0.00015606878,0.00032335724,0.005112265,0.010126099,0.047610156,0.93048376],"study_design_scores_gemma":[0.000008184019,0.000031909025,0.00044270355,0.0010214656,0.000012374447,0.0011042255,0.00004732698,0.000029685916,0.0005692423,0.0034768702,0.9932474,0.000008641121],"about_ca_topic_score_codex":0.0006383945,"about_ca_topic_score_gemma":0.0007480376,"teacher_disagreement_score":0.0027029058,"about_ca_system_score_codex":0.00077866385,"about_ca_system_score_gemma":0.0007987398,"threshold_uncertainty_score":0.009042084},"labels":[],"label_agreement":null},{"id":"W2042045861","doi":"10.1016/j.molimm.2011.03.017","title":"Regulation of influenza A virus induced CXCL-10 gene expression requires PI3K/Akt pathway and IRF3 transcription factor","year":2011,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research; Saskatchewan Health Research Foundation","keywords":"IRF3; Transcription factor; PI3K/AKT/mTOR pathway; Protein kinase B; Virology; IRF7; Gene; Biology; Cancer research; Cell biology; Signal transduction; Genetics","score_opus":0.03479787996027328,"score_gpt":0.24359517103147832,"score_spread":0.20879729107120504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042045861","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98887444,0.0022504204,0.002830987,0.00039370597,0.00019130726,0.000050079114,0.0010162137,0.0001401473,0.0042525777],"genre_scores_gemma":[0.9916032,0.00068925484,0.002279039,0.00010699711,0.00002619625,0.000061621606,0.0010082592,0.000019103796,0.004206328],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999783,0.000032376207,0.000013767592,0.000032992546,0.000029663759,0.00010814364],"domain_scores_gemma":[0.9998907,0.000016335687,0.000023024186,0.0000148051195,0.00002099321,0.000034124387],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017666309,0.0004188438,0.00016973463,0.00024296885,0.00030638152,0.00035547148,0.00015443095,0.00022030703,0.0026019958],"category_scores_gemma":[0.00010812305,0.00020477774,0.00048997806,0.00010464791,0.0003081544,0.00034629257,0.0002987951,0.000995357,0.0008067149],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00069898024,0.00006768713,0.00065951055,0.000041516436,0.0000072460066,0.00009224924,0.00001750754,0.000080554506,0.995545,0.00032074456,0.00021628321,0.0022526956],"study_design_scores_gemma":[0.00013534453,0.00044057742,0.072911404,0.00003026221,0.000028060931,0.00049882865,0.00019314646,0.003857869,0.9172792,0.00050756405,0.0041017095,0.000015986656],"about_ca_topic_score_codex":0.0011120833,"about_ca_topic_score_gemma":0.0017322123,"teacher_disagreement_score":0.0026019958,"about_ca_system_score_codex":0.0006079719,"about_ca_system_score_gemma":0.00042808458,"threshold_uncertainty_score":0.0087044835},"labels":[],"label_agreement":null},{"id":"W2042744739","doi":"10.1016/j.cyto.2010.07.037","title":"CS2-6 Linear ubiquitination of NEMO negatively regulates type I interferon signaling pathway","year":2010,"lang":"en","type":"article","venue":"Cytokine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Ubiquitin; Interferon; Cell biology; Chemistry; Signal transduction; Biology; Immunology; Biochemistry","score_opus":0.014005173174421175,"score_gpt":0.25314918032055045,"score_spread":0.23914400714612927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042744739","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993335,0.0013516222,0.0021161807,0.0002888136,0.00010631995,0.000009772982,0.0002823973,0.000058208763,0.0024516354],"genre_scores_gemma":[0.9945018,0.00028102257,0.00057618774,0.000059026035,0.000014400276,0.000006192194,0.0005509261,0.000014537821,0.003995988],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998524,0.000022539334,0.000011878765,0.000031269647,0.00003408171,0.000047794878],"domain_scores_gemma":[0.9998542,0.000010839374,0.00003386163,0.000024076084,0.000030305178,0.000046713805],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001529183,0.0004149883,0.00019440992,0.00013776546,0.0005058742,0.00046168503,0.0002580625,0.00032309716,0.0032114005],"category_scores_gemma":[0.00014409544,0.00013133627,0.0003322981,0.00012585009,0.0002627283,0.00038606414,0.00034922577,0.0005655257,0.0010502097],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041269232,0.000026916898,0.00054255757,0.00003285966,0.000008590376,0.00008767399,0.000009098513,0.00006321302,0.9976152,0.0002718941,0.00014462788,0.0007847377],"study_design_scores_gemma":[0.000013734464,0.000051676714,0.0055962377,0.0000036275967,0.0000077227705,0.00027813407,0.000042912736,0.0010120034,0.9902774,0.00009424946,0.0026169622,0.0000054835127],"about_ca_topic_score_codex":0.0007525904,"about_ca_topic_score_gemma":0.0010281722,"teacher_disagreement_score":0.0032114005,"about_ca_system_score_codex":0.0005869768,"about_ca_system_score_gemma":0.00030720956,"threshold_uncertainty_score":0.01074326},"labels":[],"label_agreement":null},{"id":"W2042865142","doi":"10.1016/j.ygeno.2008.11.011","title":"Divergence of the vertebrate sp1A/ryanodine receptor domain and SOCS box-containing (Spsb) gene family and its expression and regulation within the mouse brain","year":2009,"lang":"en","type":"article","venue":"Genomics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Gene; Functional divergence; Gene duplication; Gene family; Genetics; Function (biology); Vertebrate; Gene expression; Regulation of gene expression; Regulatory sequence; Phylogenetic tree","score_opus":0.010846105734215288,"score_gpt":0.2147170133303069,"score_spread":0.2038709075960916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042865142","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99623126,0.0009522681,0.0014696204,0.00007384885,0.0000071212526,0.0000033820063,0.00022257864,0.000024774467,0.0010151904],"genre_scores_gemma":[0.99135524,0.0006653596,0.0019769701,0.000109878136,0.000012839105,0.00002282342,0.00087762834,0.00006278695,0.0049164356],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998242,0.000012028724,0.000009905689,0.00006634956,0.000043737266,0.000043826534],"domain_scores_gemma":[0.9998223,0.000025735462,0.00005715087,0.000017725395,0.00002538547,0.00005167506],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013535251,0.00022044551,0.00026768743,0.00075687806,0.00022055884,0.00037031336,0.00030089935,0.00035255455,0.000952111],"category_scores_gemma":[0.00018166442,0.00029788318,0.00025672896,0.00019038627,0.0003889018,0.00035789545,0.00034514806,0.00084243034,0.00032984346],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011830325,0.0000064759056,0.0007908964,0.000008231655,0.0000051068682,0.00006566038,0.000031281663,0.000029275827,0.9971003,0.0005014394,0.00002095358,0.0013221328],"study_design_scores_gemma":[0.00006552701,0.00040446766,0.34910408,0.000048842834,0.00009376246,0.00442316,0.00036081916,0.001842393,0.63322276,0.0021063474,0.008292923,0.000035013058],"about_ca_topic_score_codex":0.000791185,"about_ca_topic_score_gemma":0.0011715937,"teacher_disagreement_score":0.000952111,"about_ca_system_score_codex":0.0002983692,"about_ca_system_score_gemma":0.00025447647,"threshold_uncertainty_score":0.003185153},"labels":[],"label_agreement":null},{"id":"W2044669188","doi":"10.1016/j.immuni.2010.12.006","title":"CuRTAiling Interferon Regulatory Factor Signaling with the E3 Ligase RAUL","year":2010,"lang":"en","type":"letter","venue":"Immunity","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"IRF7; IRF3; Interferon regulatory factors; Biology; Ubiquitin ligase; Interferon; Transcription factor; Innate immune system; Acquired immune system; Pattern recognition receptor; Cell biology; Receptor; Genetics; Ubiquitin; Gene; Immune system","score_opus":0.015422771067349874,"score_gpt":0.23401037845708944,"score_spread":0.21858760738973956,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044669188","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04612909,0.053862765,0.008229118,0.8035756,0.050629117,0.0001437282,0.0004939011,0.000979559,0.035957173],"genre_scores_gemma":[0.41755864,0.027395735,0.010034093,0.42436954,0.039829478,0.00034637065,0.0004466802,0.00025974147,0.07975981],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99944955,0.00015382192,0.00004463433,0.00007491207,0.00016559927,0.00011137209],"domain_scores_gemma":[0.9995016,0.00025316037,0.000047990638,0.00005580939,0.000045363453,0.00009600201],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010492072,0.0008496459,0.0010266805,0.00024334327,0.0007438723,0.0014709389,0.0007478747,0.0056090336,0.0038635305],"category_scores_gemma":[0.002481356,0.00030323985,0.00062384654,0.00015359637,0.0011367211,0.001093281,0.00085001026,0.007948993,0.0032034698],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035693944,0.00037819476,0.0024403213,0.00070134486,0.00024862142,0.0090505965,0.00022116453,0.0013014674,0.06224649,0.028533794,0.7560734,0.13523524],"study_design_scores_gemma":[0.00094375707,0.00058871275,0.0017859797,0.000102422026,0.00009531899,0.009348842,0.00019292664,0.0041616517,0.082296066,0.024229717,0.8761533,0.000101262856],"about_ca_topic_score_codex":0.00032768425,"about_ca_topic_score_gemma":0.000671036,"teacher_disagreement_score":0.0056090336,"about_ca_system_score_codex":0.0012251489,"about_ca_system_score_gemma":0.00046922648,"threshold_uncertainty_score":0.01292485},"labels":[],"label_agreement":null},{"id":"W2044818544","doi":"10.1038/nature11783","title":"Structural basis for viral 5′-PPP-RNA recognition by human IFIT proteins","year":2013,"lang":"en","type":"article","venue":"Nature","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":225,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Research Council Canada; Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Western Economic Diversification Canada; Österreichischen Akademie der Wissenschaften; University of Saskatchewan; Canadian Light Source","keywords":"Tetratricopeptide; RNA; Biology; Innate immune system; Interferon; Effector; Cell biology; RNA Helicase A; Genetics; Gene; Helicase; Immune system","score_opus":0.010859860490695063,"score_gpt":0.25676072768639,"score_spread":0.24590086719569496,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044818544","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97531146,0.0015933862,0.016799478,0.0005676521,0.00017770489,0.000057538044,0.00030186184,0.00023546496,0.004955442],"genre_scores_gemma":[0.99524707,0.00018136385,0.0031916327,0.00014358752,0.000025415935,0.000017161974,0.00031900578,0.000013451358,0.0008613813],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998832,0.000024079305,0.000009316926,0.000026246697,0.000026829432,0.000030414081],"domain_scores_gemma":[0.9998641,0.000035782996,0.000028568606,0.00002263172,0.000015819103,0.00003302633],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001967313,0.00034311038,0.00032583662,0.0001244161,0.00050565775,0.00037947678,0.000382279,0.0006755682,0.0022501445],"category_scores_gemma":[0.00032745377,0.00018100979,0.0005496622,0.00009985572,0.00028826436,0.00025313007,0.00024024396,0.0006991153,0.0009955472],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005151238,0.00006171433,0.0010727315,0.0000863379,0.000022564509,0.0012047652,0.000074665935,0.0019010204,0.9824769,0.006937237,0.0006952878,0.0049516433],"study_design_scores_gemma":[0.00010617689,0.00052790524,0.008669957,0.000031672258,0.00003808955,0.002317862,0.00013700296,0.014089837,0.9605888,0.0033095616,0.010149211,0.00003391087],"about_ca_topic_score_codex":0.00059308315,"about_ca_topic_score_gemma":0.00049281167,"teacher_disagreement_score":0.0022501445,"about_ca_system_score_codex":0.0005139237,"about_ca_system_score_gemma":0.0003465928,"threshold_uncertainty_score":0.0075274706},"labels":[],"label_agreement":null},{"id":"W2046063008","doi":"10.1177/0961203313498800","title":"Dysregulation of the immune system in Aicardi-Goutières syndrome: another example in a TREX1-mutated patient","year":2013,"lang":"en","type":"article","venue":"Lupus","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"","keywords":"Medicine; Antiphospholipid syndrome; Immunology; Encephalopathy; Disease; Immune system; Thyroiditis; Autoimmune thyroiditis; Antibody; Pathology; Internal medicine","score_opus":0.006892274713689697,"score_gpt":0.189274867583244,"score_spread":0.1823825928695543,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046063008","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930547,0.0007669176,0.00082842074,0.0006548087,0.000045789347,0.000040008745,0.000092278606,0.00009236084,0.0044247247],"genre_scores_gemma":[0.99835783,0.00029432317,0.0005332115,0.0002473708,0.000092133574,0.0000074149793,0.00003993044,0.000014449494,0.0004133918],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9997398,0.000042296084,0.000034748802,0.00006910579,0.000038797567,0.00007512294],"domain_scores_gemma":[0.9993042,0.0003331007,0.000092976035,0.000044852437,0.000040210452,0.0001846223],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002454921,0.0012142239,0.00068902853,0.0014852074,0.0011233686,0.00063635857,0.00047950537,0.00252155,0.0017730732],"category_scores_gemma":[0.0012961074,0.0003435403,0.0005134294,0.000621737,0.00081640267,0.0004945139,0.0005647032,0.0010981953,0.00041709485],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012660176,0.000057084235,0.026236728,0.000039894912,0.000018539326,0.9630272,0.000539395,0.00007712398,0.00723237,0.00019350155,0.0002350127,0.0022165447],"study_design_scores_gemma":[0.000016649275,0.00006742017,0.013499612,0.000009215549,0.000020584832,0.9841627,0.00008157484,0.00021931852,0.0013109145,0.000120710276,0.00048077962,0.000010484825],"about_ca_topic_score_codex":0.00088725274,"about_ca_topic_score_gemma":0.0007289053,"teacher_disagreement_score":0.00252155,"about_ca_system_score_codex":0.00032156776,"about_ca_system_score_gemma":0.00020685968,"threshold_uncertainty_score":0.0059314966},"labels":[],"label_agreement":null},{"id":"W2046188448","doi":"10.4161/cc.9.5.11156","title":"Deregulation of innate immune signaling in myelodysplastic syndromes is associated with deletion of chromosome arm 5q","year":2010,"lang":"en","type":"editorial","venue":"Cell Cycle","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency","funders":"Canadian Institutes of Health Research","keywords":"Biology; Innate immune system; Myelodysplastic syndromes; Signal transduction; Immune system; Chromosome; Genetics; Deregulation; Immunology; Cancer research; Cell biology; Bioinformatics; Gene","score_opus":0.005268120673409291,"score_gpt":0.2151733079908467,"score_spread":0.2099051873174374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046188448","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003699896,0.033542875,0.00049542525,0.14880084,0.8146296,0.000027508495,0.0001443696,0.00012107364,0.001868285],"genre_scores_gemma":[0.0024726049,0.018204287,0.00033465523,0.07899079,0.89276993,0.00002897006,0.00008201842,0.00003632163,0.007080409],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99875104,0.00022730087,0.00023517598,0.00021615566,0.00046615343,0.00010423647],"domain_scores_gemma":[0.994833,0.0024844152,0.0003063173,0.00012217108,0.0016856131,0.00056849065],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003596098,0.0022729773,0.0028058845,0.0013051777,0.0012104622,0.0021292516,0.002619315,0.0101237055,0.0027838992],"category_scores_gemma":[0.006548807,0.00071304064,0.0013897994,0.00064440403,0.0016254862,0.0024661312,0.0008846396,0.017871708,0.0027868277],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015503293,0.00001779886,0.00017352452,0.00033678985,0.00004387462,0.00090783014,0.000026806058,0.00003705298,0.00033299314,0.00047819674,0.98292464,0.014565484],"study_design_scores_gemma":[0.00020974995,0.00016670035,0.0022288365,0.00063205796,0.00026369578,0.0036419234,0.0000961957,0.00037961436,0.000885295,0.0016411834,0.9897915,0.0000632357],"about_ca_topic_score_codex":0.0013368827,"about_ca_topic_score_gemma":0.0033839776,"teacher_disagreement_score":0.0101237055,"about_ca_system_score_codex":0.0016465848,"about_ca_system_score_gemma":0.0010655036,"threshold_uncertainty_score":0.019018233},"labels":[],"label_agreement":null},{"id":"W2046622062","doi":"10.1016/j.virol.2011.01.034","title":"RNA species generated in vaccinia virus infected cells activate cell type-specific MDA5 or RIG-I dependent interferon gene transcription and PKR dependent apoptosis","year":2011,"lang":"en","type":"article","venue":"Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CancerCare Manitoba; Public Health Agency of Canada; University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Research Manitoba; Public Health Agency; Public Health Agency of Canada; Manitoba Health Research Council","keywords":"Biology; RIG-I; MDA5; Protein kinase R; Interferon; Innate immune system; Transcription (linguistics); RNA; Virology; Cell biology; Pattern recognition receptor; RNA silencing; Interferon type I; Gene expression; Gene; Molecular biology; Signal transduction; Receptor; RNA interference; Genetics; Mitogen-activated protein kinase kinase; Protein kinase C","score_opus":0.033265015694035546,"score_gpt":0.22072705449790134,"score_spread":0.1874620388038658,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046622062","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9766376,0.0027147867,0.01298364,0.00028746857,0.00046245963,0.00014761728,0.00079769647,0.00016132323,0.005807385],"genre_scores_gemma":[0.9861101,0.0007514105,0.0072237737,0.00018170821,0.00009091179,0.00006942015,0.0015502394,0.000056091445,0.0039664144],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995732,0.00011049586,0.000035773646,0.0000855489,0.000076538025,0.00011849129],"domain_scores_gemma":[0.99968433,0.000119338496,0.00005890177,0.000053895805,0.000037610553,0.0000459573],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054500095,0.00070956995,0.00028614883,0.00046604485,0.0003038189,0.00061879476,0.00026443595,0.0007080515,0.0024225714],"category_scores_gemma":[0.00031966405,0.00029863731,0.00083979074,0.00018153714,0.0004008464,0.00037976867,0.0002694463,0.0013893236,0.0009877698],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008116444,0.000016224622,0.00007080768,0.00002811806,0.000007149617,0.000040459625,0.000014781412,0.000034819717,0.9990133,0.00025552718,0.000028171231,0.0004094196],"study_design_scores_gemma":[0.000012477246,0.00015830547,0.00057870016,0.000005649103,0.000011716437,0.000082761595,0.000019768744,0.00020536111,0.99798524,0.00008245293,0.00085470814,0.0000028580494],"about_ca_topic_score_codex":0.00019411874,"about_ca_topic_score_gemma":0.00030687702,"teacher_disagreement_score":0.0024225714,"about_ca_system_score_codex":0.0006821345,"about_ca_system_score_gemma":0.00023114451,"threshold_uncertainty_score":0.008104324},"labels":[],"label_agreement":null},{"id":"W2046970848","doi":"10.1128/jvi.78.19.10636-10649.2004","title":"Activation of TBK1 and IKKε Kinases by Vesicular Stomatitis Virus Infection and the Role of Viral Ribonucleoprotein in the Development of Interferon Antiviral Immunity","year":2004,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":183,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; McGill University","funders":"National Cancer Institute; Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Biology; TANK-binding kinase 1; Vesicular stomatitis virus; Kinase; Viral replication; Cell biology; Interferon; Signal transduction; IκB kinase; Virology; Virus; Protein kinase A; Cyclin-dependent kinase 2; NF-κB","score_opus":0.0048976048392832565,"score_gpt":0.2213204072434112,"score_spread":0.21642280240412795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046970848","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98332155,0.012902578,0.002113181,0.00011297621,0.000028352595,0.000015263415,0.00016902997,0.000023070752,0.0013140179],"genre_scores_gemma":[0.9953458,0.0025122873,0.00087253796,0.000024291752,0.000010290574,0.000017626793,0.00022621307,0.000004291701,0.0009866084],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998553,0.000027482462,0.00001595397,0.000027796552,0.000025802443,0.000047677924],"domain_scores_gemma":[0.99994683,0.000009350552,0.00001821038,0.0000074897503,0.000005575111,0.000012464152],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015721949,0.00036527074,0.00018052064,0.0002100867,0.00020165916,0.0003881562,0.00015455499,0.00031338123,0.00059007143],"category_scores_gemma":[0.00008853276,0.00016598939,0.00037942905,0.00010755234,0.00026949664,0.00030319995,0.00021808356,0.00038894685,0.00024400333],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011575771,0.0000132083205,0.0007241954,0.000054862103,0.0000046984997,0.000092354894,0.000017728773,0.00007191426,0.9977875,0.0002135249,0.000012746853,0.0008914716],"study_design_scores_gemma":[0.00001717214,0.0001764643,0.026096806,0.000013361082,0.000023328445,0.0008833676,0.00009279817,0.0013047901,0.9687871,0.00028918165,0.0023060488,0.000009578778],"about_ca_topic_score_codex":0.0004585253,"about_ca_topic_score_gemma":0.00048634558,"teacher_disagreement_score":0.00059007143,"about_ca_system_score_codex":0.00044813167,"about_ca_system_score_gemma":0.00021165497,"threshold_uncertainty_score":0.003251493},"labels":[],"label_agreement":null},{"id":"W2047537048","doi":"10.1016/s1359-6101(00)00025-3","title":"Viral proteins and the mitochondrial apoptotic checkpoint","year":2001,"lang":"en","type":"review","venue":"Cytokine & Growth Factor Reviews","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; University of Alberta","funders":"National Cancer Institute; Medical Research Council; University of Alberta","keywords":"Apoptosis; Cell biology; Mitochondrion; Biology; Programmed cell death; Intrinsic apoptosis; Bcl-2 family; Caspase; Genetics","score_opus":0.04297836093846105,"score_gpt":0.3045190798266115,"score_spread":0.26154071888815045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047537048","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00014905995,0.99622405,0.00028667136,0.00056674844,0.001231804,0.0000054096045,0.000010954361,0.000011117395,0.0015140696],"genre_scores_gemma":[0.0010651274,0.9947495,0.00024961794,0.00046246574,0.001204867,0.000010844439,0.000033502187,0.0000021996918,0.0022220246],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998385,0.000025777243,0.000018933928,0.000028221051,0.00006628144,0.000022239179],"domain_scores_gemma":[0.9997346,0.00011011089,0.000034722718,0.000011507711,0.00006954985,0.00003950345],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006473643,0.0013784419,0.0015999638,0.001349548,0.00045875742,0.0014230899,0.001247751,0.0018586419,0.0030753259],"category_scores_gemma":[0.00048637358,0.00037045332,0.00032801557,0.0015506181,0.0010167446,0.002282078,0.0008486346,0.0029320342,0.0031223064],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003359178,0.0000962355,0.00018735186,0.0054724235,0.000056393583,0.00063979777,0.00007028201,0.00059284107,0.009679674,0.010090422,0.07947163,0.893307],"study_design_scores_gemma":[0.00003585928,0.000060151353,0.00036136823,0.00069914875,0.000036632893,0.0010302895,0.000048679078,0.000085153646,0.0012467116,0.0044967197,0.9918873,0.000012001874],"about_ca_topic_score_codex":0.0008017153,"about_ca_topic_score_gemma":0.0016938798,"teacher_disagreement_score":0.0030753259,"about_ca_system_score_codex":0.0011448626,"about_ca_system_score_gemma":0.000817625,"threshold_uncertainty_score":0.010288},"labels":[],"label_agreement":null},{"id":"W2048199063","doi":"10.1126/scitranslmed.3010501","title":"Bridging Lipid Metabolism and Innate Host Defense","year":2014,"lang":"en","type":"letter","venue":"Science Translational Medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"","keywords":"Innate immune system; Lipid metabolism; Bridging (networking); Metabolism; Cell biology; Biology; Chemistry; Immunology; Biochemistry; Computer science; Computer security; Immune system","score_opus":0.02008244164929381,"score_gpt":0.2676699492534346,"score_spread":0.2475875076041408,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048199063","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006668839,0.0062956214,0.00021380087,0.96586144,0.025108548,0.000009577468,0.000026274705,0.000043524484,0.0017743743],"genre_scores_gemma":[0.013188281,0.008035426,0.0006366155,0.8523043,0.117261365,0.000049800252,0.000031371386,0.00002367201,0.0084691765],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99838877,0.00057279674,0.00013219993,0.00018785866,0.0005428944,0.00017553908],"domain_scores_gemma":[0.9965323,0.0020005663,0.00020695447,0.0001911351,0.0005729934,0.0004960959],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021404924,0.00072126166,0.0011137447,0.00038067612,0.0018234773,0.002468914,0.0011514028,0.022236882,0.005165998],"category_scores_gemma":[0.010248142,0.00044260608,0.0007487129,0.0002665676,0.0027598615,0.0029376685,0.0015790631,0.029586894,0.0044565024],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015691253,0.000080017446,0.00043956787,0.00009067043,0.00002208138,0.002309413,0.00008053298,0.00012573539,0.0011108667,0.005050831,0.9547564,0.03577694],"study_design_scores_gemma":[0.00030305088,0.0001971734,0.0010066432,0.0002696673,0.000028282719,0.0038533465,0.00023364485,0.00087513484,0.0010823671,0.030583028,0.96151954,0.000048164333],"about_ca_topic_score_codex":0.0010505009,"about_ca_topic_score_gemma":0.0015895125,"teacher_disagreement_score":0.022236882,"about_ca_system_score_codex":0.0024977517,"about_ca_system_score_gemma":0.0017016788,"threshold_uncertainty_score":0.018122494},"labels":[],"label_agreement":null},{"id":"W2048974591","doi":"10.1038/cr.2011.2","title":"A functional C-terminal TRAF3-binding site in MAVS participates in positive and negative regulation of the IFN antiviral response","year":2011,"lang":"en","type":"article","venue":"Cell Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":149,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Agence Nationale de la Recherche; Canadian Institutes of Health Research; Health Canada; Canadian Foundation for AIDS Research; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Biology; Vesicular stomatitis virus; RIG-I; Cell biology; Interferon; Sendai virus; Signal transduction; Kinase; Molecular biology; Virology; Innate immune system; Receptor; Genetics; Virus","score_opus":0.08619522089264033,"score_gpt":0.3221821212348892,"score_spread":0.2359869003422489,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048974591","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99012053,0.001319234,0.0060934746,0.0001978218,0.000073595635,0.000024865178,0.00040388876,0.00010565075,0.0016607651],"genre_scores_gemma":[0.99672997,0.00010186932,0.0015453266,0.00006979177,0.000018220166,0.000009016057,0.00047202242,0.000015834725,0.001037972],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997862,0.00004845478,0.000020041576,0.000037523452,0.000048256297,0.000059567552],"domain_scores_gemma":[0.9996556,0.00005817802,0.00007120938,0.000051440973,0.00005031331,0.00011325883],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031695986,0.0004894571,0.0003467131,0.00025804527,0.0006303561,0.0006166086,0.0004930952,0.0008619279,0.00286036],"category_scores_gemma":[0.0003573368,0.00018372799,0.0007607627,0.00015985475,0.0005142684,0.0004917085,0.00033012408,0.0010231248,0.0016940216],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00053321006,0.00001890501,0.00030523332,0.000031053467,0.000008722105,0.00018178577,0.000016668424,0.00014425848,0.99663997,0.000794689,0.00006031957,0.0012652078],"study_design_scores_gemma":[0.0001236944,0.00023349805,0.023403045,0.000027266748,0.000046386904,0.0024333238,0.000097748285,0.0041574356,0.96293265,0.0017375061,0.004757095,0.000050309834],"about_ca_topic_score_codex":0.0009785868,"about_ca_topic_score_gemma":0.0010494081,"teacher_disagreement_score":0.00286036,"about_ca_system_score_codex":0.00074812956,"about_ca_system_score_gemma":0.00047388618,"threshold_uncertainty_score":0.00956887},"labels":[],"label_agreement":null},{"id":"W2048989142","doi":"10.1186/1471-2407-7-52","title":"Silencing of the XAF1 gene by promoter hypermethylation in cancer cells and reactivation to TRAIL-sensitization by IFN-β","year":2007,"lang":"en","type":"article","venue":"BMC Cancer","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Royal Society; Royal Society of Canada; CHEO Research Institute; Howard Hughes Medical Institute","keywords":"DNA methylation; Biology; Methylation; Gene silencing; CpG site; Cancer research; Carcinogenesis; Promoter; Molecular biology; Bisulfite sequencing; Gene expression; Cancer; Gene; Genetics","score_opus":0.012885245110966583,"score_gpt":0.26359722867318897,"score_spread":0.2507119835622224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048989142","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99643147,0.0014756209,0.001285433,0.000028303926,0.000007885791,0.000015660844,0.00035040762,0.000034649736,0.00037045116],"genre_scores_gemma":[0.9968952,0.00059246545,0.0010070199,0.000015751131,0.0000028276336,0.000029794457,0.00062343443,0.0000062790177,0.0008271576],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991226,0.000011227415,0.000011502196,0.00002440781,0.000022796361,0.000017929675],"domain_scores_gemma":[0.9999188,0.000012678154,0.000028991262,0.000016156531,0.000011715382,0.000011742026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011648034,0.00019238409,0.0002148357,0.00019737783,0.00013197312,0.00017271248,0.0001076876,0.00018843308,0.0007018242],"category_scores_gemma":[0.00013362768,0.000113939925,0.00020692381,0.00015619698,0.0001385777,0.00007934252,0.00011316928,0.00026859267,0.00022111008],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010606711,0.000008973423,0.0008637504,0.000014735645,0.0000053028293,0.000029993707,0.000021692826,0.00004196742,0.99799097,0.00001642288,0.000016953281,0.00088307576],"study_design_scores_gemma":[0.0000073506417,0.00022952714,0.02411417,0.000004646118,0.00001574926,0.00037728326,0.000039981616,0.0005491958,0.97358525,0.000020073117,0.0010535979,0.0000032039313],"about_ca_topic_score_codex":0.0017366615,"about_ca_topic_score_gemma":0.0018211293,"teacher_disagreement_score":0.0017366615,"about_ca_system_score_codex":0.00026165167,"about_ca_system_score_gemma":0.0002090961,"threshold_uncertainty_score":0.003453076},"labels":[],"label_agreement":null},{"id":"W2049037429","doi":"10.1111/jvh.12131","title":"Micro<scp>RNA</scp>‐130a inhibits <scp>HCV</scp> replication by restoring the innate immune response","year":2013,"lang":"en","type":"article","venue":"Journal of Viral Hepatitis","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto","funders":"","keywords":"Innate immune system; Replicon; Hepatitis C virus; Virology; Interferon; Biology; Immune system; TLR3; RIG-I; Viral replication; Ribavirin; TLR7; RNA interference; RNA; Immunology; Cancer research; Virus; Gene; Toll-like receptor; Genetics","score_opus":0.009506902693502474,"score_gpt":0.24035488364438548,"score_spread":0.23084798095088302,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049037429","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98579025,0.003444516,0.0054285824,0.0002720255,0.000108153305,0.000066154666,0.00028840854,0.00029611564,0.0043057315],"genre_scores_gemma":[0.99260676,0.001045355,0.00376195,0.0001031677,0.00003058086,0.000032815988,0.00034697488,0.00002561138,0.002046812],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999305,0.00001389416,0.0000048244924,0.000012641164,0.000026515056,0.0000117615755],"domain_scores_gemma":[0.9999527,0.0000112411535,0.000012624674,0.0000051747807,0.00000639069,0.000011779628],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010630898,0.0002076846,0.00015872474,0.0001565132,0.00009965701,0.00017330883,0.00009576092,0.00013801752,0.0014450724],"category_scores_gemma":[0.00010378878,0.0000733097,0.00020558338,0.00007104054,0.00021166305,0.00011347736,0.000091851885,0.0003704085,0.00040109467],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007822049,0.000030556483,0.00015226532,0.000024551326,0.0000042083398,0.000018832181,0.000004316651,0.00005942699,0.99582076,0.000105481464,0.00009223881,0.0036091523],"study_design_scores_gemma":[0.000020516069,0.0005781456,0.0027361123,0.000005089078,0.000012612659,0.00022197921,0.0000090702215,0.00080746267,0.9906634,0.00008744181,0.0048540584,0.000004041441],"about_ca_topic_score_codex":0.0002726013,"about_ca_topic_score_gemma":0.0005314205,"teacher_disagreement_score":0.0014450724,"about_ca_system_score_codex":0.00013009805,"about_ca_system_score_gemma":0.00018465934,"threshold_uncertainty_score":0.0048342943},"labels":[],"label_agreement":null},{"id":"W2049404118","doi":"10.1016/j.virol.2014.08.001","title":"Cell migration is another player of the minute virus of mice infection","year":2014,"lang":"en","type":"article","venue":"Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Michael Smith Health Research BC","keywords":"Biology; Virology; Virus; Cell; Cell biology; Genetics","score_opus":0.007375261856900993,"score_gpt":0.20589071522969027,"score_spread":0.19851545337278928,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049404118","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96987265,0.010069726,0.008337717,0.001561536,0.00060595357,0.000034252917,0.00020836688,0.00015361783,0.009156095],"genre_scores_gemma":[0.9935261,0.0016792042,0.0014572269,0.00015050947,0.00010464892,0.000019752846,0.000073198076,0.000012058792,0.002977315],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997789,0.00005204934,0.000008539707,0.000032091142,0.000047501104,0.000080798935],"domain_scores_gemma":[0.99987924,0.000019803203,0.000028035469,0.000018019746,0.000013640469,0.000041362986],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018220374,0.00037763448,0.00024752086,0.0003093445,0.0003836663,0.0005385502,0.0002051154,0.00051913684,0.0010684615],"category_scores_gemma":[0.0001799156,0.000094987234,0.00021281917,0.00008483183,0.00044961556,0.0004314612,0.0003576088,0.0009561227,0.00016139477],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040425267,0.000036095407,0.001282158,0.0000871647,0.000011235143,0.00023810774,0.00012050257,0.00008552355,0.97950816,0.0098490575,0.00048558688,0.007892136],"study_design_scores_gemma":[0.00008083601,0.001333781,0.0299338,0.000108301334,0.00009069477,0.0027851348,0.00096013653,0.0031878194,0.90197265,0.011807234,0.04768923,0.000050424005],"about_ca_topic_score_codex":0.0001955915,"about_ca_topic_score_gemma":0.00018665881,"teacher_disagreement_score":0.0010684615,"about_ca_system_score_codex":0.00027102613,"about_ca_system_score_gemma":0.00015452509,"threshold_uncertainty_score":0.0035743713},"labels":[],"label_agreement":null},{"id":"W2049925231","doi":"10.1038/mi.2013.128","title":"Human rhinovirus-induced ISG15 selectively modulates epithelial antiviral immunity","year":2014,"lang":"en","type":"article","venue":"Mucosal Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Alberta Innovates; GlaxoSmithKline","keywords":"ISG15; Innate immune system; Interferon-stimulated gene; Biology; Interferon; Rhinovirus; Immunology; CXCL10; Proinflammatory cytokine; Cell biology; Immunity; Immune system; Secretion; Chemokine; Gene; Virus; Inflammation; Ubiquitin; Genetics; Endocrinology","score_opus":0.0157180722924485,"score_gpt":0.25940380476151775,"score_spread":0.24368573246906924,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049925231","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982634,0.0008336762,0.00016608652,0.000039845716,0.00001825798,0.000010946386,0.000074749274,0.000007965663,0.00058517203],"genre_scores_gemma":[0.99871457,0.00034503505,0.00019436228,0.00006946266,0.0000071021914,0.000009333145,0.00018629814,0.000003386171,0.00047056875],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985695,0.000037567002,0.000010189779,0.00002253645,0.000022931943,0.00004996488],"domain_scores_gemma":[0.99993527,0.000009608081,0.0000143554,0.000009057361,0.000007981013,0.000023790846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001468579,0.00015992092,0.00019201133,0.00012748671,0.000070999624,0.00022602905,0.000078177574,0.00019925075,0.0008341057],"category_scores_gemma":[0.00010652655,0.000057437694,0.00024480725,0.0000825321,0.00018075558,0.00013442899,0.00013441643,0.0002871567,0.00019815491],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003729697,0.00003411318,0.0013380883,0.000029922077,0.00000717743,0.000055624045,0.000012023372,0.000024136476,0.99645966,0.00003369868,0.00004142555,0.001591071],"study_design_scores_gemma":[0.00008604524,0.0022507259,0.12174824,0.00004005282,0.000059647973,0.0007341652,0.00017502162,0.00073520566,0.8710837,0.00014019152,0.0029374715,0.000009596042],"about_ca_topic_score_codex":0.00019401807,"about_ca_topic_score_gemma":0.00034120833,"teacher_disagreement_score":0.0008341057,"about_ca_system_score_codex":0.0001995095,"about_ca_system_score_gemma":0.00011565734,"threshold_uncertainty_score":0.0027903914},"labels":[],"label_agreement":null},{"id":"W2050415693","doi":"10.1016/j.cyto.2011.07.133","title":"PS1-100 Direct induction of the viral restriction factor and negative regulator of the interferon pathway, BST-2/Tetherin, by virus-activated IRF proteins prior to interferon signaling","year":2011,"lang":"en","type":"article","venue":"Cytokine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"","keywords":"Tetherin; Interferon; Regulator; Interferon regulatory factors; IRF1; Virology; Biology; SAMHD1; Cell biology; Virus; Transcription factor; Genetics; Viral envelope; Gene; RNA","score_opus":0.02249873246153909,"score_gpt":0.2270585329883022,"score_spread":0.20455980052676312,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050415693","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98923826,0.0012568766,0.0028021757,0.00027489557,0.00009271591,0.000033143697,0.00043648874,0.00013881296,0.0057267235],"genre_scores_gemma":[0.991791,0.00040648648,0.0009728416,0.00009555713,0.000020093708,0.000028943632,0.0007367886,0.00003149127,0.005916803],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998055,0.000026270953,0.000010446117,0.00002583267,0.00005229583,0.000079579484],"domain_scores_gemma":[0.99987686,0.00004127289,0.00001776295,0.000022572905,0.000010503925,0.0000310681],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000108806504,0.0003166183,0.00022031208,0.00020063538,0.00017935192,0.0003979031,0.00018889632,0.00034358993,0.003111798],"category_scores_gemma":[0.00016733682,0.00016704797,0.00028318106,0.00015210365,0.00031897027,0.00031742404,0.00021429193,0.0013106464,0.0009657471],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014602805,0.000027975977,0.00006117606,0.00001421939,0.0000016259144,0.000031120533,0.0000071893633,0.000032286254,0.9989029,0.00018348974,0.0000558598,0.0005360738],"study_design_scores_gemma":[0.000013861282,0.00006708375,0.0013999012,0.000002215245,0.0000024098786,0.000054327058,0.000013403411,0.00030121015,0.99704033,0.00005742176,0.0010461115,0.0000017234931],"about_ca_topic_score_codex":0.0007958251,"about_ca_topic_score_gemma":0.0016177439,"teacher_disagreement_score":0.003111798,"about_ca_system_score_codex":0.00060558866,"about_ca_system_score_gemma":0.0004085943,"threshold_uncertainty_score":0.010410011},"labels":[],"label_agreement":null},{"id":"W2051605758","doi":"10.1089/jir.2009.0074","title":"Mechanisms Employed by Herpes Simplex Virus 1 to Inhibit the Interferon Response","year":2009,"lang":"en","type":"review","venue":"Journal of Interferon & Cytokine Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":101,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Herpes simplex virus; Interferon; Biology; Virology; Immune system; Innate immune system; Virus; HSL and HSV; Immunology","score_opus":0.10204918968458222,"score_gpt":0.42677723520344696,"score_spread":0.32472804551886475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051605758","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0013868558,0.99212486,0.0010284102,0.00022371822,0.00027799205,0.000023464872,0.00003677901,0.000033141623,0.004864869],"genre_scores_gemma":[0.0065187914,0.98962396,0.0010094981,0.00018847437,0.0001852401,0.000035597823,0.000058844173,0.0000038604257,0.0023757291],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99985576,0.000019317371,0.000014460661,0.000027543454,0.00006441125,0.00001853557],"domain_scores_gemma":[0.9999409,0.000015284477,0.000014929787,0.000003314092,0.000016787948,0.000008803528],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000283869,0.00077169057,0.0009273417,0.0011604152,0.00026000044,0.00068625057,0.00073577446,0.0007330728,0.0017449055],"category_scores_gemma":[0.00017651642,0.00022557823,0.00031276906,0.0009315681,0.0003821358,0.0008334554,0.00041163832,0.00094241794,0.0027798647],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013047845,0.00007759806,0.0002846359,0.009069797,0.00007480038,0.00057492766,0.000112494476,0.00049505173,0.057744626,0.01129443,0.010233947,0.9099073],"study_design_scores_gemma":[0.00004024031,0.0001931931,0.0012746162,0.0009969565,0.000057542613,0.0026554405,0.00006198813,0.00016235244,0.02233458,0.0033957008,0.96880126,0.000026020103],"about_ca_topic_score_codex":0.0003343436,"about_ca_topic_score_gemma":0.0004231425,"teacher_disagreement_score":0.0017449055,"about_ca_system_score_codex":0.0006083243,"about_ca_system_score_gemma":0.00043517424,"threshold_uncertainty_score":0.0058372617},"labels":[],"label_agreement":null},{"id":"W2052532639","doi":"10.1016/s0022-1910(03)00055-6","title":"Three related TrIV genes: comparative sequence analysis and expression in host larvae and Cf-124T cells","year":2003,"lang":"en","type":"article","venue":"Journal of Insect Physiology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Université Laval; Natural Resources Canada; Canadian Forest Service","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Host (biology); Gene; Sequence (biology); Genetics; Larva; Expression (computer science); Sequence analysis; Evolutionary biology; Computational biology; Ecology","score_opus":0.02862846589530385,"score_gpt":0.2701048769594242,"score_spread":0.24147641106412035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052532639","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930496,0.0018313647,0.0014742061,0.00007992666,0.00002413416,0.00003167197,0.0011102789,0.000034617275,0.0023641672],"genre_scores_gemma":[0.9771453,0.0014527749,0.0029689448,0.00019042777,0.000027586046,0.00008884425,0.008954462,0.000059692557,0.009111931],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998559,0.000011802437,0.000010947195,0.00003584965,0.000024229066,0.00006126058],"domain_scores_gemma":[0.9997328,0.00005689062,0.000056480098,0.000025589747,0.000054783122,0.000073404466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000099837736,0.00032346422,0.00032092578,0.0006292486,0.0003844218,0.00073589676,0.00030227922,0.00048627445,0.00197256],"category_scores_gemma":[0.00016816924,0.00023032744,0.00048103143,0.0004414208,0.00025368624,0.00037911884,0.00029283128,0.00088079553,0.00095799833],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012167662,0.000008388162,0.0002605527,0.000014015535,0.0000031295829,0.00005086366,0.000023237608,0.000015366315,0.9989242,0.000070412294,0.000019055782,0.00048905495],"study_design_scores_gemma":[0.000057247245,0.0008369697,0.102307856,0.000043911867,0.0001135012,0.0026376625,0.00072743156,0.0013590205,0.8822186,0.00024842678,0.009414953,0.000034538913],"about_ca_topic_score_codex":0.0010727799,"about_ca_topic_score_gemma":0.0011383404,"teacher_disagreement_score":0.00197256,"about_ca_system_score_codex":0.00056248705,"about_ca_system_score_gemma":0.00028805665,"threshold_uncertainty_score":0.00659883},"labels":[],"label_agreement":null},{"id":"W2052935216","doi":"10.4161/cc.11.6.19611","title":"Saquinavir-NO-targeted S6 protein mediates sensitivity of androgen-dependent prostate cancer cells to TRAIL","year":2012,"lang":"en","type":"article","venue":"Cell Cycle","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"Science and Engineering Research Board","keywords":"LNCaP; XIAP; Biology; Cancer research; Cell growth; Apoptosis; Protein kinase B; Prostate cancer; Cancer cell; Cell cycle; Programmed cell death; Cancer; Caspase; Biochemistry","score_opus":0.0078089664702017765,"score_gpt":0.23063916355248446,"score_spread":0.2228301970822827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052935216","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954259,0.002524424,0.0008293367,0.00008439089,0.000024430181,0.000013447771,0.0001697441,0.000029269117,0.00089908205],"genre_scores_gemma":[0.9981129,0.0006324121,0.00026958116,0.000027643231,0.000005927859,0.000007499093,0.00020346182,0.0000027304857,0.0007377647],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993706,0.00001697439,0.000004938623,0.000008781524,0.000016954393,0.000015337102],"domain_scores_gemma":[0.99995506,0.000007545964,0.000012076818,0.000005705653,0.0000063175767,0.000013363512],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006886511,0.0001358927,0.0001421922,0.00008373405,0.00010707302,0.00014374481,0.00010134029,0.00014465394,0.0009039858],"category_scores_gemma":[0.00006528739,0.00005777587,0.00018427765,0.0000628958,0.000116788746,0.00007102374,0.00008888822,0.00025275818,0.00024679975],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014727077,0.000030260722,0.00023952736,0.00003754289,0.0000041703734,0.000044064964,0.000010760618,0.000086540436,0.9984084,0.000058745693,0.000052211893,0.0008806095],"study_design_scores_gemma":[0.000025937617,0.0008313818,0.009228888,0.0000086452,0.00001115497,0.0004784041,0.000032724678,0.001316746,0.9842976,0.00005680233,0.0037062794,0.0000054399316],"about_ca_topic_score_codex":0.000376644,"about_ca_topic_score_gemma":0.00055937946,"teacher_disagreement_score":0.0009039858,"about_ca_system_score_codex":0.00013167835,"about_ca_system_score_gemma":0.000112984475,"threshold_uncertainty_score":0.0030241609},"labels":[],"label_agreement":null},{"id":"W2053184601","doi":"10.1371/journal.ppat.1001016","title":"Rabies Virus Infection Induces Type I Interferon Production in an IPS-1 Dependent Manner While Dendritic Cell Activation Relies on IFNAR Signaling","year":2010,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":115,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"McGill University; National Institutes of Health; Thomas Jefferson University; National Institute of Allergy and Infectious Diseases; Ohio State University","keywords":"Biology; Rabies virus; Virology; Interferon; Interferon type I; Viral replication; Virus; Receptor; Cell biology; Immunology","score_opus":0.028197726896958847,"score_gpt":0.2507339972844354,"score_spread":0.22253627038747656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053184601","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923459,0.0012757212,0.0018952584,0.0001200269,0.000043573258,0.00005769068,0.0016057155,0.00007377435,0.0025823072],"genre_scores_gemma":[0.98800665,0.0012997069,0.0027056653,0.0001446048,0.000019425559,0.0001083511,0.0027010452,0.000034032564,0.004980587],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998041,0.000020928986,0.000022273858,0.00003287308,0.000055127493,0.000064648295],"domain_scores_gemma":[0.9998858,0.000022611632,0.000031317457,0.00001784733,0.000015846397,0.000026535447],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011894065,0.00040490914,0.00031301545,0.00022260964,0.00011297974,0.00027240926,0.00016217596,0.00029776024,0.0014484603],"category_scores_gemma":[0.00007151013,0.00014538394,0.00039634536,0.00014745229,0.00020035628,0.00020399569,0.00017550796,0.0009999397,0.00059317506],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000653251,0.0000196995,0.000119982455,0.000026751924,0.0000027183405,0.000032183663,0.000008797299,0.000020721413,0.9992754,0.00003240189,0.000020464266,0.0003756116],"study_design_scores_gemma":[0.000009385112,0.00015444281,0.0044816677,0.000007658175,0.000011283958,0.00014267668,0.000025025629,0.00029901913,0.99380857,0.000031380732,0.001025856,0.000002983756],"about_ca_topic_score_codex":0.00025941042,"about_ca_topic_score_gemma":0.0004337001,"teacher_disagreement_score":0.0014484603,"about_ca_system_score_codex":0.00023667474,"about_ca_system_score_gemma":0.00013790136,"threshold_uncertainty_score":0.0048455596},"labels":[],"label_agreement":null},{"id":"W2053574623","doi":"10.1016/s0888-7543(03)00103-4","title":"Molecular cloning, structural analysis, and expression of a human IRLB, MYC promoter-binding protein: new DENN domain-containing protein family emerges☆","year":2003,"lang":"en","type":"article","venue":"Genomics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Supratek Pharma (Canada)","funders":"","keywords":"Biology; Genetics; Gene; Caenorhabditis elegans; Molecular biology; Alternative splicing; Exon; Complementary DNA; Protein family; Protein domain","score_opus":0.011033296535645266,"score_gpt":0.2459033161088492,"score_spread":0.23487001957320391,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053574623","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9859081,0.0019960448,0.00886964,0.00025750053,0.000041104555,0.000035431804,0.0012263301,0.00007921426,0.0015864918],"genre_scores_gemma":[0.9567137,0.0021049774,0.018491045,0.00014861995,0.000039731913,0.000042342952,0.0131878415,0.00007306876,0.009198773],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999546,0.00000450467,0.0000033656472,0.000014350093,0.000011873477,0.000011339589],"domain_scores_gemma":[0.99991965,0.000017215603,0.000014453961,0.000008689128,0.0000134770835,0.000026498663],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013846041,0.00023458585,0.00024819697,0.00014079943,0.00022415974,0.0002795516,0.00023820168,0.00019768653,0.00074045727],"category_scores_gemma":[0.00009739762,0.0001459416,0.00029283378,0.0001987648,0.00020953477,0.00018389343,0.00013591406,0.0005311853,0.00061630335],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019293204,0.000036981564,0.00038736337,0.000044517932,0.0000058969954,0.00014276571,0.000040939238,0.00007993543,0.9969658,0.000214966,0.00011595374,0.0017719625],"study_design_scores_gemma":[0.000047810998,0.00018469233,0.016925104,0.000015424035,0.000053413576,0.0018843954,0.00010067437,0.00146844,0.95952564,0.0003066943,0.019472357,0.000015349447],"about_ca_topic_score_codex":0.0009246987,"about_ca_topic_score_gemma":0.0011016154,"teacher_disagreement_score":0.0009246987,"about_ca_system_score_codex":0.00032645042,"about_ca_system_score_gemma":0.00026234885,"threshold_uncertainty_score":0.0024771094},"labels":[],"label_agreement":null},{"id":"W2054548447","doi":"10.1016/j.smim.2009.05.009","title":"The role of mitochondria in cellular defense against microbial infection","year":2009,"lang":"en","type":"review","venue":"Seminars in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":104,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Canada Research Chairs","funders":"Canadian Institutes of Health Research; Burroughs Wellcome Fund","keywords":"Mitochondrion; Innate immune system; Cell biology; Biology; Organelle; Immune system; Signal transduction; Cell; Programmed cell death; Immunology; Apoptosis; Genetics","score_opus":0.009292557816320315,"score_gpt":0.25858572303584354,"score_spread":0.24929316521952322,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054548447","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008533743,0.99662507,0.0003130287,0.00066919194,0.0012589894,0.0000036086496,0.000011611231,0.0000085777665,0.0010246304],"genre_scores_gemma":[0.00066290656,0.9966732,0.00026872574,0.0002941818,0.0012304764,0.000005382791,0.000025658808,0.0000018554201,0.00083761365],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99979013,0.000031680476,0.000030490997,0.000043210413,0.000078739635,0.000025739666],"domain_scores_gemma":[0.9994848,0.00020420834,0.00006978458,0.000025260493,0.00013260935,0.00008330921],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010862403,0.0013551932,0.0018605554,0.0016486588,0.00045314446,0.0015311154,0.0021796199,0.002379564,0.0027959077],"category_scores_gemma":[0.0007620691,0.00041263623,0.00041546032,0.0021855005,0.0016058779,0.0030842419,0.0015228718,0.0029750795,0.003685114],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018128625,0.000053756517,0.00014512765,0.008120372,0.000068291585,0.00037054962,0.0000560101,0.00043624392,0.0045309705,0.006330817,0.061551042,0.91815543],"study_design_scores_gemma":[0.000020204707,0.00004164575,0.0003392036,0.0010143635,0.000038048755,0.00089009135,0.00004742063,0.00007577203,0.000491455,0.0039833435,0.99304366,0.000014705295],"about_ca_topic_score_codex":0.000642688,"about_ca_topic_score_gemma":0.0012158296,"teacher_disagreement_score":0.0027959077,"about_ca_system_score_codex":0.0010956482,"about_ca_system_score_gemma":0.00094265013,"threshold_uncertainty_score":0.00935322},"labels":[],"label_agreement":null},{"id":"W2054575463","doi":"10.1128/jvi.02526-07","title":"Phosphorylation of IRF-3 on Ser 339 Generates a Hyperactive Form of IRF-3 through Regulation of Dimerization and CBP Association","year":2008,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Transactivation; Serine; Phosphorylation; Biology; Kinase; Molecular biology; Complementation; Protein-fragment complementation assay; Mutant; Cell biology; Gene; Transcription factor; Biochemistry","score_opus":0.0130740218964315,"score_gpt":0.23708616498728097,"score_spread":0.22401214309084946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054575463","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99618536,0.00023786009,0.0025929636,0.000063154024,0.000013249309,0.000011837028,0.00017723847,0.000051661642,0.0006666766],"genre_scores_gemma":[0.99750817,0.00013679576,0.0014702955,0.000025177596,0.000004313504,0.000008526406,0.00024996212,0.000012124629,0.00058458745],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986315,0.000022939828,0.0000127277945,0.000029002644,0.000037778125,0.000034332483],"domain_scores_gemma":[0.99991965,0.000010559435,0.00003230509,0.000013470273,0.000006464908,0.00001758132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020260584,0.0004059509,0.00020365366,0.00019102087,0.00021289282,0.00020006669,0.00023491912,0.00022683239,0.0018690928],"category_scores_gemma":[0.00009247464,0.00016215199,0.0004152073,0.00012994555,0.00026015914,0.00016648554,0.00023383554,0.0005538912,0.00070434524],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000061475606,0.000009675277,0.00012103864,0.000009437261,0.0000022208253,0.00004155719,0.0000049389387,0.00003789444,0.9992849,0.00008232169,0.000010777115,0.00033373112],"study_design_scores_gemma":[0.000013416206,0.000062813575,0.0031990902,0.000002627897,0.0000062777253,0.00035125244,0.000016629185,0.00070014887,0.99472344,0.00011969714,0.0007996733,0.0000049949967],"about_ca_topic_score_codex":0.00025589345,"about_ca_topic_score_gemma":0.0002910813,"teacher_disagreement_score":0.0018690928,"about_ca_system_score_codex":0.00035903754,"about_ca_system_score_gemma":0.00018054646,"threshold_uncertainty_score":0.006252706},"labels":[],"label_agreement":null},{"id":"W2055389755","doi":"10.1182/blood-2014-05-577825","title":"Mutually exclusive recurrent somatic mutations in MAP2K1 and BRAF support a central role for ERK activation in LCH pathogenesis","year":2014,"lang":"en","type":"article","venue":"Blood","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":426,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pediatric Oncology Group","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Cancer Institute; National Institutes of Health; Dan L. Duncan Cancer Center, Baylor College of Medicine; Lester and Sue Smith Foundation; National Human Genome Research Institute; Texas Children's Hospital; Deutsche Forschungsgemeinschaft; Howard Hughes Medical Institute","keywords":"MAPK/ERK pathway; Somatic cell; Kinase; Mutation; Mutant; Cancer research; Phosphorylation; Biology; Protein kinase A; Cell biology; Genetics; Gene","score_opus":0.008187265647701976,"score_gpt":0.2352227689866391,"score_spread":0.22703550333893713,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055389755","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99677604,0.00087231555,0.0006425666,0.00003503353,0.0000035639787,0.00000654008,0.00006992744,0.000015631653,0.0015783819],"genre_scores_gemma":[0.99947363,0.00013714991,0.00018161857,0.0000065294853,0.0000045785614,0.000002277514,0.000057248155,0.0000014388643,0.00013556317],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99991024,0.000016637694,0.000009532236,0.000020060546,0.000024062007,0.000019470068],"domain_scores_gemma":[0.9998729,0.00003198438,0.000042145683,0.000015663672,0.000021145908,0.000016111799],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019675343,0.00019732627,0.00014764264,0.00040214046,0.00013905556,0.00020663673,0.00012955199,0.00020712949,0.0013346163],"category_scores_gemma":[0.00030590518,0.00006924131,0.00009513926,0.00014240632,0.0002198452,0.00016169684,0.00017991234,0.00017575765,0.00026824337],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017141916,0.000113485694,0.21165794,0.00017008265,0.000097326956,0.006243711,0.00020968723,0.0003501087,0.7434275,0.0011577649,0.00029153374,0.0345667],"study_design_scores_gemma":[0.00010424959,0.00045634774,0.6668833,0.00003471815,0.00015596276,0.04115084,0.00029446356,0.0038380905,0.28104284,0.0016707726,0.0043505137,0.000017965665],"about_ca_topic_score_codex":0.00018340242,"about_ca_topic_score_gemma":0.00019528942,"teacher_disagreement_score":0.0013346163,"about_ca_system_score_codex":0.00016453415,"about_ca_system_score_gemma":0.000096038835,"threshold_uncertainty_score":0.004464686},"labels":[],"label_agreement":null},{"id":"W2056414995","doi":"10.1016/j.vetimm.2013.07.007","title":"Early inflammatory response to the saponin adjuvant Matrix-M in the pig","year":2013,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Vetenskapsrådet; Sixth Framework Programme; Svenska Forskningsrådet Formas","keywords":"Lymph node; Lymph; Biology; Infiltration (HVAC); Tumor necrosis factor alpha; Pathology; Adjuvant; Cytokine; Immunology; Molecular biology; Medicine","score_opus":0.011377749749884664,"score_gpt":0.2503639047565852,"score_spread":0.23898615500670053,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056414995","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99706894,0.001052366,0.00044140118,0.00010393049,0.0000505526,0.000029362673,0.00010212043,0.000016448786,0.0011349295],"genre_scores_gemma":[0.99679357,0.0005736188,0.00037710654,0.00017849232,0.00004520591,0.000034036082,0.00019282458,0.000005258784,0.0017999522],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998647,0.000029785959,0.0000074170903,0.000029409728,0.000020049878,0.000048623013],"domain_scores_gemma":[0.99984777,0.00004072661,0.00003347489,0.000018408671,0.00001402896,0.000045497767],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033268644,0.00030449833,0.00036712832,0.0003132059,0.00016905252,0.000329089,0.000152247,0.00076444715,0.0011200359],"category_scores_gemma":[0.0002471848,0.00024160037,0.00033872118,0.00011199313,0.00040117002,0.00028641793,0.00015836522,0.001014125,0.00033451512],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0053535267,0.000419097,0.005333668,0.00015676407,0.000014499199,0.0009958124,0.0001558237,0.0001730365,0.9799248,0.00026395966,0.00020030154,0.0070087644],"study_design_scores_gemma":[0.0007539725,0.02552104,0.4858188,0.00019302109,0.00023653598,0.0029487591,0.0014480089,0.0031513555,0.47209215,0.0016012674,0.0061753285,0.00005973177],"about_ca_topic_score_codex":0.00056488573,"about_ca_topic_score_gemma":0.0006855583,"teacher_disagreement_score":0.0011200359,"about_ca_system_score_codex":0.00041569798,"about_ca_system_score_gemma":0.00028529836,"threshold_uncertainty_score":0.0037468672},"labels":[],"label_agreement":null},{"id":"W2056750070","doi":"10.1002/biof.19","title":"Type III IFNs: New layers of complexity in innate antiviral immunity","year":2009,"lang":"en","type":"review","venue":"BioFactors","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":98,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Tellabs (Canada)","funders":"","keywords":"Innate immune system; Immunity; Virology; Biology; Immunology; Immune system","score_opus":0.11997692926168081,"score_gpt":0.35419584493831313,"score_spread":0.23421891567663233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056750070","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021236295,0.99786013,0.00043475573,0.00030396273,0.00024428562,0.0000023826747,0.0000071697523,0.000008034996,0.00092689256],"genre_scores_gemma":[0.0009272793,0.9970824,0.0005971811,0.00018462125,0.00038276965,0.0000043917494,0.000018124514,0.0000014681927,0.00080173375],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998661,0.000020784542,0.00001885833,0.000023677232,0.00005696407,0.00001356642],"domain_scores_gemma":[0.9998362,0.0000646076,0.0000255466,0.0000075019598,0.000040347164,0.000025708541],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045183496,0.00067397725,0.0010903099,0.0011520666,0.0002405534,0.00097455486,0.0006492244,0.0009750206,0.0017343641],"category_scores_gemma":[0.00031286178,0.00021390205,0.00024956424,0.0015563576,0.000541432,0.0019846843,0.000559815,0.0015922239,0.0019060449],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000061907806,0.00003919295,0.00019423717,0.0058442513,0.00003426316,0.0002559992,0.0000957584,0.00026304636,0.007940377,0.0061242115,0.013733566,0.96541315],"study_design_scores_gemma":[0.00000925606,0.000067036926,0.0007539157,0.001505027,0.000038057122,0.0016154568,0.000098930934,0.00010111421,0.0010675584,0.0057498864,0.98897564,0.000018174946],"about_ca_topic_score_codex":0.00028776706,"about_ca_topic_score_gemma":0.00049608917,"teacher_disagreement_score":0.0017343641,"about_ca_system_score_codex":0.0005101738,"about_ca_system_score_gemma":0.0006613885,"threshold_uncertainty_score":0.005802095},"labels":[],"label_agreement":null},{"id":"W2056911843","doi":"10.1074/jbc.m408452200","title":"A CRM1-dependent Nuclear Export Pathway Is Involved in the Regulation of IRF-5 Subcellular Localization","year":2004,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Terry Fox Research Institute","funders":"Canadian Institutes of Health Research; Cancer Research Society","keywords":"Nuclear localization sequence; Nuclear export signal; Nuclear transport; Phosphorylation; Cell biology; Biology; Subcellular localization; Interferon regulatory factors; Kinase; Interferon; Nuclear protein; Cell nucleus; Signal transduction; Transcription factor; Cytoplasm; Gene; Biochemistry; Virology","score_opus":0.02139000207618064,"score_gpt":0.22955869215904942,"score_spread":0.20816869008286878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056911843","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95534575,0.0123443585,0.024489777,0.00057871215,0.00013468754,0.00007924943,0.0011295915,0.0006453043,0.0052524875],"genre_scores_gemma":[0.98640686,0.0022371998,0.0066090957,0.00010973184,0.000027531634,0.000036474812,0.0010947413,0.000052163174,0.0034261928],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985456,0.00001906322,0.000011011743,0.000046756613,0.000031695086,0.00003690089],"domain_scores_gemma":[0.9998741,0.000014793782,0.000045261415,0.000013286124,0.000021253267,0.00003133331],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019903998,0.00045614998,0.00028464003,0.00018824507,0.00036923695,0.00031188855,0.0003658266,0.00029626116,0.0020523896],"category_scores_gemma":[0.0001440214,0.00013052949,0.00044348428,0.00010908118,0.0002674183,0.00044269738,0.0003128761,0.0005576722,0.00095776055],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020081215,0.000027183347,0.0006055934,0.00017184926,0.000009251279,0.00033439373,0.000023271825,0.00013003373,0.99430484,0.0004566649,0.00018859447,0.0035475378],"study_design_scores_gemma":[0.000057583897,0.00018828509,0.021944381,0.00003908338,0.00003490659,0.0019161702,0.00006605786,0.0038333272,0.9626996,0.0003799001,0.00881559,0.000025124677],"about_ca_topic_score_codex":0.00048784362,"about_ca_topic_score_gemma":0.0005388475,"teacher_disagreement_score":0.0020523896,"about_ca_system_score_codex":0.0005185545,"about_ca_system_score_gemma":0.00039037922,"threshold_uncertainty_score":0.0068659782},"labels":[],"label_agreement":null},{"id":"W2057384762","doi":"10.1128/jvi.01609-12","title":"Resistance to Two Heterologous Neurotropic Oncolytic Viruses, Semliki Forest Virus and Vaccinia Virus, in Experimental Glioma","year":2012,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario; Ottawa Regional Cancer Foundation","funders":"Canadian Institutes of Health Research","keywords":"Semliki Forest virus; Biology; Oncolytic virus; Vaccinia; Virology; Virus; Alphavirus; Heterologous; Poxviridae; Viral replication; Viral Interference; Recombinant DNA; Gene; RNA; Genetics","score_opus":0.017432436200459034,"score_gpt":0.2968710787728269,"score_spread":0.2794386425723679,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057384762","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99692756,0.0007380989,0.0015123959,0.000047908423,0.000033334145,0.00003257047,0.00014502661,0.000045089957,0.00051818823],"genre_scores_gemma":[0.99670607,0.00041668044,0.0013773411,0.00001959348,0.000017032255,0.000050405404,0.00029715986,0.00001657132,0.0010991587],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99965477,0.00008709868,0.000047202688,0.000073688534,0.00004497459,0.00009232174],"domain_scores_gemma":[0.99962604,0.00013394089,0.00007295015,0.00006973749,0.000027527149,0.00006976217],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035169165,0.00043809632,0.00041080057,0.00043420316,0.00017662873,0.0002749088,0.00025718956,0.00044583782,0.0008293655],"category_scores_gemma":[0.0002992709,0.00020144277,0.00035703904,0.000188136,0.00040499985,0.0002864264,0.00017523071,0.0010395626,0.00021438205],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021533792,0.000073350464,0.00019343878,0.000018592546,0.000004431051,0.000025213718,0.000017148377,0.000032814867,0.9987363,0.00009676307,0.00001578868,0.00057083165],"study_design_scores_gemma":[0.00001940933,0.0010359677,0.0013814933,0.0000024450237,0.000018390254,0.00017780159,0.000013112086,0.00036879416,0.9965591,0.000037711685,0.00038267547,0.0000031052768],"about_ca_topic_score_codex":0.0005412997,"about_ca_topic_score_gemma":0.00047581713,"teacher_disagreement_score":0.0008293655,"about_ca_system_score_codex":0.00032093743,"about_ca_system_score_gemma":0.00022817793,"threshold_uncertainty_score":0.0027745366},"labels":[],"label_agreement":null},{"id":"W2057695550","doi":"10.1016/j.cyto.2008.07.255","title":"193 IFN-mediated inactivation of the 4E-BP1 repressor of mRNA translation influences an antiviral response","year":2008,"lang":"en","type":"article","venue":"Cytokine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Toronto General Hospital; University of Toronto","funders":"","keywords":"Repressor; Translation (biology); Messenger RNA; Chemistry; Cell biology; Virology; Biology; Gene expression; Gene; Biochemistry","score_opus":0.028458784539476437,"score_gpt":0.2624169530736917,"score_spread":0.2339581685342153,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057695550","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9861886,0.0018976722,0.005793705,0.00043069682,0.00017949883,0.000019263705,0.00036419026,0.00019968498,0.004926627],"genre_scores_gemma":[0.99356765,0.00028403586,0.0020398186,0.00011428194,0.000035680085,0.000013504998,0.0003410033,0.00008538727,0.003518638],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997836,0.000032146276,0.000012104194,0.00004615337,0.000047260393,0.00007871036],"domain_scores_gemma":[0.9998398,0.00005731622,0.000025511024,0.00002959452,0.000016336633,0.00003144509],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022308962,0.00037200237,0.00033083296,0.0003185196,0.00039970168,0.0006734687,0.00027264573,0.0004176232,0.0043323534],"category_scores_gemma":[0.00023502485,0.00024197131,0.00029562012,0.00014284179,0.00064153987,0.0003055685,0.0003417701,0.0011278711,0.0015058159],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001390096,0.000016767608,0.00017530816,0.000009228048,0.0000017746987,0.000039535,0.0000066374837,0.00005445491,0.9982703,0.00040227233,0.000050813058,0.0008339025],"study_design_scores_gemma":[0.000009115725,0.000031812913,0.0014533872,0.0000026364237,0.0000031538818,0.00008480378,0.000015692658,0.00068531214,0.9963497,0.00015050457,0.0012105607,0.0000032398768],"about_ca_topic_score_codex":0.0006393742,"about_ca_topic_score_gemma":0.00066731544,"teacher_disagreement_score":0.0043323534,"about_ca_system_score_codex":0.00077773904,"about_ca_system_score_gemma":0.00028440758,"threshold_uncertainty_score":0.014493227},"labels":[],"label_agreement":null},{"id":"W2057940137","doi":"10.1038/cr.2010.113","title":"Tom70 imports antiviral immunity to the mitochondria","year":2010,"lang":"en","type":"article","venue":"Cell Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Terry Fox Research Institute; McGill University","funders":"","keywords":"Biology; Immunity; Mitochondrion; Virology; Immunology; Cell biology; Immune system","score_opus":0.03420561800303626,"score_gpt":0.3473621316484086,"score_spread":0.31315651364537234,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057940137","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9016991,0.017824015,0.019477783,0.013885977,0.0019197438,0.000043315507,0.00072912243,0.0010871489,0.043333765],"genre_scores_gemma":[0.98007274,0.0026736709,0.0025645376,0.00077442144,0.0003393903,0.000013262107,0.00046510465,0.00012699397,0.012969923],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997389,0.000043704596,0.000012387881,0.000038839065,0.00006840772,0.0000977932],"domain_scores_gemma":[0.99964976,0.000044638244,0.000042613574,0.000078403405,0.00008434141,0.00010016574],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003828576,0.0004531803,0.00048900896,0.00048614648,0.00063181826,0.0015362193,0.00024865955,0.00080501474,0.0034174966],"category_scores_gemma":[0.000453914,0.0002135334,0.0005100666,0.00021557028,0.0006956828,0.001251495,0.0009061265,0.0016238866,0.0016681023],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007003609,0.00004115631,0.0006898326,0.00014054058,0.000021540818,0.00030697085,0.00012485878,0.0001941475,0.9653274,0.016028661,0.0023952683,0.014029344],"study_design_scores_gemma":[0.00010774507,0.00035595451,0.0060442304,0.00008235112,0.000044902496,0.0011456902,0.00055341603,0.0017562835,0.8922353,0.013084269,0.084553555,0.000036322734],"about_ca_topic_score_codex":0.00037248657,"about_ca_topic_score_gemma":0.0005568009,"teacher_disagreement_score":0.0034174966,"about_ca_system_score_codex":0.0011070764,"about_ca_system_score_gemma":0.00043460872,"threshold_uncertainty_score":0.011432648},"labels":[],"label_agreement":null},{"id":"W2058083824","doi":"10.1016/j.bbagrm.2011.04.009","title":"The p150 subunit of the histone chaperone Caf-1 interacts with the transcriptional repressor Gfi1","year":2011,"lang":"en","type":"article","venue":"Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"Deutsche Forschungsgemeinschaft","keywords":"Chromatin; Biology; Histone; Repressor; Histone H2A; Histone-modifying enzymes; Histone methyltransferase; Promoter; Histone H1; Histone code; Chaperone (clinical); Cell biology; Psychological repression; Molecular biology; Protein subunit; Transcription (linguistics); Chromatin structure remodeling (RSC) complex; SAP30; Transcription factor; Chromatin remodeling; Gene expression; Genetics; DNA; Gene; Nucleosome","score_opus":0.01779914638366548,"score_gpt":0.2199327680066346,"score_spread":0.20213362162296913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2058083824","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9896544,0.004123113,0.0024266392,0.0003657681,0.00005837451,0.0000061646156,0.00009838349,0.00013030486,0.0031367664],"genre_scores_gemma":[0.99535227,0.0007840965,0.00082383404,0.000096350814,0.000035610727,0.0000061681603,0.00032008695,0.00003636431,0.0025451467],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998281,0.000015487474,0.000005870623,0.00004715094,0.00003856261,0.000064802196],"domain_scores_gemma":[0.9998369,0.000028655748,0.000047199766,0.0000168461,0.000015049165,0.000055366087],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020908077,0.00031224173,0.00033151245,0.00031026482,0.00044869547,0.00062193023,0.00042909782,0.0004189434,0.0018551296],"category_scores_gemma":[0.0005631153,0.0002752505,0.00031711187,0.00019493075,0.00034670197,0.00062060915,0.00067799015,0.000568445,0.0015051565],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026072943,0.000019613952,0.0023867537,0.000063956184,0.000017173355,0.00019592424,0.000042054162,0.00012574777,0.99104273,0.000658657,0.0004941532,0.0046925014],"study_design_scores_gemma":[0.000056289595,0.00015646577,0.048526626,0.000025678593,0.00003828519,0.0011076244,0.00013568594,0.0047613033,0.9335553,0.0009344177,0.010677184,0.000025094349],"about_ca_topic_score_codex":0.0007137267,"about_ca_topic_score_gemma":0.0009506104,"teacher_disagreement_score":0.0018551296,"about_ca_system_score_codex":0.00084944104,"about_ca_system_score_gemma":0.00022550211,"threshold_uncertainty_score":0.0062060356},"labels":[],"label_agreement":null},{"id":"W2060364901","doi":"10.1002/ijc.23379","title":"The hTAF<sub>II</sub>68‐TEC fusion protein functions as a strong transcriptional activator","year":2008,"lang":"en","type":"article","venue":"International Journal of Cancer","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Directorate for Education and Human Resources; Ministry of Education and Human Resources Development; Rural Development Administration; Université Laval","keywords":"TEC; Transactivation; Fusion protein; Biology; Fusion gene; Transcription factor; Molecular biology; Chemistry; Cancer research; Gene; Genetics; Recombinant DNA; Physics","score_opus":0.014586887460970735,"score_gpt":0.2729777602044854,"score_spread":0.25839087274351463,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060364901","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99622923,0.0006385172,0.0015670073,0.00005066721,0.000009575969,0.000008999806,0.00016385081,0.00004217398,0.0012899595],"genre_scores_gemma":[0.9962185,0.00020626222,0.0012490039,0.000020099698,0.0000062748813,0.000007966528,0.00043880407,0.000007780566,0.0018453054],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99995196,0.0000051269762,0.0000027900392,0.000010913303,0.000013850046,0.000015444642],"domain_scores_gemma":[0.9999516,0.000009646396,0.000010974596,0.000005647498,0.000004669615,0.0000174411],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000055823297,0.00019819252,0.00009029322,0.00010812955,0.00011322132,0.00015000094,0.000090416775,0.00013461678,0.00087412074],"category_scores_gemma":[0.000057790472,0.00006729421,0.00013964274,0.00009254178,0.00018288483,0.00008954697,0.00013921862,0.00023496551,0.0004184946],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018910541,0.000004286107,0.00019840553,0.000006684065,0.0000011172142,0.000038021706,0.000004411746,0.000023908722,0.99910647,0.00006154646,0.000023103994,0.00051312515],"study_design_scores_gemma":[0.000019097677,0.00016104379,0.01005388,0.0000042928546,0.000011219966,0.0010842994,0.000024643905,0.0012482256,0.9818731,0.00007086289,0.005445109,0.0000042590536],"about_ca_topic_score_codex":0.0005480941,"about_ca_topic_score_gemma":0.0007195776,"teacher_disagreement_score":0.00087412074,"about_ca_system_score_codex":0.00021686307,"about_ca_system_score_gemma":0.00010281034,"threshold_uncertainty_score":0.0029242635},"labels":[],"label_agreement":null},{"id":"W2060818486","doi":"10.1074/jbc.m111.305268","title":"Cell-Cell Membrane Fusion Induced by p15 Fusion-associated Small Transmembrane (FAST) Protein Requires a Novel Fusion Peptide Motif Containing a Myristoylated Polyproline Type II Helix","year":2011,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Marine Biosciences; Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Polyproline helix; Ectodomain; Transmembrane domain; Lipid bilayer fusion; Peptide; Myristoylation; Chemistry; Biophysics; Chinese hamster ovary cell; Transmembrane protein; Peptide sequence; Liposome; Cell membrane; Lipid bilayer; Amino acid; Protein structure; Biochemistry; Membrane; Biology; Receptor","score_opus":0.03349639384070259,"score_gpt":0.23066186946773795,"score_spread":0.19716547562703535,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060818486","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99667895,0.0002549865,0.0025408885,0.000020276371,0.000006013706,0.00002012802,0.00007042844,0.000023819808,0.0003844458],"genre_scores_gemma":[0.9971481,0.00015051861,0.0021292532,0.000017929886,0.0000033260235,0.000017335402,0.00016268456,0.0000066350767,0.00036417323],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984443,0.000036619254,0.000019563486,0.000027428985,0.000037361806,0.000034597677],"domain_scores_gemma":[0.9998659,0.000046443696,0.000037698115,0.0000124502185,0.000012576978,0.000024877376],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022900024,0.00027255944,0.00018033381,0.00010487588,0.00011343929,0.0002460362,0.00012968176,0.00024497818,0.00037879025],"category_scores_gemma":[0.00022039485,0.000111836154,0.00027300182,0.000103307706,0.00020710776,0.0002598991,0.00025388878,0.0003133391,0.0001620962],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042538817,0.000006101682,0.000072673356,0.0000110103465,0.0000016665234,0.00003192099,0.0000063356515,0.000045801866,0.9994266,0.00009206094,0.0000048623797,0.00025847464],"study_design_scores_gemma":[0.000009445404,0.00017886754,0.001515669,0.000002630775,0.0000044208878,0.00017674507,0.000009273754,0.0008907028,0.9967669,0.000040331666,0.00040255775,0.000002566603],"about_ca_topic_score_codex":0.00024274172,"about_ca_topic_score_gemma":0.00027314658,"teacher_disagreement_score":0.00037879025,"about_ca_system_score_codex":0.00034203494,"about_ca_system_score_gemma":0.00017703018,"threshold_uncertainty_score":0.002481699},"labels":[],"label_agreement":null},{"id":"W2062059238","doi":"10.1016/s0168-9525(03)00172-0","title":"Maneuvering for advantage: the genetics of mouse susceptibility to virus infection","year":2003,"lang":"en","type":"article","venue":"Trends in Genetics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Ottawa Regional Cancer Foundation; University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Host (biology); Organism; Genetics; Host response; Function (biology); Model organism; Virus; Innate immune system; Virology; Evolutionary biology; Gene; Immune system","score_opus":0.027256432814671303,"score_gpt":0.31323149895553937,"score_spread":0.28597506614086804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062059238","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9863305,0.0019760837,0.0068272944,0.0008552221,0.00008495063,0.000028939518,0.00029620444,0.00047178034,0.003129165],"genre_scores_gemma":[0.990606,0.0012747968,0.0033406734,0.00023467068,0.000031922315,0.000038471415,0.00012436054,0.00023884907,0.004110298],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994343,0.00015273305,0.000039947656,0.000096550095,0.00016675967,0.000109632034],"domain_scores_gemma":[0.9993692,0.00018209853,0.0001844935,0.00007052439,0.000029215424,0.00016447561],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046215532,0.00089540106,0.00034848397,0.0016238536,0.0003513793,0.000848645,0.00070016243,0.0013703293,0.0023245588],"category_scores_gemma":[0.0005794999,0.00042975665,0.00047940188,0.00041179883,0.000986651,0.0004792728,0.0006852761,0.0022369067,0.0004253083],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018884262,0.00003421121,0.000547247,0.00001811124,0.000011603989,0.00014782153,0.00003854872,0.00025803308,0.994262,0.0018704918,0.0001313848,0.0024917757],"study_design_scores_gemma":[0.00018538341,0.00047389473,0.017059844,0.00006779345,0.00014498578,0.0025305185,0.00024596977,0.0068596187,0.9598013,0.0046701645,0.00787433,0.00008620998],"about_ca_topic_score_codex":0.0009757534,"about_ca_topic_score_gemma":0.0015628753,"teacher_disagreement_score":0.0023245588,"about_ca_system_score_codex":0.00064468634,"about_ca_system_score_gemma":0.00033257448,"threshold_uncertainty_score":0.0077763796},"labels":[],"label_agreement":null},{"id":"W2062368346","doi":"10.1038/sj.onc.1209941","title":"Manipulation of the nuclear factor-κB pathway and the innate immune response by viruses","year":2006,"lang":"en","type":"review","venue":"Oncogene","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":245,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Terry Fox Research Institute; McGill University","funders":"National Cancer Institute; Canadian Institutes of Health Research; Cancer Research Society; McGill University","keywords":"Biology; Innate immune system; Transcription factor; IκB kinase; Cell biology; Signal transduction; Pattern recognition receptor; Interferon regulatory factors; Immune system; NF-κB; RNA interference; Interferon; Virology; Immunology; RNA; Genetics; Gene","score_opus":0.03229440228663162,"score_gpt":0.2851768509472572,"score_spread":0.2528824486606256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062368346","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002972836,0.9968901,0.00055276684,0.00025152296,0.00047044276,0.0000041577346,0.000013988796,0.00001304235,0.0015066937],"genre_scores_gemma":[0.0013365047,0.9963069,0.00041856486,0.00015684242,0.00031907944,0.000006651353,0.0000318171,0.0000025660472,0.0014211443],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998648,0.00001432649,0.000016655513,0.00002773221,0.000060840186,0.000015653033],"domain_scores_gemma":[0.9998228,0.00006881012,0.00003166556,0.000009295392,0.000041022697,0.000026451966],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045201072,0.001113708,0.0013632767,0.0010700241,0.00028768642,0.0010323756,0.0012625987,0.0011598173,0.001937196],"category_scores_gemma":[0.00033438188,0.00031794075,0.00031386712,0.0012864603,0.00087702984,0.0014575036,0.0005102528,0.002092208,0.002341413],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002236073,0.000109642904,0.00015144305,0.008534422,0.00006197081,0.0005064856,0.00006894059,0.0006374868,0.02927469,0.007664988,0.028684024,0.9240823],"study_design_scores_gemma":[0.000028541299,0.00006121649,0.0004663916,0.00073593186,0.00004160968,0.0014638699,0.00004810531,0.00012596148,0.0049378267,0.002744916,0.9893273,0.00001831494],"about_ca_topic_score_codex":0.00071143,"about_ca_topic_score_gemma":0.0012984211,"teacher_disagreement_score":0.001937196,"about_ca_system_score_codex":0.00081826455,"about_ca_system_score_gemma":0.00065356103,"threshold_uncertainty_score":0.006480634},"labels":[],"label_agreement":null},{"id":"W2063675796","doi":"10.1002/ajmg.a.36887","title":"Characterization of human disease phenotypes associated with mutations in <i>TREX1</i>, <i>RNASEH2A</i>, <i>RNASEH2B</i>, <i>RNASEH2C</i>, <i>SAMHD1</i>, <i>ADAR</i>, and <i>IFIH1</i>","year":2015,"lang":"en","type":"article","venue":"American Journal of Medical Genetics Part A","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":613,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster Children's Hospital; Mount Sinai Hospital; McGill University; BC Children's Hospital; Montreal Neurological Institute and Hospital; University of Toronto; SickKids Foundation; Hospital for Sick Children; Montreal Children's Hospital","funders":"National Center for Research Resources; Agence Nationale de la Recherche; European Commission","keywords":"Medicine; Encephalopathy; Compound heterozygosity; Pathology; Internal medicine; Immunology; Phenotype; Gastroenterology; Gene; Biology; Genetics","score_opus":0.015750818030526536,"score_gpt":0.26349222723233384,"score_spread":0.24774140920180732,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2063675796","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990965,0.00020547608,0.00014022531,0.0000069126454,0.0000013545194,0.0000044262156,0.00020254664,0.0000026240268,0.0003400499],"genre_scores_gemma":[0.9985739,0.00027381635,0.00021897013,0.00000985946,0.0000029490275,0.000006701048,0.0006967074,0.0000030036665,0.00021406035],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99991727,0.000019121406,0.000010176059,0.000022751192,0.000014688363,0.000016112193],"domain_scores_gemma":[0.99983895,0.00005220086,0.000057145015,0.000020322528,0.000010082741,0.000021286456],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009492531,0.00018711429,0.00018190917,0.00035363456,0.00020835557,0.00014821689,0.00011582509,0.00012819044,0.0011131512],"category_scores_gemma":[0.0003885931,0.000085789245,0.00013525304,0.00028621592,0.0002565968,0.00007519305,0.00017716512,0.00012630428,0.00023367819],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012567481,0.00013071384,0.8373238,0.00012313038,0.00008923248,0.018546524,0.0010233624,0.0004425534,0.12044939,0.00037225208,0.00072802976,0.019514346],"study_design_scores_gemma":[0.00004539594,0.0005230014,0.9161947,0.00001810875,0.00005500552,0.06808025,0.00034298038,0.00037397258,0.010251141,0.00020506434,0.0038911612,0.000019315641],"about_ca_topic_score_codex":0.0011228026,"about_ca_topic_score_gemma":0.0011052102,"teacher_disagreement_score":0.0011228026,"about_ca_system_score_codex":0.00012142535,"about_ca_system_score_gemma":0.00010659961,"threshold_uncertainty_score":0.0037238598},"labels":[],"label_agreement":null},{"id":"W2065078219","doi":"10.1159/000360764","title":"Sustained Activation of Interferon Regulatory Factor 3 during Infection by Paramyxoviruses Requires MDA5","year":2014,"lang":"en","type":"article","venue":"Journal of Innate Immunity","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"MDA5; RIG-I; Gene knockdown; Interferon regulatory factors; Biology; Interferon; Innate immune system; Cell biology; Sendai virus; Transcription factor; Virology; Virus; Gene; RNA; RNA interference; Immunology; Immune system; Genetics","score_opus":0.012410652527572048,"score_gpt":0.2550012655083131,"score_spread":0.24259061298074105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065078219","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9910177,0.0026065798,0.004882881,0.00007512314,0.000028620592,0.000024209246,0.00033860793,0.000069711095,0.00095654285],"genre_scores_gemma":[0.9968869,0.0004872569,0.0013376087,0.000039713355,0.0000054949114,0.000023245217,0.00038287786,0.000008645401,0.0008282194],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997917,0.000026165351,0.000021114245,0.00004099428,0.00004278113,0.00007728406],"domain_scores_gemma":[0.99991715,0.000012130669,0.000023969551,0.000014130455,0.000012658488,0.000019975389],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021376013,0.00028269418,0.00020130874,0.00016276604,0.00017794286,0.00038491172,0.00016691613,0.00023653013,0.0006931181],"category_scores_gemma":[0.0001389172,0.0001377145,0.00044011156,0.00008259319,0.00015781802,0.0003773887,0.00031939082,0.0005690644,0.00036794893],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059005484,0.0000074225363,0.0002758771,0.000017085295,0.0000024689211,0.00003084561,0.0000146910725,0.000028480936,0.99899024,0.00008019918,0.00001529118,0.00047839907],"study_design_scores_gemma":[0.000008268419,0.000156077,0.016048105,0.000010327573,0.000016141697,0.00017521772,0.00007645218,0.0010599884,0.98060834,0.00008681428,0.0017471856,0.0000070645206],"about_ca_topic_score_codex":0.00077570067,"about_ca_topic_score_gemma":0.00097117445,"teacher_disagreement_score":0.00077570067,"about_ca_system_score_codex":0.00048321832,"about_ca_system_score_gemma":0.00021387124,"threshold_uncertainty_score":0.0035060048},"labels":[],"label_agreement":null},{"id":"W2065327004","doi":"10.1016/j.gene.2014.06.066","title":"Molecular cloning, expression and characterization of Pekin duck interferon-λ","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; Canadian Liver Foundation","keywords":"Biology; Interferon; Gene; Cloning (programming); Recombinant DNA; Exon; Innate immune system; Genome; Genetics; Virology; Intron; Receptor; Molecular biology","score_opus":0.005500577209299422,"score_gpt":0.21182245672374486,"score_spread":0.20632187951444544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065327004","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97224885,0.0008295058,0.022289515,0.00021849033,0.00007123856,0.00009454827,0.0021679902,0.0001220277,0.0019577718],"genre_scores_gemma":[0.9402429,0.00091719587,0.027991183,0.000116496994,0.000030875166,0.0000999561,0.00961942,0.000099011726,0.020883081],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999155,0.000009736632,0.000009215513,0.000024094878,0.000017974435,0.000023498547],"domain_scores_gemma":[0.9998307,0.00005183324,0.000029601477,0.000028336339,0.000024844921,0.000034700566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001422881,0.0002961287,0.0002536531,0.00022094695,0.00028888643,0.00039510842,0.0003298699,0.00025606525,0.0011623058],"category_scores_gemma":[0.00017843099,0.0001820478,0.0003594658,0.00023617252,0.00025025784,0.00032498318,0.00018743302,0.0008859628,0.0010687348],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008559026,0.000019645906,0.00014427477,0.000023790371,0.0000025667418,0.000056859946,0.000027946837,0.00008586807,0.9982736,0.00023943634,0.00002697852,0.0010133768],"study_design_scores_gemma":[0.000010690666,0.00007275763,0.002440939,0.000005210841,0.000009512766,0.00022831117,0.000045548324,0.00057579024,0.99107355,0.00009019196,0.005442216,0.0000053168947],"about_ca_topic_score_codex":0.0014111365,"about_ca_topic_score_gemma":0.0010457893,"teacher_disagreement_score":0.0014111365,"about_ca_system_score_codex":0.00067318085,"about_ca_system_score_gemma":0.00039766208,"threshold_uncertainty_score":0.004884243},"labels":[],"label_agreement":null},{"id":"W2065459776","doi":"10.1016/j.jneuroim.2007.01.013","title":"8th International Congress of Neuroimmunology","year":2007,"lang":"en","type":"article","venue":"Journal of Neuroimmunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"","keywords":"Neuroimmunology; Library science; Political science; Neuroscience; Psychology; Computer science","score_opus":0.013453524312207815,"score_gpt":0.27515731723031456,"score_spread":0.26170379291810675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065459776","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.014850629,0.2571323,0.006698092,0.03696335,0.33733338,0.00020389656,0.0010892693,0.00073206035,0.34499702],"genre_scores_gemma":[0.046380743,0.082932614,0.0061387336,0.0058732354,0.06580939,0.00030603906,0.0012062141,0.0002855137,0.7910674],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99947125,0.00008805005,0.00004890023,0.00010765148,0.0001326665,0.00015157783],"domain_scores_gemma":[0.99958414,0.00003015264,0.000036249447,0.000040854025,0.000120235934,0.00018842418],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009812625,0.0013230521,0.00092111895,0.0015654899,0.0013309384,0.002541163,0.0011412976,0.0028113052,0.071288265],"category_scores_gemma":[0.0005719221,0.000247561,0.0011100052,0.00068193104,0.00077686424,0.0014515091,0.0022251923,0.002690313,0.03187748],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006271328,0.00021643686,0.0015650751,0.0010314302,0.00009735494,0.0011070613,0.00022163376,0.0003430129,0.007849698,0.016826347,0.5796816,0.3904332],"study_design_scores_gemma":[0.000011199165,0.000056276298,0.0009055364,0.00011652994,0.000016158312,0.000535901,0.00003459334,0.000054058746,0.0005240138,0.0016205386,0.99611783,0.0000073892957],"about_ca_topic_score_codex":0.0005467667,"about_ca_topic_score_gemma":0.0015957238,"teacher_disagreement_score":0.071288265,"about_ca_system_score_codex":0.0011019858,"about_ca_system_score_gemma":0.0016207288,"threshold_uncertainty_score":0.23848295},"labels":[],"label_agreement":null},{"id":"W2065708720","doi":"10.1016/s0264-410x(01)00087-1","title":"Granzyme B: a marker of risk for influenza in institutionalized older adults","year":2001,"lang":"en","type":"article","venue":"Vaccine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute on Aging; Medical Research Council Canada; Howard Hughes Medical Institute","keywords":"Granzyme B; Granzyme; Immunology; Peripheral blood mononuclear cell; Granzyme A; Cytokine; Medicine; Immune system; Prospective cohort study; Virus; Biology; Virology; CD8; Internal medicine; In vitro; Perforin","score_opus":0.010138526938162175,"score_gpt":0.26156253216659614,"score_spread":0.25142400522843394,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065708720","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9994019,0.000217694,0.000055419427,0.000037677677,0.000006740974,0.000003224361,0.000066427056,0.0000022248885,0.00020861665],"genre_scores_gemma":[0.99956816,0.00009899154,0.00008370513,0.00002669777,0.000016617178,0.00000386943,0.00007785043,7.6946975e-7,0.00012335816],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998807,0.00003070357,0.000019198234,0.000020769468,0.000021344304,0.000027311133],"domain_scores_gemma":[0.99923205,0.0001127469,0.00038003505,0.000036148387,0.00008439434,0.00015469972],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026857192,0.00028603125,0.00033714095,0.00041633451,0.0003557371,0.00052915857,0.00019188818,0.00057923066,0.00072718365],"category_scores_gemma":[0.0018611886,0.00016209495,0.0002368655,0.00040778573,0.00016293561,0.00034113385,0.00028235343,0.00055381336,0.00012990306],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004184114,0.000044836128,0.9969536,0.0000074766367,0.000025708847,0.000103326034,0.000048421978,0.000021187188,0.00074381795,0.000007951449,0.000065716806,0.0015594758],"study_design_scores_gemma":[0.000009227301,0.00036532278,0.99827147,0.0000057565826,0.000042505297,0.0005375918,0.00017331519,0.0002215685,0.00023118779,0.000029220233,0.00010972903,0.0000031770105],"about_ca_topic_score_codex":0.0016923115,"about_ca_topic_score_gemma":0.0014594092,"teacher_disagreement_score":0.0016923115,"about_ca_system_score_codex":0.00017605552,"about_ca_system_score_gemma":0.00019119581,"threshold_uncertainty_score":0.003364861},"labels":[],"label_agreement":null},{"id":"W2067853414","doi":"10.1038/sj.onc.1203720","title":"LUCA-15-encoded sequence variants regulate CD95-mediated apoptosis","year":2000,"lang":"en","type":"article","venue":"Oncogene","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval","funders":"National Institutes of Health; National Center for Research Resources; Wellcome Trust; National Institute of Diabetes and Digestive and Kidney Diseases; University of Washington","keywords":"Biology; Jurkat cells; Fas receptor; Gene; Complementary DNA; Molecular biology; Genetics; Transfection; Locus (genetics); Untranslated region; Apoptosis; Alternative splicing; Programmed cell death; Messenger RNA; T cell","score_opus":0.01845552611225036,"score_gpt":0.2532524716132678,"score_spread":0.23479694550101743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067853414","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99663013,0.0008598319,0.0011710576,0.000057524172,0.000030870473,0.000011418765,0.00026867262,0.000049339535,0.0009211349],"genre_scores_gemma":[0.9976368,0.00017945372,0.00080569135,0.00003785764,0.0000054119673,0.000008758007,0.00042463446,0.000018914914,0.0008824055],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997284,0.00004769898,0.00002733793,0.000039885013,0.0000486034,0.00010807278],"domain_scores_gemma":[0.999783,0.000048478705,0.00005933807,0.000039957893,0.000018706005,0.000050545048],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020293045,0.0003091316,0.00019636081,0.00026046566,0.00026876302,0.0006396765,0.00031975275,0.00034577382,0.0016351864],"category_scores_gemma":[0.00025138396,0.00014291264,0.00029307173,0.00019250078,0.00042396455,0.00031576998,0.00028152176,0.00091985683,0.0006676659],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028305422,0.00003391189,0.00028737134,0.00001305272,0.000009321129,0.00005751484,0.000013429966,0.000100562735,0.9980282,0.00037225964,0.00004818638,0.00075322064],"study_design_scores_gemma":[0.000029184956,0.00020097232,0.0023230682,0.0000059869108,0.000017395849,0.00039494,0.00004532073,0.0010219316,0.9937418,0.00016681066,0.0020447029,0.000007919448],"about_ca_topic_score_codex":0.00093287864,"about_ca_topic_score_gemma":0.0013857986,"teacher_disagreement_score":0.0016351864,"about_ca_system_score_codex":0.00083479396,"about_ca_system_score_gemma":0.0002819631,"threshold_uncertainty_score":0.006056845},"labels":[],"label_agreement":null},{"id":"W2068366465","doi":"10.1097/qad.0b013e3280ef6ae1","title":"Polymorphisms in IRF-1 associated with resistance to HIV-1 infection in highly exposed uninfected Kenyan sex workers","year":2007,"lang":"en","type":"article","venue":"AIDS","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Science Centre for Human and Animal Health; University of Manitoba","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; Genotyping; Genotype; Allele; Seroconversion; Microsatellite; Immunology; Genetics; Gene; Multicenter AIDS Cohort Study; Virus; Sida; Viral disease","score_opus":0.008773268431907733,"score_gpt":0.2290499360101331,"score_spread":0.22027666757822537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068366465","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99981683,0.00003988565,0.00003378369,0.000010897602,0.0000013434258,0.0000017963895,0.00003159286,7.8398404e-7,0.00006307624],"genre_scores_gemma":[0.99966586,0.000022451533,0.00007461126,0.000011104081,0.0000032446237,0.0000031699487,0.000045955836,0.0000011226805,0.00017247966],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998944,0.000027695976,0.000007881633,0.000030103634,0.00001667134,0.00002328266],"domain_scores_gemma":[0.9997552,0.000056681773,0.00010420364,0.000017106759,0.000018820272,0.000047973663],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021041228,0.0002883523,0.000120818535,0.000273114,0.0002947831,0.00018531778,0.00015151002,0.00032332764,0.0026795147],"category_scores_gemma":[0.0005993773,0.0001619011,0.00016231195,0.00015987092,0.00015054745,0.00007778331,0.00011660703,0.00022701327,0.00020259502],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005880657,0.000102160244,0.9823101,0.000015895446,0.000053908643,0.00034817276,0.0002322055,0.000048358663,0.01412988,0.000030711268,0.000086357,0.002054195],"study_design_scores_gemma":[0.0000211302,0.00025704,0.99795216,0.00000987995,0.00002854219,0.00075251644,0.0001204959,0.00013356787,0.0005300139,0.000024274088,0.00016704695,0.0000032760895],"about_ca_topic_score_codex":0.0013184274,"about_ca_topic_score_gemma":0.0013795306,"teacher_disagreement_score":0.0026795147,"about_ca_system_score_codex":0.00008963343,"about_ca_system_score_gemma":0.00009125203,"threshold_uncertainty_score":0.008963883},"labels":[],"label_agreement":null},{"id":"W2070362953","doi":"10.1016/j.chom.2012.06.009","title":"Linear Ubiquitination of NEMO Negatively Regulates the Interferon Antiviral Response through Disruption of the MAVS-TRAF3 Complex","year":2012,"lang":"en","type":"article","venue":"Cell Host & Microbe","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":118,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Vesicular stomatitis virus; Biology; Signal transducing adaptor protein; Ubiquitin; MDA5; Cell biology; Interferon; RIG-I; Signal transduction; Regulator; Proinflammatory cytokine; NFKB1; Interferon regulatory factors; Virology; Receptor; RNA; Innate immune system; Virus; Immunology; Genetics; RNA interference; Transcription factor; Inflammation","score_opus":0.021655279352629897,"score_gpt":0.2702929081391421,"score_spread":0.2486376287865122,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070362953","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99575657,0.00084189075,0.0016185874,0.00022105077,0.00004725525,0.000006956543,0.00017454648,0.000062482555,0.0012706601],"genre_scores_gemma":[0.99773824,0.00014892548,0.00043912494,0.00003906278,0.0000051939264,0.0000038255266,0.00014935117,0.000018914601,0.0014572779],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998416,0.000026741414,0.000016998476,0.000029079094,0.000033723492,0.00005181423],"domain_scores_gemma":[0.9998293,0.00002054828,0.00005481658,0.000029587323,0.000017073588,0.00004862899],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016790535,0.00033657203,0.00019002736,0.00015689795,0.00044180406,0.0006017189,0.0003563355,0.00037365488,0.0016470099],"category_scores_gemma":[0.00015341502,0.00017453685,0.0003251276,0.00011459303,0.00045319175,0.00035640242,0.0003691977,0.0007001848,0.0007633767],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023462484,0.000020233188,0.00029033038,0.00001776875,0.000007725887,0.00007782936,0.000009282106,0.000070100796,0.9983889,0.00029726242,0.00005371894,0.0005322922],"study_design_scores_gemma":[0.000020423604,0.00004038898,0.005212352,0.000003917919,0.0000125467295,0.00030668013,0.000050795745,0.0016501625,0.990542,0.00021840616,0.0019355656,0.0000067122396],"about_ca_topic_score_codex":0.0006569505,"about_ca_topic_score_gemma":0.0013675166,"teacher_disagreement_score":0.0016470099,"about_ca_system_score_codex":0.0008475318,"about_ca_system_score_gemma":0.0002732122,"threshold_uncertainty_score":0.006149292},"labels":[],"label_agreement":null},{"id":"W2070412403","doi":"10.1074/jbc.m113.533034","title":"The Nucleotide-binding Leucine-rich Repeat (NLR) Family Member NLRX1 Mediates Protection against Experimental Autoimmune Encephalomyelitis and Represses Macrophage/Microglia-induced Inflammation","year":2013,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"National Cancer Institute; Canadian Institutes of Health Research","keywords":"Microglia; Experimental autoimmune encephalomyelitis; Leucine-rich repeat; Inflammation; Macrophage; Immunology; Encephalomyelitis; Biology; Chemistry; Genetics; Gene; Multiple sclerosis","score_opus":0.021509369207346703,"score_gpt":0.2459691016716921,"score_spread":0.2244597324643454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070412403","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9862488,0.0076018446,0.0032832015,0.0005007908,0.00008330263,0.000027348402,0.00028508698,0.00019117814,0.0017784815],"genre_scores_gemma":[0.9885218,0.004412872,0.002178883,0.00017690212,0.00006327986,0.00004385534,0.00045967958,0.000027325927,0.0041153203],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998234,0.00003726764,0.000022896824,0.00003421972,0.00003967173,0.000042577143],"domain_scores_gemma":[0.9998722,0.000010304112,0.00004714785,0.000015525204,0.000015616783,0.000039182443],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024254643,0.00046787004,0.00040227408,0.00019741057,0.00016708397,0.00029805166,0.00017586544,0.00032664218,0.0010846892],"category_scores_gemma":[0.00010040839,0.000071832794,0.00032597457,0.00009402137,0.0003007806,0.00027793978,0.0001789754,0.0007952179,0.0003971493],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034983223,0.00005878335,0.00021650331,0.00012036959,0.000008974163,0.000052805637,0.000021224843,0.000034104876,0.9964678,0.000094625335,0.00008007056,0.0024948162],"study_design_scores_gemma":[0.00010480467,0.0022103516,0.014403589,0.0000446406,0.00006405334,0.00064231077,0.00010725373,0.00056563684,0.97557074,0.00022292476,0.006053687,0.000009985755],"about_ca_topic_score_codex":0.00013604607,"about_ca_topic_score_gemma":0.00024347602,"teacher_disagreement_score":0.0010846892,"about_ca_system_score_codex":0.00011555096,"about_ca_system_score_gemma":0.00019130777,"threshold_uncertainty_score":0.0036286116},"labels":[],"label_agreement":null},{"id":"W2070790046","doi":"10.1016/j.immuni.2011.08.002","title":"Taking the STING Out of Malaria","year":2011,"lang":"en","type":"letter","venue":"Immunity","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Malaria; Biology; Innate immune system; Sting; Immunology; Immunity; Immunopathology; Disease; Immune system; Medicine; Internal medicine","score_opus":0.05474527254725566,"score_gpt":0.2737478442190438,"score_spread":0.21900257167178813,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070790046","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00043223688,0.003517063,0.00008964841,0.9746097,0.01887997,0.0000071318264,0.000012089962,0.000015677762,0.002436488],"genre_scores_gemma":[0.008555658,0.0022074827,0.00020907809,0.90805584,0.07312096,0.000023914783,0.000011206421,0.000015644096,0.007800115],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99781895,0.0010539413,0.00015046094,0.00019157745,0.00040620117,0.00037888464],"domain_scores_gemma":[0.99694735,0.0018237814,0.0001937159,0.000119394645,0.00030880963,0.00060704193],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023353081,0.0010251411,0.0015613373,0.00046494373,0.0041074553,0.0030666413,0.0014818185,0.051271215,0.0047804057],"category_scores_gemma":[0.012780648,0.0007484155,0.0010470054,0.00029039223,0.003625461,0.0046050497,0.0018710508,0.049221866,0.0031221341],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012932857,0.00006075908,0.00061870855,0.00008747989,0.000025083016,0.0045240936,0.00020612696,0.00006156083,0.00026479873,0.004731977,0.97689134,0.012398677],"study_design_scores_gemma":[0.0002898996,0.00017021592,0.0018816298,0.0004962226,0.0000692995,0.006928328,0.0008675839,0.000846444,0.00044593913,0.027855234,0.9600515,0.000097726086],"about_ca_topic_score_codex":0.0029109642,"about_ca_topic_score_gemma":0.0066494383,"teacher_disagreement_score":0.051271215,"about_ca_system_score_codex":0.0034367628,"about_ca_system_score_gemma":0.0019199967,"threshold_uncertainty_score":0.024935544},"labels":[],"label_agreement":null},{"id":"W2071910000","doi":"10.1016/j.biocel.2011.06.006","title":"The ISG15/USP18 ubiquitin-like pathway (ISGylation system) in Hepatitis C Virus infection and resistance to interferon therapy","year":2011,"lang":"en","type":"review","venue":"The International Journal of Biochemistry & Cell Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":66,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research","keywords":"ISG15; Interferon; Innate immune system; Biology; Hepatitis C virus; Ubiquitin; Interferon-stimulated gene; Virology; Immune system; Virus; Gene; Immunology; Genetics","score_opus":0.02118121886303546,"score_gpt":0.27859135599965734,"score_spread":0.25741013713662186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2071910000","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003618378,0.9979018,0.00026426773,0.00029027287,0.00031384514,0.0000050715958,0.00001428784,0.0000075597263,0.00084094034],"genre_scores_gemma":[0.0022559846,0.995606,0.00036053124,0.00021867565,0.00042541226,0.0000094596835,0.00004705699,0.0000018456178,0.0010749948],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99988306,0.000019443858,0.000021532653,0.000018793766,0.00004257566,0.000014573934],"domain_scores_gemma":[0.99985135,0.00004983535,0.000031055195,0.000005733266,0.000040288374,0.000021627917],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055840885,0.0007324528,0.0011695174,0.0010167612,0.00020712079,0.00070839736,0.00072503235,0.0010973884,0.0018155437],"category_scores_gemma":[0.0003262569,0.00024204193,0.00036447815,0.00096171355,0.00050655555,0.0008211965,0.00053230894,0.0012602594,0.001658403],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019475131,0.000081012346,0.0002426888,0.0054779537,0.000070095695,0.00033551714,0.000026556754,0.00036358548,0.0044905613,0.0028251396,0.022354582,0.96353763],"study_design_scores_gemma":[0.000069855305,0.00018160675,0.0013703725,0.0012822383,0.00014300676,0.002582656,0.000041117386,0.00023041361,0.0024258636,0.002250499,0.9894019,0.000020509728],"about_ca_topic_score_codex":0.0004976423,"about_ca_topic_score_gemma":0.00090407283,"teacher_disagreement_score":0.0018155437,"about_ca_system_score_codex":0.0005690142,"about_ca_system_score_gemma":0.0005981389,"threshold_uncertainty_score":0.0060736537},"labels":[],"label_agreement":null},{"id":"W2072595228","doi":"10.1006/viro.2001.0815","title":"Analyzing the Mechanisms of Interferon-Induced Apoptosis Using CrmA and Hepatitis C Virus NS5A","year":2001,"lang":"en","type":"article","venue":"Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Protein kinase R; Biology; Interferon; Apoptosis; Virology; Innate immune system; FADD; NLRP1; Virus; Protein kinase A; RNA silencing; Programmed cell death; Caspase; Cell biology; Kinase; Immune system; RNA; Immunology; RNA interference; Gene; Mitogen-activated protein kinase kinase; Genetics","score_opus":0.02196324028591293,"score_gpt":0.2581665281062684,"score_spread":0.23620328782035546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072595228","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98379725,0.0066397157,0.0067188926,0.00026234737,0.0000710008,0.000059816735,0.00018772023,0.00005312788,0.0022102108],"genre_scores_gemma":[0.991959,0.0019745047,0.0034970103,0.00009014918,0.000025686755,0.00004507362,0.00035675368,0.000012502605,0.0020393932],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997172,0.00006821314,0.000016040916,0.00003269776,0.00007525454,0.00009065379],"domain_scores_gemma":[0.99974054,0.0001217512,0.00003932432,0.000034884895,0.000038231952,0.000025285108],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061980914,0.0003022968,0.00029937163,0.0003753738,0.000321088,0.0004510031,0.0004338448,0.00046755729,0.0011300762],"category_scores_gemma":[0.00033677684,0.00016408107,0.0004550167,0.00024148545,0.00046143518,0.00060932816,0.00018318606,0.001098188,0.00034038635],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00060747575,0.000057935227,0.00055126636,0.000074331794,0.00001392594,0.0000744843,0.000027540378,0.00022199862,0.99480903,0.0009075208,0.00004831381,0.002606285],"study_design_scores_gemma":[0.000046700472,0.0003691656,0.0036193915,0.0000093282715,0.000025294223,0.0002977838,0.000046476365,0.003224469,0.99015135,0.00029157443,0.0019116129,0.0000067261085],"about_ca_topic_score_codex":0.0008876616,"about_ca_topic_score_gemma":0.0008870359,"teacher_disagreement_score":0.0011300762,"about_ca_system_score_codex":0.0009929365,"about_ca_system_score_gemma":0.00030167119,"threshold_uncertainty_score":0.007204294},"labels":[],"label_agreement":null},{"id":"W2072916053","doi":"10.1074/jbc.m209851200","title":"Identification of the Minimal Phosphoacceptor Site Required for in Vivo Activation of Interferon Regulatory Factor 3 in Response to Virus and Double-stranded RNA","year":2003,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":219,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University; Terry Fox Research Institute","funders":"","keywords":"Identification (biology); In vivo; RNA; Interferon; Computational biology; Virology; Biology; Gene; Genetics","score_opus":0.02625978519170547,"score_gpt":0.2724935469228728,"score_spread":0.24623376173116734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072916053","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964468,0.00026021854,0.0023791709,0.000056750046,0.000015302177,0.000027279419,0.00033789835,0.000031184572,0.0004453617],"genre_scores_gemma":[0.9915651,0.00025061925,0.005324113,0.000041107003,0.000010259389,0.00003857571,0.0015716741,0.000048629492,0.0011499079],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981767,0.00003922345,0.000019671414,0.000030850562,0.00005196818,0.000040593695],"domain_scores_gemma":[0.99972004,0.00006015777,0.0000958829,0.00002950773,0.000018244958,0.00007615483],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024108242,0.00038728557,0.00026151523,0.00016089033,0.0001750692,0.00028926067,0.00027296616,0.00028887263,0.0015358456],"category_scores_gemma":[0.00023445638,0.00023959592,0.0003101066,0.00011221675,0.00031424468,0.00019175703,0.00023021965,0.0005135926,0.00073887483],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008913646,0.000019914902,0.000048345173,0.00000977637,0.0000011631696,0.000016346314,0.000004206569,0.000029398909,0.9995578,0.000046810717,0.000005901286,0.00017114748],"study_design_scores_gemma":[0.000020592393,0.00015228188,0.0024335654,0.000004746768,0.0000070576784,0.00019507711,0.000010780782,0.0006007669,0.99572206,0.000053691965,0.00079468085,0.0000047032213],"about_ca_topic_score_codex":0.00051429216,"about_ca_topic_score_gemma":0.0007176173,"teacher_disagreement_score":0.0015358456,"about_ca_system_score_codex":0.00047221256,"about_ca_system_score_gemma":0.00032800838,"threshold_uncertainty_score":0.005137861},"labels":[],"label_agreement":null},{"id":"W2073697780","doi":"10.1016/j.dci.2006.06.005","title":"Immune gene discovery by expressed sequence tag analysis of spleen in the duck (Anas platyrhynchos)","year":2006,"lang":"en","type":"article","venue":"Developmental & Comparative Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Alberta Heritage Foundation for Medical Research","keywords":"Biology; Gene; Expressed sequence tag; Genetics; Immune system; Sequence analysis; Major histocompatibility complex; Complementary DNA","score_opus":0.024884134914879178,"score_gpt":0.2745842283257776,"score_spread":0.24970009341089844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073697780","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967438,0.0005455692,0.0010720032,0.000053632775,0.000015349277,0.000008480428,0.0006712712,0.00002146413,0.0008685159],"genre_scores_gemma":[0.9901405,0.00058269023,0.0031914834,0.00010080796,0.000017561337,0.000018771785,0.0014839193,0.000028221848,0.0044359774],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999558,0.0000023744785,0.000002969123,0.000018732966,0.000008993019,0.000011150614],"domain_scores_gemma":[0.99988973,0.000016511895,0.00003195683,0.000008181897,0.000024264109,0.000029308605],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006802088,0.00020099842,0.00021164224,0.00041446503,0.00023036634,0.00030906027,0.000108213,0.00021702712,0.000609929],"category_scores_gemma":[0.00007682624,0.0001367587,0.0002150597,0.00017516872,0.00024220328,0.00017466421,0.00014895675,0.0004240145,0.00030688755],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006692734,0.000005383128,0.001087495,0.0000133548165,0.0000027939316,0.00004912731,0.00001695513,0.000015288246,0.9980197,0.00003063956,0.00001209627,0.00068023906],"study_design_scores_gemma":[0.00003775239,0.00048740814,0.31884053,0.000017334289,0.00009916179,0.0012281844,0.00040325345,0.0014652235,0.67344457,0.00019211322,0.0037672496,0.000017255285],"about_ca_topic_score_codex":0.001657086,"about_ca_topic_score_gemma":0.0037496754,"teacher_disagreement_score":0.001657086,"about_ca_system_score_codex":0.00031147047,"about_ca_system_score_gemma":0.00017893325,"threshold_uncertainty_score":0.0032948256},"labels":[],"label_agreement":null},{"id":"W2073760661","doi":"10.1038/ni.1933","title":"Caspase-12 controls West Nile virus infection via the viral RNA receptor RIG-I","year":2010,"lang":"en","type":"article","venue":"Nature Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":98,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Howard Hughes Medical Institute","keywords":"RIG-I; Biology; Interferon; Inflammasome; Interferon type I; Virology; Caspase 8; Ubiquitin ligase; Ubiquitin; Virus; Innate immune system; Pattern recognition receptor; Interferon regulatory factors; Caspase 1; Caspase; Immune system; Apoptosis; Immunology; Programmed cell death; Inflammation; Gene","score_opus":0.004057799718977152,"score_gpt":0.23515304940460305,"score_spread":0.2310952496856259,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073760661","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9735477,0.0071136486,0.008673883,0.0007359221,0.00026523694,0.000049614566,0.00066276273,0.0006079655,0.008343263],"genre_scores_gemma":[0.99307257,0.0008526431,0.0013451121,0.000069322734,0.000029542995,0.000019313631,0.00026161052,0.000043053147,0.004306777],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995678,0.00008642291,0.000035069523,0.00008324957,0.00006996892,0.00015755488],"domain_scores_gemma":[0.99942493,0.00010245802,0.00018538213,0.0000853073,0.00008989201,0.00011195695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004393248,0.00045679268,0.0003270354,0.00045061656,0.0003216603,0.0012063949,0.00040139092,0.00046223993,0.0029463517],"category_scores_gemma":[0.0005690023,0.00026817815,0.00033700548,0.00015074985,0.00064828986,0.0011097393,0.0006165354,0.001222479,0.0015935237],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010414093,0.000040021667,0.0006462744,0.00007960679,0.000010707653,0.00010829527,0.00007791808,0.00019654506,0.9916387,0.0008567724,0.00023750089,0.005066224],"study_design_scores_gemma":[0.00013425814,0.00037886715,0.011935753,0.00002732285,0.000026506066,0.00046531064,0.00029014284,0.004125138,0.9751844,0.0015164771,0.005891535,0.00002442254],"about_ca_topic_score_codex":0.0002890283,"about_ca_topic_score_gemma":0.00048975606,"teacher_disagreement_score":0.0029463517,"about_ca_system_score_codex":0.0007602355,"about_ca_system_score_gemma":0.00028696732,"threshold_uncertainty_score":0.009856522},"labels":[],"label_agreement":null},{"id":"W2075489745","doi":"10.1016/j.chom.2007.11.005","title":"Ub Surprised: Viral Ovarian Tumor Domain Proteases Remove Ubiquitin and ISG15 Conjugates","year":2007,"lang":"en","type":"review","venue":"Cell Host & Microbe","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"ISG15; Biology; Proteases; Ubiquitin; Virology; Cell biology; Protease; Biochemistry; Enzyme; Gene","score_opus":0.02146289942386655,"score_gpt":0.2889305229507708,"score_spread":0.2674676235269043,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075489745","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0022787603,0.9877259,0.003053713,0.00074195524,0.0013381202,0.000024866054,0.00007604116,0.0000919641,0.0046687457],"genre_scores_gemma":[0.009510102,0.97406715,0.0023440965,0.00079721014,0.0005699834,0.00003839377,0.0002449117,0.00001452022,0.01241348],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998853,0.0000108299255,0.000010607924,0.000020337742,0.000054456003,0.000018417019],"domain_scores_gemma":[0.99992645,0.00001731286,0.000018314313,0.0000054940424,0.000020618001,0.000011740615],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038813933,0.0011916892,0.0012270397,0.0006134999,0.00020943429,0.0008582735,0.00075603067,0.0012173854,0.0013507747],"category_scores_gemma":[0.00020888925,0.00028311115,0.00028554897,0.0007271071,0.00045264364,0.0009596518,0.00048308403,0.0012476898,0.002285458],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002708873,0.00008345552,0.00019346339,0.0025681348,0.000059119488,0.00052020437,0.000025589497,0.0005101974,0.040327024,0.003612034,0.028700713,0.9231292],"study_design_scores_gemma":[0.0000552101,0.00015470227,0.00084570964,0.00024886176,0.00006226731,0.0020846222,0.000033196156,0.00034090062,0.042486593,0.0017485857,0.9519177,0.000021587271],"about_ca_topic_score_codex":0.0003162475,"about_ca_topic_score_gemma":0.00061904016,"teacher_disagreement_score":0.0013507747,"about_ca_system_score_codex":0.0007016296,"about_ca_system_score_gemma":0.00047559742,"threshold_uncertainty_score":0.005090773},"labels":[],"label_agreement":null},{"id":"W2075666829","doi":"10.1016/j.antiviral.2013.04.013","title":"Viral envelope glycoprotein processing by proprotein convertases","year":2013,"lang":"en","type":"review","venue":"Antiviral Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute; Université de Montréal","funders":"Université de Lausanne; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Viral envelope; Glycoprotein; Biology; Viral pathogenesis; Furin; Viral entry; Virology; Virus; Computational biology; Cell biology; Viral replication; Genetics; Enzyme","score_opus":0.11346925902047274,"score_gpt":0.4158452883780427,"score_spread":0.30237602935756996,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075666829","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00014899511,0.9975358,0.00036048103,0.00021378887,0.00053294195,0.000006925702,0.000018432169,0.000009968352,0.0011725735],"genre_scores_gemma":[0.0008389766,0.9969207,0.00034773388,0.00016945433,0.00054880173,0.000008135592,0.00005292661,0.0000021476978,0.001111243],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99983203,0.000020561116,0.00002355629,0.000033341952,0.00006443534,0.000025981873],"domain_scores_gemma":[0.99980253,0.00006410266,0.000036174886,0.000008267901,0.00006247129,0.000026461421],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005428334,0.0015479206,0.001275828,0.0015141583,0.00022970614,0.0012087321,0.0008289211,0.0010649866,0.001979716],"category_scores_gemma":[0.0005377836,0.00039622525,0.00032210958,0.0017817171,0.00065095763,0.0015480297,0.0007380275,0.0019483856,0.002056659],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012357146,0.00006186448,0.00010454012,0.0067512663,0.00004020323,0.00023237274,0.000021104064,0.000341417,0.0058147735,0.0021987364,0.03279534,0.95151484],"study_design_scores_gemma":[0.000035640292,0.00007369067,0.0005663747,0.0012223698,0.000074735086,0.0012810925,0.000038269467,0.0001780676,0.0022902775,0.002283631,0.9919344,0.000021283375],"about_ca_topic_score_codex":0.0007802039,"about_ca_topic_score_gemma":0.0012376403,"teacher_disagreement_score":0.001979716,"about_ca_system_score_codex":0.00079095736,"about_ca_system_score_gemma":0.0011321176,"threshold_uncertainty_score":0.0066227913},"labels":[],"label_agreement":null},{"id":"W2076007110","doi":"10.1158/1538-7445.am2011-267","title":"Abstract 267: E2F1 regulates human TRAIL promoter and mediates Interferon alpha 2a response","year":2011,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"E2F1; E2F; Transcription factor; Transactivation; NFAT; Biology; Chromatin immunoprecipitation; Reporter gene; Transfection; Molecular biology; Cell biology; Promoter; Cancer research; Gene expression; Cell culture; Gene; Genetics","score_opus":0.11003279211677686,"score_gpt":0.37864306838071504,"score_spread":0.2686102762639382,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076007110","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9744635,0.005680805,0.0077071553,0.00048875954,0.00022010232,0.00011449213,0.004832379,0.00028167598,0.0062110485],"genre_scores_gemma":[0.9640097,0.001273366,0.0037605285,0.00019436791,0.000060096536,0.000118344164,0.010857303,0.00009770301,0.019628653],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982685,0.0000258469,0.000011442496,0.000037566588,0.000039694496,0.000058677644],"domain_scores_gemma":[0.9998411,0.000046374604,0.00003339129,0.000014326928,0.000027216865,0.000037625992],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015795429,0.0006130741,0.00023498006,0.00049673906,0.0002721105,0.000359933,0.0001762833,0.00028952444,0.0066722804],"category_scores_gemma":[0.00018274259,0.0001705588,0.00033934513,0.00018610524,0.00019482948,0.00013973171,0.00026522702,0.00046145514,0.0042982227],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023991459,0.00006801243,0.00024290959,0.000041697065,0.0000030797828,0.000106942774,0.000022117158,0.00003762166,0.9974317,0.00013927696,0.0002709762,0.0013956696],"study_design_scores_gemma":[0.000082014216,0.00027140696,0.012092761,0.00003531103,0.000011709789,0.00059782487,0.00007202378,0.0014084451,0.9751271,0.00011805068,0.01017515,0.000008151465],"about_ca_topic_score_codex":0.0010456303,"about_ca_topic_score_gemma":0.0008144392,"teacher_disagreement_score":0.0066722804,"about_ca_system_score_codex":0.00061161595,"about_ca_system_score_gemma":0.00025859746,"threshold_uncertainty_score":0.022321045},"labels":[],"label_agreement":null},{"id":"W2076362564","doi":"10.1189/jlb.0113012","title":"Translational control of human neutrophil responses by MNK1","year":2013,"lang":"en","type":"article","venue":"Journal of Leukocyte Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire de Sherbrooke; Université de Sherbrooke","funders":"Canadian Institutes of Health Research; Arthritis Society","keywords":"PI3K/AKT/mTOR pathway; Biology; EIF4E; MAPK/ERK pathway; Phosphorylation; p38 mitogen-activated protein kinases; Translation (biology); Inflammation; Protein kinase B; Cell biology; Immunology; Signal transduction; Messenger RNA; Gene; Genetics","score_opus":0.012296955898077324,"score_gpt":0.26610430937608504,"score_spread":0.2538073534780077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076362564","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98765194,0.007727006,0.0022123384,0.0001930629,0.000058249618,0.000042364045,0.0009027997,0.00006398006,0.001148254],"genre_scores_gemma":[0.9907203,0.003140778,0.0021783416,0.00008046627,0.000013891444,0.000045628803,0.0020752011,0.000018271907,0.001727017],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998913,0.000019534458,0.000013564446,0.000027143193,0.000020060856,0.000028376808],"domain_scores_gemma":[0.99994326,0.000007553694,0.000024321847,0.0000066805965,0.0000074559434,0.000010662478],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018625293,0.00029031056,0.00019724124,0.00012929185,0.00017960194,0.0002615514,0.00012727766,0.000115253286,0.0014622117],"category_scores_gemma":[0.0001196911,0.000077044504,0.00019069185,0.00013289523,0.00013336557,0.00009548217,0.00016031499,0.0003418051,0.00046067504],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006111657,0.00003615026,0.00024231158,0.000093748764,0.000006230508,0.000029355275,0.000017709905,0.00010225274,0.99652594,0.00014082176,0.00009747874,0.002096901],"study_design_scores_gemma":[0.000060501072,0.00029330005,0.0047463165,0.000012571988,0.000016617987,0.00018194558,0.000021017548,0.0007224979,0.98827446,0.000057331374,0.005606786,0.000006546241],"about_ca_topic_score_codex":0.0007381654,"about_ca_topic_score_gemma":0.0012435463,"teacher_disagreement_score":0.0014622117,"about_ca_system_score_codex":0.000511525,"about_ca_system_score_gemma":0.00032733142,"threshold_uncertainty_score":0.004891634},"labels":[],"label_agreement":null},{"id":"W2076690763","doi":"10.1038/ng1845","title":"Mutations in the gene encoding the 3′-5′ DNA exonuclease TREX1 cause Aicardi-Goutières syndrome at the AGS1 locus","year":2006,"lang":"en","type":"article","venue":"Nature Genetics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":892,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Montreal Neurological Institute and Hospital","funders":"Medical Research Council; University of California, Santa Cruz","keywords":"Biology; Exonuclease; Phenotype; Gene; Innate immune system; Genetics; Locus (genetics); Loss function; Immune system; Polymerase","score_opus":0.00892631937471452,"score_gpt":0.2432654752861646,"score_spread":0.23433915591145008,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076690763","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99587196,0.00045625193,0.0015716451,0.00034862303,0.000048774713,0.000017428052,0.00020791093,0.00020668443,0.0012706522],"genre_scores_gemma":[0.9975496,0.0001903721,0.0010906747,0.00006814097,0.00004893251,0.000008530356,0.000101878635,0.000035108398,0.000906854],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99979347,0.000038874616,0.000021869262,0.000056320492,0.00006213626,0.000027499062],"domain_scores_gemma":[0.99921846,0.00037247207,0.00022830839,0.000035703804,0.000020419959,0.00012459974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013326578,0.0014808218,0.0005573624,0.0012069737,0.0005232388,0.00032557672,0.00036773132,0.0019097968,0.002681409],"category_scores_gemma":[0.00078596955,0.00034662633,0.0004813204,0.00048068448,0.0009495911,0.00025806128,0.00034810396,0.0011792841,0.00065165287],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001295903,0.00015294952,0.024910958,0.00018041237,0.00016334426,0.16238026,0.0007205891,0.0017874911,0.7890908,0.0019625225,0.0014431359,0.01591165],"study_design_scores_gemma":[0.00044163244,0.0005990378,0.2100082,0.000096844145,0.00035524898,0.4687962,0.00037717982,0.0063795224,0.30411413,0.0024718125,0.0062267957,0.00013342804],"about_ca_topic_score_codex":0.0011213832,"about_ca_topic_score_gemma":0.0010945576,"teacher_disagreement_score":0.002681409,"about_ca_system_score_codex":0.00040440477,"about_ca_system_score_gemma":0.00019092108,"threshold_uncertainty_score":0.008970201},"labels":[],"label_agreement":null},{"id":"W2076770530","doi":"10.1089/107999002753452601","title":"Interferon Regulatory Factors: Bridging Antiviral Defense, Growth Control, and Immunoregulation","year":2002,"lang":"en","type":"article","venue":"Journal of Interferon & Cytokine Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Interferon regulatory factors; Interferon; Cytokine; Biology; IRF7; IRF1; Virology; Immunology; Immune system; Genetics; Transcription factor; Gene; Innate immune system","score_opus":0.04184114606713927,"score_gpt":0.29766825088385335,"score_spread":0.25582710481671406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076770530","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45902494,0.4650997,0.027773077,0.013226099,0.0020321961,0.000061782615,0.0003882324,0.00044711196,0.031946886],"genre_scores_gemma":[0.90159583,0.0724531,0.012662184,0.0015359104,0.0013324955,0.000033493277,0.00039952435,0.00006721171,0.0099202255],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997409,0.000045028293,0.00001067546,0.000042806336,0.00005768738,0.00010285574],"domain_scores_gemma":[0.99976224,0.000052389252,0.00005520821,0.000021381298,0.000036501293,0.00007237608],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007741533,0.00062596414,0.00060208805,0.00047104905,0.00048609925,0.001861015,0.00041146076,0.00076482166,0.0017109847],"category_scores_gemma":[0.0004580458,0.00022766832,0.00022897472,0.00033203274,0.0010863354,0.0019120497,0.00065745716,0.0014115315,0.000657869],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002240983,0.00010653672,0.0033191014,0.00062859396,0.000041607294,0.0010791706,0.00043479065,0.00046115092,0.72576886,0.05993426,0.0046763197,0.20130855],"study_design_scores_gemma":[0.00036383647,0.0014660918,0.024900675,0.0009342414,0.0002407676,0.00681983,0.0019864314,0.004934987,0.5113827,0.096400544,0.35042527,0.00014469378],"about_ca_topic_score_codex":0.00042592804,"about_ca_topic_score_gemma":0.0007103677,"teacher_disagreement_score":0.001861015,"about_ca_system_score_codex":0.0007561035,"about_ca_system_score_gemma":0.0005315117,"threshold_uncertainty_score":0.0057237744},"labels":[],"label_agreement":null},{"id":"W2077424157","doi":"10.1371/journal.ppat.1003416","title":"Genome-wide RNAi Screen Reveals a New Role of a WNT/CTNNB1 Signaling Pathway as Negative Regulator of Virus-induced Innate Immune Responses","year":2013,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Saint-Luc; Montreal Clinical Research Institute; Université de Montréal; Institute for Research in Immunology and Cancer","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; National Institutes of Health; Canadian Liver Foundation","keywords":"Innate immune system; Biology; Wnt signaling pathway; MDA5; RIG-I; RNA interference; Gene knockdown; Sendai virus; Cell biology; Signal transduction; IRF3; Interferon; Effector; Gene silencing; Intrinsic immunity; Immune system; Gene; Virus; Virology; Genetics; RNA","score_opus":0.017888227326217507,"score_gpt":0.23160298661153106,"score_spread":0.21371475928531355,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077424157","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9756075,0.00469361,0.013530119,0.00028890555,0.000045934627,0.00007878077,0.0026203082,0.0003873094,0.0027475394],"genre_scores_gemma":[0.982476,0.0023462316,0.0071397545,0.00018738573,0.000009693138,0.00005947327,0.0037593716,0.0000939539,0.0039281514],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998983,0.000010219552,0.0000114965305,0.000031552492,0.000035163346,0.000013279846],"domain_scores_gemma":[0.9999182,0.000013739075,0.000028420309,0.000008634868,0.000009843645,0.000021124733],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012254785,0.00049144466,0.00037974384,0.00034136925,0.00018238556,0.00034044313,0.00022346174,0.00027307105,0.0011254037],"category_scores_gemma":[0.00009788103,0.00020051298,0.00028113605,0.00018812988,0.00018109058,0.00012755237,0.00018958432,0.00043530593,0.00039648562],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030460691,0.0000044268822,0.00020951896,0.000019247278,0.0000043364753,0.0000534457,0.0000033165493,0.00002889378,0.99900216,0.00004132335,0.000022099484,0.0005807501],"study_design_scores_gemma":[0.000023917852,0.00007578393,0.018810023,0.000013359881,0.00007930099,0.0006968472,0.000022706403,0.0022513035,0.9735214,0.00009961401,0.004395543,0.000010189749],"about_ca_topic_score_codex":0.00077956996,"about_ca_topic_score_gemma":0.002171749,"teacher_disagreement_score":0.0011254037,"about_ca_system_score_codex":0.00037220027,"about_ca_system_score_gemma":0.00021455403,"threshold_uncertainty_score":0.0037648082},"labels":[],"label_agreement":null},{"id":"W2077531012","doi":"10.1053/jhep.2001.23077","title":"Resistance to Fulminant Hepatitis and Carcinogenesis Conferred by Overexpression of Retinoblastoma Protein in Mouse Liver","year":2001,"lang":"en","type":"article","venue":"Hepatology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Aging","funders":"","keywords":"Carcinogenesis; Transgene; Genetically modified mouse; Biology; Retinoblastoma; Cancer research; HBx; Gene; Hepatocyte; Enhancer; Hepatocyte nuclear factor 4; Molecular biology; Transfection; Gene expression; Transcription factor; In vitro; Genetics","score_opus":0.009199315240414799,"score_gpt":0.22360941228505135,"score_spread":0.21441009704463654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077531012","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934302,0.0011403012,0.0039850404,0.00012309293,0.00001713326,0.000021290987,0.00011963675,0.00023058169,0.00093273574],"genre_scores_gemma":[0.9938332,0.0008415272,0.0023902555,0.000031193882,0.000012334097,0.000029839422,0.00026458726,0.000039177048,0.0025578132],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997819,0.000054801178,0.000023557828,0.000040215673,0.000045192246,0.00005433096],"domain_scores_gemma":[0.9997459,0.000040075287,0.000094634524,0.000046789086,0.000015243653,0.000057348836],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030704704,0.00045210612,0.0002732143,0.00048261532,0.00013135855,0.0002829684,0.00015500025,0.00038616464,0.000790778],"category_scores_gemma":[0.00020581245,0.00022707194,0.00023095461,0.00014591112,0.00027905658,0.00023538257,0.00019876915,0.00061258493,0.00041025146],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007440107,0.000012168736,0.00009694423,0.00000921032,0.000002090071,0.000041386345,0.000010152389,0.00002745085,0.9991072,0.000090238296,0.0000108431095,0.00051778695],"study_design_scores_gemma":[0.000040357245,0.00061679195,0.0015516821,0.000005569143,0.000016920814,0.00059998734,0.000013303509,0.0004700632,0.99498594,0.000093814706,0.0016008202,0.0000046418863],"about_ca_topic_score_codex":0.00016859118,"about_ca_topic_score_gemma":0.00020868084,"teacher_disagreement_score":0.000790778,"about_ca_system_score_codex":0.00019817267,"about_ca_system_score_gemma":0.000118056225,"threshold_uncertainty_score":0.002645433},"labels":[],"label_agreement":null},{"id":"W2077620427","doi":"10.1128/jvi.01531-10","title":"The IFITM Proteins Inhibit HIV-1 Infection","year":2010,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":410,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research; Canadian Foundation for AIDS Research","keywords":"Biology; Interferon; Innate immune system; Virology; Transmembrane protein; Virus; Mutagenesis; Viral replication; Antiviral protein; Small hairpin RNA; Gene; Immune system; RNA; Genetics; Mutation; Receptor","score_opus":0.005639759754412419,"score_gpt":0.23497455691985056,"score_spread":0.22933479716543814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077620427","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99111545,0.0031784195,0.0020999205,0.0002507035,0.00006113478,0.00003377114,0.00023094303,0.00013696344,0.0028928265],"genre_scores_gemma":[0.9927583,0.001167375,0.0028942628,0.00011496367,0.00002464552,0.00004557539,0.00047548887,0.000017552022,0.00250183],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991965,0.000015564217,0.000005813439,0.000008495627,0.000019428371,0.00003098705],"domain_scores_gemma":[0.9999372,0.000017754639,0.000011651951,0.000010249914,0.000008723181,0.000014424511],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014437009,0.00027484613,0.00020737432,0.0001574214,0.00013009817,0.00016841092,0.00013320708,0.00021730104,0.0010530535],"category_scores_gemma":[0.00015082188,0.000064281034,0.00016320523,0.0000676992,0.0001303474,0.000106433436,0.000119683675,0.000574684,0.00029888455],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001664848,0.00009133723,0.00025741712,0.00003548999,0.0000056506583,0.00003300666,0.000009267419,0.00013152372,0.9897899,0.00014638582,0.0002748852,0.009058618],"study_design_scores_gemma":[0.000039395334,0.00070753164,0.0031464496,0.000008149715,0.000010190817,0.0002683887,0.000015746498,0.0012701638,0.990721,0.00011022174,0.0037001702,0.000002546395],"about_ca_topic_score_codex":0.0001762902,"about_ca_topic_score_gemma":0.00035137177,"teacher_disagreement_score":0.0010530535,"about_ca_system_score_codex":0.00016129845,"about_ca_system_score_gemma":0.00011358151,"threshold_uncertainty_score":0.003522873},"labels":[],"label_agreement":null},{"id":"W2079623756","doi":"10.1038/mt.2010.124","title":"Recognition of Virus Infection and Innate Host Responses to Viral Gene Therapy Vectors","year":2010,"lang":"en","type":"review","venue":"Molecular Therapy","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":58,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Cancer Institute; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Virology; Innate immune system; Host (biology); Biology; Genetic enhancement; Virus; Gene; Vector (molecular biology); Vectors in gene therapy; Viral vector; Immunology; Genetics; Immune system; Recombinant DNA","score_opus":0.03614803860165269,"score_gpt":0.313376192816046,"score_spread":0.2772281542143933,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079623756","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015517013,0.99618405,0.0006959736,0.00039455315,0.00073091045,0.000006512993,0.000009421355,0.000009589781,0.0018138336],"genre_scores_gemma":[0.0011566543,0.9941806,0.00070967746,0.00045289897,0.00076502323,0.000017500495,0.000031538857,0.0000032784076,0.0026827722],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99984217,0.00002581606,0.000019345589,0.00002793997,0.000069526504,0.000015268024],"domain_scores_gemma":[0.99974555,0.00012942392,0.00003215327,0.00000961128,0.000059416598,0.00002376708],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006420332,0.0011372957,0.0013886602,0.0014020851,0.00024022475,0.00092602515,0.00087240204,0.0015938272,0.0020553304],"category_scores_gemma":[0.0005335723,0.00029467858,0.00028421727,0.0011149723,0.00086108607,0.0013775332,0.00045137305,0.0024260588,0.0017927438],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000102547674,0.000089868365,0.00012835879,0.005852812,0.00003747836,0.000271635,0.00004471742,0.0003502663,0.008804019,0.0070362864,0.040294494,0.93698734],"study_design_scores_gemma":[0.00002483953,0.000073276125,0.00042676154,0.0010799262,0.000049588485,0.0019575143,0.000038066017,0.00014964318,0.0024329294,0.0029170492,0.9908345,0.000015863556],"about_ca_topic_score_codex":0.000655507,"about_ca_topic_score_gemma":0.0016015581,"teacher_disagreement_score":0.0020553304,"about_ca_system_score_codex":0.0007879779,"about_ca_system_score_gemma":0.0007120703,"threshold_uncertainty_score":0.006875694},"labels":[],"label_agreement":null},{"id":"W2079636726","doi":"10.1016/j.gene.2009.10.005","title":"Molecular mechanisms of turtle anoxia tolerance: A role for NF-κB","year":2009,"lang":"en","type":"article","venue":"Gene","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; P50; Transcription factor; Messenger RNA; Phosphorylation; Transcription (linguistics); Effector; NF-κB; Molecular biology; Gene; Cell biology; Gene expression; Protein subunit; Signal transduction; Biochemistry","score_opus":0.006324671686348991,"score_gpt":0.23176137551446083,"score_spread":0.22543670382811185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079636726","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9485854,0.030006917,0.013612942,0.0020315861,0.00039531698,0.000036939513,0.00029730165,0.00028315443,0.0047505246],"genre_scores_gemma":[0.9870842,0.00465048,0.0019417607,0.00027632705,0.00009543007,0.00003785437,0.00017511129,0.000016511915,0.0057222783],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999,0.000011878378,0.0000044950602,0.000029205778,0.00001594218,0.000038436578],"domain_scores_gemma":[0.9998301,0.000014740067,0.000058701124,0.00001957836,0.000027242224,0.0000494312],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022489898,0.000515305,0.00025383118,0.00031145886,0.0003194438,0.00058670103,0.00040949738,0.00044934367,0.0013246036],"category_scores_gemma":[0.00012563942,0.00012401528,0.0003457506,0.000092362185,0.0008034107,0.0007255521,0.000368276,0.0008262702,0.00026329255],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00060180615,0.00006855884,0.0022173114,0.00018078925,0.000032814616,0.0004209173,0.00011655725,0.00028322398,0.98618317,0.0023442404,0.00037115504,0.0071795415],"study_design_scores_gemma":[0.000217028,0.0019638033,0.110220335,0.00033863928,0.0002658185,0.002710563,0.0017253474,0.0067257476,0.8314344,0.015108678,0.029187504,0.00010205868],"about_ca_topic_score_codex":0.0003961701,"about_ca_topic_score_gemma":0.0006354616,"teacher_disagreement_score":0.0013246036,"about_ca_system_score_codex":0.00042746577,"about_ca_system_score_gemma":0.00022892887,"threshold_uncertainty_score":0.004431188},"labels":[],"label_agreement":null},{"id":"W2079694321","doi":"10.1128/mcb.25.14.6247-6258.2005","title":"Gamma Interferon-Inducible Protein 10 Induces HeLa Cell Apoptosis through a p53-Dependent Pathway Initiated by Suppression of Human Papillomavirus Type 18 E6 and E7 Expression","year":2005,"lang":"en","type":"article","venue":"Molecular and Cellular Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; Heart and Stroke Foundation of British Columbia and Yukon; Cleveland Clinic; Cleveland Clinic Foundation; Heart and Stroke Foundation of Canada","keywords":"Biology; Apoptosis; Transfection; HeLa; Signal transduction; Interferon; Molecular biology; Chemokine; Viral replication; Oncogene; Cell culture; Cell biology; Cell cycle; Cancer research; Virology; Immunology; Genetics; Immune system","score_opus":0.021120817708531216,"score_gpt":0.2625516229684632,"score_spread":0.24143080525993196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079694321","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99449843,0.0012492909,0.0014367211,0.000093439965,0.000036429985,0.000025675734,0.00033992916,0.00010567052,0.0022145144],"genre_scores_gemma":[0.9959941,0.00066653086,0.0008062332,0.0000539137,0.000010065476,0.000045186156,0.0005649663,0.000011872602,0.001847056],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990344,0.000014609465,0.000008682501,0.00001512017,0.000021094627,0.000036985977],"domain_scores_gemma":[0.99992,0.000021006743,0.00001837741,0.000015354153,0.000009481683,0.000015735079],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007716384,0.00031001703,0.00016678504,0.0001909331,0.00014111516,0.00022613535,0.00011539933,0.00018167376,0.0010930835],"category_scores_gemma":[0.00009422547,0.00010396014,0.00024291743,0.00011165565,0.00017292636,0.00013404102,0.00015187133,0.00035313866,0.00036935788],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000107764376,0.000029446532,0.0002176732,0.000026818636,0.0000043929904,0.00008894619,0.000019709905,0.00003506838,0.99848145,0.000077143995,0.000060418228,0.0008511971],"study_design_scores_gemma":[0.000017167938,0.00027695944,0.004456642,0.0000064510923,0.000011196764,0.00020729935,0.000025894968,0.0008436916,0.99250996,0.000040785264,0.0016013209,0.0000026179064],"about_ca_topic_score_codex":0.00056745956,"about_ca_topic_score_gemma":0.0005852512,"teacher_disagreement_score":0.0010930835,"about_ca_system_score_codex":0.00030585035,"about_ca_system_score_gemma":0.00018107246,"threshold_uncertainty_score":0.003656745},"labels":[],"label_agreement":null},{"id":"W2080395907","doi":"10.1099/vir.0.018465-0","title":"The PI3K/Akt pathway inhibits influenza A virus-induced Bax-mediated apoptosis by negatively regulating the JNK pathway via ASK1","year":2010,"lang":"en","type":"article","venue":"Journal of General Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research; Saskatchewan Health Research Foundation","keywords":"PI3K/AKT/mTOR pathway; Biology; Protein kinase B; Apoptosis; Kinase; Virus; Cell biology; Signal transduction; Influenza A virus; Phosphorylation; Virology; Wortmannin; Phosphatidylinositol; Biochemistry","score_opus":0.011694444885952346,"score_gpt":0.2415900447030502,"score_spread":0.22989559981709787,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080395907","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99415416,0.0024799984,0.0011709669,0.00014746,0.000041468633,0.000033510627,0.00014317059,0.00008050574,0.0017487819],"genre_scores_gemma":[0.9953981,0.0016121756,0.0012646565,0.00004275009,0.000024417805,0.000042746866,0.00028009267,0.000011130022,0.0013239293],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987805,0.000030562853,0.000013893392,0.00001019953,0.000025853795,0.000041406234],"domain_scores_gemma":[0.9999354,0.000013602795,0.000015323436,0.000007438548,0.0000082467905,0.000019960939],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001888576,0.0004995141,0.00029274225,0.00024410244,0.00020860384,0.00024137957,0.00022342255,0.00019731309,0.0011985559],"category_scores_gemma":[0.00014953937,0.00014105959,0.00023720789,0.00013044314,0.00025759888,0.00023937169,0.00019586808,0.0007810895,0.00046152336],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012468857,0.0003816507,0.00034667138,0.00014815212,0.000021462929,0.00005639337,0.000024987205,0.00022935748,0.99079144,0.00016195314,0.00019812508,0.0063929157],"study_design_scores_gemma":[0.00030550253,0.0021614404,0.0076614628,0.000018760813,0.000042894073,0.00035037915,0.000040394905,0.0034338403,0.9830921,0.00019573989,0.0026891828,0.000008195234],"about_ca_topic_score_codex":0.00037205004,"about_ca_topic_score_gemma":0.0006501219,"teacher_disagreement_score":0.0011985559,"about_ca_system_score_codex":0.0002028962,"about_ca_system_score_gemma":0.00038207675,"threshold_uncertainty_score":0.0040096045},"labels":[],"label_agreement":null},{"id":"W2080852228","doi":"10.1016/j.cyto.2012.06.222","title":"P130 IRF9 binds to the interferon-B promoter and mediates interferon production in the absence of IRF3 in response to double-stranded RNA","year":2012,"lang":"en","type":"article","venue":"Cytokine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"IRF3; Interferon; Virology; Production (economics); RNA; Chemistry; Biology; Genetics; Gene; Transcription factor; Economics","score_opus":0.021226252365814408,"score_gpt":0.2731246044638137,"score_spread":0.25189835209799927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080852228","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9849688,0.0018669782,0.007131001,0.00043723162,0.00013159787,0.000037704212,0.0008414621,0.00022035828,0.004364865],"genre_scores_gemma":[0.99123806,0.0004501791,0.0025433144,0.00009733912,0.000042255117,0.000024161875,0.001700988,0.00007610862,0.003827453],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99950075,0.00006921357,0.000023087752,0.00008639882,0.00014479348,0.00017578824],"domain_scores_gemma":[0.99974865,0.000057968427,0.000047716596,0.000035724857,0.000026540563,0.00008335123],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035106056,0.0005640225,0.00034136957,0.00039458048,0.0004562709,0.0006059515,0.0004681183,0.0006480236,0.0045687566],"category_scores_gemma":[0.00035314373,0.00041559935,0.00050947134,0.00015923985,0.0006327743,0.00051215,0.00055320846,0.0012482164,0.0016192757],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014778203,0.000010135724,0.00008457007,0.000017075341,0.000002847644,0.000040145907,0.0000060001453,0.000019945493,0.9990007,0.0001648563,0.000066714136,0.0004391574],"study_design_scores_gemma":[0.000040863026,0.0000769141,0.0046442123,0.00000969091,0.000008194692,0.00045495774,0.000033314904,0.0009306425,0.9911255,0.00024128612,0.0024268415,0.0000076295855],"about_ca_topic_score_codex":0.0007292357,"about_ca_topic_score_gemma":0.0012260169,"teacher_disagreement_score":0.0045687566,"about_ca_system_score_codex":0.00076182804,"about_ca_system_score_gemma":0.00039172385,"threshold_uncertainty_score":0.015284002},"labels":[],"label_agreement":null},{"id":"W2081359858","doi":"10.1073/pnas.1322118111","title":"NLRX1 prevents mitochondrial induced apoptosis and enhances macrophage antiviral immunity by interacting with influenza virus PB1-F2 protein","year":2014,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":114,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Biology; Innate immune system; Apoptosis; Macrophage; Viral replication; Influenza A virus; Cell biology; Mitochondrion; Virus; Immune system; Virology; Immunology; In vitro","score_opus":0.021938548370785453,"score_gpt":0.29306063308981434,"score_spread":0.2711220847190289,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081359858","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964529,0.0010862,0.0016690014,0.00013729598,0.000014698267,0.000015124385,0.00008245425,0.00004626548,0.00049588585],"genre_scores_gemma":[0.99654335,0.00052938826,0.0014362988,0.00004161577,0.000012020953,0.000021977581,0.00020247712,0.000011122941,0.0012017252],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998173,0.00005276344,0.000016712318,0.00003081535,0.00003645244,0.00004592599],"domain_scores_gemma":[0.99992454,0.000011255362,0.000026668831,0.000010472638,0.0000074767586,0.000019550804],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022235402,0.00037232714,0.00036101538,0.000120846424,0.0001495552,0.00029219736,0.00024305945,0.00032770267,0.00075128133],"category_scores_gemma":[0.00012169915,0.000096770775,0.00024284194,0.0000728831,0.00026546483,0.00021852879,0.00018769395,0.000557895,0.00033495107],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014978558,0.000041327017,0.00017849282,0.000026954114,0.0000044015396,0.000029939947,0.000011311676,0.000047670423,0.998844,0.000055511064,0.000028294096,0.00058225275],"study_design_scores_gemma":[0.000054269152,0.00057206466,0.0033853154,0.0000066958355,0.00001535876,0.00039882847,0.00003541688,0.0012042922,0.9922857,0.000050050803,0.0019877967,0.00000411058],"about_ca_topic_score_codex":0.00019948398,"about_ca_topic_score_gemma":0.00027555614,"teacher_disagreement_score":0.00075128133,"about_ca_system_score_codex":0.0002158753,"about_ca_system_score_gemma":0.00019021897,"threshold_uncertainty_score":0.0025132895},"labels":[],"label_agreement":null},{"id":"W2081613861","doi":"10.1016/j.immuni.2008.11.006","title":"The Phagosomal Proteome in Interferon-γ-Activated Macrophages","year":2009,"lang":"en","type":"article","venue":"Immunity","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":222,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer; Caprion (Canada); Université de Montréal","funders":"","keywords":"Phagosome; Biology; Cell biology; Antigen presentation; Antigen; Cross-presentation; Antigen processing; Immune system; Phagocytosis; Immunology; T cell","score_opus":0.0105278255266722,"score_gpt":0.26044553110711127,"score_spread":0.24991770558043908,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081613861","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99383,0.0028039264,0.0016023203,0.00019875259,0.00006442191,0.0000057603406,0.00047924966,0.000017560333,0.0009978475],"genre_scores_gemma":[0.9932272,0.001583422,0.0013595361,0.000102989696,0.000039677678,0.000013481226,0.0012455714,0.000018528222,0.0024097194],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999218,0.0000098863175,0.0000055582645,0.00002151606,0.000018015855,0.000023247374],"domain_scores_gemma":[0.9999224,0.000011994734,0.000016650341,0.0000094611205,0.000019741492,0.00001964775],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001674045,0.00018639684,0.00018874885,0.00021545829,0.00028440566,0.00035530937,0.00014798612,0.00041404963,0.0007701589],"category_scores_gemma":[0.0001877507,0.00016141785,0.00023013802,0.00013788478,0.00018554709,0.0004372281,0.0003085807,0.00039613876,0.00054766145],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045452267,0.00000797239,0.00082011445,0.000039310064,0.0000074545655,0.00013106129,0.00003258651,0.0000416206,0.99718934,0.0001951586,0.0000784839,0.0010023287],"study_design_scores_gemma":[0.000055333872,0.000253154,0.10671412,0.000054180986,0.000064645355,0.0021292297,0.00059813156,0.004580769,0.8763534,0.0017615594,0.0073983218,0.000037085123],"about_ca_topic_score_codex":0.0004150496,"about_ca_topic_score_gemma":0.0003676148,"teacher_disagreement_score":0.0007701589,"about_ca_system_score_codex":0.00029970892,"about_ca_system_score_gemma":0.0001916596,"threshold_uncertainty_score":0.0025764108},"labels":[],"label_agreement":null},{"id":"W2081761456","doi":"10.1038/cr.2013.47","title":"IFNβ/TNFα synergism induces a non-canonical STAT2/IRF9-dependent pathway triggering a novel DUOX2 NADPH Oxidase-mediated airway antiviral response","year":2013,"lang":"en","type":"article","venue":"Cell Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":72,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; McGill University","keywords":"Biology; Autocrine signalling; STAT2; STAT1; Paracrine signalling; Interferon; Proinflammatory cytokine; Innate immune system; Influenza A virus; Secretion; Cell biology; Immune system; Signal transduction; Virus; Immunology; Virology; stat; Inflammation; Cell culture; Receptor; Biochemistry; Genetics","score_opus":0.03854670534014484,"score_gpt":0.30586818892212403,"score_spread":0.26732148358197916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081761456","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991732,0.001427366,0.0033202055,0.00019266648,0.0001617295,0.00007497937,0.00047523042,0.00008552068,0.0025301923],"genre_scores_gemma":[0.99588627,0.00032464994,0.0013931909,0.000072663854,0.000029616953,0.00004079849,0.00041998966,0.000009178877,0.0018236204],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996693,0.00007072671,0.000019720692,0.00005744012,0.000054439668,0.00012836457],"domain_scores_gemma":[0.99990773,0.000013883168,0.000019405954,0.000016412168,0.0000094772995,0.000032968044],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029146535,0.00045883877,0.00027000046,0.00015369804,0.00021634284,0.0003011103,0.00016600713,0.00038399926,0.0022444841],"category_scores_gemma":[0.00009352642,0.00015225963,0.0005499345,0.00007350822,0.00019623728,0.00020162974,0.00029294437,0.00084003765,0.00044590628],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028896454,0.00002835548,0.00017555305,0.00002160692,0.0000040213554,0.00009689701,0.000006237218,0.000012682492,0.9987435,0.00008572361,0.000044815046,0.0004916711],"study_design_scores_gemma":[0.00009169007,0.00051352987,0.019713273,0.000012482097,0.000027492912,0.0008267735,0.00008716008,0.00096529274,0.9751567,0.00018433618,0.002415713,0.000005550107],"about_ca_topic_score_codex":0.0001773336,"about_ca_topic_score_gemma":0.00038916548,"teacher_disagreement_score":0.0022444841,"about_ca_system_score_codex":0.00028351307,"about_ca_system_score_gemma":0.00020090703,"threshold_uncertainty_score":0.0075085163},"labels":[],"label_agreement":null},{"id":"W2081978538","doi":"10.3899/jrheum.140949","title":"Variants of the <i>IFI16</i> Gene Affecting the Levels of Expression of mRNA Are Associated with Susceptibility to Behçet Disease","year":2015,"lang":"en","type":"article","venue":"The Journal of Rheumatology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Single-nucleotide polymorphism; Haplotype; AIM2; Biology; Allele; Immunology; SNP; Genotype; Genetics; Gene; Internal medicine; Medicine; Inflammasome; Inflammation","score_opus":0.026036698864264973,"score_gpt":0.25457522830574614,"score_spread":0.22853852944148118,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081978538","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989452,0.000319638,0.00031339735,0.00003938604,0.000009094669,0.0000043028035,0.00017348875,0.000011468541,0.00018410137],"genre_scores_gemma":[0.99938655,0.00007277482,0.0003000263,0.000022608749,0.000013496258,0.00000393211,0.00010503236,0.0000039193587,0.00009161881],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99976605,0.000056238707,0.000029571376,0.0000791978,0.00004206352,0.000026914313],"domain_scores_gemma":[0.9991702,0.0002128485,0.000468978,0.00004142501,0.00004545011,0.00006111358],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030457933,0.00045148793,0.00027377805,0.0004221548,0.00020846944,0.0002276807,0.00015968703,0.00046396465,0.002925388],"category_scores_gemma":[0.00094511284,0.00012218472,0.00026627674,0.00043602294,0.0002805791,0.000098870136,0.00012459335,0.0002930008,0.00027393835],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0037847804,0.000083805455,0.8368751,0.0001314732,0.00054876273,0.0014778026,0.00019632971,0.00044466121,0.14549872,0.00021004789,0.00041586554,0.010332631],"study_design_scores_gemma":[0.00009462502,0.00032209052,0.98719215,0.000027791462,0.00020930327,0.0033542174,0.000057306617,0.0007795949,0.007212591,0.00021151052,0.0005280705,0.000010820712],"about_ca_topic_score_codex":0.000653053,"about_ca_topic_score_gemma":0.0005940605,"teacher_disagreement_score":0.002925388,"about_ca_system_score_codex":0.000109869026,"about_ca_system_score_gemma":0.00007102374,"threshold_uncertainty_score":0.009786427},"labels":[],"label_agreement":null},{"id":"W2082473289","doi":"10.1016/j.cyto.2008.07.186","title":"144 Molecular mechanisms of MHC class II inhibition by the MARCH1 ubiquitin ligase in response to IL-10","year":2008,"lang":"en","type":"article","venue":"Cytokine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Ubiquitin ligase; Ubiquitin; MHC class II; Chemistry; Computational biology; Biology; Major histocompatibility complex; Biochemistry; Gene","score_opus":0.010310858214685796,"score_gpt":0.23294527762697959,"score_spread":0.22263441941229378,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082473289","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9719349,0.013278263,0.0056732125,0.0016812371,0.00024160894,0.000059550228,0.00027271739,0.00013189638,0.006726748],"genre_scores_gemma":[0.99510914,0.0012586142,0.00083845574,0.00010465575,0.00003994218,0.000029148454,0.00014448512,0.000009088536,0.0024665263],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974006,0.000044018663,0.000015644186,0.00004089088,0.000047377875,0.000111919864],"domain_scores_gemma":[0.99988544,0.00001849711,0.00003605369,0.000016938731,0.00001699671,0.000026066706],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036733592,0.00042618148,0.00044131896,0.00026919207,0.00043456466,0.0009214081,0.00048094982,0.0007732386,0.0034998327],"category_scores_gemma":[0.00024064012,0.000259797,0.00056668825,0.00012922024,0.0005330642,0.00071751984,0.0003353022,0.000741837,0.0009319356],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009235392,0.00007380106,0.0008685728,0.00009362546,0.000025399642,0.00035815462,0.000042603664,0.00041333746,0.987187,0.0039163353,0.00042947126,0.005668067],"study_design_scores_gemma":[0.00021478713,0.0006242322,0.026576854,0.000039764716,0.000052468207,0.001400401,0.00020576268,0.008026755,0.9481234,0.004029735,0.010669372,0.000036570145],"about_ca_topic_score_codex":0.0003656533,"about_ca_topic_score_gemma":0.00030731206,"teacher_disagreement_score":0.0034998327,"about_ca_system_score_codex":0.0008959745,"about_ca_system_score_gemma":0.0002724298,"threshold_uncertainty_score":0.01170814},"labels":[],"label_agreement":null},{"id":"W2083122374","doi":"10.1038/ncb2496","title":"TRADD contributes to tumour suppression by regulating ULF-dependent p19Arf ubiquitylation","year":2012,"lang":"en","type":"article","venue":"Nature Cell Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto; Ontario Institute for Cancer Research","funders":"Canadian Institutes of Health Research; University of Toronto","keywords":"TRADD; Death domain; TRAF2; Signal transducing adaptor protein; Cell biology; Ubiquitin ligase; Senescence; Ubiquitin; Biology; Programmed cell death; Tumor necrosis factor alpha; Cancer research; Signal transduction; Apoptosis; Immunology; Tumor necrosis factor receptor; Biochemistry","score_opus":0.006605528492996117,"score_gpt":0.25739199399420554,"score_spread":0.2507864655012094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083122374","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98533154,0.0038825157,0.005865981,0.0004895749,0.00013458895,0.00001765103,0.00049640186,0.00039532586,0.0033863517],"genre_scores_gemma":[0.99762636,0.00023325183,0.0005672578,0.000032136406,0.000010495206,0.0000048048173,0.00017467224,0.000033214663,0.0013178478],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99962246,0.00004834429,0.000042795305,0.000086084285,0.000058354733,0.0001418754],"domain_scores_gemma":[0.9996431,0.000037335587,0.00011739802,0.00008589498,0.00003767182,0.000078652556],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034952725,0.0005547413,0.00032249646,0.00037657234,0.00046935616,0.001074596,0.000565619,0.00047552216,0.0028982025],"category_scores_gemma":[0.00034085152,0.0003227339,0.00062210124,0.00020122508,0.00065405085,0.0006308038,0.0007332213,0.00094748044,0.0012020619],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064132427,0.00003813772,0.0011562303,0.000068212285,0.000015507834,0.00033834612,0.00002291625,0.00023285445,0.9926081,0.0008140739,0.00023314799,0.003831261],"study_design_scores_gemma":[0.000050622777,0.0001418039,0.008438606,0.000007684819,0.00002315945,0.00096832396,0.00007112934,0.0018763666,0.9830587,0.00049187086,0.0048597003,0.00001193393],"about_ca_topic_score_codex":0.0002706956,"about_ca_topic_score_gemma":0.00038215236,"teacher_disagreement_score":0.0028982025,"about_ca_system_score_codex":0.0007124871,"about_ca_system_score_gemma":0.00022553673,"threshold_uncertainty_score":0.00969547},"labels":[],"label_agreement":null},{"id":"W2083294698","doi":"10.1016/j.ajhg.2013.03.020","title":"Yunis-Varón Syndrome Is Caused by Mutations in FIG4, Encoding a Phosphoinositide Phosphatase","year":2013,"lang":"en","type":"article","venue":"The American Journal of Human Genetics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":144,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Center for Advancing Translational Sciences; National Institute of Mental Health; National Institute of General Medical Sciences; National Human Genome Research Institute; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Null allele; Missense mutation; Neurodegeneration; Exome sequencing; Phenotype; Frameshift mutation; Compound heterozygosity; Genetics; Cell biology; Molecular biology; Pathology; Gene","score_opus":0.011475819884840331,"score_gpt":0.2595116953933357,"score_spread":0.24803587550849535,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083294698","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9831715,0.0014260156,0.0035769825,0.00053794926,0.00031945776,0.00007520227,0.0007380388,0.0002361654,0.00991851],"genre_scores_gemma":[0.99177176,0.0006099575,0.0035568294,0.00015025445,0.0001103539,0.000031529722,0.0002994485,0.00007456956,0.0033954429],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.99961567,0.000055647855,0.00004118391,0.00009382891,0.00012450953,0.00006906696],"domain_scores_gemma":[0.9992387,0.00029504596,0.00023516608,0.000030241239,0.000026364907,0.00017448132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023648437,0.003864349,0.000636891,0.0023849076,0.0008477329,0.0004936673,0.0007382298,0.0015125904,0.0037893546],"category_scores_gemma":[0.0010802416,0.000470439,0.00051129906,0.0012250306,0.0014237664,0.00052109687,0.00096581713,0.0006663885,0.0004780119],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009238064,0.00011747791,0.039318115,0.0003070582,0.00021782513,0.68209887,0.00052779226,0.0008737139,0.24880463,0.007638397,0.0012428939,0.017929418],"study_design_scores_gemma":[0.00035922442,0.0003754736,0.09279346,0.0001564513,0.00033796925,0.8237961,0.0006658023,0.002520902,0.05959435,0.0052511003,0.014023629,0.00012552814],"about_ca_topic_score_codex":0.0020799816,"about_ca_topic_score_gemma":0.0028821114,"teacher_disagreement_score":0.003864349,"about_ca_system_score_codex":0.00050726143,"about_ca_system_score_gemma":0.00083937316,"threshold_uncertainty_score":0.012676716},"labels":[],"label_agreement":null},{"id":"W2083874631","doi":"10.1371/journal.ppat.1000099","title":"RIG-I Mediates the Co-Induction of Tumor Necrosis Factor and Type I Interferon Elicited by Myxoma Virus in Primary Human Macrophages","year":2008,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":104,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Robarts Clinical Trials; Public Health Agency of Canada; Western University","funders":"Robarts Research Institute; Canadian Institutes of Health Research; Howard Hughes Medical Institute","keywords":"IRF3; Myxoma virus; Innate immune system; IRF7; Interferon; Biology; Tumor necrosis factor alpha; RIG-I; Interferon type I; Virology; Virus; Immune system; Immunology","score_opus":0.022528481288564474,"score_gpt":0.24594366203853063,"score_spread":0.22341518074996616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083874631","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899686,0.0036252297,0.0035582744,0.00015083386,0.000049434893,0.00005094006,0.00032358928,0.00006937911,0.0022037558],"genre_scores_gemma":[0.9960337,0.00087719527,0.0012722888,0.000040777028,0.000023034123,0.00004943554,0.0002859436,0.000007366411,0.0014102907],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99975055,0.00006768457,0.000023066847,0.00003464263,0.0000434274,0.000080654296],"domain_scores_gemma":[0.9999026,0.00001937743,0.000021536689,0.000022761253,0.00001383731,0.000019852017],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037249847,0.00038308246,0.0002874786,0.00018034223,0.00016888078,0.00034966323,0.00014161672,0.00026525406,0.0014216278],"category_scores_gemma":[0.00020017047,0.00019488354,0.00037122917,0.00008653463,0.0001924773,0.00016678902,0.00036795274,0.00041584644,0.0008865872],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025030455,0.000022042486,0.00057918247,0.000057227433,0.0000053673025,0.0002127744,0.00004399126,0.000032840046,0.9975828,0.00013127351,0.000062805775,0.0010194622],"study_design_scores_gemma":[0.000080501624,0.0004601125,0.011018494,0.000018236788,0.000028457938,0.0014058477,0.00010908023,0.0011080065,0.9820243,0.00020787925,0.0035323245,0.000006704858],"about_ca_topic_score_codex":0.0002902383,"about_ca_topic_score_gemma":0.0003400925,"teacher_disagreement_score":0.0014216278,"about_ca_system_score_codex":0.00025353127,"about_ca_system_score_gemma":0.00020099037,"threshold_uncertainty_score":0.0047558546},"labels":[],"label_agreement":null},{"id":"W2084302392","doi":"10.1523/jneurosci.4579-07.2008","title":"Separate Proteolipid Protein/DM20 Enhancers Serve Different Lineages and Stages of Development","year":2008,"lang":"en","type":"article","venue":"Journal of Neuroscience","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Royal Victoria Hospital","funders":"Institut National de la Santé et de la Recherche Médicale; Genome Canada","keywords":"Biology; Proteolipid protein 1; Enhancer; Gene isoform; Genetics; Myelin proteolipid protein; Gene; Locus (genetics); Transgene; Oligodendrocyte; Phenotype; Myelin; Cell biology; Gene expression; Myelin basic protein; Central nervous system; Neuroscience","score_opus":0.025917351607747,"score_gpt":0.2632540027482468,"score_spread":0.2373366511404998,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084302392","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9696191,0.0009528742,0.02167278,0.00009659124,0.000056340687,0.00015677528,0.00067522423,0.0003302409,0.0064401194],"genre_scores_gemma":[0.9576207,0.00091013516,0.01757449,0.00013894787,0.00001890788,0.00014859014,0.0022158718,0.00024334165,0.021128986],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998456,0.000010761177,0.000012738439,0.000052407664,0.000037432394,0.000040984298],"domain_scores_gemma":[0.9998659,0.000025741567,0.000029653942,0.000011940827,0.000019189129,0.000047490288],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014391541,0.0004288774,0.00013894832,0.00035444362,0.00014467078,0.00021994393,0.00036072603,0.00026946786,0.0027145504],"category_scores_gemma":[0.00014412939,0.00027273776,0.0002573583,0.00011586497,0.00022142947,0.00020386212,0.00047302936,0.00067681837,0.0007651056],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005366175,0.000015036147,0.0002468669,0.000015003329,0.0000014597478,0.00003332557,0.000024234903,0.00002859712,0.9971654,0.00031953867,0.00002192818,0.0020750435],"study_design_scores_gemma":[0.000032507083,0.0001526681,0.00630224,0.00002445088,0.000019404019,0.00035802307,0.000055473887,0.0013424138,0.98171437,0.0001498968,0.009840534,0.0000078758885],"about_ca_topic_score_codex":0.00066570163,"about_ca_topic_score_gemma":0.0017724903,"teacher_disagreement_score":0.0027145504,"about_ca_system_score_codex":0.00036755853,"about_ca_system_score_gemma":0.0002686019,"threshold_uncertainty_score":0.009081066},"labels":[],"label_agreement":null},{"id":"W2084785039","doi":"10.1158/2326-6066.cir-14-0177","title":"Cell-free Tumor Microparticle Vaccines Stimulate Dendritic Cells via cGAS/STING Signaling","year":2014,"lang":"en","type":"article","venue":"Cancer Immunology Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":140,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Huazhong University of Science and Technology","keywords":"Antigen; Immunotherapy; Dendritic cell; Immune system; Cancer research; Immunology; DNA vaccination; T cell; Innate immune system; Antigen presentation; Biology; Immunization","score_opus":0.0358350077736466,"score_gpt":0.328043116793005,"score_spread":0.2922081090193584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084785039","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9863143,0.0026558263,0.007739104,0.00022036552,0.000093777875,0.00006456745,0.0001777856,0.00013673778,0.0025974778],"genre_scores_gemma":[0.9941795,0.00084195135,0.0031640257,0.00006309115,0.000029919933,0.000029003844,0.000102161226,0.000010775255,0.0015796429],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999925,0.000015859327,0.000005579766,0.000013231819,0.000020380567,0.000019841731],"domain_scores_gemma":[0.999948,0.000013306482,0.000015948799,0.0000050880085,0.0000049465025,0.000012694253],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007103492,0.00029762514,0.00014123792,0.00016038913,0.00006364867,0.00020542917,0.00007794748,0.00024589407,0.0009905697],"category_scores_gemma":[0.00008322505,0.00007746663,0.00022268646,0.00007660969,0.00013363047,0.00019069403,0.000180986,0.0004167582,0.0003026339],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008484854,0.000028028391,0.000114093455,0.000043776574,0.000003394799,0.000043993954,0.000008862896,0.00012313454,0.99592054,0.00015947365,0.00006750016,0.003402288],"study_design_scores_gemma":[0.000025222957,0.0003318024,0.00093057303,0.000006683928,0.000013282313,0.00011997048,0.000013883433,0.0016455034,0.9946122,0.0001711202,0.002126771,0.0000029161208],"about_ca_topic_score_codex":0.00008533706,"about_ca_topic_score_gemma":0.00015596897,"teacher_disagreement_score":0.0009905697,"about_ca_system_score_codex":0.00021042091,"about_ca_system_score_gemma":0.00017086366,"threshold_uncertainty_score":0.0033137798},"labels":[],"label_agreement":null},{"id":"W2084855544","doi":"10.1016/j.dci.2007.12.008","title":"Cloning, expression and immunoassay detection of ferret IFN-γ","year":2008,"lang":"en","type":"article","venue":"Developmental & Comparative Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; University of Toronto; University Health Network","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Virology; Mustela putorius; Monoclonal antibody; Antibody; ELISPOT; Complementary DNA; Immunoassay; Interferon; Immune system; Cloning (programming); Immunology; Immunity; Innate immune system; Molecular biology; Gene; T cell","score_opus":0.03274865031369325,"score_gpt":0.263543823730192,"score_spread":0.23079517341649872,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084855544","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92477345,0.0022867294,0.06392414,0.0006027916,0.0001716243,0.00036409538,0.003563699,0.0003901432,0.0039233956],"genre_scores_gemma":[0.9032041,0.0015107705,0.061242398,0.0002283066,0.0000972531,0.00042902754,0.012641272,0.00019674427,0.020450113],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996563,0.00004725537,0.000036387704,0.00009951607,0.000071011,0.00008955818],"domain_scores_gemma":[0.99965847,0.00011816566,0.00004820037,0.0000949669,0.000046769957,0.000033540637],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004510251,0.00061773055,0.000467245,0.0005715992,0.00045021795,0.0008255293,0.00064853765,0.00055010465,0.0013784439],"category_scores_gemma":[0.00040667912,0.00036401718,0.0007655078,0.00042436973,0.00055592274,0.00042922792,0.00042095786,0.0017395108,0.0011196779],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008582104,0.000025632367,0.00020166187,0.000024774205,0.0000043417826,0.00002908153,0.00003581701,0.00008894435,0.99805707,0.00025352606,0.000046949648,0.0011463844],"study_design_scores_gemma":[0.000013953162,0.000101440724,0.0021915885,0.000009996478,0.000015658215,0.00018054951,0.000044211312,0.0006261092,0.9924805,0.00014520723,0.00418527,0.000005576149],"about_ca_topic_score_codex":0.0014346254,"about_ca_topic_score_gemma":0.0014568216,"teacher_disagreement_score":0.0014346254,"about_ca_system_score_codex":0.0008920838,"about_ca_system_score_gemma":0.00037993488,"threshold_uncertainty_score":0.0064725876},"labels":[],"label_agreement":null},{"id":"W2084880831","doi":"10.1126/science.1081315","title":"Triggering the Interferon Antiviral Response Through an IKK-Related Pathway","year":2003,"lang":"en","type":"article","venue":"Science","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1667,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital","funders":"","keywords":"Interferon; Interferon regulatory factors; IκB kinase; Kinase; Transcription factor; Cell biology; TANK-binding kinase 1; Signal transduction; Biology; Cancer research; Virology; MAP kinase kinase kinase; NF-κB; Protein kinase A; Genetics; Gene","score_opus":0.017814085516051313,"score_gpt":0.2750282078080387,"score_spread":0.2572141222919874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084880831","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92003715,0.015825521,0.02811357,0.0017221895,0.00050551293,0.00009542505,0.0004975599,0.0005852895,0.032617833],"genre_scores_gemma":[0.98627245,0.0040123602,0.0042667184,0.00024222863,0.00010465266,0.00003691762,0.00023431951,0.000025536361,0.004804819],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987245,0.000030311252,0.000008628414,0.000017769378,0.000035765454,0.000035073554],"domain_scores_gemma":[0.9999182,0.00001344801,0.000018567971,0.000012400778,0.000010724286,0.000026624522],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018291065,0.00028771083,0.00018982905,0.00018314118,0.00020151249,0.00037497538,0.00017147063,0.00023700601,0.0023209741],"category_scores_gemma":[0.00023573606,0.000100530546,0.00021120683,0.00008753655,0.00024028179,0.0004004511,0.0003567342,0.00073880336,0.001502194],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019482443,0.00004030803,0.00032124153,0.00007909756,0.000004365648,0.00024816234,0.00002002247,0.00011547744,0.9920397,0.001523458,0.00021980076,0.0051936368],"study_design_scores_gemma":[0.00013381745,0.00038386625,0.007110845,0.000058790596,0.000036127312,0.0026333334,0.000108654895,0.0025330826,0.95641416,0.0055446355,0.02502712,0.000015455815],"about_ca_topic_score_codex":0.0000651315,"about_ca_topic_score_gemma":0.000092606126,"teacher_disagreement_score":0.0023209741,"about_ca_system_score_codex":0.00036929536,"about_ca_system_score_gemma":0.00026591468,"threshold_uncertainty_score":0.0077644587},"labels":[],"label_agreement":null},{"id":"W2085015448","doi":"10.1089/dna.2011.1384","title":"Interferon-Induced Tetherin Restricts Vesicular Stomatitis Virus Release in Neurons","year":2011,"lang":"en","type":"article","venue":"DNA and Cell Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; National Institute of Neurological Disorders and Stroke; York University","keywords":"Tetherin; Biology; Vesicular stomatitis virus; Transfection; Gene knockdown; Interferon; Virology; Cell biology; Innate immune system; Antiviral protein; Molecular biology; Virus; Cell culture; Immune system; Viral replication; RNA; Gene; Immunology","score_opus":0.021531412963720666,"score_gpt":0.2224410121315415,"score_spread":0.20090959916782083,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085015448","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99576217,0.00095318,0.0016959301,0.000046649955,0.000019664758,0.000013263841,0.00015285928,0.000022597633,0.0013336368],"genre_scores_gemma":[0.99449664,0.00087091315,0.0014532887,0.000034290533,0.0000067140704,0.00003141456,0.00030102272,0.000014196739,0.0027914813],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998921,0.000011672714,0.000012130494,0.000020687727,0.000032409338,0.000030935174],"domain_scores_gemma":[0.9999248,0.000020083771,0.0000146622315,0.0000116226865,0.00001293381,0.000015850976],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008779051,0.00017301526,0.00027013355,0.00014697837,0.00013293757,0.0003161179,0.00014861215,0.00022213408,0.000811681],"category_scores_gemma":[0.00009304996,0.00010217253,0.00019781379,0.000083265775,0.00016237354,0.00020896854,0.00025107304,0.00047378027,0.00030988257],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017211147,0.0000045705715,0.00008690257,0.000013382687,0.000001433798,0.000015415897,0.000008081325,0.0000132692385,0.99947125,0.000040010287,0.000009786688,0.00031882484],"study_design_scores_gemma":[0.0000074346176,0.000096248594,0.0041562584,0.000008520467,0.000009749154,0.0000941834,0.000050617586,0.0006291493,0.9937417,0.00004969781,0.0011541398,0.0000022552736],"about_ca_topic_score_codex":0.0007000106,"about_ca_topic_score_gemma":0.00202647,"teacher_disagreement_score":0.000811681,"about_ca_system_score_codex":0.00033051803,"about_ca_system_score_gemma":0.0002587109,"threshold_uncertainty_score":0.0027152896},"labels":[],"label_agreement":null},{"id":"W2085113178","doi":"10.1016/j.cyto.2009.07.212","title":"5′-Tri-phosphorylated adenovirus viral accessory RNAs potently induce interferon in a protein kinase R-dependant manner","year":2009,"lang":"en","type":"article","venue":"Cytokine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nutrasource","funders":"","keywords":"Phosphorylation; Interferon; Cell biology; Kinase; Chemistry; Protein kinase R; Virology; Protein kinase A; Biology; Mitogen-activated protein kinase kinase","score_opus":0.01392299741161092,"score_gpt":0.2536782621360013,"score_spread":0.23975526472439038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085113178","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9831808,0.0030973668,0.0059563094,0.00014667382,0.00027710138,0.00010382219,0.00066186837,0.00024198156,0.0063340464],"genre_scores_gemma":[0.98778665,0.0010236332,0.005077941,0.00010495786,0.000078806996,0.00007444877,0.0013101298,0.000055712353,0.0044877124],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99965465,0.000062292806,0.000030489598,0.00007014771,0.00006022536,0.00012223366],"domain_scores_gemma":[0.9996152,0.00014779298,0.000054862,0.000075049415,0.000027178947,0.000079955396],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043680007,0.0007999106,0.00033779984,0.00034765754,0.00020398576,0.00052041706,0.00021761186,0.00028664246,0.0018545107],"category_scores_gemma":[0.00025195698,0.00023940913,0.00048020887,0.00020167838,0.00029170222,0.00025201295,0.00027300938,0.0009339098,0.0009202689],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002767669,0.00004131481,0.00008468828,0.000020719384,0.000004547358,0.000035196357,0.000008486425,0.00003807547,0.9985708,0.00010880425,0.00005007361,0.00076062756],"study_design_scores_gemma":[0.000032549262,0.00031351182,0.0019032633,0.0000045690754,0.000012889963,0.00018182192,0.000020130658,0.00044263803,0.9954881,0.00005660992,0.0015398132,0.000004039639],"about_ca_topic_score_codex":0.00042594323,"about_ca_topic_score_gemma":0.00077118806,"teacher_disagreement_score":0.0018545107,"about_ca_system_score_codex":0.00047921113,"about_ca_system_score_gemma":0.0003437372,"threshold_uncertainty_score":0.0062039495},"labels":[],"label_agreement":null},{"id":"W2085459501","doi":"10.1074/jbc.r700002200","title":"Triggering the Innate Antiviral Response through IRF-3 Activation","year":2007,"lang":"en","type":"review","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":457,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Interferon regulatory factors; Interferon; Innate immune system; Biology; Transcription factor; IRF1; Interferon type I; Toll-like receptor; Pattern recognition receptor; Immunology; Cell biology; Signal transduction; Immune system; Gene; Genetics","score_opus":0.09237902038286241,"score_gpt":0.3580520360409749,"score_spread":0.2656730156581125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085459501","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.79551524,0.03785382,0.097849384,0.004055614,0.0019093291,0.00045300077,0.0038843295,0.0028020097,0.05567726],"genre_scores_gemma":[0.9707545,0.0069042835,0.011008358,0.000912487,0.00012999198,0.00014760593,0.0014760474,0.00006472455,0.008602056],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99962234,0.00006984866,0.000018682944,0.00006204451,0.00009948612,0.00012753249],"domain_scores_gemma":[0.9998723,0.000017644787,0.00003811201,0.000015346615,0.00003198247,0.000024581092],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003424387,0.00047841624,0.0002734363,0.0002820833,0.0003052782,0.0005172421,0.00028424113,0.0006526607,0.0063901856],"category_scores_gemma":[0.00026346228,0.00019566742,0.00092092063,0.00015342832,0.00028760167,0.00039400242,0.00069756695,0.0013956532,0.0029376182],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027282463,0.000066921064,0.0010604438,0.00034047122,0.000031296702,0.00028731482,0.00005532413,0.00030707428,0.977411,0.0021118748,0.0021437793,0.015911596],"study_design_scores_gemma":[0.00017731114,0.0005476482,0.011813525,0.00020742785,0.00010263332,0.0023515339,0.00023641296,0.0050816755,0.8774209,0.0049849674,0.097012185,0.000063805535],"about_ca_topic_score_codex":0.00036516643,"about_ca_topic_score_gemma":0.00038160954,"teacher_disagreement_score":0.0063901856,"about_ca_system_score_codex":0.0004974754,"about_ca_system_score_gemma":0.00041998105,"threshold_uncertainty_score":0.021377325},"labels":[],"label_agreement":null},{"id":"W2085620355","doi":"10.1002/ajmg.b.10656","title":"Spectrum of dolichospondylic dysplasia: Two new patients with distinctive findings","year":2002,"lang":"en","type":"article","venue":"American Journal of Medical Genetics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Credit Valley Hospital","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of General Medical Sciences","keywords":"Short stature; Frontal Bossing; Hypoplasia; Anatomy; Dysplasia; Medicine; Nose; Pathology; Internal medicine","score_opus":0.0069362789677951025,"score_gpt":0.23517691159735477,"score_spread":0.22824063262955965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085620355","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99533516,0.00051535136,0.00085851,0.00033625748,0.00005765778,0.00009214065,0.00019906709,0.0000565511,0.0025493493],"genre_scores_gemma":[0.99699616,0.00027001166,0.0010320263,0.0004135903,0.00013538457,0.000058720474,0.0002515617,0.000020612235,0.00082194735],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9992618,0.00007506554,0.00009218895,0.00022911793,0.00016712729,0.00017468848],"domain_scores_gemma":[0.9989236,0.00026288754,0.00015958717,0.000065830405,0.00010256036,0.00048560507],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031213844,0.002257555,0.0011173275,0.0019580063,0.0015264511,0.0009963575,0.00088420184,0.0021494841,0.0023594205],"category_scores_gemma":[0.0027397992,0.0010917594,0.0007917997,0.000838437,0.0014211627,0.0009446888,0.0018157044,0.001426982,0.00052870763],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003046854,0.00043581054,0.13134085,0.00008315349,0.000063041465,0.83763343,0.002685942,0.00030280818,0.0121650705,0.00093575084,0.0012540958,0.012795327],"study_design_scores_gemma":[0.00010026362,0.00030508696,0.06200672,0.000021308791,0.000028219523,0.9346125,0.00030236828,0.00026025684,0.0006395053,0.0003039381,0.0013674404,0.000052448053],"about_ca_topic_score_codex":0.0021533445,"about_ca_topic_score_gemma":0.0022892067,"teacher_disagreement_score":0.0023594205,"about_ca_system_score_codex":0.0007915911,"about_ca_system_score_gemma":0.0004486927,"threshold_uncertainty_score":0.007893026},"labels":[],"label_agreement":null},{"id":"W2086004955","doi":"10.1016/j.molcel.2012.12.015","title":"tRNA Binding, Structure, and Localization of the Human Interferon-Induced Protein IFIT5","year":2013,"lang":"en","type":"article","venue":"Molecular Cell","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":82,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Lawrence Berkeley National Laboratory; National Institute of General Medical Sciences; National Heart, Lung, and Blood Institute; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Tetratricopeptide; Biology; RNA; RNA-binding protein; Cell biology; Plasma protein binding; Interferon; Transfer RNA; Cytoplasm; Molecular biology; Biochemistry; Gene; Genetics","score_opus":0.006662931457120345,"score_gpt":0.20945470394991655,"score_spread":0.2027917724927962,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2086004955","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966427,0.0011805837,0.0008146167,0.00008199275,0.000012660862,0.0000026916996,0.0001255161,0.00001527946,0.0011239464],"genre_scores_gemma":[0.9974617,0.00017093553,0.0005015099,0.00003372388,0.0000041373123,0.0000022054792,0.00048264433,0.000008873954,0.00133431],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999912,0.000015889278,0.0000046515006,0.000020399375,0.000024727919,0.000022301921],"domain_scores_gemma":[0.99993694,0.000017253129,0.000013613496,0.0000069545263,0.0000076086953,0.00001767031],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000097963944,0.00011390951,0.000154707,0.00014033205,0.00034050384,0.0003070728,0.0001872153,0.00028688362,0.0016811938],"category_scores_gemma":[0.00027092954,0.00011142037,0.00017264084,0.0001247686,0.00016838762,0.00019437876,0.00015438635,0.00028759512,0.00050594535],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038920398,0.000016537491,0.0010985396,0.000024395698,0.000005687377,0.00007932306,0.000028929197,0.00020277692,0.99522746,0.00048620393,0.00014392055,0.0022970308],"study_design_scores_gemma":[0.000039679253,0.00018374501,0.07214831,0.000019923345,0.000016504468,0.00053965324,0.00018417448,0.007830424,0.91260165,0.00043861262,0.005979003,0.000018202487],"about_ca_topic_score_codex":0.00212866,"about_ca_topic_score_gemma":0.0032160562,"teacher_disagreement_score":0.00212866,"about_ca_system_score_codex":0.0005256139,"about_ca_system_score_gemma":0.00019853542,"threshold_uncertainty_score":0.005624175},"labels":[],"label_agreement":null},{"id":"W2086678732","doi":"10.1074/jbc.m110.183616","title":"Smac Mimetic Compounds Potentiate Interleukin-1β-mediated Cell Death","year":2010,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Children's Hospital of Eastern Ontario","funders":"Canadian Institutes of Health Research; University of Ottawa; Howard Hughes Medical Institute","keywords":"Apoptosis; Programmed cell death; Tumor necrosis factor alpha; Cancer cell; Cancer research; Cell biology; Inhibitor of apoptosis; Tumor microenvironment; Proinflammatory cytokine; Biology; Flip; Ectopic expression; Cell culture; Chemistry; Cancer; Immunology; Inflammation; Biochemistry; Tumor cells","score_opus":0.014723768756177555,"score_gpt":0.23680519868796582,"score_spread":0.22208142993178825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2086678732","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899877,0.005030684,0.0020361615,0.00011471074,0.000065244494,0.00008393377,0.00020519199,0.00007274684,0.0024036537],"genre_scores_gemma":[0.9939557,0.002696858,0.0017019704,0.000078146324,0.000032881646,0.00006289937,0.00030124717,0.00000744881,0.0011628504],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998555,0.00003990523,0.000016676035,0.000013119876,0.000037252423,0.000037459475],"domain_scores_gemma":[0.9999112,0.000021027343,0.000023400095,0.000010679915,0.0000150420465,0.0000187187],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021608021,0.0004268208,0.00036419026,0.00029539134,0.00010985887,0.00017168758,0.000080034864,0.0001901622,0.0009914667],"category_scores_gemma":[0.00012250357,0.000089122055,0.00019980874,0.00013870039,0.00014059617,0.00012295283,0.00014187042,0.00046646438,0.00025819588],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015938116,0.00007526967,0.00014661724,0.00007123604,0.000008530403,0.000047920297,0.000013336462,0.00008437444,0.99630016,0.0000684106,0.00006269728,0.0029620733],"study_design_scores_gemma":[0.000048853435,0.0016924114,0.0020603589,0.000009505362,0.000023317109,0.0002333654,0.0000106046655,0.0003644424,0.99283844,0.00003322016,0.002682918,0.0000025299003],"about_ca_topic_score_codex":0.00010171234,"about_ca_topic_score_gemma":0.00025653248,"teacher_disagreement_score":0.0009914667,"about_ca_system_score_codex":0.00012748026,"about_ca_system_score_gemma":0.00013268023,"threshold_uncertainty_score":0.00331676},"labels":[],"label_agreement":null},{"id":"W2086753545","doi":"10.1016/j.cyto.2008.07.021","title":"Key-1 Translational control of innate immunity via IRF-7","year":2008,"lang":"en","type":"article","venue":"Cytokine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Innate immune system; Key (lock); Immunity; Biology; Computer science; Immunology; Immune system; Computer security","score_opus":0.01402959737624622,"score_gpt":0.23037235634142775,"score_spread":0.21634275896518151,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2086753545","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88649476,0.02164897,0.039450526,0.004859723,0.0023390583,0.0001773007,0.0034964557,0.0013747271,0.040158533],"genre_scores_gemma":[0.9694696,0.002627146,0.008128318,0.00045775567,0.00033827772,0.00007254497,0.0021181575,0.00017124682,0.016617078],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99953306,0.00008013554,0.000027591419,0.00009029338,0.0000910559,0.00017782915],"domain_scores_gemma":[0.9997873,0.000030665997,0.000049689315,0.000043276108,0.000041857085,0.000047281577],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005579157,0.00080464623,0.00040827194,0.0004146336,0.0006617763,0.0009249807,0.0004833837,0.00053877203,0.011079357],"category_scores_gemma":[0.0003486375,0.00025363304,0.0007806275,0.00018293121,0.00048403037,0.0008220687,0.00069730973,0.0020600704,0.003765748],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008193196,0.000096386684,0.00047774907,0.00013448173,0.000015026884,0.00021596192,0.000051901396,0.00016790957,0.9816149,0.0049288934,0.0013506035,0.010126871],"study_design_scores_gemma":[0.00010604137,0.00039894608,0.009852372,0.00006865173,0.000042468782,0.0008103146,0.00023169938,0.0019944527,0.96099454,0.0035729168,0.021905134,0.00002231409],"about_ca_topic_score_codex":0.00019742864,"about_ca_topic_score_gemma":0.0003886038,"teacher_disagreement_score":0.011079357,"about_ca_system_score_codex":0.0007211946,"about_ca_system_score_gemma":0.0004717701,"threshold_uncertainty_score":0.037064195},"labels":[],"label_agreement":null},{"id":"W2087852682","doi":"10.1371/journal.pone.0086968","title":"Activation of Duck RIG-I by TRIM25 Is Independent of Anchored Ubiquitin","year":2014,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"RIG-I; Ubiquitin; Biology; Ubiquitin ligase; Innate immune system; Cell biology; MDA5; Signal transducing adaptor protein; Interferon; Signal transduction; Gene; Genetics; RNA; Immune system; RNA interference","score_opus":0.022908490895045822,"score_gpt":0.22303062432491985,"score_spread":0.20012213342987403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2087852682","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99643683,0.0006347445,0.0010412792,0.000047592104,0.000012722813,0.000011918274,0.00037963194,0.000033228636,0.0014021135],"genre_scores_gemma":[0.99459994,0.0002566512,0.0010521014,0.000028196775,0.0000026554471,0.000009598795,0.000752456,0.0000074127993,0.003290979],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983597,0.0000181399,0.000015502656,0.000047384812,0.00003728393,0.000045648736],"domain_scores_gemma":[0.99991,0.000010100127,0.000024906964,0.000023008914,0.000010792756,0.000021158836],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009726888,0.00022721574,0.00014776757,0.000114791525,0.00019136233,0.00033988585,0.00017228106,0.00020136136,0.0013559808],"category_scores_gemma":[0.00008228644,0.00011012968,0.00033112676,0.00012329507,0.00020267443,0.00017922251,0.00018661344,0.00032878073,0.0006008653],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009967553,0.000014541058,0.0004764625,0.000026131505,0.0000068887443,0.000091142276,0.000020590935,0.000050163184,0.99844897,0.00011421559,0.000033670036,0.0006175154],"study_design_scores_gemma":[0.000010174725,0.000092349204,0.012107222,0.0000073250717,0.000010094042,0.00046063456,0.000056086654,0.0012076898,0.98305327,0.00005444832,0.0029342892,0.0000064020564],"about_ca_topic_score_codex":0.0013690399,"about_ca_topic_score_gemma":0.0018388736,"teacher_disagreement_score":0.0013690399,"about_ca_system_score_codex":0.0006489361,"about_ca_system_score_gemma":0.00018809598,"threshold_uncertainty_score":0.0047083497},"labels":[],"label_agreement":null},{"id":"W2088068141","doi":"10.1158/1538-7445.am10-1646","title":"Abstract 1646: Molecular pathways associated with Reolysin and gemcitabine synergy in ras-mutated human HCT116 cells","year":2010,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Oncolytics Biotech (Canada)","funders":"","keywords":"Oncolytic virus; In vivo; Gene; Cell culture; In vitro; Gene expression; Cancer research; Biology; RNA interference; Interferon; Molecular biology; RNA; Virology; Virus; Biochemistry; Genetics","score_opus":0.029033854739396056,"score_gpt":0.3275619576715728,"score_spread":0.29852810293217674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088068141","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9810239,0.0047964132,0.0033088923,0.00032390814,0.00007951423,0.000102083904,0.0068660486,0.0002147421,0.0032844138],"genre_scores_gemma":[0.97963107,0.0021863838,0.004475722,0.0001772259,0.000019008769,0.00017547516,0.006312998,0.00003195902,0.006990152],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984336,0.000025265797,0.0000141281325,0.00003458448,0.000050580365,0.000032053053],"domain_scores_gemma":[0.99994195,0.000009809673,0.000016764976,0.0000057831994,0.000012300238,0.000013368728],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009679486,0.00040558403,0.0004141181,0.0003925779,0.00021767784,0.00028834268,0.00009878194,0.0002274453,0.0019175741],"category_scores_gemma":[0.00009174579,0.000108670145,0.00036533584,0.0005057303,0.00012218088,0.0001846185,0.00015594623,0.00037889174,0.0005448774],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026456112,0.000030455081,0.00031526212,0.00008167617,0.000005799652,0.000062710424,0.00001593309,0.00007593014,0.9977919,0.000033854034,0.00009768601,0.0012242636],"study_design_scores_gemma":[0.000026467194,0.0005005453,0.03765018,0.000015403353,0.000030148698,0.00023116061,0.00007435619,0.0009413206,0.9564878,0.000072284834,0.0039610313,0.000009310088],"about_ca_topic_score_codex":0.0006910744,"about_ca_topic_score_gemma":0.00083949877,"teacher_disagreement_score":0.0019175741,"about_ca_system_score_codex":0.0003051918,"about_ca_system_score_gemma":0.00023274674,"threshold_uncertainty_score":0.0064148903},"labels":[],"label_agreement":null},{"id":"W2088943364","doi":"10.1016/j.abb.2007.07.006","title":"Selectivity in ISG15 and ubiquitin recognition by the SARS coronavirus papain-like protease","year":2007,"lang":"en","type":"article","venue":"Archives of Biochemistry and Biophysics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":167,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"ISG15; Deubiquitinating enzyme; Ubiquitin; Protease; Coronavirus; Biochemistry; Chemistry; Biology; Gene; Enzyme; Virology; Coronavirus disease 2019 (COVID-19)","score_opus":0.012388348224638843,"score_gpt":0.2447657750445272,"score_spread":0.23237742681988838,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088943364","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970739,0.00053512695,0.00065508625,0.00008006831,0.00001601189,0.00000530796,0.00002952729,0.000013170985,0.0015918225],"genre_scores_gemma":[0.99895763,0.00008548782,0.00022634408,0.000060856273,0.000003955926,0.0000019026338,0.000058540703,0.0000039225474,0.0006013655],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99971753,0.000055169738,0.000016139758,0.00004476456,0.00005969562,0.00010667633],"domain_scores_gemma":[0.99981004,0.000042825508,0.000029600356,0.000024472203,0.000037359736,0.000055779034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048538644,0.0001514609,0.00026684933,0.00016884068,0.00022810245,0.0005077232,0.0002730979,0.00033860994,0.0019410168],"category_scores_gemma":[0.00029226174,0.00014141998,0.00020748666,0.00010849993,0.00025896312,0.00033627695,0.00027205423,0.0002999842,0.00060086476],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007180002,0.000025951314,0.0040184585,0.000040114377,0.000021320844,0.0001759849,0.00005492144,0.00021963901,0.9882401,0.0014561507,0.00018245011,0.0048469016],"study_design_scores_gemma":[0.00007199214,0.0004114249,0.021552807,0.000011153097,0.000032137727,0.0017191598,0.00014286656,0.0031098553,0.9696549,0.0005685157,0.0027124847,0.000012701805],"about_ca_topic_score_codex":0.00045837756,"about_ca_topic_score_gemma":0.0005593094,"teacher_disagreement_score":0.0019410168,"about_ca_system_score_codex":0.0004507371,"about_ca_system_score_gemma":0.00021860651,"threshold_uncertainty_score":0.0064933896},"labels":[],"label_agreement":null},{"id":"W2089107286","doi":"10.1007/s11481-012-9360-5","title":"Anti-Viral and Anti-Inflammatory Mechanisms of the Innate Immune Transcription Factor Interferon Regulatory Factor 3: Relevance to Human CNS Diseases","year":2012,"lang":"en","type":"review","venue":"Journal of Neuroimmune Pharmacology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institute of Neurological Disorders and Stroke; National Institute of Mental Health; National Institutes of Health; McGill University","keywords":"IRF3; Interferon regulatory factors; Biology; Transcription factor; Interferon; Proinflammatory cytokine; Innate immune system; Cell biology; Immune system; Immunology; Inflammation; Gene; Biochemistry","score_opus":0.03839222230512548,"score_gpt":0.3192278140124718,"score_spread":0.28083559170734634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089107286","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001464238,0.998439,0.00022336995,0.00020693816,0.00028713836,0.0000039986026,0.00001586705,0.000006790005,0.0006703358],"genre_scores_gemma":[0.00075115677,0.9977901,0.00030795851,0.00016825688,0.00036714098,0.0000056185368,0.000031732823,0.0000015826862,0.0005764124],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998623,0.000017347895,0.000019649997,0.000026288586,0.00005809379,0.000016264914],"domain_scores_gemma":[0.999731,0.00010952871,0.000048873768,0.000008286633,0.0000655332,0.00003676724],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006327583,0.001022758,0.001305629,0.0013009618,0.0002140581,0.00086145784,0.00094325066,0.00097579986,0.002179683],"category_scores_gemma":[0.00051415374,0.00026363993,0.0003523516,0.0013639104,0.0005870048,0.0011052828,0.00061774947,0.0018678593,0.0019001339],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014323737,0.00005847412,0.00015870693,0.006728197,0.00004916577,0.00022335423,0.00003142288,0.0003320558,0.00472435,0.0022881485,0.023204366,0.96205854],"study_design_scores_gemma":[0.000042301737,0.00010722706,0.0010450991,0.0013406803,0.000088719724,0.0015472735,0.00004751388,0.00012973361,0.001159506,0.001999941,0.9924661,0.00002591885],"about_ca_topic_score_codex":0.00066083437,"about_ca_topic_score_gemma":0.0013554494,"teacher_disagreement_score":0.002179683,"about_ca_system_score_codex":0.00053330895,"about_ca_system_score_gemma":0.00086918235,"threshold_uncertainty_score":0.007291734},"labels":[],"label_agreement":null},{"id":"W2091006367","doi":"10.1111/imm.12038","title":"Recent advances in understanding viral evasion of type I interferon","year":2012,"lang":"en","type":"review","venue":"Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":171,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"","keywords":"Biology; Interferon regulatory factors; IRF7; Interferon; Transcription factor; IRF3; STAT1; Receptor; Cell biology; Interferon type I; IRF1; Signal transduction; Virology; Genetics; Gene","score_opus":0.09941055840287324,"score_gpt":0.35166000575188394,"score_spread":0.25224944734901067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091006367","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00020022456,0.99759054,0.00033977383,0.00026005055,0.0002831955,0.0000031674854,0.000008943275,0.000011299258,0.001302757],"genre_scores_gemma":[0.0008859291,0.997396,0.00044094506,0.00018005403,0.00033492842,0.000004263958,0.00002367733,0.0000020540297,0.00073208206],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99985814,0.00001988139,0.000017665885,0.000029994935,0.000055778313,0.000018500697],"domain_scores_gemma":[0.99972385,0.00010667304,0.00003962505,0.000010384517,0.00007644852,0.000043122665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005333137,0.0009280616,0.0009251072,0.001294606,0.00024262229,0.0008262753,0.00064538256,0.00096777175,0.0030235238],"category_scores_gemma":[0.0004734432,0.00025097348,0.00032524014,0.0014448294,0.0004933707,0.0014216229,0.000743298,0.0016754614,0.0024186657],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007568905,0.0000683849,0.0001698114,0.010262888,0.000043223372,0.00018834809,0.00006010948,0.0003190149,0.007819784,0.004264867,0.017778857,0.9589489],"study_design_scores_gemma":[0.000011280047,0.00007946779,0.00078140054,0.001121956,0.000059105987,0.0011135759,0.000053602358,0.00011217234,0.0018485532,0.002257861,0.99254084,0.00002014537],"about_ca_topic_score_codex":0.0006295656,"about_ca_topic_score_gemma":0.00079362775,"teacher_disagreement_score":0.0030235238,"about_ca_system_score_codex":0.0006040291,"about_ca_system_score_gemma":0.00073567795,"threshold_uncertainty_score":0.010114729},"labels":[],"label_agreement":null},{"id":"W2091596699","doi":"10.1242/jcs.051193","title":"An N-terminal addressing sequence targets NLRX1 to the mitochondrial matrix","year":2009,"lang":"en","type":"article","venue":"Journal of Cell Science","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":201,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"Canadian Institutes of Health Research; University of Toronto; Ligue Contre le Cancer; Agence Nationale de la Recherche; Fondation pour la Recherche Médicale; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Biology; Mitochondrion; Cell biology; Mitochondrial matrix; Inner mitochondrial membrane; Bacterial outer membrane; Biochemistry; Cytosol; Gene; Enzyme","score_opus":0.024066598632673356,"score_gpt":0.33153923550675163,"score_spread":0.3074726368740783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091596699","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98682946,0.00095205713,0.009717574,0.0003023879,0.00007987236,0.000051618626,0.00028020446,0.000072399576,0.0017143649],"genre_scores_gemma":[0.9788275,0.00086376135,0.01396745,0.00025414428,0.00004042286,0.000053952303,0.0013719663,0.000036889138,0.0045839604],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998915,0.000028957727,0.0000119010465,0.000024112345,0.000024134317,0.000019342671],"domain_scores_gemma":[0.99981123,0.000046158784,0.00005578559,0.000024581303,0.000026080832,0.000036195426],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012706508,0.00034944192,0.00020918982,0.00008544487,0.00018311988,0.00022798896,0.00019389509,0.0004295476,0.0017599761],"category_scores_gemma":[0.00023548875,0.00009388591,0.00022781186,0.0000984313,0.00021732095,0.00019912254,0.00019394243,0.0006868751,0.000943164],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054786153,0.000012012674,0.00007428262,0.00002033103,0.0000020942455,0.000059382528,0.0000107839805,0.000027866825,0.998835,0.000087224835,0.000030762916,0.00078542565],"study_design_scores_gemma":[0.000020581208,0.00018494476,0.0015242047,0.000008195146,0.000012594894,0.0005599765,0.000028161401,0.00072097,0.99201256,0.000060300656,0.004863293,0.0000041182557],"about_ca_topic_score_codex":0.00018102342,"about_ca_topic_score_gemma":0.00020469596,"teacher_disagreement_score":0.0017599761,"about_ca_system_score_codex":0.0002857268,"about_ca_system_score_gemma":0.00019195514,"threshold_uncertainty_score":0.005887687},"labels":[],"label_agreement":null},{"id":"W2092333125","doi":"10.1097/00001432-200206000-00008","title":"The interferon antiviral response: from viral invasion to evasion","year":2002,"lang":"en","type":"review","venue":"Current Opinion in Infectious Diseases","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":215,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; HEC Montréal; Terry Fox Research Institute","funders":"Jewish General Hospital; McGill University","keywords":"Interferon; Virus; Chemokine; Proinflammatory cytokine; Immune system; Viral replication; Virology; Biology; Immunology; Inflammation","score_opus":0.05784927046915499,"score_gpt":0.3588593064339954,"score_spread":0.3010100359648404,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092333125","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0007747846,0.9934917,0.00070798857,0.0006936449,0.0004988029,0.00000917554,0.0000149315565,0.000023213861,0.003785768],"genre_scores_gemma":[0.0058160685,0.9878736,0.00072725053,0.00060209,0.00060300285,0.000021406559,0.000035037032,0.00000443332,0.004317068],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99986637,0.00002400022,0.00001256629,0.00002954308,0.0000494034,0.000018215585],"domain_scores_gemma":[0.9999143,0.000020416646,0.000017529659,0.0000038028957,0.000023129202,0.000020821433],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003555169,0.00078635465,0.0012144886,0.00082644506,0.00029514587,0.0010812763,0.000813634,0.0013814245,0.0018445415],"category_scores_gemma":[0.00019378973,0.0001778711,0.00020423216,0.0007799734,0.0006372839,0.0010896864,0.00046972747,0.0012556727,0.0025811829],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013005179,0.000049581053,0.0002765267,0.006206096,0.000034572116,0.00068158325,0.00017947456,0.0003032519,0.034397855,0.014120154,0.02125432,0.9223665],"study_design_scores_gemma":[0.000024394683,0.00011678556,0.0015308608,0.0013163773,0.000023791636,0.0026529646,0.00013732724,0.00013912037,0.005982492,0.006867185,0.98119235,0.00001625664],"about_ca_topic_score_codex":0.0003198006,"about_ca_topic_score_gemma":0.00033760283,"teacher_disagreement_score":0.0018445415,"about_ca_system_score_codex":0.00081151986,"about_ca_system_score_gemma":0.0005628201,"threshold_uncertainty_score":0.0061706305},"labels":[],"label_agreement":null},{"id":"W2092585655","doi":"10.1073/pnas.1407068111","title":"Type-I interferon signaling through ISGF3 complex is required for sustained Rip3 activation and necroptosis in macrophages","year":2014,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":195,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; University of Ottawa","funders":"Canadian Institutes of Health Research; Genentech","keywords":"Necroptosis; Programmed cell death; Immune system; Inflammation; Interferon; Biology; Immunology; Cell biology; Regulator; Cell type; Cell; Apoptosis; Biochemistry","score_opus":0.057532052209132115,"score_gpt":0.3276299622242654,"score_spread":0.2700979100151333,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092585655","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99468887,0.0010365724,0.001999831,0.00019030759,0.00004002405,0.000029361247,0.00061235426,0.000106570405,0.0012960617],"genre_scores_gemma":[0.99560696,0.0003242523,0.0010734869,0.00009250739,0.000011312563,0.00005064503,0.001380777,0.000022925064,0.0014371296],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983203,0.000020495689,0.000015613428,0.000025104757,0.00003857203,0.0000681644],"domain_scores_gemma":[0.9998716,0.000009998232,0.000040998693,0.000018079167,0.000019498379,0.00003972138],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015495977,0.00027279134,0.00023219128,0.00018228072,0.00029091514,0.00029033463,0.00017395252,0.00030290725,0.0015264271],"category_scores_gemma":[0.00013740036,0.00013145579,0.0003648138,0.00012819422,0.00020799729,0.00017806455,0.00031276996,0.00057009724,0.0009878235],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012322438,0.000011317139,0.00031739473,0.000018200177,0.0000030280964,0.00008573177,0.000009902759,0.000020817113,0.9989681,0.000053022515,0.00006615974,0.00032313756],"study_design_scores_gemma":[0.00009201169,0.00025561973,0.03829307,0.000029146857,0.000028894478,0.0014693735,0.0001521467,0.0017882708,0.95200473,0.00038703473,0.0054825656,0.00001710957],"about_ca_topic_score_codex":0.00068897073,"about_ca_topic_score_gemma":0.00096232677,"teacher_disagreement_score":0.0015264271,"about_ca_system_score_codex":0.00043850456,"about_ca_system_score_gemma":0.00039126366,"threshold_uncertainty_score":0.0051063895},"labels":[],"label_agreement":null},{"id":"W2092733059","doi":"10.1016/j.biocel.2013.05.012","title":"MAVS-mediated host cell defense is inhibited by Borna disease virus","year":2013,"lang":"en","type":"article","venue":"The International Journal of Biochemistry & Cell Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Infection and Immunity; National Natural Science Foundation of China; Medical Research Council; State Government of Victoria; Australian Government","keywords":"Interferon; Biology; RNA interference; Innate immune system; Virology; Programmed cell death; Cell biology; Viral replication; Apoptosis; RNA virus; Virus; RNA; Immune system; Immunology; Gene; Genetics","score_opus":0.004673676875699449,"score_gpt":0.21406895566765083,"score_spread":0.20939527879195138,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092733059","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957216,0.0018028999,0.00085760537,0.00009377606,0.000051155723,0.000009175329,0.00010786623,0.000055673612,0.0013002214],"genre_scores_gemma":[0.9979488,0.00032337205,0.00033883218,0.000026134638,0.000012125972,0.000012080079,0.00020481809,0.000011044151,0.0011227897],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997404,0.000057672994,0.00001846262,0.000025186817,0.0000462364,0.00011205607],"domain_scores_gemma":[0.99981254,0.000056902103,0.000031325708,0.000037411242,0.000014492534,0.000047330865],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017366448,0.00041378368,0.0003204366,0.00023878974,0.00020545365,0.00050957163,0.00036959015,0.00035906577,0.0009777648],"category_scores_gemma":[0.00024171584,0.00019282833,0.00033508617,0.000096092146,0.00042580458,0.00027064167,0.0003173354,0.000797412,0.00037582265],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020192983,0.000019637511,0.00018200786,0.000015202924,0.000005278252,0.000049578794,0.000009143349,0.000034182805,0.9987563,0.00019947566,0.000023953235,0.0005033693],"study_design_scores_gemma":[0.00003574795,0.0002281932,0.0077597895,0.000006724045,0.00001542732,0.0003056945,0.000043657805,0.0014905098,0.98780686,0.00024308398,0.0020570848,0.0000072342946],"about_ca_topic_score_codex":0.00064050953,"about_ca_topic_score_gemma":0.00065801287,"teacher_disagreement_score":0.0009777648,"about_ca_system_score_codex":0.00043343686,"about_ca_system_score_gemma":0.00023626281,"threshold_uncertainty_score":0.003270924},"labels":[],"label_agreement":null},{"id":"W2092946093","doi":"10.1038/ni1132","title":"Disruption of Erk-dependent type I interferon induction breaks the myxoma virus species barrier","year":2004,"lang":"en","type":"article","venue":"Nature Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":182,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research","keywords":"Myxoma virus; Interferon; STAT1; Biology; MAPK/ERK pathway; Interferon regulatory factors; Virus; Myxoma; Transcription factor; Innate immune system; Virology; Signal transduction; Cell biology; Immunology; Immune system; Medicine; Genetics","score_opus":0.00911822760150331,"score_gpt":0.2510064613649729,"score_spread":0.2418882337634696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092946093","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923693,0.0010026181,0.0039097876,0.000545212,0.000085448904,0.000017287832,0.00011958606,0.0000904327,0.0018602965],"genre_scores_gemma":[0.9977034,0.0001858465,0.0010726218,0.00006540452,0.000010263324,0.00001024701,0.00007146084,0.000013533048,0.0008674538],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998462,0.000032152522,0.000012476097,0.000021880285,0.000032773165,0.000054474545],"domain_scores_gemma":[0.99983764,0.00003828244,0.000050290233,0.000031108862,0.0000093081,0.000033371947],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022052077,0.00021992256,0.00018065289,0.00013853147,0.00017306939,0.0003449012,0.00021955339,0.00034847253,0.001179151],"category_scores_gemma":[0.00019529575,0.00014223425,0.00023555834,0.000045354856,0.00027833597,0.00032272498,0.00027997943,0.0010480908,0.0002947002],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001268856,0.00001904734,0.00008039682,0.000016496411,0.000003237944,0.00003574736,0.000007874559,0.000038698847,0.99811697,0.0006146185,0.00004342211,0.0008966836],"study_design_scores_gemma":[0.00003020384,0.000121468336,0.003972722,0.000008442306,0.00000731749,0.00041020694,0.000038517297,0.0013317,0.9904027,0.00059277413,0.0030780765,0.000005769894],"about_ca_topic_score_codex":0.00011835199,"about_ca_topic_score_gemma":0.0001987142,"teacher_disagreement_score":0.001179151,"about_ca_system_score_codex":0.0002572636,"about_ca_system_score_gemma":0.00014051763,"threshold_uncertainty_score":0.003944695},"labels":[],"label_agreement":null},{"id":"W2093336713","doi":"10.1128/jvi.06713-11","title":"Herpes Simplex Virus 1 Tegument Protein US11 Downmodulates the RLR Signaling Pathway via Direct Interaction with RIG-I and MDA-5","year":2012,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":174,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre; McGill University; McMaster University; Terry Fox Research Institute","funders":"","keywords":"Biology; Viral tegument; Herpes simplex virus; Sendai virus; Virology; Vesicular stomatitis virus; IRF3; Interferon; Viral replication; Immunoprecipitation; Virus; Cell biology; Immune system; Molecular biology; Innate immune system; Gene; Biochemistry; Immunology","score_opus":0.010796077984932406,"score_gpt":0.23480169868435916,"score_spread":0.22400562069942676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093336713","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936957,0.0027110311,0.0017075657,0.00010870698,0.000051953502,0.000022620654,0.00020091624,0.00009078107,0.0014107255],"genre_scores_gemma":[0.99544996,0.0013280843,0.0007984301,0.00005883104,0.0000113958495,0.000032261723,0.00043488247,0.00001596529,0.0018701317],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985325,0.000033261324,0.000018002356,0.000019404193,0.00003329192,0.00004277899],"domain_scores_gemma":[0.9999448,0.000009761807,0.000017037155,0.000007725378,0.000006100318,0.000014602144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001058773,0.00040345461,0.000251594,0.00019249805,0.000116005256,0.000283442,0.00020517115,0.00018063548,0.0013155781],"category_scores_gemma":[0.00008774774,0.00012499497,0.0003031829,0.000106707004,0.00022117268,0.00020354998,0.00017662637,0.00055585307,0.00033039108],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021168443,0.000052023977,0.00015629767,0.00005508259,0.000009584982,0.000032934473,0.000011255611,0.000065900334,0.9978509,0.00012164479,0.000065258915,0.0013674356],"study_design_scores_gemma":[0.00001953541,0.00029514125,0.0031839253,0.0000073662163,0.000029954197,0.00011939622,0.000031369822,0.0008604336,0.99273384,0.000033186006,0.002681382,0.0000045205184],"about_ca_topic_score_codex":0.000550524,"about_ca_topic_score_gemma":0.0006175452,"teacher_disagreement_score":0.0013155781,"about_ca_system_score_codex":0.00025991147,"about_ca_system_score_gemma":0.00022851626,"threshold_uncertainty_score":0.004401028},"labels":[],"label_agreement":null},{"id":"W2093460601","doi":"10.1016/j.molimm.2008.10.010","title":"Characterization of the interferon regulatory factor 3-mediated antiviral response in a cell line deficient for IFN production","year":2008,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":66,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Vero cell; Interferon; Innate immune system; Biology; Virology; Interferon regulatory factors; Cell culture; Virus; Cell biology; Immune system; Immunology; Genetics","score_opus":0.010721045121952696,"score_gpt":0.2167386530988924,"score_spread":0.2060176079769397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093460601","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.989461,0.00057964696,0.006512977,0.00018400853,0.00007331538,0.000056884688,0.0018943535,0.00013549499,0.0011022433],"genre_scores_gemma":[0.98789215,0.00037832768,0.0051085004,0.000095819014,0.00002612665,0.00009316495,0.0035226692,0.00010882347,0.0027744363],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99965966,0.00006149509,0.000048582915,0.00005373112,0.00009678623,0.00007971865],"domain_scores_gemma":[0.9992725,0.0003423087,0.00009505343,0.00014606983,0.000059867176,0.000084179024],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003931344,0.0006920093,0.0006243748,0.0005111003,0.0003496127,0.00074254425,0.00049748464,0.0005506121,0.0016063268],"category_scores_gemma":[0.00030326008,0.0002923852,0.00064566557,0.00038392592,0.00045421807,0.0004517023,0.00033184065,0.0021707243,0.001235865],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000745166,0.000024800014,0.000096707015,0.000007962709,0.000002626173,0.00003674714,0.000009607058,0.000027250971,0.9994904,0.00006851873,0.000012374096,0.00014852207],"study_design_scores_gemma":[0.000034205597,0.00019369846,0.0027555295,0.0000043132613,0.000023795581,0.00031817646,0.000039119077,0.0015369775,0.99410737,0.000058415357,0.0009215149,0.0000068382096],"about_ca_topic_score_codex":0.0007343381,"about_ca_topic_score_gemma":0.0006325168,"teacher_disagreement_score":0.0016063268,"about_ca_system_score_codex":0.0005120426,"about_ca_system_score_gemma":0.00025125983,"threshold_uncertainty_score":0.0053736567},"labels":[],"label_agreement":null},{"id":"W2093922965","doi":"10.1016/j.antiviral.2009.08.009","title":"Human H1 promoter expressed short hairpin RNAs (shRNAs) suppress avian influenza virus replication in chicken CH-SAH and canine MDCK cells","year":2009,"lang":"en","type":"article","venue":"Antiviral Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Krell Institute; Ontario Ministry of Agriculture, Food and Rural Affairs; Poultry Industry Council; Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Canadian Poultry Research Council","keywords":"Virology; Biology; Viral replication; Replication (statistics); Small hairpin RNA; Influenza A virus; Avian influenza virus; Virus; Cell biology; Gene; Influenza A virus subtype H5N1; RNA; Genetics","score_opus":0.06178441009399893,"score_gpt":0.3820911159581269,"score_spread":0.32030670586412796,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093922965","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996747,0.0005814491,0.0010554425,0.000074497984,0.00004323059,0.00003241767,0.00041087763,0.00004042116,0.0010145595],"genre_scores_gemma":[0.9938373,0.0003006273,0.0019506516,0.000042067066,0.0000135536475,0.000040786836,0.0008488029,0.000018701734,0.0029475894],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997483,0.000050250164,0.00003362635,0.00004892759,0.00005023086,0.00006875422],"domain_scores_gemma":[0.99970716,0.00013208194,0.000039969498,0.00005119676,0.00002790539,0.000041734005],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000324047,0.00026827736,0.0002783665,0.00027716628,0.0002556145,0.0003590877,0.00021468417,0.00025900188,0.001196497],"category_scores_gemma":[0.00019162489,0.00021808523,0.00026573325,0.00014768926,0.00036470706,0.00021256485,0.0001823054,0.00067618943,0.0003619634],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017396014,0.000023937286,0.00019874016,0.000019104518,0.0000037786256,0.000018058821,0.000029076316,0.000055500343,0.99884737,0.00012243104,0.00006417274,0.0004438076],"study_design_scores_gemma":[0.000022223614,0.00032043704,0.0028192024,0.0000034761226,0.000010848985,0.00007629776,0.000063935586,0.0012872325,0.9941127,0.000023042881,0.0012577268,0.0000028208226],"about_ca_topic_score_codex":0.00238124,"about_ca_topic_score_gemma":0.004362179,"teacher_disagreement_score":0.00238124,"about_ca_system_score_codex":0.0004931013,"about_ca_system_score_gemma":0.00025769518,"threshold_uncertainty_score":0.004734814},"labels":[],"label_agreement":null},{"id":"W2094745777","doi":"10.1074/jbc.m113.519934","title":"Mitogen-activated Protein Kinase-mediated Licensing of Interferon Regulatory Factor 3/7 Reinforces the Cell Response to Virus","year":2013,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; U.S. Public Health Service; McGill University; National Institutes of Health; Thomas Jefferson University","keywords":"Interferon; Protein kinase A; Protein kinase R; Mitogen-activated protein kinase; Cell biology; Interferon regulatory factors; Kinase; Biology; Virology; Mitogen-activated protein kinase kinase; Immune system; Immunology; Innate immune system","score_opus":0.01693034811167715,"score_gpt":0.23206501311634578,"score_spread":0.21513466500466863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094745777","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9854316,0.0012925284,0.005595159,0.00022360432,0.00007616712,0.00004575969,0.00017449964,0.0001902119,0.0069704205],"genre_scores_gemma":[0.9949521,0.00039190706,0.0022252747,0.000053579373,0.000020783767,0.000019708212,0.00017975233,0.000023056842,0.0021338842],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998692,0.000022936207,0.0000048321253,0.000015401387,0.000037256134,0.00005022342],"domain_scores_gemma":[0.9998808,0.000023925517,0.000023335426,0.000019522968,0.00002004917,0.000032401924],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001810761,0.00025584953,0.00016970468,0.00033828453,0.00017961684,0.00026617773,0.00017386182,0.00020464539,0.0025474376],"category_scores_gemma":[0.00016586426,0.000095990676,0.0003335394,0.00009130443,0.0002996635,0.00022524985,0.0003919041,0.0006454635,0.00090657215],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000070955466,0.000023276883,0.00038615803,0.000020408646,0.0000018829686,0.000058530197,0.000009594044,0.000048732712,0.9967182,0.000463652,0.000055998647,0.0021425777],"study_design_scores_gemma":[0.000017720136,0.0001985448,0.006133703,0.000008944606,0.0000071288678,0.00026451453,0.000049550363,0.0012550405,0.9884085,0.0005123938,0.003139761,0.000004224246],"about_ca_topic_score_codex":0.00014468306,"about_ca_topic_score_gemma":0.00036626487,"teacher_disagreement_score":0.0025474376,"about_ca_system_score_codex":0.00024545606,"about_ca_system_score_gemma":0.00030064242,"threshold_uncertainty_score":0.008522034},"labels":[],"label_agreement":null},{"id":"W2095049386","doi":"10.1371/journal.pone.0082803","title":"Residues 240–250 in the C-Terminus of the Pirh2 Protein Complement the Function of the RING Domain in Self-Ubiquitination of the Pirh2 Protein","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":7,"is_retracted":true,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Heritage Medical Research Clinic","funders":"Alberta Heritage Foundation for Medical Research; Fondation pour la Recherche Médicale; University of Alberta; Canadian Institutes of Health Research; Alberta Cancer Foundation; Women and Children's Health Research Institute; Children's Health Research Institute","keywords":"Ubiquitin; Cell biology; Ring finger; RING finger domain; Ubiquitin ligase; Biology; Regulator; Ubiquitin-conjugating enzyme; Mdm2; Ubiquitin-Protein Ligases; Biochemistry; Transcription factor; Gene; Zinc finger","score_opus":0.02286323014256761,"score_gpt":0.21198018037707564,"score_spread":0.18911695023450803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095049386","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99328893,0.0011111132,0.0037532095,0.000088914785,0.0000364885,0.000022251666,0.0005292184,0.000054349304,0.0011156817],"genre_scores_gemma":[0.9933947,0.00024310689,0.003376628,0.00006618639,0.000013505776,0.00001901569,0.0011960139,0.000019127072,0.0016717466],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999083,0.0000146104985,0.000009867138,0.000027250126,0.000024340534,0.000015567455],"domain_scores_gemma":[0.99979705,0.00003216127,0.000059652448,0.00002584199,0.000018804338,0.000066367116],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012833133,0.0004044967,0.0003000371,0.00016609849,0.00017745828,0.0002472812,0.0002739292,0.00035722138,0.0023250354],"category_scores_gemma":[0.00017181417,0.00012328073,0.000431279,0.00013949661,0.00029457433,0.00024753006,0.00022992089,0.00042468094,0.0014855617],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018736951,0.00002868271,0.00048269692,0.000044052125,0.000010510953,0.0002572165,0.0000081751405,0.00014315202,0.9977977,0.000097111515,0.00004833383,0.0008950586],"study_design_scores_gemma":[0.000034070883,0.00019797485,0.011119256,0.000009052887,0.000018580437,0.0018434693,0.000030576637,0.0011645148,0.9805142,0.00010212081,0.004954559,0.000011703704],"about_ca_topic_score_codex":0.00031502638,"about_ca_topic_score_gemma":0.00026219682,"teacher_disagreement_score":0.0023250354,"about_ca_system_score_codex":0.0003286748,"about_ca_system_score_gemma":0.00016849347,"threshold_uncertainty_score":0.007777989},"labels":[],"label_agreement":null},{"id":"W2095082636","doi":"10.1186/1471-2164-15-1017","title":"A novel genetic locus linked to pro-inflammatory cytokines after virulent H5N1 virus infection in mice","year":2014,"lang":"en","type":"article","venue":"BMC Genomics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of Allergy and Infectious Diseases; U.S. Department of Health and Human Services; National Institutes of Health; U.S. Public Health Service; American Lebanese Syrian Associated Charities; National Institute on Alcohol Abuse and Alcoholism","keywords":"Virulence; Biology; Virus; Locus (genetics); Virology; Influenza A virus subtype H5N1; Genetics; Gene; Immunology","score_opus":0.013435941622801754,"score_gpt":0.2309184126000413,"score_spread":0.21748247097723955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095082636","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99435484,0.00050276594,0.0032302095,0.000103710074,0.00003305366,0.000039665865,0.0009819077,0.00016089606,0.0005930848],"genre_scores_gemma":[0.9864001,0.0005468251,0.0059852838,0.00013081168,0.00002978109,0.00014929107,0.002024385,0.00013784984,0.004595639],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99968004,0.00004549612,0.000031681426,0.00012672982,0.0000633778,0.000052707717],"domain_scores_gemma":[0.9995389,0.000062490086,0.0002314526,0.000036980855,0.000017267574,0.000113003196],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002467252,0.00080049614,0.00035846996,0.0010575318,0.00027755846,0.00038852455,0.00044831986,0.00063202484,0.0033438904],"category_scores_gemma":[0.00017115097,0.00034934984,0.00050532696,0.0002983186,0.00051024894,0.00016260782,0.00041057877,0.0011578094,0.00074295595],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024936843,0.000063503954,0.00052890874,0.000022986518,0.000009712232,0.000100083016,0.000019825917,0.000032022886,0.9980939,0.00008560799,0.000025639254,0.0007684276],"study_design_scores_gemma":[0.0003862128,0.0023539404,0.08845779,0.00010276192,0.00016521875,0.0033524046,0.00016412979,0.002724028,0.8966553,0.00026542702,0.005334733,0.000037959886],"about_ca_topic_score_codex":0.00047261492,"about_ca_topic_score_gemma":0.000617715,"teacher_disagreement_score":0.0033438904,"about_ca_system_score_codex":0.00042321067,"about_ca_system_score_gemma":0.00023227165,"threshold_uncertainty_score":0.011186421},"labels":[],"label_agreement":null},{"id":"W2095208951","doi":"10.1371/journal.pone.0101436","title":"In Silico Analysis of Functional Single Nucleotide Polymorphisms in the Human TRIM22 Gene","year":2014,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research","keywords":"In silico; Biology; Genetics; Computational biology; Single-nucleotide polymorphism; Gene; Genotype","score_opus":0.04139006907804889,"score_gpt":0.23279727421810623,"score_spread":0.19140720514005732,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095208951","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9840906,0.0003029206,0.012728338,0.00009405448,0.00002593617,0.00004537377,0.0015536664,0.00030251415,0.0008566535],"genre_scores_gemma":[0.97513956,0.00016541804,0.019529697,0.00009401697,0.000012205649,0.000056315766,0.004670226,0.000073113726,0.00025943475],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99941504,0.00028284919,0.000039270148,0.00012831639,0.000076978635,0.0000575857],"domain_scores_gemma":[0.99894804,0.0007748345,0.00010028021,0.00004907687,0.00006543318,0.00006244088],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012891509,0.00065096415,0.000944949,0.0010033882,0.00051763176,0.00056413515,0.0006864684,0.0006781957,0.0013561512],"category_scores_gemma":[0.0020648914,0.0002810023,0.0014680751,0.00068910664,0.00021153776,0.0002296628,0.00033629828,0.00035797714,0.000394645],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003117056,0.0011178091,0.26826182,0.000884366,0.002726485,0.0045363046,0.00030060014,0.568784,0.1057145,0.0029258975,0.0031041016,0.038527057],"study_design_scores_gemma":[0.00018772297,0.00038882784,0.03515303,0.000037824877,0.00074808026,0.0008832682,0.00012221215,0.94882584,0.011244359,0.0010329698,0.0013282758,0.000047542806],"about_ca_topic_score_codex":0.0021975427,"about_ca_topic_score_gemma":0.003422208,"teacher_disagreement_score":0.0021975427,"about_ca_system_score_codex":0.00034828487,"about_ca_system_score_gemma":0.0007430628,"threshold_uncertainty_score":0.0068176985},"labels":[],"label_agreement":null},{"id":"W2096258050","doi":"10.1074/jbc.m109.019711","title":"Heterogeneous Nuclear Ribonucleoprotein K Represses the Production of Pro-apoptotic Bcl-xS Splice Isoform","year":2009,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Gene isoform; Heterogeneous nuclear ribonucleoprotein; Ribonucleoprotein; Cell biology; splice; Alternative splicing; RNA splicing; Chemistry; Apoptosis; Production (economics); Molecular biology; Biology; RNA; Gene; Biochemistry","score_opus":0.018271498445305717,"score_gpt":0.245023619147203,"score_spread":0.2267521207018973,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096258050","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99712175,0.00039313003,0.0015789655,0.000033894758,0.000009450533,0.000004833498,0.00005284533,0.000042918884,0.00076217146],"genre_scores_gemma":[0.9976172,0.00018286287,0.0008311509,0.00001568419,0.0000045139764,0.0000044831004,0.00015128526,0.0000105742765,0.0011822814],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988043,0.000024627987,0.000010911773,0.000022799462,0.00002924813,0.00003195224],"domain_scores_gemma":[0.99985456,0.000040991854,0.000041130632,0.00002496446,0.000014213824,0.000024103752],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009956421,0.00019831237,0.00013815828,0.00010598295,0.000078449484,0.00022127795,0.00015154325,0.00010768451,0.0007455361],"category_scores_gemma":[0.0001364639,0.00009445432,0.00011394361,0.000061605584,0.00023093019,0.0000804506,0.00015818428,0.0002661341,0.00033929644],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004063633,0.0000067044793,0.00010811446,0.0000065783656,0.0000010622402,0.000013384896,0.00000441568,0.000018708304,0.9994036,0.000049819497,0.000006970678,0.0003400229],"study_design_scores_gemma":[0.000007859486,0.000097567536,0.002442013,0.0000027285496,0.0000050329736,0.00008146306,0.000015003976,0.00076515094,0.9959234,0.000034998688,0.0006233232,0.0000015109696],"about_ca_topic_score_codex":0.0003694098,"about_ca_topic_score_gemma":0.00064052816,"teacher_disagreement_score":0.0007455361,"about_ca_system_score_codex":0.00023796018,"about_ca_system_score_gemma":0.00015217545,"threshold_uncertainty_score":0.0024940372},"labels":[],"label_agreement":null},{"id":"W2096423662","doi":"10.1128/jvi.02017-12","title":"Influenza Virus Induces Apoptosis via BAD-Mediated Mitochondrial Dysregulation","year":2012,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital Research Institute of Manitoba; University of Manitoba; Research Manitoba","funders":"Canadian Institutes of Health Research; Manitoba Health Research Council; Research Manitoba; Health Sciences Centre Foundation","keywords":"Biology; Viral replication; Apoptosis; Programmed cell death; Virus; Cell biology; Influenza A virus; Caspase; Gene knockdown; Virology; Viral protein; Genetics","score_opus":0.016345201983689234,"score_gpt":0.27015056916268165,"score_spread":0.25380536717899244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096423662","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942614,0.0019670525,0.002393326,0.00006777337,0.000029476874,0.000016835635,0.00015051704,0.000044200093,0.0010694994],"genre_scores_gemma":[0.99756336,0.0006740844,0.00088497443,0.000031665193,0.000006643109,0.000011515112,0.00020349122,0.000003950529,0.0006202875],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988866,0.000027400183,0.000012961717,0.00001698265,0.000025944422,0.000027967448],"domain_scores_gemma":[0.99994886,0.000008935909,0.000014687384,0.0000070213036,0.000007662804,0.000012883033],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016464056,0.00032706317,0.00017350343,0.00018574961,0.00016757059,0.00021827266,0.000084557316,0.00015170792,0.00069207326],"category_scores_gemma":[0.000089958216,0.00011582486,0.00021694704,0.00009358406,0.00019230212,0.00018683581,0.00020472151,0.00039575377,0.00021638184],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013222074,0.000015966616,0.00036375845,0.000035558063,0.0000065187414,0.000048730017,0.000008767627,0.000036780646,0.99825364,0.000104046136,0.000022504322,0.0009713977],"study_design_scores_gemma":[0.000026799442,0.00052875734,0.012991878,0.00000760485,0.000020621834,0.00073024136,0.00002593696,0.0011981097,0.98289573,0.00017706265,0.0013917928,0.000005431987],"about_ca_topic_score_codex":0.00011313962,"about_ca_topic_score_gemma":0.00019630746,"teacher_disagreement_score":0.00069207326,"about_ca_system_score_codex":0.00020347354,"about_ca_system_score_gemma":0.00009742325,"threshold_uncertainty_score":0.0023152232},"labels":[],"label_agreement":null},{"id":"W2097296286","doi":"10.1002/glia.20441","title":"Simvastatin regulates oligodendroglial process dynamics and survival","year":2006,"lang":"en","type":"article","venue":"Glia","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Simvastatin; Biology; Progenitor cell; RHOA; Oligodendrocyte; Myelin; Cell biology; Statin; Pharmacology; Stem cell; Neuroscience; Central nervous system; Signal transduction; Biochemistry","score_opus":0.004966295346580998,"score_gpt":0.2296574477942582,"score_spread":0.2246911524476772,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097296286","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899041,0.0061506014,0.0016718439,0.000091635695,0.000015708867,0.000016921245,0.00030699722,0.00007394351,0.0017681656],"genre_scores_gemma":[0.99412894,0.0020587877,0.0010731395,0.000026952532,0.0000080733,0.000019357387,0.00032912154,0.000015157806,0.002340578],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988556,0.000018034782,0.000011417584,0.000020903683,0.00002681195,0.00003720306],"domain_scores_gemma":[0.9998969,0.0000119694505,0.000033677406,0.0000094200495,0.000019486675,0.000028529983],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013977716,0.00018563699,0.00024259085,0.00021897345,0.00017817495,0.00036836482,0.00013249805,0.00020050551,0.0010221145],"category_scores_gemma":[0.00012685117,0.000074093405,0.0001598889,0.00014335128,0.00019262968,0.00021415834,0.00018113948,0.00024469197,0.00037064851],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036987726,0.000015884096,0.00050284696,0.000035923775,0.0000045141196,0.000033423064,0.00001869192,0.0000422137,0.9959776,0.00011143147,0.000046363828,0.002841287],"study_design_scores_gemma":[0.000031413263,0.00047428452,0.014560185,0.000008096365,0.000027018299,0.00019466183,0.00006281955,0.0009931953,0.97954047,0.00009901193,0.0040039653,0.000004944826],"about_ca_topic_score_codex":0.0010243308,"about_ca_topic_score_gemma":0.0019551355,"teacher_disagreement_score":0.0010243308,"about_ca_system_score_codex":0.00039670052,"about_ca_system_score_gemma":0.00028958824,"threshold_uncertainty_score":0.00341928},"labels":[],"label_agreement":null},{"id":"W2097354001","doi":"10.1002/eji.201545794","title":"Mouse superkiller‐2‐like helicase DDX60 is dispensable for type I IFN induction and immunity to multiple viruses","year":2015,"lang":"en","type":"article","venue":"European Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Cancer Research UK; Francis Crick Institute","keywords":"Biology; Virology; Virus; Sindbis virus; Interferon; Herpes simplex virus; Gene; Sendai virus; RNA; Genetics","score_opus":0.08404777659450959,"score_gpt":0.29872245433285655,"score_spread":0.21467467773834698,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097354001","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99285924,0.0023971996,0.0023817369,0.00010242117,0.00003863114,0.000014635205,0.0006225166,0.00010013306,0.0014835284],"genre_scores_gemma":[0.9939277,0.000663878,0.0009409944,0.000038713413,0.00001465041,0.000018524815,0.0010781898,0.000037774775,0.0032794245],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974936,0.000036691486,0.00003981987,0.00006245802,0.00007232486,0.000039344774],"domain_scores_gemma":[0.9995441,0.00006726555,0.00014617892,0.000077641926,0.000017037444,0.00014773992],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014753625,0.0003689957,0.00032995132,0.000310556,0.0001875562,0.00044252863,0.00024425585,0.00034380765,0.0030856645],"category_scores_gemma":[0.00016765979,0.00025746776,0.00024494593,0.00016084062,0.00035035508,0.0002928405,0.00031089108,0.00046182945,0.001099054],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012865156,0.000012742567,0.00028783584,0.000023964587,0.0000033994943,0.00008015798,0.000008911761,0.000020739482,0.9985085,0.00010806832,0.000019641648,0.0007973077],"study_design_scores_gemma":[0.000046574518,0.0002554475,0.01329979,0.000013419679,0.000021022071,0.0015832384,0.000033485638,0.0008294721,0.9773027,0.00018094743,0.0064272597,0.0000067016954],"about_ca_topic_score_codex":0.0002446822,"about_ca_topic_score_gemma":0.00031472708,"teacher_disagreement_score":0.0030856645,"about_ca_system_score_codex":0.00020386599,"about_ca_system_score_gemma":0.00022153402,"threshold_uncertainty_score":0.01032263},"labels":[],"label_agreement":null},{"id":"W2098128683","doi":"10.1038/ni.2756","title":"ELF4 is critical for induction of type I interferon and the host antiviral response","year":2013,"lang":"en","type":"article","venue":"Nature Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":125,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; U.S. Public Health Service; National Institutes of Health; Howard Hughes Medical Institute","keywords":"IRF3; Interferon; IRF7; Interferon regulatory factors; Innate immune system; Transactivation; IRF8; Biology; TANK-binding kinase 1; Arbovirus Infections; IRF1; Transcription factor; Interferon type I; Cell biology; Virology; Immune system; Immunology; Genetics; Virus; Signal transduction; Arbovirus; Gene","score_opus":0.007751252328781059,"score_gpt":0.27718234214846116,"score_spread":0.2694310898196801,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2098128683","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9662978,0.010352999,0.009687642,0.0015737434,0.00040359644,0.00004084287,0.0009866217,0.00048003352,0.010176722],"genre_scores_gemma":[0.9837097,0.0010348494,0.0029747426,0.00027487442,0.00009088191,0.00002519525,0.0014280406,0.000112178604,0.010349551],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999749,0.00003278936,0.000011254588,0.00003750889,0.00005838138,0.000111090136],"domain_scores_gemma":[0.99974924,0.00003579196,0.000056313595,0.000029768064,0.000046246336,0.000082560786],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033085662,0.0004135735,0.00030702274,0.0004410849,0.0005461557,0.00085766043,0.00048375106,0.00068146497,0.0042435834],"category_scores_gemma":[0.00032558356,0.00033377833,0.0003830766,0.00014953424,0.00039935316,0.0004886702,0.00050580455,0.0010149359,0.0015001183],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010560346,0.00005647451,0.0012209477,0.000055831842,0.00001842885,0.00023022457,0.000013311668,0.00019925169,0.9897872,0.0007122685,0.0007105527,0.0059394473],"study_design_scores_gemma":[0.00013891501,0.0001540329,0.028009562,0.000024366222,0.000032845513,0.0007761843,0.00011054314,0.0021210117,0.94921374,0.0011480891,0.01824759,0.000023128623],"about_ca_topic_score_codex":0.0007401028,"about_ca_topic_score_gemma":0.000883513,"teacher_disagreement_score":0.0042435834,"about_ca_system_score_codex":0.0010831332,"about_ca_system_score_gemma":0.00041176585,"threshold_uncertainty_score":0.014196217},"labels":[],"label_agreement":null},{"id":"W2099542884","doi":"10.1165/rcmb.2009-0203oc","title":"Human Rhinovirus–Induced Epithelial Production of CXCL10 Is Dependent upon IFN Regulatory Factor-1","year":2009,"lang":"en","type":"article","venue":"American Journal of Respiratory Cell and Molecular Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":69,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity; University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Rhinovirus; CXCL10; Production (economics); IRF1; Cell biology; Virology; Biology; Chemokine; Transcription factor; Immunology; Gene; Immune system; Virus; Genetics","score_opus":0.011381897166214655,"score_gpt":0.268520155834094,"score_spread":0.2571382586678793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099542884","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99148834,0.002675123,0.0021148056,0.00017069375,0.00010275098,0.000081001344,0.0013801967,0.000094731244,0.0018924029],"genre_scores_gemma":[0.98774767,0.0018171573,0.0034689142,0.00015660145,0.00003249991,0.00010793641,0.0032459146,0.000029101295,0.0033941942],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997323,0.000054509495,0.00003037251,0.000039323022,0.000054831395,0.00008865054],"domain_scores_gemma":[0.99985695,0.000034514338,0.000028256716,0.00002217415,0.000024564873,0.000033510685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025022423,0.00034838947,0.00031496,0.00019843607,0.00012804726,0.00028400627,0.00012730752,0.00020627235,0.0020013552],"category_scores_gemma":[0.00014676411,0.00015601328,0.00051232945,0.00010126484,0.00017605771,0.00020431571,0.00018394148,0.0007276072,0.00064479944],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022080481,0.000057880163,0.00023074982,0.000059571634,0.0000037342436,0.00003807091,0.000012371407,0.000026603797,0.9983664,0.000026018666,0.000057225705,0.00090054044],"study_design_scores_gemma":[0.00005243164,0.0006586481,0.033103477,0.00003358698,0.000022679971,0.00048228298,0.00008310441,0.0013245832,0.9599246,0.000046459874,0.004257352,0.000010854503],"about_ca_topic_score_codex":0.00060502096,"about_ca_topic_score_gemma":0.0006726868,"teacher_disagreement_score":0.0020013552,"about_ca_system_score_codex":0.00032660356,"about_ca_system_score_gemma":0.0002514518,"threshold_uncertainty_score":0.0066951513},"labels":[],"label_agreement":null},{"id":"W2099866950","doi":"10.1038/ni.1979","title":"Ribose 2′-O-methylation provides a molecular signature for the distinction of self and non-self mRNA dependent on the RNA sensor Mda5","year":2011,"lang":"en","type":"article","venue":"Nature Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":802,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Universität Heidelberg; Medical Research Council; Deutsche Forschungsgemeinschaft; European Commission; Wellcome Trust; Institute of Genetics; National Institutes of Health; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Novartis Foundation; Biotechnology and Biological Sciences Research Council; Austrian Science Fund; Imperial College London; National Science Foundation","keywords":"Methylation; RNA; Biology; Methyltransferase; Messenger RNA; RNA methylation; Molecular biology; Interferon; Cytoplasm; Cell biology; Gene; Biochemistry; Genetics","score_opus":0.008543444517332889,"score_gpt":0.22922379236256213,"score_spread":0.22068034784522925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099866950","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876474,0.0009446381,0.008508256,0.00013767,0.00003632346,0.000009233602,0.00019166227,0.00013341193,0.0023913193],"genre_scores_gemma":[0.99640983,0.00018722385,0.0020951973,0.00006716548,0.0000075740227,0.0000042186794,0.00019300124,0.000022463852,0.0010133656],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998894,0.000017258477,0.0000042078036,0.000035067093,0.000026291002,0.000027752789],"domain_scores_gemma":[0.9998659,0.000025913563,0.000041995092,0.000022787131,0.000016303642,0.000027140768],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015115878,0.00022544837,0.00015081254,0.00015931396,0.0001454695,0.0003074973,0.00022327817,0.00030359824,0.0011142025],"category_scores_gemma":[0.0002051381,0.0001826419,0.00021596302,0.00009022884,0.00027604788,0.00034842483,0.00024500387,0.00044172382,0.00043762632],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053629265,0.0000024387073,0.00028422227,0.000007972122,0.0000021878495,0.000021192394,0.00001234046,0.000030593743,0.99848807,0.00023570494,0.000021376132,0.00084023795],"study_design_scores_gemma":[0.0000030059198,0.00005995173,0.004325807,0.0000025494226,0.000005629084,0.000103961,0.000021447631,0.00055124174,0.9940467,0.00014567375,0.0007293092,0.000004772051],"about_ca_topic_score_codex":0.0005571688,"about_ca_topic_score_gemma":0.0010791427,"teacher_disagreement_score":0.0011142025,"about_ca_system_score_codex":0.00027583714,"about_ca_system_score_gemma":0.0001245804,"threshold_uncertainty_score":0.0037273169},"labels":[],"label_agreement":null},{"id":"W2100145928","doi":"10.1128/jvi.02495-05","title":"Dissociation of a MAVS/IPS-1/VISA/Cardif-IKKε Molecular Complex from the Mitochondrial Outer Membrane by Hepatitis C Virus NS3-4A Proteolytic Cleavage","year":2006,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":216,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Biology; NS3; Cell biology; Transmembrane domain; Molecular biology; Virology; Hepatitis C virus; Biochemistry; Virus; Gene","score_opus":0.006215632620372678,"score_gpt":0.22003402817193038,"score_spread":0.2138183955515577,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100145928","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99289834,0.00020968138,0.005526679,0.00007434882,0.000015725369,0.00001687488,0.00036019905,0.00022338163,0.00067475584],"genre_scores_gemma":[0.9845483,0.00022249046,0.00954007,0.00006377146,0.0000040348377,0.000047902795,0.002862964,0.00016157824,0.0025489936],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986875,0.000006514883,0.000010934417,0.00003530397,0.00004600112,0.000032472464],"domain_scores_gemma":[0.99992514,0.000009832454,0.000021900969,0.000008085965,0.0000070125047,0.00002791773],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001260467,0.00029918787,0.0002539924,0.0002859808,0.00019975027,0.0003321312,0.00032380887,0.00023499799,0.0012215094],"category_scores_gemma":[0.00014992144,0.00017668935,0.00037148054,0.00015339718,0.00018181847,0.00030271357,0.00029398268,0.00051532907,0.00056423165],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009960858,0.000017771305,0.00053804007,0.000035969857,0.0000111806985,0.000109028995,0.000018993052,0.00013315341,0.9974559,0.00014478748,0.00007740166,0.0013581279],"study_design_scores_gemma":[0.000013043427,0.00003596436,0.0051687956,0.000004746782,0.000010065684,0.00037702642,0.000030970088,0.0050109793,0.98759276,0.000073427494,0.0016753892,0.00000681457],"about_ca_topic_score_codex":0.0007410492,"about_ca_topic_score_gemma":0.00075003336,"teacher_disagreement_score":0.0012215094,"about_ca_system_score_codex":0.00081581285,"about_ca_system_score_gemma":0.0003589708,"threshold_uncertainty_score":0.0059191585},"labels":[],"label_agreement":null},{"id":"W2100246018","doi":"10.1128/jvi.00665-12","title":"5′-Triphosphate-Short Interfering RNA: Potent Inhibition of Influenza A Virus Infection by Gene Silencing and RIG-I Activation","year":2012,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research","keywords":"Biology; Small interfering RNA; Virus; Virology; RIG-I; Influenza A virus; Gene silencing; RNA interference; RNA; Gene; Orthomyxoviridae; RNA silencing; Biochemistry","score_opus":0.01530701944840319,"score_gpt":0.2593098339585578,"score_spread":0.2440028145101546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100246018","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9489747,0.011222709,0.031940848,0.0003460728,0.0001817537,0.00026432172,0.0007213726,0.00032651413,0.006021669],"genre_scores_gemma":[0.97360265,0.003631225,0.016901443,0.00019776209,0.000039381273,0.00018429042,0.00077110896,0.00003513975,0.004637099],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979836,0.00004062963,0.000025028514,0.000051558734,0.00005982789,0.000024648687],"domain_scores_gemma":[0.9999386,0.000015944257,0.000018509458,0.000008683693,0.0000059720405,0.000012341439],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030011352,0.00050125836,0.00031301007,0.00015900435,0.000097546326,0.00025985474,0.00025093785,0.00046880732,0.0009003408],"category_scores_gemma":[0.00012798488,0.00013938213,0.00030731852,0.00011224213,0.0002198255,0.0002389266,0.00020327186,0.00053949014,0.00047899946],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043563443,0.000019050725,0.000032344564,0.00003907509,0.000003230333,0.00001857849,0.000003777276,0.000060096172,0.9980574,0.0000650803,0.000027091211,0.0016306812],"study_design_scores_gemma":[0.000012819207,0.000315069,0.00043350112,0.0000028151626,0.0000105151275,0.0001282195,0.000002112344,0.00045885853,0.9969458,0.000027335802,0.0016606248,0.000002420401],"about_ca_topic_score_codex":0.00018107107,"about_ca_topic_score_gemma":0.0002861286,"teacher_disagreement_score":0.0009003408,"about_ca_system_score_codex":0.00018504287,"about_ca_system_score_gemma":0.0001965515,"threshold_uncertainty_score":0.0030118823},"labels":[],"label_agreement":null},{"id":"W2101028231","doi":"10.1128/jvi.74.3.1513-1523.2000","title":"Alpha/Beta Interferons Potentiate Virus-Induced Apoptosis through Activation of the FADD/Caspase-8 Death Signaling Pathway","year":2000,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":294,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; National Institutes of Health; University of Toronto","keywords":"FADD; Biology; Vesicular stomatitis virus; Protein kinase R; Interferon; Virus; Apoptosis; Viral replication; Cell biology; Programmed cell death; Virology; Signal transduction; EIF-2 kinase; Molecular biology; Kinase; Caspase; Protein kinase A","score_opus":0.02456890451416387,"score_gpt":0.25542387103818787,"score_spread":0.23085496652402399,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101028231","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9906247,0.0038026504,0.0010868381,0.00012217493,0.000061003142,0.00002393033,0.000116268144,0.000050462713,0.004111918],"genre_scores_gemma":[0.9954711,0.0014502683,0.00078127923,0.00004350562,0.000024794927,0.00001751536,0.00013566087,0.0000060657267,0.002069878],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988663,0.00003558703,0.000010928463,0.000010450801,0.00002716417,0.000029197088],"domain_scores_gemma":[0.99992025,0.000020693322,0.0000190582,0.0000106388925,0.000011791407,0.000017519955],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018298182,0.00038716133,0.00014308962,0.00017837997,0.0000809346,0.00017480066,0.00006421952,0.00013071905,0.0014165882],"category_scores_gemma":[0.00010455934,0.00007036416,0.00015966297,0.00005682901,0.000113567214,0.00012985352,0.00011896367,0.00034993832,0.00034893342],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033929225,0.00006395375,0.0005304504,0.000057411697,0.0000068724567,0.00007546546,0.000015729336,0.000041857023,0.99454206,0.00011204608,0.00008543206,0.0041294624],"study_design_scores_gemma":[0.00006354638,0.001088032,0.0081146555,0.000016292784,0.000021114429,0.00057364843,0.000029822611,0.00061381253,0.9849967,0.00011035005,0.004369237,0.0000027941774],"about_ca_topic_score_codex":0.00009582842,"about_ca_topic_score_gemma":0.00014010088,"teacher_disagreement_score":0.0014165882,"about_ca_system_score_codex":0.00013928952,"about_ca_system_score_gemma":0.00006566647,"threshold_uncertainty_score":0.0047389865},"labels":[],"label_agreement":null},{"id":"W2102379760","doi":"10.1084/jem.20040528","title":"Differential Requirement for TANK-binding Kinase-1 in Type I Interferon Responses to Toll-like Receptor Activation and Viral Infection","year":2004,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":400,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Cancer Institute; National Institutes of Health; Howard Hughes Medical Institute","keywords":"TANK-binding kinase 1; IκB kinase; IRF3; Interferon regulatory factors; Biology; Kinase; Interferon; TRIF; Toll-like receptor; Molecular biology; Cell biology; Transcription factor; Signal transduction; NFKB1; Receptor; NF-κB; Virology; Innate immune system; Protein kinase A; MAP kinase kinase kinase; Biochemistry; Gene","score_opus":0.0300952403224842,"score_gpt":0.32342494892033224,"score_spread":0.293329708597848,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102379760","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99673355,0.0016994376,0.00089686713,0.00006990826,0.00002037683,0.000008346301,0.00018944028,0.000029449475,0.00035282073],"genre_scores_gemma":[0.99767214,0.00043752624,0.0008234092,0.00003960948,0.000008369089,0.000018215522,0.00036672893,0.000014566039,0.0006195076],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996587,0.00004816546,0.00004270529,0.000059686074,0.000079718266,0.00011105405],"domain_scores_gemma":[0.9996605,0.000049617247,0.00011380693,0.000031591593,0.000025115536,0.00011936627],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029283183,0.0004300173,0.00040299218,0.0003248162,0.00020801694,0.00049266464,0.00034583494,0.00048579375,0.0008376007],"category_scores_gemma":[0.000286628,0.00030336302,0.00045235635,0.0001394458,0.00041706068,0.00040202276,0.0004514584,0.000631303,0.00049369084],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009728684,0.000005453246,0.00018689469,0.000013925405,0.000001821319,0.000028775408,0.000007373599,0.000023183935,0.9994523,0.000036755548,0.0000039269876,0.00014233665],"study_design_scores_gemma":[0.000048541908,0.00026410824,0.018760858,0.000015341486,0.000032841905,0.001092729,0.00008038532,0.0012080197,0.9774329,0.00017590147,0.0008681031,0.000020215874],"about_ca_topic_score_codex":0.00042064197,"about_ca_topic_score_gemma":0.00045335683,"teacher_disagreement_score":0.0008376007,"about_ca_system_score_codex":0.0006847298,"about_ca_system_score_gemma":0.0002808518,"threshold_uncertainty_score":0.004968047},"labels":[],"label_agreement":null},{"id":"W2103433909","doi":"10.1126/science.1224026","title":"Mycobacterial Disease and Impaired IFN-γ Immunity in Humans with Inherited ISG15 Deficiency","year":2012,"lang":"en","type":"article","venue":"Science","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":566,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"National Center for Advancing Translational Sciences; National Institute of Allergy and Infectious Diseases; National Cancer Institute","keywords":"ISG15; Immunology; Immunity; Biology; Tuberculosis; Disease; Virology; Medicine; Immune system; Genetics; Gene","score_opus":0.014086806644357918,"score_gpt":0.25165529855365293,"score_spread":0.23756849190929502,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2103433909","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975841,0.00055352214,0.00049415504,0.00011582565,0.000009612641,0.000011972667,0.00009148279,0.000034022265,0.0011053074],"genre_scores_gemma":[0.9989241,0.00023493223,0.00033382358,0.00007695844,0.000016236254,0.0000047342296,0.00007749955,0.000008083405,0.000323693],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998311,0.0000308355,0.00002865916,0.000057138677,0.000025976597,0.000026379957],"domain_scores_gemma":[0.9998272,0.000041115232,0.00006361915,0.000019546924,0.000013743093,0.00003480076],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019468038,0.0011372718,0.00051100337,0.0009957136,0.0005925995,0.0004336075,0.00014759858,0.000860041,0.0024636702],"category_scores_gemma":[0.00048512671,0.0003353701,0.00028100127,0.00037543752,0.00090460276,0.0003298806,0.00039195432,0.00041276054,0.00036836675],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003850515,0.0004952876,0.41622588,0.00037747485,0.00034251108,0.23995307,0.002179441,0.00056992244,0.30070925,0.0016606526,0.0015163808,0.032119714],"study_design_scores_gemma":[0.00017589208,0.0019915225,0.36218023,0.00014511825,0.00042083382,0.5847371,0.0008503003,0.0012461125,0.041596442,0.0018426988,0.0047530765,0.00006065835],"about_ca_topic_score_codex":0.00072980754,"about_ca_topic_score_gemma":0.00064650516,"teacher_disagreement_score":0.0024636702,"about_ca_system_score_codex":0.00017072831,"about_ca_system_score_gemma":0.00016964758,"threshold_uncertainty_score":0.008241773},"labels":[],"label_agreement":null},{"id":"W2104756450","doi":"10.1093/jmcb/mjp048","title":"STING-ing the Antiviral Pathway","year":2009,"lang":"en","type":"article","venue":"Journal of Molecular Cell Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Terry Fox Research Institute","funders":"","keywords":"Sting; DNA; Biology; DNA damage; Cell biology; Stimulator of interferon genes; Cytosol; Computational biology; Genetics; Virology; Innate immune system; Biochemistry; Immune system","score_opus":0.0074656626209783335,"score_gpt":0.23113769358712175,"score_spread":0.2236720309661434,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2104756450","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80582273,0.118533604,0.030049244,0.0020581179,0.00089680264,0.00011231783,0.00161914,0.0007447404,0.040163208],"genre_scores_gemma":[0.9678164,0.016379138,0.0041818335,0.00024543438,0.00014316197,0.000035363435,0.0007905748,0.000017231212,0.01039079],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998692,0.000022481643,0.0000071202417,0.00003018023,0.00003692385,0.00003404895],"domain_scores_gemma":[0.9998988,0.00001209541,0.000019464425,0.000016119948,0.000022407861,0.000031162137],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020636876,0.00046833433,0.00027017324,0.0002283479,0.00026415422,0.0009003296,0.00016164195,0.00030925748,0.00273711],"category_scores_gemma":[0.00013533083,0.000083297295,0.0002376176,0.00015315645,0.0003690689,0.0005614349,0.00039702645,0.0009818554,0.0009793343],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003414293,0.000040105628,0.0005249212,0.00042091525,0.000010194104,0.00020155062,0.00004868003,0.00021392778,0.9547902,0.00785408,0.00062604924,0.03492785],"study_design_scores_gemma":[0.000083101666,0.0006809155,0.010558347,0.0002502372,0.000075380434,0.001626165,0.00021310394,0.006678356,0.88217133,0.008150241,0.089486055,0.000026815556],"about_ca_topic_score_codex":0.00026336132,"about_ca_topic_score_gemma":0.0002728535,"teacher_disagreement_score":0.00273711,"about_ca_system_score_codex":0.00062448275,"about_ca_system_score_gemma":0.0005832782,"threshold_uncertainty_score":0.009156525},"labels":[],"label_agreement":null},{"id":"W2105018942","doi":"10.1128/jvi.78.4.1706-1717.2004","title":"Innate Cellular Response to Virus Particle Entry Requires IRF3 but Not Virus Replication","year":2004,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":202,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Biology; IRF3; Virus; Virology; Interferon; Vesicular stomatitis virus; Viral replication; IRF7; Innate immune system; Sendai virus; DNA virus; Viral entry; Sindbis virus; Viral transformation; Ectromelia virus; Interferon regulatory factors; Antibody-dependent enhancement; Vaccinia; RNA; Immune system; Immunology; Gene; Genetics","score_opus":0.017654565124581915,"score_gpt":0.27457651401082944,"score_spread":0.25692194888624753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105018942","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9840222,0.0041882135,0.006492589,0.00023062182,0.00010778752,0.00005725426,0.0011477452,0.00027858678,0.0034750532],"genre_scores_gemma":[0.9935574,0.00083818124,0.002722871,0.00010574657,0.00003359473,0.00004480616,0.0012833881,0.000021218586,0.001392809],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997447,0.000025758705,0.00002260803,0.00005759152,0.0000616148,0.00008764063],"domain_scores_gemma":[0.99979156,0.00003670157,0.000057742705,0.00004862094,0.000033945544,0.000031534175],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024799377,0.00032770235,0.00029159235,0.00021281997,0.00028568076,0.00039180732,0.00022477955,0.00044084634,0.0023533301],"category_scores_gemma":[0.00024150709,0.0001245519,0.00063500146,0.00015044888,0.00027399295,0.00042081566,0.00037896456,0.0009323499,0.0013077292],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013032522,0.000019853138,0.0005272967,0.000046343153,0.00000460792,0.000058922844,0.000015159707,0.000026636324,0.9976044,0.00012747316,0.00006292087,0.0013760658],"study_design_scores_gemma":[0.000022316219,0.00026598407,0.028607175,0.000017000551,0.000013466446,0.0009915148,0.000054179643,0.0005310986,0.9654129,0.00027225015,0.003798518,0.000013564133],"about_ca_topic_score_codex":0.0005635676,"about_ca_topic_score_gemma":0.0005714001,"teacher_disagreement_score":0.0023533301,"about_ca_system_score_codex":0.0005228105,"about_ca_system_score_gemma":0.00039022052,"threshold_uncertainty_score":0.007872701},"labels":[],"label_agreement":null},{"id":"W2106128014","doi":"10.1371/journal.pone.0033098","title":"Activation of Interferon Regulatory Factor 5 by Site Specific Phosphorylation","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Institute of Allergy and Infectious Diseases; National Cancer Institute","keywords":"IRF5; Phosphorylation; Interferon regulatory factors; Transcription factor; Biology; Activator (genetics); Cell biology; IRF8; STAT1; Molecular biology; Receptor; Biochemistry; Gene","score_opus":0.03443147117709183,"score_gpt":0.22052060288968447,"score_spread":0.18608913171259264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106128014","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9820403,0.006287787,0.005703733,0.00014881062,0.000067176945,0.00004667994,0.00051888474,0.00009759545,0.0050889445],"genre_scores_gemma":[0.99224263,0.0016271984,0.0034584147,0.00008773921,0.000010308634,0.000017784532,0.0006439003,0.0000077676195,0.0019042173],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999144,0.000014047569,0.000006815555,0.000021752237,0.000020352185,0.000022560365],"domain_scores_gemma":[0.99997175,0.0000032746866,0.0000109191,0.0000041430085,0.0000032056662,0.000006657337],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011961819,0.00028102752,0.00012791826,0.00011755634,0.000109355715,0.00018171985,0.0001259991,0.00017454117,0.0018615766],"category_scores_gemma":[0.00008472843,0.00008330525,0.00023332956,0.00009079123,0.00010522628,0.0001497527,0.00015767409,0.00023802031,0.00044361473],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000131381,0.000010340599,0.00018443812,0.000039306644,0.00000413595,0.00004009555,0.0000040011305,0.000063682935,0.99702185,0.00015580069,0.000040712865,0.0023042676],"study_design_scores_gemma":[0.000024946936,0.00017947651,0.006244076,0.000011289401,0.000012192977,0.00032079476,0.000010887175,0.00075360644,0.98677987,0.00017163063,0.0054843007,0.00000691837],"about_ca_topic_score_codex":0.00021056662,"about_ca_topic_score_gemma":0.00036033074,"teacher_disagreement_score":0.0018615766,"about_ca_system_score_codex":0.00025872275,"about_ca_system_score_gemma":0.00009463861,"threshold_uncertainty_score":0.006227553},"labels":[],"label_agreement":null},{"id":"W2107750620","doi":"10.1074/jbc.m111.241786","title":"Anti-Ro52 Autoantibodies from Patients with Sjögren's Syndrome Inhibit the Ro52 E3 Ligase Activity by Blocking the E3/E2 Interface","year":2011,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University; University of Toronto","funders":"Reumatikerförbundet; National Cancer Institute; Vetenskapsrådet; Stockholms Läns Landsting; Cancerfonden; Stiftelsen för Strategisk Forskning; VINNOVA; Karolinska Institutet; University of Minnesota","keywords":"Ubiquitin ligase; Autoantibody; Ribonucleoprotein; Biology; Ubiquitin; Immunology; Cell biology; Biochemistry; Antibody; Gene; RNA","score_opus":0.01657882275965305,"score_gpt":0.21779534126200953,"score_spread":0.20121651850235647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107750620","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978161,0.0008862038,0.00036021767,0.00006676702,0.000017960281,0.000010795276,0.00010615517,0.000031736618,0.0007040076],"genre_scores_gemma":[0.9987496,0.00022842489,0.00025590352,0.00009245506,0.000017853388,0.000008209595,0.00026924605,0.0000062158615,0.00037205525],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980587,0.000034288572,0.00002718561,0.00004623158,0.000039064857,0.000047416117],"domain_scores_gemma":[0.9998037,0.0000485218,0.000047795424,0.000020187677,0.000022895892,0.00005689428],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018766246,0.00072505686,0.00044073944,0.0004055966,0.00018944628,0.00020686896,0.00015981149,0.0005128451,0.0024363582],"category_scores_gemma":[0.00038323607,0.00022879314,0.00034596736,0.00019263868,0.0001745345,0.00015596703,0.00017577458,0.00041941056,0.00065096637],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010064051,0.00026675907,0.036096647,0.0001514563,0.00017045345,0.0036022144,0.00011529345,0.00019368916,0.9466767,0.00008508416,0.0005255646,0.011109837],"study_design_scores_gemma":[0.00047643261,0.0037269786,0.72196615,0.00004409301,0.00031324933,0.035435557,0.00018317261,0.0023524014,0.22822757,0.00018933494,0.007049737,0.00003530568],"about_ca_topic_score_codex":0.0005212839,"about_ca_topic_score_gemma":0.000543828,"teacher_disagreement_score":0.0024363582,"about_ca_system_score_codex":0.00018433055,"about_ca_system_score_gemma":0.00007937067,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W2107801397","doi":"10.1016/s0896-6273(04)00003-0","title":"Cytosolic Phospholipase A2 Plays a Key Role in the Pathogenesis of Multiple Sclerosis-like Disease","year":2004,"lang":"en","type":"article","venue":"Neuron","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":184,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Multiple Sclerosis Society of Canada","keywords":"Multiple sclerosis; Experimental autoimmune encephalomyelitis; Myelin; Phospholipase A2; Immunology; Encephalomyelitis; Chemokine; Pathogenesis; Neuroscience; Central nervous system; Cytokine; Demyelinating disease; Biology; Inflammation; Enzyme; Biochemistry","score_opus":0.01966032944387398,"score_gpt":0.21809846944508388,"score_spread":0.1984381400012099,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107801397","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92413324,0.0599765,0.0049743154,0.0024136887,0.0002741484,0.000031506697,0.0003600064,0.0001692286,0.007667289],"genre_scores_gemma":[0.9872773,0.008019001,0.00081507175,0.00012122101,0.00017579198,0.000017554948,0.000119608274,0.00000863843,0.0034456614],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998944,0.000032956003,0.000010148554,0.000019159612,0.000022138296,0.00002113991],"domain_scores_gemma":[0.99992096,0.000017408562,0.000022174301,0.000008268848,0.000013489034,0.000017692622],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038047438,0.00059849734,0.00035080945,0.00043452237,0.00030572762,0.0006766017,0.00023874921,0.0006254522,0.0014908378],"category_scores_gemma":[0.0002080943,0.00011759066,0.00018738925,0.00023655765,0.0005244846,0.0005002872,0.0003937009,0.00070569396,0.00026983858],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0069124387,0.00022883512,0.01030219,0.00080503745,0.00013564632,0.003718054,0.00020596705,0.0009843992,0.9224007,0.008457371,0.002789566,0.043059766],"study_design_scores_gemma":[0.0012038331,0.0025346966,0.15069145,0.00044153226,0.00053988263,0.014915551,0.0014645493,0.008780854,0.7117701,0.025317226,0.082245104,0.000095194584],"about_ca_topic_score_codex":0.00038047458,"about_ca_topic_score_gemma":0.0003406847,"teacher_disagreement_score":0.0014908378,"about_ca_system_score_codex":0.00054338365,"about_ca_system_score_gemma":0.00023473933,"threshold_uncertainty_score":0.0049872994},"labels":[],"label_agreement":null},{"id":"W2109105309","doi":"10.1053/j.gastro.2009.10.046","title":"Cell-Type Specific Gene Expression Signature in Liver Underlies Response to Interferon Therapy in Chronic Hepatitis C Infection","year":2009,"lang":"en","type":"article","venue":"Gastroenterology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":105,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"ISG15; Interferon; Genotype; Phenotype; Biology; Immunology; Interferon-stimulated gene; Ribavirin; Gene expression; Liver biopsy; Gene; Gene expression profiling; Hepatitis C virus; Virology; Virus; Medicine; Biopsy; Internal medicine; Immune system; Genetics; Innate immune system","score_opus":0.011843600973593325,"score_gpt":0.23903333686597414,"score_spread":0.2271897358923808,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109105309","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999009,0.0002561175,0.00019718768,0.000022908738,0.0000067213928,0.000009405548,0.00010750917,0.000005376997,0.0003857764],"genre_scores_gemma":[0.9992416,0.0001280631,0.00016330418,0.000025723506,0.0000124902845,0.000012482009,0.00012652042,0.0000042028446,0.0002856489],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99985814,0.000044171895,0.000009875558,0.000020137051,0.000022753035,0.000044872035],"domain_scores_gemma":[0.99975544,0.00007220882,0.000059682057,0.000021150281,0.000036818103,0.000054630666],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022980734,0.00015045833,0.00037582713,0.0004627873,0.00016594602,0.0003623969,0.000080971346,0.00024996503,0.00079964806],"category_scores_gemma":[0.0004394804,0.00013733945,0.0001800189,0.0003069282,0.0002453599,0.00014181348,0.00016800032,0.00029026959,0.00016805672],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004342316,0.0000780969,0.07805698,0.0000661031,0.000039653674,0.00025593952,0.00017805846,0.0001668632,0.9101036,0.000116309784,0.00008839164,0.0065076537],"study_design_scores_gemma":[0.000042975786,0.0006609755,0.9433568,0.0000103832035,0.00006926867,0.0004603577,0.00036064815,0.0013888195,0.052938744,0.00022038724,0.00047807282,0.000012626775],"about_ca_topic_score_codex":0.00044549606,"about_ca_topic_score_gemma":0.00055582204,"teacher_disagreement_score":0.00079964806,"about_ca_system_score_codex":0.00021822001,"about_ca_system_score_gemma":0.0001312634,"threshold_uncertainty_score":0.002675116},"labels":[],"label_agreement":null},{"id":"W2109513727","doi":"10.1128/jvi.01635-10","title":"RIG-I-Mediated Antiviral Signaling Is Inhibited in HIV-1 Infection by a Protease-Mediated Sequestration of RIG-I","year":2010,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":193,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"McGill University; Canadian Institutes of Health Research; Canadian Foundation for AIDS Research","keywords":"Biology; RIG-I; Interferon; Provirus; RNA; Cell biology; Cytoplasm; Viral replication; Virology; MDA5; Small interfering RNA; Molecular biology; Virus; RNA interference; Gene; Biochemistry","score_opus":0.006719222005369119,"score_gpt":0.24225205932406388,"score_spread":0.23553283731869476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109513727","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99053043,0.004955548,0.002756425,0.00011346136,0.000025338582,0.000018546201,0.00024658378,0.00007062917,0.0012830008],"genre_scores_gemma":[0.9956031,0.0011502518,0.0015925461,0.0000327025,0.0000076289916,0.000019121244,0.0003185929,0.000008925382,0.0012672056],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998179,0.000036173617,0.000017420716,0.000028006732,0.00004424166,0.0000563404],"domain_scores_gemma":[0.9999335,0.000011989058,0.000018633804,0.000015748728,0.000006155767,0.000013923104],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015655828,0.00029682234,0.00025841658,0.00012041276,0.00016686186,0.0004514808,0.00025782126,0.00024701635,0.0008734268],"category_scores_gemma":[0.00011909022,0.00019618058,0.00027194142,0.00013124889,0.0002217244,0.00020813955,0.0001986161,0.00059300516,0.00048261252],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052260282,0.000008854377,0.000070622234,0.000022633008,0.0000029471594,0.0000261168,0.000005553698,0.000031322263,0.9991736,0.00008472575,0.000014640797,0.0005066924],"study_design_scores_gemma":[0.000011138201,0.000078908975,0.0028904916,0.0000056984854,0.000008369332,0.00027623092,0.000012838979,0.00087314553,0.9944675,0.000057731206,0.0013143942,0.00000340575],"about_ca_topic_score_codex":0.0003640205,"about_ca_topic_score_gemma":0.00034899334,"teacher_disagreement_score":0.0008734268,"about_ca_system_score_codex":0.00033562232,"about_ca_system_score_gemma":0.00024805998,"threshold_uncertainty_score":0.0029218793},"labels":[],"label_agreement":null},{"id":"W2109818351","doi":"10.1051/medsci/2009252138","title":"Les cytokines préviennent les tumeurs<i>via</i>un mécanisme de sénescence cellulaire","year":2009,"lang":"fr","type":"article","venue":"médecine/sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Political science","score_opus":0.028400625889366714,"score_gpt":0.2826375174433394,"score_spread":0.2542368915539727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109818351","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89398986,0.05207708,0.009779046,0.0022029844,0.0008767899,0.00013939898,0.00055607257,0.0001803004,0.04019847],"genre_scores_gemma":[0.903185,0.020958068,0.0068137622,0.00077608944,0.0002983028,0.00015645796,0.0006481168,0.00006086738,0.067103356],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998068,0.000047815494,0.000014372433,0.00005063769,0.00004877992,0.00003156014],"domain_scores_gemma":[0.9998586,0.00003163747,0.000031689655,0.00001607078,0.000038274702,0.000023675135],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003081388,0.00041535537,0.00033248603,0.00028654138,0.00045351608,0.0015223519,0.00014006575,0.0005505017,0.0075956583],"category_scores_gemma":[0.00021137203,0.00022514998,0.00041379154,0.00016547406,0.0004845183,0.00045678328,0.00025357332,0.0008682912,0.0016577541],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039398082,0.00006534088,0.002244134,0.00027780322,0.000022730677,0.00020978811,0.00015025272,0.00013152378,0.9781684,0.0023721186,0.0006557999,0.015308094],"study_design_scores_gemma":[0.00008004609,0.0012526301,0.01650148,0.00017173623,0.000084692394,0.00078760507,0.00049178983,0.00059917715,0.894554,0.0012409806,0.084214374,0.000021367854],"about_ca_topic_score_codex":0.0011022415,"about_ca_topic_score_gemma":0.0020696023,"teacher_disagreement_score":0.0075956583,"about_ca_system_score_codex":0.0005893144,"about_ca_system_score_gemma":0.0005192415,"threshold_uncertainty_score":0.025409997},"labels":[],"label_agreement":null},{"id":"W2110110657","doi":"10.1128/jvi.01219-10","title":"Proteasome Inhibition<i>In Vivo</i>Promotes Survival in a Lethal Murine Model of Severe Acute Respiratory Syndrome","year":2010,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research; University of Toronto","keywords":"Biology; MG132; Proteasome; Proteasome inhibitor; Viral replication; In vivo; Interferon; Virology; Virus; Cell biology","score_opus":0.013596857506636641,"score_gpt":0.25098902603926904,"score_spread":0.2373921685326324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2110110657","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9894142,0.00333833,0.0031363461,0.0004578701,0.00022536414,0.00007808665,0.0007358695,0.00040178682,0.0022120783],"genre_scores_gemma":[0.9931098,0.0016465042,0.0018219152,0.0001387285,0.000053389813,0.000085458865,0.00085567444,0.0000366047,0.0022518279],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997732,0.0000440604,0.00002606497,0.000040350933,0.00003905267,0.000077228106],"domain_scores_gemma":[0.99984074,0.000015338639,0.00005971248,0.00002020923,0.000015287436,0.000048764505],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024790678,0.00074637565,0.0006695352,0.00027343346,0.00020901878,0.000386207,0.00027982335,0.00042496054,0.0010752149],"category_scores_gemma":[0.00012205524,0.0002001848,0.0004123191,0.0001765617,0.000369351,0.000297689,0.00013487478,0.001193849,0.00040558793],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012107444,0.00036760862,0.00015680902,0.000075674296,0.000019468156,0.00005487024,0.000014870914,0.00015427945,0.9953492,0.00009592758,0.0002296844,0.0022707758],"study_design_scores_gemma":[0.00013527964,0.0041385856,0.0026528544,0.000016522987,0.000029961693,0.00020826951,0.000029102526,0.001266307,0.98950255,0.000067956214,0.001943499,0.000009075954],"about_ca_topic_score_codex":0.0005297993,"about_ca_topic_score_gemma":0.00078232493,"teacher_disagreement_score":0.0010752149,"about_ca_system_score_codex":0.0003046856,"about_ca_system_score_gemma":0.0003034874,"threshold_uncertainty_score":0.003596902},"labels":[],"label_agreement":null},{"id":"W2110719003","doi":"10.1038/nature06730","title":"Translational control of the innate immune response through IRF-7","year":2008,"lang":"en","type":"article","venue":"Nature","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":313,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute; McGill University","funders":"National Cancer Institute; Terry Fox Foundation; Howard Hughes Medical Institute","keywords":"Innate immune system; Immune system; Biology; Immunology","score_opus":0.008736107069053388,"score_gpt":0.24516655821840366,"score_spread":0.23643045114935027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2110719003","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91173375,0.01818314,0.03115929,0.004464907,0.0013001832,0.00005937223,0.0010454712,0.00090218545,0.031151667],"genre_scores_gemma":[0.9867877,0.0022714364,0.0035048954,0.0003788682,0.00014871583,0.000022270908,0.0006433644,0.00008762669,0.0061552357],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996039,0.00007497275,0.000018943969,0.000070532544,0.00009871084,0.00013300033],"domain_scores_gemma":[0.9997428,0.000050085022,0.000059182537,0.0000585206,0.000043554726,0.000045902034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006452638,0.00039611914,0.00026869,0.0002680051,0.00039260052,0.00074430165,0.00045854296,0.0004354448,0.0038554643],"category_scores_gemma":[0.0003564383,0.00018983541,0.0005490397,0.00013528296,0.00052742235,0.00059061754,0.000512841,0.0015028422,0.0015964007],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044944798,0.00007005634,0.0005409016,0.00008660974,0.000015099912,0.00012920955,0.000056215562,0.0002991122,0.9754917,0.007197761,0.0011382821,0.014525649],"study_design_scores_gemma":[0.000097059754,0.00034725835,0.012881989,0.000064902604,0.000038881535,0.0005423827,0.00021658168,0.003941266,0.95430607,0.00733673,0.020195115,0.000031816824],"about_ca_topic_score_codex":0.00021061761,"about_ca_topic_score_gemma":0.00043023357,"teacher_disagreement_score":0.0038554643,"about_ca_system_score_codex":0.00050934777,"about_ca_system_score_gemma":0.00046163073,"threshold_uncertainty_score":0.012897849},"labels":[],"label_agreement":null},{"id":"W2110916162","doi":"10.1530/jme-11-0025","title":"Identification of functional CCAAT/enhancer-binding protein and Ets protein binding sites in the human chorionic somatomammotropin enhancer sequences","year":2011,"lang":"en","type":"article","venue":"Journal of Molecular Endocrinology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Canadian Institutes of Health Research","keywords":"Enhancer; Ccaat-enhancer-binding proteins; Binding site; Molecular biology; Identification (biology); Biology; Chemistry; Genetics; DNA-binding protein; Gene; Gene expression; Transcription factor","score_opus":0.02657010878509781,"score_gpt":0.2691473817878045,"score_spread":0.2425772730027067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2110916162","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99518615,0.0010865538,0.002247316,0.000043481512,0.000010759884,0.00004342979,0.00051132607,0.000029427967,0.00084165204],"genre_scores_gemma":[0.9904862,0.00039327767,0.004827186,0.000070973,0.00001617581,0.000057304052,0.002541412,0.000012539552,0.0015949901],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991655,0.000009629182,0.000004309806,0.000023375775,0.000027253805,0.000018899938],"domain_scores_gemma":[0.99989164,0.000028668905,0.00002099279,0.000008704735,0.000010487284,0.000039517272],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010782251,0.00022794004,0.00021355499,0.00031163206,0.00016150391,0.00015053424,0.00012746471,0.0002422162,0.0011253008],"category_scores_gemma":[0.00022867297,0.0001637572,0.0002470533,0.00017658227,0.00021768946,0.00008263416,0.00015604738,0.0002609429,0.00051962],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031971245,0.000035375462,0.0022958918,0.00006421418,0.0000054754623,0.00023240154,0.000051020303,0.00016620588,0.993512,0.00019572598,0.0000400066,0.0030820032],"study_design_scores_gemma":[0.00015834828,0.000695921,0.22786602,0.00004861229,0.00004858235,0.0026674403,0.00015795525,0.0042022998,0.75307286,0.0007241559,0.010309828,0.0000479871],"about_ca_topic_score_codex":0.0011122831,"about_ca_topic_score_gemma":0.0016113849,"teacher_disagreement_score":0.0011253008,"about_ca_system_score_codex":0.00022028458,"about_ca_system_score_gemma":0.00031452492,"threshold_uncertainty_score":0.0037645102},"labels":[],"label_agreement":null},{"id":"W2112058351","doi":"10.1093/jhered/est091","title":"Mapping Genes to Chicken Microchromosome 16 and Discovery of Olfactory and Scavenger Receptor Genes Near the Major Histocompatibility Complex","year":2013,"lang":"en","type":"article","venue":"Journal of Heredity","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Office of Energy Research and Development; Academy of Finland","keywords":"Microchromosome; Biology; Genetics; Gene; Major histocompatibility complex; Chromosome; Karyotype","score_opus":0.02813693401292233,"score_gpt":0.24409571974172917,"score_spread":0.21595878572880683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112058351","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964311,0.0002911258,0.0022731074,0.000029868675,0.0000068126487,0.000009362687,0.000111183224,0.000020022268,0.0008272915],"genre_scores_gemma":[0.9864032,0.00041216667,0.009415381,0.000043462227,0.000010791029,0.000021996448,0.0008739055,0.000017385164,0.002801568],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989116,0.000008816574,0.000006029441,0.000051097006,0.00002005961,0.000022828885],"domain_scores_gemma":[0.9998491,0.000033679586,0.000052638108,0.000016783382,0.000011448984,0.000036336733],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000094223935,0.00027250202,0.0001362126,0.0007315658,0.00018513695,0.00017027912,0.00018798035,0.00022127118,0.00088872324],"category_scores_gemma":[0.00013701335,0.00020970506,0.0002004348,0.00021727907,0.00032370642,0.00013885999,0.00032335296,0.00026776374,0.00027275257],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060087827,0.000003450519,0.001787402,0.000015415928,0.0000032347612,0.00011528498,0.000043215376,0.00006671031,0.99590045,0.00016387644,0.000011010808,0.0018299068],"study_design_scores_gemma":[0.00005123277,0.0007458317,0.30591,0.000040282957,0.00009231481,0.0028423183,0.00030491196,0.0020673377,0.6768657,0.0007140059,0.010339913,0.000026074546],"about_ca_topic_score_codex":0.0015111313,"about_ca_topic_score_gemma":0.0039149816,"teacher_disagreement_score":0.0015111313,"about_ca_system_score_codex":0.00029927687,"about_ca_system_score_gemma":0.00016696293,"threshold_uncertainty_score":0.0030047297},"labels":[],"label_agreement":null},{"id":"W2112165299","doi":"10.1016/j.molimm.2009.12.012","title":"Temperature and length-dependent modulation of the MH class IIβ gene expression in brook charr (Salvelinus fontinalis) by a cis-acting minisatellite","year":2010,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Université de Montréal","funders":"Université de Montréal; Université Laval","keywords":"Minisatellite; Biology; Genetics; Gene; Allele; Salvelinus; Major histocompatibility complex; Phenotype; Microsatellite; Trout","score_opus":0.004217058205961749,"score_gpt":0.21308200865457957,"score_spread":0.20886495044861783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112165299","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99945,0.000105871244,0.00012909294,0.000024141335,0.0000045158226,0.0000019305414,0.000075118645,0.000010175001,0.00019905608],"genre_scores_gemma":[0.9980228,0.00006641204,0.00016996506,0.000034367018,0.00000695956,0.000011805239,0.0003155273,0.000023515167,0.0013486353],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999051,0.000016454946,0.0000069150474,0.000031148425,0.000015753914,0.000024601808],"domain_scores_gemma":[0.99972934,0.000060727787,0.000078313096,0.000034724057,0.000025269157,0.000071640374],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011503129,0.00027231892,0.000206739,0.00025697506,0.00017594594,0.0002656714,0.00023317298,0.00020864363,0.00097499596],"category_scores_gemma":[0.00016386968,0.0001964269,0.00021440352,0.00009213286,0.00036956076,0.00021203634,0.0002773971,0.00047072791,0.00023128474],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021493752,0.0000101576225,0.00031886567,0.000004648024,0.000002765807,0.00001285074,0.000022671473,0.000017065297,0.9991875,0.000013305292,0.00000814054,0.00018715333],"study_design_scores_gemma":[0.00006546226,0.0009804982,0.20928985,0.000011257224,0.00005281343,0.0002756156,0.00039421496,0.001967625,0.785402,0.00016984298,0.0013512626,0.00003959],"about_ca_topic_score_codex":0.0017270395,"about_ca_topic_score_gemma":0.0026291308,"teacher_disagreement_score":0.0017270395,"about_ca_system_score_codex":0.00048650068,"about_ca_system_score_gemma":0.00015813678,"threshold_uncertainty_score":0.0035299063},"labels":[],"label_agreement":null},{"id":"W2112263915","doi":"10.1128/jvi.03801-13","title":"Protein Interferon-Stimulated Gene 15 Conjugation Delays but Does Not Overcome Coronavirus Proliferation in a Model of Fulminant Hepatitis","year":2014,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research; Wellcome Trust","keywords":"ISG15; Biology; Interferon-stimulated gene; Interferon; Virology; Viral replication; Mouse hepatitis virus; Coronavirus; Gene knockdown; Innate immune system; Molecular biology; Ubiquitin; Virus; Gene; Immune system; Immunology","score_opus":0.018120731872788863,"score_gpt":0.2565921702242837,"score_spread":0.23847143835149484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112263915","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99622345,0.0009299168,0.0014965034,0.00017126018,0.00010395472,0.00006374856,0.00023884414,0.00012320372,0.00064913114],"genre_scores_gemma":[0.99344903,0.00069172616,0.0023172875,0.00010970436,0.000032984866,0.0001293172,0.0004310915,0.000033178643,0.002805697],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998099,0.000034732784,0.00002347891,0.00003724504,0.00004100531,0.00005360494],"domain_scores_gemma":[0.999777,0.000028634417,0.00007954756,0.000026561649,0.000013758454,0.000074642834],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023663165,0.0006441142,0.00047207213,0.00029547472,0.0001819607,0.0002548674,0.0003420726,0.0005443795,0.0012358068],"category_scores_gemma":[0.00012936263,0.0001579505,0.00034280666,0.00013687454,0.0004922356,0.00032420797,0.0001958324,0.0010437046,0.0003383426],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008274649,0.00022390069,0.00018394344,0.000050814455,0.0000073158467,0.000072258204,0.000016707807,0.00006474639,0.996651,0.00009663648,0.00007028637,0.00173492],"study_design_scores_gemma":[0.00014220874,0.004775971,0.0018977111,0.0000140874345,0.00002472509,0.0004158093,0.000027872247,0.0006725404,0.98991346,0.000058612393,0.002051022,0.000005927161],"about_ca_topic_score_codex":0.00029604515,"about_ca_topic_score_gemma":0.00046966257,"teacher_disagreement_score":0.0012358068,"about_ca_system_score_codex":0.00037705406,"about_ca_system_score_gemma":0.000270466,"threshold_uncertainty_score":0.004134178},"labels":[],"label_agreement":null},{"id":"W2113990092","doi":"10.1016/j.celrep.2013.02.027","title":"UBXN1 Interferes with Rig-I-like Receptor-Mediated Antiviral Immune Response by Targeting MAVS","year":2013,"lang":"en","type":"article","venue":"Cell Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Howard Hughes Medical Institute","keywords":"Biology; Vesicular stomatitis virus; Innate immune system; TLR3; Viral replication; RIG-I; Virology; Interferon; Sendai virus; RNA virus; Cell biology; RNA; Virus; Immune system; Signal transducing adaptor protein; Pattern recognition receptor; Signal transduction; Toll-like receptor; Immunology; Genetics; Gene","score_opus":0.004455098920809896,"score_gpt":0.197877003571406,"score_spread":0.1934219046505961,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2113990092","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951525,0.0015790497,0.0015800388,0.000116322226,0.000039273717,0.000023349978,0.00022405601,0.00005778519,0.0012276028],"genre_scores_gemma":[0.9957087,0.0007264311,0.0011973307,0.000043400083,0.000012120395,0.000033184253,0.00032478003,0.0000099520485,0.0019441703],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998259,0.000049912658,0.00002164371,0.000025059346,0.00003364555,0.00004390216],"domain_scores_gemma":[0.99991333,0.000021642421,0.000018945135,0.000014919128,0.000006786569,0.000024315204],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025399312,0.0004797941,0.00032632687,0.00014901116,0.0001980091,0.00026694068,0.00022583109,0.00027521534,0.0010052894],"category_scores_gemma":[0.0001478665,0.00009900704,0.00015630142,0.00010872997,0.00028049163,0.00020272836,0.00016280595,0.000521466,0.00021641486],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003587121,0.00009712105,0.00023738098,0.000041892315,0.0000081649805,0.000039946262,0.000012714737,0.000116447816,0.9974095,0.00013210943,0.00007381544,0.0014722118],"study_design_scores_gemma":[0.00001492584,0.00029358367,0.0012302956,0.0000030390415,0.0000066137072,0.00008431722,0.0000090589565,0.00047239,0.9970867,0.000024692145,0.00077263144,0.0000017217579],"about_ca_topic_score_codex":0.00031101884,"about_ca_topic_score_gemma":0.0005568131,"teacher_disagreement_score":0.0010052894,"about_ca_system_score_codex":0.00029733585,"about_ca_system_score_gemma":0.00022716592,"threshold_uncertainty_score":0.0033630133},"labels":[],"label_agreement":null},{"id":"W2115261304","doi":"10.1128/jvi.05989-11","title":"IκB Kinase ε-Dependent Phosphorylation and Degradation of X-Linked Inhibitor of Apoptosis Sensitizes Cells to Virus-Induced Apoptosis","year":2011,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer; McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research; Terry Fox Foundation","keywords":"XIAP; Inhibitor of apoptosis; Phosphorylation; IκB kinase; Apoptosis; Biology; Inhibitor of apoptosis domain; IRF3; Ubiquitin ligase; Cell biology; Caspase; Molecular biology; IκBα; Signal transduction; Kinase; Cancer research; Ubiquitin; Transcription factor; NF-κB; Programmed cell death; Biochemistry","score_opus":0.023109821202814844,"score_gpt":0.23936710024100116,"score_spread":0.2162572790381863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115261304","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994896,0.0015402996,0.0016194766,0.000073922034,0.000040432184,0.000021170637,0.00013496133,0.00007232135,0.0016013901],"genre_scores_gemma":[0.9970696,0.00071031303,0.00062435423,0.000032439264,0.000008409817,0.000020049185,0.00023040878,0.000009450137,0.001294969],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998944,0.000020846292,0.000011348134,0.0000141128685,0.00002513071,0.000034198856],"domain_scores_gemma":[0.9999331,0.000012138524,0.000016626813,0.000017590412,0.000005450243,0.000015149255],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001345662,0.0003163449,0.00023985236,0.00018676653,0.000115622264,0.00024444482,0.00011727598,0.00017006883,0.0018813593],"category_scores_gemma":[0.000104472325,0.00013754966,0.00024310533,0.00011770821,0.000150292,0.00016724432,0.00015379714,0.0005924363,0.0004540871],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008911414,0.000029886069,0.00013834091,0.000020875505,0.0000048283787,0.00003350888,0.00000805707,0.00004687336,0.99861765,0.0000511921,0.00003137495,0.0009282683],"study_design_scores_gemma":[0.000024203646,0.00031328044,0.0046072067,0.000006184518,0.0000126432515,0.00037993834,0.000020586062,0.0005695049,0.9924793,0.0000639942,0.0015196803,0.0000032839212],"about_ca_topic_score_codex":0.00011858889,"about_ca_topic_score_gemma":0.00020329378,"teacher_disagreement_score":0.0018813593,"about_ca_system_score_codex":0.00019017146,"about_ca_system_score_gemma":0.00012449632,"threshold_uncertainty_score":0.0062937737},"labels":[],"label_agreement":null},{"id":"W2115616959","doi":"10.1128/jvi.05098-11","title":"Varicella-Zoster Virus Immediate-Early Protein ORF61 Abrogates the IRF3-Mediated Innate Immune Response through Degradation of Activated IRF3","year":2011,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":137,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McGill University","funders":"","keywords":"IRF3; Biology; Sendai virus; Interferon; Interferon regulatory factors; Innate immune system; Varicella zoster virus; Virology; Molecular biology; Ectopic expression; MG132; Virus; Proteasome; Proteasome inhibitor; Cell biology; Immune system; Immunology; Gene; Biochemistry","score_opus":0.022136431551323305,"score_gpt":0.24401264068762613,"score_spread":0.22187620913630282,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115616959","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99636406,0.0012586309,0.001216999,0.000072154166,0.000046271012,0.00001839509,0.0001792229,0.000058221347,0.0007860865],"genre_scores_gemma":[0.99643266,0.0006907239,0.00081717933,0.000041214273,0.00001504784,0.00001893738,0.00049378007,0.000014697112,0.0014757352],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978954,0.000028996637,0.00003086352,0.00003260093,0.000048730766,0.00006925906],"domain_scores_gemma":[0.99988294,0.000024813966,0.0000328768,0.000019770441,0.000012464377,0.000027013275],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018051497,0.00037411004,0.00032103597,0.00018651933,0.0001797455,0.0002614846,0.00018956083,0.0002624912,0.001414544],"category_scores_gemma":[0.00011471285,0.000141822,0.00038384102,0.00010747689,0.00024761527,0.0002295739,0.00017216905,0.0005504959,0.00037212754],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013695452,0.000042536856,0.00007370549,0.000032370208,0.000004681998,0.00003422662,0.00000953493,0.000024640827,0.9989517,0.000050347262,0.000016858334,0.0006224078],"study_design_scores_gemma":[0.00001971598,0.0003172187,0.0025077881,0.0000044102694,0.000013786581,0.00013019834,0.00001815386,0.00044123014,0.9953537,0.00003675601,0.0011535692,0.000003529881],"about_ca_topic_score_codex":0.00043581706,"about_ca_topic_score_gemma":0.00046989095,"teacher_disagreement_score":0.001414544,"about_ca_system_score_codex":0.00022087891,"about_ca_system_score_gemma":0.00018858767,"threshold_uncertainty_score":0.0047320724},"labels":[],"label_agreement":null},{"id":"W2115889074","doi":"10.1101/gr.20102","title":"Functional Diversity of Mx Proteins: Variations on a Theme of Host Resistance to Infection","year":2002,"lang":"en","type":"review","venue":"Genome Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":136,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Biology; Host (biology); Diversity (politics); Resistance (ecology); Genetics; Evolutionary biology; Theme (computing); Computational biology; Ecology; Anthropology; World Wide Web","score_opus":0.1748822063311278,"score_gpt":0.36885086523964444,"score_spread":0.19396865890851664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115889074","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9620961,0.024125269,0.00728404,0.0006894763,0.00007432984,0.000031973745,0.00047209178,0.00017449108,0.005052335],"genre_scores_gemma":[0.99003285,0.004071515,0.003247612,0.00021964163,0.00012010189,0.000030084375,0.00047708198,0.00004845406,0.0017525293],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99973506,0.000045653924,0.000027190426,0.0000645553,0.000079897516,0.00004764447],"domain_scores_gemma":[0.99983263,0.00002670896,0.00004435469,0.000021800923,0.000019872676,0.00005459639],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004558783,0.0002893597,0.00040123425,0.00058255735,0.00020929117,0.0007408723,0.00030486286,0.0004790031,0.001222557],"category_scores_gemma":[0.00026763257,0.00013649891,0.00037079485,0.000301222,0.00045220915,0.00063869543,0.0007385066,0.0009816085,0.0003255463],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003509732,0.000021740514,0.003192324,0.00015859176,0.000036092082,0.00017699803,0.00023733839,0.00014642577,0.97369224,0.0029013478,0.00019321087,0.018892713],"study_design_scores_gemma":[0.000201277,0.0020307023,0.23265618,0.00017215905,0.00025425438,0.023599392,0.0005956508,0.00308874,0.60493666,0.012959864,0.11935535,0.00014974349],"about_ca_topic_score_codex":0.000051063522,"about_ca_topic_score_gemma":0.000032808002,"teacher_disagreement_score":0.001222557,"about_ca_system_score_codex":0.00024173818,"about_ca_system_score_gemma":0.000074766045,"threshold_uncertainty_score":0.0040898323},"labels":[],"label_agreement":null},{"id":"W2116510961","doi":"10.1128/jvi.00862-11","title":"Membrane Perturbation Elicits an IRF3-Dependent, Interferon-Independent Antiviral Response","year":2011,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"IRF3; Biology; Interferon; Innate immune system; Lipid bilayer fusion; Viral envelope; Virus; Virology; Transmembrane protein; Cell biology; Antiviral protein; Interferon regulatory factors; Viral entry; Immune system; Viral replication; Immunology; RNA; Gene; Receptor; Biochemistry","score_opus":0.02833331113360998,"score_gpt":0.25971196488851234,"score_spread":0.23137865375490235,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2116510961","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965532,0.0003178046,0.001993683,0.00007192347,0.000017041988,0.000019719606,0.00019345102,0.000041022904,0.0007922722],"genre_scores_gemma":[0.9972199,0.00015561839,0.0016204715,0.000047277783,0.000006705607,0.000018159231,0.00026471502,0.000009969568,0.0006572524],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997795,0.000043183216,0.000015335972,0.000029508417,0.000050505216,0.000081896644],"domain_scores_gemma":[0.9998405,0.00004718733,0.000032525102,0.00003094278,0.000022193144,0.000026581709],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002507867,0.0003611813,0.00024704507,0.00013810124,0.00018252092,0.00028561242,0.000110050416,0.00037516042,0.0014541355],"category_scores_gemma":[0.0002338634,0.00013106616,0.0003126963,0.00008291042,0.0001990375,0.00025170966,0.00031957295,0.0006525317,0.00047059424],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054280357,0.000009244989,0.00010779907,0.00000879694,0.0000015183732,0.00002021916,0.000004804331,0.000019602858,0.9994223,0.000042578737,0.000011649785,0.00029713454],"study_design_scores_gemma":[0.000012937069,0.00018128623,0.0038282266,0.0000042058796,0.0000063378984,0.00026787794,0.000039244125,0.0009437639,0.9938273,0.0001104691,0.0007734912,0.0000049364166],"about_ca_topic_score_codex":0.0001986424,"about_ca_topic_score_gemma":0.00030045104,"teacher_disagreement_score":0.0014541355,"about_ca_system_score_codex":0.00042187882,"about_ca_system_score_gemma":0.0001693405,"threshold_uncertainty_score":0.0048645735},"labels":[],"label_agreement":null},{"id":"W2117096084","doi":"10.1158/1535-7163.mct-08-0753","title":"UBE1L causes lung cancer growth suppression by targeting cyclin D1","year":2008,"lang":"en","type":"article","venue":"Molecular Cancer Therapeutics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Immunovaccine (Canada)","funders":"National Cancer Institute","keywords":"Cyclin D1; Cancer research; Cyclin B; Cyclin D; Cyclin; Biology; Cyclin A; Cyclin A2; Cyclin E; Cell cycle; Gene knockdown; Molecular biology; Cancer; Biochemistry; Apoptosis; Genetics","score_opus":0.01612231471546178,"score_gpt":0.2856829874855768,"score_spread":0.26956067277011503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117096084","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922948,0.0023919374,0.0017280198,0.00029292353,0.00011847648,0.00007834618,0.00065440376,0.00024254194,0.002198534],"genre_scores_gemma":[0.9927965,0.0010092825,0.0009180293,0.00010463263,0.000015339752,0.000060030136,0.00068985194,0.000023490904,0.0043827086],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998104,0.00002661642,0.000021262395,0.00004360339,0.000043926604,0.00005418545],"domain_scores_gemma":[0.9998988,0.000017206612,0.000025570916,0.000016642678,0.000009544698,0.000032174798],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021803885,0.00034629274,0.00040533414,0.00029033463,0.00021584917,0.00033754858,0.00026698853,0.00039808685,0.0018708613],"category_scores_gemma":[0.00011008747,0.00016262736,0.0003237169,0.00019153829,0.00032909308,0.00014765278,0.0001499712,0.000934593,0.00041361587],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00059077423,0.0003031163,0.00020381244,0.000069646376,0.000012140492,0.00007667292,0.0000144694495,0.00011272405,0.9948632,0.0001482254,0.0001807065,0.003424674],"study_design_scores_gemma":[0.000090162015,0.001370462,0.0019271121,0.0000043781147,0.00002428963,0.000228344,0.000015098296,0.00069138524,0.992265,0.00003384709,0.0033465822,0.0000034800676],"about_ca_topic_score_codex":0.000655473,"about_ca_topic_score_gemma":0.0008399956,"teacher_disagreement_score":0.0018708613,"about_ca_system_score_codex":0.0004807658,"about_ca_system_score_gemma":0.00032745724,"threshold_uncertainty_score":0.0062586665},"labels":[],"label_agreement":null},{"id":"W2118694630","doi":"10.1128/jvi.00232-15","title":"Influenza A Virus Panhandle Structure Is Directly Involved in RIG-I Activation and Interferon Induction","year":2015,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":111,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research","keywords":"Biology; RIG-I; RNA; Transcription (linguistics); Viral replication; Interferon; Influenza A virus; Virology; Virus; Gene; Cell biology; Genetics","score_opus":0.031689669619069986,"score_gpt":0.2827246108566988,"score_spread":0.2510349412376288,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118694630","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98802453,0.0047686854,0.0054918835,0.00007057766,0.000051611834,0.00002644109,0.0002505928,0.00007875924,0.0012370008],"genre_scores_gemma":[0.9953904,0.0006718048,0.0024901412,0.0000453356,0.000013669795,0.00001568413,0.0005060659,0.000010724205,0.00085627014],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981636,0.00003557014,0.00001958442,0.000052542196,0.00003751589,0.000038491024],"domain_scores_gemma":[0.99986184,0.00003246503,0.00004300056,0.000022543049,0.0000156946,0.000024351242],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014110883,0.00041410723,0.00019201792,0.00008661545,0.00016288202,0.00026925135,0.00016742908,0.0003420268,0.001223108],"category_scores_gemma":[0.00012357956,0.000097827935,0.0003204064,0.00007123088,0.0002696056,0.00022045267,0.00023815219,0.00038290667,0.0004939512],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000077191246,0.000007909012,0.00019394331,0.000026915337,0.000002827553,0.00003394205,0.000004498188,0.000027255028,0.99912065,0.000038288497,0.0000064899496,0.0004600098],"study_design_scores_gemma":[0.00000688072,0.00025171426,0.0050537814,0.000008376866,0.000015181222,0.0003954236,0.00002165663,0.00058313104,0.9921595,0.000059721726,0.0014402864,0.000004439223],"about_ca_topic_score_codex":0.00022452381,"about_ca_topic_score_gemma":0.0002490133,"teacher_disagreement_score":0.001223108,"about_ca_system_score_codex":0.0002120155,"about_ca_system_score_gemma":0.00019124175,"threshold_uncertainty_score":0.0040917397},"labels":[],"label_agreement":null},{"id":"W2119569986","doi":"10.1002/hep.23640","title":"Tissue Macrophages Suppress Viral Replication and Prevent Severe Immunopathology in an Interferon-I-Dependent Manner in Mice","year":2010,"lang":"en","type":"article","venue":"Hepatology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research","funders":"Canadian Institutes of Health Research; Deutsche Forschungsgemeinschaft; National Institutes of Health; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"Immunopathology; Immunology; Interferon; Virology; Viral replication; Replication (statistics); Macrophage; Viral disease; Interferon alfa; Biology; Medicine; Human immunodeficiency virus (HIV); Alpha interferon; Virus; Genetics; In vitro","score_opus":0.008118754546808084,"score_gpt":0.2734602279906313,"score_spread":0.2653414734438232,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2119569986","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9869472,0.0038337405,0.0047873654,0.000349783,0.000107707805,0.0001829877,0.00053402875,0.0006632633,0.002594052],"genre_scores_gemma":[0.9856425,0.0017140477,0.004641897,0.00030470316,0.000063269734,0.00030611167,0.0006389186,0.00014895322,0.0065396316],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99950635,0.00008929268,0.00003735345,0.00008630048,0.00007432532,0.00020644839],"domain_scores_gemma":[0.9994973,0.00005753988,0.00018139921,0.000067908884,0.000046234945,0.00014969183],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054411497,0.0016294399,0.0006301389,0.0008472493,0.00035731113,0.00048694885,0.00052064576,0.0009888912,0.0014515574],"category_scores_gemma":[0.00023572416,0.00043103512,0.00048968906,0.00015960984,0.00071121514,0.000488728,0.00034768225,0.0014291356,0.0009591796],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008638616,0.00043598158,0.00035366343,0.00008333235,0.000013790158,0.0001279597,0.00004425199,0.000106514286,0.9944306,0.00020160283,0.00012280699,0.0032155865],"study_design_scores_gemma":[0.00051269727,0.004972985,0.00422525,0.000053424792,0.000058901594,0.0006644123,0.00006527664,0.0009183438,0.9848409,0.00022647632,0.0034460416,0.000015223479],"about_ca_topic_score_codex":0.0003142815,"about_ca_topic_score_gemma":0.0004460857,"teacher_disagreement_score":0.0016294399,"about_ca_system_score_codex":0.00041364445,"about_ca_system_score_gemma":0.00035339023,"threshold_uncertainty_score":0.004855931},"labels":[],"label_agreement":null},{"id":"W2122115865","doi":"10.1128/jvi.02069-08","title":"Differential Modification of Interferon Regulatory Factor 3 following Virus Particle Entry","year":2009,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research; McMaster University; Cleveland Clinic Foundation; Cleveland Clinic","keywords":"IRF3; Interferon regulatory factors; Biology; Interferon; Viral replication; Virology; Virus; Cell biology; Signal transduction; Innate immune system; Molecular biology; Biochemistry; Receptor","score_opus":0.01716012826874855,"score_gpt":0.2713356541518614,"score_spread":0.2541755258831128,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122115865","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9910953,0.0012237125,0.0047650137,0.00009529959,0.00006331284,0.000030151463,0.0005310566,0.00007229353,0.0021237826],"genre_scores_gemma":[0.99143046,0.0006388522,0.0042900424,0.00012694356,0.000015448777,0.00004200423,0.0012327958,0.000041344178,0.0021821237],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978465,0.000029320172,0.000016446498,0.000049287275,0.000055888475,0.00006443856],"domain_scores_gemma":[0.99981767,0.00006099452,0.000033742635,0.000024117393,0.00003119255,0.000032248332],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019724858,0.00023529415,0.00026043315,0.00021556638,0.00019394224,0.0004092414,0.00020847203,0.0003678083,0.0012987779],"category_scores_gemma":[0.00033283298,0.00012878233,0.0004018306,0.00017181269,0.00027569802,0.00033509225,0.00021850962,0.00082528306,0.000519192],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009643838,0.000008828328,0.00012118681,0.000015448119,0.000002340892,0.000024317005,0.000014574147,0.000011809293,0.9991561,0.000070533424,0.000013471956,0.00046486498],"study_design_scores_gemma":[0.0000066294656,0.00012357952,0.013216034,0.000006573873,0.000009109805,0.00018346563,0.000043531134,0.0005013259,0.9846543,0.00015508493,0.0010918962,0.0000084649955],"about_ca_topic_score_codex":0.0006202683,"about_ca_topic_score_gemma":0.00079212984,"teacher_disagreement_score":0.0012987779,"about_ca_system_score_codex":0.0004819216,"about_ca_system_score_gemma":0.00020104749,"threshold_uncertainty_score":0.0043448806},"labels":[],"label_agreement":null},{"id":"W2123566626","doi":"10.1186/1742-4690-4-68","title":"Both TRIM5α and TRIMCyp have only weak antiviral activity in canine D17 cells","year":2007,"lang":"en","type":"article","venue":"Retrovirology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Trois-Rivières","funders":"Institute of Infection and Immunity; National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Capsid; Retrovirus; Cell biology; Biology; African Green Monkey; Rhesus macaque; Virology; Tetherin; Viral replication; Virus","score_opus":0.008900560085697215,"score_gpt":0.24832772494010905,"score_spread":0.23942716485441184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123566626","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939237,0.0024609356,0.00074812834,0.000094281815,0.000024573475,0.000035166657,0.00082336634,0.000037185007,0.0018527244],"genre_scores_gemma":[0.9918864,0.0009652348,0.0013216576,0.00008716836,0.000014444147,0.00006490702,0.0029573645,0.000015507736,0.0026874326],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997576,0.000037760557,0.00004058522,0.00004579834,0.00006383028,0.00005431669],"domain_scores_gemma":[0.9997763,0.00005160344,0.000032686978,0.00004800493,0.000034897996,0.000056510682],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002250607,0.0001989546,0.0003015438,0.00021899288,0.00026135897,0.0003879294,0.00022619615,0.00025562034,0.0015298431],"category_scores_gemma":[0.00017080111,0.00011586806,0.00032104025,0.0002530135,0.00020523806,0.00014977141,0.00019151527,0.00047685916,0.00080219435],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004912846,0.000083773084,0.0028883116,0.000110512476,0.000024783218,0.00017757356,0.00011067997,0.00008935579,0.99347067,0.0001499562,0.0002558057,0.0021473088],"study_design_scores_gemma":[0.00003368955,0.00094486354,0.011728873,0.000010824104,0.00006166568,0.0009507986,0.0002607664,0.00077552506,0.9746928,0.00004755521,0.010484886,0.000007641608],"about_ca_topic_score_codex":0.0017534072,"about_ca_topic_score_gemma":0.0016509341,"teacher_disagreement_score":0.0017534072,"about_ca_system_score_codex":0.0003891844,"about_ca_system_score_gemma":0.00030239712,"threshold_uncertainty_score":0.0051178336},"labels":[],"label_agreement":null},{"id":"W2123896260","doi":"10.1128/jvi.00142-10","title":"Respiratory Syncytial Virus-Mediated NF-κB p65 Phosphorylation at Serine 536 Is Dependent on RIG-I, TRAF6, and IKKβ","year":2010,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":113,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Proinflammatory cytokine; Biology; Phosphorylation; IκB kinase; Chemokine; Cell biology; IκBα; Transactivation; Signal transduction; NF-κB; Transcription factor; Immunology; Inflammation; Biochemistry","score_opus":0.008583162289355937,"score_gpt":0.2424389063687475,"score_spread":0.23385574407939155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123896260","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9812719,0.007859842,0.0063609127,0.00018167868,0.0001016073,0.000048596256,0.0005995259,0.00013103221,0.0034448311],"genre_scores_gemma":[0.9936727,0.0023971032,0.0016188659,0.000061061306,0.000016183785,0.00003818864,0.00052308885,0.000012585628,0.0016601707],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980193,0.00002824409,0.000025852813,0.000034870343,0.00005073779,0.000058383805],"domain_scores_gemma":[0.9999161,0.0000068674894,0.000037518592,0.000010244207,0.000008933759,0.00002032177],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002463984,0.00058533374,0.0002469344,0.00018066804,0.00023097663,0.00034031758,0.0002109056,0.0001907968,0.0019488382],"category_scores_gemma":[0.00012878784,0.00015093482,0.0007813437,0.00013679,0.00024330638,0.0003016893,0.0002545619,0.00057941925,0.0006913524],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024392761,0.000024847777,0.00020888545,0.000081118254,0.000008677818,0.00009263006,0.000015944244,0.000039740953,0.99796593,0.0001029621,0.00002818956,0.0011871782],"study_design_scores_gemma":[0.000047679096,0.00037597626,0.017779656,0.00002396109,0.000035409932,0.0010165717,0.00006827462,0.00084744446,0.9766906,0.00018694591,0.002914633,0.000012794003],"about_ca_topic_score_codex":0.0003079688,"about_ca_topic_score_gemma":0.00029541334,"teacher_disagreement_score":0.0019488382,"about_ca_system_score_codex":0.00026301155,"about_ca_system_score_gemma":0.00019920497,"threshold_uncertainty_score":0.0065194964},"labels":[],"label_agreement":null},{"id":"W2123949120","doi":"10.1128/mcb.00880-08","title":"Ubiquitin-Regulated Recruitment of IκB Kinase ε to the MAVS Interferon Signaling Adapter","year":2009,"lang":"en","type":"article","venue":"Molecular and Cellular Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":82,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Jewish General Hospital","funders":"","keywords":"Biology; MDA5; Interferon; IκB kinase; Signal transducing adaptor protein; Ubiquitin; Cell biology; Signal transduction; RIG-I; Wnt signaling pathway; Interferon regulatory factors; Transcription factor; Phosphorylation; Kinase; Mitochondrion; Virology; NF-κB; Gene; RNA; Genetics; RNA interference","score_opus":0.02071146008724991,"score_gpt":0.25915427853876283,"score_spread":0.2384428184515129,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123949120","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929073,0.0016464414,0.0031752067,0.00006365608,0.000020269514,0.000010841515,0.00010474535,0.0000501916,0.0020214682],"genre_scores_gemma":[0.99701655,0.00038549546,0.00084673404,0.000026182783,0.00000502685,0.000008275481,0.00015568786,0.0000051009006,0.0015510418],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989235,0.000014795151,0.000008138758,0.000025850271,0.000025555466,0.00003342423],"domain_scores_gemma":[0.9999311,0.000005227709,0.000025509777,0.000013074401,0.000008764137,0.000016262824],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000102947,0.00021554602,0.000117851974,0.00017588573,0.00017582755,0.0003154381,0.00012414638,0.00017832418,0.0012059934],"category_scores_gemma":[0.000115660536,0.00009621557,0.00021598896,0.0001267026,0.00017021307,0.00021227807,0.00030089132,0.00023106278,0.0005871741],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008848675,0.000011741783,0.0008041428,0.000022460155,0.000004438025,0.0000622468,0.000017164673,0.00007688837,0.9969844,0.00025144144,0.000031734882,0.0016448735],"study_design_scores_gemma":[0.000015267531,0.000101497055,0.03193653,0.0000103858365,0.000010843959,0.0004046469,0.000096002776,0.0017016681,0.9619306,0.00026036476,0.00352578,0.000006318509],"about_ca_topic_score_codex":0.0003538069,"about_ca_topic_score_gemma":0.00046530977,"teacher_disagreement_score":0.0012059934,"about_ca_system_score_codex":0.00045603586,"about_ca_system_score_gemma":0.00012260195,"threshold_uncertainty_score":0.0040344},"labels":[],"label_agreement":null},{"id":"W2124292015","doi":"10.1002/ajmg.a.36360","title":"Bilateral striatal necrosis in two subjects with Aicardi–Goutières syndrome due to mutations in <i>ADAR1</i> (<i>AGS6</i>)","year":2013,"lang":"en","type":"article","venue":"American Journal of Medical Genetics Part A","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"European Commission","keywords":"Pathology; Leukoencephalopathy; Medicine; Necrosis; Atrophy; Disease","score_opus":0.007751739223034166,"score_gpt":0.26292735410327567,"score_spread":0.2551756148802415,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124292015","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982374,0.00023939773,0.00025170777,0.00012792267,0.00002198779,0.000032059972,0.000036652382,0.000021501603,0.0010313519],"genre_scores_gemma":[0.99911386,0.00012558157,0.0002305894,0.00011251928,0.00003777239,0.0000098274095,0.000045842677,0.00000846926,0.00031553893],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9996487,0.000053550822,0.0000408111,0.000119147284,0.000055994453,0.00008185703],"domain_scores_gemma":[0.99941134,0.00013511538,0.00013948714,0.000039802348,0.00005972961,0.00021458768],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033599144,0.0014720381,0.0006869933,0.0018139015,0.0017223392,0.0007281066,0.00046878832,0.0021381106,0.0015348245],"category_scores_gemma":[0.0013310532,0.00083583186,0.0005066905,0.00066695426,0.0014121709,0.0004533231,0.00096296734,0.00092152884,0.0002765832],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00053151546,0.00033389294,0.16776903,0.00009137353,0.0000864642,0.808413,0.0027779152,0.0001419005,0.015134718,0.00022213713,0.00030798712,0.004189951],"study_design_scores_gemma":[0.00011326538,0.00074887695,0.20155753,0.000030590767,0.0000932927,0.79307544,0.000843815,0.00035925186,0.0019753296,0.00038395004,0.00076875085,0.000049849532],"about_ca_topic_score_codex":0.0051858397,"about_ca_topic_score_gemma":0.004593602,"teacher_disagreement_score":0.0051858397,"about_ca_system_score_codex":0.0007320927,"about_ca_system_score_gemma":0.00045269672,"threshold_uncertainty_score":0.0103113055},"labels":[],"label_agreement":null},{"id":"W2124969332","doi":"10.1073/pnas.0703285104","title":"Double-stranded DNA and double-stranded RNA induce a common antiviral signaling pathway in human cells","year":2007,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":157,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; National Institutes of Health; McGill University","keywords":"Innate immune system; Biology; RIG-I; RNA silencing; Interferon; DNA virus; DNA; Cell biology; RNA; Signal transduction; MDA5; Nucleic acid; Virology; NS3; RNA interference; Virus; Gene; Immune system; Hepatitis C virus; Genome; Genetics","score_opus":0.04718122755722968,"score_gpt":0.31201658385134723,"score_spread":0.26483535629411753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124969332","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.969373,0.010859215,0.0092253955,0.00041187284,0.000070828224,0.00010801158,0.0006350943,0.00021751253,0.009099101],"genre_scores_gemma":[0.9875218,0.0030280373,0.0049184123,0.00015629324,0.00003615621,0.00006192961,0.00096644496,0.000012856853,0.003297998],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99965155,0.000083842744,0.000024028312,0.00008387466,0.00010604995,0.000050600862],"domain_scores_gemma":[0.9997764,0.000047856876,0.000058259953,0.00004615366,0.000026664957,0.00004456648],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024416624,0.00028307392,0.00029772473,0.0002988455,0.00014745777,0.0006429193,0.000119827004,0.00028993798,0.0025528935],"category_scores_gemma":[0.00036858313,0.00016762382,0.00028899248,0.00019434931,0.000240072,0.00022274551,0.00031673303,0.0003373382,0.0010426607],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034056,0.00004680255,0.001616833,0.00006978849,0.000026463624,0.00025410592,0.000050819828,0.000072779665,0.9892854,0.0007032076,0.00011698468,0.0074162898],"study_design_scores_gemma":[0.0001356331,0.0010097555,0.023708453,0.000052938245,0.00007282363,0.0039164554,0.00023559059,0.00096506975,0.9485484,0.001008924,0.0203349,0.000011140612],"about_ca_topic_score_codex":0.00021062003,"about_ca_topic_score_gemma":0.0002066324,"teacher_disagreement_score":0.0025528935,"about_ca_system_score_codex":0.00041840662,"about_ca_system_score_gemma":0.00040400808,"threshold_uncertainty_score":0.008540273},"labels":[],"label_agreement":null},{"id":"W2125153161","doi":"10.1128/jvi.06971-11","title":"Virus-Activated Interferon Regulatory Factor 7 Upregulates Expression of the Interferon-Regulated <i>BST2</i> Gene Independently of Interferon Signaling","year":2012,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Biology; Interferon; Interferon regulatory factors; IRF8; Gene; Virology; IRF1; Gene expression; Virus; Genetics; Transcription factor","score_opus":0.014934670763725557,"score_gpt":0.24104370319475102,"score_spread":0.22610903243102545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125153161","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941241,0.000863303,0.0019912915,0.0000928236,0.00005429922,0.000024567813,0.00038275318,0.00011646408,0.0023504447],"genre_scores_gemma":[0.9943212,0.0005387001,0.0016631334,0.000087851346,0.000025227891,0.00003105138,0.0007929838,0.000024988205,0.0025147686],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998578,0.000020013005,0.00000990062,0.000024694598,0.000038810656,0.000048680675],"domain_scores_gemma":[0.9999331,0.000015259106,0.00001566638,0.000007961581,0.000008344285,0.000019637862],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000076299984,0.00031361138,0.00018277901,0.0001775732,0.00009657618,0.00024546753,0.0000892686,0.00020838538,0.0013272782],"category_scores_gemma":[0.00007925367,0.00009065514,0.00032403864,0.00009309336,0.00016149606,0.00013378437,0.00012767418,0.0004579753,0.00037098696],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004174701,0.00001149762,0.00006733249,0.000011001888,0.0000012991294,0.000017686443,0.0000032146497,0.000015419022,0.99954116,0.00003146119,0.0000166624,0.00024159972],"study_design_scores_gemma":[0.000006747004,0.0001690173,0.002699,0.0000027911506,0.0000057518696,0.000078267854,0.000012664588,0.0004543353,0.9955071,0.000018633944,0.0010435655,0.0000021806147],"about_ca_topic_score_codex":0.0003850552,"about_ca_topic_score_gemma":0.00056706485,"teacher_disagreement_score":0.0013272782,"about_ca_system_score_codex":0.00027502386,"about_ca_system_score_gemma":0.00016446231,"threshold_uncertainty_score":0.0044401884},"labels":[],"label_agreement":null},{"id":"W2125178392","doi":"10.1016/j.exer.2003.12.012","title":"Chromatin immunoprecipitation assay on the rainbow trout opsin proximal promoters illustrates binding of NF-κB and c-jun to the SWS1 promoter in the retina☆","year":2004,"lang":"en","type":"article","venue":"Experimental Eye Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada; Alzheimer Society","keywords":"Chromatin immunoprecipitation; Rainbow trout; Immunoprecipitation; Opsin; Promoter; Chromatin; Retina; Cell biology; Binding site; Molecular biology; Chemistry; Biology; Fish <Actinopterygii>; Biochemistry; Gene; Rhodopsin; Fishery; Gene expression; Neuroscience; Retinal","score_opus":0.05469485683409429,"score_gpt":0.36821446045157286,"score_spread":0.31351960361747855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125178392","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96204466,0.0025401074,0.023372132,0.0006809142,0.00031959158,0.00009580819,0.0030242826,0.00040586988,0.0075167147],"genre_scores_gemma":[0.94262165,0.0017807126,0.020465607,0.00060243433,0.00009040256,0.00016766938,0.00909882,0.00014993279,0.025022598],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99961495,0.00003145841,0.000021071452,0.00011848889,0.000104751234,0.00010920405],"domain_scores_gemma":[0.9996131,0.0001531846,0.000051017312,0.000045027475,0.000051525538,0.00008626411],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032926255,0.0006601693,0.0003950231,0.0006788303,0.0006873761,0.00046458826,0.00041228472,0.0003230645,0.007339397],"category_scores_gemma":[0.00026960456,0.00040308517,0.0011214436,0.0005770634,0.000895384,0.00029138284,0.0004211092,0.0018322566,0.0015038183],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012695324,0.000029110492,0.0004676049,0.000041271105,0.000008499077,0.000030981366,0.000053917265,0.000021522761,0.99828243,0.00014594138,0.00008979422,0.0007019671],"study_design_scores_gemma":[0.000024026602,0.00024987874,0.034311928,0.000022487882,0.000040524075,0.00016920803,0.00017348255,0.0005302486,0.9607335,0.00017458992,0.0035557374,0.000014349129],"about_ca_topic_score_codex":0.008034286,"about_ca_topic_score_gemma":0.025132366,"teacher_disagreement_score":0.008034286,"about_ca_system_score_codex":0.000767511,"about_ca_system_score_gemma":0.0008948044,"threshold_uncertainty_score":0.024552703},"labels":[],"label_agreement":null},{"id":"W2126257962","doi":"10.1084/jem.2129insight4","title":"Inborn errors underlying herpes simplex encephalitis: From TLR3 to IRF3","year":2015,"lang":"en","type":"letter","venue":"The Journal of Experimental Medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children","funders":"National Institute of Allergy and Infectious Diseases; Agence Nationale de la Recherche","keywords":"Encephalitis; Herpes simplex virus; Virology; HSL and HSV; Medicine; Virus; Immunology","score_opus":0.08085624395602642,"score_gpt":0.3505287847152803,"score_spread":0.2696725407592539,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2126257962","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7997143,0.11866728,0.01180574,0.031089442,0.007848917,0.00018704,0.0009472903,0.0007360462,0.02900394],"genre_scores_gemma":[0.94044685,0.03458174,0.0029937972,0.0048629954,0.0017620139,0.00009249344,0.0005310013,0.00008158565,0.014647518],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99981815,0.000047754515,0.000018880495,0.00003635828,0.000027824828,0.000051117204],"domain_scores_gemma":[0.9998795,0.000017021817,0.000038016628,0.000021850527,0.0000125073675,0.000031054202],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039076476,0.00071974285,0.00040803998,0.00027976543,0.00035263874,0.00068227074,0.00037480704,0.0011037923,0.0060408274],"category_scores_gemma":[0.00032306206,0.0002363205,0.0005313197,0.00011198405,0.0007166752,0.00035957634,0.0005660227,0.0019356736,0.0010855626],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008987438,0.00075968966,0.018535815,0.0012295529,0.00038730886,0.027770432,0.00049156626,0.0004214077,0.7435208,0.013457721,0.022639485,0.16179882],"study_design_scores_gemma":[0.0015614918,0.005163162,0.1164275,0.0015660239,0.0014364821,0.1546918,0.0026235322,0.0034392697,0.34412575,0.023727546,0.34503612,0.00020122265],"about_ca_topic_score_codex":0.00025491844,"about_ca_topic_score_gemma":0.0002732419,"teacher_disagreement_score":0.0060408274,"about_ca_system_score_codex":0.00035615888,"about_ca_system_score_gemma":0.00035162628,"threshold_uncertainty_score":0.020208657},"labels":[],"label_agreement":null},{"id":"W2126548430","doi":"10.1074/jbc.m506812200","title":"Promoter Organization of the Interferon-A Genes Differentially Affects Virus-induced Expression and Responsiveness to TBK1 and IKK∈","year":2005,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Cancer Institute; Canadian Institutes of Health Research; Centre National de la Recherche Scientifique; Association pour la Recherche sur le Cancer","keywords":"TANK-binding kinase 1; Promoter; IκB kinase; IRF1; Transcription factor; Interferon regulatory factors; Biology; Interferon; Transcription (linguistics); Molecular biology; Response element; CREB; Gene; Kinase; Gene expression; Cell biology; Genetics; Protein kinase A; Cyclin-dependent kinase 2","score_opus":0.014225053761373802,"score_gpt":0.2420630517943341,"score_spread":0.2278379980329603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2126548430","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974082,0.00047315742,0.0015453926,0.000020683188,0.000017606539,0.00000918268,0.00011525863,0.000034728153,0.00037567585],"genre_scores_gemma":[0.9970266,0.00017047623,0.0015717631,0.000017214677,0.0000039590554,0.000020406746,0.0003839014,0.000025912927,0.00077978126],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99977154,0.000035389086,0.000021418762,0.000064492364,0.000042308482,0.000064869884],"domain_scores_gemma":[0.99980265,0.00003150119,0.00006279953,0.000025471156,0.000022518403,0.00005504546],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013406467,0.00022016908,0.00021520205,0.0001617565,0.0001208909,0.00024027903,0.00020114527,0.00017611647,0.00095855794],"category_scores_gemma":[0.00017754374,0.00019590918,0.00029997362,0.000072368675,0.0002405729,0.00012768623,0.00021739762,0.00048515998,0.00048175533],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008669218,0.000009607473,0.00019625569,0.000008846363,0.0000015214689,0.000011870436,0.0000079348665,0.000019326435,0.9993381,0.00003749247,0.000003939024,0.00027830823],"study_design_scores_gemma":[0.000017752229,0.00012666496,0.0072397534,0.000008934966,0.000013040083,0.0002159616,0.00003249813,0.00101624,0.9903799,0.000057912253,0.00088493346,0.0000065265835],"about_ca_topic_score_codex":0.0005663316,"about_ca_topic_score_gemma":0.00060093775,"teacher_disagreement_score":0.00095855794,"about_ca_system_score_codex":0.0003478719,"about_ca_system_score_gemma":0.0002917837,"threshold_uncertainty_score":0.00320673},"labels":[],"label_agreement":null},{"id":"W2130320029","doi":"10.1084/jem.20111680","title":"Evolutionary genetic dissection of human interferons","year":2011,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":171,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Centre National de la Recherche Scientifique; Fondation pour la Recherche Médicale; École Polytechnique Fédérale de Lausanne; Agence Nationale de la Recherche","keywords":"Biology; Population; Natural selection; Negative selection; Innate immune system; Genetics; Immune system; Immunity; Immunology; Gene","score_opus":0.036463898426639586,"score_gpt":0.29665555464149507,"score_spread":0.26019165621485546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130320029","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9872318,0.0014347774,0.0064449487,0.00025376424,0.000022097927,0.000027475966,0.00019824869,0.000021061851,0.0043657953],"genre_scores_gemma":[0.9896885,0.0019150091,0.0066263047,0.00022865427,0.00003356277,0.000022610278,0.00036065627,0.000018801118,0.0011058537],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976367,0.000086953616,0.000017994822,0.000056082932,0.000041856456,0.000033424894],"domain_scores_gemma":[0.99986744,0.00005011516,0.00003378888,0.000015222348,0.00001872563,0.000014761437],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054760714,0.00022176014,0.00016853798,0.0005279341,0.0002400251,0.00025698243,0.00016910798,0.00031596422,0.0006479059],"category_scores_gemma":[0.00042498528,0.00012673668,0.0002326613,0.00037469863,0.00027689716,0.00017542497,0.0003303511,0.00045738762,0.00011555888],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00092442083,0.000120322555,0.04397157,0.00016304373,0.00016459949,0.0011911739,0.00040938426,0.0029774182,0.86747783,0.010069134,0.00028541888,0.0722456],"study_design_scores_gemma":[0.00023171434,0.0013521335,0.663831,0.00029857736,0.00059647654,0.012013101,0.0009723363,0.021488808,0.21244194,0.015097606,0.07153996,0.00013633557],"about_ca_topic_score_codex":0.0008606288,"about_ca_topic_score_gemma":0.0011798284,"teacher_disagreement_score":0.0008606288,"about_ca_system_score_codex":0.00041247558,"about_ca_system_score_gemma":0.0002792056,"threshold_uncertainty_score":0.0029927492},"labels":[],"label_agreement":null},{"id":"W2131617804","doi":"10.1038/ni.1932","title":"IFI16 is an innate immune sensor for intracellular DNA","year":2010,"lang":"en","type":"article","venue":"Nature Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1632,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"NHLBI Division of Intramural Research; National Heart, Lung, and Blood Institute; National Institute of Allergy and Infectious Diseases; Medical Research Council; Sundhed og Sygdom, Det Frie Forskningsråd; University of Toronto; Trinity College Dublin; National Institutes of Health; H. Lundbeck A/S; Division of Intramural Research, National Institute of Allergy and Infectious Diseases; Lundbeckfonden; Science Foundation Ireland; York University; University of Miami","keywords":"IRF3; AIM2; Innate immune system; Biology; DNA; Interferon; Stimulator of interferon genes; Cell biology; Pattern recognition receptor; TLR2; DNA virus; Interferon regulatory factors; Intracellular; Mediator; Transcription (linguistics); Gene; Genetics; Receptor; Genome","score_opus":0.006877522458070944,"score_gpt":0.25599698050211833,"score_spread":0.2491194580440474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131617804","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8929556,0.033323154,0.0437434,0.0036183863,0.001542181,0.00016918946,0.0008957022,0.0009829412,0.02276936],"genre_scores_gemma":[0.9458219,0.0067237527,0.02008392,0.000885681,0.00020569099,0.00007817095,0.0012824578,0.00007181433,0.024846612],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998246,0.000019523119,0.000013314284,0.000042528252,0.00006850041,0.00003153952],"domain_scores_gemma":[0.99987745,0.000015327576,0.000027559054,0.000016355643,0.000029710503,0.00003359271],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023650804,0.00053932925,0.0002981889,0.00027815954,0.0002968566,0.00045915792,0.00023894417,0.0006807633,0.0024915386],"category_scores_gemma":[0.0002315166,0.00016213267,0.00034564364,0.00016743563,0.00028633274,0.0005288404,0.0004670219,0.0009069817,0.0012694679],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012751909,0.000014013149,0.0004491447,0.00005894548,0.0000062759195,0.00009585624,0.000021015412,0.00003839425,0.9909203,0.00039551183,0.00045469918,0.0074183764],"study_design_scores_gemma":[0.000021525737,0.00020721908,0.0041355654,0.000015362872,0.000009053608,0.0014541213,0.00004469327,0.0006797641,0.95947224,0.00065963203,0.03328829,0.000012582151],"about_ca_topic_score_codex":0.00013828771,"about_ca_topic_score_gemma":0.00014087328,"teacher_disagreement_score":0.0024915386,"about_ca_system_score_codex":0.00039489716,"about_ca_system_score_gemma":0.00017189166,"threshold_uncertainty_score":0.008334994},"labels":[],"label_agreement":null},{"id":"W2134121255","doi":"10.1100/tsw.2010.132","title":"In Search of a Function for BCLAF1","year":2010,"lang":"en","type":"review","venue":"The Scientific World JOURNAL","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Lung Association","keywords":"Repressor; Transcription (linguistics); Lytic cycle; Transcription factor; Biology; Transcriptional regulation; Function (biology); Genetics; Gene; Virus","score_opus":0.05603090247290622,"score_gpt":0.34648382738706046,"score_spread":0.29045292491415425,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134121255","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010004633,0.9904428,0.0014703474,0.0013725706,0.0009315094,0.000012835793,0.00003641943,0.00003772581,0.004695241],"genre_scores_gemma":[0.009954452,0.97751725,0.0019148029,0.0014703994,0.0008674419,0.00003019601,0.00013870942,0.0000072987714,0.008099543],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998863,0.000015942964,0.000011879824,0.0000379616,0.00003404674,0.000013771431],"domain_scores_gemma":[0.9998336,0.000051829036,0.000027792266,0.000008681265,0.000050044306,0.000027993152],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040387057,0.00066986325,0.00083724514,0.0009637622,0.00032941136,0.0008131469,0.0009235558,0.0012371052,0.0029522437],"category_scores_gemma":[0.00033747102,0.00015939753,0.00022214824,0.0008117564,0.0006178301,0.0013970721,0.0005055305,0.0022795778,0.0041665942],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022306533,0.00007735171,0.0005540367,0.007585928,0.000062580955,0.00089829863,0.00013640588,0.00028751488,0.03496754,0.027823165,0.026691522,0.9006925],"study_design_scores_gemma":[0.000019187624,0.00008164331,0.0004702251,0.0004950437,0.000029483057,0.0024623084,0.000051505343,0.000074559524,0.007627301,0.0026457657,0.98603106,0.000012013448],"about_ca_topic_score_codex":0.00043428884,"about_ca_topic_score_gemma":0.00049267965,"teacher_disagreement_score":0.0029522437,"about_ca_system_score_codex":0.00094007916,"about_ca_system_score_gemma":0.0006249907,"threshold_uncertainty_score":0.009876251},"labels":[],"label_agreement":null},{"id":"W2138282259","doi":"10.1016/s1474-4422(13)70258-8","title":"Assessment of interferon-related biomarkers in Aicardi-Goutières syndrome associated with mutations in TREX1, RNASEH2A, RNASEH2B, RNASEH2C, SAMHD1, and ADAR: a case-control study","year":2013,"lang":"en","type":"article","venue":"The Lancet Neurology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":438,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Children's Hospital","funders":"National Center for Research Resources","keywords":"ADAR; SAMHD1; Interferon; Genetics; Virology; Biology; Medicine; Polymerase chain reaction; Gene; RNA; Reverse transcriptase","score_opus":0.012359994245116693,"score_gpt":0.2552329367692237,"score_spread":0.24287294252410702,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138282259","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99937856,0.00022428189,0.00013517386,0.000016132362,0.0000046859823,0.000013832432,0.000045340483,0.0000038380003,0.0001782827],"genre_scores_gemma":[0.99960655,0.00008581005,0.00013475312,0.000020352925,0.000011914869,0.000008899755,0.000051027735,0.000002340603,0.000078417965],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991155,0.00023595251,0.00012513167,0.00028689372,0.00014318261,0.00009325977],"domain_scores_gemma":[0.9985684,0.0006012416,0.00037279926,0.000121746314,0.00014473405,0.00019095931],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009907368,0.0012058056,0.00094933924,0.002000578,0.0010494926,0.0008440928,0.0007043956,0.0016377143,0.0015749196],"category_scores_gemma":[0.0028159223,0.00071301963,0.00077423954,0.00096850685,0.0010435063,0.00057650043,0.00045077104,0.00067511987,0.00019337794],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017692741,0.00043649858,0.9678187,0.00005311468,0.00031913942,0.01877812,0.00064707425,0.00013295731,0.0064785006,0.00014330244,0.00014081111,0.0032826043],"study_design_scores_gemma":[0.00022604123,0.0010998215,0.95490897,0.000033275774,0.00036892353,0.040433165,0.00046805953,0.0009945477,0.000935763,0.00016178799,0.00033177336,0.000037757127],"about_ca_topic_score_codex":0.0027365491,"about_ca_topic_score_gemma":0.0016983738,"teacher_disagreement_score":0.0027365491,"about_ca_system_score_codex":0.0005974003,"about_ca_system_score_gemma":0.00028796136,"threshold_uncertainty_score":0.005441308},"labels":[],"label_agreement":null},{"id":"W2138401012","doi":"10.1186/1743-422x-3-66","title":"Hepatitis C virus NS2 and NS3/4A proteins are potent inhibitors of host cell cytokine/chemokine gene expression.","year":2006,"lang":"en","type":"article","venue":"Virology Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Medical Research Council; Academy of Finland; European Commission","keywords":"Biology; NS3; Proteases; NS2-3 protease; Gene expression; Molecular biology; Virology; Hepatitis C virus; Virus; Gene; Biochemistry","score_opus":0.004932649920208157,"score_gpt":0.19303909029295555,"score_spread":0.18810644037274737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138401012","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9577399,0.02874256,0.007025378,0.00016472396,0.00012110926,0.00013272562,0.00079864106,0.00016387674,0.005111012],"genre_scores_gemma":[0.9823517,0.005491853,0.0056862743,0.000100888356,0.000051431274,0.00013654477,0.001361806,0.00003282589,0.0047866567],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997664,0.000054078635,0.000017764884,0.000028494911,0.00008141355,0.00005186887],"domain_scores_gemma":[0.9998541,0.0000335432,0.000047891233,0.000014116985,0.000023255536,0.000027065851],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027096,0.0005454443,0.00024581412,0.0001986227,0.00015804301,0.00023777533,0.00012682662,0.00020627768,0.0019857357],"category_scores_gemma":[0.00013586263,0.00010161869,0.0003369674,0.00013214162,0.00020703864,0.0001390232,0.00015201955,0.0003010044,0.00060881645],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001186508,0.000033380325,0.00027183018,0.00007645629,0.000010965627,0.000022756698,0.0000039400766,0.00006628064,0.9966544,0.000076341974,0.00006569577,0.0025992934],"study_design_scores_gemma":[0.000017880042,0.000544303,0.0030105328,0.000007862557,0.00001815517,0.0002714435,0.00000669386,0.00035496417,0.99006116,0.00003286332,0.0056705996,0.0000036727981],"about_ca_topic_score_codex":0.00030309273,"about_ca_topic_score_gemma":0.00067168166,"teacher_disagreement_score":0.0019857357,"about_ca_system_score_codex":0.00030490095,"about_ca_system_score_gemma":0.00023663008,"threshold_uncertainty_score":0.0066429377},"labels":[],"label_agreement":null},{"id":"W2138822980","doi":"10.1186/s13041-014-0090-x","title":"Nlrx1 regulates neuronal cell death","year":2014,"lang":"en","type":"article","venue":"Molecular Brain","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital; Université de Sherbrooke","funders":"Université de Sherbrooke","keywords":"Psychopharmacology; Neuroscience; Programmed cell death; Psychology; Biology; Apoptosis; Psychiatry; Genetics","score_opus":0.005425214948318454,"score_gpt":0.21057339688100232,"score_spread":0.20514818193268386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138822980","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97696143,0.013580791,0.004193793,0.0007058918,0.00008632957,0.000030759747,0.00038232,0.00014068242,0.0039180364],"genre_scores_gemma":[0.9889987,0.0048284936,0.0016770546,0.00010469413,0.00003112562,0.000030564788,0.00046079434,0.000018538409,0.0038500277],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998827,0.000020879195,0.000012625645,0.000028959044,0.000026708896,0.00002807294],"domain_scores_gemma":[0.9998915,0.000013828396,0.000041476113,0.000009087021,0.000022727552,0.000021275277],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014545216,0.0002714767,0.00020590196,0.00016281837,0.00024105115,0.00037776702,0.00021797734,0.00028994045,0.0015706477],"category_scores_gemma":[0.00010839941,0.00006547419,0.00020026784,0.000112008405,0.00028086308,0.00032652915,0.0002227313,0.0004494129,0.00069449906],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033550014,0.00003946767,0.0008499551,0.00015547218,0.000011237798,0.00024682638,0.000053029842,0.00019227515,0.99359035,0.00062488805,0.00030959406,0.003591373],"study_design_scores_gemma":[0.0000647704,0.00033941114,0.017805906,0.00005881764,0.00004662395,0.0013260368,0.00023777067,0.0018713834,0.96769744,0.0011178654,0.009422475,0.000011628518],"about_ca_topic_score_codex":0.00016586315,"about_ca_topic_score_gemma":0.00018784686,"teacher_disagreement_score":0.0015706477,"about_ca_system_score_codex":0.00046410284,"about_ca_system_score_gemma":0.00016009623,"threshold_uncertainty_score":0.0052543283},"labels":[],"label_agreement":null},{"id":"W2139241299","doi":"10.4049/jimmunol.1300344","title":"Synergistic Expression of the CXCL10 Gene in Response to IL-1β and IFN-γ Involves NF-κB, Phosphorylation of STAT1 at Tyr701, and Acetylation of Histones H3 and H4","year":2013,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"STAT1; CXCL10; Phosphorylation; Molecular biology; Gene expression; Biology; Regulation of gene expression; Gene; Cell biology; Chemistry; Chemokine; Biochemistry; Immune system; Immunology","score_opus":0.008431272741975256,"score_gpt":0.22124839381920156,"score_spread":0.2128171210772263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2139241299","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99223596,0.0011286746,0.004623401,0.00011041735,0.000053865337,0.000046276513,0.0006696841,0.00006750874,0.0010641883],"genre_scores_gemma":[0.9907425,0.00096797454,0.004760625,0.0000668197,0.000016492635,0.00008256705,0.0008863227,0.000020591646,0.0024560157],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99977964,0.000027212807,0.000021930344,0.000051326697,0.00006172046,0.000058165984],"domain_scores_gemma":[0.9998816,0.000018060218,0.00003939545,0.000014246712,0.0000104059245,0.00003618327],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018904333,0.0006200676,0.00032500486,0.0002531064,0.00011094859,0.00026083074,0.00011909885,0.00018634992,0.001558567],"category_scores_gemma":[0.000056281275,0.00018689639,0.00048182494,0.00015322687,0.0002986003,0.0001716663,0.00020017277,0.0007268891,0.00032592053],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008125567,0.000021347823,0.00021527581,0.000032402535,0.0000032957416,0.00001878877,0.000009123383,0.000037739606,0.9990237,0.000037343987,0.000011507306,0.0005082424],"study_design_scores_gemma":[0.000017158533,0.00037393108,0.004800478,0.0000075107487,0.000015811298,0.00023416452,0.000032124757,0.0004960476,0.9926353,0.000036282618,0.0013467534,0.0000044074027],"about_ca_topic_score_codex":0.00027588394,"about_ca_topic_score_gemma":0.000645852,"teacher_disagreement_score":0.001558567,"about_ca_system_score_codex":0.00031312348,"about_ca_system_score_gemma":0.00030622818,"threshold_uncertainty_score":0.0052139163},"labels":[],"label_agreement":null},{"id":"W2140054283","doi":"10.1073/pnas.1107032108","title":"Structural basis for the sequence-specific recognition of human ISG15 by the NS1 protein of influenza B virus","year":2011,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Institutes of Health; Howard Hughes Medical Institute","keywords":"ISG15; Linker; Chemistry; Interferon-stimulated gene; Binding site; Binding domain; Peptide sequence; Biology; Ubiquitin; Biochemistry; Gene; Receptor","score_opus":0.1592025313672796,"score_gpt":0.33151438896658947,"score_spread":0.17231185759930986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140054283","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99238366,0.0010390091,0.0033946894,0.00014579263,0.00003922107,0.00004777578,0.00016869005,0.00007999656,0.0027011898],"genre_scores_gemma":[0.9966539,0.00022405855,0.0019335438,0.00011604189,0.0000101527585,0.000015887637,0.00044539542,0.000011074024,0.0005899965],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999343,0.000010533339,0.000006044959,0.000015210829,0.000021418513,0.00001241892],"domain_scores_gemma":[0.999918,0.0000093127455,0.00002549412,0.000007955789,0.0000102922095,0.000028942397],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006925425,0.00030101242,0.00032882337,0.00013388493,0.0003270622,0.00023383019,0.0003709861,0.00042477448,0.0012947157],"category_scores_gemma":[0.00015884601,0.0001690527,0.0003410649,0.00012361692,0.00025413436,0.00017081804,0.00024981206,0.00037798117,0.0005822828],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003558539,0.00010663783,0.002377199,0.00010106275,0.00002789904,0.00068691775,0.00007637374,0.0026639977,0.98863834,0.0027177234,0.0002433494,0.002004779],"study_design_scores_gemma":[0.00043961866,0.0013165136,0.091758214,0.000116603216,0.0001401914,0.0038821953,0.0003271151,0.08116098,0.80048805,0.005758058,0.0145302415,0.00008224687],"about_ca_topic_score_codex":0.0017147927,"about_ca_topic_score_gemma":0.0013466816,"teacher_disagreement_score":0.0017147927,"about_ca_system_score_codex":0.0005937707,"about_ca_system_score_gemma":0.00042667432,"threshold_uncertainty_score":0.004331231},"labels":[],"label_agreement":null},{"id":"W2140550112","doi":"10.1136/bmjopen-2012-001410","title":"TRIM59, a novel multiple cancer biomarker for immunohistochemical detection of tumorigenesis","year":2012,"lang":"en","type":"article","venue":"BMJ Open","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Toronto; Lawson Health Research Institute; Sunnybrook Health Science Centre; Western University","funders":"National Cancer Institute","keywords":"Medicine; Rheumatism; Rheumatoid arthritis; Rheumatology; Internal medicine; Receiver operating characteristic; Kappa; Cart; Biomarker; Cancer; Oncology; Nuclear medicine","score_opus":0.10760355101731886,"score_gpt":0.4053908593616098,"score_spread":0.2977873083442909,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140550112","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9561547,0.0069607114,0.032444235,0.00025397033,0.00009058345,0.00026974888,0.00093676837,0.00035365272,0.0025355467],"genre_scores_gemma":[0.9617603,0.0017650271,0.030955246,0.00024932125,0.00005335438,0.00028942243,0.0013958958,0.000027709839,0.0035038309],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996488,0.00006237126,0.000022532273,0.00011329772,0.000095303476,0.00005761961],"domain_scores_gemma":[0.9997782,0.000031666263,0.00007319884,0.000026447053,0.000045050932,0.00004548597],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047351862,0.00035413442,0.00038797403,0.000803526,0.00025429286,0.0004724748,0.00038117016,0.0007890062,0.002141113],"category_scores_gemma":[0.00035589113,0.0001942602,0.00035865747,0.0003141102,0.00028089815,0.00030514057,0.0003448616,0.0004980547,0.0007386671],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014097623,0.00003141546,0.0031811763,0.00009118252,0.000013954173,0.00008426517,0.000012218098,0.00008013669,0.9909956,0.00008770376,0.00012120133,0.005160258],"study_design_scores_gemma":[0.000044514283,0.0011692734,0.04865918,0.00003480059,0.00011669223,0.0037758471,0.0000693665,0.0038813888,0.9346275,0.00014760652,0.0074534393,0.00002040389],"about_ca_topic_score_codex":0.0003075404,"about_ca_topic_score_gemma":0.0005974367,"teacher_disagreement_score":0.002141113,"about_ca_system_score_codex":0.00041837094,"about_ca_system_score_gemma":0.00021719997,"threshold_uncertainty_score":0.00716275},"labels":[],"label_agreement":null},{"id":"W2140700343","doi":"10.1073/pnas.0611551104","title":"Negative regulation of the RIG-I signaling by the ubiquitin ligase RNF125","year":2007,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":470,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Ministry of Health, Labour and Welfare; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Ubiquitin ligase; Ubiquitin; RIG-I; Cell biology; Biology; Ubiquitin-conjugating enzyme; MDA5; Cytokine; Signal transduction; Gene; RNA; Biochemistry; Genetics; RNA interference","score_opus":0.0262938210452021,"score_gpt":0.29314678125117516,"score_spread":0.26685296020597304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140700343","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9840261,0.0032582174,0.006001429,0.00022318575,0.00007799474,0.000024765399,0.00014206574,0.000136681,0.0061095827],"genre_scores_gemma":[0.9969291,0.00033864757,0.0011868667,0.00004365956,0.000007115152,0.0000068082195,0.00007921301,0.000008479012,0.0014001376],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997212,0.00005332649,0.000018246252,0.000049692288,0.00009483501,0.000062647516],"domain_scores_gemma":[0.9998747,0.000020992435,0.00004091886,0.000021350732,0.000017725042,0.000024335468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002208246,0.00044864797,0.00021950483,0.0002223979,0.00013557545,0.0004160695,0.00026745093,0.00027710845,0.0007335921],"category_scores_gemma":[0.00024147028,0.00010658415,0.0002587388,0.000060304097,0.00034887972,0.00024009995,0.00028308443,0.00036640227,0.0003545129],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007562726,0.000009442752,0.00026759008,0.000018042609,0.0000033997085,0.00007953321,0.000007427445,0.00006041722,0.9968929,0.000497895,0.00007064741,0.0020169914],"study_design_scores_gemma":[0.00001223556,0.00007745837,0.003212275,0.0000068439313,0.000008574697,0.00031861584,0.000016789274,0.0017737516,0.9927355,0.000183478,0.0016485957,0.0000060035172],"about_ca_topic_score_codex":0.0004011979,"about_ca_topic_score_gemma":0.00048018852,"teacher_disagreement_score":0.0007335921,"about_ca_system_score_codex":0.00055263116,"about_ca_system_score_gemma":0.00017895937,"threshold_uncertainty_score":0.0040096045},"labels":[],"label_agreement":null},{"id":"W2141727194","doi":"10.1016/j.immuni.2015.10.005","title":"Ubiquitin Ligase TRIM62 Regulates CARD9-Mediated Anti-fungal Immunity and Intestinal Inflammation","year":2015,"lang":"en","type":"article","venue":"Immunity","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":135,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Heart Institute","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; National Institutes of Health; Leona M. and Harry B. Helmsley Charitable Trust","keywords":"Ubiquitin ligase; Biology; Ubiquitin; Inflammation; Immunity; Immunology; DNA ligase; Cell biology; Immune system; Genetics; Enzyme; Biochemistry; Gene","score_opus":0.024662518396716016,"score_gpt":0.2574829849314019,"score_spread":0.2328204665346859,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141727194","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.978672,0.010073607,0.0036377278,0.00059373234,0.00020087861,0.000030607476,0.00063484465,0.00019740475,0.005959132],"genre_scores_gemma":[0.99368227,0.0010359955,0.0010734869,0.00010857363,0.000028071318,0.0000137183115,0.00033884752,0.000020117264,0.0036989178],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996203,0.000056760236,0.000032136246,0.00008021028,0.000069231755,0.00014128153],"domain_scores_gemma":[0.9998098,0.0000100125,0.00006060336,0.000022099302,0.000032403765,0.00006516316],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002836415,0.00027256488,0.00039079494,0.0003720786,0.00039667482,0.00081251253,0.00029664155,0.0005339126,0.0028216064],"category_scores_gemma":[0.00023471517,0.00020981947,0.0003540669,0.00018102844,0.0003973123,0.0005497353,0.0006338363,0.00082266226,0.0009755591],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020929952,0.00009707121,0.0051732026,0.0001702857,0.000041335996,0.0003863392,0.00007719488,0.00020946158,0.97562283,0.0014436649,0.0009962341,0.013689464],"study_design_scores_gemma":[0.00018305761,0.00059941993,0.15319113,0.0000946236,0.00012889014,0.001469222,0.0007965155,0.0061306716,0.8208649,0.0020423296,0.014458592,0.000040643194],"about_ca_topic_score_codex":0.00035066184,"about_ca_topic_score_gemma":0.0007449303,"teacher_disagreement_score":0.0028216064,"about_ca_system_score_codex":0.0005234505,"about_ca_system_score_gemma":0.00024490882,"threshold_uncertainty_score":0.00943917},"labels":[],"label_agreement":null},{"id":"W2142368962","doi":"10.4049/jimmunol.177.8.5059","title":"Involvement of the IκB Kinase (IKK)-Related Kinases Tank-Binding Kinase 1/IKKi and Cullin-Based Ubiquitin Ligases in IFN Regulatory Factor-3 Degradation","year":2006,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; McGill University; Institute for Research in Immunology and Cancer; Université de Montréal","funders":"","keywords":"Biology; Cullin; Neddylation; Transcription factor; Kinase; Ubiquitin; Cell biology; Innate immune system; TANK-binding kinase 1; NEDD8; Phosphorylation; Sendai virus; Ubiquitin ligase; IRF1; Virus; MAP kinase kinase kinase; Virology; Protein kinase A; Immune system; Immunology; Gene; Genetics","score_opus":0.011846772002761526,"score_gpt":0.2250913872001541,"score_spread":0.21324461519739257,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142368962","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99323,0.004483135,0.0014110821,0.00007357927,0.000015729813,0.000008850307,0.00022689834,0.000022924838,0.0005278272],"genre_scores_gemma":[0.99747,0.0008438547,0.00073348655,0.000024327768,0.0000037935997,0.00000941396,0.0001790557,0.0000040437535,0.0007321066],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998622,0.000016602675,0.000020303918,0.00003101241,0.0000314398,0.00003847895],"domain_scores_gemma":[0.99987733,0.000012671065,0.000050130708,0.000016319835,0.000014179772,0.000029332905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027172707,0.00029545583,0.00022461351,0.00018152746,0.00019820896,0.00040184346,0.00017219597,0.0003448688,0.0006165962],"category_scores_gemma":[0.000159467,0.000112910486,0.0004622549,0.00009269183,0.0002055969,0.0003229158,0.00019085211,0.00030552482,0.00022536324],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030335598,0.000024476352,0.0014880017,0.000070920985,0.000012560032,0.00016256238,0.000018983577,0.00012914016,0.9958568,0.00019395645,0.000027011585,0.0017122002],"study_design_scores_gemma":[0.000016805854,0.00011333469,0.023490623,0.00000900952,0.000024071553,0.0007416148,0.000044596636,0.0012718535,0.9727955,0.00016597686,0.001316696,0.000009898758],"about_ca_topic_score_codex":0.0004182485,"about_ca_topic_score_gemma":0.00036343656,"teacher_disagreement_score":0.0006165962,"about_ca_system_score_codex":0.00045312996,"about_ca_system_score_gemma":0.00023553745,"threshold_uncertainty_score":0.003287673},"labels":[],"label_agreement":null},{"id":"W2142516917","doi":"10.1002/ajmg.a.31081","title":"Spondyloenchondrodysplasia with spasticity, cerebral calcifications, and immune dysregulation: Clinical and radiographic delineation of a pleiotropic disorder","year":2006,"lang":"en","type":"article","venue":"American Journal of Medical Genetics Part A","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Spasticity; Medicine; Immune dysregulation; Disease; Immunodeficiency; Immune system; Pathology; Immunology; Physical medicine and rehabilitation","score_opus":0.007778585912652282,"score_gpt":0.2666984177114982,"score_spread":0.2589198317988459,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142516917","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99610066,0.0012572361,0.0006661084,0.00008444045,0.0000053585823,0.0000241967,0.00009342713,0.000028013123,0.0017405261],"genre_scores_gemma":[0.9975903,0.0007309667,0.0011896649,0.00005760964,0.000021424234,0.000014340623,0.00009076303,0.0000048632496,0.00030003276],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.9997718,0.000032687327,0.000039994462,0.000058282356,0.00005521268,0.000042017415],"domain_scores_gemma":[0.9995716,0.0001224565,0.00013280085,0.000028375907,0.00004204652,0.000102684564],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033941987,0.000869102,0.000588781,0.0016562397,0.00053756067,0.00026267197,0.00032148435,0.0004897831,0.0013819042],"category_scores_gemma":[0.0010547006,0.0003483219,0.00024008667,0.00071270444,0.001181945,0.000406262,0.0007490234,0.00041278396,0.00018403042],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040831338,0.0001270515,0.6006185,0.0002464124,0.00006458411,0.28915456,0.0016977595,0.00034227245,0.0794549,0.00085791876,0.00040736143,0.026620356],"study_design_scores_gemma":[0.00001989873,0.0002709087,0.44831413,0.000040849292,0.00004575418,0.5471226,0.000310135,0.00027130792,0.0024457865,0.00025766678,0.0008841047,0.000016862066],"about_ca_topic_score_codex":0.0018491459,"about_ca_topic_score_gemma":0.00224772,"teacher_disagreement_score":0.0018491459,"about_ca_system_score_codex":0.0002263711,"about_ca_system_score_gemma":0.00046278417,"threshold_uncertainty_score":0.0046229362},"labels":[],"label_agreement":null},{"id":"W2142586356","doi":"10.1128/jvi.00223-14","title":"The Amphibian (Xenopus laevis) Type I Interferon Response to Frog Virus 3: New Insight into Ranavirus Pathogenicity","year":2014,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":90,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Life Sciences Research Foundation; Howard Hughes Medical Institute; National Institutes of Health; National Science Foundation","keywords":"Ranavirus; Biology; Tadpole (physics); Amphibian; Iridovirus; Xenopus; Interferon; Virology; Virus; African clawed frog; Viral replication; Microbiology; Gene; Ecology; Genetics","score_opus":0.01185724615937701,"score_gpt":0.26227050135181257,"score_spread":0.25041325519243557,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142586356","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9655529,0.021375049,0.009129625,0.00035532695,0.000043324417,0.000030578853,0.0003565413,0.00009265355,0.0030639675],"genre_scores_gemma":[0.9788775,0.011389888,0.0066705076,0.00016966391,0.00008081281,0.000029884719,0.0006175162,0.000011021983,0.0021531153],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99996114,0.000008207772,0.0000031008628,0.00000996155,0.0000062133618,0.000011413102],"domain_scores_gemma":[0.99994636,0.000008867911,0.00002130365,0.0000038216103,0.000008085536,0.00001151844],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001740383,0.0002764635,0.00013198558,0.00017724468,0.00009430727,0.00023383085,0.00015587991,0.00026556657,0.0008951102],"category_scores_gemma":[0.00004645105,0.00007336935,0.000202573,0.00007128701,0.00023871713,0.00030476143,0.00014148203,0.0003793988,0.00028759288],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013353121,0.000019056642,0.0015176396,0.000109340304,0.000006008763,0.00010202519,0.000032163865,0.00010077187,0.9934116,0.00022554322,0.00003609517,0.0043060523],"study_design_scores_gemma":[0.00004461948,0.0025589517,0.13923544,0.00017244597,0.00011111895,0.0045627733,0.00047828807,0.0037733936,0.82226205,0.001267275,0.025500767,0.00003288177],"about_ca_topic_score_codex":0.0001545619,"about_ca_topic_score_gemma":0.00021919675,"teacher_disagreement_score":0.0008951102,"about_ca_system_score_codex":0.00017350393,"about_ca_system_score_gemma":0.00009319924,"threshold_uncertainty_score":0.0029944777},"labels":[],"label_agreement":null},{"id":"W2144259303","doi":"10.1056/nejme1407246","title":"STING-Associated Vasculopathy with Onset in Infancy — A New Interferonopathy","year":2014,"lang":"en","type":"letter","venue":"New England Journal of Medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children","funders":"","keywords":"Stimulator of interferon genes; Endoplasmic reticulum; Biology; Context (archaeology); Receptor; Sting; Interferon type I; Germline; Interferon; Transmembrane protein; Gene; Haematopoiesis; Transfection; Pattern recognition receptor; Cell biology; Innate immune system; Immunology; Genetics","score_opus":0.014662278961140732,"score_gpt":0.24299680415185332,"score_spread":0.2283345251907126,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2144259303","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.76353973,0.046147972,0.011494708,0.1101076,0.009807952,0.00038316037,0.00040699804,0.0008427495,0.057269108],"genre_scores_gemma":[0.9415965,0.012436661,0.0034901772,0.020740181,0.015166445,0.00012073398,0.00009706893,0.00006437015,0.00628786],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9993319,0.00014136192,0.00006648381,0.00015222997,0.00013328699,0.0001746884],"domain_scores_gemma":[0.99886274,0.0005957963,0.00019727973,0.00008057945,0.00008198307,0.0001815969],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00075539586,0.0016868808,0.001257295,0.0011774718,0.00097432686,0.00090901565,0.0009116946,0.007426425,0.00123912],"category_scores_gemma":[0.0032983236,0.00060501404,0.0007185127,0.0006845718,0.0013268712,0.0013873455,0.00064633606,0.003272393,0.00038707166],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056867084,0.00003667377,0.0036292167,0.00007527388,0.000014409535,0.9869602,0.00013452297,0.00007671622,0.001507681,0.0012595644,0.002474682,0.0037742383],"study_design_scores_gemma":[0.00005419631,0.00012727604,0.007062818,0.000108282016,0.000035782447,0.9841785,0.00010307767,0.0006865821,0.0005209084,0.0012522809,0.0058515305,0.000018763354],"about_ca_topic_score_codex":0.00082903844,"about_ca_topic_score_gemma":0.0015336695,"teacher_disagreement_score":0.007426425,"about_ca_system_score_codex":0.0013008807,"about_ca_system_score_gemma":0.00049698696,"threshold_uncertainty_score":0.009438634},"labels":[],"label_agreement":null},{"id":"W2146014278","doi":"10.1016/j.cjca.2012.07.473","title":"518 Matrixmetalloproteinase-12 Regulates the Antiviral Immune Response During Viral Myocarditis Through Genetic Regulation and Interferon Degradation: Offering a Novel Antiviral Therapeutic Strategy","year":2012,"lang":"en","type":"article","venue":"Canadian Journal of Cardiology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Alberta Hospital Edmonton","funders":"","keywords":"Immune system; Innate immune system; Interferon; Biology; Immunology; Coxsackievirus; Medicine; Virology; Virus; Enterovirus","score_opus":0.018149427013985205,"score_gpt":0.23006441169688907,"score_spread":0.21191498468290387,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146014278","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9635869,0.01720061,0.009667417,0.0024211276,0.0004989596,0.00007760172,0.0001841318,0.00015801034,0.006205237],"genre_scores_gemma":[0.9920918,0.00240587,0.0018543578,0.0001780101,0.000090343536,0.000024336005,0.00008241452,0.000012471719,0.00326052],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999223,0.000012049606,0.0000043018727,0.000011517525,0.000016121541,0.000033740755],"domain_scores_gemma":[0.99996185,0.000003992369,0.000011264374,0.000004086753,0.000006636739,0.000012228947],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018539732,0.00022823058,0.00019882279,0.00012539765,0.00021178658,0.00033352926,0.00017882716,0.00029115708,0.001122608],"category_scores_gemma":[0.00009624171,0.00008986279,0.00014703571,0.00006357618,0.00034253142,0.00019732326,0.00018291587,0.0006074512,0.00023215896],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007115896,0.000060996277,0.0007671101,0.00004705617,0.000007484094,0.00019994476,0.00002430405,0.00008714055,0.986743,0.0010774136,0.00043344614,0.009840505],"study_design_scores_gemma":[0.00028499874,0.001713057,0.027236028,0.00004114066,0.00009348016,0.0017258121,0.0002117741,0.0033192916,0.9423231,0.0017923916,0.021230964,0.000027970405],"about_ca_topic_score_codex":0.00042868467,"about_ca_topic_score_gemma":0.0011765907,"teacher_disagreement_score":0.001122608,"about_ca_system_score_codex":0.00036228017,"about_ca_system_score_gemma":0.00023889015,"threshold_uncertainty_score":0.0037554502},"labels":[],"label_agreement":null},{"id":"W2146230109","doi":"10.1038/ng1842","title":"Mutations in genes encoding ribonuclease H2 subunits cause Aicardi-Goutières syndrome and mimic congenital viral brain infection","year":2006,"lang":"en","type":"article","venue":"Nature Genetics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":673,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Biology; Ribonuclease; Gene; Genetics; Mutation; Immune system; Virology; RNA","score_opus":0.0071154285877817365,"score_gpt":0.24377100013137418,"score_spread":0.23665557154359243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146230109","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967325,0.00030445284,0.0008731226,0.00015759251,0.000052876916,0.000022221531,0.00014136973,0.00009669897,0.0016192879],"genre_scores_gemma":[0.99867886,0.00013140812,0.00072325626,0.000045630226,0.000028015887,0.000009297205,0.000052137504,0.000025570816,0.00030589337],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.99971396,0.000059460406,0.000039767685,0.000054132244,0.000070372735,0.00006234987],"domain_scores_gemma":[0.999059,0.00038507342,0.00026581623,0.00006628993,0.000027438742,0.00019640927],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021223981,0.0016571932,0.00049312273,0.0014004955,0.0005284557,0.0004679236,0.00067608897,0.0022163296,0.0020313226],"category_scores_gemma":[0.0021051052,0.00044237383,0.00042067585,0.00066410133,0.0015891615,0.00036626434,0.00087238336,0.00093727844,0.0004177355],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001044992,0.000083615625,0.02905423,0.00010360137,0.00012398126,0.7125603,0.0005634235,0.0009800342,0.2485623,0.001696946,0.0006246449,0.0046018674],"study_design_scores_gemma":[0.00028666883,0.00038630268,0.08716912,0.000033887314,0.00019345873,0.8364986,0.00039010795,0.0030693968,0.06792689,0.0014865411,0.0024816478,0.00007746992],"about_ca_topic_score_codex":0.0012302616,"about_ca_topic_score_gemma":0.0014835664,"teacher_disagreement_score":0.0022163296,"about_ca_system_score_codex":0.00049325154,"about_ca_system_score_gemma":0.00030314474,"threshold_uncertainty_score":0.006795466},"labels":[],"label_agreement":null},{"id":"W2146233592","doi":"10.1128/jvi.74.7.3293-3300.2000","title":"The Lymphocytic Choriomeningitis Virus RING Protein Z Associates with Eukaryotic Initiation Factor 4E and Selectively Represses Translation in a RING-Dependent Manner","year":2000,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":118,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"National Cancer Institute; National Institutes of Health; Medical Research Council Canada","keywords":"Biology; Lymphocytic choriomeningitis; Protein biosynthesis; Arenavirus; Cyclin D1; Initiation factor; Promyelocytic leukemia protein; Molecular biology; Ribosomal protein; Eukaryotic initiation factor; Virology; Cell biology; Ribosome; RNA; Nuclear protein; Transcription factor; Cell; Cell cycle; Genetics; Gene","score_opus":0.011527532847588505,"score_gpt":0.23406359354399028,"score_spread":0.22253606069640178,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146233592","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99054986,0.0038877144,0.0034741967,0.00008124482,0.000032084186,0.000027813987,0.00018366407,0.00009194443,0.001671437],"genre_scores_gemma":[0.9886595,0.0016873745,0.0041938913,0.000064182954,0.00002431946,0.000048461843,0.0009662891,0.000045393546,0.004310656],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99968195,0.00005737602,0.000027871041,0.000083618994,0.00008134791,0.0000677622],"domain_scores_gemma":[0.99981827,0.0000396906,0.000060908413,0.000029071678,0.000016050328,0.000036017896],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023344014,0.00049879897,0.00036359372,0.0003848413,0.00032622204,0.0007009483,0.00035598187,0.00025893448,0.00081390544],"category_scores_gemma":[0.00022521868,0.0003387709,0.00045196028,0.0002499288,0.0003368041,0.00026318562,0.0005179353,0.00035710374,0.0006562681],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055508484,0.000015815134,0.0002895722,0.000020662283,0.0000059276335,0.000034659948,0.000006454076,0.000024546616,0.9989814,0.00007356295,0.00001797435,0.0004737722],"study_design_scores_gemma":[0.000012831597,0.00016086473,0.0068862406,0.0000067206124,0.000013584637,0.00025906094,0.000021250524,0.0009355761,0.98863775,0.00005258482,0.0030081833,0.000005392291],"about_ca_topic_score_codex":0.0008341495,"about_ca_topic_score_gemma":0.0013807735,"teacher_disagreement_score":0.0008341495,"about_ca_system_score_codex":0.00061453023,"about_ca_system_score_gemma":0.00032969666,"threshold_uncertainty_score":0.0044587255},"labels":[],"label_agreement":null},{"id":"W2146938789","doi":"10.1038/nsmb1104-1028","title":"Another detour on the Toll road to the interferon antiviral response","year":2004,"lang":"en","type":"letter","venue":"Nature Structural & Molecular Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital; McGill University","funders":"","keywords":"Interferon; Toll; Virology; Biology; Immunology","score_opus":0.006429707587115733,"score_gpt":0.27431864494987684,"score_spread":0.2678889373627611,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146938789","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0035108398,0.017242372,0.0016693847,0.9355185,0.03363679,0.0000136400195,0.000058145408,0.000091176655,0.008259133],"genre_scores_gemma":[0.11232031,0.02567466,0.0025738645,0.69618064,0.114307076,0.00007700183,0.00009577102,0.00008755517,0.048683126],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99879956,0.0003881203,0.000046948204,0.000109236375,0.00043102665,0.00022509707],"domain_scores_gemma":[0.99717253,0.001631994,0.000105166815,0.0001761747,0.00033300283,0.0005812132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017808591,0.00060936296,0.0012711836,0.00043910812,0.002304099,0.0033104317,0.0009948091,0.01192726,0.008426227],"category_scores_gemma":[0.0052795634,0.00028829678,0.00061839446,0.00023547752,0.0040237526,0.0035033755,0.0016412234,0.020124448,0.002918492],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001734287,0.00015688829,0.0008884546,0.00039671067,0.000086100925,0.0054192157,0.000331489,0.00042414124,0.010585168,0.066012196,0.8205865,0.09337887],"study_design_scores_gemma":[0.0003839824,0.00027609096,0.000986901,0.00021469241,0.000032695574,0.0028256723,0.00063186727,0.0010438565,0.0048262007,0.10666148,0.8820427,0.00007385417],"about_ca_topic_score_codex":0.0003546461,"about_ca_topic_score_gemma":0.00075439166,"teacher_disagreement_score":0.01192726,"about_ca_system_score_codex":0.001697745,"about_ca_system_score_gemma":0.0010890415,"threshold_uncertainty_score":0.028188527},"labels":[],"label_agreement":null},{"id":"W2148358971","doi":"10.1111/cge.12471","title":"Autosomal dominant <i>IFIH1</i> gain‐of‐function mutations cause Aicardi–Goutières syndrome","year":2014,"lang":"en","type":"letter","venue":"Clinical Genetics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Phenotype; Gain of function; Mutation; Genetics; Biology; Downregulation and upregulation; Gene","score_opus":0.04324994856818417,"score_gpt":0.3185212970148734,"score_spread":0.27527134844668927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2148358971","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05741424,0.0064546643,0.0024556217,0.86152166,0.04052018,0.00010778091,0.00032234934,0.0004407254,0.030762885],"genre_scores_gemma":[0.50081074,0.0096521955,0.0035507714,0.36887857,0.07578254,0.00012616135,0.00029368495,0.00015904637,0.040746268],"study_design_codex":"case_report","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995345,0.00009456688,0.000054616088,0.00008154538,0.00013311634,0.00010170869],"domain_scores_gemma":[0.9988237,0.0005617975,0.00007761416,0.00007340433,0.000255261,0.00020816574],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005195561,0.0007878547,0.00086635526,0.0006034824,0.001095546,0.0009511141,0.00077723153,0.009815071,0.00283906],"category_scores_gemma":[0.0047579175,0.00031221015,0.00077492854,0.00031343204,0.0011117725,0.0010004634,0.00039969423,0.007382981,0.0021910311],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046232468,0.0002236844,0.012776054,0.00014495455,0.0000953486,0.49143466,0.00039934853,0.0005459103,0.004250512,0.005011098,0.45011276,0.034543257],"study_design_scores_gemma":[0.00052586815,0.0005309806,0.023923686,0.0005653728,0.00021820045,0.67195135,0.0007073626,0.004861257,0.004503049,0.0150695285,0.27697045,0.00017286281],"about_ca_topic_score_codex":0.0030422546,"about_ca_topic_score_gemma":0.0026806183,"teacher_disagreement_score":0.009815071,"about_ca_system_score_codex":0.0017364731,"about_ca_system_score_gemma":0.0005699818,"threshold_uncertainty_score":0.012599111},"labels":[],"label_agreement":null},{"id":"W2148810559","doi":"10.1093/emboj/cdg524","title":"SCFHOS ubiquitin ligase mediates the ligand‐induced down‐regulation of the interferon‐α receptor","year":2003,"lang":"en","type":"article","venue":"The EMBO Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":185,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; Hakai Institute","keywords":"Library science; Biology; Medicine; Computer science","score_opus":0.014964608272951575,"score_gpt":0.23983557572342454,"score_spread":0.22487096745047297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2148810559","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99063313,0.0030062625,0.0025479025,0.00023695748,0.000072552255,0.000012775542,0.00031624944,0.00010389528,0.0030704332],"genre_scores_gemma":[0.99403495,0.00075599423,0.00056467776,0.000054774435,0.000016055135,0.000006700996,0.00044396563,0.000018046147,0.0041049384],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998311,0.00002255539,0.000012577238,0.000030858537,0.000034405064,0.00006837789],"domain_scores_gemma":[0.99987805,0.000019882658,0.000030038387,0.000022148917,0.000015221363,0.000034636872],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020728931,0.00035218333,0.00029390503,0.00020160917,0.00020890181,0.0006222649,0.00023205671,0.00038869423,0.0020719436],"category_scores_gemma":[0.00020605946,0.00019288663,0.0003518753,0.00013090442,0.00023085246,0.00030456568,0.0003471851,0.0005302777,0.0013679889],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034672537,0.000020797332,0.00049073953,0.000036663794,0.000011050553,0.00023429442,0.000009117964,0.000113549846,0.9949911,0.00052508974,0.00019663149,0.0030242053],"study_design_scores_gemma":[0.000031443273,0.00008647144,0.007396534,0.000005969807,0.000014300597,0.00078289025,0.000037793365,0.0019719126,0.9861459,0.00016388533,0.0033567762,0.0000061505984],"about_ca_topic_score_codex":0.000371492,"about_ca_topic_score_gemma":0.00038325012,"teacher_disagreement_score":0.0020719436,"about_ca_system_score_codex":0.00045254853,"about_ca_system_score_gemma":0.00017109973,"threshold_uncertainty_score":0.0069313645},"labels":[],"label_agreement":null},{"id":"W2149225711","doi":"10.1146/annurev.cellbio.22.010305.104619","title":"The Interferon-Inducible GTPases","year":2006,"lang":"en","type":"review","venue":"Annual Review of Cell and Developmental Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":166,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Medical Research Council","keywords":"Biology; GTPase; Interferon; Gene; Downregulation and upregulation; Cell biology; Small GTPase; Genetics; Signal transduction","score_opus":0.019376375012332952,"score_gpt":0.30221865399112186,"score_spread":0.2828422789787889,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149225711","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00071390974,0.98986024,0.00090416527,0.00050639786,0.0006003573,0.000013050068,0.00003742316,0.00004996028,0.007314421],"genre_scores_gemma":[0.0065543754,0.98181146,0.0010650139,0.00054319645,0.0005906689,0.000028561275,0.00010895939,0.000006685739,0.009291065],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998568,0.000018391098,0.000013802371,0.000028698216,0.00006461034,0.000017686529],"domain_scores_gemma":[0.9999205,0.000018277005,0.000018118057,0.00000582251,0.000019525922,0.000017790071],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003370119,0.0008643669,0.0008432166,0.00083571795,0.00029354042,0.00075234304,0.00063316675,0.0007937086,0.0022020221],"category_scores_gemma":[0.00024209039,0.00015859613,0.00019247545,0.0010672442,0.0005790154,0.00090835633,0.00060442125,0.0010526337,0.005165214],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008654503,0.000032319345,0.00026127652,0.0027934797,0.000031879757,0.00028457618,0.0000995487,0.00022092921,0.03448609,0.012658908,0.031118697,0.9179258],"study_design_scores_gemma":[0.0000054872326,0.000021538362,0.00043192675,0.0002694344,0.000009583595,0.0005542165,0.000027157983,0.000024224664,0.0021727788,0.0023660264,0.99411255,0.0000050708836],"about_ca_topic_score_codex":0.0003414861,"about_ca_topic_score_gemma":0.0003977322,"teacher_disagreement_score":0.0022020221,"about_ca_system_score_codex":0.0006171771,"about_ca_system_score_gemma":0.00055898185,"threshold_uncertainty_score":0.007366538},"labels":[],"label_agreement":null},{"id":"W2149378058","doi":"10.1186/cc9259","title":"Host adaptive immunity deficiency in severe pandemic influenza","year":2010,"lang":"en","type":"article","venue":"Critical Care","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":185,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"National Institutes of Health; Junta de Castilla y León; Canadian Institutes of Health Research; Li Ka Shing Foundation","keywords":"Medicine; Immune system; Immunology; Proinflammatory cytokine; Ingenuity; Acquired immune system; Antibody; Granzyme B; CD8; Inflammation","score_opus":0.027970075916908567,"score_gpt":0.3146065447324891,"score_spread":0.2866364688155805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149378058","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984309,0.00051912654,0.00029321565,0.00006539032,0.000008480697,0.000018525208,0.000114773655,0.000009862168,0.0005397169],"genre_scores_gemma":[0.9993449,0.00012295632,0.0002522373,0.000039713406,0.000010345861,0.00000786818,0.00015072194,0.0000015457309,0.00006983753],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999895,0.000031051837,0.000011021055,0.000026426389,0.000014940867,0.00002161857],"domain_scores_gemma":[0.99980384,0.000041913983,0.00007530364,0.00000962047,0.000021956175,0.000047361067],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028959595,0.00036331324,0.0002558566,0.00027040928,0.00021161926,0.00021210506,0.00014643757,0.00027698773,0.0012422783],"category_scores_gemma":[0.00048096935,0.00010273978,0.00018898422,0.00018944121,0.0002782967,0.00013947187,0.00028713755,0.00033462836,0.00015571874],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00298658,0.00018309629,0.8941035,0.00027043314,0.000105775754,0.008338805,0.00027774542,0.00047198238,0.07513528,0.00017415009,0.0006836359,0.017268984],"study_design_scores_gemma":[0.000029080638,0.0007382156,0.9809506,0.000038090842,0.000044702312,0.012746485,0.00018066785,0.00075589237,0.003648436,0.00021599018,0.0006451252,0.000006661752],"about_ca_topic_score_codex":0.00044554027,"about_ca_topic_score_gemma":0.00036487935,"teacher_disagreement_score":0.0012422783,"about_ca_system_score_codex":0.00018148331,"about_ca_system_score_gemma":0.0001768709,"threshold_uncertainty_score":0.0041558146},"labels":[],"label_agreement":null},{"id":"W2150399202","doi":"10.1128/jvi.01659-08","title":"MAVS Dimer Is a Crucial Signaling Component of Innate Immunity and the Target of Hepatitis C Virus NS3/4A Protease","year":2008,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":149,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Saint-Luc; Institute for Research in Immunology and Cancer","funders":"Centre National de la Recherche Scientifique; Canadian Liver Foundation; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Biology; Innate immune system; Cell biology; NS3; Signal transduction; Transmembrane protein; Virology; Hepatitis C virus; Virus; Receptor; Genetics","score_opus":0.0134129867105525,"score_gpt":0.23498320314152082,"score_spread":0.22157021643096833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150399202","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98037696,0.005811707,0.011405078,0.00020233814,0.000038607042,0.000024049259,0.00021324828,0.00012346514,0.0018047588],"genre_scores_gemma":[0.99469453,0.000690462,0.0029380014,0.000034187957,0.00000947044,0.000008379613,0.00050394644,0.000012600878,0.0011084274],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985564,0.000037134807,0.000007636761,0.00003198803,0.000050375525,0.000017198092],"domain_scores_gemma":[0.9999287,0.000012191896,0.000026445836,0.0000067000365,0.0000118373755,0.000014099093],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013231284,0.00032501167,0.0003006857,0.00018162596,0.0003073162,0.0003368783,0.00020514024,0.00033584939,0.0010550121],"category_scores_gemma":[0.0001748695,0.00014753822,0.00024069932,0.0001624987,0.00021528969,0.0002514446,0.0002078833,0.000372168,0.0005834194],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016572175,0.00002204084,0.0011989998,0.00006810144,0.000017432745,0.00012165545,0.000021295426,0.0005850939,0.99340993,0.00066042104,0.000103353545,0.0036259668],"study_design_scores_gemma":[0.00002883298,0.00025214316,0.011246285,0.000014246706,0.000045681416,0.0013452405,0.00012806185,0.0123409545,0.9642844,0.0015874249,0.008702979,0.000023754577],"about_ca_topic_score_codex":0.00040156927,"about_ca_topic_score_gemma":0.00034738655,"teacher_disagreement_score":0.0010550121,"about_ca_system_score_codex":0.00029672953,"about_ca_system_score_gemma":0.00021325832,"threshold_uncertainty_score":0.0035293102},"labels":[],"label_agreement":null},{"id":"W2151749514","doi":"10.1096/fj.11-202333","title":"Innate immune agonist, dsRNA, induces apoptosis in ovarian cancer cells and enhances the potency of cytotoxic chemotherapeutics","year":2012,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Discovery Centre","funders":"National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; National Cancer Institute; National Institutes of Health","keywords":"Biology; RNA silencing; Gene knockdown; Cytotoxic T cell; Receptor; TLR3; Agonist; Innate immune system; Cancer research; Molecular biology; Apoptosis; RNA interference; RNA; Toll-like receptor; Biochemistry; In vitro","score_opus":0.017593979490189548,"score_gpt":0.26012893821106264,"score_spread":0.2425349587208731,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2151749514","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99386394,0.0021286893,0.0018132888,0.00009021744,0.00003207771,0.00003169529,0.00024778052,0.000053126714,0.0017392678],"genre_scores_gemma":[0.99639064,0.000661622,0.00095180795,0.000050986684,0.00000812295,0.000036923906,0.00033353185,0.000005610046,0.0015607378],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990225,0.000020348833,0.00001303364,0.000018289487,0.000028360806,0.000017772687],"domain_scores_gemma":[0.99994886,0.00001057706,0.000012012396,0.000009816778,0.000009435923,0.000009261812],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009524665,0.00019090071,0.00019337573,0.00016703029,0.00008091222,0.00016141738,0.0000828231,0.00019268149,0.0010540632],"category_scores_gemma":[0.00008851022,0.00007664243,0.00017367177,0.00008514945,0.00008557812,0.000095623596,0.00012798121,0.0002918733,0.00023619052],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006346093,0.00002067447,0.00019755574,0.000024328674,0.000003521217,0.00001799099,0.0000056155454,0.000042981195,0.9984303,0.000026538699,0.000029827963,0.001137065],"study_design_scores_gemma":[0.000012831842,0.00038610125,0.0034535876,0.0000051910774,0.000011238743,0.00013448866,0.000020141475,0.00058185076,0.9939752,0.000028919563,0.0013886137,0.0000017983548],"about_ca_topic_score_codex":0.00012122844,"about_ca_topic_score_gemma":0.00022768331,"teacher_disagreement_score":0.0010540632,"about_ca_system_score_codex":0.00013920985,"about_ca_system_score_gemma":0.0001002016,"threshold_uncertainty_score":0.0035261512},"labels":[],"label_agreement":null},{"id":"W2153857286","doi":"10.1073/pnas.1101544108","title":"Transcription cofactors TRIM24, TRIM28, and TRIM33 associate to form regulatory complexes that suppress murine hepatocellular carcinoma","year":2011,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":217,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"Université de Strasbourg; Institut National de la Santé et de la Recherche Médicale; Institut National Du Cancer; Centre National de la Recherche Scientifique; Association pour la Recherche sur le Cancer","keywords":"Transcription factor; Biology; Subfamily; Cell biology; Somatic cell; Gene; Genetics","score_opus":0.07453003130183523,"score_gpt":0.2719438617302116,"score_spread":0.1974138304283764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153857286","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934228,0.0011805638,0.0035949391,0.00008891965,0.000018718854,0.000016644544,0.00020940416,0.00015642046,0.0013116675],"genre_scores_gemma":[0.99338347,0.00033275207,0.0018275271,0.0000409594,0.000008192458,0.000017992057,0.0005390945,0.000038196715,0.003811784],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998307,0.00002753,0.000010665224,0.00003560201,0.00003852485,0.000057017813],"domain_scores_gemma":[0.9998122,0.000013027905,0.00005729289,0.000028232475,0.000015451866,0.00007378354],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015283652,0.00031955435,0.00014288047,0.00037972213,0.00019888367,0.0002647831,0.00018048656,0.00018672468,0.0014470911],"category_scores_gemma":[0.00014971972,0.00015999613,0.00020884386,0.00012836253,0.00018346451,0.00012540948,0.00027131414,0.0005474169,0.0007523757],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046670837,0.000008522955,0.0003760391,0.000009531885,0.0000039563365,0.000026875956,0.000007702287,0.000027003205,0.9985507,0.000077071614,0.00005671616,0.0008092715],"study_design_scores_gemma":[0.000015351588,0.00009583531,0.008867393,0.0000050290114,0.000018535553,0.00038629718,0.000032002565,0.0011778286,0.98514533,0.000095455856,0.004156563,0.0000043099553],"about_ca_topic_score_codex":0.0004389767,"about_ca_topic_score_gemma":0.0007215501,"teacher_disagreement_score":0.0014470911,"about_ca_system_score_codex":0.00043607014,"about_ca_system_score_gemma":0.000147112,"threshold_uncertainty_score":0.00484097},"labels":[],"label_agreement":null},{"id":"W2154852632","doi":"10.1158/0008-5472.can-04-2223","title":"Ectopic Expression of Interferon Regulatory Factor-1 Promotes Human Breast Cancer Cell Death and Results in Reduced Expression of Survivin","year":2004,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Immunovaccine (Canada)","funders":"National Cancer Institute","keywords":"Survivin; Ectopic expression; Interferon regulatory factors; Cancer research; Human breast; Interferon; Cancer; Breast cancer; Biology; Medicine; Internal medicine; Transcription factor; Immunology; Gene; Genetics","score_opus":0.05519449552755367,"score_gpt":0.3628891065268729,"score_spread":0.3076946109993192,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154852632","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99504626,0.0020187479,0.0016027222,0.00006944077,0.00002047699,0.000017842829,0.00035500445,0.00005287826,0.00081669755],"genre_scores_gemma":[0.99568105,0.000860121,0.0012915307,0.00003511921,0.000004879166,0.000019094095,0.00071959133,0.000009477365,0.00137914],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998286,0.000022731065,0.000020653688,0.00002970044,0.000050989154,0.00004729399],"domain_scores_gemma":[0.99991965,0.000015322157,0.000026377138,0.0000130240005,0.000010338709,0.000015258625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017373571,0.00019885333,0.00028829678,0.00017972272,0.00010053199,0.00032191712,0.000112328315,0.00018037904,0.0008273516],"category_scores_gemma":[0.00011000247,0.000113433656,0.00020625544,0.00018985206,0.000107177424,0.00010417756,0.00010790994,0.00044318975,0.000458755],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000872194,0.000032922802,0.0003214403,0.00002250686,0.0000048939996,0.000045064426,0.000014482323,0.00004026979,0.99839944,0.000035322828,0.00003518844,0.00096131297],"study_design_scores_gemma":[0.000009438177,0.0002108261,0.005541916,0.000005791856,0.000014370627,0.00036707707,0.000025483392,0.0007290747,0.9911432,0.000020964084,0.0019288816,0.0000029719192],"about_ca_topic_score_codex":0.000491351,"about_ca_topic_score_gemma":0.0005251394,"teacher_disagreement_score":0.0008273516,"about_ca_system_score_codex":0.00030370304,"about_ca_system_score_gemma":0.00016757268,"threshold_uncertainty_score":0.0027677417},"labels":[],"label_agreement":null},{"id":"W2155005693","doi":"10.1128/jvi.74.8.3781-3792.2000","title":"The IRF-3 Transcription Factor Mediates Sendai Virus-Induced Apoptosis","year":2000,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":162,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Biology; Interferon regulatory factors; Jurkat cells; Transactivation; Molecular biology; Transcription factor; DNA laddering; Cell biology; IRF1; Interferon; Apoptosis; Transfection; Programmed cell death; DNA fragmentation; Virology; Cell culture; T cell; Gene; Immunology; Immune system","score_opus":0.014383176187700825,"score_gpt":0.2480307856422239,"score_spread":0.23364760945452306,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155005693","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9552502,0.005657416,0.030433333,0.00051394914,0.00016167764,0.0001246292,0.0009907711,0.00061510195,0.0062529477],"genre_scores_gemma":[0.98563683,0.0024555796,0.0068179457,0.000104077575,0.00003968244,0.00006610067,0.0011077288,0.00003631734,0.0037357036],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981517,0.000028543462,0.000011705346,0.00002873114,0.00006727777,0.00004870567],"domain_scores_gemma":[0.9998816,0.000021827913,0.00003200937,0.000018788809,0.000022034175,0.000023665747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023229668,0.00064899056,0.00025518908,0.0003195885,0.00033955646,0.00031861558,0.00026971512,0.00039603136,0.00208865],"category_scores_gemma":[0.0001569358,0.00014566048,0.0006706007,0.00016439255,0.00024658573,0.0003628112,0.00032981017,0.0010815565,0.0011070821],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011870253,0.000029898856,0.0003444192,0.000055633216,0.0000062482886,0.00010289791,0.00002110745,0.000055889057,0.99641114,0.00031943648,0.000087739034,0.0024468498],"study_design_scores_gemma":[0.000027724616,0.00017485973,0.0052053407,0.000015836984,0.000020542991,0.0007050786,0.000039310715,0.001355392,0.9876402,0.0005008912,0.004306824,0.000008094304],"about_ca_topic_score_codex":0.00026873406,"about_ca_topic_score_gemma":0.00024196485,"teacher_disagreement_score":0.00208865,"about_ca_system_score_codex":0.00047608232,"about_ca_system_score_gemma":0.00027273435,"threshold_uncertainty_score":0.0069871545},"labels":[],"label_agreement":null},{"id":"W2155157530","doi":"10.1158/0008-5472.can-09-4676","title":"Oncogenic Ras Promotes Reovirus Spread by Suppressing IFN-β Production through Negative Regulation of <i>RIG-I</i> Signaling","year":2010,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":103,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Transfection; Interferon; Viral replication; RIG-I; Virology; Virus; Signal transduction; Cell culture; RNA; Cell biology; Gene; Genetics","score_opus":0.05293381893738741,"score_gpt":0.37646630844169765,"score_spread":0.32353248950431024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155157530","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949832,0.0008532886,0.0016501489,0.000069893256,0.00001768662,0.000016021484,0.000112967304,0.00013491434,0.002161793],"genre_scores_gemma":[0.9971258,0.00046799434,0.0010169725,0.000016336442,0.0000045357315,0.000010030651,0.00012290262,0.000015008529,0.0012203612],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998863,0.00002143021,0.000012145795,0.000015239863,0.000032834734,0.00003204899],"domain_scores_gemma":[0.9999219,0.000014878762,0.000020951884,0.000014067005,0.0000087725275,0.000019273875],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009976798,0.0003723,0.00019420446,0.00021972177,0.00010824808,0.0003018274,0.00014042038,0.00015636312,0.0012393019],"category_scores_gemma":[0.00007893033,0.00010511397,0.0002520478,0.000082848856,0.00018779993,0.00016051873,0.00015973682,0.00052212604,0.0004133171],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008094636,0.000023048817,0.00010835901,0.000012115736,0.0000023273553,0.000020318777,0.0000065376953,0.000031555206,0.9986539,0.00006233112,0.000015238785,0.0009833131],"study_design_scores_gemma":[0.000011147892,0.00019555393,0.0018300806,0.0000029386713,0.000008966258,0.000150614,0.000013351062,0.00060539186,0.9961343,0.000034905323,0.0010109061,0.000001840212],"about_ca_topic_score_codex":0.0004279689,"about_ca_topic_score_gemma":0.00056688406,"teacher_disagreement_score":0.0012393019,"about_ca_system_score_codex":0.00016805207,"about_ca_system_score_gemma":0.0002026043,"threshold_uncertainty_score":0.0041458607},"labels":[],"label_agreement":null},{"id":"W2155309741","doi":"10.1196/annals.1299.042","title":"Convergence of the NF‐κB and Interferon Signaling Pathways in the Regulation of Antiviral Defense and Apoptosis","year":2003,"lang":"en","type":"review","venue":"Annals of the New York Academy of Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":106,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Interferon regulatory factors; Interferon; Sendai virus; Biology; Signal transduction; Phosphorylation; IRF1; Kinase; IRF3; Jurkat cells; Gene; Molecular biology; IκB kinase; Cell biology; Virology; Transcription factor; Virus; NF-κB; T cell; Immunology; Genetics; Immune system","score_opus":0.12467598963642033,"score_gpt":0.33945978528808496,"score_spread":0.2147837956516646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155309741","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8887535,0.07176419,0.023435924,0.0018730424,0.00033127723,0.0000623912,0.00036438167,0.00021828213,0.013197101],"genre_scores_gemma":[0.9741241,0.012133983,0.0061157797,0.00020862425,0.00013377111,0.000055380442,0.00026180423,0.0000227233,0.0069438834],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996643,0.00005281129,0.000022557564,0.00006204522,0.00012845322,0.000069834074],"domain_scores_gemma":[0.9998079,0.000024541236,0.000046562203,0.000020076865,0.000046387308,0.00005456167],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004300909,0.0003687304,0.00033310914,0.0003295078,0.0002795223,0.0006516324,0.00031618058,0.0003301093,0.0013617722],"category_scores_gemma":[0.00021897888,0.00016305373,0.00029944986,0.0001524219,0.00043893405,0.0007056228,0.00046862752,0.0008030147,0.00047965258],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00076577155,0.000060819966,0.0020316185,0.00030862313,0.000026182102,0.00039004916,0.00012863806,0.00033037315,0.96329117,0.007465896,0.00024296987,0.024957862],"study_design_scores_gemma":[0.0002510952,0.0009625824,0.07453091,0.0003277829,0.000104100225,0.0040447023,0.0005673566,0.0074886107,0.8345224,0.022970917,0.05416331,0.00006618199],"about_ca_topic_score_codex":0.00024450984,"about_ca_topic_score_gemma":0.00036116908,"teacher_disagreement_score":0.0013617722,"about_ca_system_score_codex":0.00059346174,"about_ca_system_score_gemma":0.00046641575,"threshold_uncertainty_score":0.0045555234},"labels":[],"label_agreement":null},{"id":"W2156694421","doi":"10.1093/molbev/mss123","title":"Positive Selection on the Gene RNASEL: Correlation between Patterns of Evolution and Function","year":2012,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Diabetes Canada; University of Toronto","funders":"National Natural Science Foundation of China","keywords":"Biology; Haplotype; Allele; Genetics; Gene; Genetic variation","score_opus":0.0073296843445187785,"score_gpt":0.23122993545626314,"score_spread":0.22390025111174436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156694421","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99891436,0.00038271045,0.00035986913,0.000023778708,0.0000015664655,0.0000017103191,0.000070076385,0.0000035282533,0.00024227533],"genre_scores_gemma":[0.99924916,0.00013825147,0.0003161561,0.000014972083,0.000008424439,0.0000029426385,0.00010395867,0.0000038415533,0.00016220154],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999859,0.00003343172,0.000008058965,0.000058685462,0.000023891089,0.000016954831],"domain_scores_gemma":[0.99957794,0.00013197422,0.00016037727,0.000036943908,0.00004247395,0.000050319864],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001968589,0.00013204651,0.00019181555,0.0005808408,0.00018941051,0.00025662666,0.00010510865,0.00027483643,0.0011232402],"category_scores_gemma":[0.0005549833,0.00009663669,0.000104988656,0.0006252397,0.0004156265,0.00013177117,0.00020382188,0.00026508875,0.00017493905],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006278497,0.000040374387,0.6943745,0.00007694619,0.00019459543,0.0005090887,0.00066413765,0.00041772428,0.27866006,0.00041078046,0.00012474197,0.02389919],"study_design_scores_gemma":[0.000008992609,0.00009831965,0.9919036,0.000006973619,0.000034601435,0.0013413223,0.0000871668,0.0003841282,0.0051593273,0.00025519717,0.0007113746,0.0000089848],"about_ca_topic_score_codex":0.00033391325,"about_ca_topic_score_gemma":0.0005990321,"teacher_disagreement_score":0.0011232402,"about_ca_system_score_codex":0.00012585658,"about_ca_system_score_gemma":0.000059204256,"threshold_uncertainty_score":0.0037576556},"labels":[],"label_agreement":null},{"id":"W2157191168","doi":"10.1128/jvi.00591-13","title":"Both TRIF and IPS-1 Adaptor Proteins Contribute to the Cerebral Innate Immune Response against Herpes Simplex Virus 1 Infection","year":2013,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"TRIF; Herpes simplex virus; Biology; Interferon; Signal transducing adaptor protein; Virology; TLR3; Innate immune system; Immune system; Encephalitis; Immunology; Phosphorylation; Virus; Toll-like receptor; Cell biology","score_opus":0.010150021817932023,"score_gpt":0.2425605949592957,"score_spread":0.23241057314136365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157191168","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99124956,0.0036850234,0.002524673,0.00015338427,0.00004026287,0.000049409253,0.0005337177,0.0000963295,0.0016676825],"genre_scores_gemma":[0.9908506,0.0034507725,0.0022952817,0.000095584954,0.000034918252,0.00008132841,0.0010448269,0.000028150072,0.0021182932],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998305,0.00002188902,0.0000139898,0.00002082074,0.000045912584,0.000066922104],"domain_scores_gemma":[0.99983835,0.000006979499,0.00006155502,0.000010098093,0.000021663122,0.00006131639],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001999715,0.0005561957,0.0003056198,0.00029667892,0.000119486285,0.0002991876,0.00022248084,0.00030835895,0.0009215487],"category_scores_gemma":[0.00014390225,0.00014871563,0.00022151225,0.00007431341,0.0002662892,0.0003015872,0.00039260523,0.0006078798,0.00033648073],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00062033744,0.00004304014,0.0011000795,0.00011209766,0.00001074735,0.0001846455,0.000027143265,0.000148891,0.99245256,0.0002507498,0.0001836578,0.004866086],"study_design_scores_gemma":[0.00008374418,0.0011013064,0.06852624,0.00010810526,0.00014920133,0.0027636979,0.0003497447,0.0035175553,0.9148442,0.00087005174,0.007651499,0.00003472807],"about_ca_topic_score_codex":0.00027527308,"about_ca_topic_score_gemma":0.0003959387,"teacher_disagreement_score":0.0009215487,"about_ca_system_score_codex":0.00025802167,"about_ca_system_score_gemma":0.0003049893,"threshold_uncertainty_score":0.0030828714},"labels":[],"label_agreement":null},{"id":"W2157281104","doi":"10.1128/iai.74.2.1416-1418.2006","title":"Immune Responses Induced in Cattle by Vaccination with a Recombinant Adenovirus Expressing Mycobacterial Antigen 85A and <i>Mycobacterium bovis</i> BCG","year":2006,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre","funders":"Vlaamse regering","keywords":"Mycobacterium bovis; Virology; Heterologous; Vaccination; Biology; Antigen; Immune system; BCG vaccine; Mycobacterium tuberculosis; Microbiology; Mycobacterium; Interferon gamma; Immunology; Tuberculosis; Medicine; Bacteria","score_opus":0.009968823771937058,"score_gpt":0.2359696939957137,"score_spread":0.22600087022377663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157281104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982811,0.0004947586,0.00041391942,0.000029889192,0.000022195776,0.000019551942,0.00009082943,0.000017745479,0.00063002715],"genre_scores_gemma":[0.9972785,0.00041968928,0.00064526696,0.00006690744,0.000018865217,0.000028645976,0.00022660608,0.000007894219,0.0013076019],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999632,0.00007352997,0.000018280169,0.00007234437,0.000043486816,0.0001603913],"domain_scores_gemma":[0.99974364,0.000104885585,0.000045565495,0.000017209257,0.000020734979,0.00006797856],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048095649,0.00053537445,0.00035626703,0.00040213738,0.00025497432,0.0004137598,0.00016162515,0.0006653811,0.000926991],"category_scores_gemma":[0.00032270374,0.00029183683,0.0003207845,0.0001472487,0.0004387673,0.00025121815,0.00017275877,0.0010998778,0.0003390475],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016837156,0.00023244892,0.0017875535,0.00008807096,0.000015189377,0.000082303675,0.0000934513,0.00009629691,0.9943013,0.00007238808,0.00003939757,0.0015078688],"study_design_scores_gemma":[0.0002992366,0.010299324,0.025525192,0.000057380323,0.00013585089,0.00062016747,0.00040000392,0.0011724908,0.9590465,0.00021419194,0.0022053868,0.000024390125],"about_ca_topic_score_codex":0.0012321614,"about_ca_topic_score_gemma":0.0012906361,"teacher_disagreement_score":0.0012321614,"about_ca_system_score_codex":0.0006126743,"about_ca_system_score_gemma":0.00018870225,"threshold_uncertainty_score":0.0044453144},"labels":[],"label_agreement":null},{"id":"W2159258109","doi":"10.4049/jimmunol.0900867","title":"Long Double-Stranded RNA Induces an Antiviral Response Independent of IFN Regulatory Factor 3, IFN-β Promoter Stimulator 1, and IFN","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Interferon regulatory factors; IRF1; Virology; Biology; Promoter; RNA; Transcription factor; Gene; Genetics; Gene expression","score_opus":0.019711391780660815,"score_gpt":0.27281459191093327,"score_spread":0.25310320013027243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159258109","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99470127,0.0014616175,0.002054077,0.000060144732,0.000029978717,0.000015497793,0.0001471773,0.000056980287,0.0014731648],"genre_scores_gemma":[0.9951373,0.00067405537,0.0016117077,0.000041740397,0.000019498439,0.000021877737,0.00044055737,0.000017075065,0.0020363035],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981457,0.000029387089,0.000014933911,0.000036845435,0.00006322424,0.000041117302],"domain_scores_gemma":[0.9998356,0.000029469742,0.000051945823,0.000026864485,0.00001579946,0.000040255247],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002226249,0.00039725058,0.00015334466,0.00018778203,0.00010535009,0.0002885704,0.00011099271,0.00020391343,0.0013868661],"category_scores_gemma":[0.00015293332,0.00013728236,0.00024468452,0.00006653703,0.00025535654,0.00018710304,0.00022860845,0.0004659065,0.0005270653],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000660591,0.0000097275715,0.00013093457,0.000008630068,0.0000013793657,0.000016036525,0.0000030399704,0.00000930893,0.99932337,0.000033965127,0.000006386114,0.0003910606],"study_design_scores_gemma":[0.000024528295,0.00028279578,0.0057887444,0.000008372874,0.000013089856,0.0002938494,0.00002442661,0.0005026035,0.99177843,0.000088157765,0.0011924776,0.0000025354823],"about_ca_topic_score_codex":0.00011952357,"about_ca_topic_score_gemma":0.0002365333,"teacher_disagreement_score":0.0013868661,"about_ca_system_score_codex":0.00024315472,"about_ca_system_score_gemma":0.00018905415,"threshold_uncertainty_score":0.004639566},"labels":[],"label_agreement":null},{"id":"W2159798757","doi":"10.1128/jvi.79.7.3969-3978.2005","title":"Inhibition of RIG-I-Dependent Signaling to the Interferon Pathway during Hepatitis C Virus Expression and Restoration of Signaling by IKKε","year":2005,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":168,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Albert-Ludwigs-Universität Freiburg; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"TRIF; Biology; Innate immune system; Interferon; IκB kinase; Signal transduction; Cell biology; Phosphorylation; Ectopic expression; Kinase; RIG-I; Replicon; NS3; Toll-like receptor; NF-κB; Virology; Immune system; Hepatitis C virus; Immunology; Biochemistry; Virus","score_opus":0.008184044328591867,"score_gpt":0.22865701786510542,"score_spread":0.22047297353651354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159798757","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952062,0.0011268259,0.0021277731,0.00006456997,0.000033458386,0.000028507662,0.00017328103,0.000049948125,0.0011893014],"genre_scores_gemma":[0.99605286,0.00060128636,0.0016162458,0.000033246317,0.000007747436,0.000045656485,0.00031724875,0.000013025681,0.0013126464],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998416,0.000034888686,0.000016330587,0.000018957042,0.00003375229,0.000054452736],"domain_scores_gemma":[0.99992025,0.000018970019,0.000022135471,0.000014006182,0.000008126668,0.000016475122],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001597184,0.00030327163,0.00020061796,0.00010557435,0.00011054159,0.00018850678,0.0001919061,0.00016174802,0.0007904431],"category_scores_gemma":[0.00011111873,0.00010161772,0.0002572153,0.000106747306,0.0002546284,0.00014922286,0.00013025345,0.00052834867,0.00029837294],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018698008,0.000029559695,0.000055202243,0.000029493973,0.000002846666,0.000020901696,0.000009282505,0.000041369974,0.9989681,0.00006879387,0.000015684953,0.0005718102],"study_design_scores_gemma":[0.0000137879515,0.00021631038,0.0010791194,0.0000036572187,0.0000070747155,0.00008617716,0.0000085777965,0.00048528475,0.99747676,0.000023552651,0.00059719087,0.0000024859255],"about_ca_topic_score_codex":0.00045773527,"about_ca_topic_score_gemma":0.00048287827,"teacher_disagreement_score":0.0007904431,"about_ca_system_score_codex":0.00023361048,"about_ca_system_score_gemma":0.00027695764,"threshold_uncertainty_score":0.0026443005},"labels":[],"label_agreement":null},{"id":"W2160620965","doi":"10.1074/jbc.m114.609644","title":"Crystal Structure of the Middle East Respiratory Syndrome Coronavirus (MERS-CoV) Papain-like Protease Bound to Ubiquitin Facilitates Targeted Disruption of Deubiquitinating Activity to Demonstrate Its Role in Innate Immune Suppression","year":2014,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":160,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; European Commission; Research Manitoba; Canadian Light Source","keywords":"Deubiquitinating enzyme; Middle East respiratory syndrome coronavirus; Protease; Biology; Innate immune system; Proteases; Ubiquitin; Coronavirus; Virology; Papain; Immune system; Cell biology; Gene; Biochemistry; Enzyme; Genetics","score_opus":0.03118128005313754,"score_gpt":0.2634956566169801,"score_spread":0.23231437656384257,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160620965","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933642,0.0012682772,0.0014969611,0.00040724888,0.00009178305,0.000019290068,0.00060064835,0.0001245259,0.0026269443],"genre_scores_gemma":[0.98845685,0.0012747142,0.0039470624,0.00027053908,0.000027566262,0.00003330963,0.0029906905,0.00006276569,0.0029364892],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998666,0.000014030992,0.000006417794,0.000031195745,0.0000534743,0.000028190587],"domain_scores_gemma":[0.9998647,0.000035716334,0.000025707533,0.0000065728327,0.000032417844,0.000034844576],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018969353,0.00035360613,0.0004906277,0.00012212916,0.00040282667,0.00048148975,0.00068656425,0.00051833433,0.0015317453],"category_scores_gemma":[0.0002983422,0.00024062429,0.00025141778,0.00024146959,0.00024132826,0.00031578442,0.00024963706,0.0013896278,0.00024292948],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020870813,0.0013553934,0.011100591,0.00054632797,0.00022302344,0.0035593342,0.0007792669,0.01064841,0.9460769,0.0029727325,0.0076469863,0.013003942],"study_design_scores_gemma":[0.0015148021,0.0029107311,0.073584355,0.0002046362,0.000306643,0.0046299417,0.0014632872,0.24640368,0.6280687,0.0014046405,0.03931825,0.00019029113],"about_ca_topic_score_codex":0.004083062,"about_ca_topic_score_gemma":0.005056941,"teacher_disagreement_score":0.004083062,"about_ca_system_score_codex":0.0006194884,"about_ca_system_score_gemma":0.0004540609,"threshold_uncertainty_score":0.008118629},"labels":[],"label_agreement":null},{"id":"W2160824383","doi":"10.1186/1471-2105-14-s6-s1","title":"Reconstruction of regulatory networks through temporal enrichment profiling and its application to H1N1 influenza viral infection","year":2013,"lang":"en","type":"article","venue":"BMC Bioinformatics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"National Center for Advancing Translational Sciences; National Institute of Allergy and Infectious Diseases; NIH Clinical Center; National Institutes of Health","keywords":"Biology; Gene regulatory network; Computational biology; Influenza A virus; Gene expression profiling; Transcription factor; Genome; Gene; Virology; Virus; Gene expression; Genetics","score_opus":0.014866996160236071,"score_gpt":0.25093402042136187,"score_spread":0.2360670242611258,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160824383","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35175535,0.00019710041,0.64400244,0.00011803799,0.000014313366,0.000052916115,0.0010584561,0.0019917223,0.0008096722],"genre_scores_gemma":[0.7359315,0.0002337632,0.26069397,0.00005838816,0.000013786579,0.00013821565,0.0020923577,0.0002013945,0.00063669606],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9998491,0.000049206188,0.0000073370343,0.000044838223,0.000029665973,0.000019822293],"domain_scores_gemma":[0.9994017,0.0004108518,0.0000633215,0.00004266004,0.00005145945,0.000030118083],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052176334,0.0003675743,0.00031071831,0.0006660977,0.00027832616,0.0003794891,0.00037232877,0.00030718435,0.00072243076],"category_scores_gemma":[0.0015708429,0.00024718925,0.0007985405,0.0005996404,0.00028676767,0.00018240731,0.0003773905,0.00042651943,0.00017865843],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031178218,0.00010341235,0.018101308,0.00018596568,0.00014522411,0.00017592576,0.00022076686,0.8207145,0.100492254,0.0051659867,0.00051586534,0.053867064],"study_design_scores_gemma":[0.00000493226,0.00002000692,0.0024331023,0.0000026999658,0.000012176369,0.00002133631,0.000019366402,0.9880782,0.007314488,0.0015966516,0.0004899464,0.000007109393],"about_ca_topic_score_codex":0.005053082,"about_ca_topic_score_gemma":0.0061193346,"teacher_disagreement_score":0.005053082,"about_ca_system_score_codex":0.00049862853,"about_ca_system_score_gemma":0.00062841765,"threshold_uncertainty_score":0.010047317},"labels":[],"label_agreement":null},{"id":"W2161340928","doi":"10.1371/journal.pbio.1001249","title":"Stochastic Expression of the Interferon-β Gene","year":2012,"lang":"en","type":"article","venue":"PLoS Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":133,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Deutsche Forschungsgemeinschaft; McGill University","keywords":"Biology; Sendai virus; Interferon; Gene expression; Cell sorting; Gene; Viral replication; Cell biology; Virus; RNA; Virology; Cell; Molecular biology; Genetics","score_opus":0.021448962162757462,"score_gpt":0.2471771551802717,"score_spread":0.22572819301751423,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161340928","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95974565,0.0015703375,0.03648881,0.000072105235,0.000033350356,0.000037855836,0.0003929693,0.00011637211,0.0015426485],"genre_scores_gemma":[0.9875674,0.0010707838,0.009153717,0.000057863395,0.0000123529935,0.00004248973,0.0005986403,0.00003120368,0.0014654197],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997626,0.00002772393,0.000021461017,0.000059601774,0.00009623445,0.0000325097],"domain_scores_gemma":[0.99987197,0.000026527743,0.00004873655,0.000023661456,0.000013271734,0.000015862599],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020577556,0.00020615163,0.00024885286,0.00017472118,0.00015038892,0.00042510053,0.00017511411,0.00023262516,0.00040717333],"category_scores_gemma":[0.00019734002,0.00016473101,0.00025914292,0.0001723402,0.00027205836,0.00014736346,0.00033424958,0.0004890169,0.00025855974],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018622224,0.0000032654125,0.00038219435,0.000009848258,0.0000025507081,0.000017927907,0.0000062587396,0.00007229764,0.99843484,0.00021320586,0.000008596458,0.00083042326],"study_design_scores_gemma":[0.0000070722895,0.00011708433,0.006940558,0.000009046002,0.000015048894,0.00046219272,0.000034353172,0.0026411596,0.9852555,0.0004395116,0.004070233,0.000008348059],"about_ca_topic_score_codex":0.0001895892,"about_ca_topic_score_gemma":0.00026670715,"teacher_disagreement_score":0.00042510053,"about_ca_system_score_codex":0.000289644,"about_ca_system_score_gemma":0.00018806854,"threshold_uncertainty_score":0.0021015406},"labels":[],"label_agreement":null},{"id":"W2161435619","doi":"10.1038/emboj.2012.274","title":"RIG‐I detects infection with live Listeria by sensing secreted bacterial nucleic acids","year":2012,"lang":"en","type":"article","venue":"The EMBO Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":176,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; Bundesministerium für Bildung und Forschung","keywords":"Biology; Nucleic acid; Listeria; Microbiology; Listeria monocytogenes; Bacteria; Listeria infection; Biochemistry; Genetics","score_opus":0.010528322750993625,"score_gpt":0.22842589287093154,"score_spread":0.2178975701199379,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161435619","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97375745,0.0047945646,0.010840683,0.00053385645,0.00023918116,0.00006341976,0.00062556594,0.00038238763,0.008762891],"genre_scores_gemma":[0.9903032,0.0009257329,0.0035851626,0.00024791778,0.00008354208,0.000056342848,0.0007530341,0.000046461115,0.0039984286],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99933606,0.00018225564,0.000044476725,0.00010137236,0.00012814677,0.00020770227],"domain_scores_gemma":[0.999634,0.00007185426,0.0001061515,0.00006557759,0.000047987112,0.000074285344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00078028196,0.00087302737,0.0004009253,0.0007638351,0.00025795796,0.0010306347,0.000531399,0.0015037454,0.0034816668],"category_scores_gemma":[0.00076410885,0.00040862666,0.00063151814,0.0002693055,0.00083565025,0.00082312134,0.0008916151,0.0011378872,0.002301507],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006538592,0.000025442734,0.0013902413,0.000054901826,0.000012787481,0.00014259353,0.000048000526,0.00005113193,0.9941713,0.00028808613,0.00011997438,0.0030416907],"study_design_scores_gemma":[0.00006246967,0.00043984456,0.009077741,0.000042158383,0.000044554843,0.0008630813,0.00019960746,0.0012883632,0.985193,0.0007017106,0.002065094,0.000022509334],"about_ca_topic_score_codex":0.0001618787,"about_ca_topic_score_gemma":0.00021616841,"teacher_disagreement_score":0.0034816668,"about_ca_system_score_codex":0.0007975841,"about_ca_system_score_gemma":0.00021681738,"threshold_uncertainty_score":0.011647284},"labels":[],"label_agreement":null},{"id":"W2161709887","doi":"10.1158/1535-7163.mct-11-0077","title":"Characterization of the Oncogenic Activity of the Novel <i>TRIM59</i> Gene in Mouse Cancer Models","year":2011,"lang":"en","type":"article","venue":"Molecular Cancer Therapeutics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Queen's University; Sunnybrook Health Science Centre; Lawson Health Research Institute","funders":"National Cancer Institute; Canadian Institutes of Health Research","keywords":"Biology; Carcinogenesis; Gene knockdown; Oncogene; Cancer research; Downregulation and upregulation; Cell cycle; Small hairpin RNA; Gene; Transgene; Molecular biology; Cell biology; Genetics","score_opus":0.045084547340752734,"score_gpt":0.26068970851791384,"score_spread":0.2156051611771611,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161709887","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97882587,0.0017573377,0.013345446,0.0003200826,0.000064190135,0.00015418339,0.0024545004,0.0003876185,0.0026907725],"genre_scores_gemma":[0.9766519,0.0016003567,0.009845051,0.00021751174,0.000024455045,0.00019919038,0.0035174557,0.00012044224,0.007823567],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998356,0.000018003226,0.000017863344,0.000045093628,0.00004212715,0.00004127477],"domain_scores_gemma":[0.99983656,0.00001747897,0.000051122046,0.000022076088,0.000020898351,0.000051854455],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001766102,0.00031250645,0.00022861129,0.0005775476,0.00020657801,0.0002790707,0.00028183137,0.00045054767,0.0016559868],"category_scores_gemma":[0.00011101112,0.00017319518,0.00046641505,0.00021786243,0.00024861735,0.00019596428,0.00016916798,0.0007771497,0.0007529222],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044296863,0.00001806035,0.00013387609,0.000018039746,0.0000034902837,0.000051632836,0.000006463384,0.000029220557,0.99895775,0.00009515689,0.000034753026,0.0006073163],"study_design_scores_gemma":[0.000011251118,0.00024922483,0.003134035,0.000006401151,0.000022450375,0.0005334977,0.000019153877,0.0007439933,0.99191463,0.00004622118,0.0033155119,0.0000036231163],"about_ca_topic_score_codex":0.00058324594,"about_ca_topic_score_gemma":0.0006031104,"teacher_disagreement_score":0.0016559868,"about_ca_system_score_codex":0.0003915508,"about_ca_system_score_gemma":0.0001565241,"threshold_uncertainty_score":0.0055398345},"labels":[],"label_agreement":null},{"id":"W2162432199","doi":"10.1371/journal.ppat.1003981","title":"Human Genome-Wide RNAi Screen Identifies an Essential Role for Inositol Pyrophosphates in Type-I Interferon Response","year":2014,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital","funders":"National Institute of Mental Health; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Wellcome Trust","keywords":"IRF3; Interferon; Inositol; Biology; Interferon regulatory factors; Inositol phosphate; Cell biology; Signal transduction; Transcription factor; Biochemistry; Receptor; Gene; Virology","score_opus":0.01431315658905343,"score_gpt":0.25981230504223807,"score_spread":0.24549914845318463,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162432199","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9754133,0.0048414916,0.0076494715,0.00026216797,0.00003669028,0.000081479,0.0065740095,0.0007178742,0.0044235154],"genre_scores_gemma":[0.9813098,0.0026135948,0.0057257465,0.00026022075,0.000014091877,0.000059007947,0.0075907405,0.00006687242,0.002360023],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998982,0.0000099933495,0.00000994198,0.000028884993,0.000037573423,0.000015462763],"domain_scores_gemma":[0.99993205,0.000014365489,0.000023652026,0.0000071392524,0.00000852165,0.000014368037],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011539669,0.00045328683,0.00034026016,0.00036397396,0.00015327231,0.00032317112,0.00018504974,0.00027177887,0.0013614849],"category_scores_gemma":[0.00011204676,0.00017593488,0.0003002566,0.00026660674,0.0001199634,0.00008692624,0.00020670924,0.00036686033,0.0005781154],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015892663,0.000023667095,0.001133371,0.00006290758,0.000025758565,0.0002750422,0.000005974701,0.00013253893,0.9928906,0.0001052355,0.00024493388,0.004941039],"study_design_scores_gemma":[0.000048152015,0.00020584467,0.038136013,0.00001730389,0.0001893704,0.0011526963,0.000021739486,0.0018229054,0.95080876,0.0002027036,0.0073794164,0.000015060629],"about_ca_topic_score_codex":0.00066408515,"about_ca_topic_score_gemma":0.0013652021,"teacher_disagreement_score":0.0013614849,"about_ca_system_score_codex":0.00026322776,"about_ca_system_score_gemma":0.00030372592,"threshold_uncertainty_score":0.0045546293},"labels":[],"label_agreement":null},{"id":"W2162986431","doi":"10.1038/sj.embor.7400891","title":"Interferons induce tyrosine phosphorylation of the eIF2α kinase PKR through activation of Jak1 and Tyk2","year":2007,"lang":"en","type":"article","venue":"EMBO Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital","funders":"National Cancer Institute; Terry Fox Foundation; Cancer Research Society","keywords":"Protein kinase R; Phosphorylation; Tyrosine phosphorylation; Biology; Cell biology; Protein tyrosine phosphatase; EIF-2 kinase; eIF2; Interferon; Tyrosine; Phosphorylation cascade; Protein kinase A; Protein phosphorylation; Translation (biology); Biochemistry; Mitogen-activated protein kinase kinase; Cyclin-dependent kinase 2; Messenger RNA; Virology","score_opus":0.014916279976652706,"score_gpt":0.25914143185165683,"score_spread":0.24422515187500413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162986431","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96951026,0.012920694,0.0058202343,0.0006102291,0.00042827814,0.00008700144,0.0009037642,0.00019199541,0.009527481],"genre_scores_gemma":[0.9882157,0.0030908505,0.0017514183,0.00011671062,0.00007515939,0.000049872804,0.0007898146,0.000035279147,0.0058751893],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99973243,0.00005074104,0.00002179217,0.000031687166,0.000055221935,0.00010817603],"domain_scores_gemma":[0.9998349,0.000029827082,0.000059514863,0.000020680824,0.000019853382,0.000035146404],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031861346,0.0005370447,0.00022940761,0.0003902955,0.00026546736,0.00041602863,0.00010716863,0.00025929467,0.0026971214],"category_scores_gemma":[0.00024001436,0.00022861848,0.00052580656,0.00017615275,0.00022686008,0.00033091847,0.0005247014,0.000785831,0.00093480136],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011267184,0.00005825573,0.00063968747,0.00011192105,0.000017926282,0.00014318443,0.000024921335,0.00014517957,0.99197817,0.0003895714,0.00030453198,0.0050599077],"study_design_scores_gemma":[0.00016528998,0.00026677357,0.022635262,0.000026826105,0.000024580655,0.00054942555,0.00008167246,0.0010579098,0.9684723,0.00046630343,0.006241112,0.000012492262],"about_ca_topic_score_codex":0.00022111366,"about_ca_topic_score_gemma":0.0004896979,"teacher_disagreement_score":0.0026971214,"about_ca_system_score_codex":0.0004562772,"about_ca_system_score_gemma":0.0002078835,"threshold_uncertainty_score":0.009022713},"labels":[],"label_agreement":null},{"id":"W2164022414","doi":"10.1128/mcb.21.1.73-80.2001","title":"p45 <sup>NFE2</sup> Is a Negative Regulator of Erythroid Proliferation Which Contributes to the Progression of Friend Virus-Induced Erythroleukemias","year":2001,"lang":"en","type":"article","venue":"Molecular and Cellular Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Health Sciences Centre; Sunnybrook Health Science Centre","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; Medical Research Council; National Institutes of Health; Medical Research Council Canada","keywords":"Friend virus; Biology; Molecular biology; Cell culture; Mutant; Virus; Wild type; Gene; Cell growth; Murine leukemia virus; Virology; Genetics","score_opus":0.008467550324504833,"score_gpt":0.25052112704640644,"score_spread":0.24205357672190161,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164022414","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929304,0.001434492,0.0039065746,0.000068839945,0.000020060294,0.000022519147,0.00034800838,0.00011193141,0.0011571978],"genre_scores_gemma":[0.9940789,0.00054405886,0.0023291335,0.00003107213,0.000014331253,0.000027995296,0.0007380764,0.000033334196,0.0022030857],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987185,0.00002264062,0.000014537637,0.00002782916,0.00004127961,0.000021856404],"domain_scores_gemma":[0.9998691,0.00002011829,0.0000458329,0.000015594274,0.00000886978,0.000040479765],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012248979,0.00054880267,0.00019016275,0.00020694057,0.00016409889,0.00026141427,0.00014526656,0.00019283955,0.0010368406],"category_scores_gemma":[0.0000999063,0.00012700695,0.00016827752,0.000078916404,0.00017186611,0.00012085436,0.00020085722,0.00034210098,0.00046096652],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033610828,0.000009255927,0.0001933821,0.0000074193945,0.0000012143635,0.000046853394,0.0000029797015,0.000014528797,0.99922955,0.000034542423,0.000014554009,0.0004121289],"study_design_scores_gemma":[0.000014660399,0.00014551106,0.008639303,0.000005113467,0.000009994883,0.0015485457,0.000017391434,0.0010625207,0.98578644,0.000050933882,0.0027158575,0.0000037344907],"about_ca_topic_score_codex":0.00027923915,"about_ca_topic_score_gemma":0.0004019021,"teacher_disagreement_score":0.0010368406,"about_ca_system_score_codex":0.00018346451,"about_ca_system_score_gemma":0.00008771511,"threshold_uncertainty_score":0.0034686327},"labels":[],"label_agreement":null},{"id":"W2165829386","doi":"10.1096/fj.10-158766","title":"MAP kinase‐activated protein kinases 2 and 3 are required for influenza A virus propagation and act <i>via</i> inhibition of PKR","year":2010,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital","funders":"Graduate School, University of Texas, Austin; Bundesministerium für Forschung und Technologie; Deutsche Forschungsgemeinschaft; Centre for Interdisciplinary Research in Rehabilitation","keywords":"Protein kinase R; EIF-2 kinase; Protein kinase A; Biology; Kinase; Interferon; Virology; Antiviral protein; Cell biology; Virus; Mitogen-activated protein kinase kinase; Cyclin-dependent kinase 2; RNA; Biochemistry; Gene","score_opus":0.015517148364276688,"score_gpt":0.24885475477796568,"score_spread":0.23333760641368897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165829386","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9905828,0.0015421637,0.0032846585,0.00026755835,0.000118907104,0.000049608334,0.0012167845,0.00024433312,0.0026931309],"genre_scores_gemma":[0.9936412,0.0003714134,0.002015098,0.000075604185,0.00001620658,0.0000533812,0.0010969786,0.000035869733,0.002694283],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986553,0.000020588157,0.000016218051,0.000021187498,0.00003897728,0.000037531012],"domain_scores_gemma":[0.99985135,0.000017045964,0.000043826134,0.000016462094,0.00001517462,0.000056104167],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012491013,0.00032551837,0.00015933887,0.00016945988,0.00023662127,0.00037674187,0.0002394228,0.00025224613,0.0022645213],"category_scores_gemma":[0.00012670369,0.00017229501,0.00034065938,0.00006724854,0.00020045086,0.00020831764,0.00018985114,0.0006103136,0.001004468],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022330561,0.0000333398,0.00020082074,0.000018261522,0.0000025737247,0.000050912997,0.000005214559,0.000031177806,0.99881905,0.00010090305,0.00011025813,0.00040417284],"study_design_scores_gemma":[0.000030454481,0.00019930156,0.010488616,0.0000066937528,0.000009177336,0.00048652114,0.000029784887,0.001338632,0.98388207,0.00010612672,0.0034173694,0.000005266764],"about_ca_topic_score_codex":0.0007950425,"about_ca_topic_score_gemma":0.0010261544,"teacher_disagreement_score":0.0022645213,"about_ca_system_score_codex":0.00044683236,"about_ca_system_score_gemma":0.00026332165,"threshold_uncertainty_score":0.007575631},"labels":[],"label_agreement":null},{"id":"W2167113550","doi":"10.1177/1753425912467383","title":"NLRX1 does not inhibit MAVS-dependent antiviral signalling","year":2012,"lang":"en","type":"article","venue":"Innate Immunity","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":90,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Biology; Sendai virus; Cell biology; Mitochondrion; Intracellular; Knockout mouse; HEK 293 cells; Virus; Virology; Cell culture; Receptor; Genetics","score_opus":0.02049241695497596,"score_gpt":0.26126536653668136,"score_spread":0.24077294958170542,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167113550","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99193394,0.0026948927,0.0020479865,0.0004282484,0.00007881311,0.000045225683,0.00040842514,0.00017353351,0.0021888942],"genre_scores_gemma":[0.99200046,0.0010708905,0.0017034338,0.00013416413,0.000043080894,0.00006010821,0.0009427764,0.00003719217,0.004007954],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996774,0.000085115746,0.000040024992,0.00003934577,0.000089290326,0.00006878004],"domain_scores_gemma":[0.999637,0.00012903166,0.00007284875,0.00006596883,0.000034520966,0.00006058826],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034202353,0.00032647437,0.0005674184,0.00019584231,0.00013690417,0.00041707937,0.00039204367,0.00043813203,0.001498209],"category_scores_gemma":[0.00035643642,0.00012028596,0.00026305768,0.00011639407,0.0004076419,0.0002607104,0.00018179975,0.00099189,0.0006560267],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035076006,0.00009349833,0.00011506316,0.00007874693,0.000011931364,0.00006347826,0.000026901183,0.0000917451,0.99719065,0.00014351451,0.00014068194,0.0016930522],"study_design_scores_gemma":[0.00011559355,0.00091402314,0.0011971043,0.000012821344,0.000019153586,0.00032454403,0.000033761837,0.000997595,0.99298793,0.00008758131,0.003304758,0.0000050981503],"about_ca_topic_score_codex":0.00027064682,"about_ca_topic_score_gemma":0.00039800114,"teacher_disagreement_score":0.001498209,"about_ca_system_score_codex":0.00021997289,"about_ca_system_score_gemma":0.000275569,"threshold_uncertainty_score":0.0050120354},"labels":[],"label_agreement":null},{"id":"W2167179647","doi":"10.1016/j.febslet.2006.02.076","title":"<i>N</i>‐Myristoyltransferase 2 expression in human colon cancer: Cross‐talk between the calpain and caspase system","year":2006,"lang":"en","type":"article","venue":"FEBS Letters","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saskatchewan Cancer Agency; University of Saskatchewan","funders":"","keywords":"Calpain; Western blot; Signal transduction; Apoptosis; Colorectal cancer; Enzyme; Cell biology; Kinase; Pathogenesis; Biology; Chemistry; Molecular biology; Cancer; Cancer research; Biochemistry; Gene; Genetics; Immunology","score_opus":0.007931797808867602,"score_gpt":0.2468031989185785,"score_spread":0.2388714011097109,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167179647","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99895287,0.0004995254,0.00015758743,0.000036761998,0.00000342742,0.0000031957336,0.00004167178,0.000007616445,0.0002973847],"genre_scores_gemma":[0.99909127,0.0002406167,0.000202372,0.000016888627,0.000005849303,0.0000044180865,0.00010146193,0.0000015983208,0.00033547689],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999374,0.000014035719,0.000005558071,0.00001391282,0.000011059237,0.000017926945],"domain_scores_gemma":[0.9999056,0.000017720855,0.000029169729,0.000009474468,0.000012387939,0.000025613313],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010901131,0.00015054099,0.00012567788,0.00037095358,0.00014597764,0.00021003104,0.000054244705,0.00027067057,0.0010060502],"category_scores_gemma":[0.00019732496,0.0001115688,0.00010626925,0.00017154326,0.00015825745,0.00010089241,0.00009091304,0.00017933293,0.00018018203],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00069642806,0.00002966328,0.01346435,0.000034720262,0.000011296921,0.00081302633,0.00004243351,0.000029265708,0.9833831,0.000032043663,0.000070555485,0.0013930427],"study_design_scores_gemma":[0.0000973944,0.0008379927,0.4324201,0.000011866073,0.00006917622,0.013999514,0.0002965404,0.0013222963,0.54859596,0.0001439002,0.002194709,0.000010547063],"about_ca_topic_score_codex":0.0007728327,"about_ca_topic_score_gemma":0.000724389,"teacher_disagreement_score":0.0010060502,"about_ca_system_score_codex":0.00021722524,"about_ca_system_score_gemma":0.00008500569,"threshold_uncertainty_score":0.0033655167},"labels":[],"label_agreement":null},{"id":"W2167321515","doi":"10.1128/mcb.01805-08","title":"Differential Regulation of Human Interferon A Gene Expression by Interferon Regulatory Factors 3 and 7","year":2009,"lang":"en","type":"article","venue":"Molecular and Cellular Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Cancer Institute; Ligue Contre le Cancer; Canadian Institutes of Health Research; Centre National de la Recherche Scientifique; Association pour la Recherche sur le Cancer","keywords":"Interferon regulatory factors; IRF1; Biology; Promoter; IRF8; Interferon-stimulated gene; Gene expression; IRF7; Regulation of gene expression; Molecular biology; Gene; Interferon; Chromatin immunoprecipitation; Regulatory sequence; Transcription factor; IRF4; Genetics; Innate immune system","score_opus":0.006508536066943823,"score_gpt":0.22209789656614423,"score_spread":0.2155893604992004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167321515","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991002,0.0026988855,0.0034840724,0.00006778281,0.000055135573,0.000027702896,0.00037641943,0.00005823799,0.002229769],"genre_scores_gemma":[0.9917115,0.0009901025,0.0036985679,0.00013185535,0.000030091818,0.00006591709,0.0011837889,0.000032023687,0.002156104],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99975616,0.000054757453,0.000014913057,0.000044029322,0.000055338653,0.00007484449],"domain_scores_gemma":[0.9998356,0.000048663627,0.00003066093,0.00001518395,0.000029323177,0.000040576466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017648091,0.00024669155,0.0001720281,0.00023090793,0.00012466169,0.00031551,0.000121734665,0.00022879335,0.0009847878],"category_scores_gemma":[0.00020030182,0.00013200447,0.00036472548,0.00012320177,0.00017006202,0.00014317397,0.00019252207,0.00037212545,0.0005102815],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002183224,0.000012551681,0.00032537355,0.000016707834,0.0000035390376,0.000027001039,0.000011425711,0.00003408866,0.997869,0.000109399385,0.00003476299,0.001337712],"study_design_scores_gemma":[0.00004101272,0.0003184191,0.01959961,0.000024002169,0.000022618293,0.00028597398,0.0000713821,0.001585143,0.9737741,0.00029993858,0.003965285,0.000012545781],"about_ca_topic_score_codex":0.0002586986,"about_ca_topic_score_gemma":0.0003718332,"teacher_disagreement_score":0.0009847878,"about_ca_system_score_codex":0.00030886618,"about_ca_system_score_gemma":0.0001777009,"threshold_uncertainty_score":0.003294468},"labels":[],"label_agreement":null},{"id":"W2167417098","doi":"10.1016/j.molmed.2005.12.003","title":"MasterCARD: a priceless link to innate immunity","year":2006,"lang":"en","type":"review","venue":"Trends in Molecular Medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":193,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Innate immune system; Biology; Cell biology; RIG-I; Signal transducing adaptor protein; MDA5; NS3; RNA; Acquired immune system; Interferon; Virology; Immune system; Signal transduction; RNA interference; Gene; Hepatitis C virus; Virus; Immunology; Genetics","score_opus":0.037344495042704685,"score_gpt":0.3508668926484409,"score_spread":0.3135223976057362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167417098","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00044158223,0.98289144,0.0012738999,0.0046519446,0.006324864,0.000013564759,0.000033997952,0.00004284501,0.0043258974],"genre_scores_gemma":[0.003327312,0.97634584,0.0010119315,0.004784886,0.0063187424,0.000025182277,0.0000669351,0.000012730153,0.008106588],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997478,0.00003684691,0.000025186235,0.000045097837,0.000115950854,0.000029096034],"domain_scores_gemma":[0.9995623,0.00020142358,0.00006732486,0.000022362135,0.00007241622,0.00007412829],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009589521,0.001010633,0.0015144828,0.00082483306,0.00035527314,0.001866408,0.0014327631,0.0024776692,0.008713855],"category_scores_gemma":[0.001511756,0.0002750884,0.0002884546,0.001019024,0.001388005,0.0032478708,0.0010094667,0.00405187,0.00376475],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024990097,0.000062170635,0.0001365031,0.0035365722,0.00004370139,0.00036208294,0.000041346535,0.00021677262,0.006511085,0.020558873,0.1093428,0.85893816],"study_design_scores_gemma":[0.00006294543,0.000097363845,0.0003256362,0.00073836045,0.00004295081,0.0008632489,0.000029379318,0.000108575485,0.0012288322,0.008763252,0.9877252,0.000014116342],"about_ca_topic_score_codex":0.00020726203,"about_ca_topic_score_gemma":0.00035980693,"teacher_disagreement_score":0.008713855,"about_ca_system_score_codex":0.00073325523,"about_ca_system_score_gemma":0.0009014214,"threshold_uncertainty_score":0.029150724},"labels":[],"label_agreement":null},{"id":"W2169830762","doi":"10.1136/jmg.40.3.183","title":"Cree encephalitis is allelic with Aicardi-Goutiéres syndrome: implications for the pathogenesis of disorders of interferon alpha metabolism","year":2003,"lang":"en","type":"article","venue":"Journal of Medical Genetics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":108,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Niskamoon Corporation; Montreal Neurological Institute and Hospital","funders":"Medical Research Council; Wellcome Trust","keywords":"Lymphocytosis; Encephalitis; Immunology; Allele; Encephalopathy; Locus (genetics); Pathology; Cerebrospinal fluid; Phenotype; Pathogenesis; Biology; Medicine; Genetics; Gene; Virus; Internal medicine","score_opus":0.01587141608386971,"score_gpt":0.2782370802896913,"score_spread":0.2623656642058216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169830762","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99578935,0.00070878863,0.0005585389,0.00026755984,0.000014851137,0.000023554305,0.000057536297,0.00004119399,0.0025386508],"genre_scores_gemma":[0.99831855,0.00035978883,0.000637573,0.00011309904,0.00006204963,0.000009768021,0.00007183098,0.000010087226,0.00041739616],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.99970764,0.00007792118,0.000025138812,0.00006275334,0.00005372801,0.00007278376],"domain_scores_gemma":[0.9993511,0.00025341258,0.00021857201,0.00004575065,0.000035415862,0.00009576455],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022106875,0.0008057956,0.00056842907,0.0011739754,0.000494071,0.00043627448,0.0002694802,0.0012092803,0.002728646],"category_scores_gemma":[0.0016186945,0.0002681224,0.00024983016,0.0008105781,0.0010895821,0.00042461272,0.00051882095,0.0006187862,0.00030960856],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017360694,0.00032184803,0.23736098,0.00027180646,0.00022831347,0.5987607,0.00115631,0.00057432003,0.13127084,0.00277979,0.0009866712,0.024552274],"study_design_scores_gemma":[0.00021677087,0.00029647833,0.26508942,0.00007729019,0.0001392693,0.7224605,0.00038672236,0.0010375067,0.0059964624,0.0017059831,0.0025536483,0.000039923856],"about_ca_topic_score_codex":0.0010614299,"about_ca_topic_score_gemma":0.00103368,"teacher_disagreement_score":0.002728646,"about_ca_system_score_codex":0.0002692293,"about_ca_system_score_gemma":0.0002304643,"threshold_uncertainty_score":0.009128213},"labels":[],"label_agreement":null},{"id":"W2169949084","doi":"10.1128/jvi.76.22.11688-11703.2002","title":"Age-Dependent Resistance to Lethal Alphavirus Encephalitis in Mice: Analysis of Gene Expression in the Central Nervous System and Identification of a Novel Interferon-Inducible Protective Gene, Mouse<i>ISG12</i>","year":2002,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":126,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Columbia College","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Biology; Sindbis virus; Alphavirus infection; Alphavirus; Virology; ISG15; Interferon; Gene expression; Immunology; Virus; Encephalitis; Gene; Genetics","score_opus":0.020259103985022234,"score_gpt":0.25660537198653716,"score_spread":0.23634626800151493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169949084","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99633247,0.0006871408,0.0015193818,0.000051215236,0.000012716035,0.000036190082,0.00081231346,0.000047326794,0.00050119404],"genre_scores_gemma":[0.98294365,0.0016449796,0.004859637,0.00013094937,0.000023078012,0.00024203675,0.003342167,0.00008067464,0.006732848],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997516,0.00002520815,0.000028676975,0.000077219294,0.000049115224,0.00006811415],"domain_scores_gemma":[0.99976355,0.000022610548,0.00010986086,0.000020116855,0.000024196212,0.000059660233],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020348845,0.00055083336,0.0002718196,0.00077806565,0.00019284525,0.00032117462,0.00023040411,0.00045590545,0.00095297315],"category_scores_gemma":[0.00012412471,0.00027613185,0.0005114587,0.00032045037,0.00031431086,0.0003210029,0.00016665913,0.00068611157,0.00033859123],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000079753925,0.000017100147,0.0002283902,0.000008840891,0.0000023151604,0.000014865553,0.000010035024,0.000011605614,0.9993411,0.000016428843,0.0000066050475,0.00026305957],"study_design_scores_gemma":[0.000028741666,0.00089823926,0.04081681,0.00001080377,0.000037550388,0.00045776353,0.000057108628,0.0005643689,0.9558627,0.00005850146,0.0011976854,0.000009746923],"about_ca_topic_score_codex":0.0005365686,"about_ca_topic_score_gemma":0.00088355085,"teacher_disagreement_score":0.00095297315,"about_ca_system_score_codex":0.0003408078,"about_ca_system_score_gemma":0.00015775574,"threshold_uncertainty_score":0.0031879544},"labels":[],"label_agreement":null},{"id":"W2170522795","doi":"10.1016/j.cytogfr.2007.06.002","title":"Convergence of the NF-κB and IRF pathways in the regulation of the innate antiviral response","year":2007,"lang":"en","type":"review","venue":"Cytokine & Growth Factor Reviews","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":242,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital; McGill University","funders":"Canadian Institutes of Health Research; Canadian Foundation for AIDS Research","keywords":"Interferon regulatory factors; Biology; TANK-binding kinase 1; Kinase; IκB kinase; Transcription factor; Phosphorylation; Interferon; Signal transduction; Promoter; Cell biology; Transcriptional regulation; Innate immune system; NF-κB; Gene; Genetics; Gene expression; Protein kinase A; Receptor; MAP kinase kinase kinase","score_opus":0.07045438817607706,"score_gpt":0.31856698598034594,"score_spread":0.24811259780426886,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2170522795","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00034465035,0.9960557,0.00071861857,0.00052265683,0.00075148547,0.0000048308543,0.00001109204,0.000017692704,0.0015731785],"genre_scores_gemma":[0.0015538934,0.99547356,0.000680098,0.00023742847,0.00082577317,0.000007276189,0.000029432085,0.0000029415964,0.001189502],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99973696,0.00003612012,0.000029561435,0.0000449903,0.0001224868,0.000029864179],"domain_scores_gemma":[0.99961996,0.00012795858,0.00005244838,0.000014614785,0.00012088688,0.00006420988],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010306613,0.001241033,0.0017075747,0.00090549706,0.0003029246,0.0013494189,0.0015512864,0.001280842,0.0025984664],"category_scores_gemma":[0.00049194833,0.00030972928,0.00035135637,0.0011253415,0.00086169917,0.0019241413,0.00081560336,0.0024458636,0.0027723021],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025595672,0.000058273654,0.00015908835,0.005177588,0.000062945655,0.00039113977,0.00006667022,0.0004454029,0.014174394,0.011019708,0.026353674,0.9418351],"study_design_scores_gemma":[0.000052116153,0.00008952324,0.0011318547,0.001159213,0.00006638807,0.001847938,0.00008629982,0.00016661812,0.002988813,0.0066691027,0.98571235,0.000029933784],"about_ca_topic_score_codex":0.0005770191,"about_ca_topic_score_gemma":0.0008440961,"teacher_disagreement_score":0.0025984664,"about_ca_system_score_codex":0.0009349073,"about_ca_system_score_gemma":0.0011892625,"threshold_uncertainty_score":0.008692741},"labels":[],"label_agreement":null},{"id":"W2170580103","doi":"10.1126/scitranslmed.3000278","title":"A Role for <i>VAV1</i> in Experimental Autoimmune Encephalomyelitis and Multiple Sclerosis","year":2009,"lang":"en","type":"article","venue":"Science Translational Medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Experimental autoimmune encephalomyelitis; Multiple sclerosis; Proinflammatory cytokine; Medicine; Immunology; Encephalomyelitis; Autoimmune disease; Autoimmunity; Neuroscience; Immune system; Biology; Inflammation","score_opus":0.02699374157337581,"score_gpt":0.2807830907442775,"score_spread":0.2537893491709017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2170580103","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9814108,0.012913078,0.0013505489,0.0009965533,0.00005600907,0.000011108177,0.00016955427,0.00006412525,0.0030281337],"genre_scores_gemma":[0.9967452,0.001432429,0.00067739206,0.00016203242,0.000053213396,0.0000129709715,0.00018480857,0.0000102140775,0.0007216862],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99961793,0.00017301636,0.00001864831,0.00008565135,0.000058518537,0.000046304114],"domain_scores_gemma":[0.9993864,0.00016944985,0.00023880905,0.00006305287,0.000039016457,0.000103274484],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053312187,0.00045961293,0.00024993595,0.00068589783,0.00020033793,0.00036378094,0.00031253565,0.0003940845,0.0019566817],"category_scores_gemma":[0.0008000077,0.0001035844,0.00021182315,0.00025028887,0.00047569556,0.00016821784,0.00031887388,0.00039979958,0.000214053],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008033614,0.00053901935,0.15704614,0.00050833204,0.00039374395,0.0014338321,0.00019442357,0.00053260935,0.7461705,0.0052847257,0.002659146,0.07720377],"study_design_scores_gemma":[0.00048081114,0.0032869573,0.857229,0.00039128383,0.00040732618,0.013084617,0.00020220879,0.0025939064,0.105513155,0.0058591017,0.010913388,0.000038239967],"about_ca_topic_score_codex":0.0003614133,"about_ca_topic_score_gemma":0.00022411614,"teacher_disagreement_score":0.0019566817,"about_ca_system_score_codex":0.00028594563,"about_ca_system_score_gemma":0.00014079016,"threshold_uncertainty_score":0.0065457225},"labels":[],"label_agreement":null},{"id":"W2170585408","doi":"10.1128/jvi.80.1.226-235.2006","title":"Identification of a Novel Pathway Essential for the Immediate-Early, Interferon-Independent Antiviral Response to Enveloped Virions","year":2005,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Biology; Interferon; Viral envelope; Virology; Identification (biology); Viral replication; Virus","score_opus":0.013967468636410803,"score_gpt":0.27949323261315845,"score_spread":0.26552576397674765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2170585408","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9834231,0.00337296,0.0094111515,0.00020534836,0.000057128833,0.000102434904,0.00076877966,0.00015068131,0.0025084377],"genre_scores_gemma":[0.9858832,0.0018467942,0.006678896,0.0001010027,0.00003458386,0.0000913638,0.0020648222,0.000027265307,0.00327206],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992335,0.00000996296,0.0000064315154,0.000016245893,0.000021213913,0.0000227708],"domain_scores_gemma":[0.99991393,0.00001378674,0.000016794365,0.000010697967,0.000011975318,0.000032881897],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012550913,0.0003834734,0.0003308336,0.00021787033,0.00021903694,0.0004273313,0.00019911212,0.0003092669,0.0010696194],"category_scores_gemma":[0.00012293782,0.00014442118,0.00032207582,0.000116511656,0.000168879,0.00034594446,0.00018991923,0.00055902125,0.00055018114],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000114623566,0.000019371675,0.0001487236,0.000031073683,0.000001968153,0.00009504667,0.0000039204415,0.00003152473,0.99858034,0.00015492174,0.000014309832,0.0008041172],"study_design_scores_gemma":[0.000070505674,0.00034669047,0.019179914,0.000016586811,0.000024980693,0.0018473263,0.000036774996,0.00325323,0.9691751,0.00065373344,0.0053848545,0.000010333665],"about_ca_topic_score_codex":0.00018519962,"about_ca_topic_score_gemma":0.000260309,"teacher_disagreement_score":0.0010696194,"about_ca_system_score_codex":0.00039140508,"about_ca_system_score_gemma":0.00036766348,"threshold_uncertainty_score":0.003578186},"labels":[],"label_agreement":null},{"id":"W2172279987","doi":"10.1128/jvi.01258-12","title":"Serum- and Glucocorticoid-Regulated Kinase 1 Is Required for Nuclear Export of the Ribonucleoprotein of Influenza A Virus","year":2013,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; U.S. Public Health Service; National Institutes of Health; Icahn School of Medicine at Mount Sinai","keywords":"SGK1; Biology; Ribonucleoprotein; Nuclear export signal; Virology; Viral replication; Small interfering RNA; Virus; Influenza A virus; Heterogeneous nuclear ribonucleoprotein; Nuclear transport; Kinase; Viral Interference; Orthomyxoviridae; Cell biology; RNA; Cell nucleus; Gene; Genetics; Nucleus","score_opus":0.013291773661911949,"score_gpt":0.24344799514885357,"score_spread":0.23015622148694162,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2172279987","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947359,0.0020309885,0.001700153,0.00013880122,0.000032104257,0.000010949686,0.00047082032,0.00009210907,0.0007881268],"genre_scores_gemma":[0.9962847,0.0005422908,0.001466223,0.000044960958,0.000008423617,0.000010827749,0.0007745129,0.000026057984,0.00084194896],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998704,0.000022105933,0.000018243893,0.00002597482,0.000035670175,0.000027607022],"domain_scores_gemma":[0.99979275,0.00004559712,0.000066701985,0.00002382887,0.000019920573,0.000051147555],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012736434,0.00025715376,0.00031469346,0.00019599345,0.00024138809,0.00036639444,0.00016031894,0.00021641112,0.0008851328],"category_scores_gemma":[0.00024025611,0.00016079354,0.00025989412,0.00011365421,0.00023333801,0.00017293757,0.00016773524,0.0003518939,0.0005078868],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006967501,0.0000059949475,0.00027032095,0.000015996271,0.0000024769236,0.00004399514,0.000005592032,0.000038999246,0.998919,0.00003161519,0.00003102393,0.0005653111],"study_design_scores_gemma":[0.000019530955,0.00011997386,0.023182146,0.000006817919,0.000017723236,0.0005143209,0.0000344648,0.0017547302,0.9723531,0.00008576435,0.0019020633,0.000009417561],"about_ca_topic_score_codex":0.0010401569,"about_ca_topic_score_gemma":0.0021091036,"teacher_disagreement_score":0.0010401569,"about_ca_system_score_codex":0.0004987044,"about_ca_system_score_gemma":0.00034759357,"threshold_uncertainty_score":0.0036183},"labels":[],"label_agreement":null},{"id":"W2172736179","doi":"10.4141/cjas-2015-009","title":"Molecular cloning and characterization of porcine interferon-induced protein with tetratricopeptide repeats (IFIT) 5","year":2015,"lang":"en","type":"article","venue":"Canadian Journal of Animal Science","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Natural Science Foundation of China","keywords":"Tetratricopeptide; Biology; Molecular biology; Interferon; Gene; Open reading frame; Genetics; Peptide sequence","score_opus":0.018327838509463217,"score_gpt":0.23314693253567448,"score_spread":0.21481909402621127,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2172736179","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.939427,0.00647944,0.041529294,0.00064864696,0.0003597307,0.0004946531,0.0069124936,0.00015478283,0.0039939885],"genre_scores_gemma":[0.83402526,0.0049048513,0.08622594,0.000596489,0.00018058805,0.00043251467,0.061726533,0.00014265678,0.0117651615],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998173,0.000023411043,0.000026040529,0.00005273416,0.000044544722,0.00003604178],"domain_scores_gemma":[0.99981135,0.000044687804,0.00004709025,0.000018751458,0.00003328141,0.000044844655],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023814039,0.0005477476,0.00055797497,0.0005302009,0.00025504045,0.00033248126,0.00038504234,0.0005847628,0.0015428718],"category_scores_gemma":[0.0002757154,0.00021321034,0.0012036006,0.00050731056,0.00024027993,0.00029548455,0.00026952155,0.0007709225,0.0013310816],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015325547,0.00004191179,0.0004234164,0.00010221837,0.000012423269,0.00025422056,0.000029852592,0.00011954323,0.9957436,0.00018045805,0.00012399344,0.0028151316],"study_design_scores_gemma":[0.00022399712,0.0018838523,0.048549164,0.00013874091,0.0002605519,0.0041901288,0.00026588296,0.0068033296,0.89448136,0.00038569074,0.042731896,0.000085273154],"about_ca_topic_score_codex":0.00054368284,"about_ca_topic_score_gemma":0.00054402987,"teacher_disagreement_score":0.0015428718,"about_ca_system_score_codex":0.00041222596,"about_ca_system_score_gemma":0.00031250555,"threshold_uncertainty_score":0.0051614046},"labels":[],"label_agreement":null},{"id":"W2174729763","doi":"10.1089/107999002753452656","title":"Review: Overlapping and Distinct Mechanisms Regulating IRF-3 and IRF-7 Function","year":2002,"lang":"en","type":"review","venue":"Journal of Interferon & Cytokine Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Coactivator; IRF1; Transcription factor; Interferon regulatory factors; Biology; Gene; Function (biology); Cell biology; Regulation of gene expression; Gene expression; Genetics","score_opus":0.10717157468294444,"score_gpt":0.38613491024061075,"score_spread":0.2789633355576663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2174729763","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005878916,0.9921733,0.00063892733,0.0008006649,0.0022599455,0.000017219872,0.000071472816,0.000041201783,0.0034093496],"genre_scores_gemma":[0.002170108,0.9897718,0.0011808636,0.0007147922,0.0015082243,0.000020876441,0.000205926,0.0000064868814,0.0044209007],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998436,0.000019991834,0.000026740092,0.000034224457,0.000057598747,0.000017868564],"domain_scores_gemma":[0.99974436,0.000057853304,0.000045392822,0.0000072460116,0.00010233909,0.000042785632],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034956005,0.0012351673,0.0014538871,0.0015456583,0.00032157294,0.00095452566,0.001304703,0.0009544384,0.0046528415],"category_scores_gemma":[0.0004886823,0.00022968117,0.00027800127,0.0019264696,0.000308641,0.001489216,0.00038082965,0.0010041225,0.0066660484],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015529891,0.000054160442,0.00031222487,0.010613433,0.00007174607,0.00067382195,0.00007623038,0.00020030969,0.0078094346,0.0016616402,0.0954522,0.88291955],"study_design_scores_gemma":[0.000018263945,0.000061530394,0.0012122105,0.0009869395,0.00007390615,0.0034025214,0.000061169,0.00005361656,0.0011322042,0.0010236878,0.99195874,0.000015306096],"about_ca_topic_score_codex":0.00053440675,"about_ca_topic_score_gemma":0.0008480468,"teacher_disagreement_score":0.0046528415,"about_ca_system_score_codex":0.00053941563,"about_ca_system_score_gemma":0.0007886242,"threshold_uncertainty_score":0.015565276},"labels":[],"label_agreement":null},{"id":"W2176052250","doi":"10.1371/journal.pone.0138529","title":"SseK3 Is a Salmonella Effector That Binds TRIM32 and Modulates the Host’s NF-κB Signalling Activity","year":2015,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Health and Medical Research Council; Medical Research Council; Australian Cancer Research Foundation","keywords":"Effector; Immunoprecipitation; Salmonella; Type three secretion system; Cell biology; Ubiquitin ligase; Death domain; Biology; Ubiquitin; Secretion; Chemistry; Biochemistry; Apoptosis; Genetics; Gene; Bacteria; Programmed cell death; Mutant","score_opus":0.07815522925314403,"score_gpt":0.24265850405544456,"score_spread":0.16450327480230054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2176052250","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99430025,0.0015738797,0.0023774386,0.00008987268,0.000019521094,0.000015000852,0.00036692433,0.00007468456,0.0011824762],"genre_scores_gemma":[0.99531144,0.0004383335,0.0012793653,0.000058611633,0.00000559542,0.000010426827,0.00078965223,0.000010541791,0.0020961259],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990594,0.000011238742,0.000008686417,0.000023246765,0.00002514723,0.000025722695],"domain_scores_gemma":[0.9999471,0.0000048683837,0.00001686638,0.0000052424402,0.000008440992,0.000017585558],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000095687894,0.0002756029,0.00018959733,0.00014350828,0.00020146658,0.00027228205,0.00016356839,0.00035082985,0.0017100435],"category_scores_gemma":[0.000089776884,0.00009341331,0.000398961,0.00013032154,0.00012200532,0.00021283946,0.00027868833,0.00038296744,0.00067503593],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000118826356,0.000012472464,0.00056756043,0.00004076865,0.0000064443884,0.000105350846,0.0000118290145,0.000050353847,0.9980757,0.00007168699,0.000049933264,0.0008890903],"study_design_scores_gemma":[0.000023590836,0.00017345005,0.019954478,0.000012836297,0.000023770353,0.0012126882,0.00006626608,0.002062308,0.97138333,0.0001058727,0.004971226,0.000010248315],"about_ca_topic_score_codex":0.00035669137,"about_ca_topic_score_gemma":0.00046325664,"teacher_disagreement_score":0.0017100435,"about_ca_system_score_codex":0.0003774263,"about_ca_system_score_gemma":0.00014343961,"threshold_uncertainty_score":0.0057207346},"labels":[],"label_agreement":null},{"id":"W2190822649","doi":"10.4049/jimmunol.1501028","title":"Class A Scavenger Receptor–Mediated Double-Stranded RNA Internalization Is Independent of Innate Antiviral Signaling and Does Not Require Phosphatidylinositol 3-Kinase Activity","year":2015,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"TRIF; Innate immune system; Biology; TLR3; Cell biology; Internalization; Signal transduction; RIG-I; RNA silencing; PI3K/AKT/mTOR pathway; Receptor; Toll-like receptor; RNA interference; RNA; Biochemistry","score_opus":0.02272337994472705,"score_gpt":0.2640042257949625,"score_spread":0.24128084585023546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2190822649","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98788446,0.0011286953,0.0074318666,0.00010686976,0.000028855013,0.000057532012,0.00031263795,0.00012394023,0.0029251194],"genre_scores_gemma":[0.99150074,0.0005590533,0.0034119014,0.000041907173,0.000010990301,0.00005544951,0.0009006101,0.000026032865,0.0034933402],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997167,0.00003823637,0.00003161516,0.000057287252,0.00009714243,0.000058987942],"domain_scores_gemma":[0.9997981,0.000024272882,0.0000679706,0.00005645089,0.000030580093,0.000022656033],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002080832,0.00024001068,0.00024204816,0.00017651373,0.00014429963,0.000397945,0.00022174217,0.00026795504,0.0010568519],"category_scores_gemma":[0.00014250888,0.00014780379,0.00045317947,0.000101236066,0.00030285327,0.0002443071,0.00025043497,0.0004825309,0.0006862447],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047124,0.00001624716,0.00021546613,0.000022818207,0.0000043442624,0.000048756618,0.000008973681,0.00001482951,0.9987871,0.000120741475,0.000016453358,0.0006971559],"study_design_scores_gemma":[0.00002284029,0.00022398829,0.0061550513,0.000008369228,0.000015743764,0.0006052658,0.000037132755,0.0010299153,0.9885972,0.00009666231,0.0032012619,0.0000064649876],"about_ca_topic_score_codex":0.00044904032,"about_ca_topic_score_gemma":0.0005116779,"teacher_disagreement_score":0.0010568519,"about_ca_system_score_codex":0.0002719051,"about_ca_system_score_gemma":0.00034058985,"threshold_uncertainty_score":0.003535509},"labels":[],"label_agreement":null},{"id":"W2191790139","doi":"10.1016/j.cell.2015.11.045","title":"Limiting Cholesterol Biosynthetic Flux Spontaneously Engages Type I IFN Signaling","year":2015,"lang":"en","type":"article","venue":"Cell","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":445,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; University Health Network","funders":"National Center for Advancing Translational Sciences; National Institute of Dental and Craniofacial Research; National Institute of Allergy and Infectious Diseases; National Center for Research Resources; National Institute of General Medical Sciences; National Cancer Institute; National Heart, Lung, and Blood Institute","keywords":"Biology; Flux (metallurgy); Cholesterol; Downregulation and upregulation; Biosynthesis; Reprogramming; Cell biology; Innate immune system; Metabolic pathway; Signal transduction; Biochemistry; Cholesterol synthesis; Limiting; Reverse cholesterol transport; Metabolism; Cell; Lipoprotein; Enzyme; Gene; Chemistry","score_opus":0.0311323856374542,"score_gpt":0.2438397605830486,"score_spread":0.21270737494559439,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2191790139","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97936934,0.00097191543,0.013491458,0.00064946397,0.00020017197,0.000042226715,0.00025522034,0.00035252515,0.004667544],"genre_scores_gemma":[0.9955918,0.00025487677,0.0023381975,0.00012864599,0.00002681925,0.000024410543,0.00009368634,0.00004927135,0.0014923688],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997061,0.000050217102,0.000016491538,0.00005400085,0.00007785472,0.00009534649],"domain_scores_gemma":[0.99968064,0.00010440416,0.00005624785,0.00007109872,0.000030038242,0.000057576122],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043302204,0.0003425603,0.00036552086,0.00023779846,0.00023037994,0.00082400185,0.00027277286,0.0004249563,0.0015010708],"category_scores_gemma":[0.00051720836,0.00016396392,0.00023286906,0.00017518309,0.00037060116,0.0004683917,0.0005786573,0.0008837096,0.0005525782],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021077918,0.000026939239,0.00038415386,0.000024324487,0.000005045068,0.000058631882,0.00001909453,0.00011552224,0.9952642,0.0015216687,0.00012892588,0.002240693],"study_design_scores_gemma":[0.000015139901,0.000051020914,0.0003651595,0.0000042990823,0.0000051195816,0.000052421514,0.00002795057,0.0013655103,0.9955716,0.00081639335,0.0017202466,0.0000050851063],"about_ca_topic_score_codex":0.00021300491,"about_ca_topic_score_gemma":0.0004310669,"teacher_disagreement_score":0.0015010708,"about_ca_system_score_codex":0.00053508696,"about_ca_system_score_gemma":0.00031442568,"threshold_uncertainty_score":0.0050216317},"labels":[],"label_agreement":null},{"id":"W2210253930","doi":"10.1126/scisignal.aaa8695","title":"SOCS3 in retinal neurons and glial cells suppresses VEGF signaling to prevent pathological neovascular growth","year":2015,"lang":"en","type":"article","venue":"Science Signaling","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine","funders":"National Eye Institute; Fonds de Recherche du Québec - Santé; Deutsche Forschungsgemeinschaft; Deutsche Ophthalmologische Gesellschaft; Alcon Research Institute; BrightFocus Foundation; Foundation Fighting Blindness; Canadian Child Health Clinician Scientist Program; Seventh Framework Programme; Eunice Kennedy Shriver National Institute of Child Health and Human Development; Boston Children's Hospital; Burroughs Wellcome Fund","keywords":"Retina; Retinal; Cell biology; SOCS3; Signal transduction; Pathological; Biology; Vascular endothelial growth factor; Angiogenesis; Cancer research; Macular degeneration; Muller glia; Neuroscience; VEGF receptors; Pathology; Progenitor cell; Medicine; STAT3; Stem cell; Ophthalmology; Biochemistry","score_opus":0.022697167402431693,"score_gpt":0.2623236105582277,"score_spread":0.23962644315579604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2210253930","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98782325,0.0038600217,0.004578481,0.0003611331,0.00018488221,0.00004327402,0.0006033425,0.00026401476,0.0022815727],"genre_scores_gemma":[0.9960269,0.0007764047,0.001280973,0.00016530798,0.000017657265,0.00004164926,0.0002688967,0.000020624113,0.0014015338],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997571,0.00003293574,0.000030779862,0.000035190216,0.000058262827,0.00008573388],"domain_scores_gemma":[0.9998659,0.000009633719,0.000046278117,0.00001571268,0.000020915275,0.000041607727],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019706922,0.00038794757,0.0003031826,0.00023544811,0.00017742172,0.00028371453,0.00016714245,0.0002904041,0.0010909006],"category_scores_gemma":[0.00013776663,0.00012560253,0.0003600142,0.00012328649,0.0004115826,0.0001732743,0.00019652357,0.00067619333,0.00025896163],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019742645,0.000026909478,0.00024826525,0.000088926165,0.000010531674,0.000033160137,0.000015332529,0.000098079116,0.9966043,0.00024894308,0.0001571038,0.0022709954],"study_design_scores_gemma":[0.0001250348,0.00075870357,0.007878166,0.000025972813,0.00006103731,0.00039389636,0.00008464887,0.0023785424,0.981128,0.00024898673,0.0069031524,0.000013917992],"about_ca_topic_score_codex":0.0012658522,"about_ca_topic_score_gemma":0.0024883007,"teacher_disagreement_score":0.0012658522,"about_ca_system_score_codex":0.0004545015,"about_ca_system_score_gemma":0.0006054943,"threshold_uncertainty_score":0.0036494732},"labels":[],"label_agreement":null},{"id":"W2211243458","doi":"10.1128/jvi.02642-15","title":"Membrane Perturbation-Associated Ca <sup>2+</sup> Signaling and Incoming Genome Sensing Are Required for the Host Response to Low-Level Enveloped Virus Particle Entry","year":2015,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Biology; IRF3; Sendai virus; Virus; Viral entry; Cell biology; Interferon; Virology; Viral envelope; Viral replication; Signal transduction; DNA virus; Innate immune system; Receptor; Genetics; Gene; Genome","score_opus":0.03736186760188368,"score_gpt":0.2667205993448285,"score_spread":0.22935873174294483,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2211243458","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99323106,0.0021110706,0.0023546761,0.00022457168,0.00004019381,0.000034033896,0.0005070656,0.00009850579,0.0013988598],"genre_scores_gemma":[0.99654144,0.000305939,0.0015549752,0.00006676885,0.000017387738,0.000043536493,0.00056497793,0.000013758282,0.0008911572],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99973863,0.000026259702,0.000029480881,0.000060816677,0.00006679526,0.00007805226],"domain_scores_gemma":[0.9997123,0.00005030618,0.00010926083,0.000034491182,0.000035876583,0.00005775503],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015757563,0.00039841566,0.00041908005,0.00012982677,0.00023474741,0.0006188762,0.00029653442,0.0005706914,0.0018914335],"category_scores_gemma":[0.00027299428,0.00017048563,0.00027826245,0.00011338478,0.00040109197,0.00039223616,0.0003097644,0.0005701358,0.00068639347],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022240453,0.000016358226,0.00041546812,0.000034003722,0.000002455107,0.000054211396,0.0000061662317,0.000047579942,0.9986249,0.000054456905,0.000021682417,0.0005003262],"study_design_scores_gemma":[0.00004056804,0.00024284296,0.029341051,0.000011626895,0.000012905135,0.00058472564,0.00007114577,0.0016411765,0.9661175,0.00015929354,0.0017688671,0.000008381034],"about_ca_topic_score_codex":0.00057482155,"about_ca_topic_score_gemma":0.00071960327,"teacher_disagreement_score":0.0018914335,"about_ca_system_score_codex":0.00063531933,"about_ca_system_score_gemma":0.00041983137,"threshold_uncertainty_score":0.0063274503},"labels":[],"label_agreement":null},{"id":"W22149989","doi":"10.1111/j.1399-0004.2011.01825.x","title":"关于“整数应用”问题中的三类典型例题分析","year":2004,"lang":"en","type":"article","venue":"中学数学杂志：初中版","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Computer science","score_opus":0.008752779228730901,"score_gpt":0.23040674549176535,"score_spread":0.22165396626303444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W22149989","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8896323,0.04815505,0.00891635,0.0058015697,0.0010658221,0.00007244359,0.0002164976,0.00021726785,0.045922764],"genre_scores_gemma":[0.96581817,0.008661113,0.0057651065,0.00084202515,0.0002661696,0.000023293245,0.00017932606,0.000008846558,0.018435882],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999362,0.000016718419,0.000004551297,0.000012774742,0.000012412799,0.00001732322],"domain_scores_gemma":[0.99994314,0.000013312155,0.000017407468,0.000004513735,0.000010452028,0.000011092383],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013025793,0.00021050498,0.00012550877,0.00020491524,0.0002204743,0.00021978254,0.00012672205,0.0005169853,0.0026535946],"category_scores_gemma":[0.0001911949,0.00004260316,0.00011435812,0.00015789148,0.0005513264,0.000171142,0.00012646674,0.00034259574,0.0005479864],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002082212,0.00021871875,0.047711354,0.00084622425,0.000089875495,0.021031039,0.00073540176,0.0005955124,0.6061011,0.02270144,0.008955393,0.28893176],"study_design_scores_gemma":[0.00011478816,0.0015467206,0.16825363,0.0003128588,0.00018009973,0.1194888,0.0012538914,0.0027133124,0.3640022,0.026901394,0.31516173,0.000070578324],"about_ca_topic_score_codex":0.0005880048,"about_ca_topic_score_gemma":0.0009833477,"teacher_disagreement_score":0.0026535946,"about_ca_system_score_codex":0.00035525332,"about_ca_system_score_gemma":0.00016807675,"threshold_uncertainty_score":0.008877158},"labels":[],"label_agreement":null},{"id":"W2245092729","doi":"10.82308/25940","title":"Defining the role of different KRAS effectors in the initiation and progression of lung cancer","year":2013,"lang":"en","type":"article","venue":"eScholarship@McGill (McGill)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institutes of Health","keywords":"KRAS; MAPK/ERK pathway; PI3K/AKT/mTOR pathway; Cancer research; MEK inhibitor; Biology; Effector; Cancer; Lung cancer; Mutant; Carcinogenesis; Signal transduction; Medicine; Cell biology; Genetics; Oncology; Gene; Colorectal cancer","score_opus":0.006432952945936332,"score_gpt":0.2440490044041442,"score_spread":0.23761605145820788,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2245092729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9490226,0.037552994,0.005443812,0.0010196873,0.000079783196,0.00011694524,0.0002937206,0.00007782748,0.0063926405],"genre_scores_gemma":[0.9713633,0.020548461,0.0052488563,0.00035737705,0.000040844952,0.000048731075,0.0003111283,0.000019065135,0.0020622006],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997727,0.0000321394,0.000024062667,0.00003507778,0.00007693513,0.00005897066],"domain_scores_gemma":[0.99984753,0.00003330408,0.000037661528,0.000015062448,0.000026691532,0.000039734176],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051586155,0.0002831422,0.00024061877,0.00049651467,0.00019569484,0.0009242459,0.00044186204,0.0005174823,0.0006566575],"category_scores_gemma":[0.00024395471,0.00024509217,0.0003604402,0.00025056154,0.00044558506,0.0006789018,0.00037966567,0.00091158604,0.00028712332],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010345217,0.00024240385,0.008728296,0.00031331956,0.000030723902,0.00039707814,0.000112877264,0.0011262059,0.951008,0.0044950503,0.00026559937,0.03224584],"study_design_scores_gemma":[0.000094568626,0.0020704647,0.049051177,0.00011265465,0.00012045288,0.0027339614,0.00047514314,0.004694298,0.9018452,0.0019198277,0.036833834,0.0000484262],"about_ca_topic_score_codex":0.000907404,"about_ca_topic_score_gemma":0.0014327638,"teacher_disagreement_score":0.0009242459,"about_ca_system_score_codex":0.0006039735,"about_ca_system_score_gemma":0.00049477746,"threshold_uncertainty_score":0.0043821335},"labels":[],"label_agreement":null},{"id":"W2252997710","doi":"10.1371/journal.ppat.1005428","title":"The Hepatitis C Virus-Induced Membranous Web and Associated Nuclear Transport Machinery Limit Access of Pattern Recognition Receptors to Viral Replication Sites","year":2016,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":105,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Biology; Viral replication; Virology; Innate immune system; Pattern recognition receptor; Virus; Viral entry; Hepatitis C virus; RNA; Cell biology; Nuclear transport; Nuclear export signal; RIG-I; MDA5; Cytoplasm; Immune system; Cell nucleus; Genetics; Gene; RNA interference","score_opus":0.02847802085745701,"score_gpt":0.24739675695621874,"score_spread":0.21891873609876172,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2252997710","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9624651,0.00878318,0.022373114,0.00034633986,0.000068937145,0.000057724188,0.00044900907,0.000489426,0.004967213],"genre_scores_gemma":[0.9916944,0.0011801237,0.0038427855,0.00007489292,0.000011555329,0.000025135007,0.0003942594,0.000041824555,0.0027349587],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997228,0.00004495981,0.000023820068,0.000057268866,0.00008211393,0.00006905849],"domain_scores_gemma":[0.99971944,0.000034173703,0.00009398661,0.00005669359,0.00004095127,0.00005464068],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021228594,0.00031812207,0.00030274675,0.0002534817,0.0002997678,0.0008182384,0.0002997712,0.0003809551,0.0013697976],"category_scores_gemma":[0.00023849895,0.0001955251,0.0004933402,0.00013831619,0.00041979153,0.0006089322,0.00071532547,0.00057670433,0.001046139],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007837061,0.00000895277,0.00027415538,0.00004249128,0.0000037027796,0.000036231933,0.000013299107,0.000042989614,0.99782336,0.00039971643,0.00002889943,0.0012477697],"study_design_scores_gemma":[0.000025566078,0.00020420381,0.014661768,0.000027369657,0.000017473632,0.000502229,0.00006808264,0.0026307227,0.97574514,0.00040118897,0.00569874,0.000017528293],"about_ca_topic_score_codex":0.0005731013,"about_ca_topic_score_gemma":0.00076993904,"teacher_disagreement_score":0.0013697976,"about_ca_system_score_codex":0.0007223843,"about_ca_system_score_gemma":0.00045183385,"threshold_uncertainty_score":0.005241275},"labels":[],"label_agreement":null},{"id":"W2259139274","doi":"10.1016/j.cell.2015.12.032","title":"Parsing the Interferon Transcriptional Network and Its Disease Associations","year":2016,"lang":"en","type":"article","venue":"Cell","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":348,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Cancer Institute","keywords":"Biology; Parsing; Interferon; Disease; Genetics; Computational biology; Artificial intelligence","score_opus":0.01651755858775249,"score_gpt":0.22575215987566924,"score_spread":0.20923460128791674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2259139274","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.60437024,0.012605087,0.34550095,0.007422021,0.0003217303,0.00008103787,0.007035491,0.0011059549,0.021557584],"genre_scores_gemma":[0.955556,0.0021806438,0.036197428,0.0005663897,0.00016926948,0.000054817458,0.0025046892,0.0001607574,0.0026100532],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"observational","domain_scores_codex":[0.9992637,0.00032533865,0.000028938359,0.00020614883,0.00008765194,0.000088193614],"domain_scores_gemma":[0.9978459,0.0013856953,0.00024135286,0.0002655613,0.00016118448,0.00010037],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001346161,0.0004183803,0.00064007414,0.0014887927,0.0005856097,0.0026666895,0.00068077527,0.00076049194,0.0031779022],"category_scores_gemma":[0.0040959497,0.00038959552,0.0005477554,0.0016898521,0.0010209774,0.0031823895,0.001387164,0.0013418889,0.0007630632],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018238868,0.00031018833,0.12340215,0.0007043025,0.00030478244,0.0008423656,0.0011389187,0.049149126,0.12631714,0.41900322,0.0111827105,0.26582122],"study_design_scores_gemma":[0.00003759712,0.00007448832,0.031506028,0.0001399432,0.00014192497,0.00037965702,0.0007454678,0.12942193,0.01734958,0.7953068,0.024835749,0.00006087212],"about_ca_topic_score_codex":0.0011678042,"about_ca_topic_score_gemma":0.0019891625,"teacher_disagreement_score":0.0031779022,"about_ca_system_score_codex":0.00072380493,"about_ca_system_score_gemma":0.00062870345,"threshold_uncertainty_score":0.010631144},"labels":[],"label_agreement":null},{"id":"W2263179825","doi":"10.32657/10356/49502","title":"Studies on the host-virus interactions of coronaviruses","year":2012,"lang":"en","type":"dissertation","venue":"","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Foreign Affairs and International Trade Canada; Directorate for Biological Sciences; Institute of Molecular and Cell Biology; Nanyang Technological University; University of Alberta","keywords":"Virus; Virology; Apoptosis; Host (biology); Biology; Cell biology; Coronavirus; Dual (grammatical number); Coronavirus disease 2019 (COVID-19); Genetics; Medicine; Philosophy; Disease","score_opus":0.06789145151440479,"score_gpt":0.3589908129900033,"score_spread":0.2910993614755985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2263179825","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8899055,0.08564401,0.0044950973,0.00051417324,0.0002122304,0.0000584161,0.00021747973,0.000026191752,0.018926881],"genre_scores_gemma":[0.94378334,0.043968298,0.002224384,0.00017738191,0.00016616026,0.000036615966,0.00046748226,0.000016131251,0.009160154],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998311,0.0000461347,0.000006857115,0.000018492541,0.000042310396,0.00005507664],"domain_scores_gemma":[0.99987805,0.000055148503,0.000014943635,0.00001058511,0.000023505288,0.000017800856],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000439966,0.000137899,0.0001732624,0.00028624377,0.0002799346,0.00040048335,0.00016861335,0.00027326093,0.0015088265],"category_scores_gemma":[0.00026457867,0.000079905614,0.00024714496,0.00021966563,0.00024183201,0.00036206262,0.00026438403,0.000510543,0.00044537376],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002143815,0.000044627646,0.0015718621,0.00025448287,0.000015892745,0.00027207728,0.00022023825,0.00017703968,0.97772104,0.0025064552,0.00027129453,0.016730767],"study_design_scores_gemma":[0.000023440323,0.0011753535,0.040979702,0.00013133083,0.000050771272,0.0013755284,0.0006231041,0.0006563218,0.8904097,0.0022352254,0.062318217,0.000021256734],"about_ca_topic_score_codex":0.0004892731,"about_ca_topic_score_gemma":0.0005777414,"teacher_disagreement_score":0.0015088265,"about_ca_system_score_codex":0.00045793623,"about_ca_system_score_gemma":0.00016779012,"threshold_uncertainty_score":0.0050475597},"labels":[],"label_agreement":null},{"id":"W2264810876","doi":"10.1053/j.gastro.2016.01.031","title":"Variants in TRIM22 That Affect NOD2 Signaling Are Associated With Very-Early-Onset Inflammatory Bowel Disease","year":2016,"lang":"en","type":"article","venue":"Gastroenterology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":110,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine; SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; National Human Genome Research Institute","keywords":"NOD2; Inflammatory bowel disease; Exome sequencing; Exome; Medicine; Immunology; Crohn's disease; Disease; Compound heterozygosity; Phenotype; Biology; Gene; Genetics; Internal medicine","score_opus":0.009999314687661173,"score_gpt":0.21269231116140067,"score_spread":0.2026929964737395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2264810876","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950918,0.0009624076,0.0016417602,0.00030980358,0.00012857708,0.000027239257,0.00045545236,0.00007157874,0.0013114319],"genre_scores_gemma":[0.9980565,0.00012356795,0.0007010022,0.00015201251,0.0000752805,0.000008748407,0.00022576388,0.00002814347,0.0006290548],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993463,0.00021778549,0.00010005362,0.00014693626,0.000089236506,0.00009969739],"domain_scores_gemma":[0.99850583,0.00039568174,0.00063729053,0.00008543441,0.00008396032,0.00029182655],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046255506,0.0016031242,0.0006315681,0.0009716937,0.00068077527,0.00062113436,0.00075586827,0.0017170479,0.00485774],"category_scores_gemma":[0.0016167976,0.00031106954,0.0009295953,0.0008601791,0.0006622331,0.00037031792,0.00063444406,0.000978653,0.0006726656],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013565774,0.0008653807,0.396269,0.0006643595,0.0025079602,0.1499859,0.0011079329,0.0017890912,0.39799547,0.0028054544,0.004126977,0.028316675],"study_design_scores_gemma":[0.00043633542,0.0013350629,0.81040835,0.00029291926,0.0012913885,0.1566847,0.00070410455,0.0031631675,0.017849376,0.002136556,0.005540251,0.0001578549],"about_ca_topic_score_codex":0.0009555161,"about_ca_topic_score_gemma":0.0010316933,"teacher_disagreement_score":0.00485774,"about_ca_system_score_codex":0.0002074554,"about_ca_system_score_gemma":0.00015572822,"threshold_uncertainty_score":0.01625079},"labels":[],"label_agreement":null},{"id":"W2267715084","doi":"10.1165/rcmb.2015-0306oc","title":"Impaired Antiviral Stress Granule and IFN-β Enhanceosome Formation Enhances Susceptibility to Influenza Infection in Chronic Obstructive Pulmonary Disease Epithelium","year":2016,"lang":"en","type":"article","venue":"American Journal of Respiratory Cell and Molecular Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Immunology; COPD; Protein kinase R; Interferon; Viral replication; Virus; Biology; Medicine; Kinase; Protein kinase A; Internal medicine; Cell biology; Mitogen-activated protein kinase kinase","score_opus":0.00633888479978409,"score_gpt":0.2556723372174334,"score_spread":0.2493334524176493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2267715084","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975483,0.0009406052,0.00079911115,0.00005421382,0.000014997972,0.00001368068,0.00011982844,0.00002155313,0.00048763858],"genre_scores_gemma":[0.99802494,0.000356624,0.00043612844,0.000025322706,0.0000043946347,0.000013692832,0.00019670845,0.0000056003205,0.00093657407],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998636,0.000022215254,0.000014371248,0.000023873095,0.00004103697,0.000034881676],"domain_scores_gemma":[0.99990916,0.000010177025,0.000019545729,0.000011960697,0.000015762786,0.000033380762],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013003417,0.00018649604,0.00031843642,0.00018646369,0.000159429,0.00029644906,0.00009908874,0.00028305664,0.0010866221],"category_scores_gemma":[0.00010542264,0.00016661861,0.0002971106,0.00008663767,0.0001805036,0.00019981332,0.000256066,0.0006196461,0.00034284816],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011325735,0.000015711028,0.00053824234,0.000016102773,0.000002629069,0.00003687442,0.00001016724,0.0000054607535,0.99889636,0.000011990726,0.0000100547495,0.00034315125],"study_design_scores_gemma":[0.000020023024,0.00046568978,0.094672434,0.000009778155,0.000026830177,0.0007479304,0.00011822054,0.0007020081,0.901881,0.000054517368,0.0012956607,0.000005811748],"about_ca_topic_score_codex":0.0004016483,"about_ca_topic_score_gemma":0.00043546368,"teacher_disagreement_score":0.0010866221,"about_ca_system_score_codex":0.00017487434,"about_ca_system_score_gemma":0.00013232557,"threshold_uncertainty_score":0.0036351085},"labels":[],"label_agreement":null},{"id":"W2268301683","doi":"10.1128/mcb.00344-15","title":"Fine-Tuning of the RIG-I-Like Receptor/Interferon Regulatory Factor 3-Dependent Antiviral Innate Immune Response by the Glycogen Synthase Kinase 3/β-Catenin Pathway","year":2015,"lang":"en","type":"article","venue":"Molecular and Cellular Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute; Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"IRF3; Biology; GSK-3; Innate immune system; RIG-I; Interferon regulatory factors; Interferon; Cell biology; Pattern recognition receptor; Transcription factor; MDA5; Phosphorylation; Molecular biology; Immune system; Virology; Immunology; Biochemistry; Gene; RNA; RNA interference","score_opus":0.011423247114480681,"score_gpt":0.21999123429861112,"score_spread":0.20856798718413044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2268301683","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99041677,0.002292433,0.003790555,0.00017480849,0.00006500788,0.000049170772,0.0004971934,0.0001412282,0.0025727614],"genre_scores_gemma":[0.99352646,0.0012016848,0.0030697556,0.00008778565,0.000009385723,0.00004543596,0.000339297,0.000023957047,0.0016963127],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998796,0.000018351308,0.00001845887,0.00002595864,0.000028562647,0.000028943768],"domain_scores_gemma":[0.9999374,0.0000069931034,0.000023180017,0.000008946431,0.000005449944,0.000018020639],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017013014,0.00039957423,0.0002071526,0.00026942624,0.00009949018,0.00035807307,0.00019581952,0.00022418346,0.0009507001],"category_scores_gemma":[0.00009414742,0.00016832404,0.00036033386,0.00012967645,0.00027810573,0.00023900908,0.00022978018,0.00052033394,0.00032881458],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005793618,0.000006605854,0.000107133405,0.000018608882,0.0000030801893,0.000028238477,0.000004131631,0.000040617673,0.9992449,0.00007515259,0.00001210499,0.00040146627],"study_design_scores_gemma":[0.00004478012,0.000107902335,0.0037857387,0.000008742527,0.000024750741,0.00021680442,0.000022463773,0.0009814319,0.9928664,0.000082883846,0.0018518586,0.0000062685517],"about_ca_topic_score_codex":0.00027138428,"about_ca_topic_score_gemma":0.00062028546,"teacher_disagreement_score":0.0009507001,"about_ca_system_score_codex":0.00024157367,"about_ca_system_score_gemma":0.00023596025,"threshold_uncertainty_score":0.0031803846},"labels":[],"label_agreement":null},{"id":"W2270967011","doi":"10.1080/2162402x.2015.1090077","title":"Pharmacological DNA demethylation: Implications for cancer immunotherapy","year":2015,"lang":"en","type":"article","venue":"OncoImmunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Princess Margaret Cancer Centre; University Health Network","funders":"","keywords":"DNA demethylation; Stimulator of interferon genes; IRF7; Interferon; MDA5; Viral infection; TLR7; Demethylation; Downregulation and upregulation; Cancer immunotherapy; Cancer research; Biology; DNA; Immunotherapy; Cancer; Interferon regulatory factors; DNA methylation; Virology; Innate immune system; Gene; Immunology; RNA; Immune system; Virus; Genetics; Gene expression; Toll-like receptor; RNA interference","score_opus":0.07756765969573012,"score_gpt":0.37292225307251653,"score_spread":0.2953545933767864,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2270967011","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15625562,0.7552081,0.029705472,0.02366429,0.0015292481,0.00031099684,0.0004627939,0.00036171798,0.032501884],"genre_scores_gemma":[0.7034737,0.27019203,0.011981552,0.0032686493,0.0011373472,0.00027167477,0.00034819383,0.000040307194,0.0092865545],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.999913,0.00002536009,0.0000055162973,0.00001840975,0.000016866514,0.000020984351],"domain_scores_gemma":[0.9998784,0.000049356335,0.000025002795,0.000012506114,0.0000149567995,0.000019815543],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052809116,0.00034255575,0.0003778693,0.00036772678,0.0002258634,0.0006112794,0.00040408608,0.0007119603,0.0028565258],"category_scores_gemma":[0.00031250794,0.00011952629,0.00026990083,0.0002290199,0.00051311136,0.00063873286,0.00027520434,0.0014046081,0.00043706957],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011229928,0.0008471618,0.001560393,0.0017898696,0.000095669195,0.00047784534,0.00015546542,0.0024177325,0.5656398,0.023987489,0.0057835174,0.39612204],"study_design_scores_gemma":[0.00068280514,0.008671233,0.008308161,0.0007027411,0.0002637577,0.0041816137,0.0004887165,0.0055861985,0.5839048,0.038707662,0.34841225,0.00009006674],"about_ca_topic_score_codex":0.0002332459,"about_ca_topic_score_gemma":0.0005587778,"teacher_disagreement_score":0.0028565258,"about_ca_system_score_codex":0.00046590515,"about_ca_system_score_gemma":0.0003492376,"threshold_uncertainty_score":0.009555995},"labels":[],"label_agreement":null},{"id":"W2271940383","doi":"10.3791/53723","title":"A High Resolution Method to Monitor Phosphorylation-dependent Activation of IRF3","year":2016,"lang":"en","type":"article","venue":"Journal of Visualized Experiments","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"IRF3; Phosphorylation; Interferon regulatory factors; Transcription factor; Biology; Molecular biology; Cell biology; Chemistry; Virology; Gene; Biochemistry","score_opus":0.026388602237144045,"score_gpt":0.40645705958189465,"score_spread":0.3800684573447506,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2271940383","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1928243,0.012276264,0.7805208,0.00085485325,0.00047654996,0.0003238508,0.0026562514,0.0032405115,0.0068265954],"genre_scores_gemma":[0.25408173,0.010757258,0.7154244,0.0005558539,0.00023898062,0.0012038576,0.0062557394,0.00077540387,0.010706724],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994036,0.00013573711,0.000048615795,0.00018415778,0.00014744821,0.00008042449],"domain_scores_gemma":[0.99954766,0.00014710972,0.00007012823,0.000097735065,0.000083391235,0.000053823103],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064391416,0.0014459044,0.00057152973,0.0016220324,0.00068999117,0.0007132466,0.001100289,0.0011889022,0.0033524656],"category_scores_gemma":[0.00048338185,0.00066180027,0.0006801582,0.00091636914,0.00035259186,0.0007770653,0.0006313448,0.002847948,0.0030081775],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002276342,0.000021828157,0.000043562264,0.00006863568,0.000008109932,0.000028097144,0.000012196621,0.000028596196,0.9976145,0.00013240452,0.00011601457,0.0019034701],"study_design_scores_gemma":[0.0000141976525,0.00014433583,0.002308368,0.000022803662,0.000049823313,0.0009367301,0.0000344766,0.0022763815,0.98384297,0.00031288798,0.01003256,0.000024513896],"about_ca_topic_score_codex":0.00029764557,"about_ca_topic_score_gemma":0.0005667725,"teacher_disagreement_score":0.0033524656,"about_ca_system_score_codex":0.00031237272,"about_ca_system_score_gemma":0.00028134332,"threshold_uncertainty_score":0.011215091},"labels":[],"label_agreement":null},{"id":"W2281376339","doi":"10.1007/978-0-387-33012-9_84","title":"HCoV-Oc43–Induced Apoptosis of Murine Neuronal Cells","year":2006,"lang":"en","type":"article","venue":"Advances in experimental medicine and biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Armand Frappier Museum; Institut National de la Recherche Scientifique","funders":"","keywords":"Apoptosis; Biology; Cell biology; Virology; Genetics","score_opus":0.01853629155014161,"score_gpt":0.31535328428505083,"score_spread":0.29681699273490925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2281376339","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934782,0.0019462043,0.00094584265,0.000098884906,0.00009206755,0.000051481416,0.00051970326,0.000045169007,0.002822432],"genre_scores_gemma":[0.9942222,0.001195639,0.0009542975,0.00006289813,0.000022697614,0.000065645356,0.0008739281,0.000012880547,0.0025897757],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99950445,0.00007009986,0.000053659336,0.000069088004,0.00012935088,0.00017332568],"domain_scores_gemma":[0.99981254,0.000046581736,0.000027982234,0.000044380453,0.000034468598,0.00003403053],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029315642,0.00045775424,0.0005752627,0.00057476177,0.00043002056,0.00036337614,0.00029133033,0.0005295118,0.0015106321],"category_scores_gemma":[0.00015971581,0.00017842758,0.00056578295,0.0005538891,0.00029975493,0.000306253,0.00025212567,0.0011847612,0.00031926628],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005957635,0.00018028164,0.00045151231,0.00010334642,0.000032737305,0.00021911367,0.00006475968,0.00014165483,0.9946354,0.0004115542,0.00016659389,0.0029972617],"study_design_scores_gemma":[0.000037611946,0.0005552963,0.0040611164,0.000011109283,0.00002219545,0.0002429442,0.000062974395,0.0005415266,0.9924723,0.00008318029,0.0019052158,0.000004520181],"about_ca_topic_score_codex":0.003453796,"about_ca_topic_score_gemma":0.003285515,"teacher_disagreement_score":0.003453796,"about_ca_system_score_codex":0.00072924234,"about_ca_system_score_gemma":0.0006432866,"threshold_uncertainty_score":0.006867349},"labels":[],"label_agreement":null},{"id":"W2282937734","doi":"10.1128/jvi.02446-15","title":"Herpes Simplex Virus 1 (HSV-1) and HSV-2 Mediate Species-Specific Modulations of Programmed Necrosis through the Viral Ribonucleotide Reductase Large Subunit R1","year":2015,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Cancer Institute; National Key Research and Development Program of China; National Institutes of Health; National Natural Science Foundation of China","keywords":"Biology; Tumor necrosis factor alpha; Necrosis; Herpes simplex virus; Virology; Programmed cell death; Cell biology; Protein kinase R; Protein kinase A; Virus; Kinase; Apoptosis; Immunology; Biochemistry; Mitogen-activated protein kinase kinase; Genetics","score_opus":0.041773104689424995,"score_gpt":0.27934700031401843,"score_spread":0.23757389562459344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2282937734","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9804766,0.013247799,0.0032045,0.000103686325,0.00008681123,0.000049794762,0.0003288179,0.00012421493,0.0023776821],"genre_scores_gemma":[0.9932547,0.002953831,0.001826346,0.000048354665,0.000022089136,0.000029768691,0.00037170344,0.000012545015,0.0014805223],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981874,0.000044711753,0.00002284269,0.00003837742,0.000033722758,0.00004154538],"domain_scores_gemma":[0.99988616,0.000022980164,0.00004620968,0.00001595516,0.000011927503,0.000016772387],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019427594,0.00044768228,0.0001746066,0.00012713707,0.00008788181,0.000325772,0.00019138349,0.00024015055,0.0011688587],"category_scores_gemma":[0.00016256457,0.000084667285,0.00027742723,0.00009863819,0.00021971359,0.00022114824,0.00020753672,0.0003503905,0.00040263182],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001489864,0.000022165621,0.00031032512,0.00007486835,0.000007923402,0.000051423594,0.000014759925,0.000042176514,0.9978104,0.0001273595,0.000031701133,0.0013577435],"study_design_scores_gemma":[0.000013084294,0.00032775872,0.0037673155,0.000008336338,0.000019558016,0.0007018595,0.000032424665,0.00028087408,0.9922943,0.000052413743,0.0024984234,0.000003663463],"about_ca_topic_score_codex":0.00017516338,"about_ca_topic_score_gemma":0.00016883021,"teacher_disagreement_score":0.0011688587,"about_ca_system_score_codex":0.00027321454,"about_ca_system_score_gemma":0.00016380781,"threshold_uncertainty_score":0.003910184},"labels":[],"label_agreement":null},{"id":"W2287780185","doi":"","title":"Myxoma virus induced activation of CC-chemokine receptor 5, CCR5","year":2000,"lang":"en","type":"dissertation","venue":"TSpace","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Myxoma virus; Tyrosine phosphorylation; Virus; Biology; Chemokine; Virology; Viral replication; Chemokine receptor; Phosphorylation; Receptor; Cell biology","score_opus":0.01795377555964167,"score_gpt":0.31255616672316705,"score_spread":0.2946023911635254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2287780185","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95921415,0.0095932195,0.0019515828,0.00083452236,0.00037150524,0.00014643364,0.0014612233,0.00007035376,0.026356976],"genre_scores_gemma":[0.9711599,0.0027357796,0.0007447059,0.00015404397,0.00007253382,0.00007767181,0.0013484407,0.00000898369,0.02369788],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987495,0.000017737371,0.000005684239,0.000013404471,0.0000242532,0.00006398118],"domain_scores_gemma":[0.9999591,0.000009597778,0.000008266025,0.0000056249646,0.00000619203,0.0000112432635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010244521,0.00021798129,0.00010617777,0.0001547042,0.0002110633,0.00035552264,0.000137846,0.0002444499,0.0056329644],"category_scores_gemma":[0.00014551195,0.00009723494,0.00027606313,0.00008157205,0.00011543642,0.00014756764,0.0001758802,0.00047695191,0.00077605335],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006292109,0.00010496833,0.0008580987,0.0001709933,0.000011441762,0.00039755975,0.00009937425,0.00021903813,0.9866584,0.0016531603,0.0017070067,0.0074907253],"study_design_scores_gemma":[0.00023823755,0.00088611944,0.117133714,0.0001181185,0.00006705357,0.0010780848,0.00047094197,0.0022678557,0.8393641,0.0005526257,0.037804868,0.000018369961],"about_ca_topic_score_codex":0.0044461796,"about_ca_topic_score_gemma":0.008592148,"teacher_disagreement_score":0.0056329644,"about_ca_system_score_codex":0.0007255514,"about_ca_system_score_gemma":0.0004364584,"threshold_uncertainty_score":0.018844128},"labels":[],"label_agreement":null},{"id":"W2291374773","doi":"10.4049/jimmunol.182.supp.134.77","title":"Toll-Like Receptor 3 Signaling on Macrophages is Required for Survival Following Coxsackievirus B4 Infection (134.77)","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"TLR3; Coxsackievirus; Innate immune system; Biology; Toll-like receptor; Immunology; Immune system; Signal transduction; Virus; TLR7; miR-155; Adoptive cell transfer; Viral replication; Virology; Enterovirus; Cell biology; microRNA; T cell; Gene; Genetics","score_opus":0.022410860729138202,"score_gpt":0.28454684373132777,"score_spread":0.26213598300218954,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2291374773","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99670863,0.000651322,0.0009368332,0.00011210923,0.000026046606,0.000016929465,0.00044973416,0.00006521935,0.0010331069],"genre_scores_gemma":[0.99595636,0.000295067,0.000805362,0.0000675427,0.00000957582,0.00004948651,0.0006531297,0.0000129539585,0.0021505493],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983907,0.00002493288,0.000012577157,0.000016151285,0.000028528904,0.00007875175],"domain_scores_gemma":[0.9998307,0.00001902361,0.000053856216,0.000018991452,0.000024891784,0.00005239769],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020600368,0.00027615106,0.00018471535,0.00022881715,0.00020854996,0.00027911805,0.00014022156,0.0003039174,0.0019586717],"category_scores_gemma":[0.00014323459,0.00011627781,0.00024423792,0.000084036576,0.00020498736,0.00015819377,0.00030055532,0.0005224272,0.0008023779],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002883811,0.000024125506,0.00054614875,0.000025135794,0.0000021780006,0.00007965925,0.000013771467,0.000013773332,0.9982101,0.000046428286,0.00005814738,0.00069226185],"study_design_scores_gemma":[0.00007886033,0.0007157923,0.06154914,0.000037555714,0.000028333676,0.0007791992,0.00017047774,0.000822199,0.93206775,0.00020096231,0.0035406323,0.000009083908],"about_ca_topic_score_codex":0.0005490745,"about_ca_topic_score_gemma":0.0005939552,"teacher_disagreement_score":0.0019586717,"about_ca_system_score_codex":0.00027153594,"about_ca_system_score_gemma":0.0002538302,"threshold_uncertainty_score":0.006552398},"labels":[],"label_agreement":null},{"id":"W2291448390","doi":"10.1016/j.celrep.2016.02.031","title":"CARMA3 Is a Host Factor Regulating the Balance of Inflammatory and Antiviral Responses against Viral Infection","year":2016,"lang":"en","type":"article","venue":"Cell Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Institute of Allergy and Infectious Diseases; National Cancer Institute","keywords":"Host (biology); Host factor; Viral infection; Host factors; Balance (ability); Virology; Biology; Immunology; Virus; Genetics; Neuroscience","score_opus":0.008728304277276513,"score_gpt":0.2287015440844073,"score_spread":0.2199732398071308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2291448390","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97833055,0.009098663,0.0064354213,0.0002811843,0.00009628413,0.00004033289,0.000796497,0.00032880733,0.0045922543],"genre_scores_gemma":[0.99507,0.0009030892,0.0014293882,0.00007821245,0.000017805365,0.000019309247,0.000516988,0.000021602411,0.0019437118],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987304,0.000014700704,0.000006723211,0.000029905552,0.000027009533,0.000048577764],"domain_scores_gemma":[0.99990094,0.000013880069,0.000026128535,0.00001155204,0.000016019907,0.000031574156],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012994766,0.00034869782,0.00023333979,0.00031184248,0.00031674327,0.0005882952,0.00017657418,0.00032165452,0.0016732805],"category_scores_gemma":[0.00011838112,0.00008887627,0.0003553346,0.00016284756,0.00027338156,0.00030758468,0.00031493328,0.00052074157,0.0005335558],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013693022,0.000014293256,0.0011522364,0.000038530303,0.000011193886,0.00014680103,0.000020259438,0.0000765726,0.9950977,0.0004094083,0.00011433945,0.0027818265],"study_design_scores_gemma":[0.000033805227,0.00024714498,0.02666433,0.000021080254,0.00005766894,0.0015495621,0.00014960411,0.0026107174,0.94675213,0.00044466904,0.021443697,0.000025594269],"about_ca_topic_score_codex":0.0007253378,"about_ca_topic_score_gemma":0.0009076025,"teacher_disagreement_score":0.0016732805,"about_ca_system_score_codex":0.0005029433,"about_ca_system_score_gemma":0.00027061484,"threshold_uncertainty_score":0.0055977106},"labels":[],"label_agreement":null},{"id":"W2302604202","doi":"10.1084/jem.20151764","title":"The macrophage IRF8/IRF1 regulome is required for protection against infections and is associated with chronic inflammation","year":2016,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":270,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine; McGill University","funders":"National Institute of Allergy and Infectious Diseases; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; National Institutes of Health; Human Frontier Science Program; Canada Research Chairs; McGill University","keywords":"Inflammation; Macrophage; IRF1; Immunology; Medicine; Biology; Genetics; Transcription factor; Gene; In vitro","score_opus":0.015597458717601584,"score_gpt":0.26919468003947566,"score_spread":0.25359722132187407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2302604202","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99473923,0.0013033194,0.0019822503,0.000060243245,0.000009591912,0.000011254195,0.0010056425,0.00008430068,0.00080414844],"genre_scores_gemma":[0.9951572,0.00042280037,0.0017646133,0.000042614953,0.000010042576,0.00002248052,0.0014911441,0.000024350373,0.001064764],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998171,0.000016304977,0.000010069049,0.000050025395,0.00005069488,0.000055979748],"domain_scores_gemma":[0.9997844,0.000020446845,0.000109022854,0.00002281441,0.00002403437,0.000039157567],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001487952,0.00028480426,0.00026854812,0.00044748772,0.00023938973,0.00020132602,0.00014033726,0.00022906881,0.0014299189],"category_scores_gemma":[0.00013619689,0.00016623586,0.00026442483,0.00025627555,0.00024488522,0.00012978307,0.00022920997,0.00041089833,0.0005372121],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016376686,0.000014380998,0.0041146907,0.00003090611,0.000009072698,0.0000744332,0.000012799424,0.000043173022,0.9934007,0.00007561855,0.00006302856,0.001997444],"study_design_scores_gemma":[0.000045653196,0.0003483123,0.41312465,0.000037904396,0.00008183298,0.003000088,0.00012064157,0.001142795,0.574978,0.00063175923,0.0064659882,0.00002232943],"about_ca_topic_score_codex":0.00027806702,"about_ca_topic_score_gemma":0.00044377713,"teacher_disagreement_score":0.0014299189,"about_ca_system_score_codex":0.00019943682,"about_ca_system_score_gemma":0.00021292857,"threshold_uncertainty_score":0.0047835708},"labels":[],"label_agreement":null},{"id":"W2304807948","doi":"10.1158/1538-8514.tumang15-b05","title":"Abstract B05: An immune modulatory role for the Fes protein tyrosine kinase","year":2015,"lang":"en","type":"article","venue":"Molecular Cancer Therapeutics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Cell biology; Signal transduction; Biology; Immune system; Receptor; Tyrosine kinase; Cancer research; Immunology; Biochemistry","score_opus":0.035565328596908204,"score_gpt":0.2956219460281028,"score_spread":0.2600566174311946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2304807948","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96256834,0.013303618,0.006910197,0.0012953925,0.00040422805,0.000072998926,0.0018892165,0.00025853523,0.013297421],"genre_scores_gemma":[0.9855618,0.0020670544,0.0018804554,0.00019087507,0.000050024868,0.000028981287,0.0013857115,0.000015403783,0.008819702],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99995065,0.000007386625,0.0000030447811,0.000009684603,0.000011984006,0.000017124503],"domain_scores_gemma":[0.9999536,0.0000039834217,0.000010947105,0.0000029112057,0.000007109518,0.000021412123],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008394751,0.00030418552,0.00012481549,0.00016279973,0.00020081013,0.00025338965,0.00023540725,0.00036965727,0.004213403],"category_scores_gemma":[0.000071637216,0.00005492095,0.00020699562,0.00008134453,0.00018477453,0.00014482647,0.00017843167,0.00042330028,0.0011780114],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051920157,0.000047142235,0.00020167774,0.00007624202,0.0000061121805,0.00019317314,0.0000075024464,0.0000995167,0.9939873,0.0009027159,0.0005136107,0.0034457287],"study_design_scores_gemma":[0.0002883279,0.0010265633,0.018067848,0.000068871814,0.00003929594,0.0024216296,0.00013415016,0.0024495581,0.9297382,0.0009657908,0.044778857,0.000020797259],"about_ca_topic_score_codex":0.00050742587,"about_ca_topic_score_gemma":0.00023707518,"teacher_disagreement_score":0.004213403,"about_ca_system_score_codex":0.00031198698,"about_ca_system_score_gemma":0.00013843838,"threshold_uncertainty_score":0.014095187},"labels":[],"label_agreement":null},{"id":"W2307617681","doi":"10.1186/s12977-016-0253-1","title":"The interferon-induced antiviral protein PML (TRIM19) promotes the restriction and transcriptional silencing of lentiviruses in a context-specific, isoform-specific fashion","year":2016,"lang":"en","type":"article","venue":"Retrovirology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Trois-Rivières","funders":"Canadian Institutes of Health Research; Université du Québec à Trois-Rivières","keywords":"Promyelocytic leukemia protein; Biology; Gene isoform; Virus latency; Virology; Gene silencing; Viral replication; Cell culture; Interferon; Gene knockdown; SAMHD1; Gene; Transcription factor; Virus; RNA; Nuclear protein; Genetics; Reverse transcriptase","score_opus":0.02109838611628067,"score_gpt":0.22985340738622412,"score_spread":0.20875502126994344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2307617681","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98827296,0.0032691115,0.004867853,0.00008926632,0.000038382204,0.00003662455,0.00041330763,0.00015912864,0.0028534073],"genre_scores_gemma":[0.9928019,0.001034979,0.0024778927,0.00004643628,0.000015595617,0.000025324856,0.000597382,0.00004016633,0.0029602945],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998772,0.000015751582,0.000012803136,0.00003337906,0.000031577474,0.000029327193],"domain_scores_gemma":[0.99988866,0.000017506623,0.000037406135,0.000021262638,0.000011758626,0.000023387476],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016110294,0.00024133356,0.0001741711,0.00020602626,0.0001252921,0.0004100724,0.00020919043,0.00018553277,0.0013699699],"category_scores_gemma":[0.000100588746,0.00012366408,0.0002496844,0.00012360196,0.0001948187,0.00015093942,0.000259853,0.000514762,0.00048497852],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003907472,0.00000924529,0.00009723661,0.000015550648,0.0000028522684,0.000021601389,0.000007768367,0.000021749725,0.99894875,0.00007052686,0.000022287728,0.000743425],"study_design_scores_gemma":[0.000010436032,0.00010239614,0.0017608397,0.000006069916,0.000012665386,0.00015191211,0.000013413709,0.0005018062,0.9945516,0.00003946639,0.002847661,0.0000016615224],"about_ca_topic_score_codex":0.00028077443,"about_ca_topic_score_gemma":0.00044874405,"teacher_disagreement_score":0.0013699699,"about_ca_system_score_codex":0.00030146906,"about_ca_system_score_gemma":0.00016307629,"threshold_uncertainty_score":0.0045830607},"labels":[],"label_agreement":null},{"id":"W2312424967","doi":"10.1139/gen-2012-0178","title":"Finding of <i>IFNγ</i> gene enhancers and their core sequences","year":2013,"lang":"en","type":"article","venue":"Genome","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Enhancer; Biology; Gene; Alu element; Genetics; Reporter gene; Enhancer trap; Molecular biology; Tandem repeat; Repeated sequence; DNA; Regulatory sequence; Gene expression; Human genome; Genome","score_opus":0.019202641851287658,"score_gpt":0.23236208033333078,"score_spread":0.2131594384820431,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2312424967","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9283603,0.0012701134,0.06646085,0.00012350535,0.00003476241,0.000095929565,0.0005917356,0.00023096912,0.002831954],"genre_scores_gemma":[0.9540198,0.00035438553,0.041711655,0.00009690792,0.000010410757,0.00005775472,0.0013795848,0.00012742475,0.0022421002],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987805,0.0000152538705,0.000007545066,0.00004694644,0.00002328099,0.000028953167],"domain_scores_gemma":[0.99966764,0.00011254708,0.00009410847,0.000041308547,0.000038434024,0.000045870183],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020977907,0.00028540663,0.00031101113,0.00028414195,0.00018721136,0.00027833384,0.00022850059,0.00031159015,0.0016392283],"category_scores_gemma":[0.00032048216,0.00025773892,0.00044682578,0.00016906382,0.00035788878,0.00024863798,0.00020985468,0.0008091465,0.00072877755],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004573355,0.0000059594718,0.00014425816,0.000014457224,0.0000012977287,0.0000117023355,0.000010891197,0.000027095019,0.9987281,0.00010087482,0.000006645051,0.0009029611],"study_design_scores_gemma":[0.000007802268,0.000047739606,0.0027982795,0.000006714036,0.000009323757,0.00011538138,0.000016398351,0.00054072647,0.99493164,0.000100593,0.0014227232,0.0000026077757],"about_ca_topic_score_codex":0.0004646664,"about_ca_topic_score_gemma":0.000708094,"teacher_disagreement_score":0.0016392283,"about_ca_system_score_codex":0.00031720017,"about_ca_system_score_gemma":0.000251547,"threshold_uncertainty_score":0.0054837465},"labels":[],"label_agreement":null},{"id":"W2313639071","doi":"10.1189/jlb.3ce0314-163r","title":"Editorial: You give me fever: transcriptional responses to LPS","year":2014,"lang":"en","type":"editorial","venue":"Journal of Leukocyte Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre","funders":"","keywords":"Biology; Inflammation; Macrophage; Immunology; Transcriptional regulation; Transcription factor; Genetics; Gene","score_opus":0.01125464816777087,"score_gpt":0.28473597350223706,"score_spread":0.2734813253344662,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2313639071","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000561335,0.003225353,0.00010349491,0.032976378,0.96296924,0.000012130903,0.000036139452,0.000038112375,0.00058301346],"genre_scores_gemma":[0.00062374375,0.0034418984,0.000086086846,0.023020504,0.9664019,0.000017077486,0.000034418965,0.000027133858,0.0063473107],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.996729,0.0005884661,0.00036954644,0.0004322375,0.0016054005,0.0002754039],"domain_scores_gemma":[0.9876681,0.0041642236,0.0007411855,0.00029336146,0.0047702007,0.0023628871],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0060138227,0.0035005033,0.00309461,0.002837628,0.00296126,0.0057903803,0.0036269324,0.012918686,0.01036263],"category_scores_gemma":[0.017805366,0.0011727196,0.0026554363,0.00096038857,0.0024685124,0.003857529,0.0017156727,0.020365272,0.0074962173],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009383783,0.000015346592,0.000031323143,0.00015964013,0.000022991102,0.0001835555,0.000014903521,0.000023825984,0.0001275777,0.00021180227,0.99589205,0.0032230776],"study_design_scores_gemma":[0.00013840426,0.00009349481,0.00053941703,0.00045771082,0.00012430424,0.00060166785,0.00008520563,0.00023535118,0.00051701895,0.001269642,0.99590045,0.00003723246],"about_ca_topic_score_codex":0.0010933715,"about_ca_topic_score_gemma":0.002479828,"teacher_disagreement_score":0.012918686,"about_ca_system_score_codex":0.0026088594,"about_ca_system_score_gemma":0.0024274786,"threshold_uncertainty_score":0.03466642},"labels":[],"label_agreement":null},{"id":"W2318077359","doi":"10.1021/pr5001779","title":"Proteasomal Serine Hydrolases Are Up-Regulated by and Required for Influenza Virus Infection","year":2014,"lang":"en","type":"article","venue":"Journal of Proteome Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital Research Institute of Manitoba; University of Manitoba","funders":"Canadian Institutes of Health Research","keywords":"Virus; Proteases; Influenza A virus; Biology; MG132; Viral replication; Serine protease; Virology; Serine; Immune system; Serine hydrolase; Serine Proteinase Inhibitors; Protease; Enzyme; Proteasome; Cell biology; Proteasome inhibitor; Biochemistry; Immunology","score_opus":0.054258860807782264,"score_gpt":0.36188289849433,"score_spread":0.3076240376865477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2318077359","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941895,0.0027578694,0.0013853058,0.00007431038,0.00002478786,0.000015246662,0.00080889906,0.000052884854,0.0006911494],"genre_scores_gemma":[0.99486035,0.0009877664,0.0018600646,0.000038581777,0.000011397944,0.000022669854,0.0011748647,0.000013761401,0.0010305599],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986625,0.00001532286,0.00001794729,0.000028783124,0.00003706974,0.00003456509],"domain_scores_gemma":[0.99989104,0.000012507608,0.000039697537,0.000011201808,0.000014135099,0.000031344873],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012610259,0.00026744686,0.0002694802,0.00025746014,0.00018882408,0.0003273957,0.00008869788,0.0001999801,0.0008789347],"category_scores_gemma":[0.00013169456,0.00014993158,0.00028790015,0.00022842782,0.00018146394,0.00021523942,0.00015251029,0.0003838291,0.0003099786],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007330552,0.0000044428198,0.000423894,0.000014415164,0.0000031998902,0.00003145062,0.0000038747417,0.000010602489,0.9991053,0.000014301579,0.000011617979,0.0003036845],"study_design_scores_gemma":[0.000008997637,0.00012972616,0.09307599,0.0000057445995,0.000024754823,0.00059161306,0.000053342377,0.00051793637,0.9037737,0.000066524386,0.0017456905,0.0000058410324],"about_ca_topic_score_codex":0.0005494844,"about_ca_topic_score_gemma":0.0008811145,"teacher_disagreement_score":0.0008789347,"about_ca_system_score_codex":0.00032024452,"about_ca_system_score_gemma":0.00020070023,"threshold_uncertainty_score":0.0029402971},"labels":[],"label_agreement":null},{"id":"W2318991709","doi":"10.1158/1538-7445.am2012-sy15-01","title":"Abstract SY15-01: Cellular context-specific tumor suppression by <i>PTPN11</i>","year":2012,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto; Ontario Institute for Cancer Research","funders":"","keywords":"PTPN11; Biology; Cancer research; Population; Pathology; Mutation; Genetics; Medicine; Gene; KRAS","score_opus":0.06171657700198393,"score_gpt":0.3535917091381917,"score_spread":0.2918751321362078,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2318991709","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9783483,0.0029689423,0.004002303,0.00045041175,0.00032853967,0.000119869255,0.0050197924,0.00046097775,0.008300758],"genre_scores_gemma":[0.9840927,0.0008757338,0.002601891,0.0001730658,0.0000400536,0.000116382296,0.0047993786,0.00013440935,0.0071663936],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99967766,0.000053300115,0.00004819449,0.00007424241,0.00007248276,0.00007416287],"domain_scores_gemma":[0.999777,0.000041638203,0.000050533326,0.000032712975,0.000014289933,0.000083851344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024614294,0.00058252236,0.00046570666,0.0003284261,0.000272949,0.0005860042,0.00046329002,0.00044026892,0.0034731205],"category_scores_gemma":[0.00013698278,0.00019138404,0.0003471442,0.0002841376,0.0005631695,0.0002316228,0.00035571013,0.0011883723,0.0016779917],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016895069,0.00006128035,0.00009400984,0.000044605364,0.000007547908,0.00009821865,0.000010607826,0.00011665388,0.9977737,0.00033047187,0.00023840912,0.0010556377],"study_design_scores_gemma":[0.000060208746,0.0005348883,0.0021613194,0.000008743431,0.000018017668,0.00046819999,0.00003433062,0.0013884517,0.98912805,0.00007700214,0.006112244,0.000008450029],"about_ca_topic_score_codex":0.0010009325,"about_ca_topic_score_gemma":0.0013134674,"teacher_disagreement_score":0.0034731205,"about_ca_system_score_codex":0.00038526487,"about_ca_system_score_gemma":0.00041710475,"threshold_uncertainty_score":0.011618793},"labels":[],"label_agreement":null},{"id":"W2322522340","doi":"10.1371/journal.ppat.1005546","title":"cGAS Senses Human Cytomegalovirus and Induces Type I Interferon Responses in Human Monocyte-Derived Cells","year":2016,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":178,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Helmholtz-Alberta Initiative; Deutsche Forschungsgemeinschaft","keywords":"Human cytomegalovirus; Interferon; Monocyte; Biology; Interferon type I; Sting; SAMHD1; Immune system; Stimulator of interferon genes; Virology; Innate immune system; TLR9; Virus; Immunology; Cell biology; Gene; RNA; Gene expression; Genetics","score_opus":0.036473941908496475,"score_gpt":0.2738744687843276,"score_spread":0.2374005268758311,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2322522340","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98678106,0.0024766407,0.006144971,0.00017956148,0.00009775771,0.00007984186,0.0016159731,0.00021572111,0.0024084155],"genre_scores_gemma":[0.99019766,0.00089843926,0.004491404,0.00014966815,0.00001696112,0.00007611732,0.0013902261,0.000019675672,0.0027597898],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998185,0.000025622468,0.000017174098,0.000039399874,0.000052667932,0.00004661246],"domain_scores_gemma":[0.9999391,0.000008982463,0.0000141743885,0.000010863631,0.000009408398,0.000017512883],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015229623,0.0003071,0.00024640522,0.00016456538,0.00012657375,0.00024821635,0.00009212004,0.00022926,0.00071042357],"category_scores_gemma":[0.00008594441,0.00012659197,0.00022991672,0.00016611528,0.00014352937,0.00008417293,0.00016647205,0.0005070193,0.00037260217],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052116728,0.000007806925,0.00008683309,0.000020864163,0.0000014504715,0.000018748464,0.00000920911,0.000018873645,0.99932575,0.000028524402,0.000032428874,0.0003975704],"study_design_scores_gemma":[0.000018657845,0.0002153819,0.0034750071,0.0000062042022,0.000009097773,0.00015203224,0.000025076413,0.00057096354,0.9922069,0.000035137935,0.003279992,0.0000055786954],"about_ca_topic_score_codex":0.00057780667,"about_ca_topic_score_gemma":0.0010241712,"teacher_disagreement_score":0.00071042357,"about_ca_system_score_codex":0.00028330286,"about_ca_system_score_gemma":0.00020519561,"threshold_uncertainty_score":0.002376616},"labels":[],"label_agreement":null},{"id":"W2322631776","doi":"10.1016/j.cyto.2010.07.254","title":"PS2-49 Natural RNA agonists of RIG-I trigger a robust antiviral response that inhibits influenza infection","year":2010,"lang":"en","type":"article","venue":"Cytokine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"RIG-I; Virology; RNA; Biology; Gene; Biochemistry","score_opus":0.018096228611154022,"score_gpt":0.26510427770483685,"score_spread":0.24700804909368285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2322631776","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9888025,0.001493138,0.0022409325,0.000295348,0.0002839264,0.000064209205,0.000726751,0.00017875432,0.0059143156],"genre_scores_gemma":[0.9950529,0.0004442103,0.00085285364,0.00012724551,0.00006806449,0.00004855645,0.00086660066,0.000024317234,0.0025151628],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99975866,0.000045357552,0.000021173073,0.000023243649,0.000057603578,0.000093983035],"domain_scores_gemma":[0.99985385,0.000037730788,0.000021333191,0.000032506683,0.000012354359,0.00004212314],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023326659,0.0004995841,0.0003163413,0.00020451179,0.00025789352,0.00046858907,0.00017084737,0.00036116887,0.0022416348],"category_scores_gemma":[0.00023346326,0.00015934768,0.00031897545,0.00010908024,0.00039088994,0.00023337404,0.00021757741,0.0011287933,0.0008401172],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005142719,0.00006456117,0.00009595644,0.000020585714,0.000005994699,0.00003269181,0.0000060008647,0.00011865685,0.9978265,0.00011538738,0.00017143143,0.0010280708],"study_design_scores_gemma":[0.000080727405,0.00064535043,0.0027113978,0.000004555328,0.000011443348,0.00012825716,0.000028217708,0.0008346745,0.9938055,0.0000693085,0.0016758555,0.0000046658943],"about_ca_topic_score_codex":0.000370293,"about_ca_topic_score_gemma":0.0006682758,"teacher_disagreement_score":0.0022416348,"about_ca_system_score_codex":0.00031718114,"about_ca_system_score_gemma":0.00031663215,"threshold_uncertainty_score":0.007499039},"labels":[],"label_agreement":null},{"id":"W2325608780","doi":"10.1038/ni.3409","title":"DNA polymerase-α regulates the activation of type I interferons through cytosolic RNA:DNA synthesis","year":2016,"lang":"en","type":"article","venue":"Nature Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":154,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"National Center for Advancing Translational Sciences; National Institute of Allergy and Infectious Diseases; National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; University of Texas Southwestern Medical Center","keywords":"DNA; Polymerase; DNA polymerase; Molecular biology; DNA polymerase II; Chemistry; DNA clamp; Biology; RNA; Cell biology; Biochemistry; Gene; Reverse transcriptase","score_opus":0.009647442861335702,"score_gpt":0.2487131194293222,"score_spread":0.2390656765679865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2325608780","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.906476,0.03002472,0.041766953,0.0017769935,0.0014286969,0.00012225696,0.0009624364,0.0006756308,0.016766373],"genre_scores_gemma":[0.9864972,0.003754581,0.0032676863,0.00014991128,0.00019558794,0.000021921287,0.00044369447,0.00007551827,0.005594],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99964094,0.00006094781,0.000022846232,0.00011837304,0.00006482628,0.00009196273],"domain_scores_gemma":[0.9995505,0.00007072046,0.00014719885,0.00004685111,0.000076482516,0.00010827647],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044829768,0.00069834583,0.00032443524,0.00032368448,0.00027211077,0.0011375686,0.0002587383,0.00039755838,0.0021990528],"category_scores_gemma":[0.0004924963,0.00027173045,0.0003594593,0.00018056178,0.00058541296,0.0005720265,0.0004398352,0.00087275245,0.0015472788],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044097935,0.000021449783,0.00039842597,0.00007362707,0.0000053425733,0.00007030672,0.000028222432,0.00010240988,0.9937596,0.0008960457,0.00014996635,0.0040536798],"study_design_scores_gemma":[0.00007926506,0.00020766683,0.005546035,0.00004036108,0.000014749177,0.00031483176,0.00007454598,0.0014102313,0.98639643,0.0011882045,0.0047179437,0.0000098282935],"about_ca_topic_score_codex":0.00031332625,"about_ca_topic_score_gemma":0.00037376676,"teacher_disagreement_score":0.0021990528,"about_ca_system_score_codex":0.0010348324,"about_ca_system_score_gemma":0.0003736816,"threshold_uncertainty_score":0.0075082183},"labels":[],"label_agreement":null},{"id":"W2325873006","doi":"10.1158/1538-7445.am2011-4696","title":"Abstract 4696: TRAF2 plays a critical role in maintaining lymphocyte homeostasis by regulating the basal activities of IKK and caspase-8","year":2011,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"TRAF2; Tumor necrosis factor alpha; Cell biology; Biology; Apoptosis; Basal (medicine); Internal medicine; Endocrinology; Medicine; Biochemistry; Tumor necrosis factor receptor","score_opus":0.06647141624584162,"score_gpt":0.35819456548081186,"score_spread":0.2917231492349702,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2325873006","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8986694,0.03752328,0.021818586,0.0023445021,0.0013276729,0.0001223627,0.014555159,0.0011727045,0.022466272],"genre_scores_gemma":[0.9293031,0.008203471,0.0059875525,0.00039846977,0.0004604687,0.000075924494,0.010840604,0.0001963885,0.044533964],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99977046,0.000023997003,0.000033714856,0.000075085714,0.00006141539,0.000035366986],"domain_scores_gemma":[0.99982494,0.000010677782,0.00006551253,0.000017952969,0.00002205803,0.00005887035],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019400827,0.00111078,0.00030749702,0.00047321833,0.0003650977,0.0006715162,0.00044824273,0.0005653104,0.011609306],"category_scores_gemma":[0.00012311133,0.0001620024,0.0003866855,0.00045701393,0.00034928456,0.00063401426,0.00040561226,0.00082132476,0.0045302957],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041367018,0.000023637725,0.00027233892,0.00015884418,0.0000110946385,0.00015773633,0.000010371998,0.000040900442,0.99637645,0.0002554825,0.00031245378,0.001967006],"study_design_scores_gemma":[0.00007641341,0.00027977987,0.007808005,0.000037091842,0.000045168563,0.0017340156,0.000039070488,0.00025899033,0.9691914,0.00025204706,0.020268042,0.000010066347],"about_ca_topic_score_codex":0.00032007633,"about_ca_topic_score_gemma":0.00026547545,"teacher_disagreement_score":0.011609306,"about_ca_system_score_codex":0.0004883152,"about_ca_system_score_gemma":0.00024768186,"threshold_uncertainty_score":0.038837016},"labels":[],"label_agreement":null},{"id":"W2327960993","doi":"10.1038/ni.3433","title":"S6K-STING interaction regulates cytosolic DNA–mediated activation of the transcription factor IRF3","year":2016,"lang":"en","type":"article","venue":"Nature Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":82,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; University of Ottawa; McMaster University; Children's Hospital of Eastern Ontario; McMaster University Medical Centre","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"IRF3; Transcription factor; Cell biology; TANK-binding kinase 1; Biology; Interferon regulatory factors; Stimulator of interferon genes; Effector; P70-S6 Kinase 1; Sting; Signal transduction; Kinase; PI3K/AKT/mTOR pathway; Genetics; Protein kinase A; Gene; MAP kinase kinase kinase; Innate immune system; Receptor","score_opus":0.009501375114197146,"score_gpt":0.24114152681252643,"score_spread":0.23164015169832927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2327960993","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99117625,0.0016729129,0.0025478057,0.00032702807,0.000092625436,0.000012732493,0.00044527784,0.00018145992,0.0035438691],"genre_scores_gemma":[0.9968374,0.00033087475,0.00066722883,0.000055815734,0.000012581682,0.000007028346,0.00047413522,0.000030021445,0.001584867],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99971586,0.000040386538,0.0000125905835,0.000054239885,0.00005571881,0.0001210308],"domain_scores_gemma":[0.999859,0.000018545017,0.000043805245,0.000019193332,0.000016984415,0.000042444175],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001993583,0.00039995837,0.0002603969,0.00027521665,0.00048424146,0.0006791885,0.0002959371,0.0003213768,0.0040783435],"category_scores_gemma":[0.00020688235,0.00021835737,0.00051937514,0.00017000805,0.00040581747,0.0004440816,0.000525975,0.0010462297,0.0015362003],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047814846,0.000032360316,0.00044558584,0.00003196678,0.000005569443,0.00006318983,0.000019835757,0.000091963455,0.9967548,0.00042034232,0.00019634498,0.0014599311],"study_design_scores_gemma":[0.00006612712,0.00012964383,0.025612261,0.000018297842,0.000019483932,0.00030970655,0.00013642805,0.0040655304,0.9652173,0.0005964139,0.003813294,0.000015515083],"about_ca_topic_score_codex":0.0005972263,"about_ca_topic_score_gemma":0.0010361415,"teacher_disagreement_score":0.0040783435,"about_ca_system_score_codex":0.00088368304,"about_ca_system_score_gemma":0.00037907038,"threshold_uncertainty_score":0.013643444},"labels":[],"label_agreement":null},{"id":"W2329976634","doi":"10.1158/1538-7445.am2011-4108","title":"Abstract 4108: BH3 only Bcl-2 family member BNIP3 repressed expression of death receptor 5 (DR5) in glioblastoma cells: Implications for regulation of the tumor necrosis factor related apoptosis inducing ligand (TRAIL) cell death pathway","year":2011,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Apoptosis; Programmed cell death; Cancer research; Tumor necrosis factor alpha; Temozolomide; Glioma; Biology; Small hairpin RNA; Receptor; Chemistry; Immunology; Genetics","score_opus":0.0864611690604593,"score_gpt":0.3317901583564123,"score_spread":0.24532898929595298,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2329976634","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994042,0.0011971568,0.0015917353,0.00017561005,0.00006872517,0.000027522581,0.001103275,0.00006170934,0.0017321672],"genre_scores_gemma":[0.99135876,0.00047852617,0.0010955418,0.000117741554,0.000009207204,0.000043155957,0.0026261874,0.000016891994,0.004253925],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999907,0.000010668174,0.000008303217,0.0000138290725,0.000026295906,0.000033744327],"domain_scores_gemma":[0.999962,0.0000062358176,0.0000073792944,0.0000040975365,0.0000070925184,0.0000133042695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005405076,0.00023339986,0.00015221682,0.0001255083,0.00017373239,0.00016333694,0.00013114967,0.0001876911,0.0032338812],"category_scores_gemma":[0.00005554886,0.00007111774,0.00018631048,0.00014487661,0.00013096909,0.00010192653,0.00015538752,0.000508243,0.0007983944],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010078854,0.000024923202,0.000102448,0.00002478386,0.0000019613528,0.000046499703,0.000008990366,0.000018922225,0.99913555,0.00004292202,0.00005677336,0.00043558233],"study_design_scores_gemma":[0.0000323523,0.00025792926,0.0072494647,0.0000068832514,0.000012074607,0.00026741787,0.000051133662,0.00089236547,0.98856634,0.00005586571,0.002603987,0.0000042128545],"about_ca_topic_score_codex":0.0015751041,"about_ca_topic_score_gemma":0.0014973546,"teacher_disagreement_score":0.0032338812,"about_ca_system_score_codex":0.00030556094,"about_ca_system_score_gemma":0.0002465387,"threshold_uncertainty_score":0.010818422},"labels":[],"label_agreement":null},{"id":"W2332102698","doi":"10.1016/j.cyto.2009.07.540","title":"The E3 ubiquitin ligase Triad3A negatively regulates the RIG-I/MAVS signaling pathway by targeting TRAF3 for degradation","year":2009,"lang":"en","type":"article","venue":"Cytokine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Terry Fox Research Institute","funders":"","keywords":"Ubiquitin ligase; Biology; Signal transducing adaptor protein; Ubiquitin; Signal transduction; Cell biology; Innate immune system; RIG-I; Sendai virus; Interferon; Cancer research; Immune system; Immunology; Virus; Gene; Genetics","score_opus":0.01268715538099892,"score_gpt":0.2439033760918487,"score_spread":0.23121622071084977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2332102698","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9474513,0.01641801,0.020598503,0.0018699492,0.00049416587,0.00006127901,0.001943507,0.0019051818,0.009258053],"genre_scores_gemma":[0.99100596,0.0011221318,0.0025378482,0.00017639229,0.000038806862,0.000019819283,0.0007265266,0.00012292777,0.0042496077],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99934393,0.00012206883,0.000049545226,0.00012434306,0.00016878158,0.00019130256],"domain_scores_gemma":[0.9995578,0.000036547117,0.00016287128,0.00006334335,0.00008565853,0.000093768555],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004766583,0.0006992105,0.0005293902,0.000735345,0.0006834092,0.0012787763,0.00044139134,0.0006356079,0.0031535819],"category_scores_gemma":[0.00039920074,0.0003447255,0.0008250606,0.00042324277,0.00071146426,0.00078857876,0.0007890873,0.0013483982,0.0032489426],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005059044,0.000021199088,0.00093721657,0.00005706879,0.000025530386,0.00021730857,0.000019275023,0.00020218099,0.9925932,0.00066108874,0.0008589419,0.003900917],"study_design_scores_gemma":[0.000039167797,0.00009598707,0.006902437,0.000009218252,0.000023323637,0.0013602261,0.00007406188,0.0031107895,0.98010385,0.00067548186,0.00758509,0.000020398642],"about_ca_topic_score_codex":0.00064192,"about_ca_topic_score_gemma":0.00090297085,"teacher_disagreement_score":0.0031535819,"about_ca_system_score_codex":0.0013052386,"about_ca_system_score_gemma":0.0005625096,"threshold_uncertainty_score":0.010549843},"labels":[],"label_agreement":null},{"id":"W2333231930","doi":"10.1017/s0317167100015274","title":"A New Therapeutic Target for the Treatment of Multiple Sclerosis","year":2012,"lang":"fr","type":"article","venue":"Canadian Journal of Neurological Sciences / Journal Canadien des Sciences Neurologiques","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Multiple sclerosis; Content (measure theory); Medicine; Action (physics); Physical medicine and rehabilitation; Computer science; Mathematics; Physics; Immunology","score_opus":0.07894586273937258,"score_gpt":0.27954614890079693,"score_spread":0.20060028616142433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2333231930","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09705847,0.7787218,0.01476309,0.029474832,0.008693588,0.00047429674,0.0016560038,0.0007680014,0.06838997],"genre_scores_gemma":[0.32208222,0.5565729,0.017790409,0.008998042,0.0034773878,0.0004661785,0.0022282337,0.00014578961,0.08823882],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9998797,0.000028517768,0.0000083967625,0.000017567461,0.000036615897,0.00002925525],"domain_scores_gemma":[0.9999224,0.000015376098,0.000015310456,0.000006260931,0.000019268151,0.00002143955],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035828684,0.0003204855,0.000577328,0.0005726765,0.00034584518,0.0009022584,0.00034297843,0.0008188745,0.013463062],"category_scores_gemma":[0.00018420475,0.00013013501,0.00044640386,0.00034226978,0.00027521641,0.00074382056,0.00034246268,0.001496711,0.003800082],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012383881,0.0006774068,0.0007491595,0.0024835526,0.000104936924,0.0011312105,0.00018172224,0.00041850578,0.19695525,0.008784439,0.046442326,0.74083316],"study_design_scores_gemma":[0.0008222138,0.003506418,0.005803337,0.0010137592,0.00025551525,0.0032990836,0.00021122521,0.00083864725,0.049969602,0.0068092905,0.92741716,0.0000536141],"about_ca_topic_score_codex":0.00032205004,"about_ca_topic_score_gemma":0.0013790776,"teacher_disagreement_score":0.013463062,"about_ca_system_score_codex":0.00035197544,"about_ca_system_score_gemma":0.00033946987,"threshold_uncertainty_score":0.045038402},"labels":[],"label_agreement":null},{"id":"W2333908030","doi":"10.1385/ir:35:1:27","title":"Interferons and viruses","year":2006,"lang":"en","type":"review","venue":"Immunologic Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Rehabilitation Institute; University of Toronto; University Health Network","funders":"","keywords":"Signal transduction; Biology; Immunology; Cell biology; Immune system; Interferon; Translation (biology); Master regulator; Transcription factor; Gene; Genetics","score_opus":0.3071227314169199,"score_gpt":0.487348053681902,"score_spread":0.18022532226498206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2333908030","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000060428923,0.9954651,0.00017646812,0.00034209059,0.0017925632,0.0000058480605,0.000009011524,0.000008178696,0.0021402817],"genre_scores_gemma":[0.0007259173,0.9915924,0.00028836745,0.00060147326,0.0023496284,0.000014873663,0.000032610737,0.0000029914606,0.004391662],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99973375,0.000052799096,0.000031180265,0.000041403022,0.00010743797,0.000033429922],"domain_scores_gemma":[0.99976486,0.00009691465,0.000032313186,0.000015292022,0.000054335993,0.000036234498],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007117426,0.001691391,0.002013283,0.0021065762,0.00057869486,0.0017393974,0.001262288,0.0017788395,0.0048547653],"category_scores_gemma":[0.0007967667,0.0004907126,0.00042060588,0.0023128628,0.0013195253,0.0027034224,0.0011986381,0.0029794034,0.004835916],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012616743,0.00007064196,0.0001235987,0.0056436146,0.00003613348,0.00027871015,0.00008939592,0.0003140126,0.0033959222,0.0074211513,0.11013363,0.87236685],"study_design_scores_gemma":[0.000010861398,0.000020012272,0.00013097779,0.00079205155,0.000018794233,0.00054848695,0.000027030808,0.00003352742,0.00024559768,0.0024337776,0.9957333,0.000005620135],"about_ca_topic_score_codex":0.0008667809,"about_ca_topic_score_gemma":0.0015610638,"teacher_disagreement_score":0.0048547653,"about_ca_system_score_codex":0.000981523,"about_ca_system_score_gemma":0.0013069148,"threshold_uncertainty_score":0.016240835},"labels":[],"label_agreement":null},{"id":"W2334518515","doi":"10.1158/1538-7445.am2013-3163","title":"Abstract 3163: ZMAT3, a signature gene for sporadic osteosarcoma.","year":2013,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Copy-number variation; Osteosarcoma; Genotyping; Biology; Genetics; SNP array; Cancer; Copy number analysis; Malignancy; Candidate gene; Genotype; Gene; Genome; Single-nucleotide polymorphism; Cancer research","score_opus":0.05946497809437931,"score_gpt":0.37528748004417756,"score_spread":0.3158225019497982,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2334518515","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9862249,0.0012321492,0.0040953006,0.00012991675,0.000058445585,0.000038034246,0.0071482193,0.0002530011,0.00081999885],"genre_scores_gemma":[0.98811674,0.00031201137,0.0039328355,0.00007966095,0.0000273792,0.000029311776,0.0061988505,0.00004944766,0.0012538405],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986696,0.000008615121,0.000011640117,0.000046864778,0.00005115935,0.000014745391],"domain_scores_gemma":[0.999821,0.00004239645,0.000079222555,0.000011507049,0.000020876892,0.000025022686],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012555414,0.00035058448,0.00028367422,0.000879721,0.00029947955,0.00021362322,0.00020623105,0.00033233897,0.002851299],"category_scores_gemma":[0.000401275,0.00010863244,0.0003671341,0.0010898904,0.00018231533,0.00008392254,0.0001775876,0.00020087505,0.00067991577],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012931527,0.000045210938,0.09420742,0.00031009305,0.0001169155,0.0051787095,0.00010271417,0.0007835193,0.8738199,0.00027813343,0.0014726238,0.022391625],"study_design_scores_gemma":[0.00010651711,0.00030373895,0.753143,0.000046900906,0.00030114682,0.02712155,0.00010079232,0.0070044687,0.19746809,0.00071619946,0.013650011,0.00003744569],"about_ca_topic_score_codex":0.0016778734,"about_ca_topic_score_gemma":0.0022186434,"teacher_disagreement_score":0.002851299,"about_ca_system_score_codex":0.0003071346,"about_ca_system_score_gemma":0.00023304673,"threshold_uncertainty_score":0.009538591},"labels":[],"label_agreement":null},{"id":"W2343417001","doi":"10.1021/acs.jmedchem.6b00211","title":"The Identification and Pharmacological Characterization of 6-( <i>tert</i> -Butylsulfonyl)- <i>N</i> -(5-fluoro-1 <i>H</i> -indazol-3-yl)quinolin-4-amine (GSK583), a Highly Potent and Selective Inhibitor of RIP2 Kinase","year":2016,"lang":"en","type":"article","venue":"Journal of Medicinal Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":124,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ryerson University; Northwestern University; GlaxoSmithKline","keywords":"Chemistry; NOD1; NOD2; Kinase; Innate immune system; Signal transduction; In vivo; Ex vivo; In vitro; Drug discovery; Cell biology; Receptor; Biochemistry; Biology","score_opus":0.00582530766602662,"score_gpt":0.22702823315245174,"score_spread":0.22120292548642512,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2343417001","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9764599,0.0066823447,0.008337857,0.00046698828,0.00007534034,0.0001830258,0.0011007063,0.00009950637,0.006594361],"genre_scores_gemma":[0.9875529,0.003424883,0.00485773,0.00018051678,0.000026013027,0.00008270282,0.0010709866,0.000013492806,0.0027906587],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999529,0.000007764054,0.000004565218,0.00000899379,0.000011087902,0.000014728766],"domain_scores_gemma":[0.9999609,0.0000067113474,0.000011366597,0.0000049934324,0.000005477574,0.000010614747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017562279,0.00027691142,0.00022326327,0.00011945587,0.00009715024,0.00017916218,0.00019375815,0.0002459825,0.0010478073],"category_scores_gemma":[0.00012688214,0.000074110154,0.00023099338,0.00009122002,0.00017146376,0.00018424832,0.00012083755,0.00045391635,0.0004803897],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000116609954,0.000055434455,0.000096807555,0.00006624298,0.0000065638374,0.00009536552,0.000013259808,0.00013022359,0.99560094,0.00017138722,0.00009676935,0.0035503437],"study_design_scores_gemma":[0.0001692682,0.0017175394,0.0026682313,0.000010018212,0.000030524538,0.00064294995,0.00001588987,0.0008468008,0.98923486,0.00013243218,0.004522607,0.000008917302],"about_ca_topic_score_codex":0.00027638944,"about_ca_topic_score_gemma":0.00054797187,"teacher_disagreement_score":0.0010478073,"about_ca_system_score_codex":0.00020918505,"about_ca_system_score_gemma":0.0002511116,"threshold_uncertainty_score":0.0035052896},"labels":[],"label_agreement":null},{"id":"W2347515328","doi":"","title":"Cloning of human soluble TRAIL cDNA and construction of its prokaryotic expression vector","year":2002,"lang":"en","type":"article","venue":"","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CAE (Canada)","funders":"","keywords":"Complementary DNA; pUC19; GenBank; Cloning (programming); Molecular biology; Biology; Expression vector; Molecular cloning; clone (Java method); Rapid amplification of cDNA ends; Vector (molecular biology); Sequence analysis; Recombinant DNA; Computational biology; Gene; Genetics; Computer science","score_opus":0.0226941033635844,"score_gpt":0.24065140278833203,"score_spread":0.21795729942474762,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2347515328","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7350686,0.015785333,0.20849162,0.0020581894,0.0013104131,0.002393591,0.020106822,0.0009795736,0.013805878],"genre_scores_gemma":[0.65325063,0.011672781,0.25249824,0.00038334244,0.00031970773,0.00088365696,0.048447166,0.00013926072,0.032405294],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997223,0.00003596313,0.00004141179,0.00004836858,0.00009751973,0.000054526943],"domain_scores_gemma":[0.9998778,0.000017732196,0.000017111714,0.00001344476,0.000038214854,0.00003552368],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002814611,0.00033336077,0.0005351933,0.00036879262,0.00036500773,0.0003757888,0.00022704314,0.00029910318,0.0022107426],"category_scores_gemma":[0.00022426128,0.00021288104,0.00033062836,0.0005719444,0.00021278,0.00021617746,0.00023543756,0.0007773597,0.0016145648],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002762112,0.00006476798,0.00034382092,0.00030909062,0.000008915748,0.00025553742,0.00007646875,0.0002854573,0.9862969,0.001572487,0.0005564953,0.0099537745],"study_design_scores_gemma":[0.00020361462,0.0008115417,0.00352192,0.00011028902,0.00008428961,0.0021799551,0.00011155703,0.0037497762,0.89161336,0.0008481682,0.09673417,0.000031283886],"about_ca_topic_score_codex":0.0005942981,"about_ca_topic_score_gemma":0.0007244439,"teacher_disagreement_score":0.0022107426,"about_ca_system_score_codex":0.00050376565,"about_ca_system_score_gemma":0.000661647,"threshold_uncertainty_score":0.007395625},"labels":[],"label_agreement":null},{"id":"W2398160834","doi":"10.1128/jvi.02557-15","title":"Lipopolysaccharide and Tumor Necrosis Factor Alpha Inhibit Interferon Signaling in Hepatocytes by Increasing Ubiquitin-Like Protease 18 (USP18) Expression","year":2016,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Western Hospital; University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research","keywords":"Biology; Tumor necrosis factor alpha; Innate immune system; Inflammation; ISG15; Immunology; Interferon; Downregulation and upregulation; Cancer research; Immune system; Ubiquitin","score_opus":0.013690233061187879,"score_gpt":0.24699357466703017,"score_spread":0.2333033416058423,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2398160834","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876481,0.0060623707,0.0042075315,0.00021709954,0.000094269715,0.000043256656,0.00040810788,0.00011020562,0.0012090309],"genre_scores_gemma":[0.9930744,0.00219685,0.0026740278,0.00007176014,0.000033933866,0.000047192552,0.00041138902,0.000014525403,0.0014757684],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999074,0.000019220108,0.000014355,0.0000140417105,0.000020048134,0.000025018166],"domain_scores_gemma":[0.99987197,0.000018786102,0.000058172074,0.000013998268,0.000012201743,0.000024908295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018078712,0.00038775898,0.00024285003,0.00011861083,0.00008867717,0.00022419737,0.000107922795,0.00019934424,0.001573306],"category_scores_gemma":[0.00009081902,0.00009156478,0.00028952528,0.00011046656,0.00026165965,0.00018384558,0.00015551233,0.00032846557,0.00041823735],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006376492,0.000060779803,0.00031363254,0.000098497236,0.000010552724,0.000056447374,0.0000102716085,0.00005697528,0.99606055,0.000086407774,0.00006289939,0.002545207],"study_design_scores_gemma":[0.00004584512,0.0006709298,0.002381129,0.000007586165,0.000015353908,0.00020020241,0.0000174864,0.0003220052,0.9944008,0.000039992698,0.0018954746,0.000003187044],"about_ca_topic_score_codex":0.00010194762,"about_ca_topic_score_gemma":0.00011979843,"teacher_disagreement_score":0.001573306,"about_ca_system_score_codex":0.00016577113,"about_ca_system_score_gemma":0.00012425154,"threshold_uncertainty_score":0.0052632093},"labels":[],"label_agreement":null},{"id":"W2401364428","doi":"10.1016/j.mcn.2005.01.005","title":"The molluscan RING-finger protein L-TRIM is essential for neuronal outgrowth","year":2005,"lang":"en","type":"article","venue":"Molecular and Cellular Neuroscience","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"","keywords":"Biology; Neurite; Trim; Cell biology; Messenger RNA; Regeneration (biology); In vitro; Genetics; Gene","score_opus":0.007962292837789356,"score_gpt":0.2277807790374479,"score_spread":0.21981848619965855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2401364428","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98527294,0.0025530648,0.0055824374,0.0002811544,0.00006231199,0.000014449399,0.0005999814,0.00046979502,0.0051638465],"genre_scores_gemma":[0.9914848,0.0005157737,0.0028568432,0.000083639534,0.000010512263,0.0000103734565,0.000781191,0.00006118901,0.004195651],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991024,0.000006859097,0.0000065359645,0.000019824945,0.000027291684,0.000029164803],"domain_scores_gemma":[0.9998072,0.000019391571,0.000055615066,0.000034942033,0.000029068307,0.000053752272],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000114667906,0.00018250316,0.00019214029,0.00017980755,0.000403231,0.000488338,0.00027840736,0.0003431539,0.0010446964],"category_scores_gemma":[0.00021837548,0.00017336883,0.0002098819,0.000103327126,0.0002557142,0.0003143612,0.00040798011,0.0005765191,0.0011581156],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011488007,0.000007919909,0.00057163305,0.00002543402,0.0000036101194,0.00011610019,0.000013759988,0.00008122324,0.99577194,0.00023695666,0.00024571613,0.0028108456],"study_design_scores_gemma":[0.000015064065,0.000061958475,0.02343044,0.000014625679,0.00001373083,0.0005406344,0.00009666979,0.0022960433,0.96749777,0.0003653046,0.005658006,0.000009781794],"about_ca_topic_score_codex":0.0017028068,"about_ca_topic_score_gemma":0.0043205796,"teacher_disagreement_score":0.0017028068,"about_ca_system_score_codex":0.0005821305,"about_ca_system_score_gemma":0.0003779352,"threshold_uncertainty_score":0.0042236447},"labels":[],"label_agreement":null},{"id":"W2405755467","doi":"10.1128/jvi.00186-16","title":"Herpes Simplex Virus 1 Serine Protease VP24 Blocks the DNA-Sensing Signal Pathway by Abrogating Activation of Interferon Regulatory Factor 3","year":2016,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":108,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Natural Science Foundation of China","keywords":"Biology; Serine protease; Interferon regulatory factors; Herpes simplex virus; Virology; Interferon; NS3; Protease; IRF3; Virus; Enzyme; Innate immune system; Immunology; Biochemistry; Immune system","score_opus":0.012516651764008513,"score_gpt":0.23843597259446375,"score_spread":0.22591932083045524,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2405755467","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99139553,0.0047927126,0.0019211159,0.0001051413,0.00007952255,0.000030356128,0.00024190397,0.00011265706,0.0013210312],"genre_scores_gemma":[0.995285,0.0015309034,0.001377509,0.00003206053,0.000021020272,0.000032397264,0.00034088324,0.000017891161,0.001362436],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990284,0.000019198258,0.000012040745,0.000015057479,0.000022128059,0.000028652279],"domain_scores_gemma":[0.9999337,0.000017396931,0.000022897952,0.000008363249,0.000005335041,0.000012289747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009610443,0.00042454008,0.0002426517,0.0001292614,0.00010112048,0.00023914517,0.00028521838,0.00021533179,0.0016190677],"category_scores_gemma":[0.00010833131,0.000072033916,0.00021342613,0.00009633657,0.00025156356,0.00019180788,0.00012050614,0.00044138817,0.00031997476],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024127323,0.00004232113,0.00007052563,0.000060209055,0.0000082370325,0.00004656133,0.0000060669154,0.00007194729,0.99767274,0.000120017125,0.00005139473,0.0016086799],"study_design_scores_gemma":[0.000023563623,0.0003682394,0.0007064299,0.0000048621,0.000010696278,0.00021940548,0.0000075080084,0.00037535655,0.99593914,0.00003965937,0.002302639,0.000002606563],"about_ca_topic_score_codex":0.00016585081,"about_ca_topic_score_gemma":0.00011851022,"teacher_disagreement_score":0.0016190677,"about_ca_system_score_codex":0.00021361976,"about_ca_system_score_gemma":0.0001641828,"threshold_uncertainty_score":0.0054163337},"labels":[],"label_agreement":null},{"id":"W2412098581","doi":"10.1128/jvi.01593-15","title":"Duck Interferon-Inducible Transmembrane Protein 3 Mediates Restriction of Influenza Viruses","year":2015,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Government of Canada","keywords":"Biology; Virology; Transmembrane protein; Interferon; Antiviral protein; Influenza A virus; H5N1 genetic structure; Virus; Genetics; Coronavirus disease 2019 (COVID-19); Gene; RNA; Infectious disease (medical specialty); Receptor","score_opus":0.05342104264514572,"score_gpt":0.29947798177686796,"score_spread":0.24605693913172225,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412098581","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941755,0.00089122145,0.002063109,0.00011131666,0.00003384176,0.000018301655,0.0007153777,0.00007337632,0.0019179374],"genre_scores_gemma":[0.99212486,0.00029106098,0.0030664762,0.00006950629,0.000009013996,0.000026039419,0.0013190447,0.000026171017,0.0030678834],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998791,0.000016804579,0.000010939204,0.00003714935,0.000023495048,0.00003245163],"domain_scores_gemma":[0.9998733,0.000024502617,0.000040825176,0.000017674814,0.000015803671,0.000027816837],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009807985,0.00033662052,0.00015331806,0.00006219955,0.00018141567,0.00019524586,0.00017068404,0.0002844927,0.0016451582],"category_scores_gemma":[0.00008378812,0.0000692711,0.00024407265,0.000059188562,0.00020138669,0.00012079422,0.00019430873,0.00036109227,0.000790326],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006105388,0.0000074348914,0.00026433205,0.000030362244,0.0000014710118,0.000035645233,0.000009021822,0.000022181124,0.9990922,0.000034660054,0.0000373447,0.00040422365],"study_design_scores_gemma":[0.000012501865,0.0001296756,0.013188739,0.000013160023,0.0000105801555,0.0005521105,0.000053226624,0.0007931576,0.9806753,0.00003646617,0.004531593,0.0000035390547],"about_ca_topic_score_codex":0.00070784835,"about_ca_topic_score_gemma":0.0011114241,"teacher_disagreement_score":0.0016451582,"about_ca_system_score_codex":0.00059248885,"about_ca_system_score_gemma":0.00019444161,"threshold_uncertainty_score":0.005503595},"labels":[],"label_agreement":null},{"id":"W2417724913","doi":"10.1371/journal.pone.0156739","title":"Nonhuman Primate IFITM Proteins Are Potent Inhibitors of HIV and SIV","year":2016,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Primate; Nonhuman primate; Virology; Infectivity; Non human primate; Simian immunodeficiency virus; Virus; Macaca nemestrina; Viral replication; Macaque; Lentivirus; Viral disease; Neuroscience; Evolutionary biology","score_opus":0.023452680777696463,"score_gpt":0.2127543729227199,"score_spread":0.18930169214502343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417724913","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9608956,0.021730434,0.010867059,0.00028183576,0.000061610124,0.0001676402,0.0010425946,0.00013165749,0.004821543],"genre_scores_gemma":[0.9539354,0.009340412,0.025002312,0.000235508,0.0000868004,0.00021057918,0.005022374,0.00004375275,0.0061228755],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983764,0.00003563154,0.000012381286,0.000027015736,0.00005164107,0.00003569647],"domain_scores_gemma":[0.999892,0.000026700254,0.000031046948,0.000015343609,0.000014039915,0.00002084332],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025843282,0.00038118416,0.00025912686,0.00025703904,0.00021156236,0.00021125496,0.0001741774,0.00026611227,0.0015212594],"category_scores_gemma":[0.0002079499,0.00008772407,0.00035540338,0.00018371853,0.0001580165,0.00015280025,0.00015417347,0.00042381932,0.00040305484],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000101234255,0.000037200825,0.0005796324,0.00008064567,0.000010328699,0.000100330784,0.000020693375,0.00007793794,0.99055684,0.00018896478,0.00015752489,0.008088675],"study_design_scores_gemma":[0.000020998303,0.00078731996,0.0106273005,0.000022395614,0.000031805706,0.0019781825,0.000032945896,0.00037017718,0.961904,0.00019040394,0.024025533,0.000008981749],"about_ca_topic_score_codex":0.0002539752,"about_ca_topic_score_gemma":0.0005635711,"teacher_disagreement_score":0.0015212594,"about_ca_system_score_codex":0.00017986329,"about_ca_system_score_gemma":0.00018744805,"threshold_uncertainty_score":0.005089104},"labels":[],"label_agreement":null},{"id":"W2422294165","doi":"10.1093/neuonc/now067.33","title":"PNR-39DISTINCT GENE FUSIONS SEGREGATE SUB-CLASSES OF CNS-PNETs","year":2016,"lang":"en","type":"article","venue":"Neuro-Oncology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; Children's Hospital of Eastern Ontario; Hospital for Sick Children","funders":"","keywords":"Computational biology; Gene; Biology; Evolutionary biology; Genetics; Neuroscience; Computer science","score_opus":0.019205406672762732,"score_gpt":0.2719143811960665,"score_spread":0.25270897452330376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2422294165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983802,0.00011023165,0.00044651356,0.000007622329,0.0000023872244,0.000013358927,0.00037891214,0.000021529322,0.00063935237],"genre_scores_gemma":[0.99772674,0.00011948627,0.00042132876,0.000015200917,0.0000021614308,0.000021191147,0.0009421643,0.000017211496,0.00073454867],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983346,0.000008695864,0.0000149173675,0.000053515996,0.00005597645,0.000033430864],"domain_scores_gemma":[0.99985194,0.000029385608,0.00005897089,0.0000143310335,0.000012699401,0.00003255061],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007895472,0.0001687343,0.00020141684,0.00079756585,0.000115947645,0.00016373489,0.00014014456,0.00016651888,0.0015096817],"category_scores_gemma":[0.00023503383,0.00009688001,0.0002174824,0.00027224934,0.0002213193,0.000103129954,0.0002959653,0.00021296815,0.0003476317],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044069454,0.000030717518,0.04963835,0.000025851723,0.000048201393,0.0011860188,0.000118066564,0.00016956958,0.9433534,0.00019937144,0.0001021818,0.0046875267],"study_design_scores_gemma":[0.00002392107,0.00026804907,0.8729928,0.000008435371,0.0000755497,0.013040144,0.0002092248,0.0012129536,0.11005354,0.00038257983,0.0017156752,0.000017124712],"about_ca_topic_score_codex":0.000741272,"about_ca_topic_score_gemma":0.0016385706,"teacher_disagreement_score":0.0015096817,"about_ca_system_score_codex":0.00018454404,"about_ca_system_score_gemma":0.0001138867,"threshold_uncertainty_score":0.0050504208},"labels":[],"label_agreement":null},{"id":"W24266920","doi":"10.1177/135965350801300306","title":"Distinct Signature Type I Interferon Responses are Determined by the Infecting virus and the Target Cell","year":2008,"lang":"en","type":"article","venue":"Antiviral Therapy","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Biology; Interferon; Sendai virus; Virus; Virology; Gene; Gene expression; Interferon-stimulated gene; Immunology; Immune system; Innate immune system; Genetics","score_opus":0.016249503477538205,"score_gpt":0.2440967339733823,"score_spread":0.2278472304958441,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W24266920","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918892,0.0017896312,0.0038393987,0.000049672522,0.000028558285,0.00004898565,0.00029408914,0.000038833005,0.0020216007],"genre_scores_gemma":[0.9914175,0.0016141268,0.004675141,0.000081102226,0.00003328927,0.00012696079,0.00060747087,0.00002730277,0.0014170249],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99961746,0.000083135164,0.0000400463,0.000085037864,0.00010638029,0.00006793642],"domain_scores_gemma":[0.999592,0.0001598105,0.00006752813,0.00004617891,0.00006163207,0.00007287077],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041832527,0.00031346342,0.00039908467,0.00026317485,0.00015999979,0.00061593135,0.0001877541,0.00042673756,0.0011297221],"category_scores_gemma":[0.00045218912,0.00021864258,0.00026837637,0.0001788785,0.00031311275,0.00045936,0.00028845432,0.0005260399,0.00082691055],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001270593,0.00001475774,0.0016010213,0.000028763712,0.0000028194231,0.000042244086,0.000022138258,0.000025939004,0.99702543,0.00009963788,0.00001283447,0.0009972564],"study_design_scores_gemma":[0.000031359898,0.0011031895,0.08937737,0.00005296863,0.000048463768,0.0014250271,0.000335789,0.001249748,0.9028109,0.0003485284,0.003193394,0.000023362332],"about_ca_topic_score_codex":0.00012935375,"about_ca_topic_score_gemma":0.0001857027,"teacher_disagreement_score":0.0011297221,"about_ca_system_score_codex":0.0002669618,"about_ca_system_score_gemma":0.00023208217,"threshold_uncertainty_score":0.003779292},"labels":[],"label_agreement":null},{"id":"W2473975111","doi":"10.1016/j.virol.2016.06.021","title":"Vimentin plays a role in the release of the influenza A viral genome from endosomes","year":2016,"lang":"en","type":"article","venue":"Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Endosome; Vimentin; Biology; Cell biology; Virus; Virology; Cytoplasm; Influenza A virus; Microtubule; Immunology","score_opus":0.008036329459059887,"score_gpt":0.21843399969722763,"score_spread":0.21039767023816774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2473975111","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9571551,0.01783928,0.012256357,0.0007159546,0.00017142367,0.00004372177,0.00027804408,0.0001236953,0.011416497],"genre_scores_gemma":[0.99287146,0.0023750141,0.0016595963,0.0000537843,0.000027880613,0.000007874129,0.0001285686,0.000011181664,0.0028645664],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986315,0.000032145894,0.000008465757,0.00002479966,0.000025449679,0.000045939574],"domain_scores_gemma":[0.99984133,0.000043105032,0.000028276303,0.000012322387,0.000028989374,0.000045968987],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024619506,0.00029492506,0.00016467998,0.00029053594,0.0005216331,0.000546107,0.00025129697,0.00061032234,0.001375289],"category_scores_gemma":[0.00024542797,0.00015990675,0.00029828958,0.0001020156,0.00041315658,0.0005202229,0.0003131375,0.00041352795,0.0006367742],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005278569,0.000025327237,0.0010910634,0.00012226673,0.000014096878,0.00041005597,0.000069228765,0.000110034234,0.9921739,0.0017639644,0.0001497859,0.0035425476],"study_design_scores_gemma":[0.00003416618,0.00036986056,0.035311736,0.00005424391,0.000051906514,0.0015475289,0.00041538264,0.0025918952,0.9496773,0.0012496938,0.008675206,0.00002111246],"about_ca_topic_score_codex":0.0008585635,"about_ca_topic_score_gemma":0.0011229428,"teacher_disagreement_score":0.001375289,"about_ca_system_score_codex":0.0004994306,"about_ca_system_score_gemma":0.0002276959,"threshold_uncertainty_score":0.004600823},"labels":[],"label_agreement":null},{"id":"W2480010240","doi":"10.1016/j.dci.2016.07.011","title":"Fish interferon-stimulated genes: The antiviral effectors","year":2016,"lang":"en","type":"review","venue":"Developmental & Comparative Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":65,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Innate immune system; Interferon; Effector; Virology; Viral replication; Gene; Immunity; Virus; Immunology; Immune system; Genetics","score_opus":0.05681187374316576,"score_gpt":0.33846909898478067,"score_spread":0.2816572252416149,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2480010240","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00019884709,0.99595094,0.0003390766,0.0005402408,0.0006499229,0.0000037852221,0.000040946303,0.000013223194,0.0022629858],"genre_scores_gemma":[0.0012623274,0.99453,0.00031498185,0.00042469866,0.00057659927,0.000007402558,0.000090388516,0.0000039381407,0.0027898],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998492,0.000013734327,0.00002069398,0.00003620702,0.000057084646,0.000022990233],"domain_scores_gemma":[0.99973744,0.00008092645,0.000059997023,0.000009999332,0.000064397245,0.000047333357],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005716526,0.000945706,0.0010681953,0.0013892362,0.00025247975,0.0013447835,0.00094410084,0.0012384994,0.004171296],"category_scores_gemma":[0.0005720709,0.00033476495,0.00025696357,0.0019492509,0.0010232828,0.0017758599,0.0010670847,0.0018224542,0.002830926],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010020406,0.000025122883,0.00021146947,0.0049411403,0.000032157426,0.00015584916,0.000060822,0.00028964272,0.007024656,0.005949551,0.030184466,0.9510249],"study_design_scores_gemma":[0.0000067158026,0.000025748404,0.00051304995,0.000784969,0.000033560667,0.00043683394,0.000049092483,0.000050590017,0.0009712917,0.0018751228,0.9952409,0.000012155066],"about_ca_topic_score_codex":0.0008320612,"about_ca_topic_score_gemma":0.0014956953,"teacher_disagreement_score":0.004171296,"about_ca_system_score_codex":0.00096050894,"about_ca_system_score_gemma":0.0013820588,"threshold_uncertainty_score":0.013954341},"labels":[],"label_agreement":null},{"id":"W2484358566","doi":"10.1371/journal.ppat.1005764","title":"Deubiquitinase USP2a Sustains Interferons Antiviral Activity by Restricting Ubiquitination of Activated STAT1 in the Nucleus","year":2016,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Program for Changjiang Scholars and Innovative Research Team in University; Priority Academic Program Development of Jiangsu Higher Education Institutions; Innovative Team of Jiangsu Province; Ministry of Education of the People's Republic of China; National Natural Science Foundation of China; McGill University; Shandong University; Soochow University; University of Pennsylvania","keywords":"STAT1; Deubiquitinating enzyme; Ubiquitin; Phosphorylation; Cell biology; Transcription factor; Biology; Signal transduction; Downregulation and upregulation; Cancer research; Chemistry; Biochemistry; Gene","score_opus":0.01707611380664288,"score_gpt":0.24958700893586427,"score_spread":0.2325108951292214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2484358566","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98835456,0.0043646935,0.004683731,0.00012281256,0.000043626518,0.000019891537,0.00045157087,0.0001445993,0.0018143927],"genre_scores_gemma":[0.99489623,0.0011827652,0.0018305196,0.000036898284,0.000013309466,0.000014577969,0.00041701586,0.000017927685,0.0015907699],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998703,0.000020044774,0.000015069012,0.000032018106,0.000031881787,0.000030805495],"domain_scores_gemma":[0.99991727,0.000009290713,0.000023552975,0.00001813999,0.0000096064605,0.00002207846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001875741,0.0002730544,0.00031013114,0.00020503251,0.00017724874,0.000306992,0.00015247277,0.00018946921,0.0008027917],"category_scores_gemma":[0.00009627347,0.00011811523,0.00027390913,0.00013281022,0.00020661407,0.00017901158,0.00019636849,0.0002946263,0.0002930265],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013049915,0.000020996134,0.00035930192,0.000040721523,0.0000090599815,0.000035478402,0.0000068345043,0.0000683675,0.9964296,0.00013641635,0.00007009326,0.0026927262],"study_design_scores_gemma":[0.00002097764,0.00016507685,0.003657022,0.0000059625754,0.000014827982,0.0002952652,0.000015085496,0.0012397914,0.99037385,0.000096305455,0.004111402,0.0000044326453],"about_ca_topic_score_codex":0.000323521,"about_ca_topic_score_gemma":0.0005958419,"teacher_disagreement_score":0.0008027917,"about_ca_system_score_codex":0.00028410295,"about_ca_system_score_gemma":0.00024046283,"threshold_uncertainty_score":0.0026856065},"labels":[],"label_agreement":null},{"id":"W2487837263","doi":"10.1371/journal.pone.0160529","title":"IRF1 Downregulation by Ras/MEK Is Independent of Translational Control of IRF1 mRNA","year":2016,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Canadian Institutes of Health Research; Cure Brain Cancer Foundation; Research and Development Corporation of Newfoundland and Labrador; Canadian Cancer Society","keywords":"IRF1; Downregulation and upregulation; Polysome; Cell biology; Biology; Messenger RNA; Chemistry; Molecular biology; Cancer research; Gene expression; Biochemistry; Ribosome; Gene","score_opus":0.01805420728276257,"score_gpt":0.21173298015825412,"score_spread":0.19367877287549154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2487837263","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947233,0.0012927876,0.0019761198,0.00007373932,0.000027838472,0.000018240398,0.00042577795,0.00011268691,0.0013495574],"genre_scores_gemma":[0.99468863,0.0006726084,0.0018766111,0.000024298668,0.00001335961,0.000027040433,0.0006065972,0.000035848283,0.0020549563],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998325,0.000018349587,0.000016096836,0.00003782784,0.000049858892,0.00004539072],"domain_scores_gemma":[0.99986136,0.000028519911,0.000038883558,0.000026081965,0.00002316389,0.000022074615],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012523071,0.00046292294,0.00027017065,0.00024105186,0.00020964649,0.00025251348,0.0001979721,0.0001854272,0.0016922439],"category_scores_gemma":[0.0001208349,0.00016123187,0.00041055298,0.00009076906,0.0002444928,0.0001617667,0.00018358997,0.000571927,0.000708124],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000064560365,0.000008614487,0.00009781608,0.000018825767,0.0000015121008,0.000014343773,0.000005823109,0.000013520295,0.9992768,0.00003982801,0.000011038112,0.0004472459],"study_design_scores_gemma":[0.000004370021,0.000090271446,0.0040152892,0.000002954241,0.0000062468735,0.00010391776,0.000012408307,0.00030378616,0.9947472,0.000024891358,0.0006861146,0.0000024809653],"about_ca_topic_score_codex":0.00044930153,"about_ca_topic_score_gemma":0.00074277964,"teacher_disagreement_score":0.0016922439,"about_ca_system_score_codex":0.0003052197,"about_ca_system_score_gemma":0.0001847636,"threshold_uncertainty_score":0.0056610703},"labels":[],"label_agreement":null},{"id":"W2494833949","doi":"10.1016/j.gene.2016.08.010","title":"Response of the JAK-STAT signaling pathway to oxygen deprivation in the red eared slider turtle, Trachemys scripta elegans","year":2016,"lang":"en","type":"article","venue":"Gene","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Turtle (robot); stat; JAK-STAT signaling pathway; Signal transduction; Cell biology; Phosphorylation; Ecology","score_opus":0.018400044338934947,"score_gpt":0.23279405131491157,"score_spread":0.21439400697597663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2494833949","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991866,0.00015952616,0.00012363947,0.000046990906,0.000013154985,0.0000032265298,0.00020245327,0.000014982343,0.0002493861],"genre_scores_gemma":[0.99795026,0.00009775845,0.00013285478,0.00005515978,0.0000040206146,0.000009364574,0.0002863122,0.000009874882,0.0014544112],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991167,0.000007783617,0.0000068491186,0.00002311624,0.000017062248,0.00003354929],"domain_scores_gemma":[0.99989784,0.000016760016,0.000028776103,0.000008754673,0.000009051565,0.000038867027],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000070377646,0.00026767544,0.00017876783,0.000173662,0.00015182701,0.00019467201,0.0001903832,0.00027701783,0.0011156789],"category_scores_gemma":[0.000096353935,0.00015562863,0.0002586152,0.000049951672,0.000317277,0.00015901512,0.00022729656,0.0006875136,0.00014339831],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002648051,0.00002081257,0.00043619072,0.000017264283,0.0000035366168,0.00006215263,0.000014639506,0.000045789337,0.998774,0.000034092256,0.00003262837,0.00029395233],"study_design_scores_gemma":[0.00006872561,0.00077787664,0.11585131,0.000017728658,0.000051875828,0.0003085784,0.00029612155,0.003048541,0.8784075,0.00012290567,0.0010238282,0.000025127412],"about_ca_topic_score_codex":0.0021157234,"about_ca_topic_score_gemma":0.0038455692,"teacher_disagreement_score":0.0021157234,"about_ca_system_score_codex":0.00035320266,"about_ca_system_score_gemma":0.00018720225,"threshold_uncertainty_score":0.004206836},"labels":[],"label_agreement":null},{"id":"W2500471657","doi":"10.4049/jimmunol.1600332","title":"The Minor MHC Class I Gene <i>UDA</i> of Ducks Is Regulated by Let-7 MicroRNA","year":2016,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; MHC class I; Genetics; Gene; Promoter; Major histocompatibility complex; Transporter associated with antigen processing; Molecular biology; Gene expression","score_opus":0.006934713330064442,"score_gpt":0.21564249562662613,"score_spread":0.2087077822965617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2500471657","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99362636,0.0009839002,0.003226452,0.000051877694,0.00003612588,0.0000096821295,0.00039479003,0.0001367494,0.0015340678],"genre_scores_gemma":[0.99324256,0.00026095455,0.002245382,0.00005072081,0.000006555256,0.0000152520115,0.00052224693,0.000044994937,0.0036113237],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998859,0.000010856301,0.000011255099,0.000047784994,0.000025843154,0.00001838802],"domain_scores_gemma":[0.99985826,0.000024542003,0.000054599608,0.000010642402,0.000020031555,0.00003187858],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000060954015,0.00023974676,0.00016881058,0.00014417763,0.00019928685,0.00035128772,0.00011411585,0.00014884942,0.00061443564],"category_scores_gemma":[0.000110407476,0.00014291672,0.00019645333,0.00005245917,0.00018863821,0.00010696107,0.00016515344,0.00031712672,0.0003487507],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027925002,0.0000028252541,0.0006040029,0.0000123258305,0.0000020530942,0.000042653577,0.000024151523,0.000021596763,0.9984168,0.000045983455,0.000025229916,0.00077436183],"study_design_scores_gemma":[0.000004866742,0.000117349686,0.04968052,0.000010815539,0.000020367324,0.0004324197,0.0001086494,0.001443565,0.94280916,0.000043409906,0.0053194645,0.000009380945],"about_ca_topic_score_codex":0.0021026626,"about_ca_topic_score_gemma":0.0024172463,"teacher_disagreement_score":0.0021026626,"about_ca_system_score_codex":0.00037554742,"about_ca_system_score_gemma":0.00015586728,"threshold_uncertainty_score":0.0041808486},"labels":[],"label_agreement":null},{"id":"W2505439876","doi":"10.1371/journal.ppat.1005772","title":"Spliceosome SNRNP200 Promotes Viral RNA Sensing and IRF3 Activation of Antiviral Response","year":2016,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research; Canadian Liver Foundation; Foundation Fighting Blindness","keywords":"RNA Helicase A; RIG-I; Small nuclear RNA; RNA; Gene knockdown; Biology; Spliceosome; RNA-dependent RNA polymerase; Virology; RNA silencing; Sendai virus; Cell biology; IRF3; Helicase; RNA splicing; RNA interference; Virus; Gene; Genetics; Transcription factor","score_opus":0.01520897043279391,"score_gpt":0.2316488341016121,"score_spread":0.2164398636688182,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2505439876","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99821484,0.00029372057,0.00065283926,0.000030841016,0.0000072749235,0.0000037304876,0.00008703594,0.00004009042,0.0006695499],"genre_scores_gemma":[0.9990119,0.00007116495,0.00023181312,0.000011110011,0.0000027217632,0.0000029763235,0.00010493753,0.0000052952546,0.0005580035],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999324,0.000010638037,0.000006440633,0.000013963912,0.000016369995,0.000020258845],"domain_scores_gemma":[0.99994385,0.0000044418102,0.000017210965,0.0000053776566,0.0000063143857,0.000022883405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007386336,0.00021708444,0.00014377633,0.00011032129,0.00011059989,0.0002000602,0.000072186296,0.00016594557,0.0016186191],"category_scores_gemma":[0.000067570654,0.0000767465,0.0001940203,0.000047551504,0.00013383872,0.00010536846,0.00017650683,0.00025928032,0.00038156298],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012587808,0.000008197814,0.0008954506,0.000011828259,0.000002210213,0.000116965944,0.000010365795,0.000019842506,0.99798346,0.00004874699,0.000024662273,0.00075237104],"study_design_scores_gemma":[0.00001841155,0.00024841755,0.030220719,0.00000801034,0.000015813126,0.0015304416,0.00007793863,0.0009345473,0.96524864,0.00015410892,0.0015384211,0.000004618625],"about_ca_topic_score_codex":0.00020503877,"about_ca_topic_score_gemma":0.00027718692,"teacher_disagreement_score":0.0016186191,"about_ca_system_score_codex":0.00015993266,"about_ca_system_score_gemma":0.00008912469,"threshold_uncertainty_score":0.0054148436},"labels":[],"label_agreement":null},{"id":"W2507778752","doi":"10.1186/s12977-016-0302-9","title":"Type I interferon responses are impaired in latently HIV infected cells","year":2016,"lang":"en","type":"article","venue":"Retrovirology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"International AIDS Society; Canadian Institutes of Health Research; University of Ottawa; Canadian Foundation for AIDS Research","keywords":"Medicine; Human immunodeficiency virus (HIV); Interferon; Virology; Antibody; Immunology","score_opus":0.013819626628642641,"score_gpt":0.23580510810898592,"score_spread":0.22198548148034328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2507778752","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99634475,0.0012477937,0.001258896,0.000039336406,0.000017945535,0.000015252432,0.00038455133,0.000045401317,0.00064600667],"genre_scores_gemma":[0.996678,0.00075923826,0.00088264514,0.000038478964,0.000010247322,0.000035044784,0.0007578797,0.000010851886,0.0008276831],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979395,0.00002591842,0.000031285985,0.000033780565,0.00005945496,0.000055714554],"domain_scores_gemma":[0.9997501,0.00005284384,0.00008052038,0.00004618713,0.000026652431,0.000043616063],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014677909,0.0002669048,0.00025073695,0.00016676834,0.00013771595,0.0005514759,0.00016650443,0.00027785898,0.0013803921],"category_scores_gemma":[0.00017606141,0.00009295152,0.00018964236,0.00016898758,0.00018491199,0.00026809584,0.00020717371,0.0005980506,0.0005337493],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009980849,0.000021421065,0.0006465259,0.000026995427,0.0000022116465,0.00005224917,0.000022358621,0.000012157689,0.99836403,0.000035308814,0.000018142862,0.00069860864],"study_design_scores_gemma":[0.000018951403,0.0006532905,0.029539958,0.000021609625,0.000022349448,0.0009192288,0.00017705424,0.000399924,0.96625495,0.00012246214,0.001863546,0.0000066496445],"about_ca_topic_score_codex":0.00026553468,"about_ca_topic_score_gemma":0.00023327972,"teacher_disagreement_score":0.0013803921,"about_ca_system_score_codex":0.00021851857,"about_ca_system_score_gemma":0.00013862806,"threshold_uncertainty_score":0.00461787},"labels":[],"label_agreement":null},{"id":"W2511294319","doi":"10.1159/000447832","title":"RAIDD Mediates TLR3 and IRF7 Driven Type I Interferon Production","year":2016,"lang":"en","type":"article","venue":"Cellular Physiology and Biochemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Ontario Institute for Cancer Research","funders":"Fonds National de la Recherche Luxembourg; Alexander von Humboldt-Stiftung","keywords":"IRF7; Interferon regulatory factors; Interferon; IRF3; Cell biology; Innate immune system; IκB kinase; Biology; Signal transduction; Gene knockdown; IRF1; FADD; Interferon type I; NF-κB; Transcription factor; Immune system; Virology; Immunology; Programmed cell death; Apoptosis; Caspase; Biochemistry","score_opus":0.006739443979933146,"score_gpt":0.2026910762264502,"score_spread":0.19595163224651704,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2511294319","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97873926,0.0038234587,0.010681517,0.0003031196,0.00010328528,0.000069853406,0.0016566167,0.00020526336,0.0044176443],"genre_scores_gemma":[0.98834723,0.0009186412,0.00460254,0.00008381803,0.00002110627,0.00007454311,0.0022223755,0.000029094728,0.0037006435],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997521,0.000031643518,0.000024576262,0.000055702658,0.00006632972,0.00006963549],"domain_scores_gemma":[0.9998838,0.000017350267,0.000033870994,0.00002153612,0.000019357672,0.000024112871],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021182779,0.00046876643,0.00022407321,0.00020719526,0.00023297632,0.0003961044,0.00028101733,0.00034286044,0.0028925957],"category_scores_gemma":[0.00012124115,0.00016593274,0.0005200893,0.00009975675,0.00026285512,0.00019397348,0.00036343068,0.0007273389,0.0016907179],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008770173,0.00001730796,0.00018392655,0.000050518916,0.000003340375,0.00004001184,0.0000065861286,0.000026984051,0.9989316,0.00007753554,0.000045141966,0.0005293736],"study_design_scores_gemma":[0.000020241001,0.000081945254,0.0030094543,0.000008561495,0.0000089722835,0.0003173553,0.000023304003,0.0007474326,0.9937483,0.000058199064,0.0019726483,0.000003526057],"about_ca_topic_score_codex":0.00023826826,"about_ca_topic_score_gemma":0.0002982546,"teacher_disagreement_score":0.0028925957,"about_ca_system_score_codex":0.00051996484,"about_ca_system_score_gemma":0.00029058108,"threshold_uncertainty_score":0.009676635},"labels":[],"label_agreement":null},{"id":"W2512229439","doi":"10.1074/jbc.m116.728964","title":"DUSP1 Maintains IRF1 and Leads to Increased Expression of IRF1-dependent Genes","year":2016,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Alberta Innovates; GlaxoSmithKline; AstraZeneca","keywords":"IRF1; Gene silencing; Cell biology; Biology; Molecular biology; A549 cell; Regulation of gene expression; Gene expression; Chemistry; Biochemistry; Gene; Cell","score_opus":0.016742657744544077,"score_gpt":0.2508958631401577,"score_spread":0.23415320539561363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2512229439","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99086833,0.003166549,0.0031411918,0.00018493079,0.00006659807,0.000025596093,0.000966709,0.00015025708,0.0014298994],"genre_scores_gemma":[0.99338454,0.00083680276,0.0019852412,0.00008168045,0.000013329174,0.00003362177,0.0013873135,0.000031082243,0.0022464516],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997414,0.000027934488,0.000025268593,0.00007558485,0.00005310922,0.00007666992],"domain_scores_gemma":[0.99986315,0.000016581598,0.000036426558,0.000024034502,0.000020531385,0.000039248658],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018724118,0.0004229266,0.00034853845,0.00021562702,0.0002459309,0.00032746844,0.00021661654,0.00030769026,0.0015841111],"category_scores_gemma":[0.000120418044,0.0002171161,0.00039858354,0.00017991732,0.0002569344,0.00024069657,0.00025476777,0.00096118904,0.000467312],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004826788,0.000015666954,0.00008762952,0.000027024413,0.0000022596812,0.000016698998,0.000009824627,0.000030989315,0.9989557,0.000042058018,0.000039307317,0.0007245871],"study_design_scores_gemma":[0.00000829466,0.00013830524,0.0028180508,0.0000052801597,0.000007688363,0.00012388961,0.000027271213,0.0006226271,0.99347067,0.00003134638,0.0027431906,0.000003417601],"about_ca_topic_score_codex":0.00071346515,"about_ca_topic_score_gemma":0.0010038265,"teacher_disagreement_score":0.0015841111,"about_ca_system_score_codex":0.0004384966,"about_ca_system_score_gemma":0.00022086459,"threshold_uncertainty_score":0.0052993894},"labels":[],"label_agreement":null},{"id":"W2516449150","doi":"10.1111/cmi.12660","title":"Type I interferon promotes cell-to-cell spread of<i>Listeria monocytogenes</i>","year":2016,"lang":"en","type":"article","venue":"Cellular Microbiology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University of Toronto; Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"Biology; Listeria monocytogenes; Intracellular parasite; Interferon; Microbiology; Immune system; Interferon type I; Listeria; Intracellular; Cytosol; Cell type; Cell; Cell biology; Bacteria; Virology; Immunology; Genetics","score_opus":0.014918151928256752,"score_gpt":0.22753668709884334,"score_spread":0.2126185351705866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2516449150","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916786,0.0019176406,0.002132878,0.00019375741,0.00005299508,0.000009471305,0.00013713472,0.000084294225,0.0037933597],"genre_scores_gemma":[0.99577135,0.0007117962,0.0011400975,0.000077914265,0.000024708204,0.000008685954,0.00015800372,0.000020207988,0.0020872399],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999155,0.000019043682,0.0000061201663,0.000014358732,0.000015481255,0.00002953884],"domain_scores_gemma":[0.99990714,0.000016637483,0.000028518742,0.000012826325,0.000013800143,0.000021053744],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012589233,0.00025871978,0.00014506045,0.00013808387,0.000095588766,0.00024602,0.00007434367,0.00017769854,0.001290378],"category_scores_gemma":[0.000078154095,0.000078130324,0.00019435282,0.000056124616,0.00012330436,0.00012244178,0.00019260269,0.00045958027,0.000537113],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000979514,0.000016229578,0.00023457443,0.000019976891,0.0000015602199,0.000029092216,0.00000755947,0.000019677196,0.9984524,0.000069202724,0.000055963777,0.0009957423],"study_design_scores_gemma":[0.00002535282,0.00033687134,0.007045991,0.000018420082,0.000013379174,0.00027385593,0.000050572133,0.000716731,0.988791,0.000117546064,0.002606973,0.00000329365],"about_ca_topic_score_codex":0.00016717306,"about_ca_topic_score_gemma":0.0002450826,"teacher_disagreement_score":0.001290378,"about_ca_system_score_codex":0.00016555472,"about_ca_system_score_gemma":0.00011899204,"threshold_uncertainty_score":0.004316747},"labels":[],"label_agreement":null},{"id":"W2517466029","doi":"10.15252/embr.201642771","title":"Natural mutations in IFITM3 modulate post‐translational regulation and toggle antiviral specificity","year":2016,"lang":"en","type":"article","venue":"EMBO Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":114,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Agence Nationale de la Recherche; Agence Nationale de Recherches sur le Sida et les Hépatites Virales; National Cancer Institute; Sidaction; Styrelsen för Internationellt Utvecklingssamarbete; Pasteur Foundation","keywords":"Biology; Gene duplication; Antiviral protein; Gene; Virus; Viral envelope; Virology; Genetics; RNA","score_opus":0.009172336184389474,"score_gpt":0.23790332096093883,"score_spread":0.22873098477654935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2517466029","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967655,0.00041737882,0.0012887267,0.0001699312,0.000058601392,0.000013326692,0.00018295592,0.000103376115,0.0010002361],"genre_scores_gemma":[0.99874973,0.0000735391,0.0005182,0.000060938204,0.000006427656,0.000010503718,0.000091539296,0.00003269252,0.0004564833],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998472,0.00003313619,0.000017173723,0.000028239765,0.000028455144,0.000045744255],"domain_scores_gemma":[0.9997677,0.00005490607,0.0000827115,0.000033700104,0.0000124713115,0.00004841259],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018954746,0.00028053095,0.0001758391,0.00012849027,0.0002147071,0.0003255668,0.00029558517,0.00048417225,0.0029197063],"category_scores_gemma":[0.0003118927,0.000131435,0.00028838668,0.00009246124,0.0004489911,0.00023369466,0.0002879751,0.00089589646,0.00077802927],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021005434,0.00001980118,0.00020602492,0.000010601709,0.0000055847268,0.00006399871,0.000007403819,0.000094882824,0.9984041,0.00021223022,0.000064716805,0.00070064235],"study_design_scores_gemma":[0.000070651644,0.00012233929,0.004142455,0.0000069020753,0.000014828947,0.0004495211,0.00003354415,0.0023679887,0.9907312,0.0003028273,0.0017440409,0.000013817539],"about_ca_topic_score_codex":0.00038619648,"about_ca_topic_score_gemma":0.0007329356,"teacher_disagreement_score":0.0029197063,"about_ca_system_score_codex":0.00039611742,"about_ca_system_score_gemma":0.00021175166,"threshold_uncertainty_score":0.009767354},"labels":[],"label_agreement":null},{"id":"W2519176635","doi":"","title":"Regulation of STING expression via the RIG-I dependent RNA sensing pathway","year":2014,"lang":"en","type":"article","venue":"Journal of Vaccines & Vaccination","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Sting; IRF3; RIG-I; Biology; Cell biology; Signal transducing adaptor protein; RNA; Stimulator of interferon genes; Signal transduction; Innate immune system; Receptor; Gene; Genetics","score_opus":0.009503253531591191,"score_gpt":0.2395547087147246,"score_spread":0.2300514551831334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2519176635","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9835556,0.00745615,0.0052394844,0.00011330342,0.000058423026,0.000055706347,0.0010463969,0.00016095265,0.0023140332],"genre_scores_gemma":[0.99379843,0.0020979724,0.0022106983,0.000041040686,0.000016140655,0.000036849557,0.00060650305,0.0000070565366,0.0011852363],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998282,0.000040225932,0.000020140484,0.0000263827,0.000039756607,0.000045179295],"domain_scores_gemma":[0.9999107,0.000013982799,0.000030480196,0.000013846491,0.00001413647,0.000016721977],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012876415,0.00029165327,0.00021217122,0.00029230717,0.00012821172,0.0003415745,0.00010984179,0.00016177316,0.0008885349],"category_scores_gemma":[0.00009637341,0.00008125631,0.0003579062,0.00020144737,0.00018993877,0.00021234223,0.00019256707,0.00041181827,0.00028235855],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000099297846,0.0000111434065,0.00027777045,0.000047353264,0.0000035571115,0.000052428535,0.000012826459,0.000051737035,0.99788755,0.000097313285,0.000035317214,0.0014236632],"study_design_scores_gemma":[0.00000810848,0.00023043914,0.008608674,0.000008217701,0.000013340325,0.0001894301,0.000034806377,0.0012967935,0.9875026,0.00006136924,0.0020416372,0.0000046084465],"about_ca_topic_score_codex":0.00031534457,"about_ca_topic_score_gemma":0.00039415757,"teacher_disagreement_score":0.0008885349,"about_ca_system_score_codex":0.00027276404,"about_ca_system_score_gemma":0.00019112763,"threshold_uncertainty_score":0.002972424},"labels":[],"label_agreement":null},{"id":"W2519803246","doi":"10.1136/lupus-2016-000179.43","title":"II-13 Suppression of systemic autoimmunity by the innate immune adaptor sting","year":2016,"lang":"en","type":"article","venue":"Innate Immunity","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Sting; Autoimmunity; Medicine; Immunology; Systemic lupus erythematosus; Immune system; Internal medicine; Disease","score_opus":0.014871005397285596,"score_gpt":0.24458579806623604,"score_spread":0.22971479266895045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2519803246","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922678,0.00064295967,0.0020757902,0.0001329509,0.000047910497,0.000030652893,0.0012857519,0.00026532638,0.0032509132],"genre_scores_gemma":[0.98709726,0.00041431983,0.0023481303,0.00011383738,0.000020709058,0.000051664356,0.0016381573,0.000097531054,0.0082183955],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998356,0.00002477529,0.0000198071,0.000034146527,0.000032855656,0.00005274262],"domain_scores_gemma":[0.99977416,0.00001781327,0.00006936461,0.00003159048,0.00001670624,0.0000904235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013891522,0.0003549767,0.00023977828,0.00023998092,0.00013344151,0.00033922435,0.0002115305,0.0002820443,0.003139857],"category_scores_gemma":[0.000061033643,0.0001381314,0.00028326316,0.00012295788,0.00023815014,0.00014020337,0.00019087941,0.00086062716,0.0010429537],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025334145,0.000042031494,0.00014263592,0.000018709316,0.0000035795833,0.00003716178,0.0000051482816,0.00002625352,0.9985648,0.000058738366,0.00006678762,0.0007807874],"study_design_scores_gemma":[0.000045038,0.00065867393,0.0064451355,0.000009873534,0.0000136002645,0.00038485715,0.000034231616,0.00057794043,0.9890203,0.00004947881,0.0027558983,0.0000050398935],"about_ca_topic_score_codex":0.0007620666,"about_ca_topic_score_gemma":0.0011840205,"teacher_disagreement_score":0.003139857,"about_ca_system_score_codex":0.00024214391,"about_ca_system_score_gemma":0.00025523335,"threshold_uncertainty_score":0.0105038285},"labels":[],"label_agreement":null},{"id":"W2523992541","doi":"10.1128/jvi.01672-16","title":"Herpes Simplex Virus 1 Tegument Protein UL41 Counteracts IFIT3 Antiviral Innate Immunity","year":2016,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Natural Science Foundation of China","keywords":"Viral tegument; Biology; Innate immune system; Herpes simplex virus; Virology; Immunity; Virus; Immunology; Immune system","score_opus":0.011964946454577309,"score_gpt":0.25978342861729153,"score_spread":0.24781848216271424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2523992541","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98593277,0.007203702,0.002923064,0.0003006972,0.00013527709,0.00004502642,0.0003571712,0.00021535938,0.0028869226],"genre_scores_gemma":[0.99324554,0.0016706175,0.0018687266,0.00015984225,0.000027511915,0.000051492974,0.0006159851,0.000026842277,0.0023335046],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997495,0.00003335793,0.000024375271,0.000044027554,0.00007106261,0.00007764351],"domain_scores_gemma":[0.9999176,0.000010495792,0.000022051787,0.00001121934,0.0000164791,0.000022151231],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014874044,0.0004710637,0.0003370974,0.0002607621,0.00022635127,0.00035287533,0.00020053325,0.00034520333,0.0011540706],"category_scores_gemma":[0.00013651726,0.00010743559,0.00040384405,0.00014346835,0.00030973047,0.00023390511,0.0003226453,0.00086587213,0.00041943617],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000764873,0.000017198412,0.00016731984,0.000055521916,0.000006149371,0.000048151822,0.000011679031,0.000038377897,0.99787474,0.000106281565,0.00007453207,0.0015235475],"study_design_scores_gemma":[0.000030241363,0.00027137945,0.0056748088,0.000014211877,0.000023798872,0.00044488808,0.00004993234,0.0010406297,0.9860166,0.00013838094,0.0062877852,0.000007515348],"about_ca_topic_score_codex":0.00034179862,"about_ca_topic_score_gemma":0.00039835565,"teacher_disagreement_score":0.0011540706,"about_ca_system_score_codex":0.00036407466,"about_ca_system_score_gemma":0.0003322946,"threshold_uncertainty_score":0.003860712},"labels":[],"label_agreement":null},{"id":"W2524031756","doi":"10.1016/j.cyto.2016.09.002","title":"Abnormal regulation of the antiviral response in neurological/neurodegenerative diseases","year":2016,"lang":"en","type":"review","venue":"Cytokine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Michael G. DeGroote Institute for Infectious Disease Research, McMaster University","keywords":"Neuroinflammation; Amyotrophic lateral sclerosis; Disease; Multiple sclerosis; Mechanism (biology); Neuroscience; Medicine; Biology; Bioinformatics; Immunology; Pathology","score_opus":0.021993849068728824,"score_gpt":0.2830209255606404,"score_spread":0.2610270764919116,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2524031756","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000104681116,0.99877053,0.00012978159,0.00021372366,0.00024539177,0.0000019646232,0.000011995163,0.00000568225,0.00051618664],"genre_scores_gemma":[0.00089797744,0.9977933,0.00016731895,0.00016656336,0.00045823978,0.0000037356895,0.000027397502,0.0000014233202,0.00048416478],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99982625,0.000024152081,0.00003305009,0.000031793123,0.000061420105,0.00002338945],"domain_scores_gemma":[0.9997683,0.000086038235,0.000048484053,0.000008985059,0.000056321274,0.00003178576],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056680007,0.0008439895,0.0012863697,0.0013421241,0.00022363504,0.0012285718,0.0007371918,0.0011052323,0.0019462429],"category_scores_gemma":[0.000560364,0.00024525347,0.000279359,0.0014467811,0.0005764892,0.0012714337,0.0008097837,0.001705358,0.0013275507],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015222994,0.00004986235,0.0002467371,0.010037687,0.000060572587,0.00033319247,0.000049976887,0.00033212363,0.0049699796,0.0037590368,0.027774613,0.95223397],"study_design_scores_gemma":[0.000023641433,0.00006844053,0.0011150368,0.0022231895,0.00011031041,0.0021922349,0.00006158094,0.00012994955,0.0013610617,0.0032147656,0.9894776,0.000022235223],"about_ca_topic_score_codex":0.0005322019,"about_ca_topic_score_gemma":0.000918082,"teacher_disagreement_score":0.0019462429,"about_ca_system_score_codex":0.0005333905,"about_ca_system_score_gemma":0.0010112002,"threshold_uncertainty_score":0.006510794},"labels":[],"label_agreement":null},{"id":"W2525729338","doi":"10.1128/jvi.00748-16","title":"RIG-I-Mediated STING Upregulation Restricts Herpes Simplex Virus 1 Infection","year":2016,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":83,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Government of Canada; McGill University","keywords":"Biology; Sting; Innate immune system; STAT1; Stimulator of interferon genes; Herpes simplex virus; Autocrine signalling; IRF3; Cell biology; Signal transduction; RIG-I; Immune system; Downregulation and upregulation; Paracrine signalling; Tumor necrosis factor alpha; Immunology; Virus; Cell culture; Receptor; Genetics; Gene","score_opus":0.015281660358686328,"score_gpt":0.25558250103494756,"score_spread":0.24030084067626123,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2525729338","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9667358,0.014596632,0.008161598,0.00018649125,0.00019983467,0.00009931034,0.0010416996,0.0004207277,0.0085580135],"genre_scores_gemma":[0.9923838,0.002010424,0.002579441,0.000061008628,0.000041988118,0.000043738622,0.00059425924,0.000024005334,0.0022614996],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981314,0.000032243453,0.000019465764,0.00003039496,0.00004220961,0.000062572006],"domain_scores_gemma":[0.99988544,0.00002274563,0.00003578769,0.000016729546,0.000012662482,0.00002666105],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015761936,0.00043562456,0.00020164896,0.00019562937,0.00013925353,0.0003989057,0.00023106893,0.00024104703,0.003776696],"category_scores_gemma":[0.00016054475,0.00008285098,0.0002742211,0.00012798219,0.00031158747,0.00022684106,0.0002921609,0.00047721178,0.0013840247],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015926521,0.000018993564,0.00015669856,0.00008147366,0.000002108873,0.000039396884,0.000012724004,0.000049318536,0.9974171,0.00007534213,0.000058044858,0.0019295412],"study_design_scores_gemma":[0.000013212307,0.0003563608,0.0035288304,0.000025066145,0.00001465658,0.00029310142,0.000037558504,0.0006906907,0.990893,0.000055156434,0.004087766,0.000004540193],"about_ca_topic_score_codex":0.00018512899,"about_ca_topic_score_gemma":0.00029074072,"teacher_disagreement_score":0.003776696,"about_ca_system_score_codex":0.0003329361,"about_ca_system_score_gemma":0.00022487903,"threshold_uncertainty_score":0.012634337},"labels":[],"label_agreement":null},{"id":"W2526995495","doi":"10.1111/boc.201600034","title":"Apoptotic properties of the type 1 interferon induced family of human mitochondrial membrane ISG12 proteins","year":2016,"lang":"en","type":"article","venue":"Biology of the Cell","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":116,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Sundhed og Sygdom, Det Frie Forskningsråd; Kræftens Bekæmpelse","keywords":"Biology; Bcl-2 family; Mitochondrion; Interferon; Inner mitochondrial membrane; Apoptosis; Cell biology; Virology; Genetics; Programmed cell death","score_opus":0.029527859013297696,"score_gpt":0.23528164859873563,"score_spread":0.20575378958543794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2526995495","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922767,0.004130927,0.0013003974,0.00016019473,0.00003596338,0.000021433856,0.000806699,0.000036542056,0.0012311852],"genre_scores_gemma":[0.99312323,0.0013201864,0.0013178386,0.000065258304,0.000018042116,0.000024248839,0.0022533739,0.000009012317,0.0018688529],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999032,0.00002058334,0.000007639208,0.000015832353,0.00003603412,0.000016762342],"domain_scores_gemma":[0.99988866,0.000018247809,0.000037215985,0.0000101831265,0.000026124027,0.000019588546],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000084645006,0.00023664045,0.00010256044,0.00017913213,0.00013784837,0.00015814205,0.00010050926,0.00018584298,0.0019196505],"category_scores_gemma":[0.00015664069,0.000038943548,0.00021464673,0.00019426353,0.000113122245,0.000086561035,0.000100793455,0.00028537124,0.00049677625],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050509913,0.0000226666,0.0014072193,0.00010956467,0.000010751198,0.00013286476,0.00002346068,0.000054741995,0.9934841,0.00010260122,0.00014028203,0.004006641],"study_design_scores_gemma":[0.00004258036,0.0005205904,0.049094375,0.000027791486,0.000051973693,0.002555622,0.000060406168,0.0010800519,0.93584347,0.00016527432,0.010549449,0.000008389424],"about_ca_topic_score_codex":0.00026286163,"about_ca_topic_score_gemma":0.00025693464,"teacher_disagreement_score":0.0019196505,"about_ca_system_score_codex":0.00027583214,"about_ca_system_score_gemma":0.000081312966,"threshold_uncertainty_score":0.006421864},"labels":[],"label_agreement":null},{"id":"W2528427174","doi":"10.1016/j.celrep.2016.09.009","title":"Association of a Network of Interferon-Stimulated Genes with a Locus Encoding a Negative Regulator of Non-conventional IKK Kinases and IFNB1","year":2016,"lang":"en","type":"article","venue":"Cell Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; Université de Montréal; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Biology; Gene silencing; Gene; TANK-binding kinase 1; Genetics; Kinase; Locus (genetics); Regulator; RNA interference; IκB kinase; Cell biology; Transcription factor; Protein kinase A; MAP kinase kinase kinase; RNA","score_opus":0.006015113510955366,"score_gpt":0.2116649070153298,"score_spread":0.20564979350437443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2528427174","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99463487,0.00024525492,0.0043409877,0.00002882882,0.000005364677,0.000007662539,0.00027369978,0.000042676875,0.00042069558],"genre_scores_gemma":[0.9959423,0.00008857298,0.0023252247,0.000032028507,0.0000042560546,0.000013671831,0.00049079594,0.000011745809,0.0010913153],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998673,0.000011798792,0.000009698565,0.00005659317,0.000028222672,0.00002631927],"domain_scores_gemma":[0.99982125,0.000022339487,0.00008534519,0.000013297134,0.000013140087,0.000044746543],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009325836,0.00030569322,0.00020461554,0.00047902885,0.00011503359,0.00017828014,0.0001767883,0.00017274343,0.001281676],"category_scores_gemma":[0.00011404787,0.00013929178,0.0002963925,0.0001763218,0.00020795963,0.000119676384,0.00031322174,0.00032921546,0.00022957564],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000092834634,0.000009272674,0.002843952,0.0000132664645,0.000008438035,0.00012255258,0.00000767176,0.000063353444,0.9958413,0.0000810803,0.000014097641,0.0009021574],"study_design_scores_gemma":[0.000059142876,0.0003703508,0.40868673,0.000029056153,0.00012444158,0.003081069,0.00012315999,0.004524665,0.5803426,0.00050830806,0.0021318642,0.00001864495],"about_ca_topic_score_codex":0.00034305218,"about_ca_topic_score_gemma":0.00037547134,"teacher_disagreement_score":0.001281676,"about_ca_system_score_codex":0.0002297011,"about_ca_system_score_gemma":0.00014131928,"threshold_uncertainty_score":0.00428766},"labels":[],"label_agreement":null},{"id":"W2530312898","doi":"10.1038/ni.3581","title":"USP15 regulates type I interferon response and is required for pathogenesis of neuroinflammation","year":2016,"lang":"en","type":"article","venue":"Nature Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":98,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University and Génome Québec Innovation Centre; Jewish General Hospital; Université de Sherbrooke; McMaster University; Université de Montréal; McGill University","funders":"Canadian Institutes of Health Research; McGill University","keywords":"Neuroinflammation; Experimental autoimmune encephalomyelitis; Immunology; Pathogenesis; Plasmodium berghei; Biology; Interferon; Inflammation; Microglia; Medicine","score_opus":0.009868999203628335,"score_gpt":0.2559399581257745,"score_spread":0.2460709589221462,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2530312898","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9805562,0.008323914,0.005806747,0.0007701527,0.00021852105,0.00002586563,0.00088127336,0.00027540317,0.0031419278],"genre_scores_gemma":[0.9929508,0.0009709087,0.0026949658,0.00013813074,0.000034556306,0.0000117985255,0.0008062241,0.000058604594,0.0023339593],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994968,0.00006997802,0.00005512401,0.000109180415,0.00015593636,0.00011291172],"domain_scores_gemma":[0.9994585,0.000041522726,0.00021135864,0.000075735734,0.00006917831,0.00014367761],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045067567,0.0005095954,0.0004687461,0.00053915835,0.00036722756,0.0009324818,0.00047667988,0.0007693011,0.0019038881],"category_scores_gemma":[0.0003587963,0.00035105753,0.0006588051,0.00020985828,0.0006996849,0.0007033625,0.00061838474,0.0009743928,0.0008494261],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005015578,0.000026209864,0.0029340435,0.000067023124,0.00003118179,0.00029704382,0.000030784642,0.00009601251,0.9905359,0.0007576601,0.00036569068,0.0043568634],"study_design_scores_gemma":[0.00006182884,0.00023249375,0.0655421,0.000048861453,0.000064993554,0.002122212,0.00017504836,0.0029564085,0.91743076,0.0018354275,0.009498913,0.000030954234],"about_ca_topic_score_codex":0.0004739921,"about_ca_topic_score_gemma":0.0008155929,"teacher_disagreement_score":0.0019038881,"about_ca_system_score_codex":0.0007248738,"about_ca_system_score_gemma":0.00033092382,"threshold_uncertainty_score":0.0063691735},"labels":[],"label_agreement":null},{"id":"W2545577014","doi":"10.3390/v8110297","title":"The Importance of Physiologically Relevant Cell Lines for Studying Virus–Host Interactions","year":2016,"lang":"en","type":"review","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Immortalised cell line; Cell culture; Biology; Interferon; Virus; Cell biology; Phenotype; Primary cell; Viral replication; Cell; Innate immune system; Virology; Gene; Immunology; Genetics; Immune system","score_opus":0.08750252382150983,"score_gpt":0.36655480502354243,"score_spread":0.2790522812020326,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2545577014","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00032571168,0.9950324,0.0011323156,0.0004405095,0.00054909196,0.0000140316615,0.00004329065,0.00001797551,0.0024446845],"genre_scores_gemma":[0.001911161,0.9939889,0.0020539432,0.00029852285,0.00025720242,0.00003621441,0.00010925829,0.0000099537965,0.0013348348],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995727,0.000090717745,0.00006641059,0.000068068,0.00016653053,0.00003550712],"domain_scores_gemma":[0.99930894,0.00036491422,0.000077208366,0.00005234453,0.00013595264,0.000060690094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014459842,0.0008659385,0.0016437506,0.0017402337,0.00040299582,0.0015268794,0.0010943041,0.001522676,0.0022211538],"category_scores_gemma":[0.0008552537,0.00030982852,0.0005606581,0.0013992719,0.0011483002,0.0022910263,0.000834149,0.0034039582,0.0022056052],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000103294195,0.00011105252,0.0004239705,0.017277224,0.000068828595,0.00057480886,0.00023976319,0.0005300756,0.055724956,0.034043003,0.022031883,0.8688711],"study_design_scores_gemma":[0.0000063720336,0.00006377582,0.00042175315,0.000999859,0.00003542374,0.0009686063,0.00006803885,0.000054328815,0.00596317,0.003239866,0.98816,0.000018754437],"about_ca_topic_score_codex":0.0005653856,"about_ca_topic_score_gemma":0.0008193257,"teacher_disagreement_score":0.0022211538,"about_ca_system_score_codex":0.0007921352,"about_ca_system_score_gemma":0.00092336314,"threshold_uncertainty_score":0.0076471567},"labels":[],"label_agreement":null},{"id":"W2547490564","doi":"10.1111/jnc.13882","title":"A novel function of <scp>TBK</scp>1 as a target of Cdon in oligodendrocyte differentiation and myelination","year":2016,"lang":"en","type":"article","venue":"Journal of Neurochemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital; McGill University","funders":"Multiple Sclerosis Society; Multiple Sclerosis Society of Canada; McGill University","keywords":"Biology; Oligodendrocyte; Phosphorylation; Cell biology; Myelin basic protein; Myelin; Central nervous system; Neuroscience","score_opus":0.00792488666187789,"score_gpt":0.22128285057268646,"score_spread":0.21335796391080858,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2547490564","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9878533,0.004865331,0.0046228208,0.0002054383,0.000043323857,0.000017529377,0.0005366054,0.00014291331,0.0017127281],"genre_scores_gemma":[0.9925944,0.001137313,0.0021379364,0.00008400532,0.000013881878,0.000021056721,0.0007501721,0.000030160834,0.0032311045],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992037,0.0000058047895,0.000004999448,0.000028677796,0.000019286312,0.000020768452],"domain_scores_gemma":[0.99993336,0.000006058943,0.000024095078,0.0000057951743,0.000008227198,0.000022478882],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006760268,0.00037578755,0.00021234363,0.00020888091,0.00023426511,0.00037956165,0.00023380009,0.00025762714,0.0011297873],"category_scores_gemma":[0.00008213898,0.0001083808,0.00025998236,0.00015477075,0.00024668404,0.00024730666,0.00022181153,0.0004135693,0.00045187198],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006454284,0.000004624833,0.00019714504,0.000031592608,0.0000029833864,0.000091858885,0.0000069213693,0.00003216948,0.9986607,0.000119139346,0.00003178806,0.0007566324],"study_design_scores_gemma":[0.00001289101,0.00007676603,0.011348883,0.00000661404,0.000017563165,0.00075102947,0.00002282894,0.0009839678,0.98345804,0.00011386549,0.0032010674,0.000006393403],"about_ca_topic_score_codex":0.0006627663,"about_ca_topic_score_gemma":0.00083645043,"teacher_disagreement_score":0.0011297873,"about_ca_system_score_codex":0.00050098135,"about_ca_system_score_gemma":0.00023880522,"threshold_uncertainty_score":0.003779471},"labels":[],"label_agreement":null},{"id":"W2549114809","doi":"10.3389/fimmu.2016.00498","title":"Viral Evasion Strategies in Type I IFN Signaling – A Summary of Recent Developments","year":2016,"lang":"en","type":"review","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":137,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"Deutsche Forschungsgemeinschaft","keywords":"Interferon; Biology; Innate immune system; Immune system; Evasion (ethics); First line; Viral infection; Signal transduction; Virology; Organism; Cell biology; Immunology; Virus; Medicine; Genetics","score_opus":0.03063508970209361,"score_gpt":0.2991140986883297,"score_spread":0.2684790089862361,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2549114809","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00018236096,0.99808633,0.00021546122,0.0002461569,0.00027835116,0.0000033427216,0.000011802231,0.0000072432176,0.00096890493],"genre_scores_gemma":[0.00079245755,0.9979448,0.0002476078,0.00013212135,0.00028088104,0.000004097683,0.000022727108,0.0000017119619,0.00057364115],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998716,0.000016693091,0.00001873648,0.00003159489,0.000043443557,0.000017972034],"domain_scores_gemma":[0.99979144,0.000083149396,0.000032528562,0.000007396579,0.00005638912,0.000029133234],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054612005,0.00083986996,0.00097027596,0.0016838346,0.00029110158,0.0012329938,0.00066211156,0.000990515,0.0024572334],"category_scores_gemma":[0.0003520029,0.000266407,0.000350876,0.0014855207,0.0004838707,0.0017948535,0.00069498835,0.0016479855,0.001919698],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009534815,0.000084553896,0.00024155091,0.016640188,0.00005179285,0.00034853112,0.0001161005,0.00058084336,0.008629813,0.010757874,0.024539687,0.93791366],"study_design_scores_gemma":[0.00000568745,0.00010602846,0.0005267373,0.0020693948,0.000046659527,0.0012160622,0.00007796099,0.00014080072,0.0015410148,0.0028890017,0.9913601,0.000020452562],"about_ca_topic_score_codex":0.00049082696,"about_ca_topic_score_gemma":0.0007329248,"teacher_disagreement_score":0.0024572334,"about_ca_system_score_codex":0.0005822945,"about_ca_system_score_gemma":0.00055735576,"threshold_uncertainty_score":0.008220255},"labels":[],"label_agreement":null},{"id":"W2551682012","doi":"10.1038/srep37721","title":"GapmeR cellular internalization by macropinocytosis induces sequence-specific gene silencing in human primary T-cells","year":2016,"lang":"en","type":"article","venue":"Scientific Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Lee Kong Chian School of Medicine, Nanyang Technological University; Ministry of Education, India; Nanyang Technological University","keywords":"Gene silencing; Biology; Transfection; Jurkat cells; Cell biology; Internalization; Gene; Molecular biology; Cell; Genetics; Immune system; T cell","score_opus":0.022432455150444376,"score_gpt":0.2443337333836322,"score_spread":0.22190127823318784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2551682012","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917494,0.0010504124,0.0052725784,0.00007182608,0.000026895405,0.000057017667,0.00029330354,0.00012301811,0.001355731],"genre_scores_gemma":[0.99527943,0.0004366759,0.002001333,0.00006605073,0.000009626702,0.000056374658,0.00050158886,0.000021987838,0.0016268637],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999821,0.000028886125,0.000015429296,0.00004726798,0.000034858043,0.000052663945],"domain_scores_gemma":[0.9999248,0.000022264314,0.000012699964,0.000015710562,0.000009827717,0.000014713401],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014876314,0.00027267952,0.00033953722,0.00012693841,0.00011342382,0.00032098027,0.00013427602,0.00021999617,0.0009793815],"category_scores_gemma":[0.00010206259,0.00011643248,0.0002801463,0.00011215953,0.00014762912,0.00008475849,0.00021326971,0.00047898595,0.00043834926],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005317627,0.000012180175,0.00005272799,0.000015014856,0.000003261566,0.000021402046,0.000013039212,0.000029984683,0.9993591,0.000032837957,0.000021777758,0.00038563897],"study_design_scores_gemma":[0.000011441596,0.00016376338,0.0010606303,0.0000018480316,0.000010479793,0.00007595772,0.000009897722,0.00049150974,0.9974597,0.0000120196555,0.0007016592,0.0000011185012],"about_ca_topic_score_codex":0.00053412135,"about_ca_topic_score_gemma":0.00066044624,"teacher_disagreement_score":0.0009793815,"about_ca_system_score_codex":0.0002926881,"about_ca_system_score_gemma":0.00017241252,"threshold_uncertainty_score":0.0032764077},"labels":[],"label_agreement":null},{"id":"W2553435007","doi":"10.1139/cjpp-2016-0060","title":"Aspirin and (or) omega-3 polyunsaturated fatty acids protect against corticohippocampal neurodegeneration and downregulate lipoxin A<sub>4</sub> production and formyl peptide receptor-like 1 expression in pentylenetetrazole-kindled rats","year":2016,"lang":"en","type":"article","venue":"Canadian Journal of Physiology and Pharmacology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Lipoxin; Aspirin; Polyunsaturated fatty acid; Inflammation; Epilepsy; Receptor; Neuroprotection; Chemistry; Pharmacology; Neurodegeneration; Downregulation and upregulation; Internal medicine; Endocrinology; Docosahexaenoic acid; Medicine; Biochemistry; Fatty acid","score_opus":0.011844731353483058,"score_gpt":0.2315327252546365,"score_spread":0.21968799390115346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2553435007","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978808,0.00072925544,0.0004763238,0.00009355885,0.000030884345,0.000024012186,0.00026064023,0.000052175,0.00045240592],"genre_scores_gemma":[0.9928981,0.0016073353,0.0010609142,0.00010257346,0.000014051833,0.000077955,0.0004452322,0.000014495826,0.0037793538],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999087,0.000008864119,0.000015259286,0.00001620238,0.000021028654,0.000030053063],"domain_scores_gemma":[0.999871,0.00000670679,0.00005404773,0.000011033652,0.000011021233,0.00004627425],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007178657,0.0005826109,0.00047844066,0.00044296333,0.0001610696,0.00019757157,0.00018041395,0.00033371497,0.0012774306],"category_scores_gemma":[0.00008111601,0.00021675807,0.00039911113,0.00016469411,0.00031282363,0.00026127574,0.00018190777,0.0007220288,0.00023223778],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001812252,0.00018716868,0.00047595202,0.000068157184,0.000024572413,0.00016976177,0.000027270815,0.000046574423,0.9954326,0.000044722918,0.00005410152,0.0016568814],"study_design_scores_gemma":[0.00020759378,0.006750136,0.02313763,0.000023171518,0.00013749104,0.00047665567,0.00019883784,0.0005620325,0.96603185,0.00011670872,0.0023390246,0.000018855728],"about_ca_topic_score_codex":0.0014794539,"about_ca_topic_score_gemma":0.0035302893,"teacher_disagreement_score":0.0014794539,"about_ca_system_score_codex":0.00025376148,"about_ca_system_score_gemma":0.00028839684,"threshold_uncertainty_score":0.0042734146},"labels":[],"label_agreement":null},{"id":"W2553459805","doi":"10.1182/blood.v118.21.560.560","title":"Growth Factor Independent-1 (Gfi1) As a New Target for Human Leukemia Therapy","year":2011,"lang":"en","type":"article","venue":"Blood","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"","keywords":"Cancer research; Leukemia; Lymphoma; Transgene; Biology; B cell; Cre recombinase; Genetically modified mouse; Immunology; Gene; Genetics; Antibody","score_opus":0.036466757715918646,"score_gpt":0.25969426584669325,"score_spread":0.2232275081307746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2553459805","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46647653,0.44581565,0.023486117,0.016922107,0.0028379203,0.00054327527,0.0033650873,0.0012264657,0.039326876],"genre_scores_gemma":[0.819119,0.13528308,0.011965862,0.0035491004,0.00048410305,0.00043895227,0.0032611983,0.000107738415,0.0257909],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993503,0.000012504747,0.0000033696665,0.000010987137,0.000021292257,0.000016839338],"domain_scores_gemma":[0.99995124,0.000009606036,0.000011892976,0.0000045743104,0.0000086261325,0.000014084789],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002547073,0.0003581011,0.00031059925,0.0003189,0.00010319124,0.00042117023,0.00029262615,0.00039720663,0.003135335],"category_scores_gemma":[0.00010699505,0.00006949049,0.00024252957,0.00025097563,0.00019882432,0.00024094523,0.0002853884,0.001094497,0.0008589006],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001745714,0.0007299617,0.002909182,0.0016741537,0.00011710605,0.0006326022,0.000113996546,0.001368976,0.5355497,0.008056799,0.02527386,0.42182794],"study_design_scores_gemma":[0.0010095548,0.0050809174,0.0071319295,0.0004889494,0.00027772173,0.00210213,0.000103504615,0.0024817134,0.3759862,0.003317481,0.6019808,0.000039116825],"about_ca_topic_score_codex":0.00024135174,"about_ca_topic_score_gemma":0.0005103294,"teacher_disagreement_score":0.003135335,"about_ca_system_score_codex":0.0004384017,"about_ca_system_score_gemma":0.0002977185,"threshold_uncertainty_score":0.010488689},"labels":[],"label_agreement":null},{"id":"W2553947646","doi":"10.1182/blood.v110.11.93.93","title":"Differential Expression and Re-Localization of Potential Cell Fate Determinants in Hematopoietic and Leukemia Stem Cells.","year":2007,"lang":"en","type":"article","venue":"Blood","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"","keywords":"Biology; Stem cell; Haematopoiesis; Progenitor cell; Molecular biology; Stem cell marker; Cell biology; Genetics","score_opus":0.006658621103958617,"score_gpt":0.2151692956203146,"score_spread":0.20851067451635596,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2553947646","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98829097,0.0021280218,0.005435659,0.000049397975,0.00001669714,0.00005603896,0.0016177908,0.0000878968,0.0023173774],"genre_scores_gemma":[0.9826523,0.0010593047,0.0073854686,0.0000874244,0.0000110823985,0.000108738765,0.0039344565,0.000064942215,0.0046962183],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997688,0.000018958555,0.000019636489,0.00006524488,0.000072980256,0.000054371874],"domain_scores_gemma":[0.9998592,0.000029249351,0.0000307095,0.000018290933,0.000022060383,0.00004041823],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017754966,0.00019672362,0.00019252925,0.0004648387,0.00015642814,0.00038324832,0.00015877771,0.00025396407,0.0015987136],"category_scores_gemma":[0.00015951095,0.00012365205,0.0001804833,0.00030828515,0.00020343726,0.00027049694,0.0002927453,0.00046512505,0.0007767936],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049443126,0.0000049887226,0.00042655497,0.000015635524,0.0000011565434,0.000021878303,0.00001707189,0.000013187442,0.99803704,0.00008684211,0.000015872405,0.0013103017],"study_design_scores_gemma":[0.00001806065,0.00034760576,0.030456923,0.000015807995,0.000024713705,0.0005230607,0.00010491666,0.000564295,0.96253645,0.0001120626,0.0052900184,0.0000061375463],"about_ca_topic_score_codex":0.00034928156,"about_ca_topic_score_gemma":0.00082115544,"teacher_disagreement_score":0.0015987136,"about_ca_system_score_codex":0.00022162929,"about_ca_system_score_gemma":0.00017241696,"threshold_uncertainty_score":0.005348265},"labels":[],"label_agreement":null},{"id":"W2557943679","doi":"10.1107/s2053273314091645","title":"Structural Characterization of Human Immunity-Related GTPase Family M (IRGM)","year":2014,"lang":"en","type":"article","venue":"Acta Crystallographica Section A Foundations and Advances","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Cardiolipin; GTPase; Autophagy; Biology; Cell biology; Small GTPase; Effector; Genetics; Signal transduction; Apoptosis","score_opus":0.009443118730605993,"score_gpt":0.24906593329694077,"score_spread":0.23962281456633477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2557943679","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98581356,0.005042534,0.0034512233,0.00075378804,0.00009257963,0.00007475722,0.0017029259,0.00010332989,0.0029653565],"genre_scores_gemma":[0.971975,0.0026373046,0.010341981,0.00040176505,0.000048666247,0.000048361628,0.0109647615,0.00003879438,0.0035433553],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999169,0.00001923852,0.000005234798,0.000015743377,0.000025819469,0.000016971815],"domain_scores_gemma":[0.9998652,0.000026969734,0.000029990057,0.000015059396,0.000024535808,0.00003819466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022073176,0.00029402974,0.0002459907,0.00019362572,0.00019477116,0.00020368665,0.00032952853,0.00036864198,0.0010462352],"category_scores_gemma":[0.00041765525,0.00009930336,0.00026222132,0.00029729333,0.00017360934,0.00019081045,0.00017779328,0.00055662653,0.0005066176],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000609756,0.00018820059,0.0030021,0.00021164825,0.00003040565,0.0008674181,0.0001331209,0.0023508165,0.97640276,0.0010513908,0.0018863104,0.013266049],"study_design_scores_gemma":[0.00021011208,0.0013179551,0.047333892,0.00007610365,0.00009603546,0.00418282,0.0002745584,0.01583326,0.8171867,0.0010454253,0.1123964,0.00004675112],"about_ca_topic_score_codex":0.0012432934,"about_ca_topic_score_gemma":0.0010445794,"teacher_disagreement_score":0.0012432934,"about_ca_system_score_codex":0.00044999117,"about_ca_system_score_gemma":0.00036716086,"threshold_uncertainty_score":0.0035000443},"labels":[],"label_agreement":null},{"id":"W2558538169","doi":"10.25011/cim.v39i6.27500","title":"Investigation of the expression of RIF1 gene on head and neck, pancreatic and brain cancer and cancer stem cells","year":2016,"lang":"en","type":"article","venue":"Clinical and investigative medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Cancer stem cell; Pancreatic cancer; Cancer; Cancer research; Stem cell; Cancer cell; Cell culture; Metastasis; Biology; Genetics","score_opus":0.10759066975025935,"score_gpt":0.33535034008519604,"score_spread":0.2277596703349367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2558538169","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876781,0.0077192816,0.0016398124,0.000106688494,0.000025530306,0.000046558685,0.0010663829,0.000044307963,0.0016733017],"genre_scores_gemma":[0.98223925,0.005241027,0.0040968745,0.00010300759,0.000024294459,0.00013447335,0.0034590613,0.00001685409,0.0046851984],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99988616,0.000012750831,0.000008828521,0.000028995126,0.000042821135,0.00002048271],"domain_scores_gemma":[0.9998838,0.000025612926,0.000029906247,0.000008612579,0.000033869408,0.000018189725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014073137,0.00019202233,0.00019051811,0.00037478976,0.00015304596,0.00018740693,0.00012994654,0.00021218132,0.0012685322],"category_scores_gemma":[0.00012552374,0.00007327496,0.0002114829,0.0003018219,0.00020792194,0.00020239693,0.00009916114,0.00030736893,0.0003703375],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001510485,0.000018386336,0.0020260569,0.00015367112,0.000006850693,0.00013182477,0.00005168899,0.000035931982,0.9935277,0.00005563869,0.00006410201,0.0037771454],"study_design_scores_gemma":[0.000017646043,0.000880306,0.060287986,0.000024242378,0.000054989938,0.0013293201,0.00022210243,0.00044311894,0.92792755,0.000059892413,0.008743264,0.000009514761],"about_ca_topic_score_codex":0.00045798338,"about_ca_topic_score_gemma":0.0005096496,"teacher_disagreement_score":0.0012685322,"about_ca_system_score_codex":0.00021449165,"about_ca_system_score_gemma":0.00021010675,"threshold_uncertainty_score":0.004243672},"labels":[],"label_agreement":null},{"id":"W2558697099","doi":"10.1107/s2053273314097538","title":"Towards a structural characterization of the IFIT antiviral complex","year":2014,"lang":"en","type":"article","venue":"Acta Crystallographica Section A Foundations and Advances","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Interactome; Innate immune system; Biology; Cell biology; Molecular biology; Genetics; Immune system; Gene","score_opus":0.010157352038999905,"score_gpt":0.24819815919723806,"score_spread":0.23804080715823817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2558697099","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9373889,0.01395634,0.03649418,0.0009731106,0.00019479817,0.00017584923,0.0034588603,0.00040083475,0.0069572018],"genre_scores_gemma":[0.9138547,0.008283583,0.050792363,0.0007102488,0.00014592675,0.0001846433,0.020443417,0.00018522638,0.0053997748],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997844,0.00003511233,0.000016093267,0.00005098505,0.000069973066,0.00004350278],"domain_scores_gemma":[0.99971825,0.00005533344,0.000049206927,0.00003738489,0.00008930429,0.000050542883],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030247497,0.00055779424,0.00038902674,0.0005069618,0.0005925998,0.00051747344,0.0009565418,0.00050695817,0.0026962545],"category_scores_gemma":[0.0007149173,0.00025305935,0.0004462192,0.00066579843,0.00030783872,0.00067582866,0.00035573507,0.0013529068,0.0010944341],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015272712,0.00008904994,0.0011795284,0.00021706549,0.000024457857,0.0002519623,0.00012030374,0.0012644914,0.9892719,0.0009568085,0.00077549473,0.005696276],"study_design_scores_gemma":[0.000041056486,0.00048730732,0.020040546,0.00007976812,0.00007454326,0.0015649156,0.00031783155,0.021179285,0.90054005,0.001434413,0.054196123,0.000044221473],"about_ca_topic_score_codex":0.0018078723,"about_ca_topic_score_gemma":0.001229978,"teacher_disagreement_score":0.0026962545,"about_ca_system_score_codex":0.0009018428,"about_ca_system_score_gemma":0.00038162974,"threshold_uncertainty_score":0.009019852},"labels":[],"label_agreement":null},{"id":"W2559179418","doi":"10.1107/s2053273314083703","title":"Crystal structure of N-terminal IFIT3 reveals domain-swapping dimerization","year":2014,"lang":"en","type":"article","venue":"Acta Crystallographica Section A Foundations and Advances","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"RNA; Stress granule; Tetratricopeptide; Chemistry; Molecular biology; Cell biology; Biology; Gene; Genetics; Messenger RNA; Translation (biology)","score_opus":0.006419452995399821,"score_gpt":0.24146195120325972,"score_spread":0.2350424982078599,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2559179418","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924092,0.0013626106,0.0013891882,0.0005367773,0.000072491894,0.00002026097,0.00072900066,0.00015032764,0.0033300845],"genre_scores_gemma":[0.9910947,0.0007926507,0.0026861534,0.00032092663,0.0000117301115,0.000017577271,0.0031502747,0.000041538853,0.0018844889],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998658,0.00001279502,0.0000053732642,0.000026823207,0.000054572116,0.000034695033],"domain_scores_gemma":[0.99989295,0.000017091734,0.000017152246,0.000005056558,0.000023473202,0.00004422878],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022328795,0.00024933877,0.0003460927,0.0000871717,0.00035026376,0.0003593272,0.0003994815,0.0004918775,0.0013940916],"category_scores_gemma":[0.00040348925,0.00013544715,0.00030515075,0.00025068675,0.00025900264,0.00019275479,0.00020740376,0.0012619825,0.00033919458],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021651348,0.0004344428,0.008910368,0.0002961055,0.00018961742,0.0037344373,0.00047736824,0.007089271,0.951843,0.0019655842,0.009225371,0.01366921],"study_design_scores_gemma":[0.0015170187,0.0013324135,0.1481621,0.00017198508,0.00031906355,0.009609612,0.001372294,0.1319257,0.6473246,0.0030220773,0.054984238,0.00025882846],"about_ca_topic_score_codex":0.0056634382,"about_ca_topic_score_gemma":0.0069694067,"teacher_disagreement_score":0.0056634382,"about_ca_system_score_codex":0.0010100083,"about_ca_system_score_gemma":0.00068399665,"threshold_uncertainty_score":0.011260927},"labels":[],"label_agreement":null},{"id":"W2559249883","doi":"10.1084/jem.20160303","title":"Interferon regulatory factor 2 protects mice from lethal viral neuroinvasion","year":2016,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Center for Advancing Translational Sciences; National Cancer Institute; National Institutes of Health; Memorial Sloan-Kettering Cancer Center; University Health Network; Greenberg Medical Research Institute; National Institute of Allergy and Infectious Diseases; Starr Foundation; Columbia University","keywords":"Interferon; Virology; Interferon regulatory factors; Biology; IRF1; Immunology; Transcription factor; Genetics; Immune system; Gene; Innate immune system","score_opus":0.02257898690839812,"score_gpt":0.26904338731773386,"score_spread":0.24646440040933573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2559249883","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99280566,0.0010600291,0.0024365631,0.00025671383,0.00009542837,0.00005279825,0.00073074066,0.000456347,0.0021057085],"genre_scores_gemma":[0.9801413,0.001359413,0.00456148,0.0002178673,0.000061131854,0.00011764453,0.0016456061,0.00015425374,0.01174137],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99975544,0.000037677783,0.000024862578,0.000056560504,0.000051637908,0.000073802235],"domain_scores_gemma":[0.9995795,0.00003646922,0.00014077935,0.0000617074,0.00003057104,0.000150974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003252392,0.0011380255,0.00045798733,0.0009952157,0.00024121003,0.00041319258,0.00046214918,0.00077278377,0.0023542452],"category_scores_gemma":[0.00016780019,0.00032561025,0.0003915984,0.000187388,0.00039638998,0.00039097955,0.0002285945,0.0013929795,0.00077034126],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047848024,0.00023040774,0.00027440462,0.000029904388,0.000011819899,0.00009299917,0.000018208293,0.00006906044,0.9966677,0.00020057365,0.00009979638,0.0018267125],"study_design_scores_gemma":[0.0002651548,0.0032353632,0.0064594955,0.000057084133,0.000052269523,0.000883153,0.000067564804,0.0014105148,0.9828027,0.00038247748,0.0043635415,0.000020647],"about_ca_topic_score_codex":0.00047618285,"about_ca_topic_score_gemma":0.00053452037,"teacher_disagreement_score":0.0023542452,"about_ca_system_score_codex":0.0003220531,"about_ca_system_score_gemma":0.0003333274,"threshold_uncertainty_score":0.007875681},"labels":[],"label_agreement":null},{"id":"W2560338088","doi":"10.1182/blood.v120.21.1100.1100","title":"Radioulnar Synostosis-Hematology (RUS-H) Syndrome: Description of the New Syndrome and Comparison to Similar Syndromes","year":2012,"lang":"en","type":"article","venue":"Blood","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; PTPN11; Noonan syndrome; Macrocytic anemia; Neutropenia; Leukocytosis; Pediatrics; Hypoplasia; Internal medicine; Anemia; Dermatology; Gastroenterology; Cancer","score_opus":0.02179334662971057,"score_gpt":0.24569709173228416,"score_spread":0.22390374510257358,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2560338088","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95652187,0.02327839,0.0047179703,0.0004228929,0.00016689068,0.00008042454,0.00054509693,0.00021591739,0.014050469],"genre_scores_gemma":[0.98456603,0.007389919,0.0039658295,0.00020940848,0.0002484284,0.00006036902,0.00056829146,0.000023015993,0.0029686026],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9998696,0.000015281114,0.00001917504,0.000039954994,0.000031494827,0.000024445808],"domain_scores_gemma":[0.99971944,0.000069308255,0.000101920654,0.00001767678,0.00002111574,0.000070567476],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009667005,0.0007154598,0.00041384363,0.0013084598,0.00015176131,0.00034271285,0.00032141356,0.00060579216,0.0021641066],"category_scores_gemma":[0.00041631327,0.00014935328,0.0002462676,0.00079732423,0.0004527347,0.00035338924,0.00054590614,0.00038860718,0.0005954385],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002933004,0.00019106,0.12039181,0.00040773186,0.00015006313,0.7215342,0.00045385078,0.0006211426,0.063139,0.0047120545,0.0038332704,0.08427252],"study_design_scores_gemma":[0.000026693564,0.00009372106,0.03343641,0.00002571795,0.00003456473,0.95770925,0.00008094438,0.00024292474,0.001553878,0.00040521394,0.006378593,0.000012053243],"about_ca_topic_score_codex":0.00047353597,"about_ca_topic_score_gemma":0.0005172712,"teacher_disagreement_score":0.0021641066,"about_ca_system_score_codex":0.00018904424,"about_ca_system_score_gemma":0.00019507318,"threshold_uncertainty_score":0.0072396398},"labels":[],"label_agreement":null},{"id":"W2562075881","doi":"10.1128/mcb.00537-16","title":"ArfGAP Domain-Containing Protein 2 (ADAP2) Integrates Upstream and Downstream Modules of RIG-I Signaling and Facilitates Type I Interferon Production","year":2016,"lang":"en","type":"article","venue":"Molecular and Cellular Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital","funders":"Canadian Institutes of Health Research; Ministry of Education - Singapore; National Research Foundation Singapore; Government of Canada","keywords":"IRF3; Biology; Signal transducing adaptor protein; Interferon regulatory factors; Cell biology; TRIF; Interferon; RIG-I; Transcription factor; Signal transduction; Interferon type I; TANK-binding kinase 1; Protein subunit; Phosphorylation; RNA; Protein kinase A; Gene; Virology; Receptor; Genetics; Innate immune system; Toll-like receptor","score_opus":0.007377345533035826,"score_gpt":0.2117535400458655,"score_spread":0.20437619451282968,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2562075881","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912519,0.0012964393,0.004109706,0.000098348326,0.00004612554,0.000022770084,0.0005782736,0.00017810926,0.002418227],"genre_scores_gemma":[0.99459994,0.0004316905,0.001836669,0.000040280924,0.000015801625,0.000021226577,0.0009641835,0.000015536049,0.002074719],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999879,0.000015428897,0.000007771361,0.00003941346,0.00003189228,0.000026422136],"domain_scores_gemma":[0.99995184,0.000004926682,0.000013180876,0.000008107147,0.0000052665887,0.000016589142],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010343013,0.0005559516,0.00016928949,0.00022825539,0.0002610437,0.0002783649,0.00018601635,0.0003088114,0.0011221777],"category_scores_gemma":[0.0000785919,0.00016004387,0.00029965577,0.00014335375,0.00020558081,0.00021211337,0.00049254234,0.00043371957,0.00060230243],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008788903,0.000018681538,0.0009070409,0.000028700684,0.000008375651,0.0001666165,0.000008008154,0.000081484846,0.9969472,0.00018993283,0.00007342542,0.0014826409],"study_design_scores_gemma":[0.000029634617,0.00023053055,0.022793407,0.0000067512233,0.000034253837,0.0029669073,0.000046170127,0.0025948603,0.9605336,0.00022466904,0.01052834,0.000010900364],"about_ca_topic_score_codex":0.0001382065,"about_ca_topic_score_gemma":0.00026905685,"teacher_disagreement_score":0.0011221777,"about_ca_system_score_codex":0.00027051527,"about_ca_system_score_gemma":0.0001503181,"threshold_uncertainty_score":0.0037540793},"labels":[],"label_agreement":null},{"id":"W2562644378","doi":"10.3389/fimmu.2016.00662","title":"Host and Viral Modulation of RIG-I-Mediated Antiviral Immunity","year":2017,"lang":"en","type":"review","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":130,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"RIG-I; Biology; Innate immune system; Pattern recognition receptor; Cell biology; Signal transduction; Viral replication; Intrinsic immunity; Virus; Interferon; Signal transducing adaptor protein; Virology; Viral pathogenesis; Transduction (biophysics); TLR3; Immune system; Immunology; Toll-like receptor","score_opus":0.028710257841896503,"score_gpt":0.3000536645062739,"score_spread":0.2713434066643774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2562644378","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00025758232,0.99741274,0.00022280776,0.00018856362,0.00029088501,0.0000037580153,0.000024297946,0.000009244069,0.0015900364],"genre_scores_gemma":[0.0011712651,0.99748766,0.00015196802,0.00012329395,0.00023215624,0.00000468529,0.000035590023,0.0000015278499,0.0007918173],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99987936,0.000017991655,0.000016168426,0.00002298036,0.000046451805,0.000016914608],"domain_scores_gemma":[0.9998857,0.000042493066,0.000020309273,0.0000048915254,0.000029911578,0.000016794564],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003323691,0.00060006866,0.0007453109,0.0013843405,0.00016486205,0.0007318611,0.0005253885,0.0006504606,0.0026820237],"category_scores_gemma":[0.00029347467,0.00016725836,0.00027046935,0.0010893091,0.00035410654,0.00093126856,0.0006484283,0.0010742832,0.0016333946],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008378342,0.00005618546,0.00022165585,0.013920365,0.000062295694,0.00025414425,0.00006485528,0.00034944635,0.012530845,0.0072361855,0.020371037,0.94484925],"study_design_scores_gemma":[0.000007693541,0.00007930894,0.00085885753,0.0018903185,0.000050495215,0.0013053408,0.000045407203,0.00008729535,0.0024684537,0.0023234414,0.9908648,0.00001867785],"about_ca_topic_score_codex":0.000263737,"about_ca_topic_score_gemma":0.00049825775,"teacher_disagreement_score":0.0026820237,"about_ca_system_score_codex":0.00052154955,"about_ca_system_score_gemma":0.0006584888,"threshold_uncertainty_score":0.008972287},"labels":[],"label_agreement":null},{"id":"W2564952670","doi":"10.1128/jvi.02417-16","title":"Herpes Simplex Virus 1 Ubiquitin-Specific Protease UL36 Abrogates NF-κB Activation in DNA Sensing Signal Pathway","year":2016,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":113,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Priority Academic Program Development of Jiangsu Higher Education Institutions; National Natural Science Foundation of China","keywords":"Biology; Innate immune system; Stimulator of interferon genes; Deubiquitinating enzyme; IκB kinase; NF-κB; Herpes simplex virus; Ubiquitin; Cell biology; Interferon; RIG-I; Signal transduction; IκBα; TLR3; Molecular biology; Virology; Virus; Immune system; Gene; Toll-like receptor; Biochemistry; Immunology","score_opus":0.01695091239779815,"score_gpt":0.24363225828539758,"score_spread":0.22668134588759944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2564952670","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931405,0.003170319,0.0019492896,0.00008664612,0.00006276861,0.00002652546,0.00045827276,0.00010496947,0.0010006605],"genre_scores_gemma":[0.9965808,0.0006496935,0.0009851509,0.000027598033,0.000008143769,0.000019763907,0.0004542977,0.0000115121,0.0012630764],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997956,0.00003853533,0.000030688927,0.000033235625,0.000043910124,0.00005808997],"domain_scores_gemma":[0.99988496,0.0000189295,0.00003161273,0.000023625731,0.000010327097,0.000030500201],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015218691,0.00047597202,0.0003105963,0.00018266715,0.00015725457,0.00023590874,0.0002476344,0.00023821784,0.001489667],"category_scores_gemma":[0.000099029705,0.00013063333,0.00032497075,0.00016802514,0.00025151751,0.00020478808,0.00020519365,0.00052019313,0.00039241664],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014462012,0.000039109353,0.000057119625,0.000045625635,0.00000549592,0.00002561637,0.000007227641,0.000040472136,0.9990355,0.00007728572,0.000025372896,0.0004966557],"study_design_scores_gemma":[0.000011762615,0.00019747853,0.00070705917,0.000003723434,0.000008438418,0.00011763597,0.000009049692,0.00036614068,0.99732363,0.00002604854,0.001226927,0.000002130177],"about_ca_topic_score_codex":0.00042023635,"about_ca_topic_score_gemma":0.00037556601,"teacher_disagreement_score":0.001489667,"about_ca_system_score_codex":0.00031790862,"about_ca_system_score_gemma":0.00017670436,"threshold_uncertainty_score":0.004983425},"labels":[],"label_agreement":null},{"id":"W2565862162","doi":"10.3389/fimmu.2016.00609","title":"Type-I Interferon Responses: From Friend to Foe in the Battle against Chronic Viral Infection","year":2016,"lang":"en","type":"review","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":179,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Fondation Jean-Louis Lévesque","keywords":"Immunology; Interferon; Immune system; Context (archaeology); Effector; Biology; Cytokine; Innate immune system; Chronic infection; Virology","score_opus":0.020139965643376084,"score_gpt":0.2979085821810528,"score_spread":0.2777686165376767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2565862162","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0009881664,0.9879866,0.0006585443,0.004038509,0.004473395,0.000009572765,0.00003199585,0.00003205975,0.0017810768],"genre_scores_gemma":[0.0065331925,0.97938156,0.00091530907,0.004461609,0.004306982,0.000028241495,0.00007388621,0.000018034643,0.004281101],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99975616,0.000071411865,0.000026268228,0.00003990233,0.000073629766,0.000032604687],"domain_scores_gemma":[0.9997085,0.00012871003,0.000033737437,0.000008904399,0.00008000916,0.00004013659],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007954426,0.00047197563,0.00075691484,0.0004638335,0.0003486757,0.0016047775,0.00062832754,0.0011823345,0.0023329218],"category_scores_gemma":[0.00081206206,0.00018116225,0.00030282498,0.00039634615,0.000709568,0.0022866598,0.00063131476,0.0027567467,0.0017099687],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046754134,0.00008941932,0.0005470188,0.015647316,0.00015992443,0.0004567998,0.0009281943,0.00045075195,0.02305238,0.029396001,0.13361245,0.79519224],"study_design_scores_gemma":[0.00000997108,0.00014846165,0.00040002502,0.0011279476,0.000038986233,0.00041110278,0.00015638457,0.000076725366,0.0015817103,0.005264693,0.9907692,0.000014890214],"about_ca_topic_score_codex":0.00025769667,"about_ca_topic_score_gemma":0.00060624094,"teacher_disagreement_score":0.0023329218,"about_ca_system_score_codex":0.0005967655,"about_ca_system_score_gemma":0.0007633028,"threshold_uncertainty_score":0.007804394},"labels":[],"label_agreement":null},{"id":"W2567870461","doi":"10.1158/1557-3265.pmccavuln16-b18","title":"Abstract B18: Development of human STING agonists for prostate cancer immunotherapy","year":2017,"lang":"en","type":"article","venue":"Clinical Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Cancer; Prostate cancer; Sting; Immunotherapy; Cancer research; Cancer immunotherapy; Cytotoxic T cell; Medicine; Cancer cell; Immune system; In vivo; Pharmacology; In silico; Innate immune system; In vitro; Immunology; Biology; Internal medicine; Biochemistry","score_opus":0.3306226409225515,"score_gpt":0.574342886797812,"score_spread":0.24372024587526048,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2567870461","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9152278,0.03897189,0.01716676,0.0017718115,0.0005436367,0.0012401566,0.0051004547,0.00054125336,0.019436276],"genre_scores_gemma":[0.9437552,0.019877655,0.01655582,0.00086967705,0.00017586809,0.0003534371,0.0036958153,0.000060182512,0.014656263],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992824,0.00001643547,0.000005140328,0.000010596065,0.000022545384,0.000017052445],"domain_scores_gemma":[0.99993765,0.0000060976686,0.000012716307,0.0000049038963,0.000010385886,0.000028196971],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017329198,0.00047308684,0.0002803379,0.0004267207,0.00011139978,0.0002254503,0.00028738758,0.00027651963,0.005233658],"category_scores_gemma":[0.000098295015,0.00013237467,0.00032735203,0.00022239368,0.00011046761,0.00018457712,0.00017940835,0.00063023955,0.0010843152],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007471667,0.00065575616,0.0006306814,0.00049435446,0.000060830796,0.0001968493,0.00004582458,0.0015463395,0.9286815,0.00060809223,0.0023439417,0.063988715],"study_design_scores_gemma":[0.000827502,0.01699091,0.004243146,0.0001263027,0.00018045017,0.00091373076,0.00004047705,0.0023389454,0.91316295,0.00028052143,0.060862165,0.00003287602],"about_ca_topic_score_codex":0.00048988935,"about_ca_topic_score_gemma":0.00087510614,"teacher_disagreement_score":0.005233658,"about_ca_system_score_codex":0.00019746348,"about_ca_system_score_gemma":0.00036383644,"threshold_uncertainty_score":0.017508268},"labels":[],"label_agreement":null},{"id":"W2568278621","doi":"10.1038/srep39692","title":"TRIM14 is a Putative Tumor Suppressor and Regulator of Innate Immune Response in Non-Small Cell Lung Cancer","year":2017,"lang":"en","type":"article","venue":"Scientific Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; University Health Network","funders":"Canadian Cancer Society Research Institute; Canadian Institutes of Health Research; Terry Fox Foundation; Princess Margaret Cancer Foundation","keywords":"Suppressor; Regulator; Innate immune system; Immune system; Lung cancer; Cancer research; Biology; Immunology; Master regulator; Cancer; Medicine; Oncology; Transcription factor; Genetics; Gene","score_opus":0.010647131283760207,"score_gpt":0.27205251247751394,"score_spread":0.2614053811937537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2568278621","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9680647,0.02027104,0.0055172886,0.00031509227,0.000091850074,0.00009262513,0.0029530947,0.00023666148,0.0024576345],"genre_scores_gemma":[0.98272,0.0040838947,0.00397175,0.00022336999,0.00006082522,0.00005742714,0.0059083086,0.000023870938,0.0029506714],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982506,0.000025402735,0.000023642348,0.000048973463,0.00005141207,0.000025618678],"domain_scores_gemma":[0.99981767,0.00002150227,0.00006455707,0.000017315699,0.000037815193,0.00004117684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030758732,0.00025520902,0.00036210334,0.0006131609,0.0003108004,0.0003717037,0.00027217148,0.00033276316,0.0012458076],"category_scores_gemma":[0.00030491402,0.00015012271,0.00034507466,0.00045342356,0.000187321,0.00018177548,0.00033498363,0.00034336775,0.00078420405],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061346043,0.000056974575,0.018745698,0.0003783156,0.000075489996,0.0005034971,0.000056772104,0.00028965826,0.9516485,0.00034404921,0.0010969896,0.026190655],"study_design_scores_gemma":[0.000086188855,0.001024557,0.4093674,0.00011911417,0.00029130353,0.005432381,0.00024918604,0.0068983743,0.5466275,0.0012201188,0.02863968,0.000044098142],"about_ca_topic_score_codex":0.000369636,"about_ca_topic_score_gemma":0.00053288636,"teacher_disagreement_score":0.0012458076,"about_ca_system_score_codex":0.00034088502,"about_ca_system_score_gemma":0.00031566163,"threshold_uncertainty_score":0.0041676164},"labels":[],"label_agreement":null},{"id":"W2571550534","doi":"10.71781/29743","title":"Le rôle de la PI3-kinase dans le phénotype invasif et motile des cellules MSV-MDCK-INV","year":2003,"lang":"fr","type":"dissertation","venue":"Open MIND","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Molecular biology; Phenotype; Biology; Cell biology; Genetics; Gene","score_opus":0.020783696977955218,"score_gpt":0.2967012775396936,"score_spread":0.2759175805617384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2571550534","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.54708,0.24681114,0.020794012,0.026315577,0.0022421994,0.00015137735,0.005621694,0.00053822977,0.15044577],"genre_scores_gemma":[0.6666347,0.08554986,0.010333693,0.0005823777,0.00029689792,0.00009353281,0.0026118462,0.000166347,0.23373084],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998994,0.000010617,0.000003847915,0.000019279543,0.0000352963,0.00003158944],"domain_scores_gemma":[0.99982846,0.000030275627,0.000014993141,0.000011750374,0.00006954617,0.000045020297],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046115616,0.00034104916,0.00026794404,0.00068084657,0.00091291766,0.0015840402,0.00027231217,0.0003546312,0.007050727],"category_scores_gemma":[0.0003702881,0.00018216656,0.00024670942,0.0007046927,0.00045006818,0.0006222062,0.00031821974,0.00081629073,0.0010571671],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013656383,0.00011373744,0.005449633,0.0008454502,0.000054488566,0.00077561015,0.00116294,0.0018112952,0.6950252,0.047170904,0.027279506,0.21894558],"study_design_scores_gemma":[0.00008378999,0.00013616565,0.10169071,0.0002993966,0.00008938285,0.0007805764,0.00072796235,0.002030181,0.38086292,0.0084481,0.5047672,0.000083656574],"about_ca_topic_score_codex":0.06533641,"about_ca_topic_score_gemma":0.08197012,"teacher_disagreement_score":0.06533641,"about_ca_system_score_codex":0.0049741417,"about_ca_system_score_gemma":0.0030093247,"threshold_uncertainty_score":0.1299122},"labels":[],"label_agreement":null},{"id":"W2573402898","doi":"10.1212/wnl.86.16_supplement.p5.333","title":"CNS Inflammasome Activation and Modulation in Multiple Sclerosis (P5.333)","year":2016,"lang":"en","type":"article","venue":"Neurology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Inflammasome; Multiple sclerosis; Medicine; Internal medicine; Neuroscience; Immunology; Inflammation; Psychology","score_opus":0.027286553441094694,"score_gpt":0.21603623168244876,"score_spread":0.18874967824135408,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2573402898","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99219525,0.0057817018,0.0005755965,0.00011657014,0.000025211504,0.000034053468,0.0002534935,0.000025044881,0.0009930674],"genre_scores_gemma":[0.9949066,0.0025780464,0.000654618,0.00006441837,0.00002030328,0.000054006505,0.00036159303,0.0000038523253,0.001356547],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99991417,0.000012016229,0.000009411341,0.000019054432,0.000025406793,0.000020002704],"domain_scores_gemma":[0.999956,0.0000040531286,0.00002051327,0.000002155279,0.0000062930126,0.000010903424],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015140227,0.00032559846,0.00024538866,0.00022319792,0.00018081264,0.00023339738,0.00010024593,0.00033970832,0.0014357967],"category_scores_gemma":[0.00009495183,0.000073416595,0.00021472614,0.00022864027,0.00025694494,0.00025309628,0.00015462014,0.00042939917,0.0004688254],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010349961,0.0001509264,0.0021350025,0.00021816092,0.000012806715,0.00063042366,0.00005957502,0.00006395308,0.99082536,0.00006829645,0.0001380653,0.0046624113],"study_design_scores_gemma":[0.0003733068,0.010008469,0.20215449,0.00014645752,0.00018350541,0.011327987,0.0006117748,0.00093177694,0.7641894,0.00052179396,0.009527761,0.000023235461],"about_ca_topic_score_codex":0.00031910563,"about_ca_topic_score_gemma":0.00045898772,"teacher_disagreement_score":0.0014357967,"about_ca_system_score_codex":0.00021118025,"about_ca_system_score_gemma":0.00015391363,"threshold_uncertainty_score":0.0048031807},"labels":[],"label_agreement":null},{"id":"W2575503691","doi":"10.1128/jvi.02414-16","title":"Herpes Simplex Virus 1 Abrogates the cGAS/STING-Mediated Cytosolic DNA-Sensing Pathway via Its Virion Host Shutoff Protein, UL41","year":2017,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":171,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Priority Academic Program Development of Jiangsu Higher Education Institutions; National Natural Science Foundation of China","keywords":"Biology; Herpes simplex virus; Stimulator of interferon genes; Interferon; DNA virus; Interferon type I; Innate immune system; Virus; DNA; RIG-I; Virology; Viral replication; Cell biology; Gene; Immune system; Genetics","score_opus":0.01907419750152635,"score_gpt":0.26243246012486665,"score_spread":0.24335826262334032,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2575503691","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99551326,0.0016320411,0.0016006471,0.00006661521,0.000048433893,0.000023937015,0.00032467447,0.00011288174,0.000677555],"genre_scores_gemma":[0.9961874,0.0005868658,0.001282268,0.000024203795,0.00000982847,0.00003510077,0.00048479243,0.000019837287,0.0013697196],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979264,0.000037359157,0.000029034249,0.000036453384,0.000049495295,0.000055034936],"domain_scores_gemma":[0.99988985,0.000021945942,0.000037876463,0.000015869133,0.000007662381,0.000026796266],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014603528,0.00053610926,0.00031271775,0.0002467927,0.00016340376,0.00037035748,0.00030149895,0.0002602539,0.0009543929],"category_scores_gemma":[0.00010625891,0.0001494805,0.00029942358,0.00018455478,0.00030346456,0.00027631197,0.0002355498,0.00059257075,0.00028539],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007816239,0.000031974152,0.000042165568,0.0000337203,0.000003202403,0.000020988728,0.000010253955,0.000043435644,0.9991749,0.000113377995,0.000023207778,0.00042457005],"study_design_scores_gemma":[0.000010409965,0.000217341,0.00073407625,0.000004267823,0.000009303433,0.000074565185,0.000014259804,0.00078221865,0.9970118,0.000026537211,0.0011121025,0.0000031922232],"about_ca_topic_score_codex":0.00043597704,"about_ca_topic_score_gemma":0.00040032456,"teacher_disagreement_score":0.0009543929,"about_ca_system_score_codex":0.0003561713,"about_ca_system_score_gemma":0.00024738166,"threshold_uncertainty_score":0.0031927228},"labels":[],"label_agreement":null},{"id":"W2577626296","doi":"10.1128/jvi.00025-17","title":"Herpes Simplex Virus 1 UL24 Abrogates the DNA Sensing Signal Pathway by Inhibiting NF-κB Activation","year":2017,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":117,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Institut National de la Recherche Scientifique","funders":"Priority Academic Program Development of Jiangsu Higher Education Institutions; National Natural Science Foundation of China","keywords":"Biology; Herpes simplex virus; Promoter; Transcription (linguistics); DNA; Transcription factor; Molecular biology; Innate immune system; Gene; Immune system; Virus; Gene expression; Virology; Genetics","score_opus":0.015744999855763126,"score_gpt":0.26290357276243576,"score_spread":0.24715857290667262,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2577626296","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942517,0.0024814035,0.0016910401,0.00006550502,0.00007153489,0.00003323384,0.00034505737,0.00012656178,0.00093381654],"genre_scores_gemma":[0.9957765,0.00088607194,0.0011771607,0.000026228392,0.000014153557,0.000046639772,0.00054227,0.000022975877,0.001508073],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983096,0.00003211198,0.000024945854,0.00002469323,0.000039773593,0.000047544545],"domain_scores_gemma":[0.9998882,0.000023750825,0.000033775985,0.000022812907,0.0000084289595,0.000023101109],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011162381,0.00058352563,0.00032252967,0.00023746904,0.00015870671,0.00030797816,0.0003613621,0.0002243862,0.0016901997],"category_scores_gemma":[0.00014162618,0.00014807237,0.00035865352,0.0001783463,0.00029950181,0.00019674875,0.00017631962,0.00050330657,0.0004772832],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016820095,0.00007438972,0.00004525388,0.000047254154,0.0000075474873,0.000031483214,0.000009061374,0.000077993514,0.9986129,0.000115246505,0.00003495239,0.00077579106],"study_design_scores_gemma":[0.000019513114,0.00034311914,0.0006423513,0.0000049762443,0.000011086832,0.00010108302,0.000010087669,0.0005181248,0.9966007,0.000036893744,0.0017079428,0.0000042316456],"about_ca_topic_score_codex":0.00031411886,"about_ca_topic_score_gemma":0.00022238072,"teacher_disagreement_score":0.0016901997,"about_ca_system_score_codex":0.00028542185,"about_ca_system_score_gemma":0.00017972579,"threshold_uncertainty_score":0.005654335},"labels":[],"label_agreement":null},{"id":"W2581094488","doi":"10.1128/jvi.02484-16","title":"Suppression of Type I Interferon Signaling by E1A via RuvBL1/Pontin","year":2017,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada; Research Manitoba","keywords":"Biology; Interferon; Signal transduction; Cell biology; Cancer research; Virology","score_opus":0.01303467230237349,"score_gpt":0.2773706073670317,"score_spread":0.2643359350646582,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2581094488","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99093974,0.0021246283,0.004538858,0.00019096542,0.000035551453,0.000028852124,0.00018482404,0.00010501742,0.0018516596],"genre_scores_gemma":[0.99523866,0.0004102895,0.0014702501,0.000053909243,0.000009224024,0.00001953268,0.00023871411,0.000011177687,0.0025483232],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999093,0.000016137697,0.0000061937058,0.000021889595,0.000021199965,0.000025296227],"domain_scores_gemma":[0.99990964,0.000020157573,0.00002965032,0.000009379114,0.000009926718,0.000021244801],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001390191,0.00022206652,0.00016357635,0.00015594398,0.00015245372,0.00031330384,0.0002958815,0.00023116522,0.001357724],"category_scores_gemma":[0.000111165995,0.00008691239,0.00018338773,0.000066899236,0.00020276083,0.00016754998,0.00016985054,0.00052900205,0.0003484061],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000094034614,0.000032608135,0.00020205374,0.000031799624,0.0000041489343,0.00005392672,0.000005980582,0.00006826559,0.99770737,0.00026718315,0.00005414511,0.0014784957],"study_design_scores_gemma":[0.000027844344,0.00019909337,0.0030736097,0.000004587025,0.000008580143,0.00027726655,0.000013442577,0.0017854138,0.9901058,0.00008141699,0.004417975,0.000004883263],"about_ca_topic_score_codex":0.00029862137,"about_ca_topic_score_gemma":0.00028361718,"teacher_disagreement_score":0.001357724,"about_ca_system_score_codex":0.0003412643,"about_ca_system_score_gemma":0.00013272313,"threshold_uncertainty_score":0.0045420527},"labels":[],"label_agreement":null},{"id":"W2585493620","doi":"10.1038/cdd.2016.121","title":"Autophagy regulates MAVS signaling activation in a phosphorylation-dependent manner in microglia","year":2016,"lang":"en","type":"article","venue":"Cell Death and Differentiation","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":80,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Ottawa Mental Health Centre; University of Ottawa","funders":"National Cancer Institute; National Natural Science Foundation of China; Fourth Military Medical University; Zhejiang University; Chinese Academy of Sciences; Institute of Zoology, Chinese Academy of Sciences","keywords":"Autophagy; Cell biology; Phosphorylation; Microglia; Signal transduction; Biology; Tyrosine phosphorylation; Kinase; Inflammation; Chemistry; Immunology; Apoptosis; Biochemistry","score_opus":0.008797650812521788,"score_gpt":0.21093671898085717,"score_spread":0.20213906816833538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2585493620","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904259,0.0043851845,0.0013079563,0.0003666699,0.00014298313,0.000019262745,0.0006436699,0.00007143082,0.0026368743],"genre_scores_gemma":[0.99577063,0.0010482784,0.00045096752,0.000083898114,0.00004061883,0.000039175786,0.0004036522,0.000017024351,0.0021457246],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996469,0.000045610213,0.00002612957,0.000050913324,0.000050747927,0.00017970335],"domain_scores_gemma":[0.9999013,0.0000059811887,0.00003395231,0.000011645647,0.000017074735,0.000030098474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016482937,0.0003554622,0.00034248325,0.00041600937,0.0005834359,0.00052521797,0.00026038918,0.0004726879,0.0024137257],"category_scores_gemma":[0.00016632068,0.00021036394,0.0007013297,0.00020311802,0.000361094,0.0005193581,0.00035343875,0.00081293687,0.0007134553],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014374738,0.00004583346,0.0010513616,0.00012408065,0.000028585126,0.00019146406,0.00006219835,0.00008584117,0.9937925,0.00051112956,0.00033188768,0.0023376516],"study_design_scores_gemma":[0.00016271112,0.0004012353,0.10395017,0.00008966946,0.00014575764,0.0010221626,0.0007143794,0.0023052578,0.8807275,0.0017957853,0.008647339,0.000038117952],"about_ca_topic_score_codex":0.00062620285,"about_ca_topic_score_gemma":0.0016609115,"teacher_disagreement_score":0.0024137257,"about_ca_system_score_codex":0.0006002417,"about_ca_system_score_gemma":0.00040035966,"threshold_uncertainty_score":0.008074701},"labels":[],"label_agreement":null},{"id":"W2587795232","doi":"10.1089/jir.2016.0117","title":"Interferon-Stimulated Gene Expression as a Preferred Biomarker for Disease Activity in Aicardi–Goutières Syndrome","year":2017,"lang":"en","type":"article","venue":"Journal of Interferon & Cytokine Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University Health Network; University of Toronto","funders":"","keywords":"ISG15; Biomarker; Gene; Mutation; Erythrocyte sedimentation rate; Interferon; Medicine; Immunology; Disease; Biology; Pathology; Internal medicine; Genetics","score_opus":0.10162127692357689,"score_gpt":0.4080822468508336,"score_spread":0.3064609699272567,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2587795232","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986141,0.0005438996,0.00038163117,0.000029073046,0.0000080661275,0.000008206515,0.000050000763,0.000010104666,0.00035485433],"genre_scores_gemma":[0.9990042,0.00014540968,0.0006450907,0.000033427168,0.00001302474,0.000009019307,0.0000700891,0.0000029583703,0.000076909935],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99968016,0.00013318234,0.000051438306,0.000051620133,0.00005041873,0.000033120512],"domain_scores_gemma":[0.99944216,0.00022012302,0.0001434183,0.000034431487,0.00006637786,0.00009351499],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000558939,0.00040479895,0.0004222188,0.0012896752,0.00016888691,0.00040794435,0.00015280738,0.0005130307,0.00035596458],"category_scores_gemma":[0.0011982146,0.000095917836,0.00015163358,0.00057383126,0.00041291892,0.00021852566,0.00019581169,0.0004659875,0.00010327412],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00173538,0.000091854585,0.74157125,0.000072498144,0.00005979047,0.0060984036,0.0004950734,0.00026698035,0.23972358,0.000096747695,0.0001239126,0.009664498],"study_design_scores_gemma":[0.00005723733,0.0010733161,0.94002306,0.000037292808,0.00009949103,0.020137178,0.00041734014,0.0019998844,0.03502982,0.00022360882,0.00087858154,0.000023277384],"about_ca_topic_score_codex":0.0002996092,"about_ca_topic_score_gemma":0.0003342601,"teacher_disagreement_score":0.0012896752,"about_ca_system_score_codex":0.00019559654,"about_ca_system_score_gemma":0.00008939545,"threshold_uncertainty_score":0.0029560328},"labels":[],"label_agreement":null},{"id":"W2590198289","doi":"10.1186/s12985-017-0709-5","title":"Herpes simplex virus 1 infection dampens the immediate early antiviral innate immunity signaling from peroxisomes by tegument protein VP16","year":2017,"lang":"en","type":"article","venue":"Virology Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Soochow University; National Natural Science Foundation of China","keywords":"Viral tegument; Biology; Virology; Herpes simplex virus; Innate immune system; Immunology; Immunity; Viral shedding; Virus; Immune system","score_opus":0.014642128238018732,"score_gpt":0.2604413393138355,"score_spread":0.2457992110758168,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2590198289","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9890644,0.006208329,0.0014740829,0.00017422934,0.00013776131,0.00003574451,0.0006923428,0.00014062719,0.002072522],"genre_scores_gemma":[0.99203897,0.0023383477,0.001154358,0.00008439099,0.000021928814,0.000065009444,0.0008407946,0.000020069405,0.0034361454],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998815,0.000015680427,0.000013278546,0.00002664587,0.000027670221,0.000035311863],"domain_scores_gemma":[0.9999274,0.000011218872,0.000020372414,0.000009263275,0.000009497564,0.000022231277],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010037613,0.00035514036,0.00031251987,0.00014882996,0.0001219467,0.00034073245,0.00016892893,0.00023947466,0.0022451868],"category_scores_gemma":[0.00011796812,0.00011995824,0.00027379816,0.000095961936,0.00023412131,0.0002753576,0.00021380212,0.0007342306,0.00046191574],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030305708,0.000038866587,0.00025069338,0.00009825752,0.0000064647916,0.000023308512,0.000011349721,0.000039222334,0.9975815,0.000079443445,0.00009462851,0.001473283],"study_design_scores_gemma":[0.00002977469,0.00044051022,0.008159344,0.000021517117,0.000020567366,0.0001695305,0.00005384029,0.0006591928,0.98702,0.00009976921,0.0033202323,0.000005685749],"about_ca_topic_score_codex":0.00028393723,"about_ca_topic_score_gemma":0.000314764,"teacher_disagreement_score":0.0022451868,"about_ca_system_score_codex":0.00024087496,"about_ca_system_score_gemma":0.00024421883,"threshold_uncertainty_score":0.0075109005},"labels":[],"label_agreement":null},{"id":"W2590338604","doi":"10.1101/109769","title":"Gene knockout shows that PML (TRIM19) does not restrict the early stages of HIV-1 infection in human cell lines","year":2017,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Trois-Rivières","funders":"","keywords":"Biology; Promyelocytic leukemia protein; Permissiveness; Cell culture; Virology; Gene; Arsenic trioxide; RNA interference; Acute promyelocytic leukemia; Virus; Viral replication; Genetics; Retinoic acid; Apoptosis; RNA","score_opus":0.02212598963732746,"score_gpt":0.24632035490094,"score_spread":0.22419436526361256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2590338604","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95545304,0.0050321827,0.017501324,0.0006907371,0.00022368135,0.00018352242,0.009274231,0.0010622777,0.010579016],"genre_scores_gemma":[0.96661884,0.0020696844,0.0073172213,0.0002559132,0.000018258159,0.00011641824,0.007496719,0.00016310874,0.015943909],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997104,0.00002300046,0.00003988095,0.00007803584,0.000091261245,0.000057396865],"domain_scores_gemma":[0.99982613,0.000027178643,0.000032577813,0.000049834525,0.000018596866,0.000045770783],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023682124,0.0003031011,0.00033529225,0.0003684472,0.00024940367,0.0006029788,0.00035975053,0.0005540713,0.005371577],"category_scores_gemma":[0.0001601515,0.00024980586,0.00044264886,0.00025434064,0.00027875928,0.00018454545,0.00021382229,0.0010486336,0.002275219],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000080685146,0.000040712475,0.00015146195,0.000043198892,0.0000140089205,0.00012716455,0.00002289203,0.000059161717,0.99722713,0.0002749032,0.00033509242,0.0016235552],"study_design_scores_gemma":[0.00002996014,0.0001917704,0.0022014661,0.000012923836,0.000037961905,0.0008208852,0.00003424157,0.00066036487,0.98219246,0.000095005606,0.013716904,0.000006136518],"about_ca_topic_score_codex":0.0014210497,"about_ca_topic_score_gemma":0.001387518,"teacher_disagreement_score":0.005371577,"about_ca_system_score_codex":0.0003171034,"about_ca_system_score_gemma":0.0003293018,"threshold_uncertainty_score":0.017969668},"labels":[],"label_agreement":null},{"id":"W2592370523","doi":"10.1186/s12867-017-0084-1","title":"Properties of STAT1 and IRF1 enhancers and the influence of SNPs","year":2017,"lang":"en","type":"article","venue":"BMC Molecular Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Lunenfeld-Tanenbaum Research Institute; Dalhousie University","funders":"Canadian Cancer Society Research Institute; Canadian Institutes of Health Research; Krembil Foundation","keywords":"In silico; Biology; IRF1; Enhancer; Single-nucleotide polymorphism; SNP; Genetics; STAT1; Gene; Computational biology; Transcription factor; Genotype","score_opus":0.011833386324644831,"score_gpt":0.2595952327562844,"score_spread":0.24776184643163954,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2592370523","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9761302,0.0005267288,0.021066818,0.00003583722,0.000009759358,0.000015047503,0.0011480943,0.00021592542,0.00085167954],"genre_scores_gemma":[0.9916837,0.00008802133,0.0064575607,0.000022706714,0.000005072804,0.000014968441,0.0014787503,0.00004931638,0.00019993812],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99958247,0.00010978745,0.000029328896,0.00014944983,0.00008543253,0.000043523953],"domain_scores_gemma":[0.9986124,0.001012566,0.00017283391,0.0000868308,0.00005196685,0.00006331689],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00085063506,0.0004079922,0.00036593172,0.0005300162,0.000182448,0.00036997953,0.0002663062,0.0003466065,0.0022972375],"category_scores_gemma":[0.0010554303,0.0002821535,0.00066738826,0.00033804533,0.00031900464,0.00016823884,0.0002292598,0.00050353614,0.0005621205],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015922401,0.00008652721,0.06542825,0.00028337835,0.00018072416,0.00029089386,0.00012821559,0.018898062,0.89354295,0.0011901457,0.00017538854,0.018203126],"study_design_scores_gemma":[0.00011117727,0.00071718794,0.21040756,0.000053430602,0.00045307298,0.0016483223,0.00011062297,0.1389245,0.6408061,0.0038384483,0.0028541877,0.000075505464],"about_ca_topic_score_codex":0.0005321986,"about_ca_topic_score_gemma":0.0008458973,"teacher_disagreement_score":0.0022972375,"about_ca_system_score_codex":0.0002248505,"about_ca_system_score_gemma":0.00013549856,"threshold_uncertainty_score":0.0076850653},"labels":[],"label_agreement":null},{"id":"W2592412207","doi":"10.1038/s41598-017-00151-6","title":"The dynamic interacting landscape of MAPL reveals essential functions for SUMOylation in innate immunity","year":2017,"lang":"en","type":"article","venue":"Scientific Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; McGill University; Princess Margaret Cancer Centre; Montreal Neurological Institute and Hospital","funders":"Canadian Institutes of Health Research; Fonds de Recherche du Québec - Santé; Azrieli Foundation; Israel Science Foundation; International Development Research Centre","keywords":"Innate immune system; RIG-I; Biology; MDA5; Cell biology; Sendai virus; SUMO protein; RNA silencing; Ubiquitin ligase; Gene silencing; Acquired immune system; Ubiquitin; Virus; RNA interference; Immune system; Virology; Genetics; RNA; Gene","score_opus":0.014124524620245375,"score_gpt":0.2949548747435635,"score_spread":0.28083035012331814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2592412207","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969079,0.00048014394,0.0014799112,0.000091293135,0.0000040354284,0.000002872599,0.00018500838,0.000024344405,0.00082457485],"genre_scores_gemma":[0.9981833,0.0002324418,0.0007539289,0.000029259365,0.000002808346,0.0000040144955,0.00027518618,0.000009215644,0.0005097426],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99996364,0.0000039030033,0.0000018341992,0.000009275146,0.000011071505,0.000010311543],"domain_scores_gemma":[0.99995613,0.0000064395886,0.000013333203,0.000005899844,0.000004783798,0.000013359869],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007437508,0.00015114134,0.000091973896,0.00019027374,0.00014092473,0.00027390075,0.00011517869,0.00015722639,0.001069377],"category_scores_gemma":[0.00009903178,0.0000950397,0.00012761149,0.00013329106,0.00016424495,0.00029445082,0.00021367657,0.00023930965,0.00032887165],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020961153,0.000009044874,0.0016443031,0.000021438116,0.000005216024,0.00012877648,0.000020199144,0.000106303785,0.9958216,0.00023346243,0.00004812943,0.0017518653],"study_design_scores_gemma":[0.000015399277,0.000096467586,0.056478787,0.0000072944435,0.000023995764,0.0011572695,0.00013561701,0.005265074,0.9308909,0.00083767145,0.0050801164,0.00001135258],"about_ca_topic_score_codex":0.0001818906,"about_ca_topic_score_gemma":0.00031399878,"teacher_disagreement_score":0.001069377,"about_ca_system_score_codex":0.00031685864,"about_ca_system_score_gemma":0.00007832069,"threshold_uncertainty_score":0.0035774112},"labels":[],"label_agreement":null},{"id":"W2594870910","doi":"10.1101/gad.289769.116","title":"A prosurvival DNA damage-induced cytoplasmic interferon response is mediated by end resection factors and is limited by Trex1","year":2017,"lang":"en","type":"article","venue":"Genes & Development","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":218,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"BC Cancer Agency; National Institute for Health and Care Research; Cancer Research UK; Wellcome Trust; Medical Research Council; Wellcome; Breast Cancer Research Foundation","keywords":"Biology; DNA damage; Cytoplasm; Cell biology; Interferon; DNA; Cancer research; Virology; Genetics","score_opus":0.02224983601599884,"score_gpt":0.2604270560410255,"score_spread":0.23817722002502667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2594870910","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97145665,0.011628653,0.012067975,0.00024083181,0.000045466335,0.000031129843,0.00043692993,0.00018203782,0.003910154],"genre_scores_gemma":[0.99231154,0.0016373358,0.0022180704,0.000058691945,0.00001550638,0.000026846155,0.0004812163,0.00001993443,0.0032308581],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998559,0.000023949666,0.000009814425,0.0000479489,0.000031446612,0.00003096085],"domain_scores_gemma":[0.99985313,0.0000249609,0.000059340426,0.000018743765,0.000018400731,0.000025409458],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015477414,0.0003331765,0.00027085101,0.00014589916,0.00013816777,0.00030990888,0.00010900475,0.00018834398,0.0017262009],"category_scores_gemma":[0.00013497398,0.000095158044,0.00022465228,0.000063673564,0.00019575773,0.00025944354,0.00022933958,0.0004019741,0.00046520508],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045131623,0.0000053362182,0.00019681481,0.000023638788,0.0000023029168,0.000028964314,0.0000064206934,0.000019869973,0.99821705,0.00009157733,0.00002137339,0.0013415597],"study_design_scores_gemma":[0.000011073622,0.00021756359,0.010345906,0.000016239694,0.000010274609,0.0005904096,0.00003633915,0.00077561114,0.98367184,0.000118455246,0.0042012837,0.0000050573763],"about_ca_topic_score_codex":0.00012267739,"about_ca_topic_score_gemma":0.00017867496,"teacher_disagreement_score":0.0017262009,"about_ca_system_score_codex":0.00022691762,"about_ca_system_score_gemma":0.00013541382,"threshold_uncertainty_score":0.0057747364},"labels":[],"label_agreement":null},{"id":"W2597176252","doi":"10.1074/jbc.r117.777102","title":"Contribution of type III interferons to antiviral immunity: location, location, location","year":2017,"lang":"en","type":"review","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":152,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Immunity; Interferon; Virology; Biology; Computational biology; Chemistry; Immunology; Immune system","score_opus":0.06297228565849809,"score_gpt":0.3489741673229025,"score_spread":0.2860018816644044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2597176252","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016108558,0.9978928,0.00017863157,0.000304657,0.00030990568,0.000002776117,0.000008914849,0.0000055978967,0.0011356571],"genre_scores_gemma":[0.0010110323,0.99749917,0.00016101373,0.00014249526,0.00033555581,0.000004664337,0.000017951908,0.0000014555217,0.00082661037],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99988294,0.000016744876,0.000016443222,0.000024413379,0.000044250195,0.000015177357],"domain_scores_gemma":[0.9998068,0.000060463648,0.000032721004,0.000008044523,0.00005616312,0.000035754685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003633846,0.0006284644,0.0008738168,0.0012917713,0.00026387203,0.0010847559,0.00072112976,0.00086351525,0.0024657054],"category_scores_gemma":[0.00037110585,0.00023611757,0.00020566375,0.0014151206,0.00062285055,0.0014312385,0.00068983535,0.0014075561,0.0015940124],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006630766,0.0000357147,0.00021169333,0.008243465,0.000039029506,0.00020511312,0.000075934644,0.00034606984,0.0046260576,0.00878572,0.025874041,0.95149076],"study_design_scores_gemma":[0.000007942476,0.000040327912,0.0006678452,0.0013547916,0.00003258369,0.0010733858,0.00006526219,0.00010023417,0.0008084628,0.0035780692,0.9922575,0.000013642451],"about_ca_topic_score_codex":0.00044878677,"about_ca_topic_score_gemma":0.00070517836,"teacher_disagreement_score":0.0024657054,"about_ca_system_score_codex":0.00071446603,"about_ca_system_score_gemma":0.00087803154,"threshold_uncertainty_score":0.008248568},"labels":[],"label_agreement":null},{"id":"W2598458592","doi":"10.1158/1538-7445.am2017-326","title":"Abstract 326: Baseline IL-17 receptor signaling is essential for controlling aberrant JNK-dependent cellular proliferation via maintenance of endogenous level of ubiquitin-editing enzyme A20","year":2017,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Downregulation and upregulation; Gene knockdown; Cancer research; Biology; Cell growth; Signal transduction; Small hairpin RNA; Cell biology; Cell culture; Biochemistry","score_opus":0.14435837372062463,"score_gpt":0.36805693997169175,"score_spread":0.22369856625106713,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2598458592","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9900226,0.0019226122,0.0037706876,0.00012928,0.000055022123,0.000024022924,0.002887288,0.00018100464,0.0010075325],"genre_scores_gemma":[0.9925748,0.000768157,0.0018079033,0.00007956933,0.000017190163,0.00002918445,0.0028432494,0.00005866481,0.0018212602],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998035,0.00001963629,0.000022269918,0.00006654983,0.000056070297,0.000032075255],"domain_scores_gemma":[0.99982387,0.000015116689,0.00007946909,0.000020496303,0.000021399834,0.000039638315],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012262125,0.00031036837,0.00025031558,0.00018790113,0.00018467096,0.0004323534,0.00014039481,0.00018413767,0.0027140572],"category_scores_gemma":[0.00012185428,0.0001307976,0.0003043059,0.00017759843,0.000204942,0.00018888821,0.00021911798,0.0004737378,0.0011716043],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009160663,0.000008811854,0.0004083482,0.000037770802,0.000006614196,0.000031615262,0.0000059970366,0.0000391807,0.99856025,0.000033397468,0.000046619196,0.00072978466],"study_design_scores_gemma":[0.00001531711,0.00014091855,0.008849144,0.000010614729,0.000027592498,0.00048568702,0.000028631768,0.000901487,0.9851071,0.00005909117,0.004368052,0.0000063563048],"about_ca_topic_score_codex":0.00046099286,"about_ca_topic_score_gemma":0.00047575994,"teacher_disagreement_score":0.0027140572,"about_ca_system_score_codex":0.00027438326,"about_ca_system_score_gemma":0.00025793855,"threshold_uncertainty_score":0.009079456},"labels":[],"label_agreement":null},{"id":"W2601660331","doi":"10.1002/art.40002","title":"Expression of Cyclic GMP‐AMP Synthase in Patients With Systemic Lupus Erythematosus","year":2016,"lang":"en","type":"article","venue":"Arthritis & Rheumatology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":196,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Versus Arthritis; Prostate Cancer UK; Wellcome Trust; British Heart Foundation; Academy of Medical Sciences; Rare Disease Foundation; Lupus Research Alliance","keywords":"Peripheral blood mononuclear cell; Pathogenesis; Lupus erythematosus; Interferon; Immunology; Stimulation; Messenger RNA; Systemic lupus erythematosus; Internal medicine; Rheumatoid arthritis; Endocrinology; Medicine; Interferon type I; In vitro; Disease; Gene; Biology; Antibody; Biochemistry","score_opus":0.005283083581169447,"score_gpt":0.20436958488885018,"score_spread":0.19908650130768074,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2601660331","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983542,0.00070613396,0.00011413614,0.000062568775,0.000006989026,0.0000073488345,0.00010670452,0.0000115617695,0.00063031184],"genre_scores_gemma":[0.99950457,0.00013398156,0.0001066413,0.00002882388,0.000014364634,0.0000058974047,0.00007646879,0.0000011386624,0.00012805208],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996798,0.000083641295,0.000050806448,0.00009648029,0.000058262987,0.00003100548],"domain_scores_gemma":[0.999153,0.00025618568,0.00035133908,0.00003489946,0.0000803893,0.000124123],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032022988,0.00038876277,0.00038856233,0.0008338773,0.00037170528,0.0003677317,0.00016214968,0.00051493355,0.0026691342],"category_scores_gemma":[0.0013742677,0.00017374614,0.00017030981,0.00060636573,0.00031709013,0.00029437954,0.00021575534,0.00038801745,0.00036639057],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00079249725,0.00006276084,0.9817182,0.000059833892,0.00004044905,0.0013859761,0.00016507013,0.00006476617,0.009984716,0.000032168842,0.00017763565,0.005516051],"study_design_scores_gemma":[0.000049288912,0.00052091375,0.9837457,0.00003039708,0.000064496286,0.013068074,0.0001887051,0.00027123722,0.0013951635,0.00006415551,0.00059275073,0.000009145111],"about_ca_topic_score_codex":0.00030777563,"about_ca_topic_score_gemma":0.0003604538,"teacher_disagreement_score":0.0026691342,"about_ca_system_score_codex":0.0001693363,"about_ca_system_score_gemma":0.00012104121,"threshold_uncertainty_score":0.008929133},"labels":[],"label_agreement":null},{"id":"W2604663227","doi":"10.1016/j.antiviral.2017.04.004","title":"Herpes simplex virus type 1 abrogates the antiviral activity of Ch25h via its virion host shutoff protein","year":2017,"lang":"en","type":"article","venue":"Antiviral Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Natural Science Foundation of China; National Science Foundation","keywords":"Ectopic expression; Herpes simplex virus; Gene knockdown; Viral replication; Biology; Endonuclease; Mutant; Virology; Virus; Molecular biology; Gene; Genetics","score_opus":0.08766925390711647,"score_gpt":0.39740966022177643,"score_spread":0.30974040631465993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2604663227","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99704,0.00069969613,0.0005179828,0.000077695084,0.00004819691,0.000009991696,0.0001611316,0.000066228684,0.0013789559],"genre_scores_gemma":[0.9976332,0.00022458799,0.0002871842,0.000023107952,0.000011576702,0.000010860112,0.00023860595,0.000016260181,0.0015545951],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998472,0.000021419402,0.000008213195,0.000018310155,0.00003269269,0.000072224124],"domain_scores_gemma":[0.99988675,0.000032264772,0.00002105733,0.000019055487,0.0000052553387,0.000035621535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014839054,0.00039740567,0.00021541165,0.00024148962,0.00021339886,0.000308656,0.00026737267,0.00024413853,0.0019625889],"category_scores_gemma":[0.00011951,0.00011778502,0.00023419812,0.00013564256,0.0004123228,0.00017877073,0.0001581698,0.00071314804,0.0003817045],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041779157,0.000079456244,0.00012316662,0.000016414417,0.0000066191847,0.000051919284,0.000010221203,0.000106940555,0.9975509,0.00025863788,0.000093121445,0.0012847465],"study_design_scores_gemma":[0.00004270383,0.00037508353,0.0019265112,0.000003083779,0.000008121933,0.000074293064,0.000017097886,0.0005321298,0.9957302,0.00007490297,0.001211556,0.0000043136492],"about_ca_topic_score_codex":0.0009733527,"about_ca_topic_score_gemma":0.0011138258,"teacher_disagreement_score":0.0019625889,"about_ca_system_score_codex":0.00045594134,"about_ca_system_score_gemma":0.00030670504,"threshold_uncertainty_score":0.006565571},"labels":[],"label_agreement":null},{"id":"W2607501063","doi":"10.1371/journal.ppat.1006326","title":"RIPK3 interacts with MAVS to regulate type I IFN-mediated immunity to Influenza A virus infection","year":2017,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Necroptosis; Biology; Interferon; Immunity; Virology; Virus; RIPK1; Influenza A virus; Immunology; Immune system; Programmed cell death; Apoptosis; Genetics","score_opus":0.03328632270012622,"score_gpt":0.2880339483022265,"score_spread":0.2547476256021003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2607501063","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9856274,0.0042972537,0.0050279284,0.00033453736,0.0000791489,0.000028183591,0.0009441339,0.00025038183,0.003410859],"genre_scores_gemma":[0.99520737,0.0008361365,0.0014211264,0.00013332287,0.000014711006,0.000021756972,0.00072442996,0.00005197312,0.0015891964],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982977,0.00002443831,0.00001454468,0.000036573554,0.00003627568,0.00005842648],"domain_scores_gemma":[0.9999069,0.000010737151,0.00003191392,0.000011100849,0.0000099124245,0.000029372484],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016321878,0.00034130758,0.00022646353,0.00024066605,0.00035421576,0.00048176476,0.000285396,0.0002744416,0.0016143534],"category_scores_gemma":[0.0001753885,0.0001871887,0.0005495973,0.00017224047,0.00027121717,0.00033985652,0.0004973846,0.00067249057,0.0011387343],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000301528,0.000017175853,0.0008154251,0.00006423189,0.000011461908,0.0001465558,0.000020718466,0.00013464502,0.99709344,0.00018043682,0.00014564124,0.0010687221],"study_design_scores_gemma":[0.0000631127,0.00017371334,0.053993598,0.00003197621,0.000048845584,0.0012438543,0.00013551135,0.005622259,0.9307621,0.0006052634,0.007285673,0.00003413632],"about_ca_topic_score_codex":0.0004500071,"about_ca_topic_score_gemma":0.00074595254,"teacher_disagreement_score":0.0016143534,"about_ca_system_score_codex":0.0006520787,"about_ca_system_score_gemma":0.0002931237,"threshold_uncertainty_score":0.005400598},"labels":[],"label_agreement":null},{"id":"W2607777542","doi":"","title":"Impact of SOCS2 on plasmacytoid DC biology and interferon response","year":2010,"lang":"en","type":"article","venue":"Research Portal (Queen's University Belfast)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Interferon γ; Biology; Interferon; Immunology; Virology; Medicine; Interferon gamma; Immune system","score_opus":0.01833904906501007,"score_gpt":0.31723316702259435,"score_spread":0.2988941179575843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2607777542","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9776562,0.0062531205,0.0010560738,0.0012131243,0.00028342017,0.00003820692,0.0014518623,0.00015030385,0.011897687],"genre_scores_gemma":[0.99373794,0.000564442,0.00033185488,0.0001839183,0.000042431875,0.000015731674,0.00064533425,0.000034019293,0.0044443873],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99956006,0.00008323901,0.000021476526,0.00005334673,0.00006377044,0.00021810085],"domain_scores_gemma":[0.99973744,0.000052555893,0.000038503807,0.000025376587,0.00003742256,0.000108679116],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044248247,0.00035997506,0.00041399218,0.00023605252,0.00035504525,0.0011640105,0.00018259978,0.00043404524,0.010316997],"category_scores_gemma":[0.00038304867,0.00016010905,0.0003366372,0.0001254126,0.0003806826,0.00045860352,0.00059101055,0.0007123116,0.0015676924],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0059405994,0.000095612246,0.0024197665,0.00026162463,0.00002823122,0.00024104178,0.000078216835,0.00039686757,0.97647774,0.0012220378,0.00149696,0.011341174],"study_design_scores_gemma":[0.00082190544,0.0027613488,0.09013156,0.0001096976,0.000110741894,0.0011396594,0.00081329263,0.0045779445,0.8591391,0.0023840119,0.03794347,0.00006735168],"about_ca_topic_score_codex":0.0009217963,"about_ca_topic_score_gemma":0.0016081556,"teacher_disagreement_score":0.010316997,"about_ca_system_score_codex":0.000713893,"about_ca_system_score_gemma":0.00059860485,"threshold_uncertainty_score":0.03451377},"labels":[],"label_agreement":null},{"id":"W2610461060","doi":"10.1111/tra.12480","title":"Importin β1 targeting by hepatitis C virus <scp>NS3</scp>/<scp>4A</scp> protein restricts <scp>IRF3</scp> and <scp>NF‐κB</scp> signaling of <scp>IFNB1</scp> antiviral response","year":2017,"lang":"en","type":"article","venue":"Traffic","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Canadian Liver Foundation; Novartis","keywords":"IRF3; Nuclear transport; NS3; Biology; Cell biology; Nuclear export signal; Signal transducing adaptor protein; Innate immune system; Karyopherin; Importin; TLR3; Nuclear protein; Gene silencing; Transcription factor; Signal transduction; Cell nucleus; Virus; Virology; Hepatitis C virus; Immune system; Toll-like receptor; Cytoplasm; Biochemistry; Gene; Immunology","score_opus":0.012273385047086777,"score_gpt":0.24355164353472983,"score_spread":0.23127825848764305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2610461060","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99478936,0.00081317435,0.0031223125,0.00006832751,0.00001431567,0.00001746991,0.00026534795,0.00007667037,0.00083296804],"genre_scores_gemma":[0.99445796,0.00047718862,0.0025490415,0.00004314538,0.0000035666023,0.000019344043,0.00048205853,0.00003663126,0.0019311188],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991584,0.00000924952,0.000007656911,0.000021061518,0.000025508902,0.000020675516],"domain_scores_gemma":[0.9999304,0.000008855895,0.000025512241,0.000009971861,0.000009503327,0.00001568939],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000886835,0.00032737356,0.00018361992,0.00011568503,0.00019685438,0.00029828673,0.000121862766,0.00021903234,0.0009090872],"category_scores_gemma":[0.000062403036,0.00012878515,0.00029496217,0.00009376924,0.0002474975,0.00017635929,0.00016842826,0.00043739946,0.0003863557],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036732916,0.0000043192294,0.00006479076,0.000012117148,0.0000021203225,0.0000149612115,0.000004297334,0.000020736215,0.9996269,0.000020219943,0.000008393615,0.00018442495],"study_design_scores_gemma":[0.000003517335,0.00004558536,0.0015826469,0.0000018327307,0.000004894017,0.00011690179,0.000010463605,0.00045946284,0.99701,0.000018948604,0.0007436845,0.000002015481],"about_ca_topic_score_codex":0.00086267147,"about_ca_topic_score_gemma":0.0012251934,"teacher_disagreement_score":0.0009090872,"about_ca_system_score_codex":0.0003565054,"about_ca_system_score_gemma":0.00020158014,"threshold_uncertainty_score":0.0030412078},"labels":[],"label_agreement":null},{"id":"W2612952098","doi":"10.3390/v9050107","title":"A Conserved Residue, Tyrosine (Y) 84, in H5N1 Influenza A Virus NS1 Regulates IFN Signaling Responses to Enhance Viral Infection","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Toronto General Hospital; University of Toronto; Canada Research Chairs; University Health Network","funders":"","keywords":"Biology; Interferon; Virology; Influenza A virus; Virulence; Tyrosine; Virus; Downregulation and upregulation; Tyrosine phosphorylation; Titer; Influenza A virus subtype H5N1; Phosphorylation; Recombinant DNA; Gene; Cell biology; Genetics; Biochemistry","score_opus":0.037266186108786334,"score_gpt":0.34063537941579447,"score_spread":0.3033691933070081,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2612952098","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99863845,0.0004449044,0.00039169384,0.000026145613,0.000008947395,0.000005882592,0.00009817672,0.000010652221,0.00037516872],"genre_scores_gemma":[0.9981749,0.0003478857,0.0003917841,0.000016444057,0.0000029683104,0.000005416286,0.00016802315,0.000003830648,0.0008886739],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99996686,0.000005007024,0.0000026823068,0.000007547262,0.0000069029747,0.000010891767],"domain_scores_gemma":[0.99997115,0.000002656996,0.000010953637,0.0000026792297,0.000003365732,0.000009206081],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000053998625,0.00017005084,0.00010741428,0.000059635237,0.000120621226,0.00012832497,0.00010086681,0.00010691407,0.00056371],"category_scores_gemma":[0.00003541284,0.000049681694,0.00011713919,0.000049261624,0.00012482953,0.00009557856,0.00010297606,0.00021728218,0.00024161972],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012835406,0.000012421741,0.00059806113,0.0000176091,0.0000023623868,0.0000530817,0.0000082781435,0.000063956315,0.99838126,0.000029641356,0.00002128918,0.0006837241],"study_design_scores_gemma":[0.00002620349,0.00034648247,0.036285926,0.000008911539,0.00001717559,0.00036366712,0.000073696545,0.0013166509,0.9590052,0.00005858256,0.0024914416,0.0000061175024],"about_ca_topic_score_codex":0.0011910241,"about_ca_topic_score_gemma":0.0013630547,"teacher_disagreement_score":0.0011910241,"about_ca_system_score_codex":0.00029195903,"about_ca_system_score_gemma":0.00015393668,"threshold_uncertainty_score":0.0023681521},"labels":[],"label_agreement":null},{"id":"W2621003511","doi":"10.1016/j.it.2017.05.005","title":"Type I Interferon in Chronic Virus Infection and Cancer","year":2017,"lang":"en","type":"review","venue":"Trends in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":511,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Princess Margaret Cancer Centre; University Health Network","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Cancer Institute; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Immunology; Interferon; Cancer; Virus; Medicine; Interferon type I; Virology; Internal medicine","score_opus":0.09809902566169973,"score_gpt":0.4116546266615262,"score_spread":0.3135556009998265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2621003511","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007395205,0.996642,0.000112865295,0.00072990416,0.0013976109,0.0000039531374,0.000012713462,0.0000069293756,0.0010200985],"genre_scores_gemma":[0.0006268843,0.9955859,0.00014633506,0.0005768922,0.0016951553,0.000007696162,0.000027453307,0.0000016388983,0.0013318966],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998336,0.000027245074,0.000024169216,0.000024933717,0.000067224544,0.000022738854],"domain_scores_gemma":[0.9996574,0.00012144503,0.000062278355,0.000010507931,0.000084210405,0.00006404533],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007000897,0.0009395513,0.0011505187,0.0011551506,0.0002404156,0.0011586087,0.0006731251,0.0013594384,0.0040104],"category_scores_gemma":[0.0008707353,0.00023450691,0.00027249576,0.0012533492,0.00059293566,0.0016191492,0.0010246466,0.0023909996,0.0020283628],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008765473,0.000034132998,0.00016200452,0.006223528,0.00003725997,0.0001295228,0.000035378274,0.0001595866,0.00093241484,0.0025933397,0.07265352,0.9169517],"study_design_scores_gemma":[0.000019980345,0.000045350993,0.0004606585,0.0023300431,0.00005992489,0.0005527612,0.00004569104,0.00006555383,0.00018548337,0.002014388,0.9942101,0.000009998688],"about_ca_topic_score_codex":0.000640967,"about_ca_topic_score_gemma":0.0014790263,"teacher_disagreement_score":0.0040104,"about_ca_system_score_codex":0.0006793442,"about_ca_system_score_gemma":0.0015328032,"threshold_uncertainty_score":0.013416171},"labels":[],"label_agreement":null},{"id":"W2624275086","doi":"10.1038/ncomms15618","title":"DNA exonuclease Trex1 regulates radiotherapy-induced tumour immunogenicity","year":2017,"lang":"en","type":"article","venue":"Nature Communications","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1726,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Center for Advancing Translational Sciences; National Center for Research Resources; National Cancer Institute; National Institutes of Health; York University; Chemotherapy Foundation; Breast Cancer Research Foundation; Weill Cornell Medical College; U.S. Department of Defense","keywords":"Abscopal effect; Context (archaeology); Immunogenicity; Cancer research; CD8; Effector; DNA damage; Immunotherapy; Cancer immunotherapy; Immune system; Biology; Cell biology; DNA; Immunology; Biochemistry","score_opus":0.026339258848409288,"score_gpt":0.3114498854488363,"score_spread":0.285110626600427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2624275086","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99470973,0.0025585669,0.0013616711,0.00008560265,0.000016033555,0.000014960603,0.00019726624,0.000046582918,0.001009522],"genre_scores_gemma":[0.9977202,0.00043791338,0.00039560028,0.000023617495,0.0000048453967,0.000007517949,0.0001652396,0.000009250579,0.0012358949],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991035,0.000016763519,0.000005654637,0.000023049948,0.000017065806,0.000027163182],"domain_scores_gemma":[0.99986374,0.000024722103,0.00005894983,0.000009095369,0.000018976472,0.000024489533],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013088157,0.00016743485,0.0001992992,0.00010740649,0.00012213556,0.00030720985,0.00009323879,0.00020680683,0.0019713186],"category_scores_gemma":[0.00013496407,0.000090487934,0.00016375222,0.00006516847,0.00014182592,0.00015122177,0.00014443659,0.00043373895,0.00047426127],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000161012,0.000014185571,0.0007182299,0.000019970457,0.0000023577434,0.000035183533,0.000011338503,0.000060274506,0.9979861,0.000040992116,0.00003191632,0.00091838563],"study_design_scores_gemma":[0.0000144315945,0.00032975513,0.028936759,0.000010353964,0.000010042166,0.00033526315,0.00003979044,0.0008497935,0.96783376,0.00007224639,0.0015630719,0.000004751851],"about_ca_topic_score_codex":0.0001753034,"about_ca_topic_score_gemma":0.00020986408,"teacher_disagreement_score":0.0019713186,"about_ca_system_score_codex":0.00024352361,"about_ca_system_score_gemma":0.00010823507,"threshold_uncertainty_score":0.006594658},"labels":[],"label_agreement":null},{"id":"W2635877638","doi":"10.1101/152850","title":"A conserved homo-dimerization interface in human IFIT1 provides insights into IFIT interactome assembly","year":2017,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; McGill University","funders":"","keywords":"Interactome; Tetratricopeptide; Antiparallel (mathematics); Dimer; RNA; Biology; Chemistry; Computational biology; Biophysics; Cell biology; Biochemistry; Gene","score_opus":0.01826378939701153,"score_gpt":0.26239940690282565,"score_spread":0.2441356175058141,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2635877638","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932668,0.0011431813,0.004001628,0.00013853096,0.000032687865,0.000008866982,0.00016488544,0.000078954385,0.0011645729],"genre_scores_gemma":[0.9963425,0.00015239624,0.002399468,0.000065251304,0.000008054444,0.0000055373757,0.0002821273,0.000010927948,0.0007337356],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999943,0.000008734295,0.0000031963582,0.000018611763,0.000014772665,0.000011689395],"domain_scores_gemma":[0.9999361,0.000014969665,0.000012887809,0.0000064510646,0.000008369247,0.000021258173],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008876862,0.00021040946,0.00016984956,0.00013498569,0.00023871234,0.00019402898,0.0001819862,0.00040809467,0.001568244],"category_scores_gemma":[0.00011485,0.0000976326,0.00029884066,0.0000937055,0.00014752416,0.00024126362,0.00012627008,0.0004668029,0.00048614072],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015155111,0.00003713973,0.0006056468,0.000031592997,0.000006022285,0.00022288026,0.00003257129,0.00022126583,0.99698013,0.00027465614,0.00011643788,0.0013199766],"study_design_scores_gemma":[0.000038438095,0.00016759825,0.03254722,0.000024168821,0.000027152004,0.0015821502,0.00013300564,0.016244605,0.943711,0.0008043181,0.004699936,0.00002045337],"about_ca_topic_score_codex":0.0003967981,"about_ca_topic_score_gemma":0.00046397574,"teacher_disagreement_score":0.001568244,"about_ca_system_score_codex":0.00028998332,"about_ca_system_score_gemma":0.00011672651,"threshold_uncertainty_score":0.005246341},"labels":[],"label_agreement":null},{"id":"W2735185325","doi":"10.1016/j.fsi.2017.07.025","title":"CHSE-214: A model for studying extracellular dsRNA sensing in vitro","year":2017,"lang":"en","type":"article","venue":"Fish & Shellfish Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo; Wilfrid Laurier University","funders":"Service Delivery and Organisation Programme; Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; RNA silencing; Extracellular; MDA5; Cell biology; Receptor; Innate immune system; Interferon; RNA; Intracellular; Molecular biology; Virology; RNA interference; Gene; Biochemistry","score_opus":0.037560694648396745,"score_gpt":0.27512781864635577,"score_spread":0.23756712399795904,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2735185325","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9614101,0.0029944289,0.026055796,0.0004025651,0.00022987268,0.00017693813,0.0013488429,0.00011968476,0.0072617587],"genre_scores_gemma":[0.9523145,0.0019942785,0.032217223,0.0001503683,0.00003998455,0.00022254128,0.0034182516,0.000078762525,0.009563958],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997495,0.00008734617,0.000026726255,0.000037010064,0.000057282137,0.000042131836],"domain_scores_gemma":[0.9997253,0.00014719201,0.00003309132,0.00005465262,0.000019491823,0.000020222975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004649544,0.00056674826,0.00031793315,0.00028374264,0.00034237292,0.00041776616,0.00040687242,0.00043245315,0.0012636008],"category_scores_gemma":[0.0002633681,0.00019388528,0.00041830688,0.0002648308,0.0003372234,0.00038640696,0.00038013307,0.0012240537,0.00079694326],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005453518,0.000027369,0.000093871095,0.00002797321,0.0000023422597,0.000034983288,0.000010300813,0.00010368163,0.99894696,0.00018301654,0.000029815974,0.00048514034],"study_design_scores_gemma":[0.000007649052,0.00012057952,0.00036260288,0.0000043934865,0.000005317164,0.0000921801,0.00001349634,0.00070089014,0.996834,0.00007705594,0.0017791563,0.000002720371],"about_ca_topic_score_codex":0.0007563946,"about_ca_topic_score_gemma":0.0012517578,"teacher_disagreement_score":0.0012636008,"about_ca_system_score_codex":0.00051037926,"about_ca_system_score_gemma":0.00023947856,"threshold_uncertainty_score":0.004227102},"labels":[],"label_agreement":null},{"id":"W2735796242","doi":"10.1073/pnas.1704259114","title":"Severe viral respiratory infections in children with <i>IFIH1</i> loss-of-function mutations","year":2017,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":160,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Immune system; Respiratory system; Pathogen; Immunology; Biology; Mutation; Primary immunodeficiency; Loss function; Gene; Medicine; Phenotype; Genetics","score_opus":0.026193300178259517,"score_gpt":0.29368700875257947,"score_spread":0.26749370857432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2735796242","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978522,0.00038039437,0.00016732723,0.00016972609,0.000022781247,0.0000092665405,0.00021540574,0.000016580916,0.0011662157],"genre_scores_gemma":[0.99957293,0.00010149012,0.00010313547,0.000037651433,0.000015950469,0.000003227568,0.000089094894,0.0000033541878,0.000073170624],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997009,0.0000705542,0.000023998766,0.00007379406,0.000044069235,0.00008674102],"domain_scores_gemma":[0.99935037,0.000121630124,0.00029553345,0.000026836291,0.000032283373,0.00017334936],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027289486,0.00036148666,0.00025566886,0.00043068355,0.00033033284,0.00036721723,0.00014998807,0.0004606107,0.002009709],"category_scores_gemma":[0.0017067094,0.00013676051,0.00022176479,0.00025369786,0.00046312177,0.000338113,0.00036267994,0.0006915452,0.00019926918],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002066468,0.000021969563,0.98756814,0.000024826732,0.0000212215,0.0020805812,0.00009738347,0.000090252084,0.003994335,0.00010247011,0.0007826586,0.0050095813],"study_design_scores_gemma":[0.000012582546,0.00016876124,0.97697985,0.000026473625,0.000028347824,0.020076953,0.0003924905,0.00025136382,0.001149497,0.00019634458,0.0007076505,0.000009672256],"about_ca_topic_score_codex":0.001699528,"about_ca_topic_score_gemma":0.0019107261,"teacher_disagreement_score":0.002009709,"about_ca_system_score_codex":0.00026980668,"about_ca_system_score_gemma":0.00024090389,"threshold_uncertainty_score":0.0067231655},"labels":[],"label_agreement":null},{"id":"W2741264910","doi":"10.1158/1538-7445.am2017-4997","title":"Abstract 4997: Specialized microRNP and translation mechanisms in quiescent cancer cells","year":2017,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"EIF4G; Translation (biology); Eukaryotic translation; Biology; EIF4E; Internal ribosome entry site; microRNA; Protein biosynthesis; Eukaryotic translation initiation factor 4 gamma; Downregulation and upregulation; Messenger RNA; Translational regulation; Cell biology; Molecular biology; Gene; Genetics","score_opus":0.1103781148992685,"score_gpt":0.415954662981745,"score_spread":0.3055765480824765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2741264910","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98917854,0.0036382482,0.0031903414,0.00010511197,0.000030171139,0.00001936454,0.0008209834,0.00011967997,0.0028975334],"genre_scores_gemma":[0.9920804,0.0007436608,0.001643448,0.00008752021,0.000021636839,0.00003868877,0.0019008389,0.000028444343,0.0034554065],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990606,0.000008857115,0.000008033576,0.000034062254,0.000025918607,0.000017123837],"domain_scores_gemma":[0.9999218,0.000013744354,0.000018725987,0.000010948887,0.0000087993385,0.000026012573],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000080655846,0.00018568587,0.00022042534,0.00025521903,0.00022505492,0.00039574,0.0002241762,0.00025392702,0.0017119211],"category_scores_gemma":[0.00009246617,0.00010298303,0.00020903371,0.00023284994,0.00019049413,0.00024609154,0.00019074403,0.00023972367,0.0006493918],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016223577,0.0000135992195,0.00093791005,0.00004597916,0.000005302745,0.00015974292,0.000033991615,0.00006524943,0.99525404,0.00043576787,0.00009871321,0.0027874864],"study_design_scores_gemma":[0.00004551849,0.0004979826,0.06596563,0.000019263009,0.00002389922,0.0011742564,0.00014432661,0.0022530474,0.91769695,0.0006485188,0.011514224,0.000016424488],"about_ca_topic_score_codex":0.00056049705,"about_ca_topic_score_gemma":0.00048577593,"teacher_disagreement_score":0.0017119211,"about_ca_system_score_codex":0.0004190259,"about_ca_system_score_gemma":0.00019294972,"threshold_uncertainty_score":0.005726993},"labels":[],"label_agreement":null},{"id":"W2741490837","doi":"10.1158/1538-7445.am2017-533","title":"Abstract 533: XIAP BIR domain suppresses miR-200a expression and subsequently promotes EGFR protein translation and anchorage-independent growth of bladder cancer cell","year":2017,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"","keywords":"XIAP; Cancer research; Inhibitor of apoptosis; Cancer; Phosphorylation; MAPK/ERK pathway; Cancer cell; Transcription factor; Cell growth; Apoptosis; Cell biology; Chemistry; Biology; Programmed cell death; Caspase; Biochemistry; Gene; Genetics","score_opus":0.06236645200690547,"score_gpt":0.3604688548758536,"score_spread":0.2981024028689481,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2741490837","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9858645,0.0030312003,0.0033275953,0.00033525092,0.00017397414,0.000036650985,0.00085290207,0.00036644083,0.0060115093],"genre_scores_gemma":[0.99285406,0.0006071446,0.00087096856,0.00009109288,0.000013622187,0.000039286464,0.00067915505,0.000015955578,0.0048287683],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99988794,0.000011343289,0.000011962245,0.000016420314,0.00003981753,0.000032557153],"domain_scores_gemma":[0.9999635,0.000005323343,0.000007971972,0.0000054546986,0.000005561546,0.000012074871],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000099589284,0.0002585331,0.00029238855,0.00017743949,0.00021237909,0.0002040628,0.00015774656,0.00020250425,0.0030267183],"category_scores_gemma":[0.00007570336,0.000112733294,0.00023268706,0.00015180951,0.00018705077,0.000120131095,0.00014558397,0.00052173,0.00066825224],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001437983,0.00003912828,0.00011574711,0.000065913366,0.000004529583,0.00007464278,0.000011943208,0.000047327165,0.9976714,0.00014021706,0.00023637759,0.001449036],"study_design_scores_gemma":[0.000025720672,0.00021673451,0.0026686424,0.000005153218,0.000015915835,0.00030337836,0.00002212778,0.00093839515,0.9918725,0.000040967832,0.0038859658,0.0000042966917],"about_ca_topic_score_codex":0.0007541587,"about_ca_topic_score_gemma":0.00071877707,"teacher_disagreement_score":0.0030267183,"about_ca_system_score_codex":0.00025061745,"about_ca_system_score_gemma":0.00028892964,"threshold_uncertainty_score":0.010125399},"labels":[],"label_agreement":null},{"id":"W2741620700","doi":"10.1371/journal.pone.0181551","title":"Solution NMR structure of the TRIM21 B-box2 and identification of residues involved in its interaction with the RING domain","year":2017,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto","funders":"National Supercomputer Centre, Linköpings Universitet; Göteborgs Universitet; Vetenskapsrådet; University of Toronto; Cancerfonden; National Science Council; Swedish Foundation for International Cooperation in Research and Higher Education; Swedish Cancer Foundation","keywords":"Ubiquitin ligase; Chemistry; Nuclear magnetic resonance spectroscopy; Protein Data Bank (RCSB PDB); Trim; Ring (chemistry); Protein structure; Docking (animal); Coiled coil; Crystallography; Stereochemistry; Ubiquitin; Biochemistry; Computer science","score_opus":0.029911033635153683,"score_gpt":0.24548079719613905,"score_spread":0.21556976356098537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2741620700","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9834917,0.0029853536,0.007827921,0.00080903166,0.000067263594,0.00003230308,0.0012684105,0.00012668376,0.0033913588],"genre_scores_gemma":[0.97087145,0.001974225,0.017093357,0.00028151288,0.00006740316,0.000035398993,0.0070078247,0.00004019242,0.0026286799],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99994683,0.00000906023,0.0000025482323,0.000012699203,0.000020515057,0.0000084364265],"domain_scores_gemma":[0.9999031,0.000014354938,0.000020661591,0.000007705057,0.000023723063,0.00003055138],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014793605,0.00025978562,0.00021026086,0.0001759129,0.00042950804,0.00021310445,0.000474382,0.0006372993,0.0017958225],"category_scores_gemma":[0.0002438775,0.00016334816,0.00019299185,0.0002522442,0.00020198591,0.00028521538,0.00021587078,0.00082418555,0.00039318297],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036693527,0.000071022754,0.00082945765,0.00018111267,0.000031221374,0.0002683046,0.00013720397,0.002130128,0.99039817,0.00060853356,0.0008949228,0.0040831524],"study_design_scores_gemma":[0.00026535155,0.0009478714,0.04095185,0.00010295819,0.00022971974,0.002335411,0.00067467464,0.07040565,0.8462225,0.0023166148,0.035401218,0.00014624048],"about_ca_topic_score_codex":0.0012742061,"about_ca_topic_score_gemma":0.0015701851,"teacher_disagreement_score":0.0017958225,"about_ca_system_score_codex":0.00035483344,"about_ca_system_score_gemma":0.0003345014,"threshold_uncertainty_score":0.0060076714},"labels":[],"label_agreement":null},{"id":"W2745719851","doi":"10.1016/j.celrep.2017.07.052","title":"An Integrated Systems Biology Approach Identifies TRIM25 as a Key Determinant of Breast Cancer Metastasis","year":2017,"lang":"en","type":"article","venue":"Cell Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":128,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; National Cancer Institute; National Institutes of Health; Memorial Sloan-Kettering Cancer Center; National Institute of Diabetes and Digestive and Kidney Diseases; U.S. Department of Defense; Starr Cancer Consortium","keywords":"Metastasis; Interactome; Biology; Regulator; Breast cancer; Transcriptional regulation; Transcription factor; Cancer; Regulation of gene expression; Computational biology; Metastatic breast cancer; Cancer research; Bioinformatics; Gene; Genetics","score_opus":0.019384258539247898,"score_gpt":0.29239522888898073,"score_spread":0.2730109703497328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2745719851","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7980958,0.005158105,0.18259461,0.0011610956,0.00025623033,0.00015800215,0.0005699918,0.00088097487,0.011125134],"genre_scores_gemma":[0.9721416,0.0013427334,0.024820255,0.0001232973,0.000021624981,0.00007516197,0.00020742121,0.000018168306,0.0012495747],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998841,0.000025348962,0.0000048292814,0.000039813924,0.000029171913,0.000016659473],"domain_scores_gemma":[0.9999356,0.000020840473,0.0000150576425,0.0000117343425,0.0000060226052,0.00001063658],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037653002,0.00034114183,0.00042042692,0.00023683006,0.00026544585,0.0006410515,0.00042248634,0.00027703686,0.0015328352],"category_scores_gemma":[0.0002335156,0.00018620693,0.0003936722,0.00013595309,0.0004947393,0.0004243331,0.00043888297,0.00067471084,0.00020088039],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021234929,0.00010404009,0.0011198818,0.00021086843,0.000068764064,0.000113300586,0.000038184084,0.008001762,0.966,0.0122454,0.00039318428,0.011492272],"study_design_scores_gemma":[0.00009806353,0.00076960726,0.0043602553,0.000035563102,0.00018896312,0.00031240232,0.00007875615,0.18488044,0.78673446,0.012321939,0.010173378,0.000046060715],"about_ca_topic_score_codex":0.00061893073,"about_ca_topic_score_gemma":0.0011040553,"teacher_disagreement_score":0.0015328352,"about_ca_system_score_codex":0.0009295842,"about_ca_system_score_gemma":0.0004864436,"threshold_uncertainty_score":0.006744623},"labels":[],"label_agreement":null},{"id":"W2747568591","doi":"10.1016/j.it.2017.07.013","title":"cGAS–STING and Cancer: Dichotomous Roles in Tumor Immunity and Development","year":2017,"lang":"en","type":"review","venue":"Trends in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":221,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; BC Cancer Agency","funders":"Canadian Institutes of Health Research","keywords":"Immunology; Immunity; Sting; Cancer; Biology; Medicine; Immune system; Genetics","score_opus":0.08466536605033567,"score_gpt":0.3737954595038683,"score_spread":0.2891300934535326,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2747568591","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00029161075,0.99582064,0.00026939897,0.0010924167,0.00095053215,0.0000045911343,0.000026571437,0.000017145227,0.0015269851],"genre_scores_gemma":[0.0017824295,0.9943515,0.0002868355,0.0007539271,0.0010807667,0.000008640503,0.00005411342,0.0000026457556,0.0016791141],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998853,0.000014163411,0.00001289148,0.000019929714,0.000050239465,0.00001757448],"domain_scores_gemma":[0.9998267,0.000054842327,0.00003137973,0.0000059343693,0.000040288687,0.000040938285],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046096958,0.00072669354,0.00072912034,0.0006856462,0.00015599886,0.0009410725,0.0006121099,0.0011440368,0.0030657388],"category_scores_gemma":[0.0004826682,0.00016700417,0.00021200176,0.00082623755,0.0005709621,0.0012515497,0.0007783392,0.0022058631,0.0015011173],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011875938,0.000033650314,0.00019722767,0.0036343297,0.00003598767,0.00013978855,0.000033561122,0.000240743,0.002864463,0.004828741,0.044844057,0.9430287],"study_design_scores_gemma":[0.000020629119,0.000045034856,0.0005251077,0.00088763126,0.000043398864,0.00056132453,0.00004483734,0.000090225796,0.00047753757,0.002493923,0.99479806,0.000012228167],"about_ca_topic_score_codex":0.00038063657,"about_ca_topic_score_gemma":0.00097375014,"teacher_disagreement_score":0.0030657388,"about_ca_system_score_codex":0.00049411244,"about_ca_system_score_gemma":0.0010884865,"threshold_uncertainty_score":0.010255933},"labels":[],"label_agreement":null},{"id":"W2751387349","doi":"10.1016/j.jid.2017.08.019","title":"Imbalance of Mitochondrial Respiratory Chain Complexes in the Epidermis Induces Severe Skin Inflammation","year":2017,"lang":"en","type":"article","venue":"Journal of Investigative Dermatology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SKiN Health","funders":"Center for Molecular Medicine Cologne, University of Cologne; Deutsche Forschungsgemeinschaft","keywords":"Epidermis (zoology); Inflammation; Mitochondrial respiratory chain; Respiratory system; Mitochondrion; Cell biology; Chemistry; Medicine; Immunology; Biology; Anatomy","score_opus":0.03705717092859164,"score_gpt":0.2934402532314081,"score_spread":0.2563830823028165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2751387349","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99594915,0.0019491154,0.0010063924,0.00015860249,0.00007162176,0.000015988842,0.00006884022,0.00004475628,0.0007356522],"genre_scores_gemma":[0.9986652,0.00039196757,0.00021731539,0.000041822233,0.0000160793,0.0000062788326,0.000046449586,0.000005159928,0.0006096752],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997416,0.00007530742,0.000025242925,0.00004176877,0.000052983927,0.00006299273],"domain_scores_gemma":[0.99982506,0.000021396798,0.00005231675,0.000029596482,0.000014302836,0.00005729958],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023259546,0.00037407456,0.0003000128,0.0002990208,0.00018776735,0.0003713235,0.00010101197,0.0004823483,0.001621458],"category_scores_gemma":[0.00017616752,0.00016946359,0.00026712986,0.00014084937,0.00027159005,0.00032495963,0.00025942846,0.0010971831,0.00029195094],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007017681,0.00012124135,0.0008181607,0.00003897436,0.00001261096,0.00028260308,0.00001228826,0.00003312402,0.99606776,0.00007783704,0.00007014442,0.0017634954],"study_design_scores_gemma":[0.00014006608,0.0023250834,0.0455816,0.000030325204,0.0000976125,0.003986078,0.00027980685,0.0011930974,0.94364744,0.00060929265,0.0020954853,0.000013971941],"about_ca_topic_score_codex":0.00006534059,"about_ca_topic_score_gemma":0.00012148048,"teacher_disagreement_score":0.001621458,"about_ca_system_score_codex":0.00021807192,"about_ca_system_score_gemma":0.00013327811,"threshold_uncertainty_score":0.0054243207},"labels":[],"label_agreement":null},{"id":"W2754636267","doi":"10.3389/fgene.2017.00118","title":"RIG-I-Like Receptor Signaling in Singleton-Merten Syndrome","year":2017,"lang":"en","type":"review","venue":"Frontiers in Genetics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"MDA5; Innate immune system; RIG-I; Pattern recognition receptor; Biology; Immune system; Proinflammatory cytokine; Immunology; Interferon; Receptor; Genetics; Gene; Inflammation; RNA","score_opus":0.05812553558889865,"score_gpt":0.31933196543464576,"score_spread":0.2612064298457471,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2754636267","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00018334824,0.9978174,0.00014151794,0.0002888709,0.00037180353,0.0000034843583,0.000017204231,0.000008377718,0.0011680137],"genre_scores_gemma":[0.0011308622,0.9970907,0.00016404757,0.0002876007,0.00032813096,0.000005044883,0.000051245803,0.0000023167952,0.00094013696],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999899,0.000013872288,0.000019969006,0.000018663928,0.000036142654,0.000012238048],"domain_scores_gemma":[0.999874,0.000044576613,0.000021772674,0.0000039043216,0.0000349577,0.000020763331],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032741536,0.00059682544,0.00082666,0.0015296217,0.00020794792,0.000553368,0.0005602158,0.00084001326,0.0022463247],"category_scores_gemma":[0.0003910213,0.00017222899,0.0002702675,0.001142263,0.00031020833,0.00084184017,0.0005537613,0.0012743687,0.0017908982],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009423652,0.000041623873,0.00028775248,0.010338839,0.00006257315,0.0007848425,0.00006356011,0.00027394708,0.0031360511,0.004263248,0.040964015,0.9396893],"study_design_scores_gemma":[0.000014134625,0.00005198512,0.00080708135,0.0016800547,0.000055328055,0.0045038676,0.000045262343,0.000055160253,0.00058188464,0.0014013626,0.9907906,0.000013316397],"about_ca_topic_score_codex":0.00042488644,"about_ca_topic_score_gemma":0.0008016931,"teacher_disagreement_score":0.0022463247,"about_ca_system_score_codex":0.00049983844,"about_ca_system_score_gemma":0.00075070804,"threshold_uncertainty_score":0.007514715},"labels":[],"label_agreement":null},{"id":"W2763852601","doi":"10.1093/ijnp/pyx083","title":"Interferon-Alpha Reduces Human Hippocampal Neurogenesis and Increases Apoptosis via Activation of Distinct STAT1-Dependent Mechanisms","year":2017,"lang":"en","type":"article","venue":"The International Journal of Neuropsychopharmacology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":113,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Alzheimer’s Society; H. Lundbeck A/S; University of Southampton; University of Sussex; University College London; King's College London; Department of Health and Social Care; Alzheimer Society; National Institute for Health and Care Research; Alzheimer's Society; South London and Maudsley NHS Foundation Trust; GlaxoSmithKline","keywords":"Neurogenesis; Hippocampal formation; Apoptosis; Neuroscience; Alpha (finance); Cell biology; Biology; Psychology; Genetics; Developmental psychology","score_opus":0.021826832877492257,"score_gpt":0.31756358800970813,"score_spread":0.29573675513221587,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2763852601","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.989981,0.006372059,0.0010818526,0.00012983425,0.00006375675,0.0000504855,0.00048347606,0.000047483307,0.0017900765],"genre_scores_gemma":[0.9932051,0.0031290364,0.0011708991,0.00010410674,0.000025086132,0.00007886761,0.0008680767,0.000007191185,0.001411721],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998969,0.000020194106,0.000015737387,0.000013949628,0.000030239436,0.000022960696],"domain_scores_gemma":[0.99994075,0.0000107188725,0.000022067403,0.000007345394,0.000008529204,0.000010565361],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015735177,0.00037393247,0.00023157202,0.00023887148,0.000086501794,0.00015348467,0.00010391335,0.00019343566,0.0013822733],"category_scores_gemma":[0.00007989448,0.00007623009,0.0003822635,0.00013706797,0.00015308622,0.00009031518,0.00010289842,0.00041717137,0.00027930143],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00096691475,0.00017576387,0.00087841373,0.00012023617,0.000026609994,0.00007063798,0.000017457118,0.00009032013,0.9917032,0.000051243358,0.0001144815,0.0057847407],"study_design_scores_gemma":[0.00015825966,0.002302369,0.020421071,0.00003347174,0.00006585438,0.00043383744,0.00003449054,0.0006456353,0.9728863,0.00006743608,0.0029454152,0.000005818258],"about_ca_topic_score_codex":0.00017010728,"about_ca_topic_score_gemma":0.00035342158,"teacher_disagreement_score":0.0013822733,"about_ca_system_score_codex":0.00018803285,"about_ca_system_score_gemma":0.00015038461,"threshold_uncertainty_score":0.0046241283},"labels":[],"label_agreement":null},{"id":"W2766278911","doi":"10.1038/s41598-017-12777-7","title":"Phosphorylable tyrosine residue 162 in the double-stranded RNA-dependent kinase PKR modulates its interaction with SUMO","year":2017,"lang":"en","type":"article","venue":"Scientific Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs","funders":"Instituto de Salud Carlos III; Ministerio de Economía y Competitividad; Consejo Nacional de Ciencia y Tecnología","keywords":"Protein kinase R; Phosphorylation; EIF-2 kinase; Cell biology; Biology; Tyrosine; SUMO protein; Protein kinase A; RNA; Pact; RNA silencing; Chemistry; Biochemistry; RNA interference; Mitogen-activated protein kinase kinase; Cyclin-dependent kinase 2; Ubiquitin","score_opus":0.024807263640738802,"score_gpt":0.27409089026909417,"score_spread":0.24928362662835538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766278911","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977182,0.00062883866,0.0008463668,0.000048897207,0.000014958828,0.0000053061444,0.000037850186,0.000010093097,0.00068952364],"genre_scores_gemma":[0.9979215,0.0003826383,0.00048763657,0.000018547655,0.0000066767166,0.0000052483624,0.00007026377,0.000005029071,0.0011024388],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999393,0.00001387352,0.0000043476944,0.000015274865,0.000011604403,0.000015684967],"domain_scores_gemma":[0.9999517,0.000006082456,0.00002133945,0.000004881857,0.0000036316922,0.000012382971],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013213707,0.00024590932,0.0001701733,0.00006396191,0.00010887646,0.00018729742,0.00010801391,0.00017007986,0.0015603334],"category_scores_gemma":[0.00011382493,0.00008274061,0.0001555107,0.000066177105,0.00018662054,0.00021722482,0.0001782307,0.00029404208,0.000496592],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017186183,0.00001596757,0.00040142005,0.000021699767,0.0000041929657,0.000074285315,0.000008704048,0.00006231342,0.9983846,0.00007934818,0.00001596778,0.0007597039],"study_design_scores_gemma":[0.000030711522,0.00026668527,0.007492896,0.000004521081,0.00001032,0.00039561433,0.000030874187,0.000954525,0.9898301,0.00009221048,0.00088663405,0.0000050485287],"about_ca_topic_score_codex":0.00009045877,"about_ca_topic_score_gemma":0.00013051095,"teacher_disagreement_score":0.0015603334,"about_ca_system_score_codex":0.00015842836,"about_ca_system_score_gemma":0.00010335116,"threshold_uncertainty_score":0.005219817},"labels":[],"label_agreement":null},{"id":"W2766725373","doi":"10.1016/j.vaccine.2017.10.072","title":"Superior immunogenicity of HCV envelope glycoproteins when adjuvanted with cyclic-di-AMP, a STING activator or archaeosomes","year":2017,"lang":"en","type":"article","venue":"Vaccine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; University of Alberta","funders":"Alberta Innovates; University of Alberta","keywords":"Immunogenicity; Adjuvant; Neutralizing antibody; Immune system; Immunization; Antibody; Immunology; Virology; Medicine; Biology","score_opus":0.023899067919435694,"score_gpt":0.27058699700776634,"score_spread":0.24668792908833065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766725373","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99861336,0.000304402,0.00040155073,0.000029482431,0.00002368343,0.000009033862,0.00004874739,0.000010201718,0.00055955723],"genre_scores_gemma":[0.99886864,0.00014166717,0.00029390396,0.000015459073,0.000006679122,0.0000046280725,0.00008091876,0.0000037117452,0.00058433955],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988735,0.000031510135,0.00000737968,0.000012064168,0.000021590715,0.000040144234],"domain_scores_gemma":[0.99989784,0.00002626411,0.000020426476,0.000015126172,0.00001360785,0.000026746158],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019604352,0.0002662704,0.00014371974,0.00014725825,0.000092391616,0.00023915112,0.00010168645,0.00024783754,0.0008111046],"category_scores_gemma":[0.00027669556,0.00008343205,0.00013683278,0.000081170336,0.00018581924,0.0002079172,0.00015457533,0.00039906433,0.00017735119],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009800177,0.0000721066,0.00024421886,0.00003341498,0.0000045996526,0.00002996417,0.000016125503,0.00018838272,0.9962877,0.00011049457,0.000031493353,0.0020014222],"study_design_scores_gemma":[0.000074176874,0.0023975621,0.0024719075,0.0000112567695,0.000025626925,0.0001329224,0.000024660854,0.001040818,0.9925795,0.00008767447,0.0011486115,0.000005135552],"about_ca_topic_score_codex":0.00036492775,"about_ca_topic_score_gemma":0.00042968272,"teacher_disagreement_score":0.0008111046,"about_ca_system_score_codex":0.0001771744,"about_ca_system_score_gemma":0.00023974468,"threshold_uncertainty_score":0.0027133822},"labels":[],"label_agreement":null},{"id":"W2768643229","doi":"","title":"Construction and characterization of mutant IF1 protein that lacks its N-terminal region","year":2017,"lang":"en","type":"article","venue":"The Japanese Biochemical Society/The Molecular Biology Society of Japan","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nutrasource","funders":"","keywords":"Terminal (telecommunication); Mutant; Characterization (materials science); Process (computing); Genetics; Computer science; Biology; Gene; Physics; Telecommunications","score_opus":0.015061865527682294,"score_gpt":0.25563746483364913,"score_spread":0.24057559930596684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2768643229","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9765291,0.0010192253,0.01582019,0.00053763564,0.0002463822,0.00021569603,0.003578906,0.00018634617,0.0018665397],"genre_scores_gemma":[0.9451315,0.0010135887,0.026705934,0.00022800473,0.000060863542,0.0003849329,0.016913798,0.0002860014,0.009275446],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997768,0.000022784143,0.000032679476,0.000058376765,0.000051661667,0.000057844973],"domain_scores_gemma":[0.99967325,0.00005590357,0.000104204235,0.000042806136,0.000042313604,0.00008159801],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004172239,0.00088883383,0.0006107932,0.00066183275,0.0005445404,0.00042070073,0.0010244631,0.0006306118,0.0015362385],"category_scores_gemma":[0.00030628717,0.00037091537,0.0009845119,0.0006587624,0.0005660594,0.00039705692,0.00037575906,0.0014492846,0.0012555772],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014470215,0.00006984917,0.00022367919,0.00008211631,0.000012181116,0.00013891472,0.000047475045,0.000110012224,0.9979638,0.00038256418,0.000100005,0.0007247766],"study_design_scores_gemma":[0.000046917987,0.000096349184,0.0029133568,0.000013645658,0.00006045897,0.0005446707,0.00008289596,0.001930309,0.9856673,0.0000941239,0.008529738,0.000020258112],"about_ca_topic_score_codex":0.0020169683,"about_ca_topic_score_gemma":0.0012710298,"teacher_disagreement_score":0.0020169683,"about_ca_system_score_codex":0.0009215908,"about_ca_system_score_gemma":0.0005227485,"threshold_uncertainty_score":0.006686628},"labels":[],"label_agreement":null},{"id":"W2769148830","doi":"10.4049/jimmunol.194.supp.132.8","title":"USP18 as a novel regulator of PD-1 and IFNAR1-mediated immune dysfunction (IRM11P.629)","year":2015,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Immune system; Biology; Innate immune system; Immunology; Immunity; Acquired immune system; TLR7; Chronic infection; Regulator; Blockade; Immune checkpoint; Downregulation and upregulation; Cancer research; Receptor; Immunotherapy; Gene; Toll-like receptor; Genetics","score_opus":0.017481320063902864,"score_gpt":0.23838298667588595,"score_spread":0.22090166661198307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2769148830","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98829055,0.0031908685,0.0047245696,0.0003823142,0.00006969012,0.000037595644,0.00086053606,0.00019430039,0.0022495873],"genre_scores_gemma":[0.99470997,0.0005114166,0.0021342929,0.0001024568,0.00002110663,0.000024488114,0.0006254887,0.00002643618,0.0018444072],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991345,0.000019083023,0.000011461946,0.00002406392,0.000018874698,0.000013169176],"domain_scores_gemma":[0.999876,0.000012579553,0.00006191684,0.000011254816,0.0000082630295,0.00003003635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002034807,0.00034627854,0.00021563545,0.0002302607,0.00015679581,0.0002998764,0.00026556329,0.00043949694,0.0020068074],"category_scores_gemma":[0.000109666384,0.00013741097,0.00022596483,0.00010237948,0.00027094554,0.00013709307,0.00020457068,0.0005598814,0.0006000601],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002861744,0.000037332564,0.00058594544,0.000034764005,0.0000075026937,0.0005467822,0.0000058397945,0.00010217057,0.99571085,0.00035424423,0.00016472778,0.0021636784],"study_design_scores_gemma":[0.000114526556,0.00045823446,0.014815454,0.000017472017,0.000039677314,0.0059286235,0.000025984615,0.003332883,0.96684074,0.00046697498,0.007949146,0.000010266128],"about_ca_topic_score_codex":0.000107784064,"about_ca_topic_score_gemma":0.00011719628,"teacher_disagreement_score":0.0020068074,"about_ca_system_score_codex":0.00028600806,"about_ca_system_score_gemma":0.00012174836,"threshold_uncertainty_score":0.0067133904},"labels":[],"label_agreement":null},{"id":"W2770141606","doi":"10.1128/jvi.01637-17","title":"Tumor Necrosis Factor-Mediated Survival of CD169 <sup>+</sup> Cells Promotes Immune Activation during Vesicular Stomatitis Virus Infection","year":2017,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network","funders":"National Institutes of Health; Fonds National de la Recherche Luxembourg; Deutsche Forschungsgemeinschaft; Guts UK Charity; Alexander von Humboldt-Stiftung","keywords":"Vesicular stomatitis virus; Biology; Immune system; Virology; Tumor necrosis factor alpha; Virus; Vesicular stomatitis Indiana virus; Rhabdoviridae; Immunology","score_opus":0.012199248963506505,"score_gpt":0.24507072715396203,"score_spread":0.23287147819045553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2770141606","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99673957,0.00085270277,0.0012384556,0.000048544687,0.00002959671,0.00001489724,0.00017448666,0.00003464971,0.00086719706],"genre_scores_gemma":[0.997447,0.00028043723,0.00076488534,0.000029339735,0.000018155362,0.00002110994,0.00035966982,0.000008579341,0.001070753],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998982,0.00002059541,0.000012645579,0.00001619802,0.00001684103,0.00003560085],"domain_scores_gemma":[0.9999062,0.00001312576,0.000023318487,0.000012713226,0.000012164433,0.000032503303],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011496385,0.00023084036,0.00016045291,0.000110085275,0.00012493039,0.00030845508,0.00011923214,0.00016137291,0.0011737602],"category_scores_gemma":[0.00007498175,0.00007579128,0.00015806622,0.000061957486,0.00018553153,0.0001638008,0.00019610839,0.00035976132,0.00055514276],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026620197,0.000019448311,0.00031317506,0.000027584372,0.0000015096887,0.0000790336,0.000011149218,0.000018818444,0.9986099,0.000066807894,0.000026692533,0.0005595969],"study_design_scores_gemma":[0.000026845124,0.0005544982,0.009666532,0.000012351613,0.000008946604,0.0007984241,0.00008647121,0.0007274555,0.9848952,0.00010877493,0.0031099948,0.0000043995906],"about_ca_topic_score_codex":0.0001355191,"about_ca_topic_score_gemma":0.0001352929,"teacher_disagreement_score":0.0011737602,"about_ca_system_score_codex":0.00015375257,"about_ca_system_score_gemma":0.00009639207,"threshold_uncertainty_score":0.003926635},"labels":[],"label_agreement":null},{"id":"W2772206037","doi":"10.1016/j.celrep.2017.11.058","title":"Diverging mRNA and Protein Networks in Activated Microglia Reveal SRSF3 Suppresses Translation of Highly Upregulated Innate Immune Transcripts","year":2017,"lang":"en","type":"article","venue":"Cell Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":100,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research; ALS Society of Canada","keywords":"Innate immune system; Microglia; Translation (biology); Downregulation and upregulation; Cell biology; Messenger RNA; Immune system; Biology; Immunology; Inflammation; Gene; Genetics","score_opus":0.01137904415754295,"score_gpt":0.22668411296082278,"score_spread":0.21530506880327982,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2772206037","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99599385,0.0006327459,0.002432993,0.000070861104,0.00001674024,0.0000071342847,0.00022291303,0.00005956835,0.00056318037],"genre_scores_gemma":[0.9961545,0.0002716669,0.0020537025,0.000056468256,0.00000984582,0.000027629852,0.00039386738,0.000033378066,0.0009989688],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998585,0.000018165689,0.000010346746,0.00003507751,0.000040214076,0.00003773107],"domain_scores_gemma":[0.9998913,0.000025986265,0.00003259162,0.000013870592,0.000011603492,0.000024732359],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014289259,0.00018007727,0.0002089837,0.0001633058,0.00015485297,0.00022405568,0.00009708606,0.00019527323,0.00092062366],"category_scores_gemma":[0.00012678877,0.00010187891,0.00022077997,0.000103327126,0.00025828625,0.00013109803,0.00011950373,0.00041490188,0.0002637214],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006324454,0.0000037548577,0.000116546486,0.000006060562,0.0000015714662,0.000020820384,0.0000063684097,0.000014287003,0.9993919,0.000029320116,0.000007652812,0.00033842068],"study_design_scores_gemma":[0.000007762406,0.00012862755,0.009130951,0.0000023372634,0.000010774906,0.00023420384,0.000041284788,0.00072182843,0.9889098,0.00011216163,0.00069744734,0.0000029392247],"about_ca_topic_score_codex":0.0003329301,"about_ca_topic_score_gemma":0.0007557199,"teacher_disagreement_score":0.00092062366,"about_ca_system_score_codex":0.00022612586,"about_ca_system_score_gemma":0.00017017881,"threshold_uncertainty_score":0.003079772},"labels":[],"label_agreement":null},{"id":"W2772605120","doi":"10.1038/s41598-017-17689-0","title":"DUSP1 regulates apoptosis and cell migration, but not the JIP1-protected cytokine response, during Respiratory Syncytial Virus and Sendai Virus infection","year":2017,"lang":"en","type":"article","venue":"Scientific Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Université de Montréal; Institut National de la Santé et de la Recherche Médicale","keywords":"Sendai virus; Virus; Virology; Apoptosis; Respiratory system; Cytokine; Biology; Immunology","score_opus":0.012951743495393008,"score_gpt":0.23804022629247468,"score_spread":0.22508848279708166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2772605120","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9911391,0.006231622,0.0011246026,0.00013048867,0.00004586257,0.00001585051,0.00018259621,0.00004047805,0.0010894047],"genre_scores_gemma":[0.99564207,0.0017885818,0.00064612046,0.000057492467,0.000023976805,0.000033986194,0.0002820037,0.000010817382,0.0015149537],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999848,0.000029537017,0.000011860318,0.000025764364,0.00003137666,0.000053444146],"domain_scores_gemma":[0.99990964,0.000008415261,0.000024132865,0.0000069971784,0.000016575854,0.00003431025],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018487127,0.00033850005,0.00024244218,0.0001827757,0.00019164644,0.00020617347,0.00012973891,0.00025015933,0.0006899406],"category_scores_gemma":[0.00013180925,0.00012591743,0.0002225254,0.00012625275,0.00031433607,0.000223292,0.00021177932,0.0005818684,0.00024122474],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026462486,0.000025558087,0.00034341824,0.00005702685,0.0000046235355,0.000064666674,0.00002479167,0.00003208369,0.9977506,0.000064688385,0.000045903056,0.0013219652],"study_design_scores_gemma":[0.00004732875,0.00051818223,0.06085369,0.000019067622,0.000034275177,0.0005720233,0.00014474549,0.0011783014,0.93254054,0.00016727335,0.003915657,0.000008933457],"about_ca_topic_score_codex":0.0003331628,"about_ca_topic_score_gemma":0.0004998999,"teacher_disagreement_score":0.0006899406,"about_ca_system_score_codex":0.0002250781,"about_ca_system_score_gemma":0.00018833017,"threshold_uncertainty_score":0.0023081303},"labels":[],"label_agreement":null},{"id":"W2775757101","doi":"","title":"The Mechanistic Function of the NOD-like Receptor NLRX1 in Apoptosis and Cell Death in the Nervous System","year":2015,"lang":"en","type":"dissertation","venue":"TSpace","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Toronto","keywords":"Wallerian degeneration; Apoptosis; Biology; Cell biology; Nervous system; Axotomy; Central nervous system; Programmed cell death; Neuroscience; Cancer research; Biochemistry","score_opus":0.013329278307096215,"score_gpt":0.2654978207652397,"score_spread":0.25216854245814346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2775757101","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7785164,0.16735664,0.01082868,0.0063876696,0.00041537386,0.00012300724,0.00057274126,0.000087036984,0.03571239],"genre_scores_gemma":[0.89092106,0.0644216,0.0034340725,0.0004148564,0.00018643781,0.00007714316,0.00052642165,0.000013333062,0.040005066],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993706,0.000013755539,0.000004523567,0.000014034363,0.000016772106,0.000013810061],"domain_scores_gemma":[0.99996793,0.000004237852,0.0000060067505,0.0000024055262,0.000009371507,0.000010084955],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002570834,0.00025016768,0.00012783913,0.00017709433,0.00026418344,0.00034893525,0.00020532872,0.0002674094,0.0013643003],"category_scores_gemma":[0.00010857559,0.000072671646,0.00019162743,0.00010257737,0.00032161555,0.00041717,0.00019358104,0.00050595665,0.0004433482],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010109094,0.00020719401,0.0012179826,0.0009525118,0.000041581,0.0008134893,0.00025912025,0.0010154304,0.91619176,0.017796284,0.0020439236,0.058449786],"study_design_scores_gemma":[0.00020039733,0.0012658328,0.04122445,0.00045337356,0.00010097755,0.002836516,0.0009795759,0.0025765966,0.8364153,0.014047805,0.099864475,0.000034641555],"about_ca_topic_score_codex":0.00020312888,"about_ca_topic_score_gemma":0.00029280587,"teacher_disagreement_score":0.0013643003,"about_ca_system_score_codex":0.00045356515,"about_ca_system_score_gemma":0.00035685577,"threshold_uncertainty_score":0.0045639873},"labels":[],"label_agreement":null},{"id":"W2777612080","doi":"10.1016/j.synbio.2017.12.004","title":"Methods and approaches to disease mechanisms using systems kinomics","year":2017,"lang":"en","type":"review","venue":"Synthetic and Systems Biotechnology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency; University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Kinome; Kinase; Phosphatase; Biology; Computational biology; Function (biology); Cell biology; Biochemistry; Enzyme","score_opus":0.29325012148836255,"score_gpt":0.3836609212876707,"score_spread":0.09041079979930816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2777612080","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002458509,0.9863056,0.0071567344,0.0009384191,0.00055326376,0.000027109098,0.00007202818,0.000069078706,0.0046318993],"genre_scores_gemma":[0.0030369847,0.9899497,0.003910671,0.0005020661,0.00048180652,0.00004552879,0.000098292214,0.000013040126,0.0019619206],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996482,0.00006232307,0.000029392877,0.0000849156,0.00014614634,0.000028952558],"domain_scores_gemma":[0.9995652,0.00023056578,0.000040324496,0.000029681632,0.00009867784,0.00003564827],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010377216,0.0012809138,0.0014441601,0.0026217701,0.00039877114,0.0013231781,0.001416906,0.0015991536,0.005809584],"category_scores_gemma":[0.0008310961,0.0003607845,0.00071806024,0.0015549739,0.0012806271,0.0022235794,0.001141688,0.0025201521,0.0028744082],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050891867,0.00010614193,0.00030847162,0.016829519,0.0001267337,0.00032216284,0.000129246,0.0017349228,0.010507882,0.054131884,0.0329365,0.88281566],"study_design_scores_gemma":[0.0000072704775,0.000071418,0.00038779742,0.0014388904,0.00005491848,0.0007583826,0.00005019769,0.00044887688,0.002867264,0.015220317,0.9786583,0.000036349753],"about_ca_topic_score_codex":0.0008444573,"about_ca_topic_score_gemma":0.0009144882,"teacher_disagreement_score":0.005809584,"about_ca_system_score_codex":0.0012855834,"about_ca_system_score_gemma":0.0010528077,"threshold_uncertainty_score":0.019434988},"labels":[],"label_agreement":null},{"id":"W2779096414","doi":"10.1128/jvi.01535-17","title":"Identification of Residues Controlling Restriction versus Enhancing Activities of IFITM Proteins on Entry of Human Coronaviruses","year":2017,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":135,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; National Natural Science Foundation of China","keywords":"Biology; Viral entry; Coronavirus; Middle East respiratory syndrome coronavirus; Tyrosine; Transmembrane protein; Alanine; Phosphorylation; Amino acid; Aspartic acid; Tyrosine phosphorylation; Cell biology; Virology; Biochemistry; Coronavirus disease 2019 (COVID-19); Receptor; Virus; Viral replication","score_opus":0.032600366248394436,"score_gpt":0.32327725100243143,"score_spread":0.29067688475403697,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2779096414","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99879175,0.0003473677,0.00045161034,0.000018685125,0.0000054431393,0.00000829073,0.00009836416,0.000007809611,0.00027067136],"genre_scores_gemma":[0.9988669,0.00011779071,0.0006166191,0.00002085331,0.0000030418757,0.000007871297,0.00017042545,0.0000034231305,0.00019300061],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992955,0.000012201782,0.0000076683655,0.000012642913,0.000016412247,0.000021573162],"domain_scores_gemma":[0.9999052,0.000021100097,0.000028069342,0.000008987515,0.000013048715,0.000023664003],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013554108,0.00017733547,0.0001368414,0.00007799395,0.00009802356,0.00013508611,0.00008477781,0.00022526186,0.0006736407],"category_scores_gemma":[0.00016177054,0.00006522989,0.00020914138,0.000072387236,0.00014066295,0.000097491655,0.000077221994,0.00021658577,0.00018880719],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001504562,0.000008601918,0.00047923098,0.000012575696,0.0000023206017,0.000031127725,0.0000056794456,0.000044881028,0.99871373,0.00003291241,0.000008736403,0.0005098809],"study_design_scores_gemma":[0.00002951116,0.00032208505,0.028294744,0.00000855309,0.000015874339,0.00040679055,0.000024879013,0.00087512395,0.9691023,0.00006353515,0.0008511334,0.0000055399983],"about_ca_topic_score_codex":0.00038740356,"about_ca_topic_score_gemma":0.00033015243,"teacher_disagreement_score":0.0006736407,"about_ca_system_score_codex":0.00020545386,"about_ca_system_score_gemma":0.000117168114,"threshold_uncertainty_score":0.002253592},"labels":[],"label_agreement":null},{"id":"W2781794792","doi":"10.1128/jvi.00099-17","title":"Evasion of Cytosolic DNA-Stimulated Innate Immune Responses by Herpes Simplex Virus 1","year":2018,"lang":"en","type":"review","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Natural Science Foundation of China","keywords":"Stimulator of interferon genes; Biology; Innate immune system; Herpes simplex virus; Virology; Virus; Pattern recognition receptor; Interferon; DNA virus; RIG-I; Nucleic acid; DNA; Interferon type I; Sting; Signal transducing adaptor protein; Immune system; TLR7; Gene; Immunology; Signal transduction; Toll-like receptor; Cell biology; Genetics; Genome","score_opus":0.040150396603949555,"score_gpt":0.3435324761573142,"score_spread":0.30338207955336466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2781794792","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00026288343,0.9979882,0.0001497135,0.00021953403,0.00031781,0.000004094928,0.000013724698,0.000009717336,0.0010343425],"genre_scores_gemma":[0.0013455044,0.9972909,0.0001813094,0.00011440069,0.00032285173,0.0000057579523,0.000028275223,0.0000018221076,0.0007091632],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99990165,0.000013465151,0.000017009568,0.000017742566,0.00003697586,0.000013146921],"domain_scores_gemma":[0.99985266,0.00004569005,0.000032717417,0.0000053257077,0.0000374613,0.000026168567],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030968589,0.00058907515,0.00066536077,0.0014966661,0.00021227481,0.0006877859,0.00053948886,0.00059752073,0.0019830065],"category_scores_gemma":[0.0003350095,0.0001855372,0.00021168464,0.0011066925,0.00032355494,0.0010020093,0.00057823723,0.0010869442,0.0014739113],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006674751,0.00004810991,0.00020055931,0.010400819,0.000035772882,0.00021181104,0.0000600125,0.00021050771,0.005053376,0.0030452642,0.022286186,0.9583809],"study_design_scores_gemma":[0.0000073533415,0.00006589573,0.0008551921,0.0014860167,0.000040802002,0.0012267896,0.000044219,0.000060968177,0.0014446783,0.001176753,0.99357843,0.000012947875],"about_ca_topic_score_codex":0.0003119406,"about_ca_topic_score_gemma":0.00048342865,"teacher_disagreement_score":0.0019830065,"about_ca_system_score_codex":0.00037773172,"about_ca_system_score_gemma":0.0005379351,"threshold_uncertainty_score":0.0066338778},"labels":[],"label_agreement":null},{"id":"W2783838719","doi":"10.1371/journal.ppat.1006769","title":"Distinct temporal roles for the promyelocytic leukaemia (PML) protein in the sequential regulation of intracellular host immunity to HSV-1 infection","year":2018,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":105,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Medical Research Council; Imperial College London; Saudi Arabian Cultural Bureau","keywords":"Immunity; Biology; Host (biology); Intracellular; Virology; Immunology; Immune system; Cell biology; Genetics","score_opus":0.02512552266386049,"score_gpt":0.25858296755124793,"score_spread":0.23345744488738746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2783838719","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9827907,0.0062623536,0.007812266,0.000086715576,0.000032587257,0.00003419336,0.0002356904,0.00010201594,0.0026435538],"genre_scores_gemma":[0.9928268,0.001702846,0.0033962294,0.000036171245,0.000008383068,0.000041329113,0.00017693547,0.000011893048,0.0017994328],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983287,0.000019580077,0.000015174572,0.000048677415,0.000041784373,0.000041864347],"domain_scores_gemma":[0.99989855,0.00001723002,0.00002864997,0.000013084928,0.000014534754,0.000027980957],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020617817,0.0001999677,0.00017014814,0.00021023661,0.00011158784,0.00053623674,0.00021203389,0.0002722239,0.0008645382],"category_scores_gemma":[0.0001821315,0.00017800854,0.00022333673,0.00010518385,0.00028615206,0.00043540593,0.0003373636,0.00040542113,0.00038828352],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010989711,0.00000652096,0.00028958477,0.000032186184,0.0000018219885,0.000038105718,0.000021425452,0.00003599247,0.997965,0.0002526372,0.000007982153,0.001238915],"study_design_scores_gemma":[0.000007913024,0.00009636838,0.006158058,0.000008620666,0.000006676117,0.0002222447,0.000048647835,0.00054357474,0.991608,0.00013803515,0.0011577298,0.000004203682],"about_ca_topic_score_codex":0.00018234349,"about_ca_topic_score_gemma":0.0002928508,"teacher_disagreement_score":0.0008645382,"about_ca_system_score_codex":0.00027982146,"about_ca_system_score_gemma":0.00019758494,"threshold_uncertainty_score":0.0028921366},"labels":[],"label_agreement":null},{"id":"W2787132402","doi":"10.1016/j.ajpath.2017.12.021","title":"Cytokine Signaling Protein 3 Deficiency in Myeloid Cells Promotes Retinal Degeneration and Angiogenesis through Arginase-1 Up-Regulation in Experimental Autoimmune Uveoretinitis","year":2018,"lang":"en","type":"article","venue":"American Journal Of Pathology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Queen's University; Fight for Sight UK; Queen's University Belfast; Sight Research UK","keywords":"Arginase; SOCS3; Cytokine; Inflammation; Population; Chemokine; Biology; Immunology; Tumor necrosis factor alpha; Macrophage polarization; Immune system; Myeloid; Angiogenesis; Macrophage; Cell biology; Cancer research; Signal transduction; Medicine; Biochemistry; Arginine; In vitro","score_opus":0.011162857408399797,"score_gpt":0.252381829476509,"score_spread":0.24121897206810922,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2787132402","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99795985,0.0006381361,0.00069016014,0.00008669654,0.000037094385,0.000017790884,0.00012470619,0.00004773545,0.00039774703],"genre_scores_gemma":[0.99745864,0.00036392364,0.00081327657,0.000048372178,0.000015807782,0.00004673442,0.00014189024,0.00001600773,0.0010953303],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995561,0.00008709323,0.000059980015,0.000059555092,0.00008234066,0.00015493092],"domain_scores_gemma":[0.99967456,0.000030808395,0.0001280172,0.00003401428,0.000020279906,0.00011233447],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034489052,0.0005089525,0.00041784663,0.00051529513,0.00030506667,0.00040515393,0.0002258156,0.00046013104,0.0013341461],"category_scores_gemma":[0.00021931154,0.00024838562,0.00047056552,0.00022629084,0.00059520337,0.0003596113,0.00026338015,0.0014744751,0.00035633604],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011794786,0.000080793514,0.00024754854,0.000040232797,0.0000057634693,0.00017039952,0.000023800072,0.000031991272,0.997586,0.00010965264,0.0000340345,0.0004903242],"study_design_scores_gemma":[0.00033927496,0.0012851263,0.013756056,0.000017849683,0.00009789652,0.00096332055,0.00016126914,0.0011921143,0.9803631,0.00022541433,0.0015823847,0.000016195014],"about_ca_topic_score_codex":0.00047667034,"about_ca_topic_score_gemma":0.0007923658,"teacher_disagreement_score":0.0013341461,"about_ca_system_score_codex":0.00044760012,"about_ca_system_score_gemma":0.00039251707,"threshold_uncertainty_score":0.004463196},"labels":[],"label_agreement":null},{"id":"W2789244789","doi":"10.1002/jlb.2mir0917-383r","title":"On taking the STING out of immune activation","year":2018,"lang":"en","type":"review","venue":"Journal of Leukocyte Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Sting; Stimulator of interferon genes; Biology; Interferon; Immune system; IRF3; Innate immune system; Immunology; Signal transduction; Immunity; Interferon regulatory factors; Interferon type I; Transcription factor; Signal transducing adaptor protein; Cytotoxic T cell; IRF7; Cell biology; Cancer research; Gene; Genetics","score_opus":0.08670172704212284,"score_gpt":0.3722080364591283,"score_spread":0.2855063094170055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2789244789","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021365049,0.996585,0.00015098251,0.00069157634,0.0007517063,0.0000033415474,0.00001056783,0.000008459902,0.0015847938],"genre_scores_gemma":[0.0013912817,0.99500823,0.00019878414,0.00077195634,0.000891507,0.000005705146,0.000024178855,0.000003153976,0.0017051803],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99985826,0.000024861913,0.000021268339,0.000026950367,0.000050822786,0.000017918434],"domain_scores_gemma":[0.99982506,0.000076717006,0.000020959025,0.000006896055,0.00004461977,0.000025771831],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039825562,0.0006457886,0.0007318293,0.0011894567,0.00031511916,0.00086540444,0.00063531386,0.0010273493,0.0029873105],"category_scores_gemma":[0.00041083756,0.00019236337,0.0003067989,0.00086200266,0.00061368005,0.0015723619,0.0006475019,0.0024422226,0.0020798736],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008947466,0.000044720848,0.00023073939,0.008233181,0.00003969305,0.00032643406,0.00014595107,0.00015926643,0.004925908,0.011198641,0.043274604,0.9313314],"study_design_scores_gemma":[0.0000070509896,0.000046562815,0.00033548765,0.001277641,0.000020242067,0.0008465822,0.00004741019,0.000032595457,0.0007157248,0.00197357,0.9946892,0.00000796387],"about_ca_topic_score_codex":0.000379196,"about_ca_topic_score_gemma":0.0007122427,"teacher_disagreement_score":0.0029873105,"about_ca_system_score_codex":0.00044704284,"about_ca_system_score_gemma":0.0006745015,"threshold_uncertainty_score":0.009993613},"labels":[],"label_agreement":null},{"id":"W2789603520","doi":"10.1371/journal.pone.0194612","title":"In silico identification of microRNAs predicted to regulate N-myristoyltransferase and Methionine Aminopeptidase 2 functions in cancer and infectious diseases","year":2018,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Research Institute in Oncology and Hematology; CancerCare Manitoba; University of Winnipeg","funders":"Prostate Cancer Fight Foundation; Canada Foundation for Innovation; Canadian Institutes of Health Research; University of Winnipeg; Manitoba Medical Service Foundation","keywords":"Myristoylation; microRNA; Biology; Signal transduction; Gene silencing; In silico; Cell biology; Computational biology; Genetics; Gene; Phosphorylation","score_opus":0.016177783196423424,"score_gpt":0.24882961087198815,"score_spread":0.23265182767556472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2789603520","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9571973,0.0031574015,0.03028209,0.00025500386,0.000088400055,0.00024425893,0.005477652,0.0013371473,0.001960764],"genre_scores_gemma":[0.9426159,0.0006275675,0.044733785,0.00020595828,0.000024526715,0.00017019607,0.010724504,0.00011100585,0.0007865862],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9994733,0.00014640126,0.000039687613,0.00017482546,0.000096442884,0.000069481895],"domain_scores_gemma":[0.99934393,0.00044995284,0.00008527102,0.000016781652,0.000049339127,0.000054683118],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010461893,0.00081326236,0.001352177,0.0010029591,0.00047101313,0.00075597817,0.00040668744,0.0005642817,0.0015882191],"category_scores_gemma":[0.0011625129,0.00038277035,0.0019210798,0.0005587382,0.00020246758,0.00017129381,0.00031531512,0.00041933818,0.00061159406],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009064595,0.0011180621,0.22546096,0.0018212263,0.0025360545,0.0045129703,0.00024277518,0.11348452,0.55223775,0.0016738296,0.004808668,0.083038636],"study_design_scores_gemma":[0.0006003049,0.0021922607,0.13653122,0.00013571633,0.002618769,0.00313386,0.00024506735,0.72056144,0.12284182,0.0014647847,0.009561503,0.000113220936],"about_ca_topic_score_codex":0.0014512511,"about_ca_topic_score_gemma":0.0026870295,"teacher_disagreement_score":0.0015882191,"about_ca_system_score_codex":0.00041536943,"about_ca_system_score_gemma":0.00094472984,"threshold_uncertainty_score":0.0055328608},"labels":[],"label_agreement":null},{"id":"W2792462695","doi":"10.1093/jcag/gwy008.187","title":"A186 INVESTIGATION OF THE PROTECTIVE ROLE OF MIR-122 AGAINST CELLULAR SENSORS OF RNA AT THE 5’ TERMINUS OF HEPATITIS C VIRUS GENOME","year":2018,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; McGill University","funders":"","keywords":"Protein kinase R; RNA; RNA silencing; Biology; Hepatitis C virus; microRNA; Virology; RIG-I; RNA virus; RNA interference; Cell biology; RNA-binding protein; Virus; Molecular biology; Protein kinase A; Kinase; Gene; Genetics; Mitogen-activated protein kinase kinase","score_opus":0.005272074070578024,"score_gpt":0.18597903385094508,"score_spread":0.18070695978036705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2792462695","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9452168,0.039630417,0.0060459026,0.00052365183,0.00019813185,0.000062322186,0.00028196894,0.00007169806,0.007969047],"genre_scores_gemma":[0.98684293,0.007570128,0.0023163895,0.00016448832,0.000065198954,0.000023822226,0.00029177096,0.000007883535,0.0027173283],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999306,0.00001396819,0.0000051786806,0.000014969282,0.000022029162,0.000013298842],"domain_scores_gemma":[0.9999417,0.000010926688,0.000013713858,0.0000056339077,0.000013089311,0.000014949263],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016574899,0.00023919922,0.00017229994,0.0001662208,0.00014029231,0.00027374228,0.00014906161,0.00025776276,0.001004401],"category_scores_gemma":[0.0001288301,0.00007578831,0.00018808863,0.00009752978,0.00015384013,0.00029313882,0.00011405309,0.0002782593,0.00024050227],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024972795,0.00004713517,0.00046754294,0.00017491376,0.000009387111,0.00008185699,0.000015921756,0.00008347497,0.98898983,0.0003611679,0.0000818111,0.009437167],"study_design_scores_gemma":[0.000035136607,0.0019790053,0.009568858,0.000021711603,0.000047654987,0.0008184272,0.00005669606,0.0018225242,0.97275263,0.00036266123,0.012522741,0.000011970874],"about_ca_topic_score_codex":0.00012113599,"about_ca_topic_score_gemma":0.00013855394,"teacher_disagreement_score":0.001004401,"about_ca_system_score_codex":0.00018293488,"about_ca_system_score_gemma":0.00015503661,"threshold_uncertainty_score":0.003360033},"labels":[],"label_agreement":null},{"id":"W2793461258","doi":"10.3390/v10020056","title":"Virus Infection Triggers MAVS Polymers of Distinct Molecular Weight","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Biology; Cell biology; Endoplasmic reticulum; Mitochondrion; Chemistry; Biochemistry","score_opus":0.014038818908207221,"score_gpt":0.2668956857133443,"score_spread":0.2528568668051371,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793461258","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99180424,0.0013526335,0.004660719,0.000077252014,0.00003521306,0.0000306822,0.00025781486,0.00008038188,0.0017010208],"genre_scores_gemma":[0.9945909,0.00048816073,0.0023349177,0.00006641711,0.000017279966,0.00003777104,0.00074252585,0.00003003812,0.0016920067],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999816,0.000027981423,0.000016899428,0.000052913078,0.000044060773,0.000042119333],"domain_scores_gemma":[0.9998332,0.00003953057,0.00004480357,0.00002555086,0.000020403353,0.000036520596],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001150563,0.00031697407,0.00017073566,0.00026966498,0.00014410066,0.0003873243,0.00014194769,0.00035130326,0.00078957656],"category_scores_gemma":[0.00016924704,0.0001885873,0.000297012,0.00014387495,0.00017764654,0.00034346976,0.00032411714,0.00081054674,0.00044499693],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040125953,0.000007307995,0.00010447968,0.000010222193,0.0000031439358,0.00002585802,0.000010593848,0.000010061708,0.999435,0.00008701626,0.000010647662,0.0002555768],"study_design_scores_gemma":[0.000005834325,0.00010808599,0.010273609,0.0000061555734,0.000011754355,0.000299595,0.000039159702,0.0009504168,0.98659164,0.00017116737,0.0015367911,0.0000058091023],"about_ca_topic_score_codex":0.00010932141,"about_ca_topic_score_gemma":0.00013322983,"teacher_disagreement_score":0.00078957656,"about_ca_system_score_codex":0.00025407862,"about_ca_system_score_gemma":0.00008094131,"threshold_uncertainty_score":0.0026414394},"labels":[],"label_agreement":null},{"id":"W2795755247","doi":"10.22215/etd/2009-09101","title":"Regulation of NF-kB and p53 in the liver and skeletal muscle of the freeze tolerant wood frog, rana sylvatica","year":2009,"lang":"en","type":"dissertation","venue":"","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Heritage; Library and Archives Canada","funders":"","keywords":"Rana; Skeletal muscle; Biology; Humanities; Anatomy; Art","score_opus":0.006819601104689312,"score_gpt":0.2216777448278473,"score_spread":0.21485814372315798,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2795755247","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99782073,0.0007583541,0.00025987005,0.00004825481,0.000007950369,0.0000038053784,0.0001806499,0.000007610528,0.0009127697],"genre_scores_gemma":[0.98956525,0.00072834134,0.000428228,0.000047709476,0.000007948327,0.000018199906,0.00083632587,0.000011713752,0.0083562825],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999509,0.000007244012,0.0000028489203,0.000014616277,0.000009054678,0.000015276644],"domain_scores_gemma":[0.9999331,0.000012207598,0.00001782518,0.000007803316,0.000012854015,0.00001610337],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008126738,0.00013314816,0.00010278643,0.00022478256,0.00021096914,0.00018016847,0.00011424596,0.00016222111,0.001960759],"category_scores_gemma":[0.00008167425,0.00010776454,0.00016947585,0.0000868602,0.000221769,0.00019040897,0.00013662015,0.00024212987,0.00040477695],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015820519,0.000018171166,0.0013949742,0.00001911715,0.0000048756056,0.000056940073,0.000056957833,0.00002100832,0.997006,0.00006520055,0.000036695183,0.0011618872],"study_design_scores_gemma":[0.00005788223,0.0006907847,0.61678,0.000029186009,0.00006135321,0.00077051437,0.0006688094,0.0007476069,0.37645075,0.00025104775,0.0034776172,0.000014479655],"about_ca_topic_score_codex":0.0015904087,"about_ca_topic_score_gemma":0.0038307256,"teacher_disagreement_score":0.001960759,"about_ca_system_score_codex":0.00017752917,"about_ca_system_score_gemma":0.000100263154,"threshold_uncertainty_score":0.006559372},"labels":[],"label_agreement":null},{"id":"W2795782087","doi":"10.1007/978-3-319-74932-7_10","title":"Viral Manipulation of the Host Metabolic Network","year":2018,"lang":"en","type":"review","venue":"Experientia supplementum","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval","funders":"","keywords":"Biology; Viral life cycle; Cell metabolism; Metabolic pathway; Host (biology); Metabolic network; Virus; Intracellular; Glutamine; Metabolism; Lipid metabolism; Intracellular parasite; Computational biology; Viral replication; Virology; Cell biology; Amino acid; Genetics; Biochemistry","score_opus":0.028072032101522967,"score_gpt":0.3094715767073629,"score_spread":0.28139954460583994,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2795782087","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00025356622,0.99345434,0.0004920033,0.0005598523,0.0018896926,0.000005315718,0.000036573078,0.00001742513,0.0032913242],"genre_scores_gemma":[0.0020929575,0.99267465,0.00039187793,0.00036080665,0.00086416956,0.0000078522025,0.0000851275,0.0000057092716,0.0035169309],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99988866,0.000013528173,0.000014064257,0.000022696388,0.00004334022,0.00001766912],"domain_scores_gemma":[0.99982786,0.00005690287,0.000024628478,0.000012189027,0.000044085253,0.000034297565],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005330195,0.00085362303,0.00075710827,0.0011487888,0.00023541061,0.0010138579,0.0007141794,0.00088184647,0.0032427437],"category_scores_gemma":[0.00044605398,0.00026999452,0.0002809509,0.0011376668,0.0006846002,0.0010944455,0.00085173565,0.0019982185,0.0021460024],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020340514,0.00007389785,0.000111579655,0.009218293,0.000057352212,0.00021822935,0.0000553244,0.00037915923,0.012864401,0.0096647665,0.050134342,0.91701925],"study_design_scores_gemma":[0.000012453361,0.000043662225,0.000337143,0.00073982246,0.000037204263,0.00032921962,0.000025966494,0.000064268,0.002445133,0.002290102,0.993662,0.0000131022025],"about_ca_topic_score_codex":0.0006172724,"about_ca_topic_score_gemma":0.0012926372,"teacher_disagreement_score":0.0032427437,"about_ca_system_score_codex":0.0007417154,"about_ca_system_score_gemma":0.0008020782,"threshold_uncertainty_score":0.010848045},"labels":[],"label_agreement":null},{"id":"W2796581040","doi":"10.1172/jci98814","title":"JAK1/2 inhibition with baricitinib in the treatment of autoinflammatory interferonopathies","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":521,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Izaak Walton Killam Health Centre","funders":"National Institute of Allergy and Infectious Diseases; Rosetrees Trust; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Eli Lilly and Company","keywords":"Medicine; Internal medicine","score_opus":0.05548603744449432,"score_gpt":0.34178881645158027,"score_spread":0.28630277900708595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2796581040","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97116345,0.025042098,0.00045179977,0.00044335113,0.00007322731,0.00007736197,0.00019139914,0.00005868681,0.0024984614],"genre_scores_gemma":[0.99394727,0.004456019,0.0005513654,0.00017974144,0.000047238987,0.000046462414,0.0002891871,0.0000057935654,0.0004768917],"study_design_codex":"design_other","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.9999032,0.000022225819,0.0000113050155,0.000011726579,0.000020946836,0.000030505962],"domain_scores_gemma":[0.99988174,0.00002552117,0.00004723502,0.0000071791337,0.000014496469,0.000023756016],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037476723,0.0002585531,0.0003609075,0.00020297013,0.00013406965,0.00028470246,0.00020240252,0.00018897287,0.0009526545],"category_scores_gemma":[0.00024064747,0.00005740971,0.00023357393,0.00017715631,0.000120536955,0.0001403224,0.00015814115,0.0006222732,0.00015274371],"study_design_candidate":"nonrandomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.031025471,0.003008142,0.030308183,0.0016315338,0.00092041906,0.0019768975,0.00025779678,0.0062006977,0.25389218,0.0011727158,0.007324349,0.6622817],"study_design_scores_gemma":[0.04372993,0.08860278,0.39498472,0.0011986984,0.003037299,0.024511969,0.0003946823,0.025904842,0.30956215,0.0018181115,0.10607288,0.000181965],"about_ca_topic_score_codex":0.0003909233,"about_ca_topic_score_gemma":0.0016667998,"teacher_disagreement_score":0.0009526545,"about_ca_system_score_codex":0.00042555283,"about_ca_system_score_gemma":0.0002909237,"threshold_uncertainty_score":0.0031869411},"labels":[],"label_agreement":null},{"id":"W2797881454","doi":"10.1016/j.celrep.2018.03.054","title":"Mind Bomb Regulates Cell Death during TNF Signaling by Suppressing RIPK1’s Cytotoxic Potential","year":2018,"lang":"en","type":"article","venue":"Cell Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; European Research Council; Biotechnology and Biological Sciences Research Council; National Institute of Allergy and Infectious Diseases; Medical Research Council; Medical Research Council Canada; Science Foundation Ireland; Irish Research Council for Science, Engineering and Technology; NIHR Biomedical Research Centre, Royal Marsden NHS Foundation Trust/Institute of Cancer Research; National Institutes of Health; Cancer Research UK; National Institute of General Medical Sciences; National Institute for Health and Care Research; Lister Institute of Preventive Medicine; Worldwide Cancer Research; Breast Cancer Now","keywords":"RIPK1; Programmed cell death; Ubiquitin; FADD; Cell biology; Ubiquitin ligase; Necroptosis; Cytotoxic T cell; Apoptosis; Tumor necrosis factor alpha; Chemistry; Biology; Cancer research; Caspase; Biochemistry; Immunology","score_opus":0.007376365157093018,"score_gpt":0.21874314011984278,"score_spread":0.21136677496274975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2797881454","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932463,0.0024739595,0.0022356247,0.000111671216,0.00002769035,0.000011812317,0.00016342192,0.0000753323,0.0016540593],"genre_scores_gemma":[0.99720144,0.00052040373,0.0008860537,0.00003542201,0.00000437153,0.0000082937995,0.00015853104,0.000010902482,0.0011746172],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999038,0.0000168061,0.0000075306316,0.00002127217,0.000021089163,0.0000295332],"domain_scores_gemma":[0.99993896,0.0000070612423,0.000020387168,0.000008094905,0.000006475862,0.000019026704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008978887,0.0002953964,0.00024105322,0.00012449715,0.00017975253,0.0002879707,0.00016437875,0.00023734476,0.0012398922],"category_scores_gemma":[0.00008749249,0.0001130501,0.00020104423,0.00011302316,0.0002507434,0.00025852647,0.00021395691,0.0004420417,0.0003725038],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012048831,0.000009644245,0.00020245458,0.000014390825,0.0000026492983,0.000035242614,0.000006812807,0.000027023974,0.998669,0.00008733451,0.000020467867,0.0008044356],"study_design_scores_gemma":[0.000015992386,0.00014503571,0.0051810606,0.0000028320292,0.0000091983,0.000248471,0.000021734691,0.0005362894,0.9923448,0.000058786845,0.0014325068,0.0000032995888],"about_ca_topic_score_codex":0.00021316236,"about_ca_topic_score_gemma":0.0003328428,"teacher_disagreement_score":0.0012398922,"about_ca_system_score_codex":0.0003356751,"about_ca_system_score_gemma":0.00012793313,"threshold_uncertainty_score":0.004147887},"labels":[],"label_agreement":null},{"id":"W2800160618","doi":"10.1155/2018/9480497","title":"Viruses Seen by Our Cells: The Role of Viral RNA Sensors","year":2018,"lang":"en","type":"review","venue":"Journal of Immunology Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Pattern recognition receptor; Innate immune system; Receptor; Biology; RNA; Immune system; Endosome; Chemokine; RIG-I; Nucleic acid; Virology; Interferon; Cell biology; Toll-like receptor; Cytoplasm; TLR3; Immunology; Gene; Genetics","score_opus":0.07563652653076566,"score_gpt":0.402234123005316,"score_spread":0.32659759647455033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2800160618","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00020313867,0.99711704,0.00017615296,0.00039206241,0.00047355867,0.0000034036361,0.00001163983,0.000008302158,0.0016147132],"genre_scores_gemma":[0.0011019428,0.9967434,0.0002432091,0.00033146824,0.00034987807,0.0000056808663,0.000026209855,0.0000023855798,0.0011958119],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998447,0.000026447673,0.000020456953,0.000029002467,0.000060695646,0.000018650102],"domain_scores_gemma":[0.9998448,0.00006327211,0.000020611404,0.0000054843395,0.000049141076,0.000016728722],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031798016,0.00061625347,0.0007736156,0.0012633511,0.00030818084,0.0012511541,0.0005230852,0.0011654922,0.0027792328],"category_scores_gemma":[0.00038662527,0.00017497041,0.0003231335,0.0008160224,0.0004842701,0.0014079155,0.00067312474,0.0015743574,0.0022075241],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052849857,0.00003240722,0.00031633407,0.008704303,0.000038393173,0.00040211054,0.00017717102,0.00012713994,0.007353564,0.0055698664,0.02801616,0.94920963],"study_design_scores_gemma":[0.0000036535735,0.000041766543,0.0006506603,0.0014914749,0.00003199147,0.0021886202,0.00011992804,0.000029021421,0.001389615,0.001453393,0.9925863,0.00001352696],"about_ca_topic_score_codex":0.0004902841,"about_ca_topic_score_gemma":0.00060014386,"teacher_disagreement_score":0.0027792328,"about_ca_system_score_codex":0.00040802502,"about_ca_system_score_gemma":0.00059327966,"threshold_uncertainty_score":0.00929749},"labels":[],"label_agreement":null},{"id":"W2800255316","doi":"10.1038/s41586-018-0050-1","title":"SAMHD1 acts at stalled replication forks to prevent interferon induction","year":2018,"lang":"en","type":"article","venue":"Nature","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":450,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Cancer Research","funders":"MSDAVENIR; Agence Nationale de la Recherche","keywords":"SAMHD1; Cell biology; Biology; DNA replication; DNA damage; DNA; Genetics; Gene; Reverse transcriptase; RNA","score_opus":0.011854385525111597,"score_gpt":0.2924739057675565,"score_spread":0.2806195202424449,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2800255316","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9303484,0.013606144,0.03718767,0.0018159742,0.0015421693,0.00008850555,0.0011806419,0.00251389,0.011716708],"genre_scores_gemma":[0.986211,0.00080558914,0.0047123223,0.0002401843,0.00013000415,0.000027303835,0.0007169221,0.00012069971,0.0070359856],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996001,0.00005375175,0.000024598035,0.00011215644,0.00007913891,0.00013033362],"domain_scores_gemma":[0.99942833,0.00009188777,0.00014862407,0.00011506715,0.000093380026,0.00012265293],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000629917,0.0005167991,0.00043581187,0.00041875074,0.0007629541,0.0008206173,0.0006032906,0.00080556184,0.006691634],"category_scores_gemma":[0.0006890076,0.00041576003,0.00044521308,0.00013189249,0.00052990357,0.0008504814,0.000755758,0.0011835379,0.002285234],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032906723,0.000034701694,0.0009185866,0.00011830366,0.000019474892,0.00009293592,0.000025971958,0.00021263467,0.98994726,0.0011475388,0.0010121133,0.0061415415],"study_design_scores_gemma":[0.000018185638,0.000115602386,0.003528242,0.000007959019,0.000006808684,0.00012688486,0.000026094705,0.0008959083,0.9890083,0.00041858174,0.0058390005,0.0000083933255],"about_ca_topic_score_codex":0.00023892206,"about_ca_topic_score_gemma":0.00040163376,"teacher_disagreement_score":0.006691634,"about_ca_system_score_codex":0.0006475103,"about_ca_system_score_gemma":0.00037569943,"threshold_uncertainty_score":0.022385776},"labels":[],"label_agreement":null},{"id":"W2801502233","doi":"10.1186/s12920-018-0335-0","title":"Whole transcriptome analysis reveals differential gene expression profile reflecting macrophage polarization in response to influenza A H5N1 virus infection","year":2018,"lang":"en","type":"article","venue":"BMC Medical Genomics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; SickKids Foundation; University of Toronto","funders":"National Institute of General Medical Sciences; Health and Medical Research Fund; National Institutes of Health; National Human Genome Research Institute; University Grants Committee","keywords":"Biology; Influenza A virus subtype H5N1; Virus; Virology; Transcriptome; Influenza A virus; Interferon; Viral replication; Virulence; Gene; Viral pathogenesis; RIG-I; Gene expression profiling; Microarray analysis techniques; Gene expression; Immunology; Innate immune system; Immune system; Genetics","score_opus":0.026447520848461727,"score_gpt":0.31983209441271554,"score_spread":0.2933845735642538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2801502233","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98817503,0.0013164617,0.00275193,0.000058255184,0.000025134867,0.000023092298,0.0068881824,0.00004469942,0.0007172347],"genre_scores_gemma":[0.9811275,0.0013166356,0.004696246,0.00014561373,0.000022868579,0.00014598636,0.010577971,0.00002906639,0.0019380596],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999021,0.000009832828,0.0000054265697,0.00003800444,0.000020715928,0.000023754419],"domain_scores_gemma":[0.99991703,0.000025037596,0.000020557492,0.0000064004344,0.000018941231,0.00001202789],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012454584,0.00017364165,0.00036314063,0.0002782102,0.00018007265,0.00029231914,0.00009659874,0.00020888807,0.0009532161],"category_scores_gemma":[0.0001438043,0.00009264561,0.00037337554,0.0003622629,0.00015602609,0.0001511327,0.000174762,0.00032395244,0.0002865485],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042477818,0.000026902984,0.013497613,0.0001761702,0.00004973774,0.0000641058,0.00011312568,0.00023700009,0.9809934,0.00005866947,0.00019948027,0.004159108],"study_design_scores_gemma":[0.000014054086,0.0006384113,0.84836984,0.00004121034,0.00017147968,0.0004037037,0.00059172144,0.005359208,0.14044157,0.00030825305,0.0036260555,0.00003449485],"about_ca_topic_score_codex":0.00059303205,"about_ca_topic_score_gemma":0.0007720665,"teacher_disagreement_score":0.0009532161,"about_ca_system_score_codex":0.00012372872,"about_ca_system_score_gemma":0.0001623912,"threshold_uncertainty_score":0.0031888485},"labels":[],"label_agreement":null},{"id":"W2802422839","doi":"10.1093/nar/gky273","title":"miR-122 does not impact recognition of the HCV genome by innate sensors of RNA but rather protects the 5′ end from the cellular pyrophosphatases, DOM3Z and DUSP11","year":2018,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University of Saskatchewan","funders":"Canadian Institutes of Health Research","keywords":"Biology; RNA; Gene knockdown; Pyrophosphatases; Hepatitis C virus; Cell biology; Subgenomic mRNA; Genome; Virology; RNA interference; RNA virus; RIG-I; Genetics; Virus; Gene; Enzyme; Biochemistry","score_opus":0.028693419690549476,"score_gpt":0.2895988613321853,"score_spread":0.26090544164163587,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2802422839","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99153817,0.001779688,0.0028189253,0.0001454305,0.00009303185,0.00002534144,0.0006170636,0.00014575235,0.002836747],"genre_scores_gemma":[0.9947436,0.0004941397,0.0015070274,0.00008178479,0.000009448957,0.00002516756,0.00069127016,0.000028707573,0.002418813],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980146,0.00003169697,0.000026548067,0.00004321337,0.00006378701,0.000033262582],"domain_scores_gemma":[0.9998555,0.000026509653,0.000036413425,0.00002039875,0.000019456696,0.00004161551],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012104351,0.0002395532,0.00029230522,0.00010228668,0.0001402305,0.0003965461,0.000192341,0.00029433717,0.0016230582],"category_scores_gemma":[0.00019959795,0.00016012111,0.00022795699,0.000085698324,0.00021980768,0.00022541269,0.00017570586,0.00055231096,0.0005193613],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012953294,0.000017974891,0.0001139553,0.000036839017,0.0000046550126,0.000020690612,0.0000058165747,0.000030940108,0.9988287,0.00006719703,0.00003475755,0.00070889445],"study_design_scores_gemma":[0.000011935224,0.0002556121,0.0023987826,0.0000033706835,0.000017257576,0.00014120065,0.000017501434,0.0007651131,0.9938793,0.00003568083,0.0024700742,0.00000407591],"about_ca_topic_score_codex":0.0004992092,"about_ca_topic_score_gemma":0.0006081208,"teacher_disagreement_score":0.0016230582,"about_ca_system_score_codex":0.00021045824,"about_ca_system_score_gemma":0.00018463821,"threshold_uncertainty_score":0.005429685},"labels":[],"label_agreement":null},{"id":"W2802535166","doi":"10.1038/s41467-018-04075-1","title":"Vibrio vulnificus quorum-sensing molecule cyclo(Phe-Pro) inhibits RIG-I-mediated antiviral innate immunity","year":2018,"lang":"en","type":"article","venue":"Nature Communications","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Commercializations Promotion Agency for R and D Outcomes; National Research Foundation; Korea Research Institute of Chemical Technology; Yonsei University; Ministry of Science, ICT and Future Planning; National Research Foundation of Korea; McGill University","keywords":"Innate immune system; MDA5; RIG-I; Quorum sensing; Pattern recognition receptor; Biology; Microbiology; Pathogen-associated molecular pattern; Interferon; Vibrio vulnificus; Sendai virus; Immune system; Virology; Cell biology; Virulence; Gene; Bacteria; Virus; Immunology; RNA interference; RNA; Biochemistry; Genetics","score_opus":0.017083138350669016,"score_gpt":0.29021259095349516,"score_spread":0.2731294526028262,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2802535166","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927738,0.0020186496,0.0011679729,0.00022845675,0.000062029205,0.000026215346,0.00024139922,0.00005493749,0.0034265197],"genre_scores_gemma":[0.9973991,0.0006178767,0.00044356516,0.000054042503,0.000017157621,0.000014620595,0.0001807569,0.0000055472565,0.0012673734],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991083,0.000021412941,0.0000061284604,0.000010840039,0.000022031836,0.000028791437],"domain_scores_gemma":[0.9999223,0.000025603094,0.000015919259,0.000011040081,0.0000068777103,0.00001817213],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009162025,0.00018689783,0.00016802178,0.00006952827,0.000083007486,0.0002079497,0.00012687173,0.00018215147,0.0016008797],"category_scores_gemma":[0.00012472543,0.00005746974,0.00012278049,0.00004311479,0.00018058659,0.000105103536,0.00014905194,0.00034760055,0.00022897864],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021550708,0.000041469244,0.0001527064,0.000035252873,0.0000035591102,0.000032670494,0.000005710262,0.00007819983,0.9975374,0.00007690263,0.00008004185,0.0017406327],"study_design_scores_gemma":[0.000024968736,0.000581051,0.0031741858,0.000006053185,0.0000068611334,0.0001541355,0.000014312941,0.00057646126,0.99328506,0.000036000543,0.0021383478,0.0000025130812],"about_ca_topic_score_codex":0.00036498337,"about_ca_topic_score_gemma":0.0004845328,"teacher_disagreement_score":0.0016008797,"about_ca_system_score_codex":0.0001289251,"about_ca_system_score_gemma":0.0001885609,"threshold_uncertainty_score":0.005355537},"labels":[],"label_agreement":null},{"id":"W2802660058","doi":"10.3389/fimmu.2018.00829","title":"Understanding Viral dsRNA-Mediated Innate Immune Responses at the Cellular Level Using a Rainbow Trout Model","year":2018,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University; University of Waterloo","funders":"","keywords":"RNA silencing; MDA5; Innate immune system; Biology; Interferon; Receptor; RNA; Virology; Molecular biology; Cell biology; Gene; RNA interference; Biochemistry","score_opus":0.07851829246234983,"score_gpt":0.26864974017415116,"score_spread":0.19013144771180135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2802660058","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9569956,0.00402025,0.033368055,0.00048575673,0.000094616546,0.00019658607,0.0010263807,0.00021504468,0.0035977524],"genre_scores_gemma":[0.9563761,0.0042825183,0.030121874,0.000256288,0.000032096166,0.00027274017,0.00087645685,0.000035203775,0.0077466597],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998573,0.000011388357,0.0000107945025,0.000042109987,0.000039140778,0.00003924641],"domain_scores_gemma":[0.99995947,0.000003963566,0.000013004785,0.0000035090607,0.0000088698125,0.000011188993],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024710587,0.00048564744,0.00040507864,0.00031121637,0.00038815345,0.00051298813,0.0005167787,0.0005239345,0.0010209578],"category_scores_gemma":[0.00007181732,0.00020139437,0.0006437626,0.00018253726,0.00037978604,0.00072960346,0.00051843445,0.0010743026,0.00040199308],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058623795,0.000027087379,0.00056760776,0.000071752474,0.000004638769,0.000046734862,0.000029364846,0.00035653106,0.9977563,0.00031767704,0.000029270012,0.00073440024],"study_design_scores_gemma":[0.000068929556,0.0026763035,0.01779118,0.00006516977,0.00014681528,0.0005651967,0.00045891086,0.01370173,0.9522219,0.0014592275,0.010758289,0.0000863649],"about_ca_topic_score_codex":0.0049548717,"about_ca_topic_score_gemma":0.00906796,"teacher_disagreement_score":0.0049548717,"about_ca_system_score_codex":0.0010704303,"about_ca_system_score_gemma":0.00070472463,"threshold_uncertainty_score":0.009852052},"labels":[],"label_agreement":null},{"id":"W2803553304","doi":"10.4049/jimmunol.1701569","title":"TRIM29 Negatively Regulates the Type I IFN Production in Response to RNA Virus","year":2018,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":100,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Houston Methodist Research Institute; Institute of Genetics; Wellcome Trust","keywords":"Biology; Innate immune system; Virology; Interferon; RNA virus; Virus; RNA; Immunity; Interferon type I; Immune system; Ubiquitin ligase; Spleen; Microbiology; Ubiquitin; Immunology; Gene; Genetics","score_opus":0.01724272949892221,"score_gpt":0.27090102230959096,"score_spread":0.25365829281066876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2803553304","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99158937,0.0019749475,0.0035651757,0.00016358585,0.000053907654,0.00002333121,0.0006215663,0.00008126713,0.0019268516],"genre_scores_gemma":[0.99575186,0.00033077836,0.0010408954,0.00007630958,0.000009403033,0.000012236226,0.00046949906,0.000014227556,0.0022949206],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998603,0.000027003727,0.000012948748,0.000035264336,0.000030068148,0.000034419787],"domain_scores_gemma":[0.99986446,0.000015572445,0.000035751185,0.000021113527,0.000018145296,0.000044950102],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012485166,0.00020543956,0.00019499805,0.00015386609,0.00018962861,0.00026489823,0.0001803345,0.00031830135,0.0017558318],"category_scores_gemma":[0.00011343377,0.00010433057,0.00024163723,0.0000778974,0.00019459389,0.00017614906,0.00020908893,0.00050299504,0.00087532843],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009079102,0.0000075914786,0.00027330132,0.000017397628,0.0000022545908,0.000058289017,0.0000052356554,0.000027158763,0.99903584,0.00005085266,0.000042558127,0.00038875747],"study_design_scores_gemma":[0.000008532426,0.00008573803,0.009983961,0.0000063844127,0.000009387012,0.00040647376,0.000034232846,0.0012618164,0.98583233,0.0000709836,0.0022958673,0.00000426047],"about_ca_topic_score_codex":0.00025766276,"about_ca_topic_score_gemma":0.000309533,"teacher_disagreement_score":0.0017558318,"about_ca_system_score_codex":0.00025533437,"about_ca_system_score_gemma":0.00012110008,"threshold_uncertainty_score":0.005873859},"labels":[],"label_agreement":null},{"id":"W2805015236","doi":"10.1128/jvi.00841-18","title":"Herpes Simplex Virus 1 Tegument Protein VP22 Abrogates cGAS/STING-Mediated Antiviral Innate Immunity","year":2018,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":189,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; McGill University; Jewish General Hospital","funders":"National Natural Science Foundation of China","keywords":"Biology; Innate immune system; Viral tegument; Herpes simplex virus; Stimulator of interferon genes; Interferon; DNA virus; Virology; Viral replication; Virus; Gene knockdown; Immune system; Gene; Immunology; Genetics","score_opus":0.012539181519702248,"score_gpt":0.26746226314871663,"score_spread":0.2549230816290144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2805015236","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950466,0.0023450276,0.0013613267,0.00006271263,0.00006201181,0.000020345411,0.00017962305,0.0000740854,0.00084824144],"genre_scores_gemma":[0.99690163,0.00069737085,0.0005911334,0.000029736315,0.000011651952,0.000020557554,0.00028754782,0.0000135168875,0.001446851],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998362,0.000032014264,0.00001816563,0.000021270811,0.00004476646,0.000047562844],"domain_scores_gemma":[0.9999211,0.000012820829,0.000021793267,0.000012794801,0.0000072612606,0.000024176818],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010886836,0.0005388801,0.00032619404,0.00019929386,0.00011733203,0.00031309633,0.00021349065,0.0002468414,0.0010901744],"category_scores_gemma":[0.00008668685,0.00012210762,0.00025808366,0.00012457221,0.0002605809,0.0001868939,0.00016913911,0.0005934999,0.00031766866],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006280859,0.000030484553,0.00006459423,0.000026309794,0.000005354552,0.000022383969,0.000004488019,0.000040325238,0.9991528,0.00005942975,0.000026869422,0.00050417415],"study_design_scores_gemma":[0.000009997059,0.00024402802,0.0013808336,0.0000045794804,0.00001296088,0.000105109204,0.00001447618,0.000865769,0.9958282,0.00002782369,0.0015029551,0.000003338255],"about_ca_topic_score_codex":0.0004733958,"about_ca_topic_score_gemma":0.00043391413,"teacher_disagreement_score":0.0010901744,"about_ca_system_score_codex":0.00027247655,"about_ca_system_score_gemma":0.00019047197,"threshold_uncertainty_score":0.0036469698},"labels":[],"label_agreement":null},{"id":"W2805310402","doi":"10.1038/s41467-018-04759-8","title":"UBXN3B positively regulates STING-mediated antiviral immune responses","year":2018,"lang":"en","type":"article","venue":"Nature Communications","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"National Institute of Allergy and Infectious Diseases; DHHS Office of the Secretary; National Institutes of Health; U.S. Department of Health and Human Services; Howard Hughes Medical Institute","keywords":"Sting; Immune system; Biology; Immunology; Virology; Computational biology; Medicine; Physics","score_opus":0.016723643699042168,"score_gpt":0.30143727611961824,"score_spread":0.28471363242057607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2805310402","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9925524,0.002840158,0.0018844396,0.0001019882,0.00003279964,0.000007313538,0.00061172614,0.00008570594,0.0018835682],"genre_scores_gemma":[0.9960621,0.0006348045,0.0007714338,0.00004115014,0.000006955367,0.000007746237,0.00038554554,0.000014682165,0.0020754072],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999114,0.000014440547,0.0000085565725,0.000024104893,0.000021575199,0.000019851246],"domain_scores_gemma":[0.9999217,0.0000071780373,0.000028751389,0.0000070840806,0.0000074416744,0.000027987264],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001078039,0.00024483362,0.00016144387,0.00013689777,0.00020639808,0.00026280124,0.000109511515,0.00015349315,0.0023751594],"category_scores_gemma":[0.0000591661,0.000085486274,0.00013911749,0.00010896278,0.00021652569,0.00014640253,0.00020992653,0.00027301276,0.0004742845],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000086909764,0.0000045891024,0.0004818787,0.000018211978,0.0000016156175,0.000034855544,0.000004801497,0.000016492473,0.99871933,0.00005787473,0.00003948769,0.0005340067],"study_design_scores_gemma":[0.000015831125,0.00011035766,0.05047276,0.00001999271,0.000015106653,0.0005454861,0.00005969518,0.0011902158,0.9433273,0.00013553308,0.004103007,0.0000047228514],"about_ca_topic_score_codex":0.00037538528,"about_ca_topic_score_gemma":0.0006421984,"teacher_disagreement_score":0.0023751594,"about_ca_system_score_codex":0.00025894065,"about_ca_system_score_gemma":0.00012918549,"threshold_uncertainty_score":0.007945716},"labels":[],"label_agreement":null},{"id":"W2806022879","doi":"10.1038/s41598-018-22400-y","title":"Effect of human very low-density lipoproteins on cardiotrophin-like cytokine factor 1 (CLCF1) activity","year":2018,"lang":"en","type":"article","venue":"Scientific Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; University of Alberta","keywords":"Apolipoprotein E; Lipoprotein; Very low-density lipoprotein; Receptor; Apolipoprotein B; Low-density lipoprotein receptor-related protein 8; Cytokine; Biology; Immunoprecipitation; Biochemistry; Chemistry; Endocrinology; Cell biology; Internal medicine; Cholesterol; Immunology; Medicine; Gene","score_opus":0.01058274644933167,"score_gpt":0.26545104184985185,"score_spread":0.2548682954005202,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2806022879","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953609,0.0030413265,0.00039750803,0.000090383495,0.00005513631,0.000022201199,0.00027504607,0.000015719512,0.000741775],"genre_scores_gemma":[0.99609226,0.0009692986,0.00069550175,0.00009092723,0.000027702134,0.000023131832,0.0007506134,0.0000064515716,0.0013442242],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998227,0.000078835066,0.000015386342,0.00002012267,0.00002353395,0.000039508217],"domain_scores_gemma":[0.99982846,0.000086253895,0.000016539454,0.00001648478,0.00001949443,0.00003262708],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003440677,0.0002862656,0.00014785792,0.00015280636,0.000082817176,0.0002498909,0.00008212362,0.00020859252,0.0013195606],"category_scores_gemma":[0.00033186816,0.0000570221,0.00015369452,0.00008454845,0.00012597039,0.00007017312,0.0001337095,0.00026109346,0.0004336819],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035778198,0.00024506502,0.0011894166,0.00008351247,0.000013733804,0.00013301785,0.000038734852,0.00010126841,0.9904772,0.0000556496,0.00015076678,0.003933951],"study_design_scores_gemma":[0.0001951031,0.0032179644,0.012254437,0.000029945491,0.000028861894,0.0003299096,0.000053386106,0.0011455305,0.9795547,0.000052127143,0.0031308294,0.0000071744207],"about_ca_topic_score_codex":0.00043822746,"about_ca_topic_score_gemma":0.00043102255,"teacher_disagreement_score":0.0013195606,"about_ca_system_score_codex":0.00014172087,"about_ca_system_score_gemma":0.00011433217,"threshold_uncertainty_score":0.0044143796},"labels":[],"label_agreement":null},{"id":"W2809946807","doi":"10.71781/32477","title":"Le médicament épigénétique 5-Azacytidine stabilise l’ARN messager du récepteur des lipoprotéines de basse densité (LDLR) via une voie IRE1α/EGFR/ERK1/2- dépendante","year":2017,"lang":"fr","type":"dissertation","venue":"Papyrus : Institutional Repository (Université de Montréal)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Molecular biology; LDL receptor; Chemistry; Biology; Cholesterol; Biochemistry; Lipoprotein","score_opus":0.005400266588542265,"score_gpt":0.18671624672096562,"score_spread":0.18131598013242337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2809946807","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.84493685,0.05479795,0.024870636,0.0041506095,0.0022283408,0.00033130808,0.0061633997,0.0020439748,0.06047689],"genre_scores_gemma":[0.91868144,0.015582299,0.008903269,0.0013503721,0.00014573993,0.0003039205,0.0029870903,0.00017219066,0.051873613],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998005,0.00002918191,0.000013856893,0.000068288995,0.000059439702,0.000028731101],"domain_scores_gemma":[0.99988663,0.000028640805,0.000020921094,0.00001532288,0.000034013712,0.00001445944],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019080516,0.00026997752,0.0003691618,0.00023202419,0.0002818048,0.00088372093,0.00028353496,0.0005356368,0.00768908],"category_scores_gemma":[0.00036307846,0.00020304484,0.0004665353,0.00013846939,0.00026999865,0.00033161073,0.00024562672,0.0014275793,0.0017495346],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009823911,0.00019324732,0.0019448448,0.0004512687,0.00008229256,0.00019031699,0.00017640532,0.0004936033,0.93643874,0.0025255177,0.0028879445,0.053633522],"study_design_scores_gemma":[0.00033155104,0.0018483185,0.0147647485,0.00012702707,0.00037494863,0.00081773783,0.0002921181,0.00281331,0.77427673,0.0015001278,0.20280986,0.00004360563],"about_ca_topic_score_codex":0.0036719735,"about_ca_topic_score_gemma":0.005721508,"teacher_disagreement_score":0.00768908,"about_ca_system_score_codex":0.00071828335,"about_ca_system_score_gemma":0.00069292786,"threshold_uncertainty_score":0.025722563},"labels":[],"label_agreement":null},{"id":"W2810432295","doi":"10.1016/j.bbrc.2018.06.083","title":"MCPIP1 negatively regulate cellular antiviral innate immune responses through DUB and disruption of TRAF3-TBK1-IKKε complex","year":2018,"lang":"en","type":"article","venue":"Biochemical and Biophysical Research Communications","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Natural Science Foundation of China","keywords":"Innate immune system; IRF3; Cell biology; Biology; Immune system; Ubiquitin; TANK-binding kinase 1; Signal transducing adaptor protein; Signal transduction; Immunology; Genetics; Gene","score_opus":0.10753452511389965,"score_gpt":0.3860822223130458,"score_spread":0.2785476971991461,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2810432295","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98714197,0.0023408346,0.007204271,0.0003429734,0.00009572433,0.000030369574,0.00052105257,0.00019054822,0.0021322945],"genre_scores_gemma":[0.99662364,0.0002493207,0.0012350129,0.00004898112,0.000005680991,0.000020774773,0.0002625445,0.00003561842,0.0015184821],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997576,0.000030743795,0.000019079213,0.000060828155,0.00004762678,0.000084146755],"domain_scores_gemma":[0.9998822,0.000011078968,0.00003607958,0.000018674991,0.000014534517,0.000037332087],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000196361,0.000481593,0.00022655551,0.00017864293,0.00048060063,0.00049860054,0.00045992763,0.00038305327,0.0017922327],"category_scores_gemma":[0.00016121635,0.00020390429,0.00037500792,0.00014680148,0.00052393845,0.0005105024,0.0005248352,0.0011252676,0.0005600503],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016378776,0.000015273592,0.00015415942,0.000038192775,0.000006141153,0.000044504148,0.000013167764,0.00007987243,0.9985323,0.00037271268,0.00007034025,0.0005094328],"study_design_scores_gemma":[0.000009689582,0.000018196473,0.0019607665,0.000003110017,0.000010428489,0.00012402888,0.000026241783,0.0011085978,0.9946956,0.00010916978,0.0019291447,0.0000050122067],"about_ca_topic_score_codex":0.0005446824,"about_ca_topic_score_gemma":0.00072587753,"teacher_disagreement_score":0.0017922327,"about_ca_system_score_codex":0.0008639758,"about_ca_system_score_gemma":0.00032785142,"threshold_uncertainty_score":0.006268561},"labels":[],"label_agreement":null},{"id":"W2884264032","doi":"10.1038/s41416-018-0188-5","title":"STING agonist therapy in combination with PD-1 immune checkpoint blockade enhances response to carboplatin chemotherapy in high-grade serous ovarian cancer","year":2018,"lang":"en","type":"article","venue":"British Journal of Cancer","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":193,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Kingston Health Sciences Centre; Queen's University","funders":"Canadian Institutes of Health Research; Imperial College London","keywords":"Carboplatin; Medicine; Chemotherapy; Agonist; Immune checkpoint; Cancer research; Internal medicine; Immunotherapy; Immunology; Oncology; Immune system; Receptor; Cisplatin","score_opus":0.010231777456984118,"score_gpt":0.2731240424598853,"score_spread":0.2628922650029012,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2884264032","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998014,0.0009952399,0.00010637833,0.00005839729,0.000028989065,0.000030556042,0.00006523566,0.000030541098,0.000670604],"genre_scores_gemma":[0.9980044,0.00074343756,0.0002194371,0.000044033062,0.000017297734,0.000030970434,0.00017776151,0.0000051437046,0.00075754296],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999933,0.000016272303,0.0000064009823,0.0000067922315,0.000012430789,0.000025132733],"domain_scores_gemma":[0.9999372,0.000010586826,0.000012079378,0.000006079027,0.0000033947294,0.00003079821],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012016524,0.0001607385,0.0004073793,0.00018570392,0.00008208659,0.00026237287,0.00014561132,0.00018087264,0.00095412746],"category_scores_gemma":[0.00012575496,0.00009610791,0.00015794374,0.00017533866,0.00014398419,0.00013157242,0.00011109711,0.0006808953,0.00014258255],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.016742196,0.0037475375,0.0030825047,0.00039686036,0.00009267303,0.00019707222,0.00014445363,0.0012619065,0.9093105,0.00017540423,0.0011545457,0.06369427],"study_design_scores_gemma":[0.0053005754,0.14423059,0.114446305,0.00010967079,0.00045430346,0.0013405897,0.00025578405,0.007956556,0.7080759,0.00022322287,0.017561166,0.000045377215],"about_ca_topic_score_codex":0.00044043807,"about_ca_topic_score_gemma":0.0015471624,"teacher_disagreement_score":0.00095412746,"about_ca_system_score_codex":0.0001801592,"about_ca_system_score_gemma":0.00020945887,"threshold_uncertainty_score":0.0031918287},"labels":[],"label_agreement":null},{"id":"W2885188866","doi":"10.1158/1538-7445.am2018-3849","title":"Abstract 3849: Identification and optimization of chemical compounds as potent agonists of human STING with anticancer activity in mice","year":2018,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Sting; Pharmacology; Agonist; Cancer; Stimulator of interferon genes; Medicine; Cancer immunotherapy; In vitro; Melanoma; Innate immune system; Cancer research; Immunotherapy; Chemistry; Immune system; Biochemistry; Immunology; Receptor; Internal medicine","score_opus":0.05348788033366492,"score_gpt":0.39312465295121796,"score_spread":0.33963677261755304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2885188866","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9785381,0.0037962303,0.0069816136,0.00035109927,0.00005981967,0.0005845354,0.0038023829,0.00022886567,0.0056573027],"genre_scores_gemma":[0.95760113,0.0056822672,0.01936112,0.00031986187,0.000029504665,0.00041020915,0.0056673847,0.00005957538,0.010868999],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990904,0.000011153144,0.000009618336,0.00001532128,0.000030516007,0.000024274577],"domain_scores_gemma":[0.9999417,0.000005103752,0.000014117279,0.000005258736,0.000011743381,0.000022073316],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015193217,0.0005362692,0.00036908156,0.0005626825,0.00014193293,0.00021026886,0.00036200983,0.0002681784,0.0029999043],"category_scores_gemma":[0.00008362002,0.00014712421,0.00033577497,0.00044231967,0.000121206365,0.00020170223,0.00016263913,0.00050570164,0.0007121748],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040605187,0.0004863574,0.00029178578,0.00014581672,0.000026358497,0.00013060759,0.000017661325,0.0009479291,0.9850322,0.00034874622,0.00049475045,0.011671798],"study_design_scores_gemma":[0.00035240367,0.007358447,0.002959256,0.000029617642,0.0000989467,0.00028738903,0.000026598173,0.0013077093,0.9738594,0.00013009152,0.0135695385,0.000020575479],"about_ca_topic_score_codex":0.0005416599,"about_ca_topic_score_gemma":0.0013399759,"teacher_disagreement_score":0.0029999043,"about_ca_system_score_codex":0.00027926578,"about_ca_system_score_gemma":0.0004017245,"threshold_uncertainty_score":0.010035694},"labels":[],"label_agreement":null},{"id":"W2885309985","doi":"10.1073/pnas.1806239115","title":"Nitro-fatty acids are formed in response to virus infection and are potent inhibitors of STING palmitoylation and signaling","year":2018,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":292,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Core Research for Evolutional Science and Technology; National Institute of Diabetes and Digestive and Kidney Diseases; Japan Society for the Promotion of Science; Ono Medical Research Foundation; National Institutes of Health; H. Lundbeck A/S; National Institute of General Medical Sciences; Augustinus Fonden; Lundbeckfonden; Japan Agency for Medical Research and Development; Medical Research Council; Aarhus Universitet; American Heart Association","keywords":"Sting; Stimulator of interferon genes; Palmitoylation; Biology; TANK-binding kinase 1; Interferon; Signal transduction; Immunology; Cell biology; Biochemistry; Cytosol; Enzyme; Cysteine","score_opus":0.030874479114154304,"score_gpt":0.293900401539097,"score_spread":0.2630259224249427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2885309985","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97943467,0.010496305,0.0068835793,0.00020091287,0.00010857223,0.00007068151,0.00025639546,0.00009015146,0.002458775],"genre_scores_gemma":[0.98823345,0.0051553166,0.003696909,0.00010610398,0.000029462859,0.000042122774,0.00039116855,0.00001692126,0.0023284703],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987113,0.00003941281,0.000012642765,0.000017838256,0.00003184547,0.000027180333],"domain_scores_gemma":[0.9998311,0.000038563496,0.00005877747,0.000022008995,0.000020217805,0.000029336414],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020783574,0.0003505006,0.00019327416,0.00020413812,0.00013269112,0.00014845154,0.00021190093,0.00031002384,0.0011374344],"category_scores_gemma":[0.00021633996,0.00014299169,0.00022487603,0.0001257715,0.00020047856,0.00021954648,0.00022371244,0.00051058823,0.00026010483],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030717556,0.000026803102,0.00020894104,0.000050709277,0.000011706057,0.000058230366,0.000012309165,0.000103209546,0.9968387,0.0001389631,0.000024937295,0.0022181817],"study_design_scores_gemma":[0.000015581132,0.00030690874,0.0008079185,0.00000800193,0.000013590584,0.00016198299,0.000010334203,0.00022238724,0.9957885,0.000047420013,0.0026146644,0.0000028645368],"about_ca_topic_score_codex":0.00036236062,"about_ca_topic_score_gemma":0.00090249866,"teacher_disagreement_score":0.0011374344,"about_ca_system_score_codex":0.00019261573,"about_ca_system_score_gemma":0.00017800786,"threshold_uncertainty_score":0.003805101},"labels":[],"label_agreement":null},{"id":"W2886925656","doi":"10.1038/s41467-018-05745-w","title":"Nuclear-resident RIG-I senses viral replication inducing antiviral immunity","year":2018,"lang":"en","type":"article","venue":"Nature Communications","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":102,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Hokkaido University; Natural Sciences and Engineering Research Council of Canada; Broad Institute","keywords":"Biology; RNA; Viral replication; Sendai virus; Nuclear export signal; Nuclear localization sequence; Nuclear transport; RIG-I; Virology; Cell nucleus; Cell biology; Cytoplasm; Virus; Genetics; Gene","score_opus":0.021658454445651135,"score_gpt":0.31636053809658465,"score_spread":0.29470208365093353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2886925656","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9816063,0.0026459724,0.0077064163,0.00018334689,0.000044588658,0.00001574586,0.00021909372,0.00017971903,0.0073988014],"genre_scores_gemma":[0.9967674,0.00038024492,0.0017549118,0.000057175963,0.000012598196,0.0000073067367,0.0001191037,0.0000109547545,0.00089040096],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99977344,0.00005187369,0.000014087174,0.000054439006,0.000054996523,0.000051256236],"domain_scores_gemma":[0.9998709,0.00001906264,0.000033434924,0.00002816996,0.0000167077,0.000031704614],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022760495,0.00021415386,0.00019028355,0.00019573983,0.00012762014,0.00046025103,0.00019495716,0.0002872665,0.00097075035],"category_scores_gemma":[0.0001940856,0.00010034541,0.00017598672,0.0000985269,0.00038802635,0.00043667541,0.00041883285,0.00042178854,0.0007608257],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004512099,0.0000033798037,0.0002869119,0.000010742101,9.591704e-7,0.00003475055,0.000012733321,0.000014382994,0.998755,0.00016155165,0.000014287298,0.0006602207],"study_design_scores_gemma":[0.0000092213695,0.00016431024,0.0051950826,0.000011045158,0.000007359086,0.0008944164,0.00010657229,0.00061674224,0.99089557,0.00039009986,0.0017027376,0.0000068614636],"about_ca_topic_score_codex":0.00010308089,"about_ca_topic_score_gemma":0.0001543126,"teacher_disagreement_score":0.00097075035,"about_ca_system_score_codex":0.00028140502,"about_ca_system_score_gemma":0.0002094349,"threshold_uncertainty_score":0.0032474995},"labels":[],"label_agreement":null},{"id":"W2887356477","doi":"10.1158/1538-7445.am2018-5489","title":"Abstract 5489: Characterization of mitochondrial STAT3 (mitostat3) function and the mitoStat3 interactome as a therapeutic strategy for multiple myeloma","year":2018,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network","funders":"","keywords":"STAT3; Biology; Transfection; Gene knockdown; Cancer cell; Cell biology; Transcription factor; Cell culture; Cancer research; Molecular biology; Signal transduction; Cancer; Genetics; Gene","score_opus":0.058783121034714024,"score_gpt":0.3751009235972814,"score_spread":0.3163178025625674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2887356477","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9771061,0.0015688284,0.01405944,0.0004201949,0.00005723658,0.00007555279,0.0038765527,0.00023912982,0.002597063],"genre_scores_gemma":[0.9792899,0.00079369644,0.0077116517,0.00018233182,0.000008570381,0.0000723089,0.0069314507,0.000066118264,0.00494409],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988985,0.000008882891,0.0000073948454,0.000027072212,0.00004501864,0.000021721728],"domain_scores_gemma":[0.9999486,0.000006639608,0.000013994495,0.0000055180412,0.000008729557,0.000016517166],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011085298,0.00024319644,0.00021564963,0.0001987957,0.00022662962,0.00018732868,0.00019999058,0.00033049093,0.0024885754],"category_scores_gemma":[0.00009300925,0.000082135295,0.0003257767,0.00029081112,0.00016558218,0.00014073245,0.0002103116,0.0004424219,0.0007075732],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007022158,0.000011257578,0.0002589806,0.000027343096,0.0000039038055,0.000046867142,0.000008287931,0.000044914985,0.99855083,0.00008723554,0.000071219336,0.0008188036],"study_design_scores_gemma":[0.000018807046,0.00014595398,0.009710748,0.000009530438,0.000016533902,0.0005270782,0.000034552017,0.0016855288,0.9812851,0.000088199784,0.006471844,0.0000060646025],"about_ca_topic_score_codex":0.0007661876,"about_ca_topic_score_gemma":0.0009392218,"teacher_disagreement_score":0.0024885754,"about_ca_system_score_codex":0.00036162365,"about_ca_system_score_gemma":0.00019088687,"threshold_uncertainty_score":0.00832516},"labels":[],"label_agreement":null},{"id":"W2888230285","doi":"10.1038/s41467-018-05861-7","title":"Nrf2 negatively regulates STING indicating a link between antiviral sensing and metabolic reprogramming","year":2018,"lang":"en","type":"article","venue":"Nature Communications","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":286,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Oda og Hans Svenningsens Fond; H. Lundbeck A/S; Augustinus Fonden; Lundbeckfonden; Aarhus Universitet; Fabrikant Einar Willumsens Mindelegat; Novo Nordisk Fonden; Dagmar Marshalls Fond","keywords":"Sting; Reprogramming; Psychological repression; Regulator; Gene knockdown; Stimulator of interferon genes; Biology; Cell biology; Metabolite; Transcription factor; Inducer; Cytosol; Gene expression; Biochemistry; Gene; Enzyme","score_opus":0.0257016070929467,"score_gpt":0.3150932345733636,"score_spread":0.28939162748041686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2888230285","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9785766,0.0063607506,0.0065894257,0.00045531904,0.00008556681,0.000024876248,0.000974037,0.00021271422,0.006720589],"genre_scores_gemma":[0.99315006,0.0012300924,0.0011858073,0.00008859183,0.000016309541,0.000014858094,0.00060280715,0.000015628426,0.0036958335],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998739,0.000025959582,0.0000110681995,0.00003319901,0.000030089066,0.000025799576],"domain_scores_gemma":[0.9999238,0.000010639295,0.000021766242,0.000013432537,0.00001752722,0.000012788675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001320717,0.00032112535,0.00019072785,0.00015901316,0.00014093495,0.00023273496,0.00012183268,0.00020230451,0.0033366438],"category_scores_gemma":[0.00009798263,0.0000721642,0.00025531903,0.000113567214,0.00020012201,0.0002879998,0.00015439797,0.0002443064,0.0005421547],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000099499004,0.000007615097,0.00020860233,0.000032919706,0.000003680914,0.00004252669,0.000005865889,0.000027230586,0.9982399,0.00013388607,0.000043594853,0.0011546431],"study_design_scores_gemma":[0.0000103473185,0.000171229,0.0073371,0.0000090982885,0.000014512925,0.00037471452,0.000032246793,0.00054257637,0.9866165,0.00020553771,0.004681826,0.0000043860377],"about_ca_topic_score_codex":0.00024035074,"about_ca_topic_score_gemma":0.00044132172,"teacher_disagreement_score":0.0033366438,"about_ca_system_score_codex":0.00021909105,"about_ca_system_score_gemma":0.00014696957,"threshold_uncertainty_score":0.011162162},"labels":[],"label_agreement":null},{"id":"W2889452210","doi":"10.1083/jcb.201808118","title":"Pink1/Parkin link inflammation, mitochondrial stress, and neurodegeneration","year":2018,"lang":"en","type":"letter","venue":"The Journal of Cell Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Hewitt Foundation; National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of Environmental Health Sciences; National Institutes of Health","keywords":"Parkin; PINK1; Neurodegeneration; Mitophagy; Inflammation; Proinflammatory cytokine; Mitochondrial DNA; Disease; Mitochondrion; Biology; Medicine; Genetics; Parkinson's disease; Gene; Immunology; Internal medicine; Autophagy; Apoptosis","score_opus":0.009839772544269744,"score_gpt":0.22257023742135879,"score_spread":0.21273046487708905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889452210","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0045896056,0.0076823398,0.0003099577,0.9500997,0.032216877,0.00002070374,0.000084463645,0.000088574896,0.0049076886],"genre_scores_gemma":[0.08960868,0.014647168,0.00094252045,0.6704945,0.19656119,0.000097090335,0.00012926977,0.0000646951,0.027454937],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99947137,0.00018785875,0.00007263954,0.00006857895,0.00012977995,0.000069755835],"domain_scores_gemma":[0.9982394,0.0010019593,0.00017367116,0.000101004654,0.0002690477,0.00021498684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00085201487,0.00046370373,0.0006774847,0.00028211286,0.0011466068,0.0009996673,0.0005628735,0.012696458,0.0050641363],"category_scores_gemma":[0.0069899773,0.00022791549,0.00046807615,0.00018025473,0.0011009008,0.0012479002,0.0006644293,0.010463367,0.0044401367],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030748517,0.00013729572,0.0013951169,0.0001362981,0.000024137446,0.013891552,0.00019347256,0.000106280655,0.0016805844,0.0045359363,0.9391051,0.038486786],"study_design_scores_gemma":[0.00034264548,0.0003518143,0.0033096026,0.0003236378,0.000048283993,0.022838227,0.0004138777,0.0010091898,0.0024499039,0.021031186,0.947823,0.000058715315],"about_ca_topic_score_codex":0.0006014695,"about_ca_topic_score_gemma":0.0009414151,"teacher_disagreement_score":0.012696458,"about_ca_system_score_codex":0.0012915098,"about_ca_system_score_gemma":0.00054446154,"threshold_uncertainty_score":0.01694119},"labels":[],"label_agreement":null},{"id":"W2890087043","doi":"10.3389/fimmu.2018.02061","title":"The Dual Nature of Type I and Type II Interferons","year":2018,"lang":"en","type":"review","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":684,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Immune system; Virus; Viral replication; Biology; Interferon; Immunology; Virology; Collateral damage","score_opus":0.014770767441142713,"score_gpt":0.28521411416631676,"score_spread":0.27044334672517406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2890087043","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00023739247,0.996336,0.00019498268,0.00050367333,0.00045610857,0.0000035098824,0.000010635855,0.0000072219073,0.0022505436],"genre_scores_gemma":[0.0015647167,0.9963386,0.00018982214,0.00019945428,0.00039468813,0.0000050402314,0.000018431709,0.0000013663393,0.0012878868],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99987006,0.000020563193,0.000015595198,0.000024489407,0.000050323146,0.000018992543],"domain_scores_gemma":[0.99983466,0.000065385466,0.000029773986,0.0000056422828,0.000041447063,0.000023014247],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003121188,0.000587706,0.0007019118,0.0012405041,0.00027709655,0.0007869179,0.00046426614,0.00070788077,0.002345771],"category_scores_gemma":[0.0003690017,0.00015195433,0.0002171101,0.0010527757,0.00046857542,0.0010981838,0.0004945085,0.0012908162,0.0016322014],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052479798,0.00003439875,0.00023595367,0.010796037,0.000031553573,0.00026319924,0.00011080515,0.00022105547,0.005744229,0.00830387,0.028570335,0.94563615],"study_design_scores_gemma":[0.000003522298,0.00002955925,0.0005408426,0.0013943746,0.000017472872,0.0009610323,0.00005685883,0.00003490186,0.00057374727,0.0023958904,0.9939849,0.0000069505127],"about_ca_topic_score_codex":0.0003441051,"about_ca_topic_score_gemma":0.00055551645,"teacher_disagreement_score":0.002345771,"about_ca_system_score_codex":0.00046140284,"about_ca_system_score_gemma":0.0008365366,"threshold_uncertainty_score":0.007847369},"labels":[],"label_agreement":null},{"id":"W2895716121","doi":"10.1016/j.molimm.2018.09.002","title":"The core promoter controls basal and inducible expression of duck retinoic acid inducible gene-I (RIG-I)","year":2018,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Biology; RIG-I; Molecular biology; Reporter gene; Retinoic acid; Interferon; Gene; Response element; Promoter; Transfection; Luciferase; Sendai virus; RNA; Gene expression; Genetics","score_opus":0.013212773583377496,"score_gpt":0.24957094534329918,"score_spread":0.2363581717599217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2895716121","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9545847,0.0043541277,0.029009288,0.00023383852,0.00026042256,0.00011456183,0.0025365958,0.00076476845,0.008141551],"genre_scores_gemma":[0.98446333,0.00063901016,0.0067939684,0.00009962415,0.000023853883,0.00006151038,0.0022142385,0.00020725887,0.005497203],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993906,0.000072530536,0.000048172755,0.00016825524,0.000111863235,0.00020860751],"domain_scores_gemma":[0.9993937,0.00010743718,0.00016897327,0.00010410737,0.00009532006,0.000130461],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036582377,0.00059294247,0.00041507237,0.000548634,0.00029216366,0.0007860733,0.00037725127,0.000391708,0.0021779381],"category_scores_gemma":[0.0004135788,0.00038713918,0.0005219904,0.00024058757,0.00058734306,0.0004781881,0.00079017534,0.0010920876,0.0015380715],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015780334,0.000020405862,0.00035598586,0.000027580181,0.0000030488602,0.000031157775,0.00002498231,0.00004381928,0.9972173,0.0005182269,0.00007133698,0.0015283226],"study_design_scores_gemma":[0.000018648743,0.00008758818,0.003825182,0.000019370571,0.000015120918,0.00017169814,0.000063782376,0.0012665765,0.99191767,0.00023250682,0.0023716716,0.00001013902],"about_ca_topic_score_codex":0.0010305513,"about_ca_topic_score_gemma":0.0018397868,"teacher_disagreement_score":0.0021779381,"about_ca_system_score_codex":0.0011484332,"about_ca_system_score_gemma":0.0006537595,"threshold_uncertainty_score":0.008332491},"labels":[],"label_agreement":null},{"id":"W2896312307","doi":"10.1016/j.coi.2018.10.004","title":"Antiviral resistance of stem cells","year":2018,"lang":"en","type":"review","venue":"Current Opinion in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Stem cell; Biology; Interferon; Cell biology; Virology","score_opus":0.07862393657939426,"score_gpt":0.3605575691939236,"score_spread":0.28193363261452936,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896312307","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00020234141,0.9944102,0.00033705324,0.0013209982,0.0020666735,0.0000039798747,0.000018728475,0.0000134230895,0.0016264872],"genre_scores_gemma":[0.002442547,0.9905075,0.0002605096,0.0013709596,0.0030775333,0.000011175836,0.000065192275,0.0000046180503,0.0022599476],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998167,0.000029565626,0.000020546022,0.000039291703,0.00006610501,0.00002778933],"domain_scores_gemma":[0.9997036,0.00012753665,0.000038716287,0.000014338913,0.00007262877,0.000043172935],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00066628464,0.000665775,0.00092641043,0.0007684749,0.00021157709,0.0012681251,0.00075050496,0.0013315179,0.0028999916],"category_scores_gemma":[0.00071538106,0.00017927616,0.0002615013,0.0005802064,0.00067563006,0.001224908,0.00090190594,0.0024794918,0.0015406968],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000091478265,0.00002974615,0.00014113773,0.005325743,0.000032950273,0.00021155259,0.000049762864,0.00022001597,0.005785427,0.008955331,0.05725481,0.9219022],"study_design_scores_gemma":[0.000012550502,0.000033409935,0.0003734828,0.0009964866,0.00003248542,0.000529837,0.000033502558,0.00008147192,0.0011116817,0.0040022586,0.9927817,0.000011080702],"about_ca_topic_score_codex":0.00028550648,"about_ca_topic_score_gemma":0.00047381726,"teacher_disagreement_score":0.0028999916,"about_ca_system_score_codex":0.0005044816,"about_ca_system_score_gemma":0.0008110532,"threshold_uncertainty_score":0.00970149},"labels":[],"label_agreement":null},{"id":"W2897795054","doi":"10.1139/cjas-2017-0046","title":"Cloning, expression, and bioinformatics analysis of a putative pigeon retinoid acid-inducible gene-I","year":2018,"lang":"en","type":"article","venue":"Canadian Journal of Animal Science","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Biology; Complementary DNA; Molecular biology; Open reading frame; Rapid amplification of cDNA ends; Untranslated region; RNA Helicase A; Gene; Messenger RNA; Peptide sequence; RNA; Genetics; Helicase","score_opus":0.01610883543171223,"score_gpt":0.26614014654957885,"score_spread":0.25003131111786664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897795054","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96679115,0.0019382307,0.017461453,0.00028894222,0.00015610649,0.00038527962,0.009788022,0.00023128519,0.0029596742],"genre_scores_gemma":[0.8768085,0.0023450258,0.06488664,0.00038405525,0.000088503206,0.00027915605,0.04175567,0.00020853084,0.0132438885],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999818,0.000013001904,0.000016514019,0.00007640951,0.000040800034,0.000035285957],"domain_scores_gemma":[0.999846,0.000026404387,0.00003639669,0.000017277227,0.000028240216,0.000045655466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001456334,0.00047252214,0.00047846415,0.0005329349,0.00030085433,0.0004467044,0.00028585404,0.00033839163,0.00133781],"category_scores_gemma":[0.00019168519,0.00021623871,0.0007695034,0.00043586714,0.00023284438,0.00017268382,0.00019586584,0.000551851,0.0010569793],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019948771,0.00004935478,0.0007714749,0.00010032002,0.000012032324,0.00028527263,0.00007093607,0.00014311617,0.9959403,0.000107603955,0.00008174142,0.0022384347],"study_design_scores_gemma":[0.00010898498,0.0014875323,0.095053375,0.00007397565,0.00019332767,0.0028358472,0.00037082186,0.008160085,0.85469437,0.0002448886,0.03670231,0.0000745486],"about_ca_topic_score_codex":0.0017879657,"about_ca_topic_score_gemma":0.0015664846,"teacher_disagreement_score":0.0017879657,"about_ca_system_score_codex":0.0004698114,"about_ca_system_score_gemma":0.0003223732,"threshold_uncertainty_score":0.004475355},"labels":[],"label_agreement":null},{"id":"W2899901875","doi":"10.1101/273623","title":"IFNβ and TNFα cooperate to induce a STAT1-independent antiviral and immunoregulatory program via non-canonical STAT2 and IRF9 pathways","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Université de Montréal; McGill University; Génome Québec; Mitacs; University of Ottawa; Cleveland Clinic","keywords":"STAT2; STAT1; Gene; Transcriptional regulation; Tumor necrosis factor alpha; Biology; Transcription factor; Cell biology; Computational biology; Genetics; Immunology; stat","score_opus":0.011666947118331496,"score_gpt":0.2304256823905765,"score_spread":0.21875873527224501,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2899901875","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.986778,0.0024023945,0.005670849,0.00013175941,0.00005444061,0.000037280133,0.0019881867,0.0001613996,0.002775509],"genre_scores_gemma":[0.99023527,0.00075163005,0.002546731,0.00014563762,0.000018718516,0.000043733802,0.0026522113,0.000024572479,0.0035813868],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997849,0.000027762488,0.00001652735,0.00005559346,0.000050156777,0.00006501759],"domain_scores_gemma":[0.9999186,0.000009801121,0.000027797252,0.000011824032,0.000011582603,0.000020402993],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018707202,0.00034699947,0.00019703787,0.0002463653,0.0001406616,0.00030455552,0.00009235215,0.00018582791,0.002593598],"category_scores_gemma":[0.000057723,0.00015116124,0.00032420614,0.00015808415,0.00016280159,0.00016036957,0.00022347773,0.00053174887,0.0008043806],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001070168,0.00001285908,0.0004942992,0.000029307954,0.00000453325,0.000025536145,0.000005846288,0.000034115787,0.9984944,0.00005558358,0.000037146052,0.0006993155],"study_design_scores_gemma":[0.000039217088,0.00031683728,0.063650414,0.000020876401,0.000028199474,0.0006161091,0.000086573855,0.0014794759,0.93002886,0.00025042472,0.0034766356,0.0000063973016],"about_ca_topic_score_codex":0.00019366875,"about_ca_topic_score_gemma":0.00038271365,"teacher_disagreement_score":0.002593598,"about_ca_system_score_codex":0.00020633156,"about_ca_system_score_gemma":0.00018083573,"threshold_uncertainty_score":0.008676469},"labels":[],"label_agreement":null},{"id":"W2900056283","doi":"10.1038/s42003-018-0198-0","title":"RanBP2 regulates the anti-retroviral activity of TRIM5α by SUMOylation at a predicted phosphorylated SUMOylation motif","year":2018,"lang":"en","type":"article","venue":"Communications Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; National Institute of Allergy and Infectious Diseases; Laboratoire d'Excellence EpiGenMed; Agence Nationale de la Recherche; Agence Nationale de Recherches sur le Sida et les Hépatites Virales; Instytut Biologii Medycznej Polskiej Akademii Nauk; National Institutes of Health; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"SUMO protein; Cell biology; Cytoplasm; Biology; In vitro; Phosphorylation; Ubiquitin; Genetics; Gene","score_opus":0.018603013123343462,"score_gpt":0.27839288554099884,"score_spread":0.2597898724176554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900056283","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.987184,0.0026555303,0.005250537,0.00011045438,0.000050933133,0.000018886607,0.000356477,0.00017035384,0.0042027435],"genre_scores_gemma":[0.9935533,0.0005962865,0.0014480003,0.00003054919,0.000007679248,0.000014441856,0.00048591752,0.00003066393,0.0038332457],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987435,0.00002645681,0.0000103925595,0.000030039251,0.000028301627,0.000030497986],"domain_scores_gemma":[0.9999422,0.000006105389,0.000014341077,0.000009354095,0.000010495419,0.000017500717],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012112561,0.00035187477,0.00015112074,0.00015155612,0.0002491192,0.00030895718,0.00019420593,0.00017009916,0.0018664089],"category_scores_gemma":[0.00008262738,0.00014100352,0.00027953138,0.000097916316,0.00019173801,0.00017902165,0.00021801642,0.0003831389,0.00093493186],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005806205,0.0000064889723,0.00015528686,0.000016771412,0.0000027855674,0.000033723518,0.000007641934,0.000022142593,0.998874,0.000086765285,0.00002543287,0.0007108025],"study_design_scores_gemma":[0.00000830799,0.00005030382,0.005671737,0.000005445054,0.000009388007,0.00021087422,0.000024794233,0.00082767225,0.9908251,0.000067935514,0.0022957984,0.000002768349],"about_ca_topic_score_codex":0.00052392075,"about_ca_topic_score_gemma":0.0006797363,"teacher_disagreement_score":0.0018664089,"about_ca_system_score_codex":0.00031789954,"about_ca_system_score_gemma":0.00014645474,"threshold_uncertainty_score":0.0062437057},"labels":[],"label_agreement":null},{"id":"W2900616080","doi":"10.1016/j.dci.2018.11.012","title":"Class A scavenger receptors mediate extracellular dsRNA sensing, leading to downstream antiviral gene expression in a novel American toad cell line, BufoTad","year":2018,"lang":"en","type":"article","venue":"Developmental & Comparative Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Research, Innovation and Science","keywords":"Biology; Scavenger receptor; Extracellular; Cell culture; Cell biology; Receptor; Molecular biology; RNA silencing; Gene expression; Antiviral protein; RNA interference; RNA; Gene; Biochemistry; Genetics","score_opus":0.024613611984634586,"score_gpt":0.2819256320895115,"score_spread":0.2573120201048769,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900616080","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951781,0.0003304916,0.0017455734,0.00008824628,0.000047403963,0.000016448923,0.0005532796,0.00005222867,0.0019881069],"genre_scores_gemma":[0.9907313,0.00027612533,0.0018339744,0.00006009237,0.000019154688,0.000023433075,0.0015600775,0.000029823837,0.005465947],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985576,0.00001813744,0.000011830936,0.000029296207,0.00003787402,0.00004707586],"domain_scores_gemma":[0.99987733,0.00003410226,0.000019752824,0.000020595,0.000022176251,0.000026010572],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013695993,0.00030090855,0.00019497462,0.00037815486,0.00030974287,0.0003959553,0.00023448009,0.00023477447,0.0018474646],"category_scores_gemma":[0.00011170878,0.00014007094,0.0002098771,0.0001714309,0.00018873067,0.00025591077,0.00019412485,0.00068898546,0.00063674385],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000121718826,0.000017632454,0.0003516966,0.000009380454,0.0000019158922,0.000045917302,0.000023776623,0.00001387222,0.9987753,0.00015945442,0.00005827176,0.00042107367],"study_design_scores_gemma":[0.000050222985,0.00036881104,0.011994061,0.0000059340828,0.000025440922,0.00064262986,0.00018628062,0.00132397,0.9793411,0.00007916148,0.0059726024,0.000009768517],"about_ca_topic_score_codex":0.0013650709,"about_ca_topic_score_gemma":0.002647675,"teacher_disagreement_score":0.0018474646,"about_ca_system_score_codex":0.00032539238,"about_ca_system_score_gemma":0.00014924907,"threshold_uncertainty_score":0.0061804056},"labels":[],"label_agreement":null},{"id":"W2900967935","doi":"10.1016/j.vetmic.2018.11.018","title":"Duck innate immune responses to high and low pathogenicity H5 avian influenza viruses","year":2018,"lang":"en","type":"article","venue":"Veterinary Microbiology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University of Alberta","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; Influenza A virus subtype H5N1; Virology; Innate immune system; Tissue tropism; Interferon; Influenza A virus; Viral replication; Immune system; Virus; Virulence; Viral shedding; Microbiology; Tropism; Gene; Immunology; Genetics","score_opus":0.027734001282934656,"score_gpt":0.2889400110064683,"score_spread":0.2612060097235337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900967935","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989742,0.00017028257,0.000085607855,0.000025769947,0.000013918173,0.000003211325,0.00006438406,0.000003783447,0.0006587723],"genre_scores_gemma":[0.997832,0.00008540803,0.0000990365,0.000052640695,0.000005764418,0.0000068776103,0.00008638743,0.0000018807684,0.0018300974],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984694,0.00002266213,0.000008087848,0.000040572362,0.000021166827,0.000060541952],"domain_scores_gemma":[0.9998735,0.00003312256,0.00002145554,0.000010809884,0.00002181421,0.00003926734],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015606284,0.00020201325,0.00018445749,0.00011742582,0.00018430823,0.00038954776,0.00007824955,0.00027291125,0.0015705648],"category_scores_gemma":[0.00021285041,0.00009432013,0.00013743456,0.00003585439,0.00032944308,0.00020308819,0.00014133613,0.00047361723,0.00023203746],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029809352,0.00008711177,0.009935701,0.00006618399,0.000014168327,0.00011227374,0.00017379019,0.00016694808,0.982414,0.00009903012,0.00015149491,0.0037983202],"study_design_scores_gemma":[0.00024967274,0.0058400845,0.47136894,0.00006603473,0.00009342285,0.0009397083,0.0028522431,0.0027111117,0.5116291,0.0004023353,0.0038117724,0.00003546628],"about_ca_topic_score_codex":0.0021633324,"about_ca_topic_score_gemma":0.004441558,"teacher_disagreement_score":0.0021633324,"about_ca_system_score_codex":0.0007203614,"about_ca_system_score_gemma":0.0001782922,"threshold_uncertainty_score":0.00525403},"labels":[],"label_agreement":null},{"id":"W2903504626","doi":"10.1016/j.bbagen.2018.12.001","title":"TRIM8-driven transcriptomic profile of neural stem cells identified glioma-related nodal genes and pathways","year":2018,"lang":"en","type":"article","venue":"Biochimica et Biophysica Acta (BBA) - General Subjects","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; Associazione Italiana per la Ricerca sul Cancro; Ministry of Health, British Columbia; Ministero della Salute","keywords":"Transcriptome; NODAL; Biology; Gene; Glioma; Neural stem cell; Stem cell; Computational biology; Genetics; Neuroscience; Cancer research; Gene expression","score_opus":0.016260049870113164,"score_gpt":0.23195077616583537,"score_spread":0.2156907262957222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2903504626","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98415077,0.001250604,0.0040464425,0.00009091875,0.000038863764,0.000039300547,0.007237006,0.00011702981,0.0030290291],"genre_scores_gemma":[0.9703948,0.00086968485,0.006447605,0.00020968419,0.000017416942,0.00011668547,0.0134785585,0.00008662963,0.008378957],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998977,0.0000058842156,0.0000057361785,0.000035262965,0.00002883805,0.000026588707],"domain_scores_gemma":[0.9999356,0.000010627131,0.000013884707,0.000005737682,0.000017237531,0.000016865175],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008824534,0.00018484535,0.0002446416,0.00035496845,0.0002017255,0.00036658713,0.00014024817,0.0001753569,0.002391829],"category_scores_gemma":[0.00011567653,0.000093527226,0.00026877047,0.00029963834,0.00012559665,0.00013390867,0.00026055632,0.00043306805,0.00070462556],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010225898,0.0000046905543,0.001028376,0.000033400764,0.0000050914127,0.000028552899,0.000020102085,0.000038522026,0.9969156,0.00006359652,0.00006780307,0.0016920373],"study_design_scores_gemma":[0.00002092887,0.00037119145,0.11062832,0.00004279199,0.000108905,0.0005492429,0.00043292734,0.0029701025,0.8744833,0.00030270667,0.0100706015,0.000018849181],"about_ca_topic_score_codex":0.00068598473,"about_ca_topic_score_gemma":0.0020191676,"teacher_disagreement_score":0.002391829,"about_ca_system_score_codex":0.00023935163,"about_ca_system_score_gemma":0.00026869154,"threshold_uncertainty_score":0.008001447},"labels":[],"label_agreement":null},{"id":"W2907271381","doi":"10.1128/jvi.02066-18","title":"Inhibition of Ongoing Influenza A Virus Replication Reveals Different Mechanisms of RIG-I Activation","year":2019,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Biology; Viral replication; RIG-I; Influenza A virus; RNA; Polymerase; Viral structural protein; Virology; Cell biology; Nucleoprotein; RNA silencing; Viral entry; Ribonucleoprotein; RNA polymerase; Small interfering RNA; RNA-dependent RNA polymerase; Virus; RNA interference; Gene; Genetics","score_opus":0.015279450333966313,"score_gpt":0.2697996487425608,"score_spread":0.25452019840859447,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2907271381","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9810184,0.0067292326,0.008424772,0.00011029926,0.00004884726,0.000036495283,0.00033739858,0.00008668559,0.003207725],"genre_scores_gemma":[0.9954275,0.0011428352,0.002418328,0.00004139519,0.000009492325,0.000025149531,0.00018007438,0.000008482533,0.0007467417],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99969673,0.000049528557,0.000038939528,0.00005163384,0.00008136161,0.00008170942],"domain_scores_gemma":[0.9998361,0.000042084608,0.000036476526,0.000038238304,0.000018175262,0.000028957584],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034255005,0.00034176014,0.00032172873,0.0002908527,0.000104826286,0.0005153455,0.00024824904,0.00041171795,0.00069614535],"category_scores_gemma":[0.00016312106,0.00012884742,0.00045975778,0.00013286748,0.00030034222,0.00042014424,0.0002468612,0.000823775,0.00029942245],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009834131,0.0000112170965,0.0001514184,0.00002189189,0.0000030920473,0.0000102900185,0.0000045723123,0.00006505552,0.9986437,0.00016040534,0.000004807341,0.000825241],"study_design_scores_gemma":[0.0000068876016,0.000288754,0.0035598022,0.000006993437,0.00001088697,0.00011066628,0.00001845925,0.0012136754,0.99404436,0.00010278486,0.00063177396,0.000005001446],"about_ca_topic_score_codex":0.00018166113,"about_ca_topic_score_gemma":0.00020090798,"teacher_disagreement_score":0.00069614535,"about_ca_system_score_codex":0.00039106532,"about_ca_system_score_gemma":0.00019891211,"threshold_uncertainty_score":0.0028374195},"labels":[],"label_agreement":null},{"id":"W2908079023","doi":"10.1016/j.tips.2018.12.003","title":"Therapeutic Targeting of RIG-I and MDA5 Might Not Lead to the Same Rome","year":2018,"lang":"en","type":"review","venue":"Trends in Pharmacological Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research; Université de Montréal","keywords":"MDA5; RIG-I; Vaccine adjuvant; Computational biology; RNA; Adverse effect; Virology; Medicine; Biology; Pharmacology; Immunology; RNA interference; Immune system; Genetics; Gene","score_opus":0.13634987624344042,"score_gpt":0.4226989837684221,"score_spread":0.28634910752498166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2908079023","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00036072492,0.98797834,0.0011357091,0.0042143846,0.0026779969,0.000008730154,0.000068381814,0.000047048987,0.0035087815],"genre_scores_gemma":[0.0062549682,0.98163956,0.0011120647,0.0037784243,0.0016440314,0.000028075452,0.0001461392,0.000012708974,0.0053840517],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999826,0.00003572125,0.000022890943,0.000036256315,0.00004899635,0.000030168623],"domain_scores_gemma":[0.9997042,0.00012924687,0.000040126237,0.000022748967,0.00006795837,0.000035648394],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007172577,0.00075619714,0.0014821324,0.0005350745,0.0002027587,0.0012532515,0.0009132943,0.0017845996,0.0057029724],"category_scores_gemma":[0.0006820562,0.00014908222,0.00050218066,0.0003774187,0.00071709737,0.0016531802,0.0005300162,0.003438867,0.0029623315],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029734612,0.000093017305,0.00021055299,0.0084085725,0.00016003978,0.00029354522,0.000042847063,0.0002816594,0.010226514,0.028089192,0.07269825,0.87919843],"study_design_scores_gemma":[0.000040814844,0.00011210321,0.00033356075,0.0017703758,0.00008575045,0.0010065143,0.000043568707,0.00008969967,0.0016734005,0.0068677044,0.9879574,0.000019210962],"about_ca_topic_score_codex":0.00026523435,"about_ca_topic_score_gemma":0.0006865619,"teacher_disagreement_score":0.0057029724,"about_ca_system_score_codex":0.00048254582,"about_ca_system_score_gemma":0.00085582153,"threshold_uncertainty_score":0.019078314},"labels":[],"label_agreement":null},{"id":"W2908095133","doi":"10.1016/j.cyto.2018.12.008","title":"Decoding the enigma of antiviral crisis: Does one target molecule regulate all?","year":2019,"lang":"en","type":"review","venue":"Cytokine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"University of Oxford; Duke-NUS Medical School","keywords":"Cytokine storm; Immunology; Immune system; Cytokine; Receptor; Signal transduction; Mechanism (biology); Tumor necrosis factor alpha; Biology; Disease; Cell biology; Medicine; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty); Genetics","score_opus":0.04476771681547158,"score_gpt":0.3123590528121305,"score_spread":0.2675913359966589,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2908095133","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000031378782,0.9961133,0.00013151477,0.0019212259,0.001231915,0.0000014581659,0.000007732043,0.0000064654246,0.00055499707],"genre_scores_gemma":[0.0005845394,0.99408,0.00018242055,0.0018610641,0.0025124103,0.000005415881,0.000018815188,0.0000024164212,0.00075281685],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999762,0.000063490086,0.000026124704,0.00003842812,0.00007550205,0.000034476223],"domain_scores_gemma":[0.99921584,0.0004320555,0.000062587664,0.000023579341,0.00015820212,0.00010777536],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001223936,0.001053197,0.0016291421,0.0013346354,0.00046848613,0.001926974,0.0011497402,0.0025316132,0.0029499582],"category_scores_gemma":[0.0017071196,0.00026108127,0.0002892044,0.0012126565,0.0014959773,0.003557771,0.0012710323,0.0047003813,0.0022641206],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016854286,0.00006665208,0.00021165349,0.007597507,0.00005770116,0.00022189728,0.00009501807,0.00033920293,0.0016176457,0.017464485,0.17582044,0.7963392],"study_design_scores_gemma":[0.000016845397,0.00004777792,0.00026288585,0.00239494,0.000035799163,0.00049678335,0.00010336214,0.000101375015,0.00019154101,0.008439793,0.9878927,0.000016193031],"about_ca_topic_score_codex":0.00092022464,"about_ca_topic_score_gemma":0.0020589936,"teacher_disagreement_score":0.0029499582,"about_ca_system_score_codex":0.0010594759,"about_ca_system_score_gemma":0.0018811999,"threshold_uncertainty_score":0.009868562},"labels":[],"label_agreement":null},{"id":"W2909575449","doi":"10.1002/path.5232","title":"The immunological consequences of radiation‐induced DNA damage","year":2019,"lang":"en","type":"review","venue":"The Journal of Pathology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Cancer Research; Cancer Research UK; National Institute for Health and Care Research; NIHR Biomedical Research Centre, Royal Marsden NHS Foundation Trust/Institute of Cancer Research; Royal Marsden NHS Foundation Trust","keywords":"Immune system; DNA damage; Cancer research; Biology; Stromal cell; Genome instability; Stimulator of interferon genes; Abscopal effect; Context (archaeology); Radiation therapy; Tumor microenvironment; DNA repair; Immunosuppression; Interferon; Immunology; Programmed cell death; Immunotherapy; Innate immune system; Apoptosis; Medicine; DNA; Genetics","score_opus":0.06573877676198982,"score_gpt":0.33929898044064927,"score_spread":0.27356020367865946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2909575449","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.701823,0.26173484,0.0091375355,0.002008714,0.00088296895,0.00014940384,0.0005267375,0.00017822205,0.023558654],"genre_scores_gemma":[0.95348877,0.038285468,0.0012679243,0.0007379082,0.0003450418,0.000062720275,0.00037631052,0.000024361503,0.005411515],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99955934,0.00015940511,0.000029262561,0.00005360566,0.00012294376,0.00007532817],"domain_scores_gemma":[0.99971,0.00006916577,0.00008104718,0.000033994085,0.00005824475,0.00004753118],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00078725547,0.00027260857,0.000249061,0.00052627514,0.00017773463,0.00042020812,0.00023778374,0.00050457177,0.0028350896],"category_scores_gemma":[0.00055899785,0.0001189496,0.0002530707,0.0001907024,0.00037090882,0.00030074993,0.00035635434,0.00065787026,0.0007803333],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00062865997,0.00015989275,0.0043022158,0.0014066859,0.00008519086,0.0008146209,0.000189079,0.00058691285,0.91696364,0.0035987897,0.0014787965,0.06978555],"study_design_scores_gemma":[0.0001810495,0.008935828,0.11688136,0.0007730582,0.00034860717,0.02088254,0.001034935,0.0016284528,0.6516273,0.008447307,0.18918903,0.00007049843],"about_ca_topic_score_codex":0.00010122043,"about_ca_topic_score_gemma":0.000108083565,"teacher_disagreement_score":0.0028350896,"about_ca_system_score_codex":0.00031461517,"about_ca_system_score_gemma":0.00015016294,"threshold_uncertainty_score":0.009484351},"labels":[],"label_agreement":null},{"id":"W2909799277","doi":"10.1016/j.cell.2018.12.012","title":"Environmental Control of Astrocyte Pathogenic Activities in CNS Inflammation","year":2019,"lang":"en","type":"article","venue":"Cell","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":258,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"National Institute of Neurological Disorders and Stroke; National Institute of Allergy and Infectious Diseases; National Cancer Institute; National Institutes of Health; Vetenskapsrådet; Multiple Sclerosis Society; Dana-Farber Cancer Institute; National Multiple Sclerosis Society; European Molecular Biology Organization; National Institute of Environmental Health Sciences; American Cancer Society","keywords":"Biology; Astrocyte; Zebrafish; Inflammation; Experimental autoimmune encephalomyelitis; Neurodegeneration; CRISPR; Computational biology; Immunology; Bioinformatics; Genetics; Neuroscience; Gene; Central nervous system; Disease; Medicine","score_opus":0.0035013485769633417,"score_gpt":0.1796480553752617,"score_spread":0.17614670679829836,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2909799277","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9762481,0.009702968,0.0032580753,0.00083163724,0.000115103525,0.00001429872,0.00023326155,0.000047179637,0.0095493365],"genre_scores_gemma":[0.99504554,0.0023891728,0.0005779342,0.000060098224,0.00005386138,0.000008508359,0.00006284536,0.000007769931,0.0017941727],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999796,0.000041472704,0.00000881719,0.000020537644,0.00003910167,0.0000941605],"domain_scores_gemma":[0.9998964,0.0000150374635,0.000028018494,0.000009283133,0.000021244197,0.000030055186],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018355637,0.00027216706,0.00019603173,0.00027618188,0.00035645408,0.0007067672,0.00019365786,0.00034203037,0.0013697598],"category_scores_gemma":[0.00014783663,0.000083528925,0.00012912982,0.00017022215,0.00037660572,0.000362137,0.00033986755,0.00036115668,0.00022121698],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00089195126,0.0000724591,0.0056872554,0.00017124959,0.00001958039,0.0011914939,0.00023344823,0.000419766,0.9702159,0.006011784,0.00043200364,0.014653118],"study_design_scores_gemma":[0.00006546351,0.000703748,0.16249765,0.0001798341,0.000087130684,0.0021105544,0.0027732295,0.0033879206,0.79285157,0.011392654,0.023907902,0.00004238966],"about_ca_topic_score_codex":0.000559106,"about_ca_topic_score_gemma":0.0016987297,"teacher_disagreement_score":0.0013697598,"about_ca_system_score_codex":0.00040757796,"about_ca_system_score_gemma":0.00030494863,"threshold_uncertainty_score":0.0045823455},"labels":[],"label_agreement":null},{"id":"W2909850450","doi":"10.1089/cbr.2018.2566","title":"Lentivirus-Based Virus-Like Particles Mediate Delivery of Caspase 8 into Breast Cancer Cells and Inhibit Tumor Growth","year":2019,"lang":"en","type":"article","venue":"Cancer Biotherapy and Radiopharmaceuticals","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"National Natural Science Foundation of China","keywords":"Apoptosis; Carcinogenesis; Cancer research; Cancer cell; Cancer; Programmed cell death; Breast cancer; Vesicular stomatitis virus; Cell growth; Biology; Caspase; Virus; Chemistry; Immunology; Biochemistry","score_opus":0.012012221459266203,"score_gpt":0.2864272114355402,"score_spread":0.27441498997627395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2909850450","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97528344,0.0039651776,0.015825903,0.00030952523,0.00014836928,0.00015593397,0.00042732977,0.00030134092,0.0035829702],"genre_scores_gemma":[0.98492223,0.0012520314,0.009451334,0.00009258206,0.000024447538,0.00009482223,0.00045586328,0.000027951188,0.0036788003],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998647,0.00002026356,0.0000122701385,0.000022547372,0.00005236435,0.00002781522],"domain_scores_gemma":[0.9999317,0.000018581986,0.000020677993,0.000008040266,0.000010752583,0.0000102992335],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020365286,0.00030222908,0.00017213146,0.00019730181,0.000112820286,0.00028752792,0.00026510542,0.00045032435,0.0008893382],"category_scores_gemma":[0.00016799294,0.00009583373,0.00024252426,0.000091397815,0.00024369919,0.00024593674,0.00013513186,0.00074199255,0.00025451794],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008717713,0.000064939806,0.00014676325,0.00005147185,0.000008480783,0.000046302514,0.000018825545,0.00013557533,0.99590576,0.00044216038,0.00011761042,0.0029750783],"study_design_scores_gemma":[0.00004045631,0.0003103185,0.00041078147,0.0000063512857,0.000014615475,0.0001233012,0.000008522432,0.0010862548,0.995,0.00007096052,0.0029261592,0.0000023705177],"about_ca_topic_score_codex":0.0003442363,"about_ca_topic_score_gemma":0.00030947695,"teacher_disagreement_score":0.0008893382,"about_ca_system_score_codex":0.0004523092,"about_ca_system_score_gemma":0.00027028506,"threshold_uncertainty_score":0.0032817721},"labels":[],"label_agreement":null},{"id":"W2910060832","doi":"10.1042/bcj20180754","title":"MOV10 sequesters the RNP of influenza A virus in the cytoplasm and is antagonized by viral NS1 protein","year":2019,"lang":"en","type":"article","venue":"Biochemical Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Virology; Biology; Nucleoprotein; Virus; Vesicular stomatitis virus; Influenza A virus; Viral replication; Sendai virus","score_opus":0.007824458833641183,"score_gpt":0.2436066427351502,"score_spread":0.235782183901509,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2910060832","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99410963,0.0023525725,0.0013824851,0.000072732604,0.000027289012,0.0000097327675,0.00012393526,0.00004797956,0.0018736694],"genre_scores_gemma":[0.99587554,0.00058022316,0.0008220075,0.000037681435,0.000009338406,0.000010811129,0.00030207206,0.00001062504,0.0023516559],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999045,0.000019945517,0.0000057180187,0.000016629447,0.000023643255,0.000029561766],"domain_scores_gemma":[0.9999386,0.000011531672,0.000016396501,0.000005460106,0.0000071981967,0.000020747548],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009899495,0.00039296862,0.00017525343,0.00013146007,0.00013852144,0.00017085552,0.00018515636,0.0002015446,0.0016328007],"category_scores_gemma":[0.0000831872,0.00009318822,0.00023007547,0.000043932756,0.00020767727,0.00014138452,0.00019122187,0.0002447914,0.00047628925],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005977259,0.0000074398786,0.00016029386,0.000023353856,0.0000035337214,0.000044102046,0.0000030863725,0.000018467621,0.99908566,0.00005294265,0.000022920023,0.0005183951],"study_design_scores_gemma":[0.000010271132,0.0002554959,0.005479735,0.0000069370353,0.0000074941745,0.00048098713,0.000020091918,0.0005046991,0.99087465,0.000048230428,0.0023084795,0.000003003062],"about_ca_topic_score_codex":0.00044696723,"about_ca_topic_score_gemma":0.00064070465,"teacher_disagreement_score":0.0016328007,"about_ca_system_score_codex":0.00025057347,"about_ca_system_score_gemma":0.00013099407,"threshold_uncertainty_score":0.005462289},"labels":[],"label_agreement":null},{"id":"W2910890751","doi":"10.3390/vetsci6010005","title":"Innate Immune Responses to Avian Influenza Viruses in Ducks and Chickens","year":2019,"lang":"en","type":"review","venue":"Veterinary Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Influenza A virus subtype H5N1; Biology; Innate immune system; Virology; Interferon; Immune system; Viral replication; Virus; Influenza A virus; Immunology; Microbiology","score_opus":0.16886957544974548,"score_gpt":0.4074738590285049,"score_spread":0.23860428357875943,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2910890751","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016778009,0.9983329,0.00008229073,0.00019000014,0.00022743897,0.0000031734994,0.00001702891,0.000005644834,0.00097364053],"genre_scores_gemma":[0.0008125567,0.99777585,0.00011833205,0.00013509317,0.00016919889,0.0000054008883,0.00003530134,0.0000011197483,0.0009472109],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99992,0.000010759802,0.000013959639,0.0000185568,0.00002647488,0.0000101990845],"domain_scores_gemma":[0.9998665,0.00004468166,0.000024317427,0.000004050451,0.000038884573,0.000021577811],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002952635,0.0006172871,0.00064802606,0.0013130729,0.00018330276,0.00063419313,0.0004158611,0.00083302194,0.002269486],"category_scores_gemma":[0.0003148186,0.00018039727,0.0002228139,0.0009525656,0.00029144034,0.00075306103,0.0004488807,0.0010098914,0.0016756416],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007922718,0.00003927581,0.00023947796,0.010779388,0.0000328326,0.0001552473,0.0000633014,0.00023004228,0.0039358563,0.0019377442,0.021638922,0.9608687],"study_design_scores_gemma":[0.0000073797146,0.000105369494,0.0016468074,0.002315144,0.000043008706,0.0009936271,0.000054085995,0.00005204158,0.00062153506,0.00074346445,0.9934041,0.000013403779],"about_ca_topic_score_codex":0.0010907162,"about_ca_topic_score_gemma":0.0015317533,"teacher_disagreement_score":0.002269486,"about_ca_system_score_codex":0.0004667068,"about_ca_system_score_gemma":0.0006023785,"threshold_uncertainty_score":0.0075921416},"labels":[],"label_agreement":null},{"id":"W2912081141","doi":"10.1128/jvi.02299-18","title":"Cytoplasm and Beyond: Dynamic Innate Immune Sensing of Influenza A Virus by RIG-I","year":2019,"lang":"en","type":"review","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada; Public Health Agency of Canada","keywords":"Biology; Innate immune system; RIG-I; Cytoplasm; Influenza A virus; Virology; Cell biology; Virus; Viral replication; MDA5; Immune system; RNA; Gene; Genetics; RNA interference","score_opus":0.019302611389657266,"score_gpt":0.3142853340781944,"score_spread":0.29498272268853715,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912081141","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006282949,0.997769,0.00011459796,0.00029681987,0.00056434155,0.0000028644777,0.000010897936,0.0000071639643,0.0011714335],"genre_scores_gemma":[0.00039243305,0.9975891,0.0001296124,0.00026795114,0.000454822,0.000004965348,0.000026261581,0.0000020910231,0.0011327101],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99985456,0.000024931767,0.000024043555,0.000025451694,0.000053272193,0.000017654453],"domain_scores_gemma":[0.99979824,0.00007211935,0.00003122236,0.000009809254,0.00005238894,0.00003618422],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050711905,0.0011059712,0.001375722,0.002318693,0.00032484162,0.0013799059,0.0011208752,0.0016057639,0.0032081918],"category_scores_gemma":[0.0004616928,0.00041430484,0.00038335173,0.0022118157,0.0008710394,0.0028034798,0.0011359775,0.0024674796,0.0048631737],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001005038,0.000049807633,0.00010219357,0.010863033,0.000049522598,0.0002921606,0.000083485305,0.00034441255,0.003536481,0.008475401,0.060169786,0.9159333],"study_design_scores_gemma":[0.0000075961093,0.000032557073,0.00027090913,0.0011523392,0.000018036433,0.0006553013,0.00002690367,0.000038594186,0.00026061005,0.0017327241,0.99579453,0.000009870462],"about_ca_topic_score_codex":0.0007248638,"about_ca_topic_score_gemma":0.0012512107,"teacher_disagreement_score":0.0032081918,"about_ca_system_score_codex":0.0008878523,"about_ca_system_score_gemma":0.0008928069,"threshold_uncertainty_score":0.010732472},"labels":[],"label_agreement":null},{"id":"W2912834287","doi":"10.1002/glia.23592","title":"Chronic neurodegeneration induces type I interferon synthesis via STING, shaping microglial phenotype and accelerating disease progression","year":2019,"lang":"en","type":"article","venue":"Glia","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":137,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"National Institute on Aging; National Institutes of Health; Wellcome Trust; Eli Lilly and Company","keywords":"Neurodegeneration; Sting; Biology; Phenotype; Disease; Neuroscience; Interferon type I; Microglia; Interferon; Stimulator of interferon genes; Immunology; Inflammation; Innate immune system; Pathology; Medicine; Gene; Genetics; Immune system","score_opus":0.025642495750284346,"score_gpt":0.2688012017935724,"score_spread":0.24315870604328807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912834287","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996151,0.0015045538,0.0013930403,0.0000420192,0.000020724383,0.000020089139,0.0002125383,0.000057232064,0.00059874845],"genre_scores_gemma":[0.9966967,0.0007321816,0.001274562,0.00003462183,0.000013689,0.000026013528,0.00018219376,0.0000078499415,0.0010321827],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999074,0.0000141369765,0.000014917618,0.000017484477,0.000017653214,0.000028407563],"domain_scores_gemma":[0.9998772,0.0000065256154,0.000050116556,0.000013046395,0.000015353191,0.000037747723],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015512164,0.0004449087,0.00021917379,0.00028176478,0.00012307178,0.00023907133,0.000112528905,0.0002980917,0.00083844026],"category_scores_gemma":[0.00006973351,0.000115277355,0.00026821907,0.000097468976,0.00022509138,0.00021349269,0.00015699703,0.0005556271,0.00027862538],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013002886,0.000016157346,0.00055880647,0.00001962616,0.0000028463382,0.000051193627,0.000011287158,0.000012855632,0.998676,0.000027179654,0.000013125111,0.0004808451],"study_design_scores_gemma":[0.00005023327,0.0015732354,0.050761953,0.000045116503,0.000067485846,0.0011057176,0.00013977446,0.0013188482,0.9424347,0.0003500798,0.0021424207,0.000010276138],"about_ca_topic_score_codex":0.0002651423,"about_ca_topic_score_gemma":0.00045158563,"teacher_disagreement_score":0.00083844026,"about_ca_system_score_codex":0.00020998478,"about_ca_system_score_gemma":0.00011098234,"threshold_uncertainty_score":0.0028048158},"labels":[],"label_agreement":null},{"id":"W2913113876","doi":"10.3791/59095","title":"Confocal Imaging of Double-Stranded RNA and Pattern Recognition Receptors in Negative-Sense RNA Virus Infection","year":2019,"lang":"en","type":"article","venue":"Journal of Visualized Experiments","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases","keywords":"RNA silencing; Biology; Virology; RNA; Arenavirus; Pattern recognition receptor; RNA virus; Virus; Sense (electronics); Innate immune system; MDA5; Immune system; RNA interference; Gene; Immunology; Genetics; CD8; Chemistry","score_opus":0.028005129807765955,"score_gpt":0.3691187727079161,"score_spread":0.3411136429001501,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2913113876","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7736819,0.0033778916,0.20521677,0.0004928567,0.00014184957,0.00045251238,0.0011419209,0.0011506428,0.01434366],"genre_scores_gemma":[0.6237448,0.002942733,0.3623251,0.00027770526,0.000042323576,0.0010153417,0.001074628,0.00018446872,0.008392958],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99969554,0.000037323334,0.00001864069,0.00009418984,0.00008741795,0.00006686191],"domain_scores_gemma":[0.99986255,0.000031628006,0.000023415341,0.000022766377,0.00003612562,0.000023518243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039780937,0.0004265611,0.00031019739,0.00047720864,0.00033710222,0.00027922186,0.0007356864,0.0009672306,0.0011607656],"category_scores_gemma":[0.00017588655,0.0003843122,0.00033841035,0.0003102305,0.0003535953,0.00043121327,0.00049867586,0.0008509832,0.0006441446],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002290306,0.00001350264,0.00006867744,0.00004636735,0.000002403854,0.000077947036,0.000024960837,0.00014381378,0.9981281,0.0004095336,0.000082428094,0.0009794069],"study_design_scores_gemma":[0.000018842891,0.000116285984,0.0025802422,0.000019993813,0.000010039743,0.0007234412,0.00003786131,0.011153313,0.9794001,0.00022207151,0.0056941947,0.000023622948],"about_ca_topic_score_codex":0.0011220542,"about_ca_topic_score_gemma":0.0014475507,"teacher_disagreement_score":0.0011607656,"about_ca_system_score_codex":0.00056076795,"about_ca_system_score_gemma":0.0004599131,"threshold_uncertainty_score":0.0040687323},"labels":[],"label_agreement":null},{"id":"W2914838081","doi":"10.3389/fimmu.2019.00104","title":"The Evolving Role of TRAFs in Mediating Inflammatory Responses","year":2019,"lang":"en","type":"review","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":109,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Banting Research Foundation","keywords":"Inflammation; Biology; Medicine; Immunology","score_opus":0.014544498623715018,"score_gpt":0.26995364385794346,"score_spread":0.2554091452342284,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2914838081","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012897348,0.99823666,0.00013524866,0.00027136717,0.00026462052,0.0000019177262,0.000008873365,0.000006297014,0.0009460911],"genre_scores_gemma":[0.0007843202,0.9981085,0.0001249704,0.00016590088,0.0003045573,0.0000031382274,0.000016367912,0.0000010001226,0.00049120694],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998184,0.000034224577,0.000022826156,0.00003313969,0.00006502536,0.000026267733],"domain_scores_gemma":[0.99984026,0.000055762423,0.000023238941,0.000006121942,0.000049510214,0.00002516316],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005530429,0.00078435836,0.0009778072,0.0012671123,0.00032925437,0.0011823733,0.00073089503,0.0010648465,0.0022588638],"category_scores_gemma":[0.00039441674,0.00020818638,0.0003112158,0.0012798298,0.0006209725,0.0017700132,0.00088570407,0.0019466747,0.0023460935],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010433082,0.000044046374,0.00016903439,0.01382089,0.000048131813,0.00030636034,0.00012907461,0.00035535762,0.0078031495,0.013506679,0.025739105,0.93797386],"study_design_scores_gemma":[0.000008886289,0.00005492048,0.00041699,0.0013345073,0.000030183186,0.000945139,0.000056002144,0.00005392761,0.0008018437,0.0032215423,0.9930629,0.000013239635],"about_ca_topic_score_codex":0.0005307523,"about_ca_topic_score_gemma":0.00061891304,"teacher_disagreement_score":0.0022588638,"about_ca_system_score_codex":0.00072376657,"about_ca_system_score_gemma":0.00090561307,"threshold_uncertainty_score":0.007556677},"labels":[],"label_agreement":null},{"id":"W2915405957","doi":"10.1073/pnas.1815071116","title":"OAS-RNase L innate immune pathway mediates the cytotoxicity of a DNA-demethylating drug","year":2019,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Canadian Cancer Society; Division of Intramural Research, National Institute of Allergy and Infectious Diseases","keywords":"Azacitidine; Myeloid leukemia; Innate immune system; Biology; Drug; Cytotoxicity; Cancer research; Immune system; Pharmacology; DNA methylation; Immunology; Biochemistry; Gene; In vitro; Gene expression","score_opus":0.02163603697445259,"score_gpt":0.27182798068925246,"score_spread":0.25019194371479986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2915405957","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99224985,0.001513145,0.0031354814,0.00016177353,0.00004875589,0.000027119535,0.000389356,0.00006626217,0.002408392],"genre_scores_gemma":[0.99540687,0.0004046361,0.0012594543,0.000041384814,0.0000093699,0.00002270096,0.0005318314,0.000006262783,0.0023174863],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998555,0.00002851591,0.000013438487,0.00003166068,0.00003478094,0.00003598755],"domain_scores_gemma":[0.9998945,0.000017224203,0.000031755048,0.000014460946,0.000012556605,0.000029591001],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018323182,0.00037030433,0.00026487577,0.00017728763,0.00015867494,0.00027096338,0.00012447247,0.0002291728,0.002200114],"category_scores_gemma":[0.00012258302,0.00009827608,0.00034092902,0.000099420475,0.0002688299,0.00021252391,0.00015855228,0.0006746591,0.0004921854],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007919552,0.000017104887,0.000153881,0.000020105508,0.0000042627603,0.000015830512,0.0000043688997,0.000038092323,0.9990262,0.000060156166,0.000021877584,0.00055893796],"study_design_scores_gemma":[0.000011850568,0.00020547745,0.0028171656,0.0000041128365,0.000006687237,0.00011074334,0.000016039981,0.0006171127,0.99518245,0.000033944303,0.000992569,0.0000018522879],"about_ca_topic_score_codex":0.0003759219,"about_ca_topic_score_gemma":0.0006290163,"teacher_disagreement_score":0.002200114,"about_ca_system_score_codex":0.00040501627,"about_ca_system_score_gemma":0.00027979372,"threshold_uncertainty_score":0.0073601604},"labels":[],"label_agreement":null},{"id":"W2917853350","doi":"10.1016/bs.ctm.2019.01.006","title":"Ubiquitous and cell type-specific transcriptomic changes triggered by dissipation of monovalent cation gradients in rodent cells: Physiological and pathophysiological implications","year":2019,"lang":"en","type":"article","venue":"Current topics in membranes","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Ministry of Education, India; Russian Foundation for Basic Research; Ministry of Earth Sciences","keywords":"Transcriptome; Rodent; Pathophysiology; Biology; Cell biology; Neuroscience; Chemistry; Gene expression; Ecology; Gene; Biochemistry; Endocrinology","score_opus":0.027964128442902428,"score_gpt":0.26556268589220455,"score_spread":0.23759855744930214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2917853350","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99450725,0.0017962803,0.0020149928,0.000077074284,0.00003370612,0.00001610851,0.00095651986,0.000046708126,0.0005513594],"genre_scores_gemma":[0.99534494,0.0010513202,0.0011654278,0.00008013134,0.000018597995,0.000036258247,0.0009714354,0.000019968918,0.0013118612],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99985445,0.000011603695,0.000010059002,0.00005721237,0.000019524277,0.000047129073],"domain_scores_gemma":[0.99983513,0.000020589203,0.00006588953,0.00002072699,0.000020470829,0.00003708379],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000119583405,0.00021366701,0.00030588006,0.0003066787,0.00014200549,0.00034612094,0.00018253397,0.00034776377,0.0010256642],"category_scores_gemma":[0.00014515177,0.00016083587,0.00026550255,0.00022347347,0.00032208872,0.00037805934,0.00023502173,0.00038806663,0.00022189021],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023472062,0.0000069489192,0.0009842566,0.00002404041,0.000005753598,0.000051798088,0.000019955416,0.0000118954185,0.9980585,0.000039826442,0.000013627737,0.000548661],"study_design_scores_gemma":[0.00003765477,0.000804787,0.23941134,0.000017966251,0.000114183524,0.0011023727,0.00054962654,0.00044782486,0.7548079,0.00034412436,0.0023320222,0.000030302574],"about_ca_topic_score_codex":0.00028325344,"about_ca_topic_score_gemma":0.0004096817,"teacher_disagreement_score":0.0010256642,"about_ca_system_score_codex":0.00014973771,"about_ca_system_score_gemma":0.00014764983,"threshold_uncertainty_score":0.003431201},"labels":[],"label_agreement":null},{"id":"W2921152974","doi":"10.3389/fimmu.2019.00311","title":"Characterization and Transcript Expression Analyses of Atlantic Cod Viperin","year":2019,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada; Memorial University of Newfoundland","keywords":"Atlantic cod; Computational biology; Biology; Fishery; Fish <Actinopterygii>","score_opus":0.011130439322988982,"score_gpt":0.24354105492626343,"score_spread":0.23241061560327445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2921152974","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99292165,0.00089129043,0.00261035,0.000043098324,0.000014944081,0.000029673693,0.0023816847,0.000022426922,0.0010849492],"genre_scores_gemma":[0.97114974,0.0012017462,0.011851448,0.00016583044,0.000027027065,0.00013284716,0.009434081,0.000058133734,0.0059791575],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993193,0.000002296219,0.0000057034813,0.000027012928,0.00001979354,0.000013243399],"domain_scores_gemma":[0.9999062,0.000017187547,0.000028129129,0.000007559799,0.00002024883,0.000020634365],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000067465066,0.00020898129,0.00020657112,0.000300236,0.00019093201,0.00027399478,0.00009261267,0.0002053426,0.00082810124],"category_scores_gemma":[0.0001188198,0.00012178331,0.0002798946,0.00022803832,0.00017069447,0.000092279355,0.00017201266,0.00035220064,0.000322621],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006156958,0.000005659577,0.002032247,0.000036659945,0.0000047474464,0.000071767936,0.00004005099,0.000041640917,0.9966216,0.000023118428,0.00001563482,0.001045366],"study_design_scores_gemma":[0.0000361404,0.00083766074,0.43865025,0.000052128355,0.00014994257,0.0013888353,0.000682129,0.0028536783,0.54469776,0.00018050807,0.010434296,0.000036633497],"about_ca_topic_score_codex":0.0017435298,"about_ca_topic_score_gemma":0.002979038,"teacher_disagreement_score":0.0017435298,"about_ca_system_score_codex":0.00015170097,"about_ca_system_score_gemma":0.0002538169,"threshold_uncertainty_score":0.003466785},"labels":[],"label_agreement":null},{"id":"W2921197313","doi":"10.4049/jimmunol.1801645","title":"FTRCA1, a Species-Specific Member of finTRIM Family, Negatively Regulates Fish IFN Response through Autophage-Lysosomal Degradation of TBK1","year":2019,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"","keywords":"IRF3; Biology; TANK-binding kinase 1; Ubiquitin ligase; Phosphorylation; Innate immune system; Cell biology; Gene knockdown; IRF7; Transfection; Ubiquitin; Gene; Immune system; Genetics; Protein kinase A; MAP kinase kinase kinase","score_opus":0.02339828759447177,"score_gpt":0.2476011304870488,"score_spread":0.22420284289257703,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2921197313","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99479693,0.0018137435,0.0015953493,0.00008229948,0.000029684461,0.000012703389,0.0005378241,0.00010842954,0.0010230431],"genre_scores_gemma":[0.9947837,0.00039590194,0.0012420282,0.00005678315,0.000008458248,0.000021810833,0.0010223477,0.00001676758,0.0024521935],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999895,0.000008406803,0.000008123503,0.000035099274,0.000020512292,0.00003289363],"domain_scores_gemma":[0.99991226,0.0000064643423,0.00003119836,0.000008905347,0.000010271745,0.00003088044],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008841532,0.000309223,0.00021739326,0.00024409687,0.00028588294,0.00020013079,0.00016277707,0.00025823258,0.001363363],"category_scores_gemma":[0.00008387286,0.0001107316,0.0003520771,0.0001001908,0.00017487968,0.00012348109,0.00019972322,0.00029958176,0.00055301125],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000085295695,0.0000061189453,0.00058720907,0.000029305047,0.0000035241712,0.000072518866,0.000008575003,0.000023870685,0.9986002,0.000035792338,0.000052199368,0.0004953131],"study_design_scores_gemma":[0.000021808932,0.00014302778,0.040650953,0.000015246418,0.000029800636,0.0011984628,0.00007910436,0.0016793645,0.9512153,0.000073584306,0.0048840144,0.000009347168],"about_ca_topic_score_codex":0.0007411184,"about_ca_topic_score_gemma":0.0012605649,"teacher_disagreement_score":0.001363363,"about_ca_system_score_codex":0.00039789866,"about_ca_system_score_gemma":0.0002011518,"threshold_uncertainty_score":0.004560888},"labels":[],"label_agreement":null},{"id":"W2924224681","doi":"10.1016/j.dci.2019.03.015","title":"Full characterization and transcript expression profiling of the interferon regulatory factor (IRF) gene family in Atlantic cod (Gadus morhua)","year":2019,"lang":"en","type":"article","venue":"Developmental & Comparative Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada; Norges Forskningsråd","keywords":"Biology; Atlantic cod; Interferon regulatory factors; Gadus; IRF7; IRF3; IRF5; IRF8; Genetics; Gene; Rapid amplification of cDNA ends; Complementary DNA; Gene expression profiling; Interferon; Gene family; Transcription factor; Gene expression; Fishery","score_opus":0.021554726051900393,"score_gpt":0.2386425992557817,"score_spread":0.21708787320388132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2924224681","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99156404,0.00090948376,0.002434708,0.000090685724,0.000028095565,0.000019528996,0.0033490998,0.000036381567,0.0015680001],"genre_scores_gemma":[0.9741978,0.000739307,0.0052772798,0.00026542824,0.000027955075,0.00005591434,0.010581692,0.00008772308,0.008766884],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991405,0.0000031073746,0.0000046742557,0.000030307976,0.00001973743,0.00002805043],"domain_scores_gemma":[0.9999033,0.000016843365,0.000021424365,0.000013585906,0.00002291366,0.000021952892],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000876158,0.00019428798,0.00021519058,0.00037347578,0.0003177053,0.00026905377,0.00015410938,0.0001817136,0.00092971884],"category_scores_gemma":[0.000112974776,0.00014870528,0.00031890487,0.00024203454,0.00018785456,0.00017809327,0.0002008019,0.00043289718,0.00048587454],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008570002,0.000008888962,0.001636108,0.00001735134,0.000003254095,0.000037600512,0.000028561726,0.000021327904,0.9968454,0.000050507686,0.000030666964,0.0012346064],"study_design_scores_gemma":[0.000034718516,0.00045172335,0.518126,0.000034240413,0.00011331316,0.001310436,0.00067356374,0.0018488801,0.46599278,0.00030009728,0.011083456,0.000030833908],"about_ca_topic_score_codex":0.0023368818,"about_ca_topic_score_gemma":0.0047328817,"teacher_disagreement_score":0.0023368818,"about_ca_system_score_codex":0.00022168108,"about_ca_system_score_gemma":0.0003155527,"threshold_uncertainty_score":0.0046465397},"labels":[],"label_agreement":null},{"id":"W2927523158","doi":"10.1016/j.cytogfr.2019.04.003","title":"An emerging role for calcium signalling in innate and autoimmunity via the cGAS-STING axis","year":2019,"lang":"en","type":"review","venue":"Cytokine & Growth Factor Reviews","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Killam Trusts","keywords":"Sting; Innate immune system; Autoimmunity; Cell biology; Calcium signaling; Biology; Immunology; Effector; Autophagy; Signal transduction; Immune system; Apoptosis","score_opus":0.0972573541222133,"score_gpt":0.36252235637015906,"score_spread":0.26526500224794575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2927523158","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015991343,0.997207,0.00019963516,0.0006496974,0.0008160334,0.0000020142265,0.000013225384,0.000011019954,0.00094143144],"genre_scores_gemma":[0.0014069255,0.9957283,0.00021215981,0.0004128564,0.0011103282,0.000004667469,0.000029487694,0.000002319493,0.0010928584],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998548,0.000021983336,0.000017180371,0.000027311053,0.000052027335,0.00002662593],"domain_scores_gemma":[0.99977297,0.00009655058,0.000031036267,0.0000067809324,0.00005014513,0.00004253283],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005885889,0.0008109794,0.0011327362,0.00081641204,0.00020813338,0.0011898663,0.000870158,0.001378612,0.0031820978],"category_scores_gemma":[0.00046722827,0.00017954971,0.00030914252,0.0008594364,0.0006058967,0.0013230533,0.0009441584,0.0023077829,0.0016873514],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002916969,0.00006550096,0.00020730519,0.009293676,0.00008635514,0.00048085352,0.00006103893,0.0004178495,0.012040809,0.010865285,0.063323066,0.90286666],"study_design_scores_gemma":[0.000038884227,0.00009211768,0.00058749923,0.00092801533,0.000059229085,0.00063199294,0.000049051898,0.00011972925,0.00088700425,0.003339809,0.99325246,0.000014188028],"about_ca_topic_score_codex":0.00042171218,"about_ca_topic_score_gemma":0.0010039127,"teacher_disagreement_score":0.0031820978,"about_ca_system_score_codex":0.00061290676,"about_ca_system_score_gemma":0.0010200256,"threshold_uncertainty_score":0.010645151},"labels":[],"label_agreement":null},{"id":"W2938183360","doi":"10.1007/s12250-019-00112-5","title":"Molecular Characterization and Expression Analysis of ftr01, ftr42, and ftr58 in Zebrafish (Danio rerio)","year":2019,"lang":"en","type":"article","venue":"Virologica Sinica","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Fundamental Research Funds for the Central Universities; National Key Research and Development Program of China; Huazhong Agricultural University; National Natural Science Foundation of China","keywords":"Zebrafish; Danio; Biology; Innate immune system; Viremia; Gene; Genetics; Cell biology; Molecular biology; Virus; Immune system","score_opus":0.006457570946615932,"score_gpt":0.2241042000762405,"score_spread":0.21764662912962457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2938183360","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98477364,0.0016520462,0.007889353,0.00021787791,0.000049217047,0.000052874246,0.0019572617,0.00012013225,0.0032876143],"genre_scores_gemma":[0.95650834,0.0016267889,0.013810935,0.00022100128,0.000023238405,0.00015311802,0.005100207,0.00012598209,0.02243042],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989796,0.0000035524752,0.000009185535,0.00003077669,0.00002720855,0.000031336032],"domain_scores_gemma":[0.9999099,0.000009527052,0.000032268723,0.000011126765,0.000016118405,0.000021034979],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012820425,0.0003521288,0.00018965756,0.00049254444,0.0003647778,0.00024966706,0.00026464756,0.00032326696,0.0017962509],"category_scores_gemma":[0.00011161531,0.0002349534,0.0004968695,0.00018912736,0.00026535752,0.00025702186,0.00019721963,0.000574887,0.00085072813],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021782635,0.0000052540727,0.00015272852,0.000015239627,0.0000021788774,0.00006992308,0.000013821399,0.000023139977,0.99910825,0.00010852178,0.000025871588,0.000453202],"study_design_scores_gemma":[0.00003798782,0.00019223064,0.035545763,0.000026932721,0.00007165981,0.0012524753,0.00020750308,0.0017054607,0.9485945,0.00021065182,0.012132689,0.000022122287],"about_ca_topic_score_codex":0.0039219554,"about_ca_topic_score_gemma":0.0063180425,"teacher_disagreement_score":0.0039219554,"about_ca_system_score_codex":0.0004908953,"about_ca_system_score_gemma":0.00036077347,"threshold_uncertainty_score":0.0077982545},"labels":[],"label_agreement":null},{"id":"W2938240243","doi":"10.15252/embr.201948169","title":"cTAZ: a safeguard factor of antiviral response","year":2019,"lang":"en","type":"letter","venue":"EMBO Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Associazione Italiana per la Ricerca sul Cancro","keywords":"Cancer; Library science; Biology; Genetics; Computer science","score_opus":0.01380548799036086,"score_gpt":0.24908472220336017,"score_spread":0.23527923421299932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2938240243","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0015736601,0.00658648,0.00045656288,0.918973,0.06823761,0.000018173334,0.00007086658,0.00006021692,0.0040234015],"genre_scores_gemma":[0.042657223,0.007867927,0.0008371854,0.7394294,0.1826114,0.00011437408,0.00009700483,0.000056692115,0.026328757],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99922097,0.00020267641,0.00008680834,0.00012893874,0.00022360074,0.0001370215],"domain_scores_gemma":[0.99783355,0.0012048916,0.00019504126,0.0001294029,0.0002786283,0.0003584731],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015581442,0.00077655935,0.0008516893,0.00039581812,0.0017805446,0.0028738475,0.0008401473,0.020713443,0.0038692164],"category_scores_gemma":[0.007541839,0.00044460365,0.0005193066,0.00025448352,0.0025629385,0.0021695637,0.0012799687,0.01742388,0.0039010714],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006457162,0.000051466825,0.0006217787,0.0001520558,0.0000350247,0.0047566704,0.00012239181,0.00013487197,0.0031622816,0.013623061,0.9487493,0.027945321],"study_design_scores_gemma":[0.00041604612,0.00014294646,0.0012266119,0.00014117091,0.00004749269,0.0037602074,0.0001833985,0.0007568307,0.0046859435,0.03400735,0.9545693,0.00006267649],"about_ca_topic_score_codex":0.0007377727,"about_ca_topic_score_gemma":0.0008074309,"teacher_disagreement_score":0.020713443,"about_ca_system_score_codex":0.0025147076,"about_ca_system_score_gemma":0.0012188083,"threshold_uncertainty_score":0.018245518},"labels":[],"label_agreement":null},{"id":"W2941388405","doi":"10.1089/jir.2018.0166","title":"Poly(I:C)-Mediated Death of Human Prostate Cancer Cell Lines Is Induced by Interleukin-27 Treatment","year":2019,"lang":"en","type":"article","venue":"Journal of Interferon & Cytokine Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada; Prostate Cancer Fight Foundation; Prostate Cancer Foundation","keywords":"DU145; Programmed cell death; Cancer research; Prostate cancer; Cytokine; Cancer cell; Cell culture; Immune system; Biology; Immunogenic cell death; Cancer; Apoptosis; Immunology; Chemistry; LNCaP; Biochemistry","score_opus":0.05281185834991308,"score_gpt":0.3708904119865048,"score_spread":0.3180785536365917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2941388405","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9809188,0.005119323,0.0063567623,0.00013752721,0.00009207182,0.00014787831,0.0017155452,0.00014697119,0.0053650485],"genre_scores_gemma":[0.9894875,0.001810599,0.0028831665,0.000078048586,0.000018139943,0.00017159483,0.0021633743,0.000019840845,0.003367809],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998171,0.000038902977,0.000018973435,0.000031779797,0.000050276823,0.000043055057],"domain_scores_gemma":[0.9999052,0.00002284861,0.00001863676,0.00001783917,0.0000176588,0.000017786067],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013876919,0.00032395156,0.00027259323,0.00021547165,0.00018627122,0.00025827345,0.00014730376,0.00016342574,0.002406233],"category_scores_gemma":[0.000085724234,0.00010178821,0.0003228296,0.00028669604,0.0001491536,0.0001014836,0.00014920182,0.00053309446,0.000698293],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004406172,0.00013909367,0.0003940754,0.000085787564,0.000013257387,0.00010948929,0.000036733687,0.00014515228,0.9956802,0.00011085834,0.00020487214,0.0026397367],"study_design_scores_gemma":[0.000033024728,0.0010027642,0.005744347,0.000010265827,0.00001880119,0.00033923367,0.00003271814,0.0009082693,0.9885068,0.00003130132,0.003367079,0.0000054738853],"about_ca_topic_score_codex":0.0007835907,"about_ca_topic_score_gemma":0.00082325155,"teacher_disagreement_score":0.002406233,"about_ca_system_score_codex":0.00019883891,"about_ca_system_score_gemma":0.00022913849,"threshold_uncertainty_score":0.008049667},"labels":[],"label_agreement":null},{"id":"W2944665679","doi":"10.1080/23723556.2019.1607456","title":"Sp3-cificity of TNF-α expression promotes the Smac mimetic-mediated killing of cancer cells","year":2019,"lang":"en","type":"article","venue":"Molecular & Cellular Oncology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Children's Hospital of Eastern Ontario","funders":"","keywords":"Tumor necrosis factor alpha; Transcription factor; Small interfering RNA; Activator (genetics); Cancer research; Molecular biology; Cancer cell; Apoptosis; Cytokine; Biology; Cell biology; Chemistry; Cancer; RNA; Gene; Immunology; Genetics","score_opus":0.008634975994258757,"score_gpt":0.25298727982798863,"score_spread":0.24435230383372988,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2944665679","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99463934,0.0011903688,0.0022011367,0.00009935479,0.000042025957,0.000040782397,0.0004042424,0.00008815065,0.0012946284],"genre_scores_gemma":[0.9970536,0.0003547262,0.001073512,0.000048936454,0.000008270353,0.000027765387,0.0005792889,0.0000126458535,0.000841146],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998318,0.000028681901,0.00001595455,0.000026497295,0.000053180625,0.000043822896],"domain_scores_gemma":[0.9998504,0.000038984646,0.00003736516,0.00001910438,0.000019257872,0.000034921122],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019963068,0.0002594747,0.00028076078,0.00017388238,0.00015054429,0.00029619338,0.00013061003,0.00025337734,0.0013606411],"category_scores_gemma":[0.00021041589,0.00013397049,0.0002542485,0.00017110707,0.00020564965,0.00010247774,0.00015515226,0.0007192328,0.0004511747],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013162725,0.000027104108,0.00012777867,0.00001640987,0.0000033147028,0.00002545768,0.000005028322,0.000030789874,0.99889636,0.000029194667,0.000036054935,0.0006709093],"study_design_scores_gemma":[0.000038721588,0.00040662452,0.0033879352,0.0000054473635,0.00001475776,0.0003050398,0.000018565077,0.0011008444,0.9933728,0.00005023832,0.0012959865,0.000003028666],"about_ca_topic_score_codex":0.00034252962,"about_ca_topic_score_gemma":0.0005874755,"teacher_disagreement_score":0.0013606411,"about_ca_system_score_codex":0.00024277899,"about_ca_system_score_gemma":0.00021553124,"threshold_uncertainty_score":0.004551828},"labels":[],"label_agreement":null},{"id":"W2945434209","doi":"10.1101/628370","title":"Missense mutations in the MLKL ‘brace’ region lead to lethal neonatal inflammation in mice and are present in high frequency in humans","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Missense mutation; Necroptosis; Compound heterozygosity; Biology; Inflammation; Effector; Phenotype; Genetics; Heterozygote advantage; Gene; Programmed cell death; Cell biology; Immunology; Cancer research; Allele; Apoptosis","score_opus":0.015115242777574256,"score_gpt":0.23156164160396248,"score_spread":0.21644639882638822,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2945434209","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937355,0.0010566803,0.0029620172,0.00018177636,0.000025582056,0.000023732751,0.0008079095,0.00019497219,0.0010118163],"genre_scores_gemma":[0.9949033,0.0007047771,0.0022209464,0.00010141253,0.00002829887,0.00001573745,0.0007629664,0.00006973485,0.0011927247],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997367,0.00004057025,0.000029962677,0.00008800468,0.00006788972,0.00003686815],"domain_scores_gemma":[0.9997509,0.000055866607,0.0001091125,0.00002509822,0.000010602434,0.00004840393],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020788566,0.0006107576,0.00043947663,0.0005124349,0.00018719156,0.000317975,0.00021852857,0.0005812706,0.002739841],"category_scores_gemma":[0.00037146654,0.00019499731,0.00028556204,0.00026509073,0.0003738102,0.00016843001,0.00033525296,0.0006723608,0.000529286],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00069220434,0.00006984635,0.013747275,0.00010528928,0.00011196191,0.0077730496,0.00013651978,0.00025375548,0.96704805,0.00059601647,0.0005288235,0.0089372685],"study_design_scores_gemma":[0.0005652432,0.0013549525,0.26758572,0.0001589197,0.00041556216,0.13427685,0.00039006965,0.0022672927,0.56987023,0.0011368257,0.021898445,0.00007987556],"about_ca_topic_score_codex":0.0004467774,"about_ca_topic_score_gemma":0.0004979833,"teacher_disagreement_score":0.002739841,"about_ca_system_score_codex":0.0001495264,"about_ca_system_score_gemma":0.0001617869,"threshold_uncertainty_score":0.009165704},"labels":[],"label_agreement":null},{"id":"W2945448169","doi":"10.3390/jcm8050750","title":"Molecular Genetics and Interferon Signature in the Italian Aicardi Goutières Syndrome Cohort: Report of 12 New Cases and Literature Review","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"Ministero della Salute","keywords":"Medicine; Interferon; Gene; Phenotype; Exome sequencing; Mutation; Genetics; Biology; Virology","score_opus":0.022366877066179142,"score_gpt":0.3532484157112079,"score_spread":0.3308815386450288,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2945448169","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.73783094,0.24833699,0.00202161,0.001206941,0.00026905618,0.00017900662,0.0014592774,0.0002558421,0.008440407],"genre_scores_gemma":[0.84691435,0.14429289,0.002289707,0.00063055765,0.0010701119,0.00012908161,0.0031184235,0.00007308952,0.0014818028],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.9996371,0.000032759533,0.0001211974,0.00010239439,0.000054705055,0.000051866515],"domain_scores_gemma":[0.9993661,0.00018693793,0.00023249009,0.00007034268,0.00007044022,0.000073622876],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004118962,0.0008054399,0.00086332887,0.0054688104,0.00043080095,0.0010229489,0.0008297865,0.0009526132,0.001980955],"category_scores_gemma":[0.0010621399,0.00043222608,0.00057383615,0.0029697912,0.0006730507,0.0005541877,0.00054967013,0.00035553382,0.0007795031],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004688064,0.00016425607,0.34321082,0.0033467438,0.0006919957,0.40782636,0.0013205648,0.00048388512,0.016153973,0.00053970015,0.010041452,0.2157514],"study_design_scores_gemma":[0.00004727455,0.00009176671,0.20771997,0.00088640756,0.00059892057,0.7626035,0.00037065017,0.00027369347,0.0012604173,0.0003536932,0.025729667,0.00006404945],"about_ca_topic_score_codex":0.0011428196,"about_ca_topic_score_gemma":0.000960816,"teacher_disagreement_score":0.0054688104,"about_ca_system_score_codex":0.00040622227,"about_ca_system_score_gemma":0.00038424262,"threshold_uncertainty_score":0.0066269636},"labels":[],"label_agreement":null},{"id":"W2945554329","doi":"10.1101/634014","title":"OTUB1 is a key regulator of RIG-I dependent immune signalling and is targeted for proteasomal degradation by influenza A NS1","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"BNP Paribas Cardif; Croucher Foundation","keywords":"RIG-I; Cell biology; Ubiquitin; IRF3; Biology; Innate immune system; MDA5; Regulator; Signal transduction; Immune system; Biochemistry; RNA interference; RNA; Immunology; Gene","score_opus":0.012284780345519667,"score_gpt":0.2246046638910666,"score_spread":0.21231988354554693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2945554329","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98200375,0.006204486,0.00581482,0.00016408399,0.00008572149,0.000036805293,0.0022320882,0.00022434445,0.0032340204],"genre_scores_gemma":[0.9897104,0.0009981307,0.0015538153,0.00007209014,0.000015325299,0.000029299223,0.0025316447,0.000047413323,0.005041821],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998659,0.000011896861,0.0000094223815,0.000033494052,0.00004723004,0.00003207414],"domain_scores_gemma":[0.999882,0.000009072561,0.000045884917,0.0000085560105,0.000017421651,0.000037115853],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009845506,0.00051872234,0.00026599687,0.00026750757,0.0003862125,0.0004232244,0.00016861095,0.0002658407,0.0026818707],"category_scores_gemma":[0.0000936619,0.00014539252,0.00034347596,0.00023004632,0.0001660928,0.0002024033,0.00030716357,0.00039283265,0.0009250041],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017500004,0.000011194539,0.0009599679,0.00006119281,0.000009236443,0.00014345035,0.0000138729365,0.00011805295,0.99612147,0.00012528164,0.00020443623,0.002056698],"study_design_scores_gemma":[0.000011447852,0.00009338552,0.03808685,0.000022494663,0.000028491595,0.0011889525,0.00006628709,0.0033397397,0.9447228,0.00022354066,0.012201747,0.000014246021],"about_ca_topic_score_codex":0.0006661189,"about_ca_topic_score_gemma":0.0009087221,"teacher_disagreement_score":0.0026818707,"about_ca_system_score_codex":0.00059283,"about_ca_system_score_gemma":0.00021683848,"threshold_uncertainty_score":0.00897181},"labels":[],"label_agreement":null},{"id":"W2946416264","doi":"10.1128/mbio.00919-19","title":"Herpes Simplex Virus 1 Tegument Protein UL46 Inhibits TANK-Binding Kinase 1-Mediated Signaling","year":2019,"lang":"en","type":"article","venue":"mBio","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":82,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Natural Science Foundation of China; National Science Foundation","keywords":"Viral tegument; Herpes simplex virus; Virology; Cell biology; Virus; Kinase; Biology; Chemistry","score_opus":0.010235703508364979,"score_gpt":0.22733361506519315,"score_spread":0.21709791155682817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2946416264","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9842046,0.006481823,0.0029478061,0.00025719832,0.00012677498,0.000028310558,0.0003025267,0.00013367357,0.005517289],"genre_scores_gemma":[0.9957157,0.0012504063,0.0006443892,0.00003628625,0.000014281932,0.000013633843,0.0001909435,0.000009332794,0.002125183],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984074,0.000039626626,0.000013619147,0.000017012524,0.000032508833,0.000056455712],"domain_scores_gemma":[0.99992,0.000018182162,0.000019877143,0.000012371046,0.0000063602147,0.000023260662],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015834636,0.00030376183,0.00028081753,0.00012500392,0.00012433782,0.00032464936,0.00019085866,0.00018694844,0.0019418002],"category_scores_gemma":[0.00015347413,0.00007969802,0.00018419826,0.00009087065,0.00015767454,0.00022547114,0.00018736102,0.00046554755,0.0007203941],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038016387,0.00007570057,0.0001476495,0.00006001815,0.000008209296,0.00003455699,0.000013392613,0.0001972711,0.99642146,0.0003046834,0.00015764269,0.0021993818],"study_design_scores_gemma":[0.000023418272,0.00019214001,0.0010522156,0.000004608429,0.000005941888,0.00009756088,0.000011771595,0.0012662751,0.99546707,0.00006595157,0.0018107996,0.0000023559269],"about_ca_topic_score_codex":0.00042833114,"about_ca_topic_score_gemma":0.00039792844,"teacher_disagreement_score":0.0019418002,"about_ca_system_score_codex":0.00023501657,"about_ca_system_score_gemma":0.00025318653,"threshold_uncertainty_score":0.0064959526},"labels":[],"label_agreement":null},{"id":"W2947489447","doi":"10.1016/j.smim.2019.05.001","title":"Type I interferon signaling, regulation and gene stimulation in chronic virus infection","year":2019,"lang":"en","type":"review","venue":"Seminars in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":156,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Princess Margaret Cancer Centre; University Health Network","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Immune system; Immunology; Interferon; Biology; Signal transduction; Virus; Inflammation; Innate immune system; Viral replication; Chronic infection; Cell biology","score_opus":0.03171834405678439,"score_gpt":0.31949753702531425,"score_spread":0.28777919296852983,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2947489447","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00010328342,0.99827933,0.0001311116,0.00023258859,0.0006083749,0.0000025276424,0.0000115283565,0.0000055367595,0.0006257682],"genre_scores_gemma":[0.0006959254,0.99695337,0.00013693563,0.000245471,0.0010390249,0.000008005424,0.000029085519,0.000001382399,0.00089086266],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99986696,0.000019925528,0.000019033483,0.000022848959,0.000050166393,0.000021027075],"domain_scores_gemma":[0.9998437,0.00006704411,0.000028909959,0.0000062997515,0.000027342438,0.000026669168],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00067290734,0.0010437141,0.0012612615,0.001111032,0.0002367314,0.0010467337,0.0008829936,0.0012223667,0.0021773973],"category_scores_gemma":[0.00045870605,0.0002711373,0.00026230034,0.0014829484,0.00068178517,0.0013186007,0.0008282397,0.0018094752,0.0021906828],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024251196,0.00006924178,0.00014758836,0.01134592,0.000048149137,0.00026508304,0.000045493227,0.0003547963,0.0061777863,0.005478738,0.053028118,0.9227966],"study_design_scores_gemma":[0.0000378516,0.00010293284,0.0010866205,0.0018534804,0.00005979408,0.0009938646,0.000045928642,0.00011553906,0.00073520874,0.003678583,0.991273,0.000017265587],"about_ca_topic_score_codex":0.0004181052,"about_ca_topic_score_gemma":0.00079333514,"teacher_disagreement_score":0.0021773973,"about_ca_system_score_codex":0.000662988,"about_ca_system_score_gemma":0.00076480024,"threshold_uncertainty_score":0.007284105},"labels":[],"label_agreement":null},{"id":"W2947495774","doi":"10.1126/sciadv.aav7999","title":"Control of antiviral innate immune response by protein geranylgeranylation","year":2019,"lang":"en","type":"article","venue":"Science Advances","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; National Institute of Allergy and Infectious Diseases; U.S. Department of Veterans Affairs","keywords":"Innate immune system; Geranylgeranylation; Biology; Cell biology; Ubiquitin ligase; Immune system; Ubiquitin; Prenylation; Immunology; Biochemistry","score_opus":0.004202738331015419,"score_gpt":0.247153125562781,"score_spread":0.24295038723176557,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2947495774","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9824346,0.0037280968,0.009128304,0.0005566299,0.0001297026,0.00003809012,0.0003320881,0.00017736193,0.0034753196],"genre_scores_gemma":[0.9927503,0.00070239033,0.0028143534,0.000094130184,0.000015379086,0.000015106127,0.00016900152,0.00001879262,0.0034205338],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999821,0.00003605515,0.000011811789,0.000043104403,0.000033498683,0.00005452442],"domain_scores_gemma":[0.9999192,0.0000071419117,0.000027028766,0.000013644839,0.000010960601,0.000022046395],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018593727,0.00038492656,0.00021561324,0.00016807835,0.00017513683,0.0002816941,0.00015548267,0.00025464952,0.002270297],"category_scores_gemma":[0.00009591043,0.00009273082,0.00025432438,0.000083881496,0.0003319397,0.0002971253,0.0003575822,0.0006164743,0.0004706238],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008314452,0.000006623321,0.00013480741,0.000018146317,0.0000035994785,0.00003325472,0.0000084887115,0.00003735639,0.99814,0.00036229126,0.000034868295,0.0011374209],"study_design_scores_gemma":[0.000014315108,0.00014201738,0.0053891507,0.0000058630203,0.000009685275,0.0002739104,0.00004261956,0.00073287165,0.9888784,0.0003585497,0.004147248,0.000005481158],"about_ca_topic_score_codex":0.0001803295,"about_ca_topic_score_gemma":0.00045261605,"teacher_disagreement_score":0.002270297,"about_ca_system_score_codex":0.0003751524,"about_ca_system_score_gemma":0.00018780532,"threshold_uncertainty_score":0.007594943},"labels":[],"label_agreement":null},{"id":"W2948704538","doi":"10.1371/journal.pgen.1008180","title":"Exome sequencing in multiple sclerosis families identifies 12 candidate genes and nominates biological pathways for the genesis of disease","year":2019,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; University of British Columbia","funders":"Institute of Genetics; Instituto de Salud Carlos III; Canadian Institutes of Health Research; Vancouver Coastal Health Research Institute; Ministerio de Economía y Competitividad; Ministero della Salute; Red Española de Esclerosis Múltiple; Michael Smith Health Research BC; Canada Research Chairs; European Regional Development Fund; Vancouver Foundation","keywords":"Biology; Exome sequencing; Multiple sclerosis; TREM2; Genetics; Neurodegeneration; Exome; Inflammasome; Inflammation; Innate immune system; Missense mutation; Gene; Immunology; Immune system; Disease; Microglia; Mutation; Medicine","score_opus":0.06786077504356934,"score_gpt":0.22895778178193127,"score_spread":0.16109700673836191,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2948704538","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99784636,0.00036236487,0.0008097097,0.000044766806,0.0000046652576,0.0000079368765,0.00059302256,0.000013814267,0.00031748187],"genre_scores_gemma":[0.9971194,0.00032801807,0.0011972075,0.00005525332,0.000008403471,0.000018667683,0.0008679724,0.000008609024,0.00039647328],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998035,0.000036490786,0.000023726718,0.000075830125,0.00003350033,0.00002699125],"domain_scores_gemma":[0.99977666,0.000101607184,0.000051032133,0.000022082768,0.000017876897,0.000030777413],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023159741,0.00046753322,0.0003021389,0.0008726133,0.00048918143,0.00027132296,0.00016238315,0.00046284992,0.0020254806],"category_scores_gemma":[0.0008638371,0.00013617676,0.00028297055,0.0006648499,0.00023601945,0.00015112809,0.00034354947,0.00025136862,0.00022692088],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002625547,0.00020379241,0.5377469,0.0002929804,0.0006952967,0.028858356,0.0012553822,0.0017583015,0.3625518,0.00071973744,0.0017678805,0.06152401],"study_design_scores_gemma":[0.0001518742,0.00046304337,0.91064996,0.00009844434,0.00042928496,0.046097066,0.0004314331,0.0025705884,0.03231981,0.0010306499,0.005720912,0.000036960417],"about_ca_topic_score_codex":0.00076851,"about_ca_topic_score_gemma":0.0013698917,"teacher_disagreement_score":0.0020254806,"about_ca_system_score_codex":0.00017885001,"about_ca_system_score_gemma":0.00013989849,"threshold_uncertainty_score":0.0067759156},"labels":[],"label_agreement":null},{"id":"W2950867635","doi":"10.64628/ab.fnarqs7nx","title":"New action plan to save Madagascar’s at-risk lemurs","year":2014,"lang":"en","type":"article","venue":"","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Lemur; Action (physics); Action plan; Plan (archaeology); Geography; Environmental planning; Business; Ecology; Biology; Primate; Archaeology; Physics","score_opus":0.017920215973735977,"score_gpt":0.2527160086032225,"score_spread":0.23479579262948655,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2950867635","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13355424,0.016073218,0.0074877064,0.62664187,0.01760092,0.0006093773,0.0032171148,0.0012575696,0.19355801],"genre_scores_gemma":[0.53642267,0.008290001,0.027383719,0.1583787,0.003024379,0.0011823027,0.003686891,0.00015348967,0.26147792],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99959475,0.00008030957,0.000010671435,0.000027043454,0.000061396524,0.00022580518],"domain_scores_gemma":[0.9990038,0.000085755935,0.000072468094,0.000038437374,0.00015908605,0.00064040243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072729425,0.0007332094,0.0002612247,0.000452445,0.0020225,0.001440377,0.00097380683,0.0033518441,0.019439723],"category_scores_gemma":[0.0014801191,0.00013157807,0.00045466467,0.00018322465,0.00094208174,0.0010130714,0.0029363628,0.0035541249,0.0017104221],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008417094,0.00092390407,0.015852021,0.0010108346,0.00016359553,0.004823655,0.003763641,0.0013490943,0.0149253355,0.040396914,0.72297174,0.19297762],"study_design_scores_gemma":[0.00008385591,0.0004656452,0.018740362,0.0004001305,0.000070091366,0.0008367545,0.0039044255,0.0005437489,0.0014171092,0.007258851,0.9662349,0.00004412167],"about_ca_topic_score_codex":0.023740966,"about_ca_topic_score_gemma":0.04928574,"teacher_disagreement_score":0.023740966,"about_ca_system_score_codex":0.0014164979,"about_ca_system_score_gemma":0.010083103,"threshold_uncertainty_score":0.06503236},"labels":[],"label_agreement":null},{"id":"W2953027750","doi":"10.26508/lsa.201800215","title":"Expression of a constitutively active human<i>STING</i>mutant in hematopoietic cells produces an<i>Ifnar1</i>-dependent vasculopathy in mice","year":2019,"lang":"en","type":"article","venue":"Life Science Alliance","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Bone and Joint Health Institute; University of Calgary","funders":"Health Research Council of New Zealand; Canadian Institutes of Health Research; University of Auckland; University of Calgary","keywords":"Sting; Proinflammatory cytokine; Inflammation; Haematopoiesis; Stimulator of interferon genes; Phenotype; Biology; Mutant; Immunology; Interferon; Pathology; Medicine; Gene; Cell biology; Immune system; Innate immune system; Genetics","score_opus":0.01481474284483459,"score_gpt":0.26827451512593026,"score_spread":0.2534597722810957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2953027750","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9893064,0.00033323048,0.005581854,0.0002580805,0.0000566893,0.00011691166,0.0011206192,0.00038601222,0.0028401653],"genre_scores_gemma":[0.9870248,0.00038620326,0.005891669,0.00011779736,0.000027254946,0.00010636453,0.00095276156,0.00014594346,0.0053472123],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99967515,0.00007089825,0.00004736861,0.000064612344,0.00006906844,0.00007286856],"domain_scores_gemma":[0.9996371,0.000053453103,0.00013742373,0.000039573355,0.000014876751,0.00011756314],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003564478,0.00066017243,0.00025248673,0.00067439006,0.00028816157,0.0004279065,0.0004233489,0.00060007203,0.002390954],"category_scores_gemma":[0.00015678983,0.00043031562,0.00044080016,0.0002067136,0.0006546286,0.00028525185,0.00028297407,0.0012451072,0.00086874765],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014488044,0.00008014301,0.00016550536,0.000020323203,0.000005745076,0.0001170401,0.000031936313,0.00010035652,0.9982315,0.00037657697,0.00006595327,0.00066022144],"study_design_scores_gemma":[0.0001210884,0.0007169866,0.0033146467,0.000028397895,0.000028901846,0.0011435443,0.0000596257,0.0027172212,0.9876796,0.00016509346,0.004012948,0.000012082094],"about_ca_topic_score_codex":0.0006743836,"about_ca_topic_score_gemma":0.00095991837,"teacher_disagreement_score":0.002390954,"about_ca_system_score_codex":0.00054945244,"about_ca_system_score_gemma":0.00025631906,"threshold_uncertainty_score":0.007998526},"labels":[],"label_agreement":null},{"id":"W2953042878","doi":"10.1101/131714","title":"Structural basis of STAT2 recognition by IRF9 reveals molecular insights into ISGF3 function","year":2017,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Universität Wien; Université de Montréal; European Synchrotron Radiation Facility; McMaster University","keywords":"STAT2; STAT1; Gene; Coiled coil; Cell biology; Computational biology; Biology; Genetics; stat","score_opus":0.013624285885357286,"score_gpt":0.22496910373222165,"score_spread":0.21134481784686437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2953042878","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99184495,0.0008736441,0.0032253994,0.00034791254,0.00006003646,0.00001192697,0.00041705152,0.00007844596,0.003140602],"genre_scores_gemma":[0.995834,0.00029175266,0.0020133764,0.00007615789,0.000013715632,0.000006934952,0.0007821016,0.00001230659,0.0009696297],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999946,0.000007666847,0.0000024821647,0.000010402784,0.00001693903,0.000016447177],"domain_scores_gemma":[0.99993706,0.0000124970475,0.000014317322,0.000005699498,0.000008200501,0.000022205557],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010679832,0.0003100995,0.00017911248,0.00012809488,0.00025235076,0.00029522102,0.00037486956,0.0003322503,0.0037027153],"category_scores_gemma":[0.00009425162,0.00010669073,0.00036143206,0.00011083512,0.00026512335,0.00018962754,0.000218424,0.0008253216,0.0007835254],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00070513575,0.00009602735,0.0027433857,0.000105325395,0.000023812567,0.00052137196,0.000053374893,0.0030260154,0.985479,0.0027610103,0.00083231775,0.0036532786],"study_design_scores_gemma":[0.00025125383,0.00039492472,0.03316359,0.000059045327,0.000080723024,0.0017003223,0.00031173544,0.05584296,0.88507646,0.004949837,0.018112076,0.00005707511],"about_ca_topic_score_codex":0.0014741155,"about_ca_topic_score_gemma":0.0010980985,"teacher_disagreement_score":0.0037027153,"about_ca_system_score_codex":0.0005326767,"about_ca_system_score_gemma":0.00033190867,"threshold_uncertainty_score":0.012386858},"labels":[],"label_agreement":null},{"id":"W2954842563","doi":"10.1158/1538-7445.am2019-3854","title":"Abstract 3854: Preclinical characterization of a novel non-cyclic dinucleotide small molecule STING agonist with potent antitumor activity in mice","year":2019,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trillium Therapeutics (Canada)","funders":"","keywords":"Sting; Stimulator of interferon genes; Innate immune system; Immune system; Medicine; Biology; Immunology; Cancer research; Cell biology","score_opus":0.06887248890523982,"score_gpt":0.3650036790657241,"score_spread":0.2961311901604843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2954842563","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98806304,0.0017601842,0.00413694,0.00017518668,0.00008132949,0.0004941193,0.001974273,0.00017460091,0.0031402593],"genre_scores_gemma":[0.9807113,0.0021519978,0.004130326,0.00013808695,0.000023224058,0.0005541512,0.0038328872,0.0000380393,0.008419964],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987185,0.000020388461,0.000011258504,0.000022221138,0.00003274002,0.00004153142],"domain_scores_gemma":[0.9998983,0.000014680522,0.000022654305,0.0000126755485,0.000013738081,0.000038022677],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000282097,0.000682089,0.0004450975,0.00036767454,0.00013833426,0.0002660671,0.00034680497,0.00052854564,0.0023782165],"category_scores_gemma":[0.00011777211,0.00016086164,0.00033349078,0.0002205317,0.00017365406,0.00032457075,0.00010501137,0.0010756719,0.0006841189],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00092439726,0.0014415545,0.00013432487,0.00009134878,0.00001466698,0.000054560845,0.00002686482,0.00048574974,0.989851,0.00016903863,0.00032525303,0.0064813164],"study_design_scores_gemma":[0.0003874344,0.020384055,0.0016252848,0.000020194335,0.000055054268,0.00022179932,0.000021703285,0.0015100335,0.9709446,0.00006106099,0.0047591166,0.000009673634],"about_ca_topic_score_codex":0.0005803602,"about_ca_topic_score_gemma":0.00088022626,"teacher_disagreement_score":0.0023782165,"about_ca_system_score_codex":0.0003239043,"about_ca_system_score_gemma":0.0003235432,"threshold_uncertainty_score":0.007955968},"labels":[],"label_agreement":null},{"id":"W2963072290","doi":"10.1016/j.fsi.2019.07.054","title":"Two DExD/H-box helicases, DDX3 and DHX9, identified in rainbow trout are able to bind dsRNA","year":2019,"lang":"en","type":"article","venue":"Fish & Shellfish Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University; University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Helicase; RNA Helicase A; Rainbow trout; RNA silencing; Cell biology; DEAD box; RNA; Genetics; Virology; Gene; RNA interference; Fish <Actinopterygii>; Fishery","score_opus":0.008020070979995944,"score_gpt":0.23790182433521534,"score_spread":0.2298817533552194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2963072290","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99106896,0.00077885296,0.00512261,0.00006553014,0.000043501044,0.000032930988,0.0013126329,0.00010279983,0.0014721674],"genre_scores_gemma":[0.9907114,0.00017813916,0.0026008845,0.0000797,0.00000879042,0.000023200946,0.00234655,0.000012639182,0.0040387507],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989414,0.0000055397536,0.0000073325727,0.000031387775,0.000028094635,0.00003335207],"domain_scores_gemma":[0.99987423,0.000019043478,0.000035744953,0.000014519576,0.000014433676,0.000042029937],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001105866,0.00028213116,0.0003026189,0.00022176249,0.00025063177,0.00031066884,0.0001536507,0.00034088662,0.0028533617],"category_scores_gemma":[0.00013524879,0.00013879128,0.0004611612,0.00012906211,0.000285257,0.00015669044,0.00033637558,0.0003197738,0.00067542336],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000106019834,0.0000069501025,0.0029032514,0.000030545125,0.000009388846,0.00006477446,0.000020022377,0.000026285656,0.9956785,0.00004753829,0.00003684832,0.0010699999],"study_design_scores_gemma":[0.000027366295,0.00015470445,0.12770875,0.000007040361,0.00002303515,0.00079644634,0.00015790745,0.00065163325,0.8665019,0.0001333749,0.0038235243,0.000014244657],"about_ca_topic_score_codex":0.0010490888,"about_ca_topic_score_gemma":0.001677114,"teacher_disagreement_score":0.0028533617,"about_ca_system_score_codex":0.0002557698,"about_ca_system_score_gemma":0.0001751861,"threshold_uncertainty_score":0.009545445},"labels":[],"label_agreement":null},{"id":"W2966052747","doi":"10.1371/journal.ppat.1007949","title":"HCV and flaviviruses hijack cellular mechanisms for nuclear STAT2 degradation: Up-regulation of PDLIM2 suppresses the innate immune response","year":2019,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; University of Alberta","keywords":"STAT2; Innate immune system; Interferon; Immune system; Biology; STAT1; Ubiquitin ligase; Cell biology; Immunology; Signal transduction; Ubiquitin; STAT protein; STAT3; Gene; Genetics","score_opus":0.015237840396660025,"score_gpt":0.22040031678316088,"score_spread":0.20516247638650087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2966052747","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9905991,0.0022052717,0.003797457,0.00013542103,0.00004104632,0.000018471143,0.0005516714,0.00018757737,0.0024640528],"genre_scores_gemma":[0.99531436,0.0003462025,0.0012672658,0.000057843,0.00000655912,0.000017507358,0.0005126285,0.000022151708,0.0024554858],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998405,0.000020621303,0.000015809244,0.000039883478,0.000038874623,0.000044273136],"domain_scores_gemma":[0.99991596,0.000010618614,0.00002326891,0.000015659356,0.000009383163,0.000025051804],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014901982,0.00035212125,0.00022490819,0.00020208953,0.00018006371,0.0003742538,0.0001356647,0.00023460061,0.0015833005],"category_scores_gemma":[0.00009451812,0.0001488433,0.00033306787,0.0001100202,0.0002544806,0.0002576996,0.00023915818,0.00041164868,0.0003725146],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000095514544,0.000010182544,0.00023349492,0.000022191189,0.0000035726168,0.000026684007,0.0000059400263,0.00003756182,0.99890137,0.000066718,0.000030424697,0.0005663982],"study_design_scores_gemma":[0.00001386147,0.00016355209,0.0077420357,0.0000047775297,0.000010968421,0.00036922944,0.000020444724,0.0009694934,0.98894185,0.000049946782,0.0017094397,0.000004294284],"about_ca_topic_score_codex":0.00041685774,"about_ca_topic_score_gemma":0.0007982635,"teacher_disagreement_score":0.0015833005,"about_ca_system_score_codex":0.00039988843,"about_ca_system_score_gemma":0.00018622825,"threshold_uncertainty_score":0.005296707},"labels":[],"label_agreement":null},{"id":"W2966453295","doi":"10.1007/s10875-019-00667-8","title":"LINE-1-Mediated AluYa5 Insertion Underlying Complete Autosomal Recessive IFN-γR1 Deficiency","year":2019,"lang":"en","type":"letter","venue":"Journal of Clinical Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"National Institute of Allergy and Infectious Diseases; Fonds de Recherche en Santé Respiratoire; Agence Nationale de la Recherche","keywords":"Genetics; Medical microbiology; Medicine; Biology; Immunology","score_opus":0.12250783395117487,"score_gpt":0.3811783042779783,"score_spread":0.2586704703268034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2966453295","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8121662,0.0045462796,0.011480553,0.10404662,0.009253881,0.00027921578,0.0016542696,0.001182376,0.055390697],"genre_scores_gemma":[0.97291166,0.00092972437,0.0029964827,0.010880687,0.0023180055,0.000043765234,0.00020028866,0.00012535944,0.009594012],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99957174,0.00008925356,0.000043600507,0.00009734357,0.00008171736,0.00011625571],"domain_scores_gemma":[0.9988715,0.00063928525,0.00017325954,0.000070423084,0.00006459662,0.00018091484],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034400355,0.0013066044,0.000778086,0.0006029124,0.0009592916,0.0009639958,0.0010420351,0.0066215564,0.003929742],"category_scores_gemma":[0.0017289666,0.00036051925,0.0008149046,0.00034627854,0.001274733,0.0005850055,0.0006113898,0.004333271,0.0011576103],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019164148,0.00003371568,0.0014763626,0.000042434618,0.000028569133,0.9808106,0.00009659304,0.00009917475,0.011002011,0.001058688,0.0030217269,0.0021384258],"study_design_scores_gemma":[0.00014308366,0.00019406095,0.0047792247,0.00007181428,0.00009220678,0.9700122,0.00014454804,0.0012222533,0.009944334,0.0010973875,0.012272273,0.000026659765],"about_ca_topic_score_codex":0.0013225564,"about_ca_topic_score_gemma":0.000985666,"teacher_disagreement_score":0.0066215564,"about_ca_system_score_codex":0.0010084357,"about_ca_system_score_gemma":0.00038203452,"threshold_uncertainty_score":0.013146281},"labels":[],"label_agreement":null},{"id":"W2968161214","doi":"10.3390/cells8080919","title":"The Combination of IFN β and TNF Induces an Antiviral and Immunoregulatory Program via Non-Canonical Pathways Involving STAT2 and IRF9","year":2019,"lang":"en","type":"article","venue":"Cells","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Université de Montréal; McGill University; Génome Québec; Mitacs; University of Ottawa; Cleveland Clinic","keywords":"STAT2; STAT1; Interferon; Gene; STAT protein; Janus kinase; Tumor necrosis factor alpha; Biology; Transcription factor; Transcription (linguistics); STAT3; Signal transduction; Transcriptional regulation; Cell biology; Cancer research; Genetics; Immunology","score_opus":0.007634074845777863,"score_gpt":0.22636255291940424,"score_spread":0.2187284780736264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2968161214","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9914131,0.001440357,0.004417065,0.00006865758,0.000039963485,0.000024203808,0.00052488747,0.00009891142,0.0019729005],"genre_scores_gemma":[0.9958449,0.00047211832,0.0017231129,0.00007849896,0.000012808996,0.000023133853,0.0005682183,0.000011729806,0.001265495],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980944,0.00002695473,0.000011605618,0.000053532876,0.0000453647,0.000053071526],"domain_scores_gemma":[0.9999362,0.0000093983635,0.000021606662,0.000010421052,0.000008801824,0.000013562016],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013822627,0.00029157984,0.00022952989,0.00020959272,0.000119709934,0.00022569355,0.00007640534,0.00016989022,0.001078805],"category_scores_gemma":[0.0000652322,0.00011665584,0.00028818796,0.00014721515,0.00019834792,0.00012904058,0.00020210612,0.00038918643,0.00030791564],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008021095,0.000009922602,0.0004959036,0.000012104395,0.0000031122252,0.00002551347,0.0000050975377,0.000023804472,0.9984577,0.00003913776,0.0000164763,0.00083104277],"study_design_scores_gemma":[0.000024106912,0.0004736457,0.07023644,0.000012349083,0.000030319105,0.00052577537,0.00009804325,0.001688827,0.92381644,0.00021619406,0.002870595,0.0000073400997],"about_ca_topic_score_codex":0.00014260226,"about_ca_topic_score_gemma":0.0003217358,"teacher_disagreement_score":0.001078805,"about_ca_system_score_codex":0.00016248785,"about_ca_system_score_gemma":0.00014504496,"threshold_uncertainty_score":0.0036090016},"labels":[],"label_agreement":null},{"id":"W2968728008","doi":"10.1186/s13104-019-4562-z","title":"Comparable type I interferon score determination from PAXgene and Tempus whole blood RNA collection and isolation systems","year":2019,"lang":"en","type":"article","venue":"BMC Research Notes","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Rare Disease Foundation","keywords":"TEMPUS; Interferon; Whole blood; Molecular biology; Gene expression; RNA; Recombinant DNA; RNA-Seq; Gene; Biology; Immunology; Genetics; Transcriptome","score_opus":0.09129727336783433,"score_gpt":0.3420923823938837,"score_spread":0.25079510902604935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2968728008","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.37600943,0.0036599988,0.5314806,0.0007429328,0.0010519667,0.0131963305,0.039081596,0.0048028366,0.029974211],"genre_scores_gemma":[0.26099268,0.0026628766,0.593772,0.001298482,0.00057290366,0.03481095,0.07806815,0.0016777344,0.026144259],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9937908,0.0013912608,0.0006933395,0.0015402645,0.0022594489,0.00032493623],"domain_scores_gemma":[0.99784863,0.0005559286,0.00032881222,0.00054091465,0.00063684006,0.00008883498],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003579488,0.0010454844,0.0007339662,0.002313346,0.0012042932,0.0011120193,0.0010468385,0.0009832096,0.013314269],"category_scores_gemma":[0.003703968,0.000701013,0.0006700398,0.0015174362,0.0012831826,0.00053049764,0.00091795303,0.0010540185,0.0064161476],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014114776,0.00022580227,0.004966959,0.00033602226,0.00006290331,0.00018813177,0.00042553156,0.0003741233,0.9574412,0.0016259191,0.0026861022,0.030255862],"study_design_scores_gemma":[0.00031974117,0.0028514804,0.060195785,0.00035549453,0.0002965882,0.002279388,0.0003766008,0.005273227,0.8483489,0.0013514892,0.07822652,0.00012465245],"about_ca_topic_score_codex":0.0004113735,"about_ca_topic_score_gemma":0.0014475369,"teacher_disagreement_score":0.013314269,"about_ca_system_score_codex":0.00049918354,"about_ca_system_score_gemma":0.0007396899,"threshold_uncertainty_score":0.044540703},"labels":[],"label_agreement":null},{"id":"W2968995118","doi":"","title":"Abstract #4925: Unique role for the Rb LxCxE binding domain in lung development","year":2009,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Retinoblastoma protein; Ectopic expression; Retinoblastoma; Biology; Null allele; Carcinogenesis; Molecular biology; Genetics; Cell biology; Apoptosis; Allele; Cell cycle; Gene","score_opus":0.053637722253372586,"score_gpt":0.39395085293688753,"score_spread":0.34031313068351493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2968995118","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8996135,0.01265584,0.025369225,0.0021380573,0.00050904485,0.00019198413,0.008553954,0.001588514,0.049379777],"genre_scores_gemma":[0.9066244,0.0027627558,0.009501622,0.00046727713,0.00009314591,0.000109864755,0.0048898426,0.00020789857,0.07534329],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991775,0.000007028327,0.000006257816,0.000028021444,0.000025295767,0.000015755031],"domain_scores_gemma":[0.99994135,0.0000062626264,0.000009941831,0.000005698919,0.0000040426885,0.000032771226],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000087896806,0.0003104045,0.00019689812,0.00026124014,0.00027099307,0.00029659463,0.00034390404,0.00038276706,0.010440006],"category_scores_gemma":[0.00005041107,0.00012992274,0.00021634882,0.00012336411,0.00024132778,0.0001788541,0.00033706604,0.0006348968,0.004114657],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000784902,0.000017715549,0.00028366834,0.00003773731,0.000003338836,0.00027777292,0.000009354046,0.00004663163,0.9937662,0.00082815497,0.00048176732,0.0041691423],"study_design_scores_gemma":[0.000057406523,0.00025593909,0.018593874,0.000024258217,0.000028803226,0.0037440641,0.000041398318,0.00078653276,0.8999332,0.0003802637,0.07613569,0.000018635268],"about_ca_topic_score_codex":0.00078203756,"about_ca_topic_score_gemma":0.0012179306,"teacher_disagreement_score":0.010440006,"about_ca_system_score_codex":0.00035629884,"about_ca_system_score_gemma":0.00020463095,"threshold_uncertainty_score":0.034925282},"labels":[],"label_agreement":null},{"id":"W2969716024","doi":"10.11575/prism/36663","title":"Developing an in Vivo Reporter System for Murine CXCL1 Gene Expression, and Studying the Consequences of STING Activation on T Lymphocytes.","year":2019,"lang":"en","type":"dissertation","venue":"PRISM (University of Calgary)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Sting; In vivo; CXCL1; Gene expression; Reporter gene; Biology; Cell biology; Gene; Computational biology; Immunology; Molecular biology; Chemokine; Genetics; Immune system; Engineering","score_opus":0.022911073848915955,"score_gpt":0.2416541813680166,"score_spread":0.21874310751910064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2969716024","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5486038,0.01477517,0.40759137,0.0020717676,0.00069756084,0.0012286148,0.004212884,0.0012766388,0.01954214],"genre_scores_gemma":[0.6574095,0.013884115,0.2633248,0.00059866166,0.00015296163,0.0013198238,0.008863414,0.0003079716,0.05413888],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998118,0.00004024074,0.000015190614,0.00005148121,0.000037586768,0.000043793654],"domain_scores_gemma":[0.9999006,0.000018295266,0.000024168714,0.0000124497,0.00001525925,0.000029205685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005703568,0.00059127284,0.00019470339,0.00046569423,0.00020325811,0.0003220761,0.0003924789,0.0005597947,0.0024561186],"category_scores_gemma":[0.000117072406,0.00022027237,0.0004023036,0.00023451005,0.00026040061,0.0003332473,0.0003201786,0.0013266716,0.0011410231],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004099091,0.00004220326,0.000059793485,0.000049970524,0.000002859285,0.000026539348,0.000029245086,0.000076443124,0.9951997,0.0005825178,0.0001692609,0.0037204828],"study_design_scores_gemma":[0.000032434087,0.00033878122,0.0009376718,0.0000236889,0.000018458964,0.00029331207,0.000019443225,0.0006684923,0.9778633,0.0001533954,0.019644849,0.000006289193],"about_ca_topic_score_codex":0.0006346584,"about_ca_topic_score_gemma":0.0010791827,"teacher_disagreement_score":0.0024561186,"about_ca_system_score_codex":0.00059972017,"about_ca_system_score_gemma":0.00037949198,"threshold_uncertainty_score":0.00821656},"labels":[],"label_agreement":null},{"id":"W2972043980","doi":"10.1200/jco.2013.31.15_suppl.11110","title":"The role of Pirh2 C-terminal residues and ubiquitin lysine chains in ubiquitination mechanism.","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Oncology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Ubiquitin; Ubiquitin ligase; Lysine; Ubiquitin-conjugating enzyme; Ubiquitin-Protein Ligases; Cell biology; Mutant; Biology; Chemistry; Biochemistry; Amino acid; Gene","score_opus":0.035598041358222345,"score_gpt":0.37508881407023464,"score_spread":0.3394907727120123,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2972043980","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99299544,0.0022529734,0.002938183,0.000083545725,0.000023387476,0.000015946698,0.00037373314,0.000038730475,0.0012781093],"genre_scores_gemma":[0.99498534,0.00037937655,0.002352068,0.000033154673,0.000006905505,0.000011580304,0.00089370104,0.000009176514,0.0013286974],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999387,0.000008699716,0.000004596108,0.000019834282,0.000015797534,0.000012284489],"domain_scores_gemma":[0.9999075,0.000013622367,0.00002952545,0.000009437018,0.00000939769,0.00003050784],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011785973,0.00029008838,0.000121236415,0.00011636366,0.00012130198,0.00020684864,0.00024190996,0.00030637393,0.001493778],"category_scores_gemma":[0.00009950461,0.000079895624,0.00019567226,0.000104029255,0.00017736793,0.00027218496,0.00014635283,0.000238861,0.00060086016],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041281476,0.000037310467,0.0015819904,0.00009839564,0.000011119758,0.00019312245,0.000009255787,0.00020132045,0.9949763,0.0001837095,0.00006121948,0.0022335302],"study_design_scores_gemma":[0.000019761197,0.00019302261,0.009988783,0.0000075301627,0.000012738654,0.0009516186,0.000020411306,0.00182513,0.9841367,0.00010598495,0.0027313437,0.0000069943267],"about_ca_topic_score_codex":0.00023066017,"about_ca_topic_score_gemma":0.00019743826,"teacher_disagreement_score":0.001493778,"about_ca_system_score_codex":0.0002905329,"about_ca_system_score_gemma":0.000104568906,"threshold_uncertainty_score":0.004997194},"labels":[],"label_agreement":null},{"id":"W2972130743","doi":"10.1016/bs.mie.2019.07.002","title":"Methods to detect endogenous dsRNA induction and recognition","year":2019,"lang":"en","type":"article","venue":"Methods in enzymology on CD-ROM/Methods in enzymology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; Princess Margaret Cancer Centre","funders":"","keywords":"Innate immune system; RNA silencing; Endogeny; Signal transduction; Intracellular; Biology; Nucleic acid; Pattern recognition receptor; Cell biology; Interferon; Cell signaling; MDA5; Cell; Receptor; RNA; Biochemistry; RNA interference; Gene; Immunology","score_opus":0.07964875239739928,"score_gpt":0.4012032515272714,"score_spread":0.3215544991298721,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2972130743","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.023673333,0.0029029031,0.9560991,0.00032815183,0.0003864715,0.0015943958,0.0020960236,0.004955767,0.007963899],"genre_scores_gemma":[0.10093788,0.0056209117,0.80838424,0.00095848646,0.00018210459,0.010762087,0.01297267,0.002204936,0.057976827],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976185,0.00038903276,0.00024781545,0.00060694735,0.0008119267,0.00032581034],"domain_scores_gemma":[0.99811953,0.0005471734,0.00027333698,0.00057786633,0.00030937005,0.00017268337],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016382072,0.0030378914,0.0011999621,0.0031054914,0.0012345562,0.00090604543,0.0018510778,0.0015874449,0.012731929],"category_scores_gemma":[0.0015857975,0.0017218409,0.0012935231,0.0009610957,0.00093739445,0.0010232175,0.0012905415,0.0046051242,0.01304812],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010924519,0.00007685524,0.00014239579,0.00036092525,0.000020259813,0.000037212536,0.0000419157,0.000050201896,0.9805088,0.0009301232,0.00082853157,0.016893512],"study_design_scores_gemma":[0.00004325102,0.00014386118,0.0005139373,0.000033601187,0.000035805817,0.00025473424,0.000013476854,0.00056050974,0.9810099,0.0005782289,0.016789429,0.000023257642],"about_ca_topic_score_codex":0.00041227,"about_ca_topic_score_gemma":0.0010844438,"teacher_disagreement_score":0.012731929,"about_ca_system_score_codex":0.0007315981,"about_ca_system_score_gemma":0.0009717792,"threshold_uncertainty_score":0.042592585},"labels":[],"label_agreement":null},{"id":"W2972907287","doi":"10.1016/j.chom.2019.08.010","title":"The Nuclear Matrix Protein SAFA Surveils Viral RNA and Facilitates Immunity by Activating Antiviral Enhancers and Super-enhancers","year":2019,"lang":"en","type":"article","venue":"Cell Host & Microbe","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":86,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"National Key Research and Development Program of China Stem Cell and Translational Research; National Natural Science Foundation of China","keywords":"Biology; RNA silencing; Innate immune system; Enhancer; RNA; Cell biology; Chromatin; Transcription (linguistics); Vesicular stomatitis virus; Viral replication; Virology; Gene; Virus; Transcription factor; Genetics; RNA interference; Immune system","score_opus":0.0033920209195178234,"score_gpt":0.209140333067884,"score_spread":0.20574831214836617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2972907287","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9685157,0.0036054929,0.020279633,0.00034496817,0.00013913306,0.000025998272,0.00030087784,0.0004889956,0.006299159],"genre_scores_gemma":[0.9892587,0.00044936608,0.0062729954,0.00008998527,0.00005747507,0.000014032327,0.00037888717,0.00009939319,0.0033792846],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997228,0.000047757017,0.000012454409,0.000060618833,0.00008097251,0.00007534788],"domain_scores_gemma":[0.99941266,0.00017853072,0.0001232531,0.00007231387,0.00007540285,0.00013782083],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045732767,0.0005137334,0.00027842622,0.0004890686,0.00034104704,0.0005132339,0.00025572418,0.00030056536,0.0030455075],"category_scores_gemma":[0.0003685234,0.0003072526,0.00047961576,0.00012839191,0.00047209035,0.0005916424,0.0006861665,0.0009579627,0.0011033451],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009956486,0.000010143912,0.00036490444,0.000017540067,0.0000029285038,0.000039777828,0.00001849483,0.00004044607,0.99704367,0.0006672845,0.000068658184,0.0016265992],"study_design_scores_gemma":[0.000028452176,0.00020180376,0.006721348,0.000007501123,0.000010931779,0.00032804566,0.00006992653,0.0019540307,0.98539937,0.00054877193,0.004720723,0.000009135507],"about_ca_topic_score_codex":0.0002906609,"about_ca_topic_score_gemma":0.00075629266,"teacher_disagreement_score":0.0030455075,"about_ca_system_score_codex":0.00032069915,"about_ca_system_score_gemma":0.00020247376,"threshold_uncertainty_score":0.010188222},"labels":[],"label_agreement":null},{"id":"W2972945671","doi":"10.1101/766808","title":"Dynamic rewiring of the human interactome by interferon signalling","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Canada; Canadian Institutes of Health Research; Killam Trusts; Genome British Columbia; Northwestern University","keywords":"Interactome; Biology; Interferon; Protein–protein interaction; Proteome; STAT1; Computational biology; Transcriptome; Interaction network; Interferon-stimulated gene; Human proteome project; Cell biology; Proteomics; Gene; Genetics; Gene expression; Immune system; Innate immune system","score_opus":0.009923537892430724,"score_gpt":0.22905165841443037,"score_spread":0.21912812052199965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2972945671","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97734094,0.0019451875,0.0137535585,0.0002974129,0.000017588149,0.000011454535,0.0028777479,0.00036691898,0.003389251],"genre_scores_gemma":[0.9864547,0.0008524235,0.007430986,0.0000830423,0.000023063662,0.000025307107,0.0036984482,0.000058485195,0.0013734627],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983835,0.000027572774,0.0000073579695,0.00006239642,0.000039551964,0.000024693953],"domain_scores_gemma":[0.9998305,0.000055517423,0.000046202655,0.000027013173,0.000019613952,0.00002105169],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013912558,0.00018691369,0.00028341793,0.00079494057,0.00023760015,0.00054720277,0.0001367664,0.00020560474,0.0014943506],"category_scores_gemma":[0.0002938801,0.00013517374,0.0002586103,0.00074596185,0.00026562432,0.00036826948,0.00036200928,0.0002285119,0.00040529761],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00077726017,0.000044225344,0.036360137,0.00026658986,0.00017699774,0.00076907413,0.00037162163,0.00591754,0.9105262,0.0050850855,0.0029633474,0.036741856],"study_design_scores_gemma":[0.000041102707,0.0001675562,0.5044335,0.000103633596,0.00029250872,0.0029336931,0.00091443287,0.12753242,0.28971687,0.025508784,0.048283324,0.00007216337],"about_ca_topic_score_codex":0.00066598854,"about_ca_topic_score_gemma":0.000902423,"teacher_disagreement_score":0.0014943506,"about_ca_system_score_codex":0.0003264501,"about_ca_system_score_gemma":0.00014316714,"threshold_uncertainty_score":0.004999101},"labels":[],"label_agreement":null},{"id":"W2973370767","doi":"10.1371/journal.pbio.3000451","title":"NLRX1 inhibits the early stages of CNS inflammation and prevents the onset of spontaneous autoimmunity","year":2019,"lang":"en","type":"article","venue":"PLoS Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Université de Sherbrooke","funders":"National Institute of Neurological Disorders and Stroke; Multiple Sclerosis Society of Canada; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Multiple Sclerosis Society; Michael Smith Health Research BC","keywords":"Biology; Experimental autoimmune encephalomyelitis; Autoimmunity; Inflammation; Immunology; Innate immune system; Adoptive cell transfer; Multiple sclerosis; Immune system; Myelin; Encephalomyelitis; Central nervous system; Cell biology; T cell; Neuroscience","score_opus":0.011544388124598275,"score_gpt":0.23064302601687517,"score_spread":0.2190986378922769,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2973370767","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948991,0.0016136442,0.0023110725,0.00015742525,0.000037124926,0.000019372843,0.000112404974,0.00010664315,0.00074324314],"genre_scores_gemma":[0.9945167,0.0010091985,0.0017456497,0.00006040832,0.000031935175,0.000027699389,0.00021925809,0.000024061766,0.002365087],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983835,0.000040530438,0.00002242891,0.00002705652,0.00003703662,0.00003456515],"domain_scores_gemma":[0.9998685,0.000023991737,0.00004584813,0.000018006358,0.000011665995,0.000031932548],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001647739,0.0003408049,0.00029203945,0.00018350127,0.00009323471,0.00019198828,0.00023203062,0.00030014725,0.0007030948],"category_scores_gemma":[0.00015961076,0.00007052605,0.00018052477,0.00007487278,0.00022966236,0.00017571743,0.00011969841,0.0007622717,0.00019085921],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035570032,0.00012812518,0.00018502426,0.000037645135,0.000006885725,0.000050916093,0.00001482916,0.000093911156,0.99646497,0.0001340982,0.000055556215,0.002472338],"study_design_scores_gemma":[0.000092130926,0.0015972081,0.0024394765,0.00001059782,0.00002057584,0.00031236492,0.000022674669,0.000694756,0.9930107,0.000119920514,0.0016755583,0.0000039627794],"about_ca_topic_score_codex":0.00015820071,"about_ca_topic_score_gemma":0.0003021009,"teacher_disagreement_score":0.0007030948,"about_ca_system_score_codex":0.00011395948,"about_ca_system_score_gemma":0.0001914868,"threshold_uncertainty_score":0.0023521185},"labels":[],"label_agreement":null},{"id":"W2973790303","doi":"","title":"Common variation near IRF6 is associated with IFN-β-induced liver injury in multiple sclerosis","year":2018,"lang":"en","type":"article","venue":"PMC","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; London Health Sciences Centre; Western University; University of Manitoba; Université de Montréal; University of Alberta; University of British Columbia","funders":"","keywords":"Multiple sclerosis; Liver injury; Medicine; Odds ratio; IRF1; Liver disease; Immunology; Internal medicine; Biology; Gene; Genetics; Gene expression","score_opus":0.035692745916851114,"score_gpt":0.24339926077448465,"score_spread":0.20770651485763353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2973790303","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983742,0.00020443929,0.0006728069,0.000057269495,0.00002203485,0.000005564146,0.00030497875,0.00001947007,0.00033913474],"genre_scores_gemma":[0.9988483,0.00004635167,0.00038664482,0.00004394678,0.000017232192,0.000004559105,0.00024947294,0.00001894157,0.00038445654],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992675,0.00018196284,0.00011190602,0.000257118,0.00009483565,0.000086716405],"domain_scores_gemma":[0.99885356,0.00033122604,0.00045575865,0.00011008658,0.00008850776,0.0001608734],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004055618,0.0005068139,0.00053750916,0.0012315424,0.0005483559,0.0004777081,0.0004670368,0.0008812874,0.0052004694],"category_scores_gemma":[0.001036658,0.00022625849,0.0010490032,0.0009882903,0.00036248882,0.00022597995,0.0004386034,0.00082413974,0.00062165613],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0075377594,0.0003571032,0.33984575,0.00024588653,0.0019362704,0.007143819,0.00103736,0.0006480908,0.62021315,0.00094234705,0.0008666225,0.019225813],"study_design_scores_gemma":[0.00011382683,0.0005766134,0.97317547,0.00006784489,0.0005030952,0.009831976,0.00033309948,0.001244624,0.011725678,0.0007759566,0.0016058106,0.000046081386],"about_ca_topic_score_codex":0.0009465926,"about_ca_topic_score_gemma":0.0011481899,"teacher_disagreement_score":0.0052004694,"about_ca_system_score_codex":0.00016082237,"about_ca_system_score_gemma":0.00012049086,"threshold_uncertainty_score":0.017397344},"labels":[],"label_agreement":null},{"id":"W2977707523","doi":"10.1038/s41598-019-50656-5","title":"Stimulator of interferon genes (STING) activation exacerbates experimental colitis in mice","year":2019,"lang":"en","type":"article","venue":"Scientific Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":102,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Bone and Joint Health Institute; University of Calgary","funders":"CIHR Skin Research Training Centre; Canadian Institutes of Health Research; Crohn's and Colitis Foundation of Canada; Government of Canada; Crohn's and Colitis Foundation","keywords":"Sting; Stimulator of interferon genes; Colitis; Agonist; Interferon; Cytokine; Stimulation; Proinflammatory cytokine; Downregulation and upregulation; Innate immune system; Biology; Inflammation; Immunology; Immune system; Receptor; Gene; Endocrinology; Biochemistry","score_opus":0.012402925879963285,"score_gpt":0.2566720522724385,"score_spread":0.24426912639247522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2977707523","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962478,0.00096582156,0.000624122,0.00020468848,0.000049943927,0.000055510533,0.0006274228,0.00016899906,0.0010557302],"genre_scores_gemma":[0.9925736,0.0010114665,0.0017070102,0.00023435861,0.000046566653,0.00012284367,0.00080402626,0.00006291557,0.0034370762],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99953985,0.00008743402,0.000052718973,0.00009946159,0.000077918274,0.00014272048],"domain_scores_gemma":[0.9992016,0.00004301021,0.00031603585,0.000055721277,0.000031349166,0.00035237358],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033030793,0.0010375318,0.00068231265,0.0010909406,0.0002704967,0.00042591098,0.000251981,0.00083316397,0.0023509145],"category_scores_gemma":[0.00020185133,0.0005154924,0.0005840902,0.000424199,0.00050065527,0.000418478,0.00035885084,0.0018831186,0.00063935044],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018891564,0.0005515946,0.0012669341,0.00008802073,0.00001661997,0.0002477052,0.000041527644,0.0000693067,0.9941883,0.00008781756,0.00013668039,0.0014162554],"study_design_scores_gemma":[0.0006724337,0.017888997,0.09035391,0.00017668636,0.00019240053,0.0038415685,0.00034068912,0.0027482403,0.8775754,0.0003282551,0.005836982,0.000044361557],"about_ca_topic_score_codex":0.00027905952,"about_ca_topic_score_gemma":0.0006312519,"teacher_disagreement_score":0.0023509145,"about_ca_system_score_codex":0.00039112868,"about_ca_system_score_gemma":0.000277441,"threshold_uncertainty_score":0.007864654},"labels":[],"label_agreement":null},{"id":"W2979846008","doi":"10.1038/d41586-019-02974-x","title":"Bacterial twist to an antiviral defence","year":2019,"lang":"en","type":"letter","venue":"Nature","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Defence mechanisms; Key (lock); Virology; Computational biology; Genetics; Ecology","score_opus":0.008357767390870689,"score_gpt":0.2575276718953106,"score_spread":0.24916990450443993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2979846008","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00046874175,0.004927364,0.00018234135,0.9197189,0.06928385,0.00000977134,0.000029053392,0.000030563508,0.0053494116],"genre_scores_gemma":[0.013593619,0.0036269063,0.00022589504,0.8450571,0.11964561,0.000043946544,0.00002459223,0.00002625645,0.017756121],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998235,0.0005115416,0.00011938012,0.00020725904,0.00061085937,0.00031598378],"domain_scores_gemma":[0.9960224,0.0023574585,0.00021545369,0.00020647253,0.00050501246,0.0006932026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022243,0.000746947,0.00085340143,0.0004947539,0.0033206758,0.0053721988,0.0010924174,0.040441442,0.007420154],"category_scores_gemma":[0.013009496,0.00063348067,0.0007131012,0.000313139,0.0045494726,0.0034364755,0.0021401728,0.03871327,0.005161545],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012565614,0.000024820776,0.0001614502,0.00006560417,0.000016690457,0.0012138833,0.000083638646,0.00006961996,0.0003748671,0.0112871975,0.9766217,0.0099548055],"study_design_scores_gemma":[0.0001927614,0.000067183944,0.000494616,0.0001868748,0.000023742812,0.00132536,0.00022636318,0.0005374397,0.00058301573,0.048637573,0.9476716,0.00005353909],"about_ca_topic_score_codex":0.0015746962,"about_ca_topic_score_gemma":0.0029945169,"teacher_disagreement_score":0.040441442,"about_ca_system_score_codex":0.0035233798,"about_ca_system_score_gemma":0.0020015342,"threshold_uncertainty_score":0.025564015},"labels":[],"label_agreement":null},{"id":"W2980199248","doi":"","title":"How to end a viral RNA - lessons from the IFIT proteins","year":2018,"lang":"en","type":"article","venue":"Acta Biochimica Polonica","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"RNA; Virology; Chemistry; Computational biology; Biology; Genetics; Gene","score_opus":0.020132397398079337,"score_gpt":0.2689924588277233,"score_spread":0.24886006142964398,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2980199248","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.121478185,0.36801323,0.15809482,0.25379613,0.024410173,0.000097622506,0.00069900125,0.0011062623,0.072304495],"genre_scores_gemma":[0.6344922,0.17885323,0.07978759,0.028285952,0.0070888703,0.00016185614,0.00063989154,0.0007535977,0.069936804],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996872,0.000068329195,0.000020738002,0.000066214554,0.00008718826,0.00007034072],"domain_scores_gemma":[0.9992685,0.0003035415,0.00006152973,0.00014353772,0.00011661602,0.00010621747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015324266,0.0005462494,0.0008205586,0.0003176662,0.00089121383,0.0022267269,0.00054471404,0.002639415,0.004176352],"category_scores_gemma":[0.0021302984,0.00026979228,0.0006641836,0.00025115974,0.0032773195,0.006892307,0.0009883619,0.0059027863,0.0025102943],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00068187085,0.00014595749,0.0019281966,0.00147367,0.00015052225,0.0018310129,0.0013930595,0.0035272064,0.28979906,0.35575503,0.051969793,0.29134464],"study_design_scores_gemma":[0.000073457966,0.0003357541,0.0013350218,0.00045509049,0.00006199169,0.002424083,0.001609494,0.002888636,0.10671863,0.4847864,0.39918962,0.00012175201],"about_ca_topic_score_codex":0.00054276333,"about_ca_topic_score_gemma":0.0007148931,"teacher_disagreement_score":0.004176352,"about_ca_system_score_codex":0.00078616437,"about_ca_system_score_gemma":0.0007600721,"threshold_uncertainty_score":0.013971269},"labels":[],"label_agreement":null},{"id":"W2980523680","doi":"10.1161/res.125.suppl_1.485","title":"Abstract 485: STING(ing) the Heart: How DNA Damage and Inflammation Orchestrate Cardiac Remodeling and Heart Failure","year":2019,"lang":"en","type":"article","venue":"Circulation Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Heart Institute; Montreal Heart Institute","funders":"","keywords":"Immunostaining; Heart failure; Inflammation; Senescence; DNA damage; Medicine; Downregulation and upregulation; Internal medicine; Pathology; Biology; Cardiology; Immunohistochemistry; DNA","score_opus":0.04505168648779168,"score_gpt":0.31353542698331116,"score_spread":0.2684837404955195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2980523680","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95590574,0.027551848,0.007149502,0.0011128521,0.00027608313,0.00009716193,0.0015978091,0.00024053956,0.0060684322],"genre_scores_gemma":[0.9658778,0.01322595,0.0033819545,0.0003711599,0.00018850015,0.00006554642,0.0015443596,0.00003440627,0.0153103825],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999397,0.000009593109,0.0000060277666,0.000018289544,0.0000135848195,0.000012779708],"domain_scores_gemma":[0.9999471,0.0000045429288,0.000022025113,0.000004365198,0.000005694877,0.000016284033],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014814963,0.0004590717,0.00021654241,0.0002228122,0.00014378593,0.00026470434,0.00017297156,0.00039522786,0.0049621556],"category_scores_gemma":[0.000048995844,0.00009258326,0.0002214111,0.00015425774,0.00021985777,0.000277649,0.00018670368,0.0006470149,0.00069299724],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029411245,0.00006215768,0.00052239554,0.00020248088,0.00001073742,0.000113484464,0.000019062294,0.000050278482,0.9923728,0.00016565503,0.00029039333,0.0058963327],"study_design_scores_gemma":[0.00006209354,0.0032352204,0.04092886,0.00013109173,0.00013417745,0.0021511225,0.000103365106,0.00075861206,0.93622386,0.00037267405,0.015885413,0.000013480444],"about_ca_topic_score_codex":0.00018785849,"about_ca_topic_score_gemma":0.0003451382,"teacher_disagreement_score":0.0049621556,"about_ca_system_score_codex":0.00018397743,"about_ca_system_score_gemma":0.00012795522,"threshold_uncertainty_score":0.016600013},"labels":[],"label_agreement":null},{"id":"W2980658722","doi":"10.1016/j.fsi.2019.10.032","title":"Evolution of IFN subgroups in bony fish - 1:Group I-III IFN exist in early ray-finned fish, with group II IFN subgroups present in the Holostean spotted gar, Lepisosteus oculatus","year":2019,"lang":"en","type":"article","venue":"Fish & Shellfish Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Academy of Medical Sciences; Associated Medical Services","keywords":"Biology; Fish <Actinopterygii>; Zoology; Gene; Group (periodic table); Fishery; Genetics","score_opus":0.007392617759700794,"score_gpt":0.20940936010816366,"score_spread":0.20201674234846287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2980658722","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986576,0.0001351084,0.0002261596,0.000025375371,0.0000025071956,0.0000029971736,0.00010752127,0.000005037842,0.00083758216],"genre_scores_gemma":[0.996879,0.00012003823,0.00062362704,0.00004779438,0.0000039602096,0.000012845637,0.0003197605,0.000012941177,0.0019802297],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998927,0.0000125474135,0.0000055852393,0.00004164791,0.000018887937,0.000028681543],"domain_scores_gemma":[0.9998165,0.00003607934,0.00005615574,0.000014683941,0.000036529775,0.00004013419],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017662569,0.00022701436,0.00020242433,0.0007432895,0.00042057742,0.00045396524,0.00022393845,0.00042691277,0.0018961907],"category_scores_gemma":[0.00026116392,0.0001773177,0.0002714601,0.00026183383,0.00035516426,0.00031646647,0.00049922924,0.0005605951,0.00048605775],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007495886,0.000018078492,0.08771611,0.000036942078,0.000022843682,0.00007711464,0.00044873735,0.0001399197,0.90370077,0.00042404278,0.000054312368,0.0066115046],"study_design_scores_gemma":[0.000021684036,0.0003200205,0.9612775,0.000031526808,0.00004722662,0.0005368853,0.0007770601,0.00091047195,0.032943536,0.00046650937,0.0026498975,0.000017695902],"about_ca_topic_score_codex":0.0017698237,"about_ca_topic_score_gemma":0.0036467472,"teacher_disagreement_score":0.0018961907,"about_ca_system_score_codex":0.00060895196,"about_ca_system_score_gemma":0.00024978086,"threshold_uncertainty_score":0.0063434243},"labels":[],"label_agreement":null},{"id":"W2981364823","doi":"10.1016/j.jtho.2019.08.1461","title":"P2.03-14 Developing an Immunogenic Model of Non Small Cell Lung Cancer","year":2019,"lang":"en","type":"article","venue":"Journal of Thoracic Oncology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"KRAS; Lung cancer; Carcinogenesis; Adenocarcinoma; Cancer research; Medicine; Immunohistochemistry; Oncogene; Lung; Cancer; Biology; Pathology; Cell cycle; Internal medicine; Colorectal cancer","score_opus":0.02428298648711889,"score_gpt":0.3670972754689424,"score_spread":0.3428142889818235,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2981364823","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97124344,0.00079985603,0.010632508,0.0012296906,0.0005526043,0.0008632553,0.0020458368,0.00025705175,0.012375725],"genre_scores_gemma":[0.9603933,0.0008296285,0.010868362,0.00066031213,0.00012758693,0.001064771,0.00221776,0.0001880405,0.023650298],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992336,0.00020769126,0.000047936428,0.0001192318,0.00019047484,0.0002011374],"domain_scores_gemma":[0.9995678,0.000100263605,0.000062723855,0.00009082343,0.00005242724,0.00012598443],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008287387,0.0006411994,0.00044708012,0.0010328133,0.00067789416,0.0009306764,0.0008381547,0.0014149642,0.0051312353],"category_scores_gemma":[0.00039371554,0.00031120094,0.0008484833,0.0003641319,0.00070326537,0.0006784468,0.00051239145,0.0033283734,0.001736007],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013923697,0.0022940252,0.00046389757,0.00007951461,0.000018965215,0.00042033393,0.0001017673,0.0006997507,0.98323524,0.0054733804,0.0010677023,0.0047531133],"study_design_scores_gemma":[0.0012014313,0.009345948,0.0043989616,0.000072680945,0.00008449473,0.0019254733,0.00025834856,0.011051312,0.94311064,0.0030178959,0.02549133,0.000041428233],"about_ca_topic_score_codex":0.00085033645,"about_ca_topic_score_gemma":0.00093640375,"teacher_disagreement_score":0.0051312353,"about_ca_system_score_codex":0.0007791797,"about_ca_system_score_gemma":0.0007568827,"threshold_uncertainty_score":0.01716572},"labels":[],"label_agreement":null},{"id":"W2981888762","doi":"10.1016/j.smim.2019.101327","title":"Introduction to special issue on interferons","year":2019,"lang":"en","type":"editorial","venue":"Seminars in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University Health Network; University of Toronto","funders":"","keywords":"Computational biology; Computer science; Virology; Medicine; Biology","score_opus":0.004741630922377997,"score_gpt":0.25260165427645176,"score_spread":0.24786002335407376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2981888762","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000017715349,0.0046348204,0.000073732066,0.01717234,0.97693956,0.000012279751,0.000025497578,0.00002455017,0.001099515],"genre_scores_gemma":[0.0002153305,0.0022519897,0.000059703943,0.012046448,0.9774259,0.000020268022,0.00002627015,0.00003103056,0.007923161],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99512535,0.0010650238,0.0006416148,0.000742427,0.0019588673,0.00046666985],"domain_scores_gemma":[0.9863535,0.004624255,0.0013730574,0.00043821937,0.0041906503,0.003020425],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0068497243,0.005846911,0.0050443755,0.0061534904,0.0034663838,0.008529841,0.0034929414,0.016719278,0.030138474],"category_scores_gemma":[0.016085327,0.0015213976,0.0033974228,0.0016223945,0.0024634404,0.004537473,0.00339663,0.019593822,0.016973825],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006196273,0.000012893794,0.000021271087,0.00018860018,0.000019327692,0.000113717855,0.000008208701,0.000020078922,0.00009086893,0.00024853947,0.9941425,0.0050721425],"study_design_scores_gemma":[0.00010714982,0.0000417637,0.00030083774,0.00037903612,0.000075606185,0.0002622462,0.000021254558,0.00012943866,0.0001384571,0.0012992527,0.9972217,0.000023220027],"about_ca_topic_score_codex":0.0011369713,"about_ca_topic_score_gemma":0.0035411287,"teacher_disagreement_score":0.030138474,"about_ca_system_score_codex":0.00433657,"about_ca_system_score_gemma":0.002883804,"threshold_uncertainty_score":0.10082322},"labels":[],"label_agreement":null},{"id":"W2982470997","doi":"10.1101/824094","title":"Chemotherapy induced immunogenic cell death alters response to exogenous activation of STING pathway and PD-L1 immune checkpoint blockade in a syngeneic murine model of ovarian cancer","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University; Kingston Health Sciences Centre; Dalhousie University","funders":"","keywords":"Carboplatin; Immunogenic cell death; Doxorubicin; Cancer research; Agonist; Sting; Immune checkpoint; Medicine; Stimulator of interferon genes; Pharmacology; Chemotherapy; Immune system; Immunotherapy; Immunology; Internal medicine; Receptor; Innate immune system; Cisplatin","score_opus":0.019116887853875372,"score_gpt":0.23232998092280652,"score_spread":0.21321309306893116,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2982470997","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961731,0.0006468638,0.0010746848,0.00011258874,0.000057227386,0.00008082131,0.00086594326,0.00006947898,0.00091931084],"genre_scores_gemma":[0.9928877,0.00053460477,0.0017034028,0.000074348805,0.000018868064,0.00014036773,0.0008350444,0.0000234908,0.0037822977],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997085,0.000038814447,0.000033354907,0.00007104275,0.00006460391,0.00008362703],"domain_scores_gemma":[0.9996247,0.00005412674,0.00013042983,0.000052639098,0.000022831922,0.00011513807],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002471499,0.00053471245,0.00029343017,0.00072751223,0.00016563699,0.00034481162,0.00025484068,0.0005681344,0.0016155211],"category_scores_gemma":[0.00010576518,0.00026353815,0.00039977313,0.00023288392,0.00040379708,0.000285938,0.000187188,0.0015356264,0.0003581605],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005239,0.00030501993,0.00021956442,0.000036426936,0.000004619507,0.00005455751,0.000025861204,0.00012358853,0.998055,0.000110774425,0.000036996167,0.0005037484],"study_design_scores_gemma":[0.00009589676,0.0042059105,0.003537775,0.000011517628,0.000021606389,0.00020039143,0.00004965606,0.0012890383,0.9892888,0.00006798094,0.0012237884,0.0000076867345],"about_ca_topic_score_codex":0.0005557005,"about_ca_topic_score_gemma":0.0007809261,"teacher_disagreement_score":0.0016155211,"about_ca_system_score_codex":0.00042188365,"about_ca_system_score_gemma":0.00024909686,"threshold_uncertainty_score":0.0054044724},"labels":[],"label_agreement":null},{"id":"W2989671497","doi":"10.1128/iai.00845-19","title":"ZBTB7B (ThPOK) Is Required for Pathogenesis of Cerebral Malaria and Protection against Pulmonary Tuberculosis","year":2019,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"Canadian Institutes of Health Research; Government of Canada","keywords":"Plasmodium berghei; Cerebral Malaria; Biology; Malaria; Tuberculosis; Mutation; Pathogenesis; Virology; Chloroquine; Immunology; Genetics; Gene; Plasmodium falciparum; Pathology; Medicine","score_opus":0.015884410942201384,"score_gpt":0.23792003330569828,"score_spread":0.2220356223634969,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2989671497","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964239,0.00076318317,0.0012444616,0.000083664934,0.000011422589,0.000015803618,0.0008413662,0.00006739208,0.0005487867],"genre_scores_gemma":[0.99689806,0.00034026796,0.0011093632,0.000040144016,0.0000031630689,0.000013703928,0.0008009719,0.00001643816,0.00077785447],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998853,0.000016730264,0.000008037731,0.000026384685,0.00004029385,0.000023234361],"domain_scores_gemma":[0.9998418,0.000025873062,0.00006046478,0.000009858703,0.000010039382,0.000051955954],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009108381,0.00028342765,0.00027261427,0.00043870712,0.00021186941,0.00021963213,0.00020396612,0.00033534633,0.001674597],"category_scores_gemma":[0.00011246358,0.00017108979,0.00019738874,0.000282076,0.0003387331,0.0000845245,0.00022154793,0.00043430497,0.0004017448],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014799333,0.000011071272,0.0010799357,0.000022741595,0.00000961047,0.00010990779,0.000008130284,0.00003539639,0.9979087,0.000034748064,0.0000291047,0.00060261734],"study_design_scores_gemma":[0.00011324953,0.00047245822,0.1422795,0.0000251294,0.00011167967,0.0023973773,0.00014871074,0.0015522119,0.84813774,0.00015393007,0.0045930455,0.000014958927],"about_ca_topic_score_codex":0.0010006555,"about_ca_topic_score_gemma":0.0018296517,"teacher_disagreement_score":0.001674597,"about_ca_system_score_codex":0.00022332989,"about_ca_system_score_gemma":0.00016609294,"threshold_uncertainty_score":0.0056020617},"labels":[],"label_agreement":null},{"id":"W2990332431","doi":"10.1126/scisignal.aav7934","title":"PKR-dependent cytosolic cGAS foci are necessary for intracellular DNA sensing","year":2019,"lang":"en","type":"article","venue":"Science Signaling","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research; National Natural Science Foundation of China","keywords":"Cytosol; Intracellular; Cell biology; DNA; Protein kinase R; DNA damage; Chemistry; Biology; Kinase; Biochemistry; Enzyme; Protein kinase A","score_opus":0.014823259890369238,"score_gpt":0.2537211828612827,"score_spread":0.23889792297091347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2990332431","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9897899,0.0021080964,0.005109416,0.00021651635,0.00005097285,0.000032101118,0.00049002515,0.00026719124,0.0019358251],"genre_scores_gemma":[0.99677604,0.00021353275,0.0014036666,0.000028943887,0.0000073041597,0.000017488348,0.0003277769,0.000022693348,0.0012026055],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981385,0.00003821551,0.000014076341,0.000046399087,0.000041591236,0.000045867007],"domain_scores_gemma":[0.9998272,0.00003364915,0.000042455056,0.000037157308,0.000015431953,0.000044266424],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015200085,0.0002766238,0.00023873601,0.00016313803,0.00014582406,0.0002752749,0.00012851098,0.000287007,0.0019785895],"category_scores_gemma":[0.00019865055,0.00012814387,0.00023789731,0.00009222569,0.00031062233,0.00021651019,0.00024676093,0.00050728273,0.0007840654],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000066927016,0.0000055664877,0.00007492575,0.000014199879,0.0000013313706,0.0000470907,0.0000062014265,0.0000106787265,0.99938715,0.00007710345,0.000017794968,0.0002910778],"study_design_scores_gemma":[0.0000127519315,0.0000695666,0.0032193528,0.0000032629207,0.000003659976,0.00035351366,0.000015203636,0.00028009128,0.99505424,0.00007535334,0.0009107166,0.0000021633086],"about_ca_topic_score_codex":0.00034053292,"about_ca_topic_score_gemma":0.00030052208,"teacher_disagreement_score":0.0019785895,"about_ca_system_score_codex":0.0004082931,"about_ca_system_score_gemma":0.00019324449,"threshold_uncertainty_score":0.0066189766},"labels":[],"label_agreement":null},{"id":"W2991458880","doi":"10.1016/j.jmb.2019.11.016","title":"Nucleic Acid Sensors and Programmed Cell Death","year":2019,"lang":"en","type":"review","venue":"Journal of Molecular Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":82,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Vlaamse regering; Medical Research Council Canada; Wellcome Trust","keywords":"Nucleic acid; Pyroptosis; AIM2; Innate immune system; Programmed cell death; Necroptosis; Biology; RNA; DNA; Cell biology; Immune system; Biochemistry; Apoptosis; Immunology; Gene","score_opus":0.02794486541298862,"score_gpt":0.3193603920433651,"score_spread":0.29141552663037645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2991458880","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012218562,0.9971722,0.00016867372,0.00022294573,0.00040623685,0.0000040925356,0.00000908549,0.000008715277,0.0018859933],"genre_scores_gemma":[0.0011792575,0.9960679,0.00023724485,0.00022667056,0.00038818462,0.000009229695,0.000029286484,0.000001908759,0.001860313],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99985015,0.00002396511,0.000016776517,0.00002839161,0.00006058656,0.000020157066],"domain_scores_gemma":[0.99989307,0.000039258444,0.000016838887,0.0000046844884,0.000027055756,0.000019069572],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003033882,0.0008649852,0.00092618354,0.0017776401,0.00033734267,0.00094860233,0.0007100993,0.001083099,0.0029359316],"category_scores_gemma":[0.0002670481,0.00022777906,0.00027467823,0.001685818,0.00061990693,0.0013783231,0.00068782596,0.0015989671,0.0030342254],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007242557,0.000075521195,0.00017314049,0.010071059,0.000041029358,0.00034899707,0.00011436098,0.0003720882,0.006554082,0.015129348,0.034811817,0.9322362],"study_design_scores_gemma":[0.0000059908816,0.00004105304,0.00042097527,0.0009891392,0.00001476695,0.0010054908,0.000041625193,0.00004974368,0.0007123704,0.0041531576,0.9925553,0.000010298204],"about_ca_topic_score_codex":0.0004442978,"about_ca_topic_score_gemma":0.00062955363,"teacher_disagreement_score":0.0029359316,"about_ca_system_score_codex":0.000764845,"about_ca_system_score_gemma":0.00076914637,"threshold_uncertainty_score":0.009821713},"labels":[],"label_agreement":null},{"id":"W2991810018","doi":"10.1128/jvi.01847-19","title":"β-Catenin Is Required for the cGAS/STING Signaling Pathway but Antagonized by the Herpes Simplex Virus 1 US3 Protein","year":2019,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Natural Science Foundation of China","keywords":"Biology; Innate immune system; Sting; Herpes simplex virus; Immunity; Virology; Cell biology; Virus; Signal transduction; Immune system; Interferon; DNA virus; Immunology; Gene; Genetics","score_opus":0.020484525580105824,"score_gpt":0.26037751360998723,"score_spread":0.2398929880298814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2991810018","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966143,0.000879662,0.0012166617,0.0000888966,0.000017023249,0.00000933826,0.00013970988,0.000046495607,0.0009880114],"genre_scores_gemma":[0.9982528,0.00019131559,0.0004598641,0.000016410562,0.0000027420822,0.000008087809,0.0001832443,0.000009150994,0.0008764815],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984777,0.000025323006,0.000015566231,0.000024851175,0.000043989283,0.00004244945],"domain_scores_gemma":[0.9998354,0.000025605555,0.00005975016,0.000014569084,0.000010268448,0.000054519896],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012628033,0.00036381494,0.00023538817,0.0002556742,0.00022020371,0.00037900754,0.00020072628,0.00024242069,0.0013927706],"category_scores_gemma":[0.00015370596,0.0001795509,0.00023183049,0.00011673086,0.0003980592,0.00024470504,0.00025416102,0.00047201503,0.00034507486],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046082856,0.000005733154,0.00015125904,0.000007716047,0.0000013648067,0.000058467744,0.000005807942,0.000022623874,0.99934775,0.00011380681,0.000008217904,0.00023123142],"study_design_scores_gemma":[0.000013976412,0.000059264887,0.006737081,0.000006580862,0.0000066641846,0.00046713836,0.000037600166,0.0012180891,0.99002725,0.00013520235,0.0012869139,0.000004312716],"about_ca_topic_score_codex":0.0011444592,"about_ca_topic_score_gemma":0.0017577785,"teacher_disagreement_score":0.0013927706,"about_ca_system_score_codex":0.00048745598,"about_ca_system_score_gemma":0.00038701412,"threshold_uncertainty_score":0.004659295},"labels":[],"label_agreement":null},{"id":"W2992987883","doi":"","title":"Preparation, characterization and preliminary application of polyclonal antibodies against mouse TRIM59.","year":2009,"lang":"en","type":"article","venue":"Journal of Northwest A&F University","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Polyclonal antibodies; Biology; Molecular biology; Antiserum; Recombinant DNA; Titer; Fusion protein; Antibody; lac operon; Western blot; Gene; Biochemistry; Genetics","score_opus":0.005154177871811714,"score_gpt":0.21873203841103875,"score_spread":0.21357786053922703,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2992987883","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.67589414,0.040294405,0.2324041,0.0030357477,0.0018362623,0.0043779435,0.012653948,0.0019151781,0.027588313],"genre_scores_gemma":[0.51370955,0.025851414,0.3262499,0.0023277048,0.0008751677,0.00437514,0.08268659,0.0006037155,0.043320846],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993794,0.00009680728,0.00008230529,0.00014651266,0.00016282561,0.00013203964],"domain_scores_gemma":[0.9994281,0.00009808031,0.00005349001,0.0000741933,0.00024818897,0.00009794441],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010428996,0.0010792351,0.0006498642,0.0011882671,0.0006235933,0.00037933353,0.0010265338,0.0008352992,0.0059229694],"category_scores_gemma":[0.000843489,0.0006912885,0.0011255227,0.00064707256,0.0002122975,0.00048191287,0.00047368158,0.0017128241,0.0048045563],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009084379,0.000072079485,0.00025594153,0.00022616592,0.00002146662,0.00009136604,0.000047399313,0.00003652727,0.9931038,0.0001322179,0.000643366,0.0052788523],"study_design_scores_gemma":[0.00017036589,0.0010376273,0.014851693,0.000110653964,0.00026851488,0.0023360536,0.00012025884,0.0017167336,0.90024906,0.0003940249,0.07868901,0.000056014487],"about_ca_topic_score_codex":0.0008442191,"about_ca_topic_score_gemma":0.0018225082,"teacher_disagreement_score":0.0059229694,"about_ca_system_score_codex":0.00051949,"about_ca_system_score_gemma":0.00032440957,"threshold_uncertainty_score":0.019814312},"labels":[],"label_agreement":null},{"id":"W2993314609","doi":"10.1111/imm.13163","title":"The IFITM protein family in adaptive immunity","year":2019,"lang":"en","type":"review","venue":"Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":160,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Medical Research Council Canada","keywords":"Immunity; Acquired immune system; Biology; Immunology; Immune system","score_opus":0.06352361160828227,"score_gpt":0.31825966904391656,"score_spread":0.2547360574356343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2993314609","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009348065,0.99662375,0.00016482819,0.00049707014,0.00084224384,0.000003847681,0.000016608712,0.000011065708,0.0017472082],"genre_scores_gemma":[0.0010574574,0.99491066,0.00027509523,0.00045587283,0.0011295072,0.000009061402,0.000061192215,0.0000034262646,0.0020977699],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998555,0.000024106119,0.000020191113,0.000026881857,0.00005252036,0.000020736925],"domain_scores_gemma":[0.9997651,0.00008464706,0.000034735735,0.000007985623,0.00007073375,0.000036913385],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047327898,0.0008874214,0.00088818825,0.0016830555,0.00025152205,0.00085629424,0.0005952414,0.0010399177,0.003851851],"category_scores_gemma":[0.00048473242,0.00017566985,0.0002995766,0.0015693592,0.00040492418,0.0012738821,0.0006703796,0.002069562,0.0039007936],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000065122615,0.000032083022,0.00012588713,0.0064271633,0.00003466882,0.00018955386,0.00004794446,0.00022111207,0.0027335496,0.0047325823,0.060534522,0.92485565],"study_design_scores_gemma":[0.0000070663727,0.000033210592,0.00036691126,0.0009101742,0.000021013,0.0008043301,0.000020915257,0.000038350183,0.00031191992,0.0015460785,0.99593276,0.0000073638166],"about_ca_topic_score_codex":0.0004965622,"about_ca_topic_score_gemma":0.0005792787,"teacher_disagreement_score":0.003851851,"about_ca_system_score_codex":0.0005895933,"about_ca_system_score_gemma":0.00086767296,"threshold_uncertainty_score":0.012885749},"labels":[],"label_agreement":null},{"id":"W2994169676","doi":"10.1016/j.molcel.2019.11.003","title":"Targeting UBE4A Revives Viperin Protein in Epithelium to Enhance Host Antiviral Defense","year":2019,"lang":"en","type":"article","venue":"Molecular Cell","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":74,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Science Foundation of Jiangsu Province; National Natural Science Foundation of China","keywords":"Biology; Antiviral protein; Acetylation; Virology; Cell biology; Interferon; Viral replication; Epithelium; Virus; Gene; RNA; Genetics","score_opus":0.0032652701633904845,"score_gpt":0.22217952222866752,"score_spread":0.21891425206527704,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2994169676","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9769539,0.006870402,0.008610227,0.000861017,0.00036627887,0.000052090185,0.00050178147,0.00021882234,0.0055654612],"genre_scores_gemma":[0.9868362,0.0010698552,0.003832772,0.00019862979,0.000029210569,0.000020174994,0.00028247465,0.000030897678,0.0076997485],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974114,0.000042592845,0.00001731008,0.000055546407,0.000058204583,0.00008526864],"domain_scores_gemma":[0.9999026,0.000011854893,0.000021185373,0.0000132086525,0.000014918356,0.000036145364],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030190597,0.00024921543,0.00029566212,0.00021362198,0.0002735174,0.00058881583,0.00027089647,0.00054285023,0.0030001083],"category_scores_gemma":[0.0001385184,0.00016145094,0.0003503402,0.00011168407,0.00031632622,0.00040973673,0.0005166262,0.0012389601,0.0008018268],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014901158,0.000018187828,0.00024051669,0.0000472794,0.000009447732,0.00005989133,0.000008406466,0.00008366632,0.99718755,0.0002824767,0.0001186518,0.0017949415],"study_design_scores_gemma":[0.000019259202,0.00015507166,0.0034934129,0.000009188809,0.000016362617,0.00022338094,0.00006543175,0.0012865362,0.9886452,0.00014491285,0.0059361174,0.0000051467964],"about_ca_topic_score_codex":0.000303805,"about_ca_topic_score_gemma":0.0005392144,"teacher_disagreement_score":0.0030001083,"about_ca_system_score_codex":0.00050354144,"about_ca_system_score_gemma":0.00025446166,"threshold_uncertainty_score":0.010036349},"labels":[],"label_agreement":null},{"id":"W2996536346","doi":"10.1139/cjas-2019-0161","title":"Structural features and antiviral function of the MDA5 gene in ducks (<i>Anas platyrhynchos</i>)","year":2019,"lang":"en","type":"article","venue":"Canadian Journal of Animal Science","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Biology; Molecular biology; Untranslated region; Complementary DNA; Rapid amplification of cDNA ends; MDA5; Messenger RNA; Open reading frame; Interferon regulatory factors; Gene; RNA; Peptide sequence; Transcription factor; Genetics; RNA interference","score_opus":0.007205988576635385,"score_gpt":0.21155204683385076,"score_spread":0.20434605825721538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2996536346","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99852306,0.0004314131,0.0005158043,0.000022166627,0.0000045793354,0.0000036512222,0.00022800268,0.000010865372,0.00026057355],"genre_scores_gemma":[0.99685067,0.00022437479,0.000976567,0.000036185083,0.0000041545654,0.00000790127,0.0008221798,0.000006408463,0.001071467],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999962,0.0000025783118,0.000004009746,0.00001691344,0.0000072847524,0.000007190818],"domain_scores_gemma":[0.99993765,0.000008521772,0.00002830172,0.000004640207,0.0000058487,0.0000150840315],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000387817,0.00012810942,0.000091542606,0.00015326777,0.00012909781,0.0001378873,0.00008063147,0.00015404445,0.00041355888],"category_scores_gemma":[0.000059826623,0.00008981413,0.00020481854,0.00007411948,0.00014833098,0.00011595538,0.000091610724,0.0002755204,0.00015773618],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003502527,0.000004491832,0.0008585858,0.000015878886,0.0000018792097,0.00004487484,0.000017000859,0.000024213701,0.99831605,0.00003122145,0.000008446147,0.0006424516],"study_design_scores_gemma":[0.000023626799,0.00070113846,0.31669894,0.000021569309,0.00007664565,0.0022497429,0.00033371456,0.002716578,0.67065716,0.00012886056,0.006364707,0.000027254098],"about_ca_topic_score_codex":0.0015138619,"about_ca_topic_score_gemma":0.0018131739,"teacher_disagreement_score":0.0015138619,"about_ca_system_score_codex":0.00031891372,"about_ca_system_score_gemma":0.00009134814,"threshold_uncertainty_score":0.0030100346},"labels":[],"label_agreement":null},{"id":"W2997405506","doi":"10.1111/cmi.13150","title":"Human microRNA‐30 inhibits influenza virus infection by suppressing the expression of SOCS1, SOCS3, and NEDD4","year":2019,"lang":"en","type":"article","venue":"Cellular Microbiology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China; China Postdoctoral Science Foundation; National Natural Science Foundation of China","keywords":"Biology; microRNA; SOCS3; Influenza A virus; Suppressor of cytokine signaling 1; Interferon; Suppressor of cytokine signalling; stat; Immune system; Virus; Virology; Immunology; Signal transduction; Cell biology; Gene; STAT3; Genetics; Suppressor","score_opus":0.009246137898426052,"score_gpt":0.23488805328874957,"score_spread":0.22564191539032352,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2997405506","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9891445,0.0039021908,0.0032764364,0.00012490049,0.00011724309,0.00006276571,0.00022546241,0.00016053836,0.0029861],"genre_scores_gemma":[0.9948466,0.0008929166,0.0025260162,0.000086146225,0.000015834677,0.000054184886,0.00028682593,0.000018799949,0.0012726883],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981683,0.00004867501,0.000024882633,0.00003133319,0.000041251365,0.000037075122],"domain_scores_gemma":[0.99994063,0.000010074567,0.000018415121,0.000007404211,0.000006873568,0.000016620184],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022475449,0.0003259575,0.0003558377,0.00018248263,0.00013969201,0.00026301455,0.00015211046,0.00018803017,0.0008576575],"category_scores_gemma":[0.00014498591,0.0001422706,0.0003220955,0.00007962615,0.00028991696,0.00014349815,0.00018233113,0.00036073636,0.0003068545],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037604087,0.00006520318,0.00021135402,0.000064963344,0.000013127182,0.000027166736,0.000014843671,0.00011095275,0.9954786,0.00018329635,0.00012706754,0.0033273052],"study_design_scores_gemma":[0.00006656894,0.0009755295,0.0030377135,0.0000069398507,0.000026629437,0.00025491332,0.000023081468,0.0020899354,0.9889416,0.00007599968,0.0044936906,0.000007384382],"about_ca_topic_score_codex":0.00033011494,"about_ca_topic_score_gemma":0.000650601,"teacher_disagreement_score":0.0008576575,"about_ca_system_score_codex":0.00028433383,"about_ca_system_score_gemma":0.0003487994,"threshold_uncertainty_score":0.0028691292},"labels":[],"label_agreement":null},{"id":"W2998220949","doi":"10.1007/s12275-020-9577-6","title":"Human cytomegalovirus IE86 protein aa 136–289 mediates STING degradation and blocks the cGAS-STING pathway","year":2020,"lang":"en","type":"article","venue":"The Journal of Microbiology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Sting; Transactivation; TRIF; Signal transducing adaptor protein; Medicine; Protein degradation; Biology; Receptor; Innate immune system; Cell biology; Toll-like receptor; Biochemistry; Gene; Gene expression; Internal medicine","score_opus":0.021748754773545514,"score_gpt":0.23721201127704392,"score_spread":0.2154632565034984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2998220949","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968591,0.00067252823,0.0016548516,0.00002630917,0.000011747184,0.000013784631,0.00013829314,0.00002119007,0.00060222374],"genre_scores_gemma":[0.9964394,0.00035806137,0.0015066998,0.000022571761,0.0000058136725,0.000013335476,0.00056136394,0.000009860929,0.0010828831],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987805,0.00002909519,0.000012915741,0.00001975455,0.000030492107,0.000029706895],"domain_scores_gemma":[0.99987805,0.00003151066,0.00003352482,0.000017430206,0.000010734138,0.000028825825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013655685,0.00028150968,0.00021337303,0.00009809398,0.000089526824,0.00018391378,0.000119751836,0.00015856423,0.00087585027],"category_scores_gemma":[0.00013831671,0.00008917254,0.00020927563,0.000074507254,0.00015560933,0.0001317517,0.00011346536,0.00047452058,0.00041022376],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000072261544,0.000021552409,0.00008054249,0.000011812719,0.000001807489,0.000012670564,0.0000035901262,0.000038051967,0.99942976,0.00002730392,0.000006387939,0.00029411732],"study_design_scores_gemma":[0.000007397379,0.00023078371,0.0023016597,0.0000030003746,0.000004869113,0.00012377703,0.0000073387964,0.0006338683,0.9960127,0.000016154678,0.0006568575,0.0000016424804],"about_ca_topic_score_codex":0.0002979005,"about_ca_topic_score_gemma":0.0003149741,"teacher_disagreement_score":0.00087585027,"about_ca_system_score_codex":0.0001868376,"about_ca_system_score_gemma":0.00016110907,"threshold_uncertainty_score":0.0029300451},"labels":[],"label_agreement":null},{"id":"W2998386519","doi":"10.3390/ijms21010252","title":"Overexpression of Hepatocyte Chemerin-156 Lowers Tumor Burden in a Murine Model of Diethylnitrosamine-Induced Hepatocellular Carcinoma","year":2019,"lang":"en","type":"article","venue":"International Journal of Molecular Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research; Deutsche Forschungsgemeinschaft","keywords":"Chemerin; Steatosis; Internal medicine; Endocrinology; Hepatocellular carcinoma; Hepatocyte; Cancer research; Biology; Medicine; Adipokine; Insulin resistance; In vitro","score_opus":0.01698585471143037,"score_gpt":0.2649911414598179,"score_spread":0.2480052867483875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2998386519","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949522,0.0009538099,0.0017074235,0.00013564448,0.000057043493,0.00006936339,0.00041004643,0.00021139302,0.0015031181],"genre_scores_gemma":[0.99110186,0.00085274363,0.0022165691,0.000050020848,0.000015532842,0.000085106185,0.0006357351,0.000043637865,0.004998766],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978477,0.000041728326,0.000025223198,0.000040994193,0.00006091636,0.000046354216],"domain_scores_gemma":[0.9997482,0.000023575101,0.00008178676,0.00003224013,0.000022926344,0.0000913502],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026516963,0.0005420266,0.0004144208,0.0005662237,0.00016792392,0.00029687982,0.00024507,0.00044383403,0.001648198],"category_scores_gemma":[0.00013602531,0.00025963408,0.00025658557,0.00021639338,0.0003147079,0.00028970392,0.00019746873,0.0009061599,0.0005162595],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003260955,0.0001436464,0.00012283152,0.000026920718,0.000004957102,0.000030517012,0.000015756359,0.000082025486,0.9984421,0.000061761864,0.000033311197,0.0007100052],"study_design_scores_gemma":[0.000075905846,0.002385217,0.0022780497,0.00000721416,0.000022829941,0.00021285316,0.00003224949,0.0010352406,0.99247676,0.000039218987,0.0014265422,0.000007821365],"about_ca_topic_score_codex":0.0007251885,"about_ca_topic_score_gemma":0.0011635848,"teacher_disagreement_score":0.001648198,"about_ca_system_score_codex":0.00044496343,"about_ca_system_score_gemma":0.00023908317,"threshold_uncertainty_score":0.0055137277},"labels":[],"label_agreement":null},{"id":"W3001799229","doi":"10.1016/j.celrep.2019.12.073","title":"Constitutive Interferon Attenuates RIPK1/3-Mediated Cytokine Translation","year":2020,"lang":"en","type":"article","venue":"Cell Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"RIPK1; Necroptosis; Cell biology; mTORC1; Biology; Signal transduction; Protein kinase B; Cytokine; ASK1; Protein kinase A; Kinase; Cancer research; Programmed cell death; Mitogen-activated protein kinase kinase; Immunology; Biochemistry; Apoptosis","score_opus":0.02214070400668239,"score_gpt":0.2319170235507667,"score_spread":0.20977631954408432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3001799229","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954619,0.0015474497,0.0014598664,0.00011317869,0.000047882808,0.000013405656,0.00025154732,0.00005783679,0.0010468595],"genre_scores_gemma":[0.99692756,0.0006184873,0.0010222656,0.000057403,0.000014548118,0.000019416173,0.00025147552,0.0000128340425,0.0010760005],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987483,0.000026830408,0.000014272114,0.000020260404,0.000026096375,0.000037653754],"domain_scores_gemma":[0.99989057,0.00002514063,0.000037594138,0.00001518089,0.0000089729265,0.000022664677],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016561551,0.00026475557,0.0002193682,0.00012209587,0.00009774131,0.00024008965,0.00009312648,0.00018797908,0.0010694503],"category_scores_gemma":[0.00010683325,0.000075547745,0.00016693937,0.000080868405,0.00023134117,0.00015921069,0.00016903931,0.0006712126,0.00027195903],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022298907,0.000026809532,0.00012452694,0.000025604435,0.0000022139493,0.000018414255,0.00000711842,0.000023810282,0.9988205,0.000051010273,0.000022151544,0.0006547454],"study_design_scores_gemma":[0.000016879756,0.00029382092,0.002593899,0.000005528542,0.000008569947,0.00010340124,0.000016889835,0.0004571,0.99545056,0.000041970517,0.0010093764,0.0000020719697],"about_ca_topic_score_codex":0.00016129875,"about_ca_topic_score_gemma":0.00030407446,"teacher_disagreement_score":0.0010694503,"about_ca_system_score_codex":0.00019821765,"about_ca_system_score_gemma":0.00020280434,"threshold_uncertainty_score":0.0035777092},"labels":[],"label_agreement":null},{"id":"W3003672174","doi":"10.1101/2020.01.30.928051","title":"Defective influenza A virus RNA products mediate MAVS-dependent upregulation of human leukocyte antigen class I proteins","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal; Dalhousie University; University of Windsor","funders":"University of Cambridge; Dalhousie University; University of Ottawa","keywords":"Downregulation and upregulation; Biology; Influenza A virus; Interferon; Virology; Cell biology; Virus; Gene","score_opus":0.023881862705973193,"score_gpt":0.24670451671023055,"score_spread":0.22282265400425735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3003672174","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99652356,0.0008306282,0.0013440825,0.00003521157,0.00003408519,0.000020064479,0.00031104864,0.000054227385,0.00084703474],"genre_scores_gemma":[0.9966883,0.00022038429,0.0009042401,0.00002691996,0.000011680139,0.000023808743,0.00056993606,0.000015635553,0.0015392958],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985504,0.000027694727,0.000014897672,0.000031096948,0.000033752003,0.000037563063],"domain_scores_gemma":[0.9998691,0.000031079006,0.00003224747,0.000022860231,0.0000132302475,0.00003145081],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011720835,0.00029292036,0.00014832546,0.0001601379,0.000095592135,0.0002797441,0.00013254948,0.00019730613,0.0013436236],"category_scores_gemma":[0.00011231825,0.00011113102,0.00032059033,0.000071598966,0.0001436041,0.00013416173,0.00020372221,0.00035475258,0.0006136602],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002650724,0.0000052608284,0.000054432134,0.00000842173,0.0000010618802,0.000013818703,0.0000026871478,0.0000069779717,0.99974924,0.0000147045475,0.000006535317,0.00011042735],"study_design_scores_gemma":[0.0000063892494,0.0002673373,0.005370799,0.0000033403462,0.0000057053494,0.00014502974,0.000020763411,0.0004315132,0.9927423,0.000024601424,0.0009797723,0.000002521875],"about_ca_topic_score_codex":0.00028509006,"about_ca_topic_score_gemma":0.00031964426,"teacher_disagreement_score":0.0013436236,"about_ca_system_score_codex":0.00023944817,"about_ca_system_score_gemma":0.00008835539,"threshold_uncertainty_score":0.0044949055},"labels":[],"label_agreement":null},{"id":"W3004028625","doi":"10.1128/mbio.03187-19","title":"Connexin-Dependent Transfer of cGAMP to Phagocytes Modulates Antiviral Responses","year":2020,"lang":"en","type":"letter","venue":"mBio","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Australian Research Council; Department of Education and Training; Medical Research Council; Fonds de Recherche du Québec - Santé; National Health and Medical Research Council; State Government of Victoria","keywords":"Connexin; Biology; Immune system; Extracellular; Cell biology; Immunology; Gap junction; Intracellular","score_opus":0.02259695465800814,"score_gpt":0.2506399828864949,"score_spread":0.22804302822848677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3004028625","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13650054,0.024211828,0.0035762514,0.74597114,0.028416852,0.00018825367,0.00023479747,0.00035849214,0.06054192],"genre_scores_gemma":[0.727756,0.01107643,0.0020473143,0.19608921,0.03961318,0.00023119079,0.000076041855,0.000050485854,0.02306017],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996824,0.00013756176,0.000025471058,0.00003645298,0.000059471633,0.000058565696],"domain_scores_gemma":[0.9992563,0.000505198,0.000056647976,0.000057041332,0.000058598987,0.0000661686],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048493367,0.00024497256,0.00030939726,0.00011693171,0.00047369173,0.00047191043,0.00022240916,0.005145429,0.0018667278],"category_scores_gemma":[0.0021796247,0.00010855581,0.00019721511,0.000075880445,0.00087123376,0.00036576207,0.00021590145,0.002506077,0.001040483],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0039564674,0.000398894,0.009063579,0.00086065225,0.000075118296,0.07741952,0.0008646323,0.0008242621,0.19522183,0.024846934,0.48836622,0.19810195],"study_design_scores_gemma":[0.0007245298,0.0016696325,0.018726775,0.00026661027,0.00006720141,0.044710286,0.0005206482,0.004250459,0.0715517,0.023666507,0.833759,0.00008663307],"about_ca_topic_score_codex":0.00037684242,"about_ca_topic_score_gemma":0.000600934,"teacher_disagreement_score":0.005145429,"about_ca_system_score_codex":0.0007598414,"about_ca_system_score_gemma":0.00021104378,"threshold_uncertainty_score":0.0062448382},"labels":[],"label_agreement":null},{"id":"W3005027756","doi":"10.1016/j.cyto.2020.155025","title":"Cross-talk between SUMOylation and ISGylation in response to interferon","year":2020,"lang":"en","type":"article","venue":"Cytokine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"Agence Nationale de Recherches sur le Sida et les Hépatites Virales; Genome Canada","keywords":"ISG15; SUMO protein; Tetherin; Biology; SAMHD1; Interferon; Downregulation and upregulation; Immune system; Cell biology; Ubiquitin; Gene; Genetics; Cell culture; Viral replication; Reverse transcriptase; RNA","score_opus":0.024919143094770054,"score_gpt":0.2892138202439673,"score_spread":0.26429467714919724,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3005027756","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9887334,0.0048788185,0.0024469758,0.00031137443,0.0001289154,0.000015308011,0.00015866531,0.000037057558,0.0032894204],"genre_scores_gemma":[0.99676824,0.00069687335,0.00042310497,0.00008063041,0.000026958038,0.00000840338,0.00019045443,0.0000074086893,0.0017979182],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998054,0.00003714746,0.000013230892,0.00003393688,0.000035541678,0.0000747831],"domain_scores_gemma":[0.9998789,0.000021299693,0.00002772628,0.000014738903,0.000018898685,0.000038368744],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036077658,0.00030624922,0.0003618968,0.00030629506,0.00030054356,0.0005051303,0.00019781812,0.00040654186,0.0022302289],"category_scores_gemma":[0.00020642858,0.00019153958,0.00043269148,0.00022312813,0.0002392898,0.00049318216,0.0004794,0.0005246149,0.0003940599],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010471327,0.00003185167,0.0017982615,0.000051140643,0.000022010028,0.00016172726,0.00003302181,0.00017927888,0.9922501,0.0006434322,0.00010597244,0.003676095],"study_design_scores_gemma":[0.00005210024,0.00037065067,0.13371693,0.000027289892,0.000039724135,0.0006075868,0.0002516261,0.0043479274,0.8556105,0.0013241555,0.0036320337,0.000019513736],"about_ca_topic_score_codex":0.0002158862,"about_ca_topic_score_gemma":0.00036601844,"teacher_disagreement_score":0.0022302289,"about_ca_system_score_codex":0.00038900692,"about_ca_system_score_gemma":0.00013991624,"threshold_uncertainty_score":0.0074608326},"labels":[],"label_agreement":null},{"id":"W3008121411","doi":"10.3389/fimmu.2020.00187","title":"Editorial: Immunoregulatory Mechanisms of Interferon","year":2020,"lang":"en","type":"editorial","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Autoimmunity; Immunology; Interferon; Immune system; Innate immune system; Immunity; Acquired immune system; Biology; Function (biology); Viral infection; Cell biology; Virus","score_opus":0.004765664434657777,"score_gpt":0.21974448268263813,"score_spread":0.21497881824798035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3008121411","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000038166727,0.003915811,0.0001049919,0.016652603,0.97821426,0.000010191407,0.000024031084,0.000032386677,0.0010076594],"genre_scores_gemma":[0.00048499103,0.0031135378,0.000084402236,0.011028996,0.97864074,0.000010867594,0.00002224327,0.000023558396,0.006590571],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971302,0.0005447861,0.00031166628,0.0004282405,0.0013877143,0.00019744228],"domain_scores_gemma":[0.98920995,0.003411555,0.00071155146,0.00026393018,0.004184204,0.002218742],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004367061,0.0036788655,0.002008208,0.0021593033,0.0021555822,0.0042633167,0.0025652202,0.008150561,0.010051595],"category_scores_gemma":[0.012312464,0.0007424753,0.001761811,0.00070186134,0.0020117671,0.0034136435,0.00096788927,0.012286443,0.009187363],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049525646,0.000010579733,0.000026568518,0.00020076412,0.000012435705,0.00015901178,0.000013388557,0.000026123605,0.00013069416,0.00029327293,0.9952679,0.0038096139],"study_design_scores_gemma":[0.000046639296,0.000036769354,0.0002622421,0.00024286227,0.000039192993,0.00059862115,0.00003162331,0.0001408914,0.00023758505,0.00096284505,0.9973858,0.000014918447],"about_ca_topic_score_codex":0.00079761905,"about_ca_topic_score_gemma":0.001967445,"teacher_disagreement_score":0.010051595,"about_ca_system_score_codex":0.002438568,"about_ca_system_score_gemma":0.0021462955,"threshold_uncertainty_score":0.03362596},"labels":[],"label_agreement":null},{"id":"W3011268799","doi":"10.4049/jimmunol.1900667","title":"NOD1 Promotes Antiviral Signaling by Binding Viral RNA and Regulating the Interaction of MDA5 and MAVS","year":2020,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Natural Science Foundation of China","keywords":"MDA5; Virology; RNA; Cell biology; Biology; Chemistry; Genetics; RNA interference","score_opus":0.014699782436958604,"score_gpt":0.24498726774203203,"score_spread":0.23028748530507342,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3011268799","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99414754,0.002504398,0.0015742519,0.00008011994,0.000028389453,0.000011682808,0.00022794877,0.0000508476,0.0013746762],"genre_scores_gemma":[0.99693584,0.00031036642,0.000643234,0.000033022377,0.000005196742,0.000012269063,0.00021190156,0.0000060908537,0.0018420389],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998324,0.00002561657,0.000012499541,0.000039238093,0.00003458031,0.000055655193],"domain_scores_gemma":[0.99992514,0.0000060681864,0.000022067059,0.000005451686,0.000009062713,0.000032190714],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014342525,0.00034920132,0.00016134445,0.00018206342,0.00016084721,0.000250323,0.0001521412,0.0002160219,0.0015419231],"category_scores_gemma":[0.00006833816,0.00012847445,0.00031053618,0.000058732792,0.00018404025,0.00017160525,0.000317828,0.0004192025,0.00040024956],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059478727,0.000005939492,0.000263092,0.000022997208,0.0000022761744,0.000023403893,0.000004551335,0.00001844003,0.9992803,0.00003739211,0.000020115454,0.0002621013],"study_design_scores_gemma":[0.000015325046,0.00020785676,0.021907719,0.00001504531,0.000017354556,0.000256708,0.00007396717,0.0015294006,0.9731708,0.00006510588,0.0027342038,0.0000064423175],"about_ca_topic_score_codex":0.00062301854,"about_ca_topic_score_gemma":0.0009336616,"teacher_disagreement_score":0.0015419231,"about_ca_system_score_codex":0.00041527796,"about_ca_system_score_gemma":0.00015974596,"threshold_uncertainty_score":0.005158186},"labels":[],"label_agreement":null},{"id":"W3011282656","doi":"10.1136/jitc-2019-000282","title":"Potent STING activation stimulates immunogenic cell death to enhance antitumor immunity in neuroblastoma","year":2020,"lang":"en","type":"article","venue":"Journal for ImmunoTherapy of Cancer","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":175,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Vanderbilt Institute of Chemical Biology, School of Medicine, Vanderbilt University; Division of Chemical, Bioengineering, Environmental, and Transport Systems; National Institute of Diabetes and Digestive and Kidney Diseases; American Cancer Society; Vanderbilt University Medical Center; Vanderbilt University; Stand Up To Cancer; National Cancer Institute; Entertainment Industry Foundation; National Science Foundation; Canadian Institutes of Health Research; Alex's Lemonade Stand Foundation for Childhood Cancer; Vanderbilt Digestive Diseases Research Center, Vanderbilt University Medical Center; American Association for Cancer Research; National Institutes of Health","keywords":"Sting; Stimulator of interferon genes; Cancer research; Neuroblastoma; Immunogenic cell death; Immunotherapy; CD8; Programmed cell death; T cell; Cancer immunotherapy; Medicine; Apoptosis; Blockade; Interferon; Immune checkpoint; Immunogenicity; Immune system; Cell cycle checkpoint; Immunology; Biology; Cell cycle; Cell culture; Cancer; Innate immune system; Receptor; Internal medicine","score_opus":0.022959950127284797,"score_gpt":0.32842297215300525,"score_spread":0.30546302202572045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3011282656","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99593866,0.0008827776,0.0022098518,0.000028794713,0.000012389093,0.000026142257,0.00009821655,0.000021729524,0.00078155595],"genre_scores_gemma":[0.996296,0.0006614901,0.002038981,0.000021450047,0.0000063688326,0.000032795684,0.00011551326,0.0000046478517,0.0008228068],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999471,0.000007923666,0.000004972359,0.000009480077,0.000019294848,0.000011188354],"domain_scores_gemma":[0.999972,0.000006161972,0.000008365812,0.000003180617,0.0000042804127,0.000005979284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009119653,0.00019426094,0.0001356352,0.00008292876,0.000055891585,0.00010679444,0.00008375953,0.00012848806,0.00076003914],"category_scores_gemma":[0.000047407248,0.000053743814,0.00014084374,0.00006277524,0.00010549595,0.00011676191,0.00009707865,0.00029615778,0.00011850604],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027751408,0.0000104221135,0.000053379208,0.000021902542,9.771289e-7,0.000012604205,0.0000065954355,0.000049928054,0.99934393,0.00002582885,0.000008987833,0.0004376928],"study_design_scores_gemma":[0.000008440739,0.00027955702,0.0011033422,0.0000036810632,0.0000044480125,0.000079046404,0.000008216402,0.0006397775,0.9971385,0.0000149643865,0.0007190606,0.0000010662216],"about_ca_topic_score_codex":0.00019525479,"about_ca_topic_score_gemma":0.00040323738,"teacher_disagreement_score":0.00076003914,"about_ca_system_score_codex":0.00017429603,"about_ca_system_score_gemma":0.000110374,"threshold_uncertainty_score":0.002542615},"labels":[],"label_agreement":null},{"id":"W3013157751","doi":"10.1101/2020.03.25.008920","title":"Pinpointing of cysteine oxidation sites in vivo by high-resolution proteomics reveals mechanism of redox-dependent inhibition of STING","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Université de Montréal; University of Calgary","keywords":"Cysteine; Chemistry; Proteome; In vivo; Function (biology); Biochemistry; Redox; Ligand (biochemistry); Cytosol; Cell biology; Biology; Enzyme; Receptor","score_opus":0.012197358724785841,"score_gpt":0.2123984387013412,"score_spread":0.20020107997655537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3013157751","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934191,0.00055506354,0.0052771103,0.000038216665,0.000008576355,0.000010573372,0.00023200425,0.000041268904,0.00041804402],"genre_scores_gemma":[0.9950931,0.00037712525,0.0034578706,0.000032610526,0.0000049045157,0.000012072456,0.00029224236,0.000011375416,0.0007187986],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99995244,0.000004786131,0.000002627718,0.000015380401,0.00001582317,0.000008943008],"domain_scores_gemma":[0.9999465,0.000008490218,0.000021914975,0.000005698345,0.0000085719585,0.000008834401],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010979016,0.00022752662,0.0001515639,0.00014870144,0.000097373566,0.00016961183,0.00015130355,0.00019440585,0.0005624005],"category_scores_gemma":[0.00010409792,0.00010498173,0.00019065439,0.00011637165,0.00015486951,0.0001641086,0.0001258496,0.00030415395,0.00018057419],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003186731,0.0000040313166,0.00020785944,0.000011167622,0.000001944571,0.0000115412995,0.000005734587,0.000022115666,0.9993267,0.000024447732,0.000007620698,0.00034496957],"study_design_scores_gemma":[0.000002628286,0.00006146553,0.008723524,0.0000024750534,0.000007445082,0.00011712887,0.000018438479,0.0013161988,0.9891812,0.000059993887,0.0005063443,0.0000031187867],"about_ca_topic_score_codex":0.00032362647,"about_ca_topic_score_gemma":0.00039206367,"teacher_disagreement_score":0.0005624005,"about_ca_system_score_codex":0.00019225336,"about_ca_system_score_gemma":0.000108686836,"threshold_uncertainty_score":0.0018814206},"labels":[],"label_agreement":null},{"id":"W3014542670","doi":"10.3389/fvets.2020.00152","title":"TRIM62 From Chicken as a Negative Regulator of Reticuloendotheliosis Virus Replication","year":2020,"lang":"en","type":"article","venue":"Frontiers in Veterinary Science","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Science Foundation of Shandong Province; National Natural Science Foundation of China","keywords":"Reticuloendotheliosis virus; Virology; Regulator; Replication (statistics); Biology; Viral replication; Virus; Genetics; Gene","score_opus":0.021665432374051986,"score_gpt":0.2668986932814314,"score_spread":0.2452332609073794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3014542670","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9862177,0.0077328677,0.002871179,0.00024385104,0.00005340084,0.000017635071,0.00025179624,0.00011291673,0.0024985876],"genre_scores_gemma":[0.99292713,0.0012871254,0.001845548,0.00008902127,0.000018082128,0.000016112177,0.000512197,0.000015199576,0.0032894695],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993145,0.000011443791,0.0000057881925,0.00002033063,0.000017020202,0.000013840177],"domain_scores_gemma":[0.9999474,0.000007852722,0.0000133730855,0.000006704316,0.000010368886,0.000014316391],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009667827,0.00016593875,0.00017567069,0.00018236764,0.00016697503,0.00020414998,0.00016291448,0.0002953035,0.0006976324],"category_scores_gemma":[0.00008731105,0.00009135912,0.00014920537,0.00006780768,0.00013398008,0.00012586161,0.00014650894,0.00026774485,0.00033073616],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000066844266,0.000005073886,0.00019838875,0.000033110067,0.0000020138916,0.000068200105,0.000010665035,0.00001869426,0.99861896,0.000065105734,0.000060544113,0.0008523436],"study_design_scores_gemma":[0.000025296828,0.00019490231,0.027010562,0.000021013928,0.0000326772,0.0009772608,0.00007465091,0.0025401942,0.9592465,0.00017545384,0.009692291,0.000009216236],"about_ca_topic_score_codex":0.00043399853,"about_ca_topic_score_gemma":0.00054301246,"teacher_disagreement_score":0.0006976324,"about_ca_system_score_codex":0.00020374144,"about_ca_system_score_gemma":0.00009439598,"threshold_uncertainty_score":0.0023338199},"labels":[],"label_agreement":null},{"id":"W3014698278","doi":"10.1371/journal.ppat.1008385","title":"Fine-tuning a blunt tool: Regulation of viral host shutoff RNases","year":2020,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Biology; Virology; Virus; Viral replication; Herpes simplex virus; Gene; Cell biology; Genetics","score_opus":0.025131880443595905,"score_gpt":0.22641669343921897,"score_spread":0.20128481299562306,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3014698278","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85629284,0.017611014,0.11203457,0.0011906284,0.00067703356,0.00018906264,0.00057758373,0.0014723336,0.009954862],"genre_scores_gemma":[0.9718803,0.0024099292,0.022068467,0.0003884359,0.00011515152,0.00007959922,0.00022009049,0.000121864454,0.002716177],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994179,0.00007627535,0.00004263263,0.00020973192,0.00016608558,0.00008738418],"domain_scores_gemma":[0.99945027,0.00014430398,0.00017386524,0.00006287669,0.0000652185,0.00010354045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00076844305,0.0004931199,0.00043648624,0.00033860057,0.00029824037,0.0015839618,0.00049665786,0.0005692011,0.001957343],"category_scores_gemma":[0.0006126497,0.00025112045,0.00036569758,0.00018535877,0.0007815485,0.0009007368,0.0006777724,0.0017384713,0.0006183111],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000094773444,0.00003912508,0.00020762604,0.000055154956,0.000007585365,0.000027567261,0.000018741115,0.00020357213,0.9928784,0.0011043611,0.00010847917,0.005254563],"study_design_scores_gemma":[0.000027552533,0.0005206827,0.001030305,0.000017077566,0.000024456374,0.0001681541,0.000040823277,0.0042137406,0.98201746,0.00075264554,0.011167997,0.000019239062],"about_ca_topic_score_codex":0.00017442704,"about_ca_topic_score_gemma":0.00032319297,"teacher_disagreement_score":0.001957343,"about_ca_system_score_codex":0.00066170347,"about_ca_system_score_gemma":0.000296164,"threshold_uncertainty_score":0.0065479875},"labels":[],"label_agreement":null},{"id":"W3015548725","doi":"10.3390/cells9040897","title":"Roles of GSK-3 and β-Catenin in Antiviral Innate Immune Sensing of Nucleic Acids","year":2020,"lang":"en","type":"review","venue":"Cells","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University; Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"IRF3; Innate immune system; Biology; TANK-binding kinase 1; Kinase; Cell biology; IκB kinase; Interferon regulatory factors; GSK-3; Transcription factor; Coactivator; Interferon; Signal transduction; Protein kinase A; Immune system; NF-κB; Immunology; Biochemistry; Mitogen-activated protein kinase kinase; Gene","score_opus":0.018220148384521847,"score_gpt":0.26738220609840846,"score_spread":0.2491620577138866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3015548725","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016536293,0.99846965,0.00013637441,0.00014009363,0.00019506825,0.0000032050752,0.000015779651,0.0000099494055,0.0008643855],"genre_scores_gemma":[0.0006710268,0.9983584,0.0001608133,0.00008564309,0.00016471701,0.00000484302,0.00003281954,0.0000015940108,0.0005200058],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99990463,0.000011272626,0.000016544156,0.000020898618,0.000033689972,0.000012878703],"domain_scores_gemma":[0.99988234,0.00003757709,0.000025044394,0.0000034614552,0.00003213238,0.000019423012],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002988207,0.0009198306,0.0009896443,0.0018500579,0.00022233537,0.00092590164,0.0005835326,0.0007799129,0.0024378537],"category_scores_gemma":[0.00028380164,0.00023511722,0.0002807822,0.0023050157,0.0003059218,0.0012732501,0.0006975483,0.0011221548,0.0021223712],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000078399826,0.000050682305,0.00016296416,0.013169813,0.00006313936,0.00023408144,0.00006325157,0.00031739278,0.0043417946,0.0023985396,0.019618947,0.9595011],"study_design_scores_gemma":[0.000010742644,0.00008149554,0.00086963736,0.002049043,0.00008599128,0.0010665237,0.000065183565,0.000081497325,0.00092271337,0.0016527214,0.9930952,0.000019184341],"about_ca_topic_score_codex":0.00047751167,"about_ca_topic_score_gemma":0.0007760052,"teacher_disagreement_score":0.0024378537,"about_ca_system_score_codex":0.00048102133,"about_ca_system_score_gemma":0.00094712625,"threshold_uncertainty_score":0.008155465},"labels":[],"label_agreement":null},{"id":"W3015643973","doi":"10.3390/v12040409","title":"Influenza PB1-F2 Inhibits Avian MAVS Signaling","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Biology; RIG-I; Interferon; Cell biology; Innate immune system; Signal transduction; Transfection; Immunoprecipitation; Virology; Signal transducing adaptor protein; Influenza A virus; Ubiquitin; Virus; Cell culture; Gene; Immune system; Genetics","score_opus":0.05929958668447607,"score_gpt":0.28474528216049483,"score_spread":0.22544569547601875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3015643973","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963536,0.0008721638,0.00048235743,0.00013074331,0.000026966927,0.000020166884,0.00046304634,0.000055519555,0.0015953343],"genre_scores_gemma":[0.9959636,0.000409027,0.00074949715,0.000068047106,0.000007858243,0.000026836427,0.00096049154,0.000013061281,0.0018015993],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998679,0.000025824213,0.00001185134,0.000020518095,0.000031648542,0.000042187934],"domain_scores_gemma":[0.9999273,0.000018135399,0.000013258579,0.000011771267,0.0000081545495,0.000021525804],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010103577,0.00032977902,0.0002494334,0.00013324023,0.00012682335,0.00020150366,0.0001676227,0.00024521255,0.0011515608],"category_scores_gemma":[0.000107397165,0.00010216844,0.00019782549,0.000095129006,0.00015725772,0.00010434141,0.00012733169,0.0004772928,0.0004444774],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013287876,0.0000558697,0.00013928232,0.000031524534,0.0000044046583,0.000026649761,0.00001006484,0.000054438093,0.99878174,0.000038514798,0.000100433674,0.0006242084],"study_design_scores_gemma":[0.000044662433,0.00072136906,0.0053608674,0.000005885916,0.000010036189,0.0002028274,0.000031563275,0.001081382,0.9905158,0.000019932697,0.0020020134,0.0000036783276],"about_ca_topic_score_codex":0.0020796272,"about_ca_topic_score_gemma":0.0025253212,"teacher_disagreement_score":0.0020796272,"about_ca_system_score_codex":0.00034205627,"about_ca_system_score_gemma":0.00023998575,"threshold_uncertainty_score":0.0041350126},"labels":[],"label_agreement":null},{"id":"W3019117339","doi":"10.1101/2020.04.20.052217","title":"SARS-CoV-2 Encodes a PPxY Late Domain Motif Known to Enhance Budding and Spread in Enveloped RNA Viruses","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Université Laval","keywords":"Ubiquitin ligase; ESCRT; Ubiquitin; NEDD4; RNA; Viral envelope; Virology; Virus; WW domain; Chemistry; Biology; Genetics; Computational biology; Gene; Endosome","score_opus":0.022644487723210673,"score_gpt":0.26895222926860685,"score_spread":0.24630774154539617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3019117339","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99379694,0.00043385697,0.004205501,0.00006613065,0.000026719887,0.00002683168,0.00044752684,0.00007202154,0.000924464],"genre_scores_gemma":[0.9916102,0.00017329349,0.005146623,0.00005370609,0.000011415989,0.000015128143,0.0011726156,0.000021338741,0.0017955833],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999224,0.000016898875,0.0000066213174,0.0000159798,0.000023266442,0.000014855572],"domain_scores_gemma":[0.9999188,0.000011708871,0.000028205559,0.00000906225,0.000007436786,0.000024760959],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012392698,0.00035413273,0.00014753484,0.00022016067,0.00012287419,0.00019147656,0.00010485408,0.00021643487,0.0014365155],"category_scores_gemma":[0.00009453011,0.00012731663,0.00034734877,0.000102471495,0.00018603959,0.00011892692,0.0001721295,0.00042128004,0.0006023119],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000598875,0.000013364415,0.00040034295,0.000010499387,0.000002923011,0.00010974576,0.0000047166027,0.00006247623,0.99882084,0.00007739169,0.000027809403,0.00040994704],"study_design_scores_gemma":[0.00003648536,0.00041116241,0.023950668,0.000010648235,0.000016084521,0.001201831,0.00004603393,0.0035124437,0.96651757,0.00015507526,0.004133306,0.000008683919],"about_ca_topic_score_codex":0.00044343589,"about_ca_topic_score_gemma":0.0005190191,"teacher_disagreement_score":0.0014365155,"about_ca_system_score_codex":0.00027693625,"about_ca_system_score_gemma":0.000171932,"threshold_uncertainty_score":0.004805565},"labels":[],"label_agreement":null},{"id":"W3019610200","doi":"10.4049/jimmunol.1900309","title":"Zebrafish NF-κB/p65 Is Required for Antiviral Responses","year":2020,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Natural Science Foundation of China","keywords":"Zebrafish; Biology; Proinflammatory cytokine; Viremia; Innate immune system; NF-κB; Immune system; Cell biology; Gene; Immunology; Virus; Virology; Inflammation; Signal transduction; Genetics","score_opus":0.03047082006814486,"score_gpt":0.2748650883433664,"score_spread":0.24439426827522157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3019610200","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9888782,0.0014223942,0.0057855747,0.00018649464,0.00006829413,0.000024393534,0.0010138778,0.00032768774,0.0022931958],"genre_scores_gemma":[0.9905855,0.00045920585,0.002356746,0.00007851689,0.000009348236,0.000038076345,0.0008292768,0.00008132759,0.005561998],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999808,0.000009328316,0.000017224716,0.000050399554,0.00006733672,0.000047635906],"domain_scores_gemma":[0.99977285,0.000016532906,0.000090592286,0.00002068171,0.000024670373,0.00007466644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000108862136,0.0004454092,0.00024246528,0.00038034725,0.00029940048,0.00026809867,0.00025710862,0.0003697789,0.0019012656],"category_scores_gemma":[0.00016879577,0.00026714767,0.00037496808,0.00012879558,0.00043085087,0.00026701143,0.00037768562,0.0006905267,0.00073896075],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003021803,0.0000036971878,0.00013678201,0.000015995805,0.0000011682024,0.00006378552,0.000008788858,0.000012764187,0.99931586,0.000055181663,0.000021421214,0.000334276],"study_design_scores_gemma":[0.000045030145,0.00016392878,0.02418907,0.00003017719,0.00004161479,0.0007994621,0.00011724035,0.0013275403,0.9672797,0.00022936732,0.0057532815,0.000023582084],"about_ca_topic_score_codex":0.0042253714,"about_ca_topic_score_gemma":0.0055531524,"teacher_disagreement_score":0.0042253714,"about_ca_system_score_codex":0.00055455894,"about_ca_system_score_gemma":0.000638921,"threshold_uncertainty_score":0.008401573},"labels":[],"label_agreement":null},{"id":"W3024776812","doi":"10.3389/fcimb.2020.00209","title":"Pattern Recognition Receptor Signaling and Innate Responses to Influenza A Viruses in the Mallard Duck, Compared to Humans and Chickens","year":2020,"lang":"en","type":"review","venue":"Frontiers in Cellular and Infection Microbiology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Alberta Innovates; University of Alberta","keywords":"Biology; Innate immune system; Virology; Pattern recognition receptor; Influenza A virus subtype H5N1; Virus; RIG-I; Viral replication; Effector; TLR3; TRIF; Influenza A virus; Receptor; Immune system; Immunology; Toll-like receptor; Genetics","score_opus":0.047859187018951616,"score_gpt":0.29619915430020977,"score_spread":0.24833996728125815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3024776812","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0047552204,0.9933129,0.00023500243,0.00018923069,0.0001468231,0.000004480075,0.00006702483,0.000010363168,0.0012788363],"genre_scores_gemma":[0.012052339,0.9853161,0.0004484365,0.00022512653,0.00027409225,0.000009778667,0.00022680071,0.0000027929332,0.0014446209],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99990416,0.000010912928,0.000023179822,0.000026703281,0.000020857771,0.0000141999635],"domain_scores_gemma":[0.99989045,0.000029079321,0.000030475014,0.000002400248,0.000032078813,0.000015455227],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002096367,0.00037595417,0.0006817592,0.0008046121,0.00015303018,0.00065666845,0.0002875131,0.00046782743,0.0012265624],"category_scores_gemma":[0.00020567552,0.0001324109,0.0003508195,0.00064216997,0.00016483158,0.00052515545,0.0002799202,0.00055776205,0.00042216023],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00059654564,0.000108554945,0.0045471094,0.029630678,0.00026979015,0.0007873937,0.00044732544,0.0008861247,0.060702555,0.0017559825,0.011937259,0.8883307],"study_design_scores_gemma":[0.000026967273,0.0009740743,0.049476694,0.003265455,0.0007029885,0.0036574518,0.0005677362,0.00055873237,0.010893582,0.0011573201,0.92862535,0.000093534814],"about_ca_topic_score_codex":0.0018605412,"about_ca_topic_score_gemma":0.0019699614,"teacher_disagreement_score":0.0018605412,"about_ca_system_score_codex":0.00036581996,"about_ca_system_score_gemma":0.00048785107,"threshold_uncertainty_score":0.004103303},"labels":[],"label_agreement":null},{"id":"W3026985884","doi":"10.1016/j.ebiom.2020.102801","title":"COVID-19 as a STING disorder with delayed over-secretion of interferon-beta","year":2020,"lang":"en","type":"article","venue":"EBioMedicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Sting; Stimulator of interferon genes; Interferon; Biology; Gene; Viral replication; DNA damage; RNA; Virology; Mutation; Virus; DNA; Immune system; Genetics; Innate immune system","score_opus":0.01660256304793454,"score_gpt":0.27943198351242027,"score_spread":0.2628294204644857,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3026985884","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94288784,0.018216824,0.0061069243,0.0037021756,0.00066673674,0.00027148653,0.0009250034,0.00036777725,0.02685516],"genre_scores_gemma":[0.9926549,0.0023964653,0.0011113273,0.00059870735,0.00020942796,0.000019321791,0.00027120425,0.000025373274,0.002713224],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.9997739,0.000018415072,0.000018681643,0.00009740561,0.0000326932,0.00005889053],"domain_scores_gemma":[0.99985754,0.000019255365,0.00003360576,0.000007702017,0.00001530447,0.000066647175],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009010623,0.0007493743,0.00052786747,0.00090788695,0.00065017235,0.0004744593,0.00035982102,0.0010890762,0.0025792513],"category_scores_gemma":[0.00032128766,0.0001868768,0.00036220005,0.0005599804,0.00054468575,0.0006643865,0.0004236115,0.0010511822,0.00036655302],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039680852,0.00017686884,0.040345155,0.00023178017,0.000046881403,0.89930063,0.0004581728,0.00019345082,0.037229214,0.0030602324,0.0025081006,0.016052755],"study_design_scores_gemma":[0.000025931204,0.00017388705,0.027709708,0.00011349381,0.0000499869,0.9611129,0.00013866657,0.00046352943,0.0027239046,0.001070882,0.0063924957,0.000024586621],"about_ca_topic_score_codex":0.0012081043,"about_ca_topic_score_gemma":0.0011425666,"teacher_disagreement_score":0.0025792513,"about_ca_system_score_codex":0.00048392126,"about_ca_system_score_gemma":0.00030067938,"threshold_uncertainty_score":0.008628428},"labels":[],"label_agreement":null},{"id":"W3027119763","doi":"10.1101/2020.05.20.106500","title":"A defect in COPI-mediated transport of STING causes immune dysregulation in COPA syndrome","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"National Institute of Allergy and Infectious Diseases; University of California, San Francisco; Cleveland Clinic Foundation; Sandler Foundation; National Heart, Lung, and Blood Institute; Foundation for the National Institutes of Health","keywords":"Sting; COPI; Golgi apparatus; Cell biology; Immune dysregulation; Biology; Wild type; Interferon; Immune system; Mutant; Immunology; Endoplasmic reticulum; Secretory pathway; Genetics; Gene","score_opus":0.014358921230685828,"score_gpt":0.218377940691821,"score_spread":0.20401901946113518,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3027119763","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.985954,0.0013303511,0.008076906,0.00035234864,0.00015450685,0.000026848596,0.0014444874,0.00039109992,0.002269315],"genre_scores_gemma":[0.9866304,0.0012656332,0.005652745,0.0001362499,0.00008019908,0.000028993541,0.0016276179,0.0001949651,0.004383119],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998518,0.000024429386,0.000021775202,0.000036024292,0.00004895077,0.00001687412],"domain_scores_gemma":[0.9998336,0.000040022464,0.00004542563,0.000019002611,0.000008850158,0.000053181535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000114540155,0.0008871555,0.00036701423,0.00088479184,0.0002564107,0.00028178276,0.0002591684,0.00087005727,0.0038181378],"category_scores_gemma":[0.0002773265,0.00020098481,0.0004256005,0.0003052523,0.0005323003,0.000213645,0.00047612927,0.0008580299,0.0012938221],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023492312,0.000041560143,0.0020360346,0.00006688174,0.000041613093,0.007686766,0.0000560967,0.00016715197,0.9841421,0.0005514346,0.00072068104,0.0042546773],"study_design_scores_gemma":[0.000115012976,0.0003004251,0.040310822,0.000042382228,0.0001216569,0.06528146,0.000105958745,0.0034057966,0.87658966,0.0010169387,0.012681753,0.000028129902],"about_ca_topic_score_codex":0.00043476126,"about_ca_topic_score_gemma":0.00035229418,"teacher_disagreement_score":0.0038181378,"about_ca_system_score_codex":0.00024351849,"about_ca_system_score_gemma":0.0001749649,"threshold_uncertainty_score":0.012772918},"labels":[],"label_agreement":null},{"id":"W3027349817","doi":"10.1016/j.ajhg.2020.04.015","title":"De Novo SOX6 Variants Cause a Neurodevelopmental Syndrome Associated with ADHD, Craniosynostosis, and Osteochondromas","year":2020,"lang":"en","type":"article","venue":"The American Journal of Human Genetics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"Medical Research Council; Cancer Research UK; Wellcome Trust; Agence Nationale de la Recherche; Children's Hospital of Philadelphia","keywords":"Haploinsufficiency; Genetics; Biology; Testis determining factor; Missense mutation; Craniosynostosis; Nonsense; Allele; Phenotype; Autism; Neurodevelopmental disorder; Gene; Psychology; Y chromosome","score_opus":0.018891865300398304,"score_gpt":0.24283584416521048,"score_spread":0.22394397886481218,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3027349817","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948677,0.00048043154,0.0011207027,0.00052402815,0.00010130528,0.000030203051,0.0007029486,0.00005880212,0.0021138526],"genre_scores_gemma":[0.99758494,0.00016046052,0.001095679,0.00010483322,0.00007978197,0.000006221772,0.0002055624,0.000023277758,0.00073919765],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.9994499,0.00006722555,0.00006925693,0.00013466238,0.00020926331,0.00006975347],"domain_scores_gemma":[0.9990095,0.0003750546,0.00029286894,0.000036143094,0.0000688481,0.00021763176],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020613767,0.0015474218,0.00041292267,0.0011387629,0.0007943379,0.00048540215,0.0005827939,0.0017366144,0.003220826],"category_scores_gemma":[0.0012799766,0.0002881665,0.00052577496,0.0007087745,0.00090467726,0.00020438993,0.0006308516,0.0008248578,0.00037800006],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001104601,0.00018062613,0.122382775,0.00013355754,0.00030682996,0.6619793,0.0011070624,0.00085136754,0.19456935,0.0028709853,0.0015947446,0.0129187945],"study_design_scores_gemma":[0.00020545287,0.00032262376,0.3145389,0.00014304087,0.00030761817,0.65001386,0.00096046797,0.0024650574,0.022234278,0.002663317,0.0060730367,0.00007246961],"about_ca_topic_score_codex":0.0033219068,"about_ca_topic_score_gemma":0.005522106,"teacher_disagreement_score":0.0033219068,"about_ca_system_score_codex":0.00036983725,"about_ca_system_score_gemma":0.00035417156,"threshold_uncertainty_score":0.010774732},"labels":[],"label_agreement":null},{"id":"W3029417048","doi":"10.4049/jimmunol.2000245","title":"Characterization of DNA Binding and Nuclear Retention Identifies Zebrafish IRF11 as a Positive Regulator of IFN Antiviral Response","year":2020,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Zebrafish; Biology; Nuclear localization sequence; Transcription factor; Cell biology; Promoter; Transcription (linguistics); NLS; Gene; Response element; DNA; Nuclear export signal; Binding site; Genetics; Cell nucleus; Molecular biology; Gene expression","score_opus":0.01067216917911064,"score_gpt":0.2224643034732186,"score_spread":0.21179213429410795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3029417048","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99108267,0.0007827844,0.0048228754,0.00012646265,0.000019639654,0.000025712643,0.00080048107,0.00006139783,0.0022780162],"genre_scores_gemma":[0.9869464,0.0004905382,0.0053279623,0.00008018897,0.000009703203,0.000039046372,0.0021937492,0.00002679838,0.004885636],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993324,0.0000037345476,0.0000040725095,0.000019524812,0.000020222516,0.00001917275],"domain_scores_gemma":[0.99993813,0.0000080164,0.000015369827,0.000007485151,0.000012474651,0.000018461427],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007200157,0.00025128547,0.00012372495,0.00020126862,0.00017800769,0.00012622109,0.00018375777,0.0002316778,0.0020204305],"category_scores_gemma":[0.00009180495,0.00010799538,0.00030599354,0.00007867386,0.00016046042,0.00012817883,0.00014689151,0.0003416826,0.0007362085],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017141714,0.000003276624,0.00026521253,0.000010509182,8.2151007e-7,0.00003421381,0.000004630291,0.000017224138,0.9991855,0.000035330388,0.000015309286,0.00041074076],"study_design_scores_gemma":[0.000017812916,0.00024763268,0.03867066,0.000011093375,0.00002507488,0.001092067,0.000055920253,0.0018792822,0.95200175,0.000118191296,0.0058675897,0.0000129077125],"about_ca_topic_score_codex":0.002111646,"about_ca_topic_score_gemma":0.0027097834,"teacher_disagreement_score":0.002111646,"about_ca_system_score_codex":0.00037708372,"about_ca_system_score_gemma":0.00023384401,"threshold_uncertainty_score":0.006758988},"labels":[],"label_agreement":null},{"id":"W3029728756","doi":"10.3389/fimmu.2020.01081","title":"Innate Immune Sensing by Cells of the Adaptive Immune System","year":2020,"lang":"en","type":"review","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Armand-Frappier Foundation","keywords":"Immune system; Innate immune system; Acquired immune system; CCL18; Innate lymphoid cell; Biology; Immunology; Classical complement pathway; Computer science; Complement system","score_opus":0.012148258113075149,"score_gpt":0.23132612159408875,"score_spread":0.2191778634810136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3029728756","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016000553,0.9972458,0.00016571891,0.00018134859,0.00029118854,0.0000038494622,0.00002163039,0.000007829064,0.0019227592],"genre_scores_gemma":[0.0008645762,0.9976998,0.00014397295,0.00011879565,0.00027967783,0.000004871592,0.00003427248,0.0000011315977,0.00085293874],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998692,0.000019378835,0.00001507476,0.000025785732,0.000053591608,0.000016891627],"domain_scores_gemma":[0.9998803,0.00004705269,0.000019074294,0.000004426795,0.000030946496,0.000018111352],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026976294,0.0007532753,0.0009140443,0.001498192,0.00022294014,0.00079316355,0.00048333578,0.00066586694,0.0033974922],"category_scores_gemma":[0.00027123658,0.00016367853,0.00026154294,0.0015719495,0.00037244608,0.0010018989,0.0006676685,0.0012996527,0.002845766],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000068891466,0.00004124878,0.0002075028,0.013560149,0.000037641705,0.00019580616,0.00008107233,0.00020206199,0.007396832,0.004437122,0.028702741,0.9450689],"study_design_scores_gemma":[0.0000051188385,0.000046896315,0.00080564857,0.002144922,0.00003268425,0.0009843817,0.0000556347,0.00003318338,0.0007322262,0.002300244,0.9928483,0.0000108203885],"about_ca_topic_score_codex":0.00035589043,"about_ca_topic_score_gemma":0.00045155702,"teacher_disagreement_score":0.0033974922,"about_ca_system_score_codex":0.00040053888,"about_ca_system_score_gemma":0.0007032999,"threshold_uncertainty_score":0.011365771},"labels":[],"label_agreement":null},{"id":"W3033665581","doi":"10.1002/ajmg.a.61621","title":"Maternal <scp>SLE</scp> and brachytelephalangic chondrodysplasia punctata in a patient with unrelated de novo <scp><i>RAF1</i></scp> and <scp><i>SIX2</i></scp> variants","year":2020,"lang":"en","type":"article","venue":"American Journal of Medical Genetics Part A","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; SickKids Foundation; Mount Sinai Hospital; North York General Hospital; University of Toronto","funders":"","keywords":"Exome sequencing; Medicine; Phenotype; Hypoplasia; Genetics; Biology; Internal medicine; Gene","score_opus":0.007876109423581018,"score_gpt":0.22474557394268,"score_spread":0.21686946451909897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3033665581","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970438,0.0003496878,0.0006362269,0.00041509228,0.000025807127,0.00002556106,0.00011787155,0.00002748968,0.0013584378],"genre_scores_gemma":[0.9988223,0.00015442833,0.0004980536,0.000090707224,0.000031675863,0.0000059573063,0.000036324836,0.0000070273595,0.00035356075],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.999579,0.000044246364,0.000054616226,0.00015219185,0.00006799725,0.00010187874],"domain_scores_gemma":[0.9993674,0.0002258445,0.00014597812,0.000035927093,0.000031318632,0.00019358814],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024225986,0.000984618,0.00041922048,0.0015167897,0.0011315186,0.0005961478,0.00048530754,0.0020061391,0.0015616987],"category_scores_gemma":[0.0013008242,0.00051952765,0.0005372925,0.00060695346,0.00090327126,0.00042969215,0.0007612058,0.0012613834,0.0003131832],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000078054574,0.000035599245,0.03382359,0.000024957235,0.000014801415,0.95475554,0.0005645289,0.00009832304,0.008237738,0.00019699757,0.00013485334,0.0020349708],"study_design_scores_gemma":[0.000010298249,0.0000874903,0.026842138,0.0000106847365,0.000020198868,0.9701017,0.00016030522,0.00023264159,0.0020719809,0.00009140373,0.00036098855,0.000010137507],"about_ca_topic_score_codex":0.0027608739,"about_ca_topic_score_gemma":0.0027574636,"teacher_disagreement_score":0.0027608739,"about_ca_system_score_codex":0.00061210495,"about_ca_system_score_gemma":0.00040337155,"threshold_uncertainty_score":0.0054896474},"labels":[],"label_agreement":null},{"id":"W3034874940","doi":"10.3389/fimmu.2020.01255","title":"Protein Dynamics in Cytosolic DNA-Sensing Antiviral Innate Immune Signaling Pathways","year":2020,"lang":"en","type":"review","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Innate immune system; Biology; Signal transduction; Signal transducing adaptor protein; Interferon; Pattern recognition receptor; Cell biology; Immune system; Interferon type I; Intrinsic immunity; Immunology","score_opus":0.018311715504503143,"score_gpt":0.2502602296439796,"score_spread":0.23194851413947645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3034874940","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00026117038,0.99843735,0.00013098275,0.00014885468,0.00015985838,0.000002114171,0.00000945904,0.0000055351657,0.00084463356],"genre_scores_gemma":[0.0015388147,0.99725,0.00015071916,0.00013312796,0.0002017632,0.0000041716853,0.000023407874,0.0000013076299,0.0006966688],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999012,0.000015332764,0.000012785763,0.000021279844,0.00003434473,0.000015136323],"domain_scores_gemma":[0.99990034,0.000038509752,0.000017941315,0.00000293676,0.000027805016,0.0000124265425],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026996748,0.0006966259,0.00083281595,0.0012666085,0.00021619478,0.00076032494,0.00048936426,0.000901814,0.0015043991],"category_scores_gemma":[0.00023045266,0.00023655382,0.00026138415,0.0011887125,0.0004229965,0.0011250906,0.00054662256,0.0012458747,0.0015488046],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001556464,0.000061006605,0.0002943619,0.0177394,0.000066637134,0.0003804942,0.00009859494,0.00063126907,0.01537153,0.008641026,0.022933993,0.9336261],"study_design_scores_gemma":[0.000011888239,0.00009164796,0.0011380023,0.0014704613,0.00006415814,0.001548455,0.000050764793,0.0001946494,0.0026695302,0.003208602,0.9895315,0.000020397943],"about_ca_topic_score_codex":0.00049752946,"about_ca_topic_score_gemma":0.00059198274,"teacher_disagreement_score":0.0015043991,"about_ca_system_score_codex":0.000613585,"about_ca_system_score_gemma":0.0005954953,"threshold_uncertainty_score":0.005032718},"labels":[],"label_agreement":null},{"id":"W3035175399","doi":"10.1016/j.dci.2020.103759","title":"Xela DS2 and Xela VS2: Two novel skin epithelial-like cell lines from adult African clawed frog (Xenopus laevis) and their response to an extracellular viral dsRNA analogue","year":2020,"lang":"en","type":"article","venue":"Developmental & Comparative Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"University of Waterloo","keywords":"Xenopus; Biology; Amphibian; Cell biology; African clawed frog; Extracellular; Cell culture; Frog Skin; Epithelium; Immunology; Genetics; Gene; Ecology; Chemistry","score_opus":0.024623548735765576,"score_gpt":0.25716959957470636,"score_spread":0.23254605083894078,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3035175399","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9882295,0.0007415835,0.005938538,0.00015654074,0.000072664756,0.000103238744,0.0018688934,0.00008486406,0.0028041638],"genre_scores_gemma":[0.9691897,0.0006898827,0.007867148,0.00013364271,0.000034925244,0.00018237409,0.0060752216,0.000078409474,0.015748747],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99977964,0.000036829602,0.000035601824,0.000041768126,0.000056461522,0.000049650283],"domain_scores_gemma":[0.9997912,0.000055254895,0.000038021393,0.000036823774,0.000028135608,0.00005060175],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002494165,0.0002466553,0.00021356721,0.00035068288,0.00030195343,0.0003562472,0.00031967807,0.00034163037,0.0032340335],"category_scores_gemma":[0.00017512914,0.00017677397,0.0003740769,0.00022116466,0.00028348903,0.00029370977,0.00024559675,0.0008058555,0.0010725218],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008768119,0.000017517215,0.00020397494,0.000014783437,0.0000031353968,0.00006961919,0.000029974668,0.000017921426,0.9990139,0.00010433979,0.000036196372,0.00040099313],"study_design_scores_gemma":[0.000032592572,0.00036773598,0.009606039,0.000005846386,0.000024195278,0.0011436804,0.00017934688,0.0004689273,0.9823877,0.000032038773,0.005743982,0.000007909285],"about_ca_topic_score_codex":0.00069770956,"about_ca_topic_score_gemma":0.0013716494,"teacher_disagreement_score":0.0032340335,"about_ca_system_score_codex":0.0001684652,"about_ca_system_score_gemma":0.00013655164,"threshold_uncertainty_score":0.010818899},"labels":[],"label_agreement":null},{"id":"W3035828086","doi":"10.1038/s41467-020-16819-z","title":"A missense mutation in the MLKL brace region promotes lethal neonatal inflammation and hematopoietic dysfunction","year":2020,"lang":"en","type":"article","venue":"Nature Communications","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"National Institute of General Medical Sciences; GlaxoSmithKline; Japan Society for the Promotion of Science; Core Research for Evolutional Science and Technology; National Health and Medical Research Council; National Institutes of Health; University of Melbourne; Ministry of Education, Culture, Sports, Science and Technology; Cancer Australia; Diabetes Australia; University of Oxford; Japan Agency for Medical Research and Development; State Government of Victoria; Versus Arthritis; Australian Government; Howard Hughes Medical Institute; Jack Brockhoff Foundation; Marshfield Clinic Research Foundation; Victorian Cancer Agency; Lorenzo and Pamela Galli Charitable Trust; Wellcome Trust; QIMR Berghofer Medical Research Institute; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Medical Research Council","keywords":"Missense mutation; Biology; Inflammation; Compound heterozygosity; Phenotype; Mutation; Cell biology; Genetics; Heterozygote advantage; Immunology; Allele; Gene","score_opus":0.02058031993596113,"score_gpt":0.26797022215834665,"score_spread":0.24738990222238552,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3035828086","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99820673,0.00016689033,0.0006604538,0.00006262686,0.000015588657,0.000012072305,0.00016323698,0.00005031413,0.0006620357],"genre_scores_gemma":[0.9987827,0.00009775699,0.0003961383,0.00002979271,0.000006503005,0.0000070469723,0.00011760747,0.000015845773,0.00054654496],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982375,0.000029089975,0.00001745148,0.000041297786,0.000052335046,0.000036155136],"domain_scores_gemma":[0.99974483,0.000074572476,0.00007800497,0.000013677476,0.000009133888,0.00007972795],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013183654,0.00050779554,0.00024259617,0.00031923037,0.00017526913,0.00017046872,0.00023878746,0.00050679024,0.0021894139],"category_scores_gemma":[0.00029517515,0.00013432982,0.00019173582,0.00015035593,0.00040265618,0.00009710345,0.0002972749,0.0004361541,0.000301526],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037258962,0.00008578993,0.0040177326,0.000042093612,0.000024531639,0.012976818,0.00006258749,0.00015960798,0.9792419,0.00029730672,0.00017196557,0.0025470913],"study_design_scores_gemma":[0.00028951745,0.0026021346,0.17669886,0.000082877676,0.00016053225,0.14744227,0.00035504202,0.0036189943,0.6628553,0.00051399326,0.005325287,0.000055158023],"about_ca_topic_score_codex":0.0005663802,"about_ca_topic_score_gemma":0.00077105843,"teacher_disagreement_score":0.0021894139,"about_ca_system_score_codex":0.00026059707,"about_ca_system_score_gemma":0.0001783252,"threshold_uncertainty_score":0.007324338},"labels":[],"label_agreement":null},{"id":"W3036059081","doi":"10.1101/2020.06.18.160614","title":"Mechanism and inhibition of SARS-CoV-2 PLpro","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"National Health and Medical Research Council; MTPConnect; Therapeutic Innovation Australia; University of Toronto; Australian Synchrotron; Australian Cancer Research Foundation; Australian Government; Australian Nuclear Science and Technology Organisation","keywords":"ISG15; Ubiquitin; Proteases; Protease; Innate immune system; Biology; Chemistry; Deubiquitinating enzyme; Biochemistry; Viral replication; Immune system; Virology; Virus; Enzyme; Genetics; Gene","score_opus":0.02442977859690949,"score_gpt":0.23875845767255297,"score_spread":0.21432867907564349,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3036059081","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97091305,0.015044765,0.0056461543,0.00022418748,0.00009430993,0.0003193362,0.0011351323,0.0001758448,0.006447133],"genre_scores_gemma":[0.98970604,0.0031763462,0.0017496591,0.00012271314,0.000024012037,0.00009725275,0.00088805036,0.000011914581,0.0042238906],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998877,0.00002403752,0.000008981274,0.00001994853,0.000028997714,0.00003037393],"domain_scores_gemma":[0.999961,0.0000063593116,0.0000117136315,0.0000053066883,0.000007104345,0.0000084977855],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020384345,0.0006420167,0.00031737323,0.00031943008,0.00013433673,0.00023246463,0.00024620304,0.00033226295,0.0013640319],"category_scores_gemma":[0.000070685695,0.00013440834,0.00040618877,0.00015072843,0.00019576857,0.00019098591,0.00017720465,0.00042186253,0.0006528483],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029276113,0.00013208533,0.00020568776,0.00014246962,0.000016306247,0.000119017284,0.000012352804,0.0004161447,0.99282163,0.00023731367,0.00020993789,0.005394264],"study_design_scores_gemma":[0.00007499155,0.00154856,0.001720399,0.000009220411,0.000014414823,0.00037638334,0.000010913835,0.0011576397,0.99116874,0.000057677335,0.0038569137,0.000004176785],"about_ca_topic_score_codex":0.00026822725,"about_ca_topic_score_gemma":0.00035529802,"teacher_disagreement_score":0.0013640319,"about_ca_system_score_codex":0.00026380943,"about_ca_system_score_gemma":0.00017203629,"threshold_uncertainty_score":0.004563093},"labels":[],"label_agreement":null},{"id":"W3037805953","doi":"10.1101/2020.06.24.168971","title":"Cell cycle checkpoints cooperate to suppress DNA and RNA associated molecular pattern recognition and anti-tumor immune responses","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto","funders":"National Institutes of Health; Johns Hopkins University; University of Pennsylvania","keywords":"Mitosis; Biology; DNA damage; Immune system; Cell cycle; G2-M DNA damage checkpoint; Cell biology; Cancer research; Cell cycle checkpoint; Cyclin-dependent kinase 1; DNA repair; Pattern recognition receptor; Cancer; DNA; Immunology; Innate immune system; Genetics","score_opus":0.014817084762062407,"score_gpt":0.21497506454108342,"score_spread":0.200157979779021,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3037805953","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909599,0.0025041422,0.0026079766,0.00014066818,0.00004406895,0.000021963533,0.00026189155,0.00015680882,0.0033025737],"genre_scores_gemma":[0.9949163,0.00042995176,0.0009479059,0.00003815487,0.000009924991,0.000014925827,0.00023819001,0.000023854405,0.0033807023],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991965,0.000010724781,0.0000053363397,0.000014274985,0.000018373863,0.000031613043],"domain_scores_gemma":[0.9999329,0.000008049391,0.000020587562,0.000013900568,0.00000497821,0.000019501618],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009427607,0.00026130688,0.00017207894,0.000215425,0.0001049432,0.000255643,0.0001381376,0.0002175158,0.0020980083],"category_scores_gemma":[0.0000715576,0.00009780732,0.00015369336,0.000101680525,0.00018702404,0.00013287204,0.00019362074,0.00039013347,0.00077727635],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010741249,0.000017244149,0.00014596262,0.000016019003,0.0000026119126,0.000036369438,0.000004152987,0.0000685816,0.9984363,0.00017290744,0.00004864309,0.00094390445],"study_design_scores_gemma":[0.000014314365,0.000098329554,0.0022123393,0.0000028162099,0.0000040923514,0.00013060098,0.000007122779,0.00057018845,0.99476516,0.00009556749,0.0020979964,0.0000014090552],"about_ca_topic_score_codex":0.00024094798,"about_ca_topic_score_gemma":0.0003841842,"teacher_disagreement_score":0.0020980083,"about_ca_system_score_codex":0.00025205043,"about_ca_system_score_gemma":0.00016293935,"threshold_uncertainty_score":0.0070185065},"labels":[],"label_agreement":null},{"id":"W3041675387","doi":"","title":"The pro-cell death Bcl-2 family member, BNIP3 is mutated in breast tumors and this mutation increases resistance to hypoxia-induced cell death in breast cancer cell lines","year":2006,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba","funders":"","keywords":"Biology; Cancer research; Programmed cell death; Breast cancer; Missense mutation; Mutation; Nonsense mutation; Gene; Molecular biology; Cancer; Apoptosis; Genetics","score_opus":0.03531103678156038,"score_gpt":0.327340931588527,"score_spread":0.2920298948069666,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3041675387","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99619895,0.0010621884,0.0012809683,0.00010821868,0.000018070292,0.000016184596,0.00034836272,0.000047793077,0.0009193022],"genre_scores_gemma":[0.9927961,0.0008791621,0.0020918846,0.0000795508,0.0000072613966,0.00003405382,0.0014813072,0.000019408428,0.002611327],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985397,0.000019626705,0.000012076599,0.00002650127,0.000057581987,0.000030282436],"domain_scores_gemma":[0.999877,0.0000359427,0.000026324722,0.000016793441,0.000015077709,0.000028927852],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012847655,0.00022153211,0.00018099789,0.0002688135,0.00017710717,0.00017562546,0.00012752111,0.0002576782,0.0016344236],"category_scores_gemma":[0.00018232175,0.00017442288,0.000171547,0.00019089744,0.00017755,0.00011520407,0.000121565536,0.00043030307,0.0004800345],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004336209,0.000010900881,0.00080076756,0.000015449365,0.0000044794547,0.000104069266,0.000009103901,0.000022710223,0.99815375,0.000022984146,0.000034690533,0.0007777087],"study_design_scores_gemma":[0.000024034076,0.00026179053,0.03701229,0.000007834464,0.000029919362,0.0032037017,0.00004093269,0.00090053165,0.9536763,0.00007129515,0.0047661187,0.000005402654],"about_ca_topic_score_codex":0.0009614601,"about_ca_topic_score_gemma":0.0015072935,"teacher_disagreement_score":0.0016344236,"about_ca_system_score_codex":0.00030705202,"about_ca_system_score_gemma":0.00021717139,"threshold_uncertainty_score":0.0054676533},"labels":[],"label_agreement":null},{"id":"W3041938320","doi":"10.1016/j.jaci.2020.06.032","title":"A novel STING1 variant causes a recessive form of STING-associated vasculopathy with onset in infancy (SAVI)","year":2020,"lang":"en","type":"letter","venue":"Journal of Allergy and Clinical Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of Allergy and Infectious Diseases; National Institutes of Health; Cincinnati Children’s Research Foundation; Division of Intramural Research, National Institute of Allergy and Infectious Diseases","keywords":"Sting; Genetics; Pediatrics; Medicine; Biology; Physics","score_opus":0.026639636077354326,"score_gpt":0.292213109980065,"score_spread":0.2655734739027107,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3041938320","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97373575,0.0058742813,0.004475889,0.0014278254,0.00029389412,0.0001000198,0.0025852965,0.0004124037,0.011094706],"genre_scores_gemma":[0.9908173,0.0012558597,0.0028576627,0.0002795276,0.00012295244,0.000019442365,0.00089409464,0.00006155715,0.003691517],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9997855,0.000028865712,0.000022297803,0.000059674006,0.00006000345,0.00004371639],"domain_scores_gemma":[0.9996463,0.000116853415,0.0000985042,0.0000123102,0.000027976726,0.00009798363],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017299794,0.00121298,0.0006605337,0.0010260821,0.00039000946,0.00033555258,0.00043594502,0.001022715,0.0044035884],"category_scores_gemma":[0.0008465996,0.00019982246,0.00057238265,0.000893971,0.0003528005,0.00034149617,0.00042035198,0.0006565418,0.0007962105],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042313745,0.00008271102,0.017058296,0.0002448502,0.000103497696,0.89983594,0.00056511327,0.00021795194,0.05721517,0.002013143,0.0039799646,0.018260337],"study_design_scores_gemma":[0.0000541557,0.00028884597,0.04905558,0.00013680352,0.00013378264,0.93389654,0.00014805776,0.00066792895,0.006816599,0.0006960577,0.008065825,0.00003982569],"about_ca_topic_score_codex":0.001773975,"about_ca_topic_score_gemma":0.0016871417,"teacher_disagreement_score":0.0044035884,"about_ca_system_score_codex":0.000355791,"about_ca_system_score_gemma":0.00029035623,"threshold_uncertainty_score":0.014731467},"labels":[],"label_agreement":null},{"id":"W3042288856","doi":"10.1038/s41417-020-0199-2","title":"Human SNF5 arming of double-deleted vaccinia virus shows oncolytic and cytostatic activity against central nervous system atypical teratoid/rhabdoid tumor cells","year":2020,"lang":"en","type":"article","venue":"Cancer Gene Therapy","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; University of Calgary","funders":"Alberta Children's Hospital Foundation","keywords":"Oncolytic virus; Biology; Vaccinia; Virus; Cancer research; Epigenetics; Virology; Population; Gene; Genetics; Medicine","score_opus":0.028980620103558664,"score_gpt":0.26993729341804407,"score_spread":0.2409566733144854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3042288856","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974496,0.000516459,0.00076859456,0.000035223962,0.000025827161,0.000011476264,0.00017176245,0.000024897667,0.0009961313],"genre_scores_gemma":[0.9975073,0.0002071605,0.0007293183,0.00001773284,0.000006237291,0.000008640673,0.00040969613,0.0000067652554,0.0011072198],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989724,0.000014287686,0.000010091641,0.000016990849,0.000019057723,0.000042235228],"domain_scores_gemma":[0.9999318,0.000019399982,0.000012788045,0.000011816885,0.0000049013192,0.000019281695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012416235,0.00027194998,0.0001809865,0.00018828097,0.000119401215,0.00019241711,0.00015737307,0.00022626451,0.00095122564],"category_scores_gemma":[0.00007699794,0.00008953126,0.00022901552,0.00013110328,0.00019782702,0.00012550698,0.0000994037,0.00039386682,0.00018953282],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015943607,0.00003061917,0.00017757158,0.0000153067,0.0000071131667,0.00003080495,0.000008341584,0.000095245756,0.9986223,0.00013010658,0.000037972237,0.0006851217],"study_design_scores_gemma":[0.000012476746,0.0002780784,0.0014487304,0.0000014640332,0.000012755583,0.00009870112,0.000007901751,0.0005344334,0.9968933,0.000017265036,0.00069351797,0.0000014360995],"about_ca_topic_score_codex":0.0011226904,"about_ca_topic_score_gemma":0.0013512295,"teacher_disagreement_score":0.0011226904,"about_ca_system_score_codex":0.00029493717,"about_ca_system_score_gemma":0.00021369616,"threshold_uncertainty_score":0.0031821728},"labels":[],"label_agreement":null},{"id":"W3042928905","doi":"10.3390/v12070755","title":"Innate Immune Sensing of Influenza A Virus","year":2020,"lang":"en","type":"review","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":101,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Public Health Agency of Canada","keywords":"Innate immune system; Pattern recognition receptor; RIG-I; Interferon; Biology; Influenza A virus; Virus; Virology; Immune system; Proinflammatory cytokine; Pyrin domain; Immunology; MDA5; Viral replication; Inflammasome; Inflammation; Gene; RNA interference; Genetics","score_opus":0.07778057556814046,"score_gpt":0.3505998385159559,"score_spread":0.27281926294781544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3042928905","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016557031,0.99710053,0.00014583867,0.00016293749,0.0003609485,0.0000050131107,0.000017366692,0.000009490939,0.0020322078],"genre_scores_gemma":[0.0008604313,0.9974015,0.00013671201,0.0001450957,0.00021716254,0.000005293812,0.0000426509,0.0000014787196,0.0011896815],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998919,0.000017749739,0.000013216249,0.000018603303,0.000043466276,0.0000150495325],"domain_scores_gemma":[0.999926,0.000021557496,0.000012403701,0.0000029361604,0.000023528708,0.000013654668],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025103043,0.0007004167,0.00075656513,0.0011980713,0.00020731066,0.00061835675,0.00055059115,0.00063921034,0.0031210778],"category_scores_gemma":[0.00022848664,0.00019783228,0.00028996562,0.0010371652,0.00026041552,0.00085248944,0.00056612684,0.0012921725,0.0028093797],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007459814,0.00005951931,0.00014750837,0.013893307,0.00005908964,0.00023777157,0.000061791565,0.0003217063,0.00800382,0.0040256786,0.041298844,0.93181646],"study_design_scores_gemma":[0.0000066204657,0.00007285163,0.0005698787,0.001351234,0.000027613281,0.0008781904,0.000028264363,0.000052623298,0.00063522754,0.0012729065,0.9950956,0.000009041186],"about_ca_topic_score_codex":0.0005393868,"about_ca_topic_score_gemma":0.00071484636,"teacher_disagreement_score":0.0031210778,"about_ca_system_score_codex":0.00042029304,"about_ca_system_score_gemma":0.0006263404,"threshold_uncertainty_score":0.010441065},"labels":[],"label_agreement":null},{"id":"W3045057145","doi":"10.1101/2020.07.23.218339","title":"Primate innate immune responses to bacterial and viral pathogens reveals an evolutionary trade-off between strength and specificity","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Heart Institute; Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"Office of Research Infrastructure Programs, National Institutes of Health; National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; Compute Canada; Emory University; National Institutes of Health; National Science Foundation","keywords":"Biology; Immune system; Innate immune system; Rhesus macaque; Immunology; Gene; Baboon; Transcriptome; Macaque; Stimulation; Interferon; Genetics; Virus; Gene expression; Neuroscience; Ecology","score_opus":0.01823355886405652,"score_gpt":0.24130553089126133,"score_spread":0.2230719720272048,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3045057145","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99531245,0.0015997925,0.001200415,0.000117272866,0.000008596627,0.0000065569247,0.0002502143,0.000025020177,0.0014797144],"genre_scores_gemma":[0.99670935,0.00066911004,0.0011567294,0.00012274647,0.000012615641,0.000022963826,0.00031431759,0.000012431276,0.000979715],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997881,0.000046976074,0.000008471792,0.000089646055,0.00003332653,0.000033501605],"domain_scores_gemma":[0.9998265,0.00004667146,0.00004162605,0.00002857707,0.00002699334,0.000029784165],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025109987,0.0001985199,0.00027360738,0.0004574341,0.00040814833,0.0006651411,0.00017149092,0.00041976396,0.001599711],"category_scores_gemma":[0.00033057696,0.00022635644,0.00020625387,0.0003075102,0.0006032725,0.00031097705,0.0005792964,0.000614996,0.00031173724],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021236394,0.00002010005,0.0167451,0.00012119316,0.000059265865,0.00017766429,0.0005717124,0.00012357971,0.9733652,0.0003212918,0.00008570539,0.0081967395],"study_design_scores_gemma":[0.000014388047,0.00071963127,0.92522645,0.000076191274,0.00010266218,0.0023820724,0.0020545844,0.0011629151,0.056852218,0.0019045476,0.009459866,0.00004462328],"about_ca_topic_score_codex":0.0004835763,"about_ca_topic_score_gemma":0.00080580445,"teacher_disagreement_score":0.001599711,"about_ca_system_score_codex":0.00013900385,"about_ca_system_score_gemma":0.000112924696,"threshold_uncertainty_score":0.0053515434},"labels":[],"label_agreement":null},{"id":"W3045899263","doi":"10.1084/jem.20201045","title":"A defect in COPI-mediated transport of STING causes immune dysregulation in COPA syndrome","year":2020,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":192,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"National Heart, Lung, and Blood Institute; Japan Society for the Promotion of Science; University of California, San Francisco; National Institutes of Health; National Institute of Allergy and Infectious Diseases; Japan Agency for Medical Research and Development; Cleveland Clinic Foundation; Cleveland Clinic; Sandler Foundation; Sanofi","keywords":"Sting; COPI; Golgi apparatus; Immune dysregulation; Cell biology; Biology; Interferon; Immune system; Immunology; Endoplasmic reticulum; Secretory pathway","score_opus":0.022888188674363746,"score_gpt":0.2739316289209143,"score_spread":0.25104344024655056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3045899263","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99661416,0.00031961795,0.002153172,0.000082069426,0.000027926575,0.000012967262,0.00025810982,0.000078734665,0.00045323494],"genre_scores_gemma":[0.9974806,0.00024128266,0.001564914,0.0000401117,0.00001435437,0.000009655816,0.00018510372,0.000036275902,0.00042777022],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978644,0.000044972276,0.000035104767,0.000058673148,0.000050132654,0.000024637417],"domain_scores_gemma":[0.99971825,0.000057849527,0.000091719594,0.000020547566,0.000012875788,0.000098726094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012419421,0.0010681663,0.0003728372,0.00081581477,0.00024785596,0.00023719863,0.00027427785,0.0006837372,0.0021277708],"category_scores_gemma":[0.0003533419,0.00021349452,0.00041851873,0.0003133902,0.0006488227,0.00020556046,0.0004285631,0.00058793457,0.00036292983],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032014586,0.000064632615,0.0044067563,0.000055542943,0.000055655033,0.010477916,0.000062282605,0.00018745457,0.9808342,0.0004049401,0.00018681033,0.0029437034],"study_design_scores_gemma":[0.00025059225,0.0010894806,0.1313817,0.00008046042,0.00029986657,0.18239127,0.00022844845,0.006946588,0.67063797,0.0011686113,0.0054558623,0.00006902179],"about_ca_topic_score_codex":0.0004817613,"about_ca_topic_score_gemma":0.0004840045,"teacher_disagreement_score":0.0021277708,"about_ca_system_score_codex":0.00024414877,"about_ca_system_score_gemma":0.0002028962,"threshold_uncertainty_score":0.007118106},"labels":[],"label_agreement":null},{"id":"W3047338291","doi":"10.1158/1538-7445.pedca19-a38","title":"Abstract A38: Validation of potential therapies for treatment of fatal pediatric brain tumors DIPG and AT/RT using a novel rapid intracranial model in zebrafish","year":2020,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Cancer research; Glioma; Medicine; Atypical teratoid rhabdoid tumor; Cisplatin; Apoptosis; Pathology; Biology; Internal medicine; Medulloblastoma; Chemotherapy","score_opus":0.09994247141706654,"score_gpt":0.369490882238782,"score_spread":0.2695484108217155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3047338291","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9771262,0.0027735804,0.010011163,0.000530532,0.00012158442,0.0005439928,0.002954406,0.0003979948,0.005540486],"genre_scores_gemma":[0.97314703,0.002444463,0.0128280325,0.00013504726,0.000015956852,0.00045818713,0.0018688446,0.00007315413,0.009029312],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980944,0.000023884462,0.000013536471,0.000048216018,0.00006852486,0.000036401332],"domain_scores_gemma":[0.9998802,0.00001681638,0.000028224113,0.000012999265,0.000028733666,0.000033006647],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035382426,0.00063227094,0.0004032264,0.0003723609,0.0002774283,0.00025729794,0.0005570243,0.0005254596,0.002357576],"category_scores_gemma":[0.00015679881,0.00015755731,0.0005071515,0.000128923,0.00033420563,0.0002916819,0.00020195337,0.00084339496,0.00046856963],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001384866,0.000070434035,0.00011115832,0.00007385817,0.000011021846,0.00009025988,0.000026474652,0.0002271781,0.9970481,0.0001369019,0.00018328603,0.0018829184],"study_design_scores_gemma":[0.00007896603,0.0032625396,0.0017192279,0.000016056561,0.00006047513,0.0003037966,0.000055581328,0.0014057169,0.98791575,0.000060591403,0.0051092994,0.0000119792785],"about_ca_topic_score_codex":0.009182108,"about_ca_topic_score_gemma":0.009790688,"teacher_disagreement_score":0.009182108,"about_ca_system_score_codex":0.00096755184,"about_ca_system_score_gemma":0.0006862577,"threshold_uncertainty_score":0.01825732},"labels":[],"label_agreement":null},{"id":"W3080855264","doi":"10.15252/embj.2020106275","title":"Mechanism and inhibition of the papain‐like protease, PLpro, of SARS‐CoV‐2","year":2020,"lang":"en","type":"article","venue":"The EMBO Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":494,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"State Government of Victoria; University of Toronto; National Health and Medical Research Council; Nederlandse Organisatie voor Wetenschappelijk Onderzoek","keywords":"ISG15; Biology; Ubiquitin; Protease; Proteases; Biochemistry; Papain; Deubiquitinating enzyme; Proteolysis; Virology; Enzyme; Gene","score_opus":0.02384696065661638,"score_gpt":0.24130999639548206,"score_spread":0.2174630357388657,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3080855264","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97845924,0.0077564865,0.0054441304,0.0005122277,0.00018607402,0.000104236315,0.00031465027,0.00013526951,0.007087728],"genre_scores_gemma":[0.99467826,0.0012647782,0.0006974552,0.00011036743,0.00003653083,0.000040649407,0.00015595727,0.000007856955,0.0030082818],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988246,0.000026596872,0.0000057825246,0.000014065753,0.00002396465,0.00004709382],"domain_scores_gemma":[0.99994445,0.000017224898,0.000014039994,0.000008796308,0.0000073974775,0.000008075457],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002568952,0.00047137451,0.0002625603,0.00016744553,0.00019826491,0.00031629606,0.00035106455,0.00043262015,0.0014084553],"category_scores_gemma":[0.00013451363,0.00020486854,0.0004123704,0.00006543187,0.00028169842,0.00033424544,0.00016104305,0.00059009506,0.0003936827],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049537234,0.00008308019,0.00013796195,0.00007628624,0.000013104591,0.00019057041,0.000017006898,0.0002582823,0.99515957,0.0009094571,0.00017734748,0.002481956],"study_design_scores_gemma":[0.00007975052,0.0006462531,0.0023824167,0.000006624599,0.000016114158,0.000680127,0.000018515047,0.0026323535,0.9910322,0.00026584038,0.0022346575,0.000005192874],"about_ca_topic_score_codex":0.0002423123,"about_ca_topic_score_gemma":0.00019242152,"teacher_disagreement_score":0.0014084553,"about_ca_system_score_codex":0.00026076907,"about_ca_system_score_gemma":0.00021088365,"threshold_uncertainty_score":0.004711747},"labels":[],"label_agreement":null},{"id":"W3081631090","doi":"10.1186/s13223-020-00473-7","title":"Inflammatory cutaneous lesions and pulmonary manifestations in a new patient with autosomal recessive ISG15 deficiency case report","year":2020,"lang":"en","type":"article","venue":"Allergy Asthma and Clinical Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Agence Nationale de la Recherche","keywords":"ISG15; Phenotype; Exome sequencing; Compound heterozygosity; Gene; Ubiquitin; Medicine; Biology; Immunology; Genetics; Bioinformatics; Cancer research","score_opus":0.01763766218592198,"score_gpt":0.27176426631589745,"score_spread":0.25412660412997545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3081631090","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9919206,0.0013088287,0.0014559124,0.0006708975,0.0000743262,0.00007428807,0.00019319664,0.00014032962,0.004161667],"genre_scores_gemma":[0.9979748,0.0003643513,0.00060957536,0.00016541408,0.000103678576,0.000010034569,0.000054958717,0.00001470991,0.000702492],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9995983,0.00004061592,0.000035565372,0.00016249903,0.000054084547,0.00010895932],"domain_scores_gemma":[0.99926835,0.00021378715,0.00014177765,0.000055813183,0.000046451896,0.00027377557],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028711237,0.0015945049,0.0009980828,0.0016495923,0.0012403411,0.0010691987,0.0006220767,0.0021088999,0.002256113],"category_scores_gemma":[0.0010847502,0.00068856444,0.00063155603,0.0007367233,0.0009944381,0.0006167449,0.00088827166,0.0010665125,0.00041140994],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003308191,0.000031734016,0.00738772,0.000022549511,0.000010137888,0.9891734,0.0001377623,0.000046167832,0.00206465,0.00008528613,0.00013564991,0.0008718857],"study_design_scores_gemma":[0.000010820268,0.00005310975,0.0059718257,0.0000075012304,0.000012611352,0.99299157,0.000051964536,0.00016847286,0.00040198016,0.00005509631,0.00026981233,0.0000052136156],"about_ca_topic_score_codex":0.0014919938,"about_ca_topic_score_gemma":0.001539369,"teacher_disagreement_score":0.002256113,"about_ca_system_score_codex":0.00057091995,"about_ca_system_score_gemma":0.00031005192,"threshold_uncertainty_score":0.0075474977},"labels":[],"label_agreement":null},{"id":"W3081667730","doi":"10.4049/jimmunol.1901387","title":"Zebrafish RBM47 Promotes Lysosome-Dependent Degradation of MAVS to Inhibit IFN Induction","year":2020,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Youth Innovation Promotion Association; National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Lysosome; Zebrafish; Cell biology; Degradation (telecommunications); Chemistry; Biology; Computer science; Biochemistry; Gene; Telecommunications","score_opus":0.02052582047748717,"score_gpt":0.2412856928827426,"score_spread":0.22075987240525544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3081667730","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99130815,0.0022401905,0.0033580225,0.00017712469,0.000050184655,0.00002926073,0.0003583737,0.00017019431,0.0023084315],"genre_scores_gemma":[0.99360585,0.0006166503,0.0016611714,0.000071635564,0.00000869125,0.00003680491,0.00034593072,0.000030366442,0.0036229105],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998845,0.000011596333,0.000009988773,0.000023728144,0.000030713352,0.000039363906],"domain_scores_gemma":[0.9999399,0.0000060262055,0.000022364886,0.000008137173,0.0000075514863,0.000015945918],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012609766,0.0003276171,0.00025844417,0.0002260767,0.00014855307,0.00020309132,0.00015229768,0.00027866548,0.0014911749],"category_scores_gemma":[0.00009217592,0.00014249705,0.00042951774,0.00007851362,0.00026273486,0.00019544814,0.00018578593,0.0004521391,0.0004978086],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006452946,0.0000106242605,0.00012228337,0.000029742476,0.0000030460385,0.000019889963,0.000008214083,0.000033256063,0.9991394,0.00007251438,0.00003884744,0.00045744778],"study_design_scores_gemma":[0.000010283534,0.000111496214,0.0021887799,0.000003943207,0.000009801449,0.000057598296,0.000014082651,0.0008004049,0.995368,0.000025436118,0.0014063609,0.000003812172],"about_ca_topic_score_codex":0.0012826804,"about_ca_topic_score_gemma":0.0016970438,"teacher_disagreement_score":0.0014911749,"about_ca_system_score_codex":0.00043442444,"about_ca_system_score_gemma":0.0003286513,"threshold_uncertainty_score":0.004988551},"labels":[],"label_agreement":null},{"id":"W3081872965","doi":"10.1158/1557-3265.ovca19-b78","title":"Abstract B78: Improving chemotherapy response of immunologically cold high-grade serous ovarian cancer with loss of PTEN using STING agonist","year":2020,"lang":"en","type":"article","venue":"Clinical Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"PTEN; Ovarian cancer; Cancer research; CD8; Carboplatin; Tumor microenvironment; Biology; Immune system; Chemotherapy; Medicine; Cancer; Immunology; Cisplatin; Internal medicine; PI3K/AKT/mTOR pathway; Apoptosis","score_opus":0.17442062526095364,"score_gpt":0.44368292081746646,"score_spread":0.2692622955565128,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3081872965","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997948,0.0005767964,0.00049619994,0.00008370936,0.000039279275,0.000039631697,0.00014748459,0.000040862917,0.0006280487],"genre_scores_gemma":[0.9967033,0.0005074702,0.0008894352,0.00008061939,0.00001788707,0.000058701993,0.00024386149,0.000008230638,0.0014904842],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999391,0.0000067965366,0.0000051878096,0.000010089869,0.000016101621,0.0000226337],"domain_scores_gemma":[0.99995327,0.0000032450273,0.000012584101,0.0000040108052,0.0000030335782,0.0000238812],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008732903,0.00025295033,0.00028635786,0.00021755978,0.00008408652,0.00016323185,0.00018409712,0.00021788258,0.0015772494],"category_scores_gemma":[0.00007039967,0.00008071132,0.00019325408,0.00013663057,0.00014875193,0.00014468555,0.00014943504,0.00052928145,0.00024621948],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014832473,0.00061750744,0.0004450391,0.00009997745,0.00001554142,0.000071064664,0.000020342863,0.00022898405,0.98745817,0.00009757769,0.00021819577,0.0092444895],"study_design_scores_gemma":[0.00070525403,0.020597609,0.010147259,0.000024149203,0.00009708703,0.0005326853,0.00005878398,0.00210964,0.96039176,0.00009353337,0.005228186,0.000014136571],"about_ca_topic_score_codex":0.00024012878,"about_ca_topic_score_gemma":0.00040320068,"teacher_disagreement_score":0.0015772494,"about_ca_system_score_codex":0.000111920104,"about_ca_system_score_gemma":0.0001585816,"threshold_uncertainty_score":0.0052764416},"labels":[],"label_agreement":null},{"id":"W3081945098","doi":"10.1080/22221751.2020.1818633","title":"HIV-1 resists MxB inhibition of viral Rev protein","year":2020,"lang":"en","type":"article","venue":"Emerging Microbes & Infections","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Nuclear transport; Small interfering RNA; Virology; Nuclear export signal; Biology; Viral structural protein; Viral replication; Viral protein; Antiviral protein; Nuclear localization sequence; Interferon; Nuclear protein; DNA; RNA; Cell nucleus; Viral entry; Virus; Genetics; Gene; Transcription factor","score_opus":0.010825740361278443,"score_gpt":0.2340693115320091,"score_spread":0.22324357117073065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3081945098","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99129605,0.004390113,0.0008884665,0.00016587281,0.0000244308,0.000030877713,0.00010762354,0.00004459368,0.003051891],"genre_scores_gemma":[0.9949418,0.0011496847,0.0008249276,0.000083207415,0.000012874953,0.000029626814,0.00021225662,0.0000057858774,0.0027397634],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998913,0.000027818052,0.0000071775316,0.000013386907,0.000025257828,0.000035044894],"domain_scores_gemma":[0.99995446,0.000008863138,0.000011372488,0.0000070912074,0.0000052510954,0.000012991481],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001530477,0.00017012803,0.00017685792,0.00010706781,0.000107509775,0.00027012225,0.000107032494,0.000223106,0.00097708],"category_scores_gemma":[0.00011456877,0.00011869523,0.00014808691,0.0000434761,0.00013850282,0.00012219393,0.00015059482,0.00052030146,0.0002548764],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000070489354,0.00003401005,0.0001845915,0.000030303738,0.0000035470289,0.000030867875,0.000012269415,0.0000424895,0.9976246,0.00021584741,0.00008847351,0.0016625583],"study_design_scores_gemma":[0.000059828257,0.0013397359,0.008500913,0.000025785117,0.000018775287,0.0012035567,0.000049882845,0.0013763214,0.9732354,0.00018994203,0.013992473,0.000007353686],"about_ca_topic_score_codex":0.00017861857,"about_ca_topic_score_gemma":0.00025956501,"teacher_disagreement_score":0.00097708,"about_ca_system_score_codex":0.00013194897,"about_ca_system_score_gemma":0.00010069451,"threshold_uncertainty_score":0.0032685995},"labels":[],"label_agreement":null},{"id":"W3082024563","doi":"10.3389/fphar.2020.578599","title":"Mitochondria Targeted Viral Replication and Survival Strategies—Prospective on SARS-CoV-2","year":2020,"lang":"en","type":"review","venue":"Frontiers in Pharmacology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":86,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Trois-Rivières","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Mitochondrion; Cell biology; Immune system; Viral replication; Organelle; Mitochondrial DNA; RNA; Mechanism (biology); Virus; Virology; Genetics; Gene","score_opus":0.029800752047845117,"score_gpt":0.3491809514070363,"score_spread":0.3193801993591912,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3082024563","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001685846,0.9981053,0.00013034938,0.0003399357,0.00030860712,0.0000037538023,0.000013538462,0.0000070010715,0.0009228261],"genre_scores_gemma":[0.00095401175,0.99760485,0.0001227146,0.00031509364,0.00022312926,0.0000065752865,0.000029700926,0.0000018039615,0.00074206316],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999895,0.00002015324,0.0000125713,0.00002118725,0.000033917917,0.00001724265],"domain_scores_gemma":[0.9998784,0.00004984868,0.000016131155,0.000003879907,0.00003358903,0.000018195942],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040427007,0.0006594769,0.0009661061,0.0011878635,0.00024885236,0.00093196984,0.0006503453,0.0010686829,0.0025231494],"category_scores_gemma":[0.00036772047,0.0002541031,0.0004200856,0.00092790026,0.00036555307,0.0013378724,0.00068091543,0.002123449,0.0017086514],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013980317,0.00010153152,0.00012081154,0.015502039,0.000064279324,0.00030665568,0.00010892338,0.00058942696,0.005971686,0.009732454,0.04206032,0.925302],"study_design_scores_gemma":[0.000014438614,0.00014842683,0.00038587578,0.001772376,0.000049447564,0.000798173,0.000042090418,0.00011649788,0.00065705815,0.0021302942,0.9938704,0.000014902914],"about_ca_topic_score_codex":0.0004978172,"about_ca_topic_score_gemma":0.00096014194,"teacher_disagreement_score":0.0025231494,"about_ca_system_score_codex":0.0005748437,"about_ca_system_score_gemma":0.0005672359,"threshold_uncertainty_score":0.008440793},"labels":[],"label_agreement":null},{"id":"W3083339796","doi":"10.1158/1538-7445.am2020-5393","title":"Abstract 5393: Association of heat shock proteins as chaperone for STING: A potential link in a key immune activation mechanism revealed by the novel anti-cancer agent PV-10","year":2020,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Alberta Children's Hospital","funders":"","keywords":"Sting; Immune system; Western blot; THP1 cell line; Cytokine; Heat shock protein; Cancer research; Cell culture; Medicine; Biology; Chemistry; Molecular biology; Immunology; Biochemistry; Gene","score_opus":0.06485820800207646,"score_gpt":0.35635676419954304,"score_spread":0.29149855619746656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3083339796","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990119,0.0040546353,0.0037006135,0.0002709723,0.00006151165,0.000026496964,0.00046210733,0.0000811446,0.0012234797],"genre_scores_gemma":[0.9931932,0.0014524751,0.0023776172,0.00010743166,0.000031384814,0.000018162613,0.00072009064,0.000009300153,0.0020903437],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993944,0.000009274294,0.000003606848,0.000011535267,0.000018089671,0.000018045372],"domain_scores_gemma":[0.9999553,0.0000053130693,0.000016989048,0.0000035325834,0.0000058996084,0.00001294541],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007574598,0.0002505883,0.00017552117,0.000112217516,0.00009874304,0.0001719784,0.00013327124,0.00025366328,0.0019389985],"category_scores_gemma":[0.00006572949,0.00006790442,0.00020752681,0.00014030849,0.00014495426,0.00014450548,0.00012945839,0.00038777394,0.00046664182],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009707085,0.000014628431,0.00016268282,0.000030935415,0.000003137576,0.000063689346,0.0000060068633,0.00002290624,0.9986772,0.00004293172,0.00005422582,0.00082468527],"study_design_scores_gemma":[0.00001354365,0.00040688203,0.009829757,0.000010754211,0.000015691441,0.00058120117,0.00001971234,0.0008224246,0.9853166,0.00008303513,0.0028962821,0.000004135637],"about_ca_topic_score_codex":0.000149917,"about_ca_topic_score_gemma":0.00017208142,"teacher_disagreement_score":0.0019389985,"about_ca_system_score_codex":0.0001958481,"about_ca_system_score_gemma":0.00012387417,"threshold_uncertainty_score":0.0064865947},"labels":[],"label_agreement":null},{"id":"W3088923751","doi":"10.1158/2159-8290.cd-20-0461","title":"H3.3 G34W Promotes Growth and Impedes Differentiation of Osteoblast-Like Mesenchymal Progenitors in Giant Cell Tumor of Bone","year":2020,"lang":"en","type":"article","venue":"Cancer Discovery","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; Mount Sinai Hospital; McGill University; McGill University Health Centre; McGill Genome Centre; Montreal Neurological Institute and Hospital; University of Toronto; Jewish General Hospital; McGill University and Génome Québec Innovation Centre; Institute for Research in Immunology and Cancer; Université de Montréal; Hospital for Sick Children","funders":"Natural Sciences and Engineering Research Council of Canada; National Center for Research Resources; Terry Fox Research Institute; Canadian Institutes of Health Research; Government of Ontario; National Cancer Institute; National Institutes of Health; Cancer Prevention and Research Institute of Texas","keywords":"Biology; Progenitor cell; Cell biology; Osteoblast; Mesenchymal stem cell; Cancer research; Population; Tumor microenvironment; Cellular differentiation; Epigenetics; Epigenome; Stem cell; DNA methylation; Genetics; Gene expression; Medicine","score_opus":0.009402858322339565,"score_gpt":0.22064879017438724,"score_spread":0.21124593185204768,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3088923751","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969252,0.0003095511,0.0018086487,0.00009445323,0.000019289591,0.000019044162,0.0002938913,0.00009866495,0.0004312227],"genre_scores_gemma":[0.99825937,0.00009980925,0.0006179171,0.00006172442,0.0000024681221,0.000012585112,0.0002277037,0.00001972637,0.00069867336],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999124,0.0000082434635,0.000005898978,0.000018945244,0.000030651237,0.000023941566],"domain_scores_gemma":[0.99992645,0.0000064929663,0.000029183191,0.0000066673097,0.00000665675,0.000024554634],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007326672,0.00017399648,0.00011818915,0.00013362576,0.00015054099,0.00015079342,0.00012270348,0.0001980854,0.001097722],"category_scores_gemma":[0.000080977836,0.00010462476,0.00016190557,0.00010795563,0.00020443107,0.00005790124,0.00018957347,0.000327235,0.0002951746],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005399125,0.0000112620355,0.00047560513,0.000009818894,0.0000039168913,0.000055308526,0.0000051407133,0.000051559065,0.99886227,0.0000256047,0.000048890946,0.00039667267],"study_design_scores_gemma":[0.00003482415,0.00029569803,0.022560146,0.0000052819096,0.000024016395,0.0009469757,0.00007506902,0.001971934,0.97149897,0.00012261597,0.0024576166,0.0000068765485],"about_ca_topic_score_codex":0.0012013442,"about_ca_topic_score_gemma":0.002238687,"teacher_disagreement_score":0.0012013442,"about_ca_system_score_codex":0.0001998358,"about_ca_system_score_gemma":0.0001983222,"threshold_uncertainty_score":0.0036721826},"labels":[],"label_agreement":null},{"id":"W3090487813","doi":"10.3389/fimmu.2020.571334","title":"Cutibacterium acnes Infection Induces Type I Interferon Synthesis Through the cGAS-STING Pathway","year":2020,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Queen's University; Austrian Science Fund","keywords":"Propionibacterium acnes; Inflammasome; Proinflammatory cytokine; Interferon; Inflammation; Signal transduction; TRIF; Microbiology; Immunology; AIM2; Biology; Cancer research; Medicine; Acne; Innate immune system; Immune system; Cell biology; Toll-like receptor","score_opus":0.022536104069116755,"score_gpt":0.23818996935597106,"score_spread":0.21565386528685432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3090487813","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98438346,0.0048517897,0.005150019,0.00051334006,0.00016613884,0.00008284249,0.00095101877,0.00022265379,0.003678733],"genre_scores_gemma":[0.9941964,0.0013126439,0.002138966,0.00015401393,0.00003298067,0.000047222624,0.0006211973,0.000011607307,0.0014850724],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999824,0.00004171313,0.000018288318,0.000026810245,0.000030864936,0.000058396057],"domain_scores_gemma":[0.9999167,0.000018213635,0.000023701654,0.000011153996,0.000011078082,0.000019124807],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016374505,0.00040363544,0.00022453109,0.00023097775,0.00012634271,0.0003110129,0.000080540405,0.0002728379,0.0017211894],"category_scores_gemma":[0.0001247253,0.00007397149,0.0003324182,0.00010411937,0.00018393024,0.00020743879,0.00026898988,0.00055191363,0.00045225528],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003126068,0.000034161163,0.00045196284,0.00008350763,0.0000048453007,0.00009710483,0.000018212775,0.000053118605,0.9966449,0.00009156355,0.00008936302,0.0021184974],"study_design_scores_gemma":[0.000056250024,0.0005268391,0.014672277,0.000034711193,0.000020503663,0.00050059665,0.00011794094,0.0015245373,0.9774311,0.00024733163,0.0048604663,0.0000074344803],"about_ca_topic_score_codex":0.0003270669,"about_ca_topic_score_gemma":0.0003657014,"teacher_disagreement_score":0.0017211894,"about_ca_system_score_codex":0.0002698854,"about_ca_system_score_gemma":0.00023274185,"threshold_uncertainty_score":0.0057579875},"labels":[],"label_agreement":null},{"id":"W3093216561","doi":"10.1186/s13567-020-00856-z","title":"Analysis of the microRNA expression profiles of chicken dendritic cells in response to H9N2 avian influenza virus infection","year":2020,"lang":"en","type":"article","venue":"Veterinary Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Natural Science Foundation of China; Jiangsu Agricultural Science and Technology Innovation Fund","keywords":"Biology; microRNA; Virus; Host (biology); Virology; Deep sequencing; Influenza A virus; Endocytosis; Cell biology; Gene; Receptor; Genetics; Genome","score_opus":0.0873215528389225,"score_gpt":0.3702170912916135,"score_spread":0.282895538452691,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3093216561","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964706,0.0005650156,0.001401481,0.000023260562,0.000011863089,0.0000135788205,0.00074422546,0.000012055009,0.00075795216],"genre_scores_gemma":[0.99329454,0.00046620326,0.003603574,0.00006912154,0.000006035178,0.000040265288,0.0013484302,0.000014011415,0.0011577617],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990666,0.000007704665,0.0000064200894,0.000037548954,0.000021394095,0.00002026151],"domain_scores_gemma":[0.999941,0.000012632957,0.000012741611,0.0000041709322,0.000017714317,0.000011707701],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009948202,0.00012742606,0.00019743167,0.00021961976,0.0001508134,0.00025710472,0.000061133134,0.00016973575,0.0003590139],"category_scores_gemma":[0.00013591342,0.00011104914,0.00015806215,0.0001432268,0.00012110423,0.00010674405,0.0001388298,0.0002221885,0.00015597031],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016575307,0.000007033492,0.00663931,0.000031680538,0.000011450263,0.000048714024,0.00005573555,0.00006515009,0.9910405,0.000026019394,0.000037902828,0.0018706551],"study_design_scores_gemma":[0.00001918473,0.0003861858,0.39282617,0.000020820815,0.00010263896,0.0008007971,0.0005045225,0.005288334,0.595786,0.00011849995,0.0041196076,0.000027346558],"about_ca_topic_score_codex":0.0007603735,"about_ca_topic_score_gemma":0.0014259809,"teacher_disagreement_score":0.0007603735,"about_ca_system_score_codex":0.0001419313,"about_ca_system_score_gemma":0.00010457469,"threshold_uncertainty_score":0.0015118718},"labels":[],"label_agreement":null},{"id":"W3094768285","doi":"10.30699/mmlj17.3.1.74","title":"The Interaction of Human Papilloma Virus Oncoproteins (E6,E7) and Retinoblastoma Protein (pRb) in AngiogenesisRegulation","year":2020,"lang":"en","type":"article","venue":"Modern Medical Laboratory Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Retinoblastoma; Angiogenesis; Human papilloma virus; Retinoblastoma protein; Cancer research; Papilloma; Biology; Medicine; Cancer; Pathology; Cell cycle; Genetics; Gene","score_opus":0.01243053749128865,"score_gpt":0.2570681636908783,"score_spread":0.24463762619958968,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3094768285","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96220225,0.023836412,0.004315874,0.0004868137,0.000070913695,0.00002713353,0.00012417193,0.000048040667,0.008888372],"genre_scores_gemma":[0.99107647,0.003799133,0.0009765764,0.000047558842,0.000022936383,0.000013787966,0.0001258088,0.0000071108107,0.003930636],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997031,0.000096112075,0.000010843556,0.000032891272,0.00005617133,0.00010082579],"domain_scores_gemma":[0.99987733,0.000035105215,0.000018036733,0.000009058651,0.00002710502,0.00003347853],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034469034,0.000264996,0.0002121955,0.0004191757,0.00045943705,0.0006207388,0.00025615856,0.0004568715,0.001297584],"category_scores_gemma":[0.00019458572,0.00017960827,0.0003627951,0.00019238648,0.00041614406,0.0005124027,0.00038802356,0.0005315403,0.00044897935],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000766828,0.00012121341,0.0036914349,0.00009372758,0.000027207227,0.0005153324,0.00008872401,0.0001529402,0.98228306,0.0034471937,0.00017027349,0.008642096],"study_design_scores_gemma":[0.00003141383,0.00042563578,0.04266403,0.000025040059,0.000053625976,0.0016336287,0.00032273176,0.0021200841,0.9413126,0.0013546752,0.010039498,0.000017000639],"about_ca_topic_score_codex":0.0008324918,"about_ca_topic_score_gemma":0.0006158254,"teacher_disagreement_score":0.001297584,"about_ca_system_score_codex":0.0005177561,"about_ca_system_score_gemma":0.00031924195,"threshold_uncertainty_score":0.004340887},"labels":[],"label_agreement":null},{"id":"W3095224402","doi":"10.1002/2211-5463.13030","title":"IFI44L expression is regulated by IRF‐1 and HIV‐1","year":2020,"lang":"en","type":"article","venue":"FEBS Open Bio","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Natural Science Foundation of China","keywords":"Promoter; Transcription factor; Transcription (linguistics); Interferon; Biology; Transfection; Innate immune system; Response element; Gene; Interferon regulatory factors; Molecular biology; clone (Java method); Cell biology; Gene expression; Immune system; Genetics","score_opus":0.021026148737596086,"score_gpt":0.2580289292753601,"score_spread":0.237002780537764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3095224402","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99396,0.0012239238,0.0018086445,0.00024512122,0.000034354787,0.000017921135,0.0002752379,0.00006625306,0.0023685168],"genre_scores_gemma":[0.9938212,0.0003415804,0.001789341,0.00009376263,0.000012582947,0.00003973701,0.00072157744,0.000017416776,0.0031628388],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997434,0.000049461716,0.000012649628,0.000038555263,0.000054396267,0.000101543934],"domain_scores_gemma":[0.9998611,0.000023573226,0.00004717323,0.000014971255,0.000022063246,0.000031121435],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018222025,0.00022085849,0.00016754199,0.0003411789,0.000287918,0.00040911286,0.00013918849,0.00038050397,0.0017233349],"category_scores_gemma":[0.00025358927,0.00019760567,0.00035113888,0.0001536617,0.0003204947,0.00028153064,0.00036200412,0.00051509554,0.00074604],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012930852,0.000027570102,0.0009855815,0.000021859305,0.0000023957373,0.0000809917,0.00003294477,0.00003531274,0.99698025,0.0002040867,0.00010630971,0.0013934044],"study_design_scores_gemma":[0.000040905827,0.00023587319,0.06030097,0.000033781005,0.00001531577,0.0006130175,0.00026705232,0.0038179387,0.92850983,0.0004818834,0.0056664953,0.000016912642],"about_ca_topic_score_codex":0.00034758516,"about_ca_topic_score_gemma":0.0003910051,"teacher_disagreement_score":0.0017233349,"about_ca_system_score_codex":0.00048319157,"about_ca_system_score_gemma":0.00026544585,"threshold_uncertainty_score":0.0057651997},"labels":[],"label_agreement":null},{"id":"W3095613676","doi":"10.1074/jbc.ra120.015775","title":"The noncoding RNA BC200 associates with polysomes to positively regulate mRNA translation in tumor cells","year":2020,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Cancer Society Research Institute; Canadian Institutes of Health Research","keywords":"Biology; Polysome; Gene knockdown; Translation (biology); Transfection; RNA; Molecular biology; Messenger RNA; Ribosome; Cell biology; Cell culture; Gene; Genetics","score_opus":0.020712974339526586,"score_gpt":0.23568217862567695,"score_spread":0.21496920428615035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3095613676","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97900414,0.0024662295,0.014458735,0.0001507185,0.00003679491,0.000055548277,0.0006700089,0.00025509452,0.0029026868],"genre_scores_gemma":[0.9843778,0.0010965905,0.008522543,0.00012798826,0.000014474141,0.000047933027,0.0013488339,0.00006800706,0.004395793],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986887,0.00001428318,0.000009030266,0.000032324657,0.000058452733,0.000017092496],"domain_scores_gemma":[0.999897,0.000019165474,0.0000243066,0.00001601381,0.000019302348,0.000024179464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011384077,0.0002692642,0.00018374989,0.00020414044,0.00018407237,0.0002618221,0.00013494141,0.00017928182,0.000827015],"category_scores_gemma":[0.00010536556,0.00015049636,0.00019451337,0.00022787463,0.00018459579,0.0001461799,0.00017181497,0.00033852487,0.00048294317],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011380705,0.00000214698,0.00006113329,0.0000068267204,7.600153e-7,0.000008043535,0.000003187504,0.00001604638,0.99956006,0.000026890502,0.000010517434,0.0002929429],"study_design_scores_gemma":[0.0000033091028,0.000057203193,0.005251218,0.000002465252,0.000004799157,0.00007903864,0.000011289809,0.0008316736,0.9920033,0.000032315613,0.0017205302,0.0000028620561],"about_ca_topic_score_codex":0.00079937367,"about_ca_topic_score_gemma":0.0020897198,"teacher_disagreement_score":0.000827015,"about_ca_system_score_codex":0.0004070365,"about_ca_system_score_gemma":0.00023891727,"threshold_uncertainty_score":0.002953291},"labels":[],"label_agreement":null},{"id":"W3097251555","doi":"10.1101/2020.10.28.20221804","title":"A catalog of associations between rare coding variants and COVID-19 outcomes","year":2020,"lang":"en","type":"preprint","venue":"medRxiv","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"National Center for Advancing Translational Sciences; Canadian Institutes of Health Research; Perelman School of Medicine, University of Pennsylvania; Medical Research Council; Jewish General Hospital; National Institutes of Health; Japan Society for the Promotion of Science; Cancer Research UK; Fonds de Recherche du Québec - Santé; University of Pennsylvania Health System; Georgia Clinical and Translational Science Alliance; University of Pennsylvania","keywords":"Coronavirus disease 2019 (COVID-19); Genome-wide association study; Gene; Exome; Coronavirus; Disease; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Biology; Medicine; Genetics; Single-nucleotide polymorphism; Exome sequencing; Infectious disease (medical specialty); Internal medicine; Genotype; Mutation","score_opus":0.06436717300087642,"score_gpt":0.32299131460498065,"score_spread":0.25862414160410424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3097251555","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4875093,0.020439107,0.0060517737,0.0010381106,0.00018644382,0.00006831897,0.47210124,0.0011643076,0.011441328],"genre_scores_gemma":[0.37982515,0.01382321,0.008905149,0.00071206107,0.00033644013,0.00023881215,0.59139204,0.00054156437,0.004225581],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998889,0.0001534967,0.00022512068,0.00040496822,0.0002463248,0.00008095298],"domain_scores_gemma":[0.9945115,0.0027867246,0.001044749,0.0009441516,0.00039203136,0.00032081545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012951808,0.0005149723,0.0008589624,0.0046511986,0.00043421928,0.0011417167,0.00043864248,0.00047512137,0.01149309],"category_scores_gemma":[0.006047298,0.00023065554,0.0007811513,0.0057405843,0.00020844003,0.00038633344,0.0007549447,0.00040704428,0.0029284982],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021601398,0.000095761374,0.7164097,0.0030715312,0.002618867,0.0022565369,0.00053503533,0.0010164076,0.018251935,0.0028881622,0.07485702,0.17583886],"study_design_scores_gemma":[0.00022768497,0.0002508603,0.87314004,0.0008294417,0.0012547096,0.0058114533,0.00024091342,0.0006132141,0.0030240908,0.0042298334,0.110299125,0.00007859604],"about_ca_topic_score_codex":0.0013013546,"about_ca_topic_score_gemma":0.0020882455,"teacher_disagreement_score":0.01149309,"about_ca_system_score_codex":0.0001886747,"about_ca_system_score_gemma":0.0005157229,"threshold_uncertainty_score":0.038448215},"labels":[],"label_agreement":null},{"id":"W3099961819","doi":"10.1101/163360","title":"DUSP1 regulates apoptosis and cell migration, but not the JIP1-protected cytokine response, during Respiratory Syncytial Virus and Sendai Virus infection","year":2017,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Université de Montréal; Institut National de la Santé et de la Recherche Médicale","keywords":"Sendai virus; Biology; Virus; Dephosphorylation; Viral replication; Phosphorylation; Virology; p38 mitogen-activated protein kinases; Phosphatase; Apoptosis; Interferon; Protein kinase R; Cell biology; Protein kinase A; Mitogen-activated protein kinase kinase; Biochemistry","score_opus":0.012301174752339899,"score_gpt":0.21747919211134964,"score_spread":0.20517801735900973,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3099961819","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99495655,0.0031710756,0.0008364896,0.00007548007,0.00002558966,0.000014442172,0.00029109584,0.000030300527,0.0005990295],"genre_scores_gemma":[0.9962626,0.0009333189,0.0007418574,0.000047488127,0.000013388192,0.000032372853,0.0004972019,0.000007993928,0.001463717],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988675,0.000021805907,0.000009120595,0.000022465532,0.000021833439,0.00003792818],"domain_scores_gemma":[0.999943,0.000005919362,0.000016701066,0.0000049492332,0.000008497535,0.000020999354],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015066766,0.0002774627,0.00020169395,0.00015968505,0.00015249357,0.00018029187,0.00011174778,0.00024245813,0.0007970109],"category_scores_gemma":[0.00008920435,0.000117005664,0.00019540417,0.00009634704,0.00021960135,0.0001859059,0.00016208892,0.00043834298,0.00027196502],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016257243,0.000017779312,0.00023373686,0.000038000813,0.0000033776535,0.000036357964,0.000012828523,0.000024336412,0.9988813,0.000033353957,0.000028997605,0.0005274663],"study_design_scores_gemma":[0.000030872958,0.00056088064,0.05120361,0.000011758104,0.000021631993,0.00047342296,0.00010525588,0.0012562551,0.94406676,0.0000835076,0.0021798185,0.00000621148],"about_ca_topic_score_codex":0.00029884465,"about_ca_topic_score_gemma":0.00040013477,"teacher_disagreement_score":0.0007970109,"about_ca_system_score_codex":0.00019572041,"about_ca_system_score_gemma":0.00011420088,"threshold_uncertainty_score":0.002666235},"labels":[],"label_agreement":null},{"id":"W3101414512","doi":"10.1093/femsre/fuaa059","title":"Zinc finger proteins in the host-virus interplay: multifaceted functions based on their nucleic acid-binding property","year":2020,"lang":"en","type":"review","venue":"FEMS Microbiology Reviews","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Science Foundation of Fujian Province; National Science and Technology Program during the Twelfth Five-year Plan Period; National Natural Science Foundation of China","keywords":"Zinc finger; Nucleic acid; Biology; Host (biology); Virus; Computational biology; Virology; Biochemistry; Genetics; Gene; Transcription factor","score_opus":0.05883037048737342,"score_gpt":0.3053526819382131,"score_spread":0.24652231145083967,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3101414512","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021263721,0.9975655,0.00022808663,0.00023679965,0.00016769333,0.0000035446412,0.000016573813,0.0000122532065,0.0015569162],"genre_scores_gemma":[0.001282498,0.9968694,0.00031724488,0.00013846575,0.00018024065,0.000005565888,0.000036004425,0.0000019496485,0.0011686342],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999038,0.000014045972,0.000010664214,0.000018071334,0.00003690105,0.000016529473],"domain_scores_gemma":[0.99992085,0.000030262892,0.000014241361,0.0000027265842,0.000017304477,0.000014695827],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026720346,0.00063433306,0.00078834814,0.0013409384,0.00022338123,0.00083527097,0.00049268437,0.00067491055,0.0030250293],"category_scores_gemma":[0.0002330063,0.00015822063,0.0002760013,0.0016453156,0.00033164362,0.0009899635,0.00061936834,0.0010288238,0.0023157012],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057381723,0.00003257548,0.00016825215,0.006924462,0.000039045754,0.00018245669,0.000071217786,0.00024644798,0.0062335883,0.0053303046,0.019386202,0.961328],"study_design_scores_gemma":[0.000005831465,0.000049228074,0.0005881393,0.0011313764,0.000034227593,0.0009167671,0.000050519346,0.00006177182,0.00083996885,0.002030946,0.99428105,0.000010131001],"about_ca_topic_score_codex":0.00046550273,"about_ca_topic_score_gemma":0.000654525,"teacher_disagreement_score":0.0030250293,"about_ca_system_score_codex":0.000466375,"about_ca_system_score_gemma":0.00060673227,"threshold_uncertainty_score":0.010119736},"labels":[],"label_agreement":null},{"id":"W3102021866","doi":"10.1101/2020.06.18.158154","title":"Experimental and natural evidence of SARS-CoV-2 infection-induced activation of type I interferon responses","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; Mount Sinai Hospital; Sunnybrook Health Science Centre; St. Michael's Hospital; Vector Institute; Sunnybrook Hospital; University of Waterloo; McMaster University Medical Centre; University Health Network; Hamilton Health Sciences; University of Toronto; McMaster University; University of British Columbia","funders":"Canadian Institutes of Health Research; Zhejiang University; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; McMaster University","keywords":"Interferon; Biology; In vitro; Virology; Immunology; Interferon type I; Stimulation; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Severe acute respiratory syndrome coronavirus; Virus; Coronavirus disease 2019 (COVID-19); Medicine; Genetics; Neuroscience; Internal medicine; Disease","score_opus":0.04777774005929896,"score_gpt":0.29852527613744106,"score_spread":0.2507475360781421,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3102021866","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96552634,0.0061389054,0.007103271,0.00066676317,0.00020702126,0.00011963408,0.0019643842,0.00015578084,0.018117797],"genre_scores_gemma":[0.98864496,0.0019497651,0.0035321293,0.00024194104,0.00010888688,0.0000919607,0.0019956464,0.000018271125,0.003416406],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996449,0.00011613213,0.000035474615,0.0000588318,0.0000855858,0.000059032434],"domain_scores_gemma":[0.9995115,0.00017941976,0.00008144061,0.00012432429,0.000045879377,0.00005740225],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061098265,0.00030211615,0.0001328429,0.00032283823,0.00021558756,0.00019610953,0.00016450796,0.0003153419,0.0067800926],"category_scores_gemma":[0.00031860618,0.00008917127,0.00029331216,0.00014588135,0.0005910624,0.0001606815,0.00019602988,0.00059475395,0.0010567558],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004689125,0.00014163207,0.0019195266,0.00014042645,0.000014310089,0.00014538706,0.000020601732,0.00004281119,0.9941361,0.00065799046,0.00023273655,0.0020795201],"study_design_scores_gemma":[0.00006865891,0.001647283,0.017719641,0.00004898766,0.000028762759,0.0024350206,0.000088869034,0.00039901902,0.9691237,0.0007071227,0.007723616,0.000009266187],"about_ca_topic_score_codex":0.00020683797,"about_ca_topic_score_gemma":0.00024690825,"teacher_disagreement_score":0.0067800926,"about_ca_system_score_codex":0.00023849211,"about_ca_system_score_gemma":0.00027094374,"threshold_uncertainty_score":0.022681653},"labels":[],"label_agreement":null},{"id":"W3103922824","doi":"10.1016/j.freeradbiomed.2020.10.309","title":"Inhibition of the STING-mediated Interferon Response by Novel Oxidative Posttranslational Modification","year":2020,"lang":"en","type":"article","venue":"Free Radical Biology and Medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Sting; Oxidative phosphorylation; Interferon; Oxidative stress; Chemistry; Medicine; Pharmacology; Immunology; Biochemistry; Physics","score_opus":0.029630731980078828,"score_gpt":0.27967388398059106,"score_spread":0.25004315200051225,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3103922824","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98626095,0.0024830773,0.007957617,0.00028030173,0.00011986977,0.000067130386,0.00013519995,0.00009736481,0.0025984794],"genre_scores_gemma":[0.9945471,0.0010185229,0.0027903202,0.000074798925,0.000031047628,0.00002194542,0.00011316607,0.000010380974,0.0013927319],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99994254,0.000009586212,0.000004641924,0.000010838491,0.000012300127,0.000020061883],"domain_scores_gemma":[0.99993074,0.000010465833,0.000023365854,0.000011355919,0.000009837293,0.000014130082],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021220055,0.00033213722,0.00014637111,0.00011219461,0.00015313835,0.00019697267,0.00023381859,0.00027431367,0.0013890226],"category_scores_gemma":[0.00012781376,0.00009044687,0.00026925368,0.00007514294,0.00019377883,0.0002303815,0.00015077658,0.0005637562,0.00017157497],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003280662,0.000075227304,0.000101437385,0.000038211034,0.000009820726,0.000048679703,0.000013120545,0.00011585816,0.9953891,0.00052572123,0.000056604076,0.0032981304],"study_design_scores_gemma":[0.0000406032,0.0004391055,0.0007589664,0.0000050090584,0.000012985919,0.00008232463,0.0000060259595,0.0005689212,0.9962603,0.00012028771,0.0017008595,0.0000046510017],"about_ca_topic_score_codex":0.00023804005,"about_ca_topic_score_gemma":0.00047016825,"teacher_disagreement_score":0.0013890226,"about_ca_system_score_codex":0.00023085753,"about_ca_system_score_gemma":0.00021414222,"threshold_uncertainty_score":0.004646778},"labels":[],"label_agreement":null},{"id":"W3104453027","doi":"10.1101/2020.10.12.336487","title":"Viral protein engagement of GBF1 induces host cell vulnerability through synthetic lethality","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"Canadian Institutes of Health Research; National Institutes of Health","keywords":"Synthetic lethality; Poliovirus; Lethality; Virology; Biology; Function (biology); Viral protein; Mutation; Host (biology); Nuclear transport; RNA; Virus; Cell biology; Cancer cell; Cancer; DNA; Genetics; Cell nucleus; Gene; DNA repair","score_opus":0.028418042358679153,"score_gpt":0.2490698511815921,"score_spread":0.22065180882291296,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3104453027","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98813874,0.0010005957,0.0062606097,0.00030685362,0.00006211652,0.00003376367,0.0004605008,0.00018187515,0.003554896],"genre_scores_gemma":[0.9936103,0.00039549152,0.0022270374,0.00012779322,0.000009689658,0.00003422144,0.00051075575,0.0000365196,0.0030480854],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998592,0.000023936389,0.000010081022,0.000023113575,0.00005089015,0.00003264047],"domain_scores_gemma":[0.9999343,0.000014681387,0.000017660828,0.000011720862,0.000005503494,0.000016114187],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016908509,0.0004072989,0.00017013418,0.0001890264,0.00012258618,0.0002742551,0.00013788913,0.0003364718,0.0016062135],"category_scores_gemma":[0.00009390444,0.00010926534,0.00018993551,0.00009949976,0.0002607733,0.00014104143,0.00035045863,0.00069837715,0.0003995034],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003368685,0.000008460055,0.00009628007,0.00001297303,0.0000023682219,0.000029951538,0.0000047726294,0.000040773768,0.99894196,0.00014215722,0.000054801316,0.00063174876],"study_design_scores_gemma":[0.000006465891,0.00007690752,0.0010272576,0.0000019506922,0.0000032819646,0.00020009796,0.000008392131,0.0005391173,0.99603987,0.000055255172,0.0020395848,0.0000019008397],"about_ca_topic_score_codex":0.00024221274,"about_ca_topic_score_gemma":0.0003377992,"teacher_disagreement_score":0.0016062135,"about_ca_system_score_codex":0.0002515254,"about_ca_system_score_gemma":0.0001370285,"threshold_uncertainty_score":0.0053733587},"labels":[],"label_agreement":null},{"id":"W3104601890","doi":"10.2174/0929867327999201113100918","title":"Multifunctional RNase MCPIP1 and its Role in Cardiovascular Diseases","year":2020,"lang":"en","type":"review","venue":"Current Medicinal Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Libin Cardiovascular Institute of Alberta; University of Calgary","funders":"","keywords":"RNase P; Chemistry; Medicine; Computational biology; Biochemistry; Biology; RNA","score_opus":0.027255992040645,"score_gpt":0.29698801549597403,"score_spread":0.26973202345532904,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3104601890","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00017994086,0.99886924,0.00008341558,0.00015058355,0.00013349185,0.000002296289,0.000010134612,0.0000050777912,0.0005658655],"genre_scores_gemma":[0.0012631123,0.9976342,0.0001453882,0.00013412679,0.00019993604,0.0000037396558,0.000026513113,0.0000010434425,0.0005919558],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999169,0.000013764263,0.000011585412,0.000015535079,0.000029507743,0.000012661286],"domain_scores_gemma":[0.9999163,0.000028290617,0.000015860489,0.0000024800563,0.000023824656,0.000013158342],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002623721,0.0006027202,0.00069749745,0.0011848531,0.00017736285,0.00051736983,0.0003982281,0.0006071146,0.00248061],"category_scores_gemma":[0.0002629832,0.00017386976,0.00023831142,0.0013593412,0.00029323497,0.0007727473,0.00043472848,0.0010683241,0.0013564503],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012600118,0.000069104404,0.00023560446,0.013618579,0.00007534494,0.0002775707,0.000061456405,0.00038954863,0.0060254233,0.003541461,0.023898467,0.9516814],"study_design_scores_gemma":[0.000019624862,0.00011960162,0.001330669,0.0014217444,0.00008854045,0.0017944103,0.00004168939,0.00013240763,0.0012187806,0.001539787,0.99227506,0.000017797125],"about_ca_topic_score_codex":0.00047914946,"about_ca_topic_score_gemma":0.0007678918,"teacher_disagreement_score":0.00248061,"about_ca_system_score_codex":0.0003546422,"about_ca_system_score_gemma":0.0007025653,"threshold_uncertainty_score":0.008298397},"labels":[],"label_agreement":null},{"id":"W3107386010","doi":"10.1016/j.isci.2020.101864","title":"Virus-Intrinsic Differences and Heterogeneous IRF3 Activation Influence IFN-Independent Antiviral Protection","year":2020,"lang":"en","type":"article","venue":"iScience","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"IRF3; Sendai virus; Interferon; Population; Downregulation and upregulation; Virology; Virus; Biology; Priming (agriculture); Viral replication; Interferon regulatory factors; Innate immune system; Immunology; Cell biology; Immune system; Gene; Genetics; Medicine","score_opus":0.021772546631011965,"score_gpt":0.237016336024675,"score_spread":0.21524378939366304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3107386010","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980217,0.00034846802,0.00077742717,0.000015207005,0.000009422814,0.00000517926,0.00006459616,0.000011760189,0.0007462959],"genre_scores_gemma":[0.9993273,0.00008406371,0.00023944871,0.00001093835,0.0000033964336,0.000004154319,0.000065777225,0.000005473493,0.00025950477],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984694,0.000024593855,0.000010249029,0.000033660282,0.000026277301,0.000058271286],"domain_scores_gemma":[0.999912,0.000025229801,0.000015885824,0.000016606622,0.000009921554,0.000020338788],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014908123,0.0001600889,0.00016238284,0.0001187925,0.00010407877,0.00029780567,0.00010458646,0.00022474292,0.0013288498],"category_scores_gemma":[0.00015584602,0.00009431617,0.00020150884,0.00006729902,0.00019298891,0.00020550712,0.00019567432,0.00043529226,0.0002463897],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000713904,0.000010947717,0.0005694902,0.000007810532,0.0000020415466,0.000011758994,0.000006968841,0.000026278218,0.99871814,0.00007364871,0.0000074532877,0.00049415114],"study_design_scores_gemma":[0.0000105328545,0.00019803845,0.027850218,0.000005448533,0.000018544306,0.0003188122,0.00007434067,0.0010590272,0.9692599,0.00018134838,0.0010181207,0.000005682027],"about_ca_topic_score_codex":0.00015338855,"about_ca_topic_score_gemma":0.00019389657,"teacher_disagreement_score":0.0013288498,"about_ca_system_score_codex":0.00018658426,"about_ca_system_score_gemma":0.00009891475,"threshold_uncertainty_score":0.004445493},"labels":[],"label_agreement":null},{"id":"W3107881077","doi":"10.1016/j.seizure.2020.11.019","title":"The epileptology of Aicardi-Goutières syndrome: electro-clinical-radiological findings","year":2020,"lang":"en","type":"article","venue":"Seizure","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University; Montreal Neurological Institute and Hospital","funders":"Ministero della Salute","keywords":"Radiological weapon; Medicine; Psychology; Radiology","score_opus":0.024578513401884734,"score_gpt":0.28004144822686095,"score_spread":0.25546293482497623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3107881077","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95281327,0.0072488035,0.0032967145,0.004493372,0.0003356465,0.00025403503,0.0003860925,0.00019591814,0.030976074],"genre_scores_gemma":[0.9971306,0.00083914923,0.0004035893,0.00060620747,0.0002516688,0.000019090297,0.00007737516,0.000007992786,0.000664451],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.99978894,0.000044997356,0.000031520412,0.000035306777,0.000032614713,0.00006661896],"domain_scores_gemma":[0.99889755,0.00055974553,0.00014331119,0.00007676325,0.0000830646,0.0002394188],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028238035,0.0014552666,0.0006174263,0.0016211801,0.00067986886,0.00041008962,0.00056555914,0.0020230254,0.0028133097],"category_scores_gemma":[0.0021967564,0.0003644283,0.00046856364,0.0007548112,0.0015623538,0.0011025403,0.0005387761,0.0015298722,0.00059495925],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024775832,0.000079202975,0.03770579,0.000070568705,0.000038751154,0.9533262,0.00016741831,0.00019767,0.003931068,0.00043938437,0.00055946334,0.0032367136],"study_design_scores_gemma":[0.00009151023,0.00021305619,0.062411197,0.000036842892,0.00005641084,0.93272245,0.0002105686,0.00081548956,0.0014596862,0.0009276013,0.0010321514,0.00002307397],"about_ca_topic_score_codex":0.003012239,"about_ca_topic_score_gemma":0.0018766446,"teacher_disagreement_score":0.003012239,"about_ca_system_score_codex":0.0004988653,"about_ca_system_score_gemma":0.0006851821,"threshold_uncertainty_score":0.009411454},"labels":[],"label_agreement":null},{"id":"W3107982397","doi":"10.3390/ijms21228877","title":"The Impact of Radiation-Induced DNA Damage on cGAS-STING-Mediated Immune Responses to Cancer","year":2020,"lang":"en","type":"review","venue":"International Journal of Molecular Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":218,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Li Ka Shing Institute of Virology, University of Alberta; University of Alberta; Government of Alberta","keywords":"Immune system; Stimulator of interferon genes; Cancer research; DNA damage; Sting; Radiation therapy; Innate immune system; Immunogenic cell death; Context (archaeology); Cancer; Signal transduction; Immunotherapy; Immunology; Biology; Medicine; Cell biology; DNA; Internal medicine; Genetics","score_opus":0.0403741128775902,"score_gpt":0.390435130168848,"score_spread":0.3500610172912578,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3107982397","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5259503,0.43802896,0.013083574,0.0019433027,0.00063625386,0.00020916526,0.0005666931,0.00031351307,0.019268218],"genre_scores_gemma":[0.83500075,0.15157464,0.005024113,0.00081256736,0.00030789035,0.0001037642,0.0005463801,0.000030835003,0.006599102],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998747,0.00003331166,0.000010943381,0.000014370118,0.00003667467,0.000029882794],"domain_scores_gemma":[0.9999176,0.000021399146,0.00002448247,0.0000048479897,0.00001692534,0.000014806621],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022584187,0.0003096909,0.00022138114,0.00029681498,0.00014184743,0.0003296319,0.0001584137,0.00029189693,0.0014178461],"category_scores_gemma":[0.00016686744,0.00008182072,0.00031157056,0.00013689829,0.00018530773,0.0003063421,0.00023481545,0.0005709983,0.0003032809],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041214118,0.000119081684,0.0018271117,0.0017899369,0.000063489584,0.00032472008,0.00013117975,0.00079709344,0.8851993,0.0021127965,0.0010607534,0.1061623],"study_design_scores_gemma":[0.00003642377,0.0036386,0.02495799,0.00036512405,0.00020950961,0.0019994034,0.00020769729,0.0015773652,0.8668258,0.0019276933,0.09822132,0.000033079443],"about_ca_topic_score_codex":0.00017378789,"about_ca_topic_score_gemma":0.00036855342,"teacher_disagreement_score":0.0014178461,"about_ca_system_score_codex":0.00027685758,"about_ca_system_score_gemma":0.00033182386,"threshold_uncertainty_score":0.004743159},"labels":[],"label_agreement":null},{"id":"W3108022909","doi":"10.1002/adhm.202001056","title":"Amphiphilic Polyelectrolyte Graft Copolymers Enhance the Activity of Cyclic Dinucleotide STING Agonists","year":2020,"lang":"en","type":"article","venue":"Advanced Healthcare Materials","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Division of Chemical, Bioengineering, Environmental, and Transport Systems; National Institute of Diabetes and Digestive and Kidney Diseases; Entertainment Industry Foundation; Canadian Institutes of Health Research; Melanoma Research Alliance; American Association for Cancer Research; National Cancer Institute; National Institutes of Health; National Science Foundation","keywords":"Intracellular; Endosome; Cytosol; Copolymer; Ethylene glycol; Stimulator of interferon genes; Sting; Amphiphile; Drug carrier; Conjugate; In vivo; Drug delivery; PEG ratio; Polyelectrolyte; Biophysics; Chemistry; Polymer; Materials science; Nanotechnology; Biochemistry; Biology; Organic chemistry; Enzyme","score_opus":0.01728101584897586,"score_gpt":0.287560991936125,"score_spread":0.27027997608714915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3108022909","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945914,0.0008404225,0.0032280674,0.00003708387,0.0000079183765,0.00002125137,0.000032745756,0.000040380928,0.0012007277],"genre_scores_gemma":[0.9955178,0.00046227992,0.0030421643,0.000020244252,0.0000063589255,0.00001583569,0.00003568492,0.0000072784283,0.00089226814],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999474,0.000012349873,0.0000042457746,0.000010094505,0.000015516307,0.000010375454],"domain_scores_gemma":[0.99994373,0.000012160343,0.00002399567,0.0000034302407,0.000005624009,0.000011052496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010002689,0.00024381309,0.000086641056,0.0001432876,0.00005743035,0.00013354704,0.000055395554,0.0001289455,0.0004402454],"category_scores_gemma":[0.00010941997,0.000065070104,0.00007523572,0.000061183055,0.00010819813,0.00020130204,0.00011513608,0.00018502117,0.00012428922],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024897921,0.000009745778,0.000055679866,0.000010360633,9.581968e-7,0.000009868221,0.0000029971436,0.00008640528,0.99859995,0.00008438335,0.000008222153,0.001106513],"study_design_scores_gemma":[0.000005316477,0.0001225081,0.0004483146,0.0000017499992,0.0000031630302,0.00004032494,0.0000021846638,0.0008104847,0.9978703,0.000015107611,0.00067924865,0.0000011736116],"about_ca_topic_score_codex":0.00013073701,"about_ca_topic_score_gemma":0.0003084595,"teacher_disagreement_score":0.0004402454,"about_ca_system_score_codex":0.00017952095,"about_ca_system_score_gemma":0.000100455225,"threshold_uncertainty_score":0.0014727712},"labels":[],"label_agreement":null},{"id":"W3110432268","doi":"10.1074/jbc.ra120.015389","title":"An endogenous PI3K interactome promoting astrocyte-mediated neuroprotection identifies a novel association with RNA-binding protein ZC3H14","year":2020,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; Occupational Cancer Research Centre; University of Toronto; University Health Network","funders":"National Eye Institute; National Institute of General Medical Sciences; National Institute of Mental Health; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Neuroprotection; Interactome; PI3K/AKT/mTOR pathway; Cell biology; Biology; Astrocyte; RNA-binding protein; Signal transduction; Neuroscience; RNA; Biochemistry; Central nervous system","score_opus":0.02974474167459741,"score_gpt":0.23690282721602438,"score_spread":0.20715808554142695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3110432268","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99301344,0.0014187774,0.0032533177,0.00014179792,0.000024537721,0.00003121492,0.0011116788,0.00009058171,0.0009146501],"genre_scores_gemma":[0.99033594,0.0009352479,0.003548616,0.00016901486,0.000015405461,0.00004972503,0.0029054615,0.000028160872,0.0020124651],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989974,0.0000053179647,0.0000051831157,0.000027604305,0.00003298715,0.000029169474],"domain_scores_gemma":[0.99994624,0.0000054791603,0.000016360793,0.0000039968436,0.000010347279,0.000017599468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006858134,0.00033842082,0.00026846697,0.00035149523,0.00027962145,0.0002643472,0.00016188118,0.0002362403,0.0011270258],"category_scores_gemma":[0.00009177458,0.000111619025,0.0003684312,0.0002780527,0.00019074822,0.00011530298,0.00021923709,0.00035974797,0.00038007312],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012263733,0.000010578902,0.000604367,0.000029791267,0.000010033628,0.0000852034,0.000006210498,0.000023156434,0.9980611,0.000045006727,0.000055565506,0.0009462676],"study_design_scores_gemma":[0.000025434847,0.00012874624,0.043119628,0.000007639141,0.000043136148,0.00054672325,0.00003400133,0.0015716711,0.9518302,0.00009365524,0.002591754,0.000007528486],"about_ca_topic_score_codex":0.0012958113,"about_ca_topic_score_gemma":0.0023553618,"teacher_disagreement_score":0.0012958113,"about_ca_system_score_codex":0.00047890446,"about_ca_system_score_gemma":0.00035477913,"threshold_uncertainty_score":0.0037702918},"labels":[],"label_agreement":null},{"id":"W3111907072","doi":"10.1093/neuonc/noaa222.831","title":"TBIO-02. IMMUNE PROFILING OF RARE EMBRYONAL BRAIN TUMORS REVEAL EVIDENCE OF DYSREGULATED INTERFERON SIGNALLING AS A POTENTIAL DETERMINANT OF IMMUNOLOGICAL HETEROGENEITY","year":2020,"lang":"en","type":"article","venue":"Neuro-Oncology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; SickKids Foundation; Hospital for Sick Children","funders":"","keywords":"Biology; In silico; Immune system; Glioma; Epigenomics; Transcriptome; Immunotherapy; Tumor microenvironment; Computational biology; Cancer research; Immunology; DNA methylation; Genetics; Gene; Gene expression","score_opus":0.033377809654690664,"score_gpt":0.2987804849533806,"score_spread":0.26540267529868994,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3111907072","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99197525,0.000653638,0.0025435896,0.000065267835,0.000014121273,0.000027169568,0.0034705615,0.00010029505,0.0011502899],"genre_scores_gemma":[0.9860763,0.00037222818,0.0024335766,0.00015272353,0.0000065299173,0.00008295725,0.008922595,0.000062712534,0.0018902577],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99979395,0.000020297613,0.000011635493,0.00005029024,0.00007003074,0.00005374044],"domain_scores_gemma":[0.9998437,0.000027399865,0.000043957738,0.000014870391,0.000019791152,0.00005019983],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017131113,0.00017812602,0.00022388785,0.00033476207,0.0002358903,0.00037015486,0.00019733868,0.00023352628,0.0014598916],"category_scores_gemma":[0.00015428363,0.00010399058,0.00017625758,0.0002754101,0.00016877147,0.00008093221,0.00016631624,0.00053171563,0.00041796733],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002760067,0.000025984486,0.0050663133,0.000031773947,0.000014031314,0.000089553374,0.0000301117,0.000101986625,0.9922002,0.000049839113,0.00016032756,0.0019537942],"study_design_scores_gemma":[0.000035602316,0.0007540687,0.22159241,0.000018767078,0.000080190206,0.0021261598,0.00030031492,0.00337744,0.76279867,0.00026021662,0.008637575,0.00001859851],"about_ca_topic_score_codex":0.0009184136,"about_ca_topic_score_gemma":0.0017409059,"teacher_disagreement_score":0.0014598916,"about_ca_system_score_codex":0.00022687457,"about_ca_system_score_gemma":0.0001712912,"threshold_uncertainty_score":0.004883826},"labels":[],"label_agreement":null},{"id":"W3115597636","doi":"10.1158/2159-8290.cd-20-0387","title":"Metastasis and Immune Evasion from Extracellular cGAMP Hydrolysis","year":2020,"lang":"en","type":"article","venue":"Cancer Discovery","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":280,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; Medical Research Council; NIH Office of the Director; University of California, San Diego; Weill Cornell Medical College; Genentech; National Institutes of Health; Celgene; Queen's University; Queen's University Belfast; Academy of Medical Sciences; Cancer Research UK; Ludwig Institute for Cancer Research; Swim Across America; Parker Institute for Cancer Immunotherapy; Robertson Foundation; Francis Crick Institute; Burroughs Wellcome Fund; Prostate Cancer Foundation; Memorial Sloan-Kettering Cancer Center; Breast Cancer Research Foundation; Sanofi; AstraZeneca; Pfizer; Public Health Agency; Friends of the Cancer Centre; GlaxoSmithKline","keywords":"Immune system; Metastasis; Innate immune system; Cancer research; Biology; Immunotherapy; Extracellular; Inflammation; Cancer cell; Cancer immunotherapy; CCL18; Cancer; Cell biology; Immunology","score_opus":0.02133506582022331,"score_gpt":0.24298850477369002,"score_spread":0.2216534389534667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3115597636","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9830698,0.006087746,0.005640152,0.0004373617,0.000060800754,0.00001848705,0.00015366572,0.00008769991,0.0044443537],"genre_scores_gemma":[0.9953993,0.0010629677,0.0010220881,0.000042265703,0.000016525055,0.0000066176376,0.000112022295,0.00000810898,0.0023301875],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992836,0.000011136589,0.0000046848145,0.0000114384975,0.000027426919,0.000016974162],"domain_scores_gemma":[0.9999379,0.0000103588445,0.000025775134,0.0000059558893,0.000006552903,0.000013429832],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000105599815,0.00024985924,0.00012209214,0.00014345274,0.000082071405,0.00027319632,0.00012671093,0.00022666463,0.0008115994],"category_scores_gemma":[0.00009857934,0.00008053995,0.000108957254,0.000072351424,0.00022975588,0.00018808505,0.00018931301,0.00042495265,0.00024125048],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048395694,0.000007202686,0.00017197439,0.000020005535,0.0000015987212,0.0000981521,0.0000049362707,0.00005723797,0.99756,0.0003248555,0.000052990712,0.0016526618],"study_design_scores_gemma":[0.0000070782144,0.00010074568,0.0032124233,0.0000047036683,0.000004480082,0.00075066125,0.000015510526,0.0005920006,0.9922504,0.000139901,0.002919576,0.0000024061176],"about_ca_topic_score_codex":0.00020591394,"about_ca_topic_score_gemma":0.00028950733,"teacher_disagreement_score":0.0008115994,"about_ca_system_score_codex":0.00026634123,"about_ca_system_score_gemma":0.00011889324,"threshold_uncertainty_score":0.0027151108},"labels":[],"label_agreement":null},{"id":"W3115893239","doi":"10.1016/j.ijbiomac.2020.12.127","title":"The emerging roles of NOD-like receptors in antiviral innate immune signaling pathways","year":2020,"lang":"en","type":"review","venue":"International Journal of Biological Macromolecules","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":80,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Natural Science Foundation of China","keywords":"Innate immune system; Pattern recognition receptor; Biology; Signal transduction; Immune system; Receptor; Nod; Interferon; Immunology; Immunity; Cell biology; Gene; Genetics","score_opus":0.033259859271891346,"score_gpt":0.30411899782374924,"score_spread":0.2708591385518579,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3115893239","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00011298105,0.99842465,0.00020643786,0.0002913996,0.0003410909,0.0000019952336,0.00001076605,0.0000055522664,0.0006050858],"genre_scores_gemma":[0.00070892414,0.99794835,0.00023511676,0.00019351154,0.0003826798,0.0000038027447,0.000023932764,9.034809e-7,0.000502853],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999858,0.0000202192,0.000019169169,0.000028174434,0.000052283063,0.000021993683],"domain_scores_gemma":[0.99973446,0.000106514875,0.000039237544,0.0000087687,0.00006837709,0.000042616535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00070100167,0.0009460304,0.0010783164,0.0011104256,0.00017877959,0.0011148507,0.0007998682,0.0010136879,0.0023027633],"category_scores_gemma":[0.00055702624,0.00023342321,0.00031549556,0.0013520302,0.0006019263,0.0015157358,0.0008914427,0.0019227819,0.0014685378],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017542606,0.00005550723,0.00016587367,0.01035198,0.000058129157,0.00029305273,0.000045436518,0.0004908756,0.007979702,0.0056215283,0.02600502,0.94875747],"study_design_scores_gemma":[0.000023189277,0.0000819094,0.0007040547,0.0013853787,0.00005943366,0.00084034156,0.000055674886,0.00015453511,0.0011401586,0.002894569,0.99264306,0.000017773358],"about_ca_topic_score_codex":0.00038010208,"about_ca_topic_score_gemma":0.0006842125,"teacher_disagreement_score":0.0023027633,"about_ca_system_score_codex":0.0005581878,"about_ca_system_score_gemma":0.00078447716,"threshold_uncertainty_score":0.0077035427},"labels":[],"label_agreement":null},{"id":"W3116211797","doi":"10.1101/2020.12.18.20248226","title":"Failure to replicate the association of rare loss-of-function variants in type I IFN immunity genes with severe COVID-19","year":2020,"lang":"en","type":"preprint","venue":"medRxiv","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Genomics; McGill Genome Centre; Columbia College; McGill University; Jewish General Hospital","funders":"National Center for Advancing Translational Sciences; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; King Abdulaziz City for Science and Technology; Jewish General Hospital; Public Health Agency; National Institutes of Health; Qatar Foundation; Public Health Agency of Canada; Cancer Research UK; Génome Québec; Georgia Clinical and Translational Science Alliance","keywords":"Biology; Candidate gene; Gene; Genetics; Population; Loss function; Coronavirus disease 2019 (COVID-19); Exome sequencing; Mutation; Disease; Medicine; Internal medicine; Phenotype","score_opus":0.028698864979790385,"score_gpt":0.27534392732375157,"score_spread":0.2466450623439612,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3116211797","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":"reproducibility","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":"reproducibility","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9887102,0.00065942924,0.0050541926,0.00035919165,0.00009716638,0.000049393773,0.002346259,0.0000675411,0.0026566447],"genre_scores_gemma":[0.9960305,0.00015828013,0.0012606462,0.00024255771,0.000030860112,0.000032531174,0.001796627,0.000053811702,0.00039423734],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978503,0.0004126089,0.00025101122,0.000828117,0.00040528562,0.00025272215],"domain_scores_gemma":[0.99418324,0.0025658002,0.0010890865,0.0012073815,0.0005430025,0.00041145715],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0029491954,0.0006184826,0.0005046584,0.0009560816,0.0009484116,0.0011394183,0.0005994904,0.00089938985,0.0036603177],"category_scores_gemma":[0.011142081,0.00021079338,0.0009846138,0.00076465117,0.0009689407,0.00045899625,0.00089246506,0.0009548108,0.0006611412],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009800172,0.00006479079,0.9327456,0.0002732491,0.00085540855,0.0028774494,0.00063955365,0.00038473547,0.045487005,0.00069071265,0.0013228764,0.013678714],"study_design_scores_gemma":[0.00011793233,0.00050984655,0.9537502,0.00013835171,0.0006416761,0.013790621,0.00057736697,0.0011972104,0.018787306,0.0019656233,0.008488768,0.000035045836],"about_ca_topic_score_codex":0.0019723093,"about_ca_topic_score_gemma":0.0020518398,"teacher_disagreement_score":0.9970508,"about_ca_system_score_codex":0.00026093892,"about_ca_system_score_gemma":0.000328474,"threshold_uncertainty_score":0.015596986},"labels":[],"label_agreement":null},{"id":"W3116244508","doi":"10.1101/2020.12.23.424177","title":"Identification of COVID-19-relevant transcriptional regulatory networks and associated kinases as potential therapeutic targets","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Biology; Systems biology; Computational biology; Interferon regulatory factors; Signal transduction; Gene regulatory network; Transcriptional regulation; Identification (biology); microRNA; Kinase; Regulation of gene expression; Gene; Transcription factor; Cell biology; Gene expression; Genetics","score_opus":0.014861483635734701,"score_gpt":0.23382461939811328,"score_spread":0.21896313576237858,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3116244508","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91307616,0.008393573,0.06462934,0.0007995172,0.00010121144,0.00025414987,0.0052515636,0.00092108245,0.0065733576],"genre_scores_gemma":[0.96974105,0.002323272,0.023529336,0.00010472287,0.00002055144,0.000117880605,0.003258983,0.000036580765,0.000867648],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99991906,0.000018608423,0.0000047038607,0.000023831379,0.00001962804,0.000014204564],"domain_scores_gemma":[0.9999311,0.000022724334,0.000024248042,0.000004652202,0.0000079164765,0.000009410315],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023201646,0.00047286908,0.00061518804,0.00039436205,0.00015536945,0.0006476877,0.00027071653,0.00022081344,0.0022280568],"category_scores_gemma":[0.0002761979,0.00014715634,0.00055948447,0.00029342627,0.00015181689,0.0002952351,0.000276955,0.00044120854,0.00027230982],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003091466,0.0007079919,0.030213663,0.0016065723,0.00040188714,0.0007265826,0.00006772539,0.25118878,0.6111121,0.010282219,0.0027599484,0.08784097],"study_design_scores_gemma":[0.00036748152,0.000849552,0.02059169,0.000110620225,0.000410036,0.0006147843,0.00017037422,0.7331333,0.21972005,0.0098203,0.014159761,0.000052120067],"about_ca_topic_score_codex":0.0005475487,"about_ca_topic_score_gemma":0.0009810895,"teacher_disagreement_score":0.0022280568,"about_ca_system_score_codex":0.0006284078,"about_ca_system_score_gemma":0.0005543829,"threshold_uncertainty_score":0.007453561},"labels":[],"label_agreement":null},{"id":"W3118621241","doi":"10.1684/vir.2020.0869","title":"Cellular and antiviral functions of TRIM5α","year":2020,"lang":"en","type":"review","venue":"Virologie","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Trois-Rivières","funders":"","keywords":"Retrovirus; Autophagy; ULK1; Biology; Capsid; Downregulation and upregulation; Function (biology); Cell biology; Interferon; Computational biology; Virology; Virus; Genetics; Kinase; Gene","score_opus":0.053086070922047895,"score_gpt":0.2980966174174764,"score_spread":0.2450105464954285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3118621241","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003375293,0.9977335,0.00016645619,0.00015045852,0.00020475729,0.0000050614353,0.00003445178,0.000010065118,0.0013576751],"genre_scores_gemma":[0.0019731896,0.995688,0.00032399152,0.00021559223,0.00027696983,0.000010287174,0.00011172038,0.0000021595808,0.0013980125],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999285,0.000010317211,0.000010527593,0.000014664174,0.000025511608,0.000010581182],"domain_scores_gemma":[0.9999387,0.000020708627,0.000010409,0.0000024582198,0.00001741807,0.0000103610755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024545932,0.0006507597,0.000664371,0.0013061066,0.00020359288,0.00048435712,0.0005299756,0.00057232426,0.0024876026],"category_scores_gemma":[0.00023188817,0.00015099859,0.00029409057,0.0007255497,0.00021011799,0.0006599863,0.00040650216,0.0009571708,0.0016621351],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000106439424,0.000038554957,0.00019063412,0.01334746,0.000067969835,0.0002999267,0.00006484429,0.00038026727,0.012849654,0.0037757908,0.025115876,0.9437624],"study_design_scores_gemma":[0.000008705021,0.000087970024,0.0008113153,0.0011324228,0.000071059396,0.0018260863,0.00003470856,0.0000850185,0.0026330673,0.0009743563,0.992322,0.000013386715],"about_ca_topic_score_codex":0.0005821022,"about_ca_topic_score_gemma":0.00076370226,"teacher_disagreement_score":0.0024876026,"about_ca_system_score_codex":0.00046537473,"about_ca_system_score_gemma":0.000526051,"threshold_uncertainty_score":0.008321822},"labels":[],"label_agreement":null},{"id":"W3119539575","doi":"10.1371/journal.ppat.1009111","title":"TRK-Fused Gene (TFG), a protein involved in protein secretion pathways, is an essential component of the antiviral innate immune response","year":2021,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute; Université de Montréal","funders":"Hydro-Québec; Fonds de Recherche du Québec - Santé; Institute of Infection and Immunity; Canadian Institutes of Health Research; Institute of Cancer Research; Canada Research Chairs","keywords":"Biology; Cell biology; TRIF; Innate immune system; Signal transducing adaptor protein; TLR3; Ubiquitin ligase; Endoplasmic reticulum; Signal transduction; Sendai virus; Receptor; Toll-like receptor; Ubiquitin; Biochemistry; Virology; Virus; Gene","score_opus":0.02181729443174184,"score_gpt":0.22945225378354023,"score_spread":0.20763495935179838,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3119539575","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9784681,0.006542433,0.008943921,0.00040233196,0.000114309645,0.000073984746,0.0028174208,0.0006301963,0.002007283],"genre_scores_gemma":[0.9879395,0.0013502557,0.00565899,0.00012271896,0.00001707246,0.00004047023,0.0024654358,0.00004950909,0.0023560445],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984705,0.00001682394,0.00001336468,0.000043363638,0.000047202222,0.00003220493],"domain_scores_gemma":[0.99991846,0.0000069575945,0.000034752462,0.00000841938,0.000008169221,0.000023173345],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000910154,0.00050096936,0.0002502693,0.0002850607,0.00019806613,0.00033630533,0.00021768987,0.0004624376,0.000971565],"category_scores_gemma":[0.000104744046,0.00009124472,0.00045656634,0.0003118918,0.00034388044,0.00017531042,0.00029381286,0.0004311473,0.0008246495],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005963698,0.000008649126,0.00029961645,0.000035863,0.000006107222,0.00009175658,0.0000069561797,0.000055167708,0.99748284,0.000110759494,0.00009544852,0.0017472182],"study_design_scores_gemma":[0.000019546325,0.00019525616,0.007108297,0.000009970992,0.000026791799,0.0017976584,0.00003010066,0.0010117762,0.9800867,0.00008270553,0.009619529,0.000011698969],"about_ca_topic_score_codex":0.00065658864,"about_ca_topic_score_gemma":0.0006020941,"teacher_disagreement_score":0.000971565,"about_ca_system_score_codex":0.00071386644,"about_ca_system_score_gemma":0.0003021121,"threshold_uncertainty_score":0.0051795244},"labels":[],"label_agreement":null},{"id":"W3119854278","doi":"10.1016/j.ijbiomac.2020.12.207","title":"The emerging roles of the MARCH ligases in antiviral innate immunity","year":2021,"lang":"en","type":"review","venue":"International Journal of Biological Macromolecules","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Natural Science Foundation of China","keywords":"Innate immune system; Ubiquitin; Biology; Endosome; Cell biology; Immune system; Endoplasmic reticulum; Viral replication; Intrinsic immunity; Virus; Virology; Genetics; Gene","score_opus":0.036893008866730866,"score_gpt":0.34192255109386316,"score_spread":0.3050295422271323,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3119854278","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00014470788,0.99781203,0.00025500703,0.000473302,0.00041092202,0.000002408588,0.000015611617,0.000007798163,0.0008781226],"genre_scores_gemma":[0.0010083548,0.99716634,0.00028208763,0.00026986594,0.00044322296,0.000004339637,0.000034306366,0.0000014838189,0.0007898931],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998319,0.000027146369,0.000019998082,0.000029304787,0.00006197767,0.00002963699],"domain_scores_gemma":[0.9997172,0.00010332058,0.000043854034,0.000011346371,0.000076142554,0.00004812094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00088834175,0.00087838055,0.0011335566,0.001159792,0.00023681628,0.0013440844,0.00081438874,0.0011616832,0.002272444],"category_scores_gemma":[0.00067615986,0.00026682083,0.0003724509,0.001651048,0.0007506833,0.0017338878,0.0009399439,0.0022759475,0.001542089],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017064654,0.000043716118,0.00020344208,0.0067918617,0.000072532726,0.00022670576,0.000042041585,0.00047284743,0.0063811033,0.008564836,0.03647831,0.94055206],"study_design_scores_gemma":[0.000017031414,0.00005495386,0.00045172116,0.00066483935,0.000043486052,0.00051215914,0.000037766822,0.0001127681,0.0009636323,0.0032032393,0.99392515,0.000013239636],"about_ca_topic_score_codex":0.0004748518,"about_ca_topic_score_gemma":0.0009774612,"teacher_disagreement_score":0.002272444,"about_ca_system_score_codex":0.00075654854,"about_ca_system_score_gemma":0.000981076,"threshold_uncertainty_score":0.007602155},"labels":[],"label_agreement":null},{"id":"W3120166422","doi":"10.1016/j.celrep.2020.108586","title":"A Nuclear Export Signal Is Required for cGAS to Sense Cytosolic DNA","year":2021,"lang":"en","type":"article","venue":"Cell Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":98,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research; Ministry of Science and Technology of the People's Republic of China; National Natural Science Foundation of China","keywords":"Nuclear export signal; Cytoplasm; Cytosol; Biology; Cell biology; Nuclear localization sequence; Nuclear transport; DNA; Subcellular localization; Nucleus; Cell nucleus; Biochemistry; Enzyme","score_opus":0.017385967048683133,"score_gpt":0.24886483897996228,"score_spread":0.23147887193127914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3120166422","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9799653,0.00055390445,0.014341269,0.0002890558,0.0001269016,0.00003104328,0.0008252744,0.0003131567,0.003554176],"genre_scores_gemma":[0.98928565,0.00013552628,0.005670577,0.00006430101,0.000015364985,0.000018799577,0.0013096633,0.00007715768,0.0034230012],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988556,0.000020172896,0.000015028097,0.000023591432,0.000035549307,0.000020117526],"domain_scores_gemma":[0.9996345,0.00006699966,0.00009776463,0.000062101266,0.000049093174,0.00008962629],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013588116,0.00035934607,0.0003268132,0.0001106956,0.0002279996,0.00034856357,0.00023759133,0.00036084867,0.0027777888],"category_scores_gemma":[0.00034416132,0.0001108403,0.00033117284,0.00009795115,0.00042651393,0.0003211437,0.0002685868,0.00061822974,0.0011472245],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011336372,0.000008789009,0.00027349085,0.000029819646,0.000004432392,0.00022382637,0.000013372672,0.000046920763,0.9977151,0.00030717129,0.000050188304,0.0012135961],"study_design_scores_gemma":[0.000018278834,0.00008584698,0.0028592458,0.000008764345,0.000008028874,0.00079987396,0.000036986323,0.0006056323,0.9896215,0.00012011682,0.0058280905,0.000007711395],"about_ca_topic_score_codex":0.0006754295,"about_ca_topic_score_gemma":0.0013148235,"teacher_disagreement_score":0.0027777888,"about_ca_system_score_codex":0.0004283863,"about_ca_system_score_gemma":0.0004901203,"threshold_uncertainty_score":0.009292603},"labels":[],"label_agreement":null},{"id":"W3122850411","doi":"10.1016/j.ajhg.2021.01.008","title":"De novo TRIM8 variants impair its protein localization to nuclear bodies and cause developmental delay, epilepsy, and focal segmental glomerulosclerosis","year":2021,"lang":"en","type":"article","venue":"The American Journal of Human Genetics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; University of Calgary","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Center for Advancing Translational Sciences; Medical Research Council; Canadian Institutes of Health Research; Manchester Biomedical Research Centre; Manton Center for Orphan Disease Research, Boston Children's Hospital; National Human Genome Research Institute; Alberta Children's Hospital Research Institute; Broad Institute; Alberta Children's Hospital Foundation; Deutsche Forschungsgemeinschaft; National Institute for Health and Care Research; Higher Education Commision, Pakistan; U.S. Department of Defense; Kidney Foundation of Canada; National Institutes of Health; Kidney Research UK; AstraZeneca; Canadian Society of Nephrology; National Eye Institute; Guy's and St Thomas' NHS Foundation Trust; National Institute of Diabetes and Digestive and Kidney Diseases; ASN Foundation for Kidney Research; King’s College London; National Heart, Lung, and Blood Institute; American Society of Pediatric Nephrology","keywords":"Epilepsy; Focal segmental glomerulosclerosis; Neuroscience; Biology; Medicine; Genetics; Glomerulonephritis","score_opus":0.017143257644322948,"score_gpt":0.2578445059418636,"score_spread":0.24070124829754064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3122850411","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9910698,0.00063683896,0.0045343135,0.00035615783,0.0001819254,0.000034697932,0.0009321027,0.00037868487,0.0018754217],"genre_scores_gemma":[0.995946,0.00016198852,0.0014242183,0.00009872015,0.000027861022,0.000017480319,0.00034649242,0.00010504007,0.0018722095],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99974555,0.000059286755,0.000041986914,0.00005206702,0.000059670536,0.00004142792],"domain_scores_gemma":[0.9994665,0.00013034814,0.00018432134,0.000060933802,0.000029183262,0.00012878704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019702922,0.00075995695,0.00032552707,0.00038476367,0.00028118188,0.00034960086,0.00060803624,0.0009854176,0.004021821],"category_scores_gemma":[0.000371661,0.0002349001,0.000391868,0.00019527304,0.0006367089,0.00016927528,0.0003732485,0.0010644809,0.0010499591],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061655475,0.00013639063,0.0012422146,0.00008107339,0.000093989926,0.0062980773,0.000059557216,0.00063831435,0.98457795,0.0010027691,0.0006146614,0.0046384735],"study_design_scores_gemma":[0.00037849054,0.0007968461,0.024550041,0.000052679487,0.00027437942,0.032027494,0.00026894084,0.0068194834,0.9211938,0.0012699524,0.012305415,0.000062387575],"about_ca_topic_score_codex":0.0010556555,"about_ca_topic_score_gemma":0.0018241482,"teacher_disagreement_score":0.004021821,"about_ca_system_score_codex":0.00038821524,"about_ca_system_score_gemma":0.00029640438,"threshold_uncertainty_score":0.013454318},"labels":[],"label_agreement":null},{"id":"W3124288694","doi":"10.1002/cbic.202000787","title":"Targeting TRIM Proteins: A Quest towards Drugging an Emerging Protein Class","year":2021,"lang":"en","type":"review","venue":"ChemBioChem","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"European Commission; European Federation of Pharmaceutical Industries and Associations; McGill University","keywords":"Trim; Chemistry; Computational biology; Protein–protein interaction; Biochemistry; Nanotechnology; Biology; Computer science; Materials science","score_opus":0.04436664315624375,"score_gpt":0.33653491465555724,"score_spread":0.29216827149931346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3124288694","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00065105857,0.9956601,0.0008996552,0.00047487524,0.00026477902,0.00000785128,0.000025657477,0.00002975241,0.001986199],"genre_scores_gemma":[0.0026934675,0.993693,0.0006953033,0.0004189504,0.00024943653,0.000014004863,0.000054012024,0.0000051134507,0.0021767737],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99991405,0.000012163775,0.0000065282147,0.000018393886,0.00003442768,0.0000143388415],"domain_scores_gemma":[0.99994266,0.000017568953,0.000009676558,0.0000030141844,0.000015942693,0.000011101501],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029022753,0.0005327752,0.0007698129,0.0010808985,0.00020228831,0.0006510005,0.00052120094,0.00083099236,0.002468381],"category_scores_gemma":[0.00019100012,0.00020623638,0.00027130148,0.00075345475,0.00034166372,0.001069049,0.0005118728,0.0016062083,0.0019039777],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009511914,0.000092376664,0.00012441693,0.008561565,0.000057888163,0.0002958981,0.000059756327,0.0006264796,0.023235578,0.013212802,0.03128941,0.9223487],"study_design_scores_gemma":[0.000013059821,0.00010370462,0.00024910562,0.000669086,0.00003285484,0.0010094289,0.000027389247,0.00021045929,0.0040932293,0.0023360525,0.99124444,0.000011263543],"about_ca_topic_score_codex":0.00028247054,"about_ca_topic_score_gemma":0.00052889966,"teacher_disagreement_score":0.002468381,"about_ca_system_score_codex":0.0004129402,"about_ca_system_score_gemma":0.00040403774,"threshold_uncertainty_score":0.008257568},"labels":[],"label_agreement":null},{"id":"W3124786096","doi":"10.1101/2021.01.25.428122","title":"Profiling transcription factor sub-networks in type I interferon signaling and in response to SARS-CoV-2 infection","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Queen's University","keywords":"Biology; Interferon; Transcription factor; Interferon regulatory factors; IRF1; Innate immune system; Cell biology; Signal transduction; Immune system; STAT1; Sp3 transcription factor; Immunology; Cancer research; Gene; Genetics; Enhancer","score_opus":0.02204622763735841,"score_gpt":0.24908113948738983,"score_spread":0.2270349118500314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3124786096","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922915,0.0012367928,0.0028394347,0.000058745918,0.0000119859205,0.00003418837,0.0028962092,0.000062755396,0.00056837447],"genre_scores_gemma":[0.9894288,0.00066077535,0.003105144,0.00007610923,0.000017007207,0.000084768275,0.0055279555,0.00001829341,0.001081182],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997861,0.000023298393,0.000010210729,0.00009117559,0.000042650696,0.000046498793],"domain_scores_gemma":[0.9998473,0.000038237566,0.000045070163,0.000012595518,0.000029969337,0.000026902102],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017215394,0.00022421619,0.00041689887,0.0005454471,0.0001807785,0.00037669713,0.00010935863,0.00025548096,0.0007605097],"category_scores_gemma":[0.000197497,0.00015423125,0.00038956414,0.00061005517,0.00016362782,0.00023344836,0.00020074063,0.0003710443,0.0003387591],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031592103,0.000019153164,0.0067056203,0.00006166623,0.000017082519,0.00003315751,0.000039984076,0.00032412764,0.9903086,0.000060791466,0.000070728805,0.0020431199],"study_design_scores_gemma":[0.000027998081,0.0005120988,0.4968602,0.000034264795,0.00013137556,0.0004691431,0.00045127442,0.019350274,0.47766438,0.0007531803,0.0037125337,0.000033289158],"about_ca_topic_score_codex":0.0006298246,"about_ca_topic_score_gemma":0.0008761195,"teacher_disagreement_score":0.0007605097,"about_ca_system_score_codex":0.00030865334,"about_ca_system_score_gemma":0.00020597737,"threshold_uncertainty_score":0.002544105},"labels":[],"label_agreement":null},{"id":"W3125989326","doi":"10.1101/2021.01.26.428337","title":"STING agonism enhances anti-tumor immune responses and therapeutic efficacy of PARP inhibition in <i>BRCA</i> -associated breast cancer","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Daiichi Sankyo Europe; Dana-Farber/Harvard Cancer Center; Ludwig Center at Harvard; National Institutes of Health; Sierra Oncology; Ipsen; Astex Pharmaceuticals; G1 Therapeutics; Pfizer; Merck KGaA; Array BioPharma; Eli Lilly and Company","keywords":"Cancer research; Immune system; Breast cancer; Stimulator of interferon genes; Cancer; PARP inhibitor; Proinflammatory cytokine; Poly ADP ribose polymerase; Medicine; Sting; Immunology; Dendritic cell; Immunotherapy; T cell; Pharmacology; Biology; Internal medicine; Innate immune system; Inflammation; Polymerase","score_opus":0.012316094097589634,"score_gpt":0.23767927405824646,"score_spread":0.22536317996065683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3125989326","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993455,0.0016295571,0.0016596098,0.000108503045,0.000056302557,0.000027772288,0.0002954635,0.000109309214,0.0026586],"genre_scores_gemma":[0.9956137,0.0007079175,0.001414288,0.000043025437,0.000019592175,0.000017547194,0.00026404476,0.000012946637,0.0019069276],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99994814,0.000010280434,0.000003795517,0.000007796709,0.000015720703,0.00001424357],"domain_scores_gemma":[0.999977,0.0000036398733,0.0000066968396,0.000002743161,0.0000021709982,0.000007802066],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000929159,0.00016204875,0.00017650583,0.000119964294,0.00005466325,0.00016758146,0.0000748952,0.000110038985,0.0015675147],"category_scores_gemma":[0.00005500324,0.000054447708,0.000118082244,0.00007675031,0.00008387838,0.00009055405,0.00008589034,0.000376286,0.00032622795],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034446112,0.00007216326,0.00017119503,0.00003008935,0.0000058873816,0.000032537013,0.0000070950455,0.00017051885,0.994753,0.00006152082,0.00014605265,0.0042054583],"study_design_scores_gemma":[0.000026649326,0.00090127374,0.0021837864,0.000003854788,0.000013308896,0.00015957636,0.000008070314,0.00091314345,0.9933443,0.000025591089,0.0024184901,0.0000019146166],"about_ca_topic_score_codex":0.00012641826,"about_ca_topic_score_gemma":0.00020317789,"teacher_disagreement_score":0.0015675147,"about_ca_system_score_codex":0.00012652633,"about_ca_system_score_gemma":0.00009653612,"threshold_uncertainty_score":0.005243838},"labels":[],"label_agreement":null},{"id":"W3126646762","doi":"10.1038/s41598-021-82522-8","title":"Detection of selection signatures for response to Aleutian mink disease virus infection in American mink","year":2021,"lang":"en","type":"article","venue":"Scientific Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Agriculture and Agri-Food Canada; Agri-Futures Nova Scotia Association; Natural Sciences and Engineering Research Council of Canada; Mitacs; Compute Canada; Department of Agriculture, Nova Scotia","keywords":"Biology; Mink; American mink; Genetics; Genotyping; Gene; Virology; Genotype","score_opus":0.008976898231705768,"score_gpt":0.2662400904848603,"score_spread":0.2572631922531545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3126646762","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99956745,0.000045722816,0.00014740617,0.00000297707,8.701974e-7,0.0000025489205,0.00012628606,0.0000021889073,0.00010458176],"genre_scores_gemma":[0.99908733,0.000027061478,0.0003148065,0.000011814631,0.000001493104,0.000007769075,0.00030454094,0.0000024395708,0.00024267321],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99988055,0.000013576712,0.0000068445966,0.000052569983,0.000019509414,0.00002690138],"domain_scores_gemma":[0.99986887,0.00001915799,0.000057876405,0.000008450101,0.00001871341,0.000026889216],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000103769875,0.00017844306,0.00020787082,0.00045618974,0.00024902754,0.00024561503,0.00008915546,0.0001664987,0.00058091554],"category_scores_gemma":[0.00012675734,0.000082952494,0.00018904512,0.00027553985,0.00018644251,0.00008910836,0.00018506421,0.00017925206,0.00009891748],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003077176,0.000025643734,0.17885873,0.000036488895,0.000036717396,0.00009080704,0.0002245437,0.00009589434,0.8177497,0.000030592466,0.000025261263,0.0025178648],"study_design_scores_gemma":[0.0000019661227,0.00014051086,0.9866519,0.0000026976115,0.000017976918,0.00015762108,0.000205559,0.00027282626,0.012283097,0.000017771956,0.00024421938,0.0000038180096],"about_ca_topic_score_codex":0.0015840454,"about_ca_topic_score_gemma":0.0024766417,"teacher_disagreement_score":0.0015840454,"about_ca_system_score_codex":0.00014949674,"about_ca_system_score_gemma":0.00008647861,"threshold_uncertainty_score":0.0031496882},"labels":[],"label_agreement":null},{"id":"W3126829055","doi":"10.3390/pathogens10020149","title":"Differential Expression of Serum Exosome microRNAs and Cytokines in Influenza A and B Patients Collected in the 2016 and 2017 Influenza Seasons","year":2021,"lang":"en","type":"article","venue":"Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute for Occupational Safety and Health; Centers for Disease Control and Prevention","keywords":"microRNA; Exosome; Microvesicles; Biology; Influenza A virus; Immunology; Virology; Virus; Interferon; Viral replication; Tumor necrosis factor alpha; Real-time polymerase chain reaction; Gene; Genetics","score_opus":0.018560256636905165,"score_gpt":0.25949950886853507,"score_spread":0.2409392522316299,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3126829055","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992981,0.00023034791,0.000059958533,0.000010307128,0.0000066584953,0.0000054204165,0.00021630066,0.0000015051666,0.00017138374],"genre_scores_gemma":[0.99907506,0.00012074865,0.00013554633,0.00003073224,0.000008535127,0.000015006881,0.000453455,0.0000017876323,0.00015915066],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999706,0.000047278096,0.000060946775,0.00008292153,0.000049476235,0.00005340517],"domain_scores_gemma":[0.9996668,0.00005845335,0.00012091699,0.000013949264,0.00007186588,0.00006793782],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021306747,0.00020670943,0.00038560346,0.00054153573,0.00024561593,0.00041545453,0.00009748329,0.00032242143,0.0006206441],"category_scores_gemma":[0.0007335844,0.00016346844,0.00024796918,0.00048126996,0.00017591624,0.00023031229,0.00024940557,0.00026037628,0.00015280287],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001629603,0.00004591888,0.96870005,0.000045460452,0.00008009724,0.0004050459,0.0004133811,0.000060170947,0.024682684,0.000032250773,0.00013465094,0.0037706825],"study_design_scores_gemma":[0.000012721801,0.00031675614,0.9953081,0.000009076562,0.000034764198,0.00084969396,0.00059626397,0.00023931477,0.0022241152,0.00002018661,0.0003826782,0.0000064718224],"about_ca_topic_score_codex":0.001103252,"about_ca_topic_score_gemma":0.0010224398,"teacher_disagreement_score":0.001103252,"about_ca_system_score_codex":0.00017421826,"about_ca_system_score_gemma":0.00015362023,"threshold_uncertainty_score":0.0021936297},"labels":[],"label_agreement":null},{"id":"W3128990859","doi":"10.1016/j.cytogfr.2021.01.002","title":"When Rab GTPases meet innate immune signaling pathways","year":2021,"lang":"en","type":"review","venue":"Cytokine & Growth Factor Reviews","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Natural Science Foundation of China","keywords":"Rab; GTPase; Innate immune system; Cell biology; Biology; Signal transduction; Pattern recognition receptor; Immune system; Immunology","score_opus":0.08116758729873243,"score_gpt":0.3147939277332729,"score_spread":0.2336263404345405,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3128990859","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009002517,0.99626946,0.00020610564,0.0009601091,0.0012259863,0.0000035595897,0.000011193853,0.000011654739,0.0012218968],"genre_scores_gemma":[0.00084920315,0.9951592,0.0002421584,0.0008824814,0.00136508,0.0000092464325,0.000030455276,0.0000034502139,0.0014587434],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99970144,0.000057836478,0.000033182077,0.000042934287,0.00011416456,0.000050412975],"domain_scores_gemma":[0.99973685,0.000116672796,0.000027646647,0.0000106444695,0.000070756854,0.000037437672],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000994297,0.0011631991,0.0016128563,0.0014544603,0.00032762834,0.0021986521,0.00089840917,0.0019128954,0.0029231885],"category_scores_gemma":[0.000974605,0.00044438758,0.0003523543,0.0012117664,0.0009531176,0.0029968966,0.0012116855,0.003271553,0.0032406528],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022168485,0.000037664384,0.00015044704,0.00787139,0.00007057614,0.00036001953,0.0001010519,0.0004684095,0.007186091,0.020216648,0.09977566,0.8635404],"study_design_scores_gemma":[0.00002028636,0.000029056482,0.0002140615,0.0011570245,0.000039546336,0.0004083867,0.000048276706,0.00009312992,0.0005358258,0.00498046,0.99246323,0.000010720175],"about_ca_topic_score_codex":0.0007475851,"about_ca_topic_score_gemma":0.0019353246,"teacher_disagreement_score":0.0029231885,"about_ca_system_score_codex":0.0012905501,"about_ca_system_score_gemma":0.0011519777,"threshold_uncertainty_score":0.009779036},"labels":[],"label_agreement":null},{"id":"W3131890270","doi":"10.1016/j.molcel.2021.01.030","title":"microRNA-induced translational control of antiviral immunity by the cap-binding protein 4EHP","year":2021,"lang":"en","type":"article","venue":"Molecular Cell","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Jewish General Hospital; Christie (Canada); Children's Hospital of Eastern Ontario; McGill University; Occupational Cancer Research Centre","funders":"Medical Research Council; Canadian Institutes of Health Research; Terry Fox Research Institute","keywords":"Biology; Gene silencing; microRNA; Cell biology; Messenger RNA; Translation (biology); Viral replication; Downregulation and upregulation; Interferon; RNA interference; Virus; RNA; Virology; Genetics; Gene","score_opus":0.007688551285005734,"score_gpt":0.21632119290425525,"score_spread":0.20863264161924952,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3131890270","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96269894,0.00824489,0.015820868,0.0013554875,0.0005842408,0.00007793704,0.00079886534,0.0004679711,0.009950886],"genre_scores_gemma":[0.98947805,0.00052375527,0.004946618,0.0004422021,0.00008698001,0.000045178636,0.0007894397,0.00011013313,0.0035776994],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996877,0.00007218664,0.0000139962485,0.000078593686,0.00005635638,0.00009123168],"domain_scores_gemma":[0.99979645,0.00005360856,0.000039110524,0.00003007268,0.000029505061,0.00005118619],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003905186,0.0004377419,0.00034179373,0.00030095532,0.0004729622,0.00060927914,0.00030594744,0.00045293305,0.0034275674],"category_scores_gemma":[0.00041062105,0.00025267215,0.00044042864,0.00012567356,0.0004777999,0.00028085773,0.0006467575,0.001027402,0.0010658106],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031691435,0.000025535246,0.00022105078,0.000040708113,0.000008817753,0.00013122542,0.00002091503,0.0001423606,0.9944613,0.00092367776,0.0004221712,0.0032854637],"study_design_scores_gemma":[0.00006522527,0.00018165847,0.008608809,0.000015492566,0.000015761516,0.00020957514,0.000055780234,0.0036957795,0.97984993,0.0008842683,0.0064020306,0.000015771724],"about_ca_topic_score_codex":0.00043990038,"about_ca_topic_score_gemma":0.0007503086,"teacher_disagreement_score":0.0034275674,"about_ca_system_score_codex":0.0006397558,"about_ca_system_score_gemma":0.00040831667,"threshold_uncertainty_score":0.011466324},"labels":[],"label_agreement":null},{"id":"W3133721962","doi":"10.7554/elife.64806","title":"Anti-ferroptotic mechanism of IL4i1-mediated amino acid metabolism","year":2021,"lang":"en","type":"article","venue":"eLife","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":125,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"European Research Council; Max-Planck-Gesellschaft; Deutsche Forschungsgemeinschaft","keywords":"Biology; Amino acid; Biochemistry; Oxidase test; Metabolism; Programmed cell death; Oxidative phosphorylation; Cell biology; Enzyme; Apoptosis","score_opus":0.011807331637056285,"score_gpt":0.23361470698519862,"score_spread":0.22180737534814235,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3133721962","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9863751,0.0036778592,0.006492494,0.00028773598,0.000043680047,0.00004030247,0.00017662486,0.00008235295,0.0028239882],"genre_scores_gemma":[0.9942636,0.0009502296,0.0023853106,0.00007381878,0.000014682318,0.000036771013,0.00014018005,0.0000071181216,0.0021282316],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993765,0.000011724164,0.0000032414443,0.000012683689,0.000011578528,0.000023177503],"domain_scores_gemma":[0.9999442,0.000007013294,0.00002052976,0.0000043892637,0.000010678139,0.000013095263],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012840012,0.00031874835,0.00017331031,0.00016803124,0.00015779998,0.00017672661,0.00021489715,0.00023401866,0.00075776904],"category_scores_gemma":[0.00007736122,0.00006918408,0.00018368523,0.00006643002,0.0002537881,0.00016003197,0.00015507506,0.00036067292,0.0001611418],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018093426,0.000018279497,0.0003544209,0.0000433342,0.000003821803,0.00007221599,0.000010527409,0.00007583798,0.9971512,0.00032831583,0.000032154385,0.0017290135],"study_design_scores_gemma":[0.000023419007,0.00017726021,0.0023484628,0.0000061657956,0.00000893663,0.00018558365,0.000018487925,0.00050869666,0.995131,0.00015333424,0.0014364906,0.0000022737163],"about_ca_topic_score_codex":0.00017828846,"about_ca_topic_score_gemma":0.00018490425,"teacher_disagreement_score":0.00075776904,"about_ca_system_score_codex":0.00040473064,"about_ca_system_score_gemma":0.0001648663,"threshold_uncertainty_score":0.002936542},"labels":[],"label_agreement":null},{"id":"W3133991527","doi":"10.1136/gutjnl-2020-323426","title":"<i>Lactobacillus rhamnosus</i> GG induces cGAS/STING- dependent type I interferon and improves response to immune checkpoint blockade","year":2021,"lang":"en","type":"article","venue":"Gut","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":298,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; Ludwig Institute for Cancer Research","keywords":"Lactobacillus rhamnosus; Sting; Interferon; Stimulator of interferon genes; Immune checkpoint; Immune system; Immunotherapy; CD8; Cancer research; Immunity; Biology; Cancer immunotherapy; Immunology; T cell; Innate immune system; Medicine; Probiotic","score_opus":0.014319223264041277,"score_gpt":0.25057703559910116,"score_spread":0.23625781233505988,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3133991527","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951894,0.0014745027,0.0013845299,0.00018934894,0.000049568658,0.00005043864,0.00032580938,0.00016024002,0.0011760078],"genre_scores_gemma":[0.99576145,0.0006013467,0.0019781955,0.00013635412,0.000020889755,0.00003929029,0.00042157376,0.000027296064,0.0010135743],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998417,0.000040740502,0.000015527987,0.000023756334,0.000032133583,0.000046126566],"domain_scores_gemma":[0.99993324,0.0000044413223,0.000028828543,0.000006369538,0.0000062397253,0.000020848931],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012561749,0.00038805406,0.0003755682,0.00016353579,0.000072976574,0.00022148162,0.00012817577,0.00020689795,0.000757477],"category_scores_gemma":[0.000090699505,0.00007868031,0.0002724059,0.000121921585,0.00017067787,0.000100677324,0.0001967013,0.00048755357,0.00031230782],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034609862,0.00005220185,0.00010578756,0.0000359863,0.0000058643523,0.000020821532,0.0000037176899,0.000050465802,0.997789,0.000016821059,0.000052233772,0.0015209568],"study_design_scores_gemma":[0.000041156654,0.0019073042,0.0025015501,0.0000094905345,0.00002505909,0.000171361,0.000021240334,0.0004134953,0.9931444,0.000021769638,0.001738574,0.000004538798],"about_ca_topic_score_codex":0.00036176312,"about_ca_topic_score_gemma":0.00054012024,"teacher_disagreement_score":0.000757477,"about_ca_system_score_codex":0.00021971842,"about_ca_system_score_gemma":0.00017724402,"threshold_uncertainty_score":0.0025340319},"labels":[],"label_agreement":null},{"id":"W3134196763","doi":"10.1186/s12929-021-00716-8","title":"When human guanylate-binding proteins meet viral infections","year":2021,"lang":"en","type":"review","venue":"Journal of Biomedical Science","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Science Foundation of Fujian Province; National Natural Science Foundation of China","keywords":"Innate immune system; Biology; Intrinsic immunity; Immunity; Effector; Interferon; Pattern recognition receptor; Immune system; Immunology; Virology","score_opus":0.03913479376986679,"score_gpt":0.3603386994947965,"score_spread":0.32120390572492974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3134196763","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00032882806,0.99611294,0.00017300644,0.0004109763,0.0009907397,0.000007804458,0.000022065115,0.0000117386035,0.0019417886],"genre_scores_gemma":[0.002490141,0.99292386,0.00025517188,0.00063008943,0.00079938915,0.000015025915,0.00006672897,0.0000035307332,0.0028160445],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998466,0.00002778624,0.000022308226,0.00003157518,0.00005270735,0.000019100064],"domain_scores_gemma":[0.9999263,0.000025960571,0.000015076111,0.0000037534994,0.000018385728,0.000010596287],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029621174,0.0007144473,0.000925261,0.00084844814,0.0001892899,0.00068728306,0.00057892955,0.0012633475,0.0024571002],"category_scores_gemma":[0.00035676992,0.0002528093,0.000334877,0.0007611938,0.0005729492,0.0010886851,0.0006022181,0.0015456467,0.002881966],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018154147,0.000037978767,0.000261754,0.014163897,0.0000954258,0.0006336052,0.0001267926,0.00026326507,0.015220947,0.008653037,0.04715593,0.9132059],"study_design_scores_gemma":[0.000014313611,0.000057588266,0.0007185211,0.00071580615,0.00003666385,0.0013296356,0.000034901914,0.0000386119,0.0018572275,0.0014740102,0.9937115,0.000011242577],"about_ca_topic_score_codex":0.0006506636,"about_ca_topic_score_gemma":0.0012154788,"teacher_disagreement_score":0.0024571002,"about_ca_system_score_codex":0.0005896324,"about_ca_system_score_gemma":0.00059971726,"threshold_uncertainty_score":0.008219838},"labels":[],"label_agreement":null},{"id":"W3135367423","doi":"10.1186/s12985-021-01520-4","title":"When MARCH family proteins meet viral infections","year":2021,"lang":"en","type":"review","venue":"Virology Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Biology; Ubiquitin; Viral infection; Virology; Viral protein; Computational biology; Genetics; Virus; Gene","score_opus":0.03780389624768397,"score_gpt":0.3192927394525045,"score_spread":0.28148884320482054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3135367423","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00074260944,0.9948061,0.00029908872,0.00086422695,0.00086763303,0.000009916729,0.00005184813,0.000033471068,0.0023249974],"genre_scores_gemma":[0.004427635,0.990712,0.00036989897,0.000979124,0.00078303466,0.000015917221,0.00017127534,0.0000071984828,0.0025339313],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998311,0.00003297199,0.000024210334,0.000023158773,0.000060091745,0.000028529357],"domain_scores_gemma":[0.9998995,0.000026625927,0.000023149845,0.0000034886702,0.000026162805,0.000021171209],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003408169,0.00052401016,0.00085513806,0.00065633556,0.00020197147,0.0010111333,0.0005564775,0.0010606768,0.0027668772],"category_scores_gemma":[0.0003988251,0.00019490586,0.0003921485,0.0004809235,0.00029078953,0.0011993091,0.00058837095,0.0016068041,0.0028913002],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024134178,0.00003431223,0.000506902,0.0114391185,0.00012787103,0.00076152786,0.00014476564,0.00023493882,0.018081868,0.0057762414,0.075334884,0.8873162],"study_design_scores_gemma":[0.000018967014,0.00006881603,0.0011897575,0.0011511357,0.00007056395,0.0026777652,0.00008061445,0.00006380462,0.0034244074,0.0016957553,0.9895439,0.000014535761],"about_ca_topic_score_codex":0.00034296798,"about_ca_topic_score_gemma":0.00063817244,"teacher_disagreement_score":0.0027668772,"about_ca_system_score_codex":0.0005852325,"about_ca_system_score_gemma":0.00060319604,"threshold_uncertainty_score":0.0092561245},"labels":[],"label_agreement":null},{"id":"W3135549213","doi":"10.1016/j.cyto.2021.155533","title":"Differential levels of IFNα subtypes in autoimmunity and viral infection","year":2021,"lang":"en","type":"article","venue":"Cytokine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Agence Nationale de la Recherche; Medical Research Council; National Institute for Health and Care Research; Wellcome Trust","keywords":"Autoimmunity; Immunology; Interferon; Antibody; Phenotype; Effector; Biology; Autoimmune disease; Receptor; Disease; Medicine; Internal medicine; Genetics; Gene","score_opus":0.016499014120179723,"score_gpt":0.2542912806626472,"score_spread":0.2377922665424675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3135549213","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99554294,0.0021934486,0.0012825963,0.000021678217,0.000012467097,0.000010013544,0.000120149525,0.000015238893,0.00080146943],"genre_scores_gemma":[0.99871695,0.0002736772,0.0005874825,0.000031804586,0.000014088939,0.000013755771,0.00010738338,0.000006316522,0.0002487104],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99913424,0.0003157588,0.00009612061,0.00021739485,0.00012901585,0.00010753679],"domain_scores_gemma":[0.9993376,0.00026332727,0.00017554178,0.00007224393,0.00006400751,0.00008724933],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008421716,0.00032425465,0.00040211878,0.00092139497,0.0002216758,0.0007022199,0.00016219917,0.00041199476,0.0007314386],"category_scores_gemma":[0.0011902364,0.00014636945,0.00016456163,0.0005561888,0.00036606728,0.0003041687,0.00042300377,0.0004172374,0.00024477995],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028923245,0.00008990496,0.3132573,0.00014113571,0.0000850975,0.0003550761,0.00044476995,0.00021036819,0.65355825,0.00021719428,0.0000966557,0.028651975],"study_design_scores_gemma":[0.000032026914,0.0009255359,0.84525645,0.000058163965,0.0001137165,0.004120541,0.0005069311,0.001189326,0.14523865,0.0006024093,0.0019331906,0.000023039673],"about_ca_topic_score_codex":0.00019427095,"about_ca_topic_score_gemma":0.00020910529,"teacher_disagreement_score":0.00092139497,"about_ca_system_score_codex":0.00018998045,"about_ca_system_score_gemma":0.000091910246,"threshold_uncertainty_score":0.0044538975},"labels":[],"label_agreement":null},{"id":"W3137370550","doi":"10.1038/s41419-021-03513-1","title":"Inhibition of HECT E3 ligases as potential therapy for COVID-19","year":2021,"lang":"en","type":"article","venue":"Cell Death and Disease","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institutes of Health; Université de Paris; Assistance publique-Hôpitaux de Paris; Institut National de la Santé et de la Recherche Médicale; Université Claude Bernard Lyon 1; NHLBI Division of Intramural Research; Universität Basel; Fondation pour la Recherche Médicale; St. Giles Foundation; Mercatus Center, George Mason University; Centre National de la Recherche Scientifique; George Mason University; Institut de Médecine et d'Epidémiologie Appliquée; Yale University; National Center for Advancing Translational Sciences; National Human Genome Research Institute; Agence Nationale de la Recherche; Georgia Clinical and Translational Science Alliance; National Institute of Allergy and Infectious Diseases; Howard Hughes Medical Institute","keywords":"NEDD4; Ubiquitin ligase; Ubiquitin; Biology; VP40; Cullin; Genetics; Virology; Gene; RNA","score_opus":0.0158911058375673,"score_gpt":0.2706394430630233,"score_spread":0.254748337225456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3137370550","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.84216344,0.1385497,0.007039122,0.0013188162,0.0002433478,0.00023236158,0.0006300808,0.00030281267,0.009520322],"genre_scores_gemma":[0.9705988,0.022574887,0.002426072,0.0003356854,0.000035842317,0.00006889392,0.00051442906,0.0000125903225,0.00343269],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99995136,0.000012323285,0.000003995066,0.0000060938046,0.000010213234,0.00001593128],"domain_scores_gemma":[0.99997866,0.0000028480947,0.0000069203124,0.000002612213,0.0000031479901,0.0000058197734],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017877738,0.0002330554,0.00029093315,0.00019633891,0.00013041701,0.00022994347,0.00019147988,0.00024599608,0.0010607394],"category_scores_gemma":[0.000056302215,0.000055380184,0.00023916799,0.0001623655,0.00014996047,0.00013753996,0.00015453083,0.0004982316,0.0002399544],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025880975,0.00041596295,0.0015897386,0.00061592675,0.000106603715,0.0005146916,0.00006477124,0.0006294237,0.88235277,0.0013427922,0.0017311784,0.108048104],"study_design_scores_gemma":[0.001077255,0.008046422,0.014029918,0.00011216844,0.00018376921,0.0032864264,0.00016029492,0.001922942,0.8505718,0.0010020464,0.11957236,0.000034670105],"about_ca_topic_score_codex":0.00021510298,"about_ca_topic_score_gemma":0.00076045096,"teacher_disagreement_score":0.0010607394,"about_ca_system_score_codex":0.00025793657,"about_ca_system_score_gemma":0.00015090086,"threshold_uncertainty_score":0.0035485625},"labels":[],"label_agreement":null},{"id":"W3138735531","doi":"10.1038/s43018-021-00185-w","title":"EZH2 inhibition activates a dsRNA–STING–interferon stress axis that potentiates response to PD-1 checkpoint blockade in prostate cancer","year":2021,"lang":"en","type":"article","venue":"Nature Cancer","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":241,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; McGill University; University Health Network; McGill University Health Centre","funders":"National Center for Advancing Translational Sciences; National Cancer Institute; National Institutes of Health","keywords":"Stimulator of interferon genes; Prostate cancer; Cancer research; EZH2; Interferon; Blockade; Immune checkpoint; Cancer; CD8; Chemokine; Medicine; Immunology; Immunotherapy; Biology; Immune system; Innate immune system; Internal medicine; Receptor; Gene expression; Gene","score_opus":0.010121534617188753,"score_gpt":0.2829902234921242,"score_spread":0.2728686888749355,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3138735531","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99374604,0.0015458458,0.00077172264,0.0003326301,0.00015187681,0.00003456011,0.00036193847,0.00016617766,0.0028892625],"genre_scores_gemma":[0.9971464,0.00043416745,0.00028831596,0.00006842829,0.000017978004,0.00002116505,0.00030686043,0.000008713565,0.0017078753],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998254,0.000020619775,0.000008058519,0.000021014233,0.000039241415,0.00008561587],"domain_scores_gemma":[0.99995124,0.000008212483,0.000008519132,0.0000064274273,0.000004619306,0.000020975569],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014299605,0.00024050959,0.00029626823,0.0002109295,0.00020947646,0.00035198143,0.00019507598,0.00023539716,0.0031670807],"category_scores_gemma":[0.00011627371,0.00013917415,0.0002880918,0.00016353719,0.0002262203,0.00020075862,0.0001919178,0.0011288632,0.00034145158],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019982208,0.00051060016,0.0009605823,0.00012040197,0.00006327204,0.000102544356,0.00003169232,0.00061627035,0.982612,0.00041347038,0.00134553,0.011225435],"study_design_scores_gemma":[0.00033758895,0.0031186282,0.021899989,0.000011365302,0.000096343036,0.00034763681,0.00014893495,0.0030477236,0.96114916,0.0002101133,0.009613795,0.000018842113],"about_ca_topic_score_codex":0.0007774967,"about_ca_topic_score_gemma":0.003121305,"teacher_disagreement_score":0.0031670807,"about_ca_system_score_codex":0.0003753588,"about_ca_system_score_gemma":0.0004229989,"threshold_uncertainty_score":0.010594964},"labels":[],"label_agreement":null},{"id":"W3139158277","doi":"10.3389/fimmu.2021.636225","title":"Case Report: Novel SAVI-Causing Variants in STING1 Expand the Clinical Disease Spectrum and Suggest a Refined Model of STING Activation","year":2021,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Sting; Stimulator of interferon genes; Phenotype; Mutation; Disease; Medicine; Biology; Genetics; Gene; Receptor; Internal medicine; Innate immune system","score_opus":0.04149359809437746,"score_gpt":0.29584923245842176,"score_spread":0.2543556343640443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3139158277","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98335636,0.0021123106,0.0053406185,0.0025052396,0.00018631355,0.00016600158,0.00035270947,0.00020053808,0.0057800673],"genre_scores_gemma":[0.99652773,0.0003298232,0.0016817302,0.00035144135,0.00027489488,0.000025401578,0.00007585985,0.000015639342,0.00071756484],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9995316,0.000051124345,0.000036813584,0.00016817902,0.00004257397,0.00016967597],"domain_scores_gemma":[0.9992668,0.00022316999,0.000114685194,0.000107070075,0.000041155956,0.00024717912],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025812403,0.002004448,0.0011996466,0.001294103,0.0015103971,0.0011531003,0.0010092652,0.005470403,0.002756174],"category_scores_gemma":[0.0015919548,0.00095949223,0.0011831248,0.0007727245,0.0014686813,0.0017213877,0.001081045,0.0029231482,0.0008194693],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000069547554,0.00005385044,0.012299826,0.000036773203,0.000011912479,0.98181206,0.00028017833,0.00023333836,0.0020455904,0.0004920313,0.00041861043,0.0022462874],"study_design_scores_gemma":[0.000013324886,0.000053576314,0.0030445561,0.000010022454,0.0000064920614,0.9952455,0.00005246325,0.0003938686,0.00042973424,0.0003097034,0.00042781053,0.000012873235],"about_ca_topic_score_codex":0.001721427,"about_ca_topic_score_gemma":0.0015247406,"teacher_disagreement_score":0.005470403,"about_ca_system_score_codex":0.0011096399,"about_ca_system_score_gemma":0.00041141486,"threshold_uncertainty_score":0.009220362},"labels":[],"label_agreement":null},{"id":"W3139881147","doi":"","title":"Preparation of human TRAIL and its five receptors' gene probe","year":2005,"lang":"en","type":"article","venue":"","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CAE (Canada)","funders":"","keywords":"Receptor; Gene; Molecular biology; Biology; Immune receptor; DNA; Cell biology; Immunology; Computational biology; Genetics","score_opus":0.014793995897656002,"score_gpt":0.28878840860121907,"score_spread":0.27399441270356306,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3139881147","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40021813,0.006295181,0.5491588,0.0013723692,0.0010216932,0.0035401818,0.0085852705,0.0017050565,0.028103387],"genre_scores_gemma":[0.38310206,0.0049425936,0.50311774,0.0013026522,0.00023878085,0.0047342,0.041812245,0.00042209006,0.06032767],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99944466,0.00010595451,0.000039334955,0.0001675051,0.0001200718,0.0001223961],"domain_scores_gemma":[0.9997223,0.00007525514,0.00002805891,0.000048973376,0.00007364749,0.000051796836],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043986953,0.00069072546,0.00057540037,0.0006880996,0.0004546495,0.0002958017,0.00058257784,0.0007478077,0.008444049],"category_scores_gemma":[0.00054738537,0.000499121,0.0005374923,0.00051956554,0.00034852186,0.0003604278,0.00040294166,0.0014986413,0.0048875506],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001324801,0.00003459759,0.000094127376,0.00012114282,0.000006797385,0.00006862616,0.000046065557,0.000114749,0.99347734,0.0005767607,0.00041588378,0.0049113804],"study_design_scores_gemma":[0.00017608334,0.00068625936,0.0018024564,0.000053028874,0.000073198826,0.00076153694,0.000060312057,0.0011918334,0.9418766,0.00047067236,0.05281632,0.000031701635],"about_ca_topic_score_codex":0.00040635554,"about_ca_topic_score_gemma":0.00067974086,"teacher_disagreement_score":0.008444049,"about_ca_system_score_codex":0.00038110348,"about_ca_system_score_gemma":0.0006391101,"threshold_uncertainty_score":0.028248131},"labels":[],"label_agreement":null},{"id":"W3149167905","doi":"10.1101/2021.04.02.438201","title":"Enhanced cGAS-STING-dependent interferon signaling associated with mutations in ATAD3A","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Children's Hospital of Eastern Ontario; McGill University; McGill University Health Centre","funders":"MSDAVENIR; Universitair Ziekenhuis Gent; Fonds Wetenschappelijk Onderzoek; Agence Nationale de la Recherche; Vlaamse regering; Universiteit Gent; European Commission; National Institute for Health and Care Research","keywords":"Interferon; Biology; Mitochondrial DNA; Interferon type I; Gene knockdown; Stimulator of interferon genes; Mitochondrion; Mutation; Context (archaeology); Signal transduction; Gene; Phenotype; Cell biology; Genetics; Molecular biology; Immune system; Innate immune system","score_opus":0.013330543924832227,"score_gpt":0.2229756692232287,"score_spread":0.20964512529839646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3149167905","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966474,0.00033799815,0.0015960602,0.00018312818,0.00003053548,0.000012095592,0.0003574777,0.000060958406,0.0007743354],"genre_scores_gemma":[0.9983517,0.00007711043,0.0006617247,0.000057346962,0.0000117069985,0.000006817076,0.00019117587,0.000007967401,0.0006345309],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990666,0.000017053997,0.0000129269165,0.000026363063,0.000021474942,0.000015567251],"domain_scores_gemma":[0.99988806,0.000028431814,0.000034119676,0.000009727659,0.000009207758,0.000030508761],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000116591014,0.0003231597,0.00015970241,0.00030934653,0.00019440176,0.00020304289,0.00009569957,0.00042086557,0.0014621553],"category_scores_gemma":[0.00015351175,0.000075055934,0.00025155683,0.00017203136,0.00034418382,0.00007495894,0.00017563954,0.00047996448,0.0003658773],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024621462,0.000024793882,0.008256111,0.000034458106,0.000012542624,0.0045807995,0.000057335314,0.000074841206,0.9843849,0.00016378374,0.00024578223,0.0019184506],"study_design_scores_gemma":[0.00007811279,0.00039427262,0.11405516,0.000019630688,0.000051361647,0.06128954,0.0001643322,0.0017907372,0.8173795,0.0005620024,0.0042050052,0.00001028992],"about_ca_topic_score_codex":0.000294122,"about_ca_topic_score_gemma":0.00027479348,"teacher_disagreement_score":0.0014621553,"about_ca_system_score_codex":0.0002922439,"about_ca_system_score_gemma":0.00008501688,"threshold_uncertainty_score":0.0048913956},"labels":[],"label_agreement":null},{"id":"W3153999743","doi":"10.1111/imm.13334","title":"Can we treat inflammation by managing misbehaving monocytes?","year":2021,"lang":"en","type":"letter","venue":"Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Inflammation; Monocyte; Macrophage; Immunology; Biology; Cell biology; In vitro; Genetics","score_opus":0.013634766885537181,"score_gpt":0.23275107087340802,"score_spread":0.21911630398787083,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3153999743","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0008098614,0.046272587,0.0006873506,0.9202775,0.029292354,0.000025062376,0.000031421117,0.000067765555,0.0025361192],"genre_scores_gemma":[0.012814919,0.08498112,0.0025173144,0.79195225,0.09591134,0.0001348638,0.000049878436,0.000042633837,0.011595674],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989209,0.00032487398,0.00011754234,0.00013327817,0.0003600725,0.00014333175],"domain_scores_gemma":[0.9976986,0.0011687644,0.00020012503,0.00014838949,0.00045487017,0.0003291367],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002086307,0.00096025906,0.0013121814,0.0005188393,0.0014538836,0.002030988,0.0011725387,0.01602711,0.0044202157],"category_scores_gemma":[0.0076903002,0.0002623949,0.000974566,0.00032369187,0.0033161794,0.0044038976,0.0009984201,0.018532725,0.005512946],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041344127,0.00027815724,0.0014731978,0.0011726158,0.00010791989,0.007262241,0.00031869224,0.00027504668,0.003016997,0.013578674,0.8044332,0.1676698],"study_design_scores_gemma":[0.00027837526,0.0003086539,0.0011929092,0.0008135399,0.000063429856,0.008383232,0.00070043025,0.0003843317,0.0009593543,0.033378318,0.95345,0.0000875049],"about_ca_topic_score_codex":0.0010284563,"about_ca_topic_score_gemma":0.001816784,"teacher_disagreement_score":0.01602711,"about_ca_system_score_codex":0.0013309759,"about_ca_system_score_gemma":0.0013017694,"threshold_uncertainty_score":0.0147871375},"labels":[],"label_agreement":null},{"id":"W3155290787","doi":"10.1016/j.jaci.2021.03.045","title":"Multisystem inflammation and susceptibility to viral infections in human ZNFX1 deficiency","year":2021,"lang":"en","type":"article","venue":"Journal of Allergy and Clinical Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":87,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"National Institutes of Health; Helmut Horten Stiftung; Deutsches Zentrum für Lungenforschung; Bundesministerium für Bildung und Forschung; National Institute of Allergy and Infectious Diseases; Universität Zürich; Deutsche Forschungsgemeinschaft; E-Rare; National Institute of Diabetes and Digestive and Kidney Diseases; Novartis Foundation","keywords":"Interferon; Biology; Immunology; Immune system; Nucleic acid; Innate immune system; Primary immunodeficiency; Inflammation; Viral replication; Virology; Virus; Transcriptome; Immunity; Gene; Genetics; Gene expression","score_opus":0.021709314507688125,"score_gpt":0.3272106002698642,"score_spread":0.30550128576217606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3155290787","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992519,0.00028291953,0.00015161048,0.000039275124,0.0000035851424,0.000004054139,0.000060394483,0.000006896283,0.00019924488],"genre_scores_gemma":[0.99938905,0.00011359551,0.00012302579,0.000014083799,0.0000057916773,0.00000379223,0.000062130865,0.0000039547144,0.00028448712],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998462,0.000048334827,0.000018312234,0.00003884872,0.000024162653,0.000024017641],"domain_scores_gemma":[0.99956566,0.000103132064,0.00017924479,0.000025626445,0.000025439049,0.00010099918],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003058565,0.0007919446,0.00048343829,0.0011869096,0.00055028946,0.00040845526,0.00034663308,0.00062753545,0.0021112442],"category_scores_gemma":[0.00088648585,0.00032034135,0.00029681614,0.0005186415,0.0006319914,0.00030408084,0.0004408806,0.00044625663,0.00014851779],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.014271448,0.00058587187,0.76849234,0.00015151547,0.0003835,0.026306674,0.0012264395,0.0005678188,0.17336698,0.0005433194,0.0005257028,0.013578439],"study_design_scores_gemma":[0.00021030522,0.0011212947,0.9578526,0.000040229734,0.00029639836,0.030643662,0.00059216894,0.0011226819,0.0068440787,0.00044744916,0.00080122484,0.000027872597],"about_ca_topic_score_codex":0.0028399902,"about_ca_topic_score_gemma":0.0016723147,"teacher_disagreement_score":0.0028399902,"about_ca_system_score_codex":0.00030925157,"about_ca_system_score_gemma":0.0002173545,"threshold_uncertainty_score":0.0070628524},"labels":[],"label_agreement":null},{"id":"W3155579060","doi":"10.3389/fcell.2021.671067","title":"Crosstalk Between SUMO and Ubiquitin-Like Proteins: Implication for Antiviral Defense","year":2021,"lang":"en","type":"review","venue":"Frontiers in Cell and Developmental Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"Natural Sciences and Engineering Research Council of Canada; Agence Nationale de Recherches sur le Sida et les Hépatites Virales; Fonds de Recherche du Québec - Santé; Genome Canada; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"ISG15; SUMO protein; Ubiquitin; SUMO enzymes; Biology; Crosstalk; Cell biology; Interferon; Ubiquitin ligase; RNF4; Proteomics; Proteome; Interferon-stimulated gene; IRF3; Immunoprecipitation; NEDD8; Genetics; Gene; Zinc finger; Transcription factor; Innate immune system; Immune system","score_opus":0.02689259949377052,"score_gpt":0.2935474856498558,"score_spread":0.26665488615608524,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3155579060","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00010313507,0.9981687,0.00014097497,0.0003119647,0.0002741527,0.0000016828398,0.000010431701,0.000007322433,0.0009816887],"genre_scores_gemma":[0.0008882966,0.9975243,0.00017036429,0.0002012402,0.00035738162,0.000004023647,0.00002571471,0.0000017796123,0.0008269095],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998697,0.000022156699,0.0000153894,0.00002843742,0.000046403893,0.000017889697],"domain_scores_gemma":[0.99981767,0.000060948354,0.000024691677,0.000007721774,0.000053577187,0.000035435503],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040648822,0.000848939,0.0009646161,0.0016472215,0.0002445061,0.001058148,0.000815319,0.0012490959,0.00324952],"category_scores_gemma":[0.00040324795,0.00021236631,0.00028037664,0.002015231,0.0005372111,0.0017240733,0.00084657414,0.001636409,0.002472382],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009048402,0.000055605942,0.00015716231,0.008681024,0.000048904258,0.000251403,0.000055979035,0.00035894412,0.004416257,0.007305006,0.030236127,0.9483432],"study_design_scores_gemma":[0.000009497331,0.00005719523,0.0006775653,0.0014641267,0.000032375458,0.0011022962,0.000047187757,0.00007219474,0.000628791,0.0038095643,0.99208564,0.000013566014],"about_ca_topic_score_codex":0.00038804483,"about_ca_topic_score_gemma":0.00059192185,"teacher_disagreement_score":0.00324952,"about_ca_system_score_codex":0.0006920894,"about_ca_system_score_gemma":0.0008043239,"threshold_uncertainty_score":0.010870755},"labels":[],"label_agreement":null},{"id":"W3156531319","doi":"10.21873/cgp.20252","title":"MiR-139 Induces an Interferon-β Response in Prostate Cancer Cells by Binding to RIG-1","year":2021,"lang":"en","type":"article","venue":"Cancer Genomics & Proteomics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Sunnybrook Hospital; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"DU145; LNCaP; Prostate cancer; Transcriptome; Interferon; microRNA; Metastasis; Cancer research; Biology; Transfection; Cancer cell; Gene expression profiling; Immune system; Gene; Cancer; Medicine; Immunology; Gene expression; Internal medicine; Genetics","score_opus":0.01625582507930518,"score_gpt":0.2839424758432771,"score_spread":0.2676866507639719,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3156531319","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9891188,0.0029806423,0.0045343144,0.0001606596,0.0000763025,0.000052177496,0.0008371281,0.00014338888,0.0020964728],"genre_scores_gemma":[0.9928168,0.00085829105,0.0031735383,0.00012053465,0.00002060031,0.00003921533,0.0016467068,0.000024289306,0.0013000255],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998203,0.000025121131,0.000011556948,0.00002975017,0.00007428934,0.00003905767],"domain_scores_gemma":[0.9999051,0.000014949442,0.000032217125,0.000009747205,0.000018384148,0.000019663474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013786941,0.00031667022,0.00024519034,0.00019113273,0.00018491922,0.00027304373,0.00015412555,0.00020416208,0.0018628282],"category_scores_gemma":[0.000139811,0.00013954597,0.00039358588,0.00014102408,0.00015378058,0.00012138264,0.00025441337,0.0005278264,0.00069610524],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008916234,0.000015710555,0.00030055892,0.000037380934,0.0000054454977,0.000023861296,0.00000630229,0.00003056686,0.9987463,0.000031446605,0.00004066134,0.0006725191],"study_design_scores_gemma":[0.000014337263,0.00027436024,0.009452772,0.000008642532,0.000021909282,0.00033178838,0.00003693007,0.0007598754,0.9860999,0.0000559519,0.0029380964,0.0000055322007],"about_ca_topic_score_codex":0.00026032663,"about_ca_topic_score_gemma":0.0003408249,"teacher_disagreement_score":0.0018628282,"about_ca_system_score_codex":0.00028765597,"about_ca_system_score_gemma":0.00022711027,"threshold_uncertainty_score":0.006231785},"labels":[],"label_agreement":null},{"id":"W3158414904","doi":"10.1126/scisignal.aaw4673","title":"Pinpointing cysteine oxidation sites by high-resolution proteomics reveals a mechanism of redox-dependent inhibition of human STING","year":2021,"lang":"en","type":"article","venue":"Science Signaling","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Faculty of Medicine, Prince of Songkla University","keywords":"Cysteine; Chemistry; Signal transducing adaptor protein; Sting; Redox; Proteomics; Mechanism (biology); Ligand (biochemistry); Biochemistry; Biophysics; Cell biology; Signal transduction; Biology; Enzyme; Receptor; Organic chemistry","score_opus":0.015173970886526007,"score_gpt":0.2566694719272652,"score_spread":0.2414955010407392,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3158414904","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98967546,0.0009930343,0.007895124,0.00019980724,0.000036693775,0.000021235594,0.00023299873,0.000061006092,0.0008846549],"genre_scores_gemma":[0.99401593,0.00062891346,0.0038464202,0.000088738016,0.000007773165,0.000011899902,0.00023660377,0.000014007264,0.0011496926],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999404,0.000007696796,0.000005048568,0.00001701383,0.000014933781,0.0000149546895],"domain_scores_gemma":[0.99993753,0.000014307269,0.00001915302,0.000009028784,0.000008336336,0.000011540328],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013875477,0.00020966728,0.00013021099,0.00013098933,0.000120180135,0.0002491477,0.00020589567,0.00027091868,0.00085019495],"category_scores_gemma":[0.00015807149,0.00011064599,0.00018824363,0.0000871672,0.00019485308,0.0002359164,0.00010076251,0.0005602076,0.00019299296],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000092034636,0.000013286023,0.00014478569,0.000015241204,0.0000044560697,0.00002491381,0.000010722411,0.00006643169,0.9984238,0.00015988853,0.000028188673,0.0010164349],"study_design_scores_gemma":[0.000009326316,0.00006952017,0.0026473156,0.00000352723,0.000009254965,0.000118504686,0.000013658217,0.0012091605,0.99485284,0.00012564822,0.00093775283,0.0000035389355],"about_ca_topic_score_codex":0.00044507012,"about_ca_topic_score_gemma":0.0007503801,"teacher_disagreement_score":0.00085019495,"about_ca_system_score_codex":0.00024905865,"about_ca_system_score_gemma":0.00015281467,"threshold_uncertainty_score":0.0028442144},"labels":[],"label_agreement":null},{"id":"W3160574226","doi":"10.3389/fimmu.2021.609543","title":"Analysis of Porcine RIG-I Like Receptors Revealed the Positive Regulation of RIG-I and MDA5 by LGP2","year":2021,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Key Research and Development Program of China; Natural Science Foundation of Jiangsu Province; Government of Jiangsu Province; Priority Academic Program Development of Jiangsu Higher Education Institutions; Yangzhou University; National Natural Science Foundation of China","keywords":"MDA5; Innate immune system; RIG-I; Biology; RNA silencing; Cell biology; Virology; Receptor; Immune system; Molecular biology; RNA; Gene; RNA interference; Immunology; Genetics","score_opus":0.003825365645087441,"score_gpt":0.20949455751377768,"score_spread":0.20566919186869023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3160574226","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98807657,0.0017796803,0.0064968592,0.00016379639,0.000030045583,0.000025392797,0.0013082079,0.000047665606,0.002071742],"genre_scores_gemma":[0.9900665,0.00065947004,0.004332963,0.00015640321,0.000010226217,0.000029964449,0.002535579,0.000017991937,0.0021908185],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985623,0.000022374876,0.000012406363,0.000040830397,0.000026234628,0.000041880303],"domain_scores_gemma":[0.9999403,0.000011695797,0.000017461023,0.000010597485,0.000006796752,0.000013269807],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013236003,0.0002879935,0.00015547956,0.00024906293,0.0001313181,0.00023756664,0.00012360337,0.00030332225,0.0013326405],"category_scores_gemma":[0.000109217115,0.0000949092,0.00054923544,0.00014867904,0.00015618208,0.000230926,0.00018281039,0.00038949226,0.0005162745],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004956076,0.000004637331,0.00041310996,0.000016474982,0.0000025553807,0.00006390628,0.000008296062,0.000025054927,0.99895394,0.00004008863,0.000013443282,0.0004088882],"study_design_scores_gemma":[0.000009349686,0.0003624688,0.030726662,0.000014564773,0.000032407304,0.0015445038,0.00012852049,0.0018331496,0.9607016,0.000102197,0.004532027,0.000012600662],"about_ca_topic_score_codex":0.00039988384,"about_ca_topic_score_gemma":0.00046951036,"teacher_disagreement_score":0.0013326405,"about_ca_system_score_codex":0.00021889413,"about_ca_system_score_gemma":0.00010570399,"threshold_uncertainty_score":0.0044581294},"labels":[],"label_agreement":null},{"id":"W3160915383","doi":"10.1091/mbc.e21-02-0074","title":"Peroxisomes exhibit compromised structure and matrix protein content in SARS-CoV-2-infected cells","year":2021,"lang":"en","type":"article","venue":"Molecular Biology of the Cell","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Peroxisome; Biology; Cell biology; Matrix (chemical analysis); Viral matrix protein; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Viral protein; Virology; Biochemistry; Coronavirus disease 2019 (COVID-19); Virus; Gene","score_opus":0.011343743526356228,"score_gpt":0.24258703889183997,"score_spread":0.23124329536548374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3160915383","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923586,0.0014567283,0.0027629838,0.00019211647,0.000053262243,0.000026948961,0.00075889507,0.00008505334,0.00230539],"genre_scores_gemma":[0.99032074,0.00087339035,0.0024004278,0.00009441273,0.000014194881,0.000047055233,0.001986065,0.000019171948,0.0042445534],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981385,0.000027657637,0.00002079906,0.00003865315,0.0000675245,0.000031382322],"domain_scores_gemma":[0.9998691,0.000023706742,0.000027739103,0.000028005681,0.000020345404,0.00003095642],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012420403,0.00023815947,0.00025564106,0.00020884305,0.00024731917,0.00033104784,0.00013111341,0.0003772214,0.0014013267],"category_scores_gemma":[0.00009588336,0.00016963285,0.000271457,0.00021482915,0.00018278233,0.00021929103,0.0002839567,0.0005403862,0.0007232694],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005428235,0.000010021843,0.00023135202,0.000014710827,0.0000045122642,0.000107410204,0.000021837883,0.000012537786,0.9992742,0.0000285724,0.000017590275,0.00022298316],"study_design_scores_gemma":[0.000015455353,0.00023293051,0.028682569,0.000008113343,0.000016458824,0.0015535359,0.0001642042,0.0006715725,0.96550393,0.00007390852,0.0030674941,0.000009970745],"about_ca_topic_score_codex":0.0006122785,"about_ca_topic_score_gemma":0.0006771874,"teacher_disagreement_score":0.0014013267,"about_ca_system_score_codex":0.00020224298,"about_ca_system_score_gemma":0.00014505353,"threshold_uncertainty_score":0.0046879053},"labels":[],"label_agreement":null},{"id":"W3162551778","doi":"10.1101/2021.05.05.21256681","title":"A Prenylated dsRNA Sensor Protects Against Severe COVID-19 and is Absent in Horseshoe Bats","year":2021,"lang":"en","type":"preprint","venue":"medRxiv","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Medical Research Council; Wellcome Trust","keywords":"Prenylation; Biology; Virology; Interferon; Coronavirus; Genetics; Disease; Coronavirus disease 2019 (COVID-19); Medicine; Enzyme; Biochemistry","score_opus":0.026663104145378598,"score_gpt":0.2807331637815177,"score_spread":0.2540700596361391,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3162551778","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978636,0.0007248148,0.000489856,0.00010339193,0.000024131488,0.0000137551515,0.00016775176,0.0000336632,0.0005790251],"genre_scores_gemma":[0.9985531,0.00012711476,0.00024201848,0.000082167084,0.0000067050505,0.000011678803,0.0002054607,0.000005330816,0.0007665277],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999889,0.000019639583,0.000009080744,0.000033707667,0.000019764455,0.000028734634],"domain_scores_gemma":[0.99988973,0.000011827075,0.00004061494,0.000012683615,0.000011145275,0.000033895172],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014761393,0.00019818703,0.00024270768,0.00018446118,0.00015811762,0.00025010732,0.00014894738,0.00049404724,0.002068658],"category_scores_gemma":[0.00017346357,0.0001128473,0.00020562278,0.000057240242,0.00029183156,0.0001929212,0.00018474476,0.00045224407,0.00043685985],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038759824,0.00002237103,0.0014702501,0.000032620017,0.00000844785,0.00008130298,0.000021906222,0.00002746354,0.9967961,0.00005931604,0.000054740474,0.001037889],"study_design_scores_gemma":[0.00014569877,0.0031762966,0.17116974,0.000055558976,0.00007464408,0.002938634,0.00044513762,0.0018807534,0.8120379,0.00050198904,0.0075456505,0.000028024146],"about_ca_topic_score_codex":0.00023503472,"about_ca_topic_score_gemma":0.00029126427,"teacher_disagreement_score":0.002068658,"about_ca_system_score_codex":0.0002504192,"about_ca_system_score_gemma":0.000102927464,"threshold_uncertainty_score":0.0069203973},"labels":[],"label_agreement":null},{"id":"W3162732250","doi":"10.1096/fasebj.2021.35.s1.02385","title":"Palmitoylation of SARS‐CoV‐2 Spike Protein is prevented by Fatty Acid Synthase Inhibitors","year":2021,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Toronto; St. Michael's Hospital","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; St. Michael’s Hospital Foundation; California HIV/AIDS Research Program","keywords":"Palmitoylation; Coronavirus; Cytosol; Cell biology; Biology; HEK 293 cells; Protein domain; Biochemistry; Chemistry; Enzyme; Cysteine; Gene; Coronavirus disease 2019 (COVID-19)","score_opus":0.016537839469887048,"score_gpt":0.2587620557852252,"score_spread":0.24222421631533816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3162732250","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99392253,0.0019736444,0.001681024,0.00016671978,0.000059748938,0.000050976494,0.0005595662,0.00009575391,0.0014900847],"genre_scores_gemma":[0.99143386,0.0019343555,0.0023073582,0.000094177114,0.000017623983,0.000071663875,0.0013922864,0.00002421886,0.002724492],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998074,0.0000357839,0.000028476383,0.000029918081,0.000048768645,0.000049625247],"domain_scores_gemma":[0.99990785,0.000016703983,0.000023891234,0.000010061841,0.000016670467,0.000024878089],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016781637,0.0003067606,0.0004797319,0.00018404481,0.00016585019,0.00026020728,0.0002788954,0.00023230113,0.00090537884],"category_scores_gemma":[0.00013303,0.00015153964,0.0003588045,0.00019246481,0.00019405913,0.00016487417,0.00019828683,0.0005736483,0.00031772317],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00058468117,0.00011183856,0.00017180033,0.000064216874,0.000017769382,0.000037466547,0.000013129251,0.00013713728,0.9970798,0.00008372751,0.00010487941,0.0015936478],"study_design_scores_gemma":[0.000053191594,0.0004951296,0.0018020906,0.000008709662,0.000021644892,0.0000805521,0.00001852359,0.0011312105,0.9934335,0.000028062763,0.002922037,0.000005376573],"about_ca_topic_score_codex":0.001220132,"about_ca_topic_score_gemma":0.0020242347,"teacher_disagreement_score":0.001220132,"about_ca_system_score_codex":0.00032300662,"about_ca_system_score_gemma":0.00035463914,"threshold_uncertainty_score":0.0030287504},"labels":[],"label_agreement":null},{"id":"W3164313396","doi":"10.3389/fmicb.2021.675201","title":"Effect of Different Nuclear Localization Signals on the Subcellular Localization and Anti-HIV-1 Function of the MxB Protein","year":2021,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research; National Institutes of Health; National Key Research and Development Program of China; China Scholarship Council; National Natural Science Foundation of China","keywords":"NLS; Nuclear localization sequence; Capsid; Biology; Nuclear transport; Peptide sequence; Subcellular localization; Virology; Arginine; Virus; Cell biology; Gene; Genetics; Cell nucleus; Amino acid","score_opus":0.004113617622247869,"score_gpt":0.18835875081718634,"score_spread":0.18424513319493846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3164313396","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99737036,0.0010888826,0.0006186375,0.00004412654,0.00002083917,0.0000060519496,0.000057141468,0.000018897748,0.0007751062],"genre_scores_gemma":[0.99781644,0.0005623188,0.000835906,0.000028014876,0.000008394922,0.00001518478,0.00013829334,0.000008908387,0.0005865728],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998305,0.00005356751,0.000016289438,0.000031018848,0.000033246964,0.00003536324],"domain_scores_gemma":[0.99988997,0.000036920144,0.000023344945,0.000012395533,0.000009136991,0.000028196839],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022404267,0.00019539335,0.00020724782,0.000105778905,0.00011338229,0.00024306479,0.00019110013,0.00022831916,0.0012136804],"category_scores_gemma":[0.00016033363,0.00008618866,0.00017064012,0.00009264058,0.00027332685,0.00025057563,0.00015446071,0.00039103325,0.00017498576],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004980702,0.00004267792,0.00008132739,0.00003561306,0.0000028491845,0.00003248905,0.0000136884555,0.000044050008,0.9984218,0.00013418276,0.000014944129,0.0006783105],"study_design_scores_gemma":[0.00007370723,0.00067612407,0.0029750697,0.000008244956,0.000015321386,0.00017050115,0.00003773364,0.0010200469,0.9933815,0.00007668434,0.0015581166,0.0000070330357],"about_ca_topic_score_codex":0.00023542116,"about_ca_topic_score_gemma":0.00027224157,"teacher_disagreement_score":0.0012136804,"about_ca_system_score_codex":0.00018380737,"about_ca_system_score_gemma":0.00013830801,"threshold_uncertainty_score":0.004060149},"labels":[],"label_agreement":null},{"id":"W3165277981","doi":"10.1172/jci147834","title":"Rare loss-of-function variants in type I IFN immunity genes are not associated with severe COVID-19","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Genomics; McGill Genome Centre; McGill University; Jewish General Hospital","funders":"National Center for Advancing Translational Sciences; National Institute on Aging","keywords":"Biology; Gene; Exome sequencing; Genetics; Population; Candidate gene; Loss function; Coronavirus disease 2019 (COVID-19); Exome; Mutation; Disease; Medicine; Phenotype; Internal medicine","score_opus":0.10748775227812225,"score_gpt":0.36260536439297014,"score_spread":0.2551176121148479,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3165277981","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979482,0.0002345479,0.00042103103,0.000055808916,0.000008147271,0.000009268122,0.0006731311,0.000010358226,0.000639579],"genre_scores_gemma":[0.9989502,0.00007631392,0.00021877748,0.000043823522,0.000010508382,0.0000040127893,0.0005712099,0.000007813978,0.00011746431],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99927074,0.00010078343,0.000099466684,0.00026425498,0.00013144097,0.0001333789],"domain_scores_gemma":[0.9973152,0.0007172401,0.0011975139,0.00025050892,0.00019007253,0.0003293185],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063032546,0.00048028943,0.0004950034,0.000910321,0.0005881817,0.00068696315,0.0003866188,0.0005242367,0.0034230019],"category_scores_gemma":[0.0044853645,0.00023184707,0.0005496864,0.0008903612,0.0006176611,0.0003384405,0.00063945714,0.0006060263,0.00024649734],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005071989,0.000015200745,0.9880413,0.00003495353,0.00013761815,0.0013644254,0.00008508654,0.00007808091,0.00689656,0.000082876315,0.00017101836,0.002585739],"study_design_scores_gemma":[0.000022964028,0.000120640034,0.9919938,0.000025012634,0.00009180672,0.0051285364,0.00013254835,0.0002679706,0.0014231873,0.00018012844,0.0006042118,0.0000093439],"about_ca_topic_score_codex":0.0016850862,"about_ca_topic_score_gemma":0.002256652,"teacher_disagreement_score":0.0034230019,"about_ca_system_score_codex":0.00020310932,"about_ca_system_score_gemma":0.0001962631,"threshold_uncertainty_score":0.011451066},"labels":[],"label_agreement":null},{"id":"W3166120929","doi":"10.3390/v13061102","title":"HERC5 and the ISGylation Pathway: Critical Modulators of the Antiviral Immune Response","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; National Institutes of Health","keywords":"ISG15; Biology; Immune system; Ubiquitin ligase; Virology; Interferon; Ubiquitin; Intrinsic immunity; Innate immune system; Antiviral drug; Viral replication; Virus; Viral protein; Hepatitis C virus; Immunology; Gene; Genetics","score_opus":0.04132067381634929,"score_gpt":0.3311429949108011,"score_spread":0.28982232109445183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3166120929","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016211283,0.9976974,0.00010692179,0.00023711052,0.00030383287,0.0000034151594,0.000013677873,0.0000073994115,0.001468039],"genre_scores_gemma":[0.0008749151,0.99724066,0.00013827762,0.00020983859,0.00023112622,0.000005407049,0.000033935674,0.0000016063615,0.0012642787],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99991417,0.000012165889,0.000009682754,0.00001538618,0.00003463502,0.000013972716],"domain_scores_gemma":[0.999915,0.000029151232,0.000013512386,0.0000025269064,0.000023283606,0.000016654283],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029590944,0.00072473014,0.00068723166,0.0011538474,0.00020559259,0.00070543215,0.0006273408,0.00085498736,0.0027961791],"category_scores_gemma":[0.00026815615,0.0002174507,0.00025435007,0.0010576617,0.00029188942,0.00094102544,0.0005721374,0.0015350042,0.001961275],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009413649,0.000056187942,0.0001486387,0.009629815,0.000053345157,0.00022430895,0.00006406042,0.00045399458,0.0056457454,0.0069752294,0.03594274,0.94071186],"study_design_scores_gemma":[0.000007848301,0.00005255297,0.00034075507,0.0008281655,0.00002237684,0.00043078454,0.000023109713,0.00005006826,0.00046506297,0.0012283273,0.99654347,0.000007427072],"about_ca_topic_score_codex":0.0004925935,"about_ca_topic_score_gemma":0.0011392116,"teacher_disagreement_score":0.0027961791,"about_ca_system_score_codex":0.0005800649,"about_ca_system_score_gemma":0.0007297414,"threshold_uncertainty_score":0.0093541145},"labels":[],"label_agreement":null},{"id":"W3166534045","doi":"10.3389/fmicb.2021.677634","title":"Porcine RIG-I and MDA5 Signaling CARD Domains Exert Similar Antiviral Function Against Different Viruses","year":2021,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Priority Academic Program Development of Jiangsu Higher Education Institutions; National Natural Science Foundation of China","keywords":"MDA5; RIG-I; Cell biology; Biology; Function (biology); Receptor; Signal transduction; Gene; Virology; Genetics; RNA; Innate immune system; RNA interference","score_opus":0.008449788230555434,"score_gpt":0.21622800528054115,"score_spread":0.20777821704998573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3166534045","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9894909,0.0031857933,0.0035075159,0.00009950739,0.000039316154,0.00002508112,0.0010712786,0.00005946427,0.0025210534],"genre_scores_gemma":[0.99239784,0.0007002719,0.0032313243,0.00010417659,0.0000108467675,0.000022945203,0.0016584416,0.000011471743,0.0018625752],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99977344,0.00003843413,0.000023911429,0.000054946406,0.000040455943,0.00006882417],"domain_scores_gemma":[0.9999101,0.000017884091,0.000029040459,0.000012480488,0.000010085757,0.000020326997],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001712561,0.00026182013,0.0002348721,0.00021613193,0.00014167481,0.00049251347,0.00011653712,0.00032681413,0.0011459504],"category_scores_gemma":[0.00012447768,0.000107764325,0.00063446764,0.00015096678,0.00018741409,0.00029531788,0.00022964353,0.00044980334,0.00048483082],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000984331,0.0000118496055,0.00071884313,0.00004929728,0.000006101999,0.000036229238,0.000018528752,0.000043277432,0.9976387,0.00011480296,0.000027157383,0.0012367448],"study_design_scores_gemma":[0.000017649616,0.0007585351,0.047043234,0.000024869283,0.000049438102,0.00075703656,0.0001889385,0.0011260884,0.9434678,0.00012547405,0.006424598,0.00001625731],"about_ca_topic_score_codex":0.00028697442,"about_ca_topic_score_gemma":0.00028593038,"teacher_disagreement_score":0.0011459504,"about_ca_system_score_codex":0.00023762215,"about_ca_system_score_gemma":0.00012518284,"threshold_uncertainty_score":0.003833592},"labels":[],"label_agreement":null},{"id":"W3168718396","doi":"10.1002/cjp2.230","title":"<scp>STING</scp> pathway expression in low‐grade serous carcinoma of the ovary: an unexpected therapeutic opportunity?","year":2021,"lang":"en","type":"article","venue":"The Journal of Pathology Clinical Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Vancouver General Hospital; BC Cancer Agency","funders":"Canadian Institutes of Health Research; National Cancer Institute; BC Cancer Foundation; Canada Research Chairs","keywords":"Sting; Serous fluid; Innate immune system; Cancer research; Ovarian carcinoma; Biology; Ovarian cancer; Immunohistochemistry; Immune system; Medicine; Pathology; Immunology; Cancer; Internal medicine","score_opus":0.18976642725567294,"score_gpt":0.4311327282471293,"score_spread":0.24136630099145634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3168718396","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9247277,0.065887764,0.0028660086,0.0021930253,0.00013108367,0.000050850336,0.0001359255,0.000148247,0.00385939],"genre_scores_gemma":[0.98332214,0.013272993,0.0019302431,0.00045389883,0.00011220318,0.00002871066,0.00014540125,0.000013273377,0.000721089],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99995494,0.00001468547,0.000004301328,0.0000048157385,0.0000078485655,0.0000133667345],"domain_scores_gemma":[0.9999447,0.000008852459,0.000015789043,0.00000696912,0.000009272459,0.000014466224],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023700239,0.00012828801,0.00027257868,0.00020804489,0.00010486058,0.0003689871,0.00011467643,0.00019338218,0.00041137685],"category_scores_gemma":[0.00014957588,0.00006789697,0.00017668212,0.0002123801,0.00021474026,0.00025753208,0.000114080496,0.00029618095,0.00013790911],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027144626,0.00020269827,0.058757216,0.0016518455,0.00014380451,0.0037745691,0.00020667384,0.0005290078,0.6061142,0.0011149617,0.0025589482,0.3222316],"study_design_scores_gemma":[0.00095326244,0.009228765,0.3787181,0.0007998428,0.00096778676,0.042082775,0.0016333575,0.008882071,0.40933272,0.0053810254,0.14192772,0.00009244612],"about_ca_topic_score_codex":0.00024073536,"about_ca_topic_score_gemma":0.00064905273,"teacher_disagreement_score":0.00041137685,"about_ca_system_score_codex":0.0001858304,"about_ca_system_score_gemma":0.00021991835,"threshold_uncertainty_score":0.0013762116},"labels":[],"label_agreement":null},{"id":"W3169637611","doi":"10.2139/ssrn.3346986","title":"The STING-MSR1 Axis Controls RNA Virus Infection Through Noncanonical Autophagy","year":2019,"lang":"en","type":"article","venue":"SSRN Electronic Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Sting; Autophagy; Virology; Virus; Biology; RNA; Anti virus; Physics; Genetics; Gene","score_opus":0.00679902200735067,"score_gpt":0.24888976431989157,"score_spread":0.2420907423125409,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3169637611","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96413964,0.011362408,0.005693682,0.0007702916,0.0004378621,0.00003386682,0.0018756264,0.0009810644,0.014705564],"genre_scores_gemma":[0.9905758,0.001366632,0.0017136461,0.00013136794,0.00006502762,0.00001580432,0.00084536604,0.00007860423,0.0052077575],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997217,0.000032429718,0.000023399452,0.00008345278,0.00005463653,0.00008449748],"domain_scores_gemma":[0.9998049,0.000016947692,0.00007512482,0.000025116959,0.000026410053,0.00005148301],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023310784,0.00041461678,0.00036869175,0.0003757111,0.00038040514,0.001149386,0.00023794227,0.00041426872,0.0030926191],"category_scores_gemma":[0.00021037959,0.00019480032,0.00039067835,0.00014981654,0.00035273237,0.0006557713,0.0005533105,0.0008871678,0.0016733229],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005557935,0.000019532314,0.0013071,0.00008413977,0.000013324532,0.00013310199,0.00003729267,0.00017544247,0.9895699,0.0010849744,0.0006126806,0.0064068004],"study_design_scores_gemma":[0.00006811133,0.00034235645,0.044261087,0.00006786067,0.000051445248,0.0007078156,0.0002555779,0.0065290723,0.9287883,0.0020287419,0.016860632,0.000039019527],"about_ca_topic_score_codex":0.0002994881,"about_ca_topic_score_gemma":0.00077205175,"teacher_disagreement_score":0.0030926191,"about_ca_system_score_codex":0.00076417875,"about_ca_system_score_gemma":0.0003319682,"threshold_uncertainty_score":0.010345817},"labels":[],"label_agreement":null},{"id":"W3169678227","doi":"10.1016/j.jbc.2021.100856","title":"Crosstalk between nucleocytoplasmic trafficking and the innate immune response to viral infection","year":2021,"lang":"en","type":"review","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Fujian Medical University; Natural Science Foundation of Fujian Province","keywords":"Crosstalk; Innate immune system; Viral infection; Cell biology; Biology; Immune system; Virology; Immunology; Virus; Physics","score_opus":0.035393361351390616,"score_gpt":0.31394913078002656,"score_spread":0.27855576942863597,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3169678227","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00019525438,0.9978956,0.00019608477,0.00020531268,0.00027688008,0.000004571014,0.000013019125,0.000014306376,0.0011989606],"genre_scores_gemma":[0.00092742033,0.99771404,0.00019359936,0.00014470622,0.00020392277,0.000008277062,0.00002315783,0.0000017584807,0.0007831519],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998965,0.000016658501,0.000012504337,0.000020232363,0.00003817663,0.00001588718],"domain_scores_gemma":[0.99989855,0.000033206605,0.000016206495,0.0000032801163,0.000028700179,0.000020042797],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032146965,0.0008453215,0.0009773979,0.0015687025,0.0003088768,0.0008994738,0.00069667574,0.0008966168,0.0025424266],"category_scores_gemma":[0.00027715098,0.00024070506,0.00026471444,0.0016227267,0.00040714556,0.0012313536,0.00072706136,0.0014596699,0.0020412304],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008700377,0.00006127419,0.00013665912,0.013432963,0.000052219566,0.0002340399,0.00008187578,0.00049976626,0.0059271585,0.005971063,0.027395844,0.9461201],"study_design_scores_gemma":[0.000008622374,0.0000624124,0.00061539345,0.0015862089,0.000037380127,0.0006995255,0.000045528566,0.000081773185,0.00079986284,0.0023008438,0.99374914,0.0000133776775],"about_ca_topic_score_codex":0.00044512507,"about_ca_topic_score_gemma":0.0007841745,"teacher_disagreement_score":0.0025424266,"about_ca_system_score_codex":0.0006894946,"about_ca_system_score_gemma":0.00084076915,"threshold_uncertainty_score":0.008505285},"labels":[],"label_agreement":null},{"id":"W3169877630","doi":"10.1101/2021.06.04.446995","title":"Prior induction of cellular antiviral pathways limits frog virus 3 replication in two permissive <i>Xenopus laevis</i> skin epithelial-like cell lines","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada; University of Waterloo","keywords":"Biology; Xenopus; Permissiveness; Cell culture; Ranavirus; Proinflammatory cytokine; Cell biology; Cytopathic effect; Viral replication; Organ culture; Amphibian; In vitro; Virus; Virology; Immunology; Inflammation; Gene; Genetics","score_opus":0.015751886723506102,"score_gpt":0.2338001852139853,"score_spread":0.2180482984904792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3169877630","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98944396,0.0007707769,0.0049181776,0.00007881156,0.00003598109,0.00006347083,0.0014098189,0.00012719305,0.003151872],"genre_scores_gemma":[0.9834547,0.00047615138,0.006309684,0.00007022161,0.000015860045,0.00009195119,0.0035204522,0.000054995555,0.0060060294],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997782,0.00006447952,0.000028092156,0.000039059007,0.000050955085,0.000039137758],"domain_scores_gemma":[0.999864,0.00004829744,0.000022865936,0.00003297204,0.000014845188,0.000016963504],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025813413,0.0002562814,0.00019898666,0.00016267374,0.00016866997,0.0003432041,0.00023119808,0.00023517213,0.0018831734],"category_scores_gemma":[0.00013077517,0.00011564917,0.00027880713,0.00011760814,0.00017444967,0.00018240747,0.0002392152,0.00045504063,0.00069806766],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005301029,0.000015474925,0.00015331314,0.000013397976,0.0000022184474,0.000018351482,0.000012040097,0.000025612793,0.9993876,0.000051416002,0.000026410866,0.00024097196],"study_design_scores_gemma":[0.000007961226,0.00016638059,0.0032036905,0.0000036143986,0.00000541248,0.000108278924,0.00003263739,0.00037495536,0.9942557,0.0000126268405,0.0018259196,0.000002771969],"about_ca_topic_score_codex":0.00083981035,"about_ca_topic_score_gemma":0.00093034044,"teacher_disagreement_score":0.0018831734,"about_ca_system_score_codex":0.00024749915,"about_ca_system_score_gemma":0.00010998789,"threshold_uncertainty_score":0.0062998533},"labels":[],"label_agreement":null},{"id":"W3169885024","doi":"10.1101/2021.06.02.446854","title":"African swine fever virus structural protein p17 inhibits cGAS-STING signaling pathway through interacting with STING","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Key Research and Development Program of China; Priority Academic Program Development of Jiangsu Higher Education Institutions; National Natural Science Foundation of China","keywords":"Sting; IRF3; TANK-binding kinase 1; African swine fever virus; DNA virus; Stimulator of interferon genes; Virus; Biology; Virology; Innate immune system; Signal transduction; Endoplasmic reticulum; Cell biology; Gene; Immunology; Genetics; Immune system; MAPK/ERK pathway","score_opus":0.015736936710698857,"score_gpt":0.22264495765243247,"score_spread":0.2069080209417336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3169885024","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99440867,0.0028599577,0.0013726351,0.000118639895,0.000054243952,0.000020370988,0.00023956984,0.00003791731,0.0008880567],"genre_scores_gemma":[0.9962048,0.0009697784,0.00092607754,0.00007595599,0.000017255035,0.000025613603,0.000632778,0.000008056672,0.0011397701],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999076,0.000017915303,0.000007695794,0.000014155827,0.000018967265,0.00003361587],"domain_scores_gemma":[0.999946,0.000007515624,0.000014705829,0.000005329604,0.0000073609376,0.000019078187],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000100358135,0.00035823646,0.00018801243,0.00016374628,0.00019729749,0.00016467807,0.00011739447,0.00020927022,0.0012142533],"category_scores_gemma":[0.000097940785,0.000076424505,0.00041559146,0.00009144358,0.00019865205,0.00013704968,0.00017012689,0.0003705012,0.00027322158],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021822713,0.000054470896,0.0006380491,0.000084162784,0.0000110863875,0.00010941716,0.000011182689,0.000053724227,0.99755067,0.00006880515,0.00009977236,0.001100427],"study_design_scores_gemma":[0.00007908298,0.0008787199,0.018392239,0.000024913083,0.000043952547,0.00090282835,0.00007143721,0.0027163425,0.97040534,0.00014532094,0.0063298494,0.000009892423],"about_ca_topic_score_codex":0.00039287086,"about_ca_topic_score_gemma":0.00034285634,"teacher_disagreement_score":0.0012142533,"about_ca_system_score_codex":0.0001942063,"about_ca_system_score_gemma":0.00018233286,"threshold_uncertainty_score":0.004062116},"labels":[],"label_agreement":null},{"id":"W3172819735","doi":"10.1096/fasebj.24.1_supplement.638.11","title":"Transgenic Labeling of Chondrocyte and Osteoblast Lineages in <i>Xenopus laevis</i> Tadpoles","year":2010,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Metamorphosis; Biology; Cell biology; Tadpole (physics); Mesenchyme; Xenopus; Cartilage; Neural crest; Cellular differentiation; Chondrocyte; Mesoderm; Chondrogenesis; Anatomy; Mesenchymal stem cell; Embryonic stem cell; Embryo; Larva; Genetics","score_opus":0.007914100827722184,"score_gpt":0.2289408048664992,"score_spread":0.22102670403877703,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3172819735","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94359493,0.0020450891,0.036087897,0.0004099113,0.00014512846,0.00021660073,0.0026183445,0.0009149918,0.013967222],"genre_scores_gemma":[0.9099768,0.0037696538,0.04472894,0.00026985048,0.000041843454,0.00036089742,0.0027461636,0.0005966551,0.03750916],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979776,0.000018916082,0.00002141283,0.00007969089,0.000045317644,0.000036911355],"domain_scores_gemma":[0.99980694,0.00002329626,0.000085909225,0.000016997126,0.000028906908,0.000037930364],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017284574,0.00040040052,0.00022582765,0.0004895994,0.0003443097,0.00055958185,0.00038684814,0.00040387057,0.0021706098],"category_scores_gemma":[0.00009179348,0.00047067832,0.0003813528,0.00018082764,0.00043307192,0.00029281172,0.0002346194,0.00090887194,0.00078853255],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014497899,0.0000061915066,0.00011442285,0.000019269215,0.0000023215582,0.000030654377,0.000021416232,0.00002655629,0.9989196,0.00018222816,0.00003172636,0.0006312008],"study_design_scores_gemma":[0.000021398184,0.00014513994,0.004450311,0.000026207203,0.00003126077,0.0004095366,0.000087238375,0.00055104104,0.9870935,0.000050894625,0.0071242508,0.000009157856],"about_ca_topic_score_codex":0.003577325,"about_ca_topic_score_gemma":0.008099222,"teacher_disagreement_score":0.003577325,"about_ca_system_score_codex":0.00061173807,"about_ca_system_score_gemma":0.0002948396,"threshold_uncertainty_score":0.007261455},"labels":[],"label_agreement":null},{"id":"W3172838457","doi":"10.1200/jco.2021.39.15_suppl.tps2670","title":"A phase 1 dose-escalation study of intravenously (IV) administered TAK-676, a novel STING agonist, alone and in combination with pembrolizumab in patients (pts) with advanced or metastatic solid tumors.","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Oncology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Medicine; Tolerability; Pembrolizumab; Stimulator of interferon genes; Oncology; Agonist; Internal medicine; Immunotherapy; Sting; Immune system; Pharmacology; Cancer; Immunology; Innate immune system; Adverse effect; Receptor","score_opus":0.07458423942254296,"score_gpt":0.41165501651634934,"score_spread":0.3370707770938064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3172838457","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944008,0.0008814364,0.0006527185,0.0002351369,0.00010939523,0.001999987,0.0006143201,0.00007980447,0.0010263122],"genre_scores_gemma":[0.99146444,0.00080786675,0.0017418971,0.0004808445,0.00012544593,0.0022462455,0.0009512594,0.00002786235,0.002154264],"study_design_codex":"randomized_trial","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.9995548,0.00016356425,0.00002055769,0.00011717045,0.000045114597,0.00009866496],"domain_scores_gemma":[0.99933225,0.00008640897,0.00015151399,0.000071548704,0.00004221841,0.00031610462],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011684663,0.0017503976,0.002156568,0.00055579905,0.00043933254,0.0011282751,0.0007882821,0.0012985521,0.0033929294],"category_scores_gemma":[0.00091833924,0.00073098176,0.0012783788,0.00042567594,0.0010526247,0.0012721319,0.00038489338,0.004440586,0.00095325056],"study_design_candidate":"nonrandomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.67140216,0.16907723,0.0045703887,0.0006327026,0.0010939712,0.00025346823,0.000410937,0.003003767,0.07448633,0.00027920565,0.0022273383,0.07256256],"study_design_scores_gemma":[0.24011764,0.74335736,0.0074179396,0.000017461833,0.00038439565,0.00020743352,0.00006096186,0.001028365,0.005500469,0.0001817917,0.0016980594,0.000028203465],"about_ca_topic_score_codex":0.0005507859,"about_ca_topic_score_gemma":0.0012192915,"teacher_disagreement_score":0.0033929294,"about_ca_system_score_codex":0.0010095884,"about_ca_system_score_gemma":0.0013126313,"threshold_uncertainty_score":0.0113505125},"labels":[],"label_agreement":null},{"id":"W3173862775","doi":"10.4049/jimmunol.2100125","title":"Zebrafish Uba1 Degrades IRF3 through K48-Linked Ubiquitination to Inhibit IFN Production","year":2021,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Youth Innovation Promotion Association; National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"IRF3; Ubiquitin; Proteasome; Cell biology; Interferon regulatory factors; MG132; Transcription factor; Biology; Ubiquitin ligase; Zebrafish; Protein degradation; Proteasome inhibitor; Chemistry; Molecular biology; Biochemistry; Gene","score_opus":0.020331087275700682,"score_gpt":0.26623470575594294,"score_spread":0.24590361848024225,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3173862775","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9903446,0.0025183507,0.0045011924,0.00015961284,0.00004951705,0.00003551669,0.0005258062,0.00018803975,0.0016774095],"genre_scores_gemma":[0.9932243,0.00052183185,0.0023614247,0.000061212355,0.000007496073,0.000032163876,0.00031492344,0.00001878591,0.0034578373],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991906,0.0000066435223,0.0000066078214,0.000019083422,0.000021037558,0.000027616372],"domain_scores_gemma":[0.99994874,0.000004675912,0.000017234188,0.000007275394,0.000008526947,0.000013390867],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011640483,0.00041756412,0.00023781207,0.00020576516,0.0002684854,0.00016626233,0.00019750396,0.00027759472,0.0017033216],"category_scores_gemma":[0.00008539641,0.00014528679,0.00042816927,0.00009316388,0.00024139223,0.00020290974,0.00014842578,0.00039919408,0.0004891325],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007146593,0.000011688242,0.00014308468,0.000031418436,0.0000045526886,0.000022375829,0.000004348484,0.00004074457,0.9989618,0.00005106573,0.000050210827,0.0006072513],"study_design_scores_gemma":[0.000010571156,0.00010510545,0.0026504663,0.0000035607954,0.000010777928,0.00008894649,0.000008700963,0.00081714604,0.9952325,0.000040339382,0.0010278879,0.0000039963306],"about_ca_topic_score_codex":0.0016792775,"about_ca_topic_score_gemma":0.0023253527,"teacher_disagreement_score":0.0017033216,"about_ca_system_score_codex":0.0004954769,"about_ca_system_score_gemma":0.000338411,"threshold_uncertainty_score":0.005698204},"labels":[],"label_agreement":null},{"id":"W3174046803","doi":"10.2139/ssrn.3155555","title":"DNA Sequence Recognition of Human CXXC Domains and Their Structural Determinants","year":2018,"lang":"en","type":"article","venue":"SSRN Electronic Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; Structural Genomics Consortium; University of Toronto","funders":"","keywords":"Sequence (biology); Computational biology; DNA; Biology; Genetics","score_opus":0.017206672598855378,"score_gpt":0.2762025211942984,"score_spread":0.258995848595443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3174046803","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956326,0.0005616366,0.0017449263,0.00007430435,0.000029615057,0.000013938078,0.00009715562,0.000015680362,0.0018300741],"genre_scores_gemma":[0.99656737,0.00013684698,0.0010513874,0.00005456958,0.000012714861,0.000008714345,0.00028742672,0.0000034365028,0.0018775468],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991226,0.000024015015,0.000005673451,0.000020636988,0.000017242453,0.000020107858],"domain_scores_gemma":[0.99987686,0.000036244226,0.000029546602,0.000009043006,0.000012772655,0.000035541878],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000105547966,0.00016882877,0.00015112376,0.000086844135,0.00015648037,0.00014980356,0.00010815017,0.00023134713,0.0034882163],"category_scores_gemma":[0.00022955946,0.000069426904,0.00012708738,0.00008390054,0.0001242724,0.00010164777,0.00013827544,0.00026698216,0.0007230251],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003259654,0.000021915597,0.0007697751,0.00003199618,0.000004946956,0.00015648986,0.00002925943,0.00015046741,0.9942655,0.000637438,0.00010898665,0.0034972099],"study_design_scores_gemma":[0.000048863167,0.00049574586,0.02059518,0.00002415638,0.000014328131,0.0009308195,0.00006341045,0.002634838,0.97014356,0.00041482982,0.004621278,0.000013001869],"about_ca_topic_score_codex":0.00033322984,"about_ca_topic_score_gemma":0.00064112665,"teacher_disagreement_score":0.0034882163,"about_ca_system_score_codex":0.00021445646,"about_ca_system_score_gemma":0.00018718228,"threshold_uncertainty_score":0.011669219},"labels":[],"label_agreement":null},{"id":"W3174070368","doi":"10.15252/embr.202152547","title":"PML-NB-dependent type I interferon memory results in a restricted form of HSV latency","year":2021,"lang":"en","type":"article","venue":"EMBO Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; Medical Research Council; National Eye Institute; University of Pennsylvania; York University; Owens Family Foundation; National Institutes of Health; UK Research and Innovation","keywords":"Latency (audio); Interferon; Biology; Interferon type I; Virology; Neuroscience; Computer science","score_opus":0.015389801728660998,"score_gpt":0.25577721824435123,"score_spread":0.24038741651569023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3174070368","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99115175,0.001462024,0.0035553891,0.00013651866,0.0000614484,0.000014169285,0.0003706845,0.00026572443,0.0029823664],"genre_scores_gemma":[0.99805546,0.0001940374,0.0004752618,0.00002582415,0.0000112678645,0.000008312222,0.00017856462,0.00002747876,0.0010238504],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997787,0.000028572651,0.000025615633,0.000050550378,0.000037490838,0.00007903824],"domain_scores_gemma":[0.9996469,0.000048685168,0.00008608236,0.00013965099,0.000019430167,0.0000592644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022193146,0.00038092514,0.0003309273,0.00032936866,0.00026131884,0.0008722005,0.00046320012,0.00039621262,0.0022403682],"category_scores_gemma":[0.00039760274,0.00021856796,0.00037777566,0.00017854128,0.0005448182,0.00068785413,0.00068063155,0.0010797612,0.0010441227],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037201343,0.000027546206,0.0003937396,0.0000254039,0.000008258119,0.00014489976,0.000025713627,0.00006462901,0.9965077,0.0007577939,0.000062575986,0.0016095176],"study_design_scores_gemma":[0.00003099423,0.00014709444,0.005586125,0.0000074004697,0.000020476207,0.0011728036,0.00009797034,0.00051647006,0.990258,0.0006992552,0.0014570206,0.0000064424244],"about_ca_topic_score_codex":0.00025795674,"about_ca_topic_score_gemma":0.0002637634,"teacher_disagreement_score":0.0022403682,"about_ca_system_score_codex":0.00039122734,"about_ca_system_score_gemma":0.00020147562,"threshold_uncertainty_score":0.0074947476},"labels":[],"label_agreement":null},{"id":"W3174078272","doi":"10.4049/jimmunol.2000891","title":"Zebrafish otud6b Negatively Regulates Antiviral Responses by Suppressing K63-Linked Ubiquitination of irf3 and irf7","year":2021,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China; Chinese Academy of Sciences; National Natural Science Foundation of China","keywords":"IRF3; IRF7; Ubiquitin; Ubiquitin ligase; Cell biology; Zebrafish; Biology; Interferon regulatory factors; HEK 293 cells; Cancer research; Virology; Innate immune system; Immune system; Biochemistry; Genetics; Receptor; Gene","score_opus":0.011626682906441891,"score_gpt":0.2500328364113165,"score_spread":0.23840615350487462,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3174078272","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99329984,0.0018965206,0.0029121747,0.0001067038,0.000034562127,0.000011539076,0.00036828016,0.000089956586,0.0012803552],"genre_scores_gemma":[0.99456114,0.00039387975,0.0012334742,0.000042851967,0.0000038754247,0.000012782934,0.00026798807,0.000017217304,0.003466722],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999151,0.0000091677175,0.0000067803503,0.000021106021,0.000024220106,0.00002363848],"domain_scores_gemma":[0.9999285,0.000004832679,0.000028485481,0.0000059403587,0.0000083233035,0.000023958168],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008278141,0.0002713403,0.00020904448,0.00023051024,0.00023729634,0.00020901658,0.00017735508,0.00025989514,0.0012250469],"category_scores_gemma":[0.00007892566,0.00012460868,0.00020688967,0.000072939285,0.00028515232,0.00015455396,0.0002528985,0.00032171461,0.00025360595],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000075844815,0.0000048994666,0.00031653463,0.000022831804,0.0000021849503,0.00003538941,0.000007861086,0.00003320421,0.9986791,0.00007127612,0.00002521494,0.0007255857],"study_design_scores_gemma":[0.000020755662,0.00011873249,0.012623505,0.000010251992,0.000016273929,0.00020886766,0.000057938592,0.0013556224,0.9813867,0.00007664579,0.004117216,0.000007512688],"about_ca_topic_score_codex":0.0014314232,"about_ca_topic_score_gemma":0.0030770674,"teacher_disagreement_score":0.0014314232,"about_ca_system_score_codex":0.00036850653,"about_ca_system_score_gemma":0.00019260195,"threshold_uncertainty_score":0.0040982366},"labels":[],"label_agreement":null},{"id":"W3174340308","doi":"10.1096/fasebj.27.1_supplement.690.6","title":"Relapse of clinical symptoms in the acute experimental autoimmune encephalomyelitis (EAE) is adrenalectomy (ADX) time dependent in the Lewis rat","year":2013,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; St. Michael's Hospital","funders":"","keywords":"Experimental autoimmune encephalomyelitis; Medicine; Multiple sclerosis; Corticosterone; Encephalomyelitis; Immunology; Adrenalectomy; Immunization; Glucocorticoid; Immune system; Internal medicine","score_opus":0.017096006061524883,"score_gpt":0.29389034451633894,"score_spread":0.27679433845481405,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3174340308","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976071,0.00085593626,0.0003644448,0.000055556276,0.000026068246,0.000021020465,0.00018003101,0.000049575196,0.000840316],"genre_scores_gemma":[0.99503857,0.00083153433,0.0005074193,0.00006139896,0.000018332465,0.00005045466,0.00047418047,0.000012285109,0.0030057302],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998838,0.000012705548,0.000012944533,0.000025700743,0.00003143262,0.000033347907],"domain_scores_gemma":[0.99977905,0.000017472448,0.00007000059,0.000022944638,0.000021114483,0.00008946981],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013304828,0.00037041926,0.00030272105,0.00027315153,0.000113695074,0.00023572326,0.00010855043,0.00024261422,0.0015900113],"category_scores_gemma":[0.00013038282,0.00010171283,0.0002925458,0.000099645324,0.00023285262,0.00020052673,0.00016488312,0.00095285696,0.00033787166],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006753474,0.00023664908,0.0016959711,0.000059231654,0.00000964531,0.00017230352,0.000037717316,0.000030438565,0.9940148,0.00005480964,0.00006821086,0.0029450571],"study_design_scores_gemma":[0.000133412,0.016056044,0.11551907,0.000050242365,0.000073174815,0.0022486637,0.0002210156,0.00055008003,0.861611,0.00014380005,0.0033736438,0.000019816292],"about_ca_topic_score_codex":0.0003648491,"about_ca_topic_score_gemma":0.00079084054,"teacher_disagreement_score":0.0015900113,"about_ca_system_score_codex":0.00016017548,"about_ca_system_score_gemma":0.00018092783,"threshold_uncertainty_score":0.0053191185},"labels":[],"label_agreement":null},{"id":"W3175890696","doi":"10.1042/bcj20210366","title":"Characterization of caspase-7 interaction with RNA","year":2021,"lang":"en","type":"article","venue":"Biochemical Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"RNA; Cleave; Caspase; Cleavage (geology); Caspase 2; Cell biology; Biochemistry; Binding site; Proteolysis; Cysteine; Biology; Chemistry; Molecular biology; Programmed cell death; Apoptosis; Enzyme; Gene","score_opus":0.010212797659816567,"score_gpt":0.23615579871842995,"score_spread":0.2259430010586134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3175890696","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9779955,0.003295427,0.015679378,0.000114365845,0.000041190437,0.00007465257,0.00061977666,0.00007372319,0.0021059215],"genre_scores_gemma":[0.9795447,0.0015766618,0.012500484,0.00015380947,0.000031517884,0.00009846987,0.0027731985,0.00005713545,0.0032641443],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99950504,0.00009474681,0.000035130382,0.00011464254,0.00017381375,0.00007662659],"domain_scores_gemma":[0.9994966,0.00018127459,0.0001147318,0.000039272007,0.00009689982,0.000071190654],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029104715,0.00045124354,0.00027059368,0.00036565258,0.00018188731,0.00026706848,0.00034350427,0.00039568174,0.0014207932],"category_scores_gemma":[0.0004915667,0.00012994382,0.00039293602,0.00034137198,0.00015987763,0.00029663564,0.00016714165,0.0007602275,0.0007272215],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018767698,0.00001622167,0.00009982056,0.00002239419,0.0000037684713,0.000023361588,0.000008655139,0.0000396439,0.9993755,0.000020662175,0.000008455594,0.00036264598],"study_design_scores_gemma":[0.000004222338,0.00015820259,0.002147866,0.000004334133,0.0000106516345,0.00017921608,0.000018072913,0.000982746,0.9954619,0.000026772028,0.0010012772,0.000004633596],"about_ca_topic_score_codex":0.00022683218,"about_ca_topic_score_gemma":0.00024939323,"teacher_disagreement_score":0.0014207932,"about_ca_system_score_codex":0.00022666788,"about_ca_system_score_gemma":0.00012127019,"threshold_uncertainty_score":0.004753053},"labels":[],"label_agreement":null},{"id":"W3176428296","doi":"10.1101/2021.06.29.450442","title":"Epigenetic regulation of frog innate immunity: Discovery of frog microRNAs associated with antiviral responses and ranavirus infection using a <i>Xenopus laevis</i> skin epithelial-like cell line","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada; University of Waterloo","keywords":"Biology; Innate immune system; Xenopus; microRNA; Ranavirus; Interferon; Cell biology; Epigenetics; Wnt signaling pathway; Immunity; Amphibian; Signal transduction; Virus; Virology; Immune system; Immunology; Gene; Genetics","score_opus":0.012881340775384512,"score_gpt":0.22228669071379353,"score_spread":0.20940534993840904,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3176428296","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99374086,0.00071482966,0.0037729295,0.000043512628,0.000014385566,0.000034385,0.0007249567,0.000073874035,0.00088030304],"genre_scores_gemma":[0.9919709,0.00042806182,0.00468755,0.00005397645,0.000008807381,0.00005161858,0.0014806173,0.000026563213,0.00129192],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986553,0.000028034683,0.000014912811,0.000042245247,0.000028041582,0.00002127527],"domain_scores_gemma":[0.9998672,0.000027933687,0.00005374894,0.000017249211,0.000015268928,0.000018545717],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017634146,0.0002467967,0.00021113976,0.00019862026,0.00014131807,0.00027170687,0.00012003559,0.00017500427,0.0008185979],"category_scores_gemma":[0.0001306995,0.00014631308,0.0003117313,0.000131436,0.00013862278,0.00013213506,0.0001351066,0.00024570472,0.0002960302],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014867491,0.000002563506,0.00022169076,0.0000074409054,0.0000015616557,0.000010153135,0.000003702767,0.000011119298,0.99953616,0.000009480962,0.0000044401813,0.00017676144],"study_design_scores_gemma":[0.0000055172436,0.00024216784,0.020959608,0.0000032610585,0.000017310264,0.00031023726,0.000029763707,0.0006291247,0.9766148,0.000015132386,0.0011675466,0.000005656717],"about_ca_topic_score_codex":0.0003204687,"about_ca_topic_score_gemma":0.00050047756,"teacher_disagreement_score":0.0008185979,"about_ca_system_score_codex":0.00020137132,"about_ca_system_score_gemma":0.000097274446,"threshold_uncertainty_score":0.0027385354},"labels":[],"label_agreement":null},{"id":"W3176887844","doi":"10.1096/fasebj.25.1_supplement.941.6","title":"Kaposi¡s sarcoma‐associated herpesvirus degrades cellular TIR‐domain‐containing adaptor‐inducing beta interferon (TRIF)","year":2011,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"TRIF; Signal transducing adaptor protein; Ubiquitin ligase; Innate immune system; Cell biology; Ubiquitin; Lytic cycle; Interferon; Biology; Proteasome; Signal transduction; Virology; Toll-like receptor; Virus; Immunology; Immune system; Biochemistry; Gene","score_opus":0.04178714154233752,"score_gpt":0.23819146688398585,"score_spread":0.1964043253416483,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3176887844","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9869969,0.004781983,0.0050492487,0.00009184804,0.000050944756,0.000020327465,0.00042062465,0.00013487635,0.0024533041],"genre_scores_gemma":[0.9925189,0.0015647904,0.0021332686,0.00004727144,0.000015269296,0.000016227721,0.0006605465,0.000012787332,0.0030308936],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998734,0.000022371547,0.0000121300345,0.000022641108,0.000030316254,0.000039186638],"domain_scores_gemma":[0.99991024,0.00001266497,0.000031817297,0.000013167124,0.000011843017,0.000020328436],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001664603,0.00039730288,0.00018060052,0.0001921729,0.00010461898,0.00022952465,0.00009592671,0.000178661,0.0011231396],"category_scores_gemma":[0.000115988885,0.00010676532,0.00026129442,0.00007104399,0.00011685536,0.0002102356,0.00017345563,0.0003371599,0.0005083852],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008646548,0.000013247573,0.00019398172,0.000037270107,0.0000049791142,0.000042574185,0.000006323925,0.000036039466,0.99758255,0.00009823402,0.000047976533,0.0018502619],"study_design_scores_gemma":[0.000011129265,0.0002012272,0.006382351,0.0000068525605,0.000012081429,0.00084972475,0.000018470286,0.0006447747,0.98905504,0.00007928876,0.0027346287,0.000004501628],"about_ca_topic_score_codex":0.00015741315,"about_ca_topic_score_gemma":0.00019341242,"teacher_disagreement_score":0.0011231396,"about_ca_system_score_codex":0.0001829274,"about_ca_system_score_gemma":0.00012518726,"threshold_uncertainty_score":0.0037572384},"labels":[],"label_agreement":null},{"id":"W3177110503","doi":"10.25011/cim.v44i2.36622","title":"The Role of Type III Interferons in Human Disease","year":2021,"lang":"en","type":"review","venue":"Clinical and investigative medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Servier","keywords":"Disease; Medicine; Immunology; Pandemic; Cytokine; Interferon; Therapeutic approach; Coronavirus disease 2019 (COVID-19); Bioinformatics; Infectious disease (medical specialty); Biology; Internal medicine","score_opus":0.1776074689337581,"score_gpt":0.4124540721847657,"score_spread":0.23484660325100762,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3177110503","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00039697008,0.9975694,0.00015547365,0.0006656102,0.00028612211,0.0000050447206,0.000029870076,0.000004540017,0.00088708464],"genre_scores_gemma":[0.008265083,0.98952323,0.0002835362,0.0007243525,0.00077099015,0.000018184734,0.00003800687,0.000002200889,0.00037441726],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99934024,0.00025136344,0.00012638433,0.00006812165,0.00017299056,0.00004083245],"domain_scores_gemma":[0.9990706,0.00047614257,0.0002493448,0.000030040961,0.0001382463,0.000035634777],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010743681,0.00050454366,0.0010431644,0.001121522,0.00018671436,0.001179643,0.00028940578,0.0007143558,0.0028712826],"category_scores_gemma":[0.0016011106,0.00010224368,0.00051970227,0.0016010054,0.00054878177,0.0008185363,0.00042349036,0.00078124733,0.0007897801],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038340795,0.00004927304,0.003480651,0.053506326,0.0005183272,0.001274579,0.00043804024,0.00037728058,0.0063897036,0.008225903,0.024913598,0.9004429],"study_design_scores_gemma":[0.00007140608,0.0003210932,0.009952114,0.040993705,0.00083097763,0.006861554,0.00062511535,0.00017438116,0.0027882496,0.010985996,0.9263594,0.000035974295],"about_ca_topic_score_codex":0.0005354676,"about_ca_topic_score_gemma":0.00045002057,"teacher_disagreement_score":0.0028712826,"about_ca_system_score_codex":0.00046645483,"about_ca_system_score_gemma":0.0014754054,"threshold_uncertainty_score":0.009605348},"labels":[],"label_agreement":null},{"id":"W3178924910","doi":"","title":"Construction of pCMV- myd88 and pCMV- traf6 Eukaryotic Expression Vectors in Zebrafish ( Danio rerio )","year":2020,"lang":"en","type":"article","venue":"International Journal of Aquaculture","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Zebrafish; Biology; Gene; Reporter gene; Expression vector; Cell biology; Genetics; Molecular biology; Gene expression; Recombinant DNA","score_opus":0.011076641807697976,"score_gpt":0.23982065451568874,"score_spread":0.22874401270799077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3178924910","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.78837925,0.0059601367,0.14881092,0.0010655082,0.0011104454,0.0032790725,0.033663604,0.0026998844,0.015031223],"genre_scores_gemma":[0.7095725,0.0051995125,0.16759337,0.00039640095,0.00014714645,0.0042296015,0.06438194,0.0008402131,0.047639288],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990121,0.00011387529,0.0001426424,0.0002439115,0.0003214895,0.00016588773],"domain_scores_gemma":[0.9997955,0.000032146418,0.0000527389,0.000039297985,0.00003157107,0.00004879216],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008661349,0.00085433014,0.0007235459,0.0007879238,0.000623096,0.00047362063,0.0013162456,0.00080964674,0.0035270448],"category_scores_gemma":[0.0003467997,0.0007013936,0.00073091564,0.00091303774,0.00051245815,0.00049846363,0.0007708005,0.0018532446,0.0030198467],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015619547,0.0000918373,0.00017953455,0.00025279197,0.000013756092,0.000113430855,0.00013007628,0.00019905684,0.99363756,0.0011071651,0.0005843544,0.0035342874],"study_design_scores_gemma":[0.00023772036,0.000502525,0.0042622318,0.00006675268,0.00007701343,0.000776464,0.00009651894,0.004592343,0.93477505,0.00029677802,0.054265007,0.000051583804],"about_ca_topic_score_codex":0.00152421,"about_ca_topic_score_gemma":0.0020781285,"teacher_disagreement_score":0.0035270448,"about_ca_system_score_codex":0.0008392876,"about_ca_system_score_gemma":0.00047071604,"threshold_uncertainty_score":0.011799157},"labels":[],"label_agreement":null},{"id":"W3180532026","doi":"10.1016/j.xpro.2021.100649","title":"Protocol for nuclear export signal characterization of cGAS in mammalian cells","year":2021,"lang":"en","type":"article","venue":"STAR Protocols","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research; Chinese Academy of Medical Sciences; Chinese Academy of Meteorological Sciences; Ministry of Science and Technology of the People's Republic of China; National Natural Science Foundation of China","keywords":"Nuclear export signal; Cytoplasm; Cell biology; Nuclear localization sequence; Biology; Subcellular localization; Mutagenesis; Cell fractionation; Vaccinia; Cell nucleus; Molecular biology; Biochemistry; Mutation; Gene; Recombinant DNA; Enzyme","score_opus":0.03186924324755326,"score_gpt":0.31308329170783317,"score_spread":0.2812140484602799,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3180532026","genre_codex":"methods","genre_gemma":"protocol","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"protocol","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.041535728,0.0064708465,0.7491804,0.00128988,0.0024322043,0.021428332,0.12203239,0.016937114,0.038693175],"genre_scores_gemma":[0.05512931,0.007846273,0.4226644,0.0011158503,0.000320973,0.059953853,0.35581598,0.0056826747,0.09147062],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99821484,0.00030762397,0.00028827332,0.00046032658,0.00048313866,0.00024575606],"domain_scores_gemma":[0.9991394,0.00017309375,0.000039932744,0.00033505054,0.00022509144,0.00008736015],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015145072,0.002180405,0.0021022132,0.002131078,0.0022174919,0.0011092663,0.0024414025,0.00097595796,0.04855017],"category_scores_gemma":[0.0012325987,0.0020083408,0.0018233247,0.0018592691,0.0006656668,0.0007628553,0.0012585608,0.0044389963,0.048935026],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061168923,0.00030374547,0.0003436951,0.0014296504,0.0000852408,0.00049194874,0.00033221242,0.0006383742,0.9449148,0.0041170516,0.026232803,0.020498786],"study_design_scores_gemma":[0.00035880378,0.0004867751,0.0032329028,0.00022446291,0.0001447328,0.0008961719,0.00010400164,0.002567627,0.44786322,0.0021860867,0.5417748,0.00016051075],"about_ca_topic_score_codex":0.0016100476,"about_ca_topic_score_gemma":0.003733887,"teacher_disagreement_score":0.04855017,"about_ca_system_score_codex":0.00094649877,"about_ca_system_score_gemma":0.0012379775,"threshold_uncertainty_score":0.16241646},"labels":[],"label_agreement":null},{"id":"W3181410333","doi":"10.1101/2021.07.09.21260221","title":"Genetic regulation of <i>OAS1</i> nonsense-mediated decay underlies association with risk of severe COVID-19","year":2021,"lang":"en","type":"preprint","venue":"medRxiv","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto; University Health Network","funders":"Center for Clinical and Translational Science, University of Alabama at Birmingham; National Institutes of Health; Deutsche Forschungsgemeinschaft; Hellenic Foundation for Research and Innovation; European Commission; Oxford Nanopore Technologies; Division of Cancer Epidemiology and Genetics, National Cancer Institute; Bundesministerium für Bildung und Forschung; Wayne and Gladys Valley Foundation; University of Alabama at Birmingham; National Human Genome Research Institute; University of Alabama; National Cancer Institute; Genomic Health; Kaiser Permanente; Frederick National Laboratory for Cancer Research; Robert Wood Johnson Foundation; Ellison Medical Foundation","keywords":"Haplotype; Locus (genetics); Genetics; Allele; Biology; Gene","score_opus":0.013715435054679877,"score_gpt":0.2429850945255829,"score_spread":0.22926965947090303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3181410333","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99733835,0.00023888535,0.0011917552,0.00014546877,0.000022294833,0.00000770596,0.000550696,0.00002650813,0.0004782384],"genre_scores_gemma":[0.99879897,0.000057835925,0.0003676843,0.00004834465,0.000020928113,0.0000047604735,0.00034186177,0.00001665665,0.00034287068],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99972576,0.00008502705,0.00003575001,0.00008562106,0.00003433772,0.000033455777],"domain_scores_gemma":[0.99942124,0.0001444518,0.00028534245,0.000051108123,0.000027369697,0.00007048187],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032948863,0.00041640378,0.0002810956,0.00031137338,0.00018846507,0.000357382,0.00020810899,0.00046545168,0.0048340554],"category_scores_gemma":[0.0007373755,0.00009285168,0.00042275182,0.00028919947,0.00025933053,0.000097401426,0.00020775372,0.00044069532,0.00043216633],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0055804243,0.00021692124,0.59999424,0.0001396415,0.00091439544,0.0024715844,0.0002264164,0.00089811266,0.37249932,0.0008148453,0.0011630696,0.015081018],"study_design_scores_gemma":[0.00014641993,0.0005336658,0.968123,0.000046070047,0.0003342208,0.0039869808,0.00011822657,0.0025432094,0.021490205,0.00082837394,0.0018282143,0.000021497854],"about_ca_topic_score_codex":0.00076980516,"about_ca_topic_score_gemma":0.0004986751,"teacher_disagreement_score":0.0048340554,"about_ca_system_score_codex":0.000115764924,"about_ca_system_score_gemma":0.00009069215,"threshold_uncertainty_score":0.016171515},"labels":[],"label_agreement":null},{"id":"W3181895160","doi":"10.1158/1538-7445.am2021-1708","title":"Abstract 1708: Improving genotype specific chemotherapy response in ovarian cancer via cGAS-STING pathway activation","year":2021,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agricultural Research Institute of Ontario; University of Ottawa; Queen's University","funders":"","keywords":"Cancer research; Immune system; PTEN; Tumor microenvironment; Biology; Immune checkpoint; Ovarian cancer; CXCL10; Chemokine; CD8; Immunology; Immunotherapy; Cancer; Apoptosis; PI3K/AKT/mTOR pathway","score_opus":0.060980450235424845,"score_gpt":0.36013798734740643,"score_spread":0.29915753711198156,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3181895160","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99634945,0.0011385407,0.00078511366,0.0001297148,0.00004895719,0.0000592898,0.00025522136,0.00009382741,0.0011398807],"genre_scores_gemma":[0.9967585,0.00053164776,0.00093371805,0.000072907846,0.000011948894,0.0000548697,0.0003188142,0.000007779373,0.001309805],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999405,0.000007204261,0.000004991702,0.0000100721845,0.000015535996,0.00002174982],"domain_scores_gemma":[0.99996924,0.0000026406672,0.000009074044,0.0000027660183,0.000002984163,0.000013359763],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007874404,0.00021961852,0.0002156996,0.00022351374,0.00007669924,0.00015599321,0.00014951629,0.00018278878,0.0021596772],"category_scores_gemma":[0.000078397876,0.00006329019,0.00016889494,0.00013213973,0.00011137097,0.00012242848,0.0001521412,0.00043819973,0.000287648],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010301621,0.00049036735,0.0011169424,0.00017972499,0.000020305495,0.00008108963,0.0000278237,0.00038960515,0.9734127,0.00019071874,0.00052129664,0.02253914],"study_design_scores_gemma":[0.0005773075,0.010767836,0.020537797,0.000040260245,0.00011394658,0.00082915294,0.00008540049,0.004231732,0.9506459,0.0002769347,0.011879106,0.000014656187],"about_ca_topic_score_codex":0.00027119572,"about_ca_topic_score_gemma":0.0005792773,"teacher_disagreement_score":0.0021596772,"about_ca_system_score_codex":0.00018951582,"about_ca_system_score_gemma":0.00024390145,"threshold_uncertainty_score":0.007224858},"labels":[],"label_agreement":null},{"id":"W3184580383","doi":"10.1101/2021.07.23.453513","title":"IFITM3 regulates virus-induced inflammatory cytokine production by titrating Nogo-B orchestration of TLR responses","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Chinese Academy of Medical Sciences; Cardiff University; Medical Research Council; National Institute for Health and Care Research; Wellcome Trust","keywords":"Cytokine; Pathogenesis; Cell biology; Viral pathogenesis; Immune system; Biology; Immunology; Virus; Viral replication","score_opus":0.015743679015908472,"score_gpt":0.22765751462465142,"score_spread":0.21191383560874294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3184580383","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.982679,0.0020270245,0.009054874,0.00037744365,0.0001549126,0.000035722132,0.0013415662,0.00029671926,0.0040326845],"genre_scores_gemma":[0.9900239,0.000492642,0.0053419364,0.000104521976,0.00001883761,0.000039230483,0.0009426839,0.00008323465,0.0029529587],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998921,0.0000151295335,0.000009487171,0.000022773022,0.00002936362,0.000031155036],"domain_scores_gemma":[0.9999604,0.000004905205,0.000011535002,0.000005846469,0.0000052772375,0.000012018493],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016726505,0.00025416826,0.00017168953,0.00015546444,0.00019249253,0.00038322623,0.00016965452,0.00026811144,0.0018757613],"category_scores_gemma":[0.00009861836,0.00008098138,0.00022076901,0.00011476166,0.0002566844,0.00015937793,0.00023242475,0.00067359675,0.00066989486],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000872712,0.00000886065,0.00012855334,0.00001910802,0.0000024042865,0.000022466662,0.000007899893,0.000051641866,0.998679,0.00018019763,0.00007807675,0.000734572],"study_design_scores_gemma":[0.000015094921,0.000046372166,0.0016978548,0.000005629092,0.000005669537,0.00010586742,0.000024814415,0.0012013862,0.9929755,0.00015648355,0.0037620019,0.0000032933615],"about_ca_topic_score_codex":0.00042554835,"about_ca_topic_score_gemma":0.0005228013,"teacher_disagreement_score":0.0018757613,"about_ca_system_score_codex":0.00035364623,"about_ca_system_score_gemma":0.00023621348,"threshold_uncertainty_score":0.006275058},"labels":[],"label_agreement":null},{"id":"W3185608026","doi":"10.3389/fimmu.2021.644310","title":"Editorial: Sensing DNA in Antiviral Innate Immunity","year":2021,"lang":"en","type":"editorial","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Jewish General Hospital; McGill University","funders":"Canadian Institutes of Health Research; National Natural Science Foundation of China; American Heart Association","keywords":"Innate immune system; Immunology; Viral infection; Immunity; Virology; Medicine; Biology; Virus; Immune system","score_opus":0.005837801148089841,"score_gpt":0.2382867784233538,"score_spread":0.23244897727526395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3185608026","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000040835712,0.0034235604,0.00010729862,0.024690954,0.9694642,0.000020008272,0.00006352106,0.000069789196,0.0021198976],"genre_scores_gemma":[0.0005324155,0.003222365,0.00010504641,0.019243645,0.959781,0.000020890324,0.000049815855,0.00004056626,0.017004177],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99774593,0.00036733362,0.00021634955,0.0003094177,0.0011497807,0.00021109953],"domain_scores_gemma":[0.9933303,0.0017052263,0.00047990738,0.00019213521,0.0023832284,0.0019092356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0041833343,0.004380725,0.0023855485,0.0024312888,0.0025564462,0.0049363407,0.0026725344,0.009463441,0.026328437],"category_scores_gemma":[0.00988397,0.00094135094,0.0020077396,0.0007551879,0.0015911374,0.003959969,0.0015262498,0.013281497,0.022044808],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004906603,0.000010834781,0.00001532951,0.000103936116,0.0000081659355,0.000073962474,0.000005555063,0.000020110176,0.00008734662,0.00021196093,0.99503493,0.0043787546],"study_design_scores_gemma":[0.00006006452,0.000036236514,0.00015803355,0.0001789751,0.000026175563,0.00021213159,0.000023679086,0.000111120855,0.00019979506,0.0010286147,0.99794954,0.000015798498],"about_ca_topic_score_codex":0.0007795209,"about_ca_topic_score_gemma":0.002118884,"teacher_disagreement_score":0.026328437,"about_ca_system_score_codex":0.0021594781,"about_ca_system_score_gemma":0.0017483849,"threshold_uncertainty_score":0.088077426},"labels":[],"label_agreement":null},{"id":"W3188830196","doi":"10.1007/s12041-021-01310-5","title":"Homozygosity mapping coupled with whole-exome sequencing and protein modelling identified a novel missense mutation in GUCY2D in a consanguineous Pakistani family with Leber congenital amaurosis","year":2021,"lang":"en","type":"article","venue":"Journal of Genetics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Centre for Addiction and Mental Health","funders":"","keywords":"GUCY2D; Biology; Genetics; Missense mutation; Disease gene identification; Exome sequencing; Genetic heterogeneity; Exome; Retinitis pigmentosa; Sanger sequencing; Mutation; Gene; Phenotype","score_opus":0.02459788882028673,"score_gpt":0.22728734452122587,"score_spread":0.20268945570093913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3188830196","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954572,0.00033786503,0.0017502641,0.0005018219,0.0001102764,0.00003059165,0.00058401003,0.00006992262,0.0011581366],"genre_scores_gemma":[0.9985083,0.000069835114,0.00078755425,0.00013408758,0.000033516397,0.0000066974385,0.00012379886,0.00001598265,0.00032017962],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.9995875,0.000041269323,0.000052186886,0.00015810376,0.00008997937,0.00007099962],"domain_scores_gemma":[0.9993419,0.00031776188,0.00011750489,0.000025892106,0.000036430178,0.00016055438],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019761284,0.001651673,0.0006483881,0.0013342942,0.0011534173,0.00065847335,0.0005871273,0.002013106,0.0024799153],"category_scores_gemma":[0.0011677236,0.00029681783,0.00070945907,0.0009874033,0.0010038491,0.00024310395,0.00072156073,0.00094688125,0.00037495286],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034432177,0.00007059027,0.034176428,0.000069757414,0.000086902975,0.87691563,0.0006371694,0.00039440976,0.08179214,0.0004860114,0.0005438055,0.0044829035],"study_design_scores_gemma":[0.00013040297,0.00032381748,0.106939934,0.00006369664,0.00028884105,0.86215943,0.00059653114,0.0030620263,0.022314627,0.0006317327,0.0034128814,0.00007614379],"about_ca_topic_score_codex":0.00270827,"about_ca_topic_score_gemma":0.0031411513,"teacher_disagreement_score":0.00270827,"about_ca_system_score_codex":0.00048360677,"about_ca_system_score_gemma":0.00037101336,"threshold_uncertainty_score":0.008296132},"labels":[],"label_agreement":null},{"id":"W3189384720","doi":"10.21203/rs.3.rs-779200/v1","title":"Integrated Analysis of microRNAs and Metabolomics in Rat’s Serum Reveals Multi-action Modes of Qingfei Paidu Decoction for COVID-19 Treatment","year":2021,"lang":"en","type":"preprint","venue":"Research Square","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Decoction; Coronavirus disease 2019 (COVID-19); Traditional medicine; microRNA; Action (physics); Medicine; Pharmacology; Biology; Internal medicine; Disease; Biochemistry; Gene","score_opus":0.1873242006080253,"score_gpt":0.4536758658618673,"score_spread":0.266351665253842,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3189384720","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9881903,0.005586033,0.0041626124,0.00015085985,0.00008073153,0.00008488757,0.0007956962,0.00009006484,0.0008588935],"genre_scores_gemma":[0.99205667,0.0022628056,0.0031347126,0.00023664939,0.00001964078,0.00010573446,0.000560783,0.000019598792,0.0016034167],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998987,0.00001263476,0.0000075825733,0.00002558911,0.00003256477,0.000022919608],"domain_scores_gemma":[0.99993587,0.000008677766,0.000018575509,0.000004896737,0.000015235258,0.00001669499],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001994587,0.00039106194,0.0005029308,0.00039635124,0.00017352842,0.00018805098,0.00013200106,0.00021589898,0.00095774274],"category_scores_gemma":[0.00013774156,0.00014243105,0.00048461065,0.00020657979,0.00019481109,0.00018560496,0.00014818495,0.0004739553,0.00012405714],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015032549,0.0001645271,0.0033621544,0.00027556284,0.000066213324,0.00008124961,0.000034901725,0.00018277536,0.98016787,0.000095384115,0.00023716949,0.013828936],"study_design_scores_gemma":[0.00023449592,0.006738721,0.06713799,0.00003699142,0.00035543903,0.00036194338,0.00013557663,0.0035046197,0.9144751,0.00026975566,0.006694038,0.00005537073],"about_ca_topic_score_codex":0.0007049331,"about_ca_topic_score_gemma":0.0013649103,"teacher_disagreement_score":0.00095774274,"about_ca_system_score_codex":0.00016933291,"about_ca_system_score_gemma":0.00029345928,"threshold_uncertainty_score":0.003203988},"labels":[],"label_agreement":null},{"id":"W3190000798","doi":"10.2139/ssrn.3866840","title":"DDX41 Is Required to Activate and Modulate cGAS-STING Activation","year":2021,"lang":"en","type":"article","venue":"SSRN Electronic Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saskatchewan Cancer Agency; University of Saskatchewan","funders":"","keywords":"Sting; Cell biology; Chemistry; Biology; Engineering","score_opus":0.011125356915444412,"score_gpt":0.2506661964405982,"score_spread":0.23954083952515376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3190000798","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992916,0.0010913989,0.0017920667,0.00019590055,0.000090309324,0.000024415174,0.00048809938,0.00016397539,0.0032379066],"genre_scores_gemma":[0.99438006,0.00024729432,0.0008637143,0.00006986069,0.000013935168,0.000023060866,0.0009367969,0.00004223314,0.0034230563],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995832,0.00007478239,0.000043610948,0.00008741813,0.00009469287,0.00011626935],"domain_scores_gemma":[0.999788,0.000051058418,0.00005367062,0.000050942366,0.000018109853,0.000038264152],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020014147,0.00046970753,0.00039435658,0.0002444271,0.00044991737,0.00094044866,0.00032828367,0.0006548458,0.0049383016],"category_scores_gemma":[0.00038208097,0.0003048498,0.00037501418,0.00017613613,0.0003636979,0.0003477109,0.0005845875,0.00082243537,0.002248535],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015750313,0.000025201027,0.00019866144,0.00002065099,0.0000046587616,0.00015174733,0.000012990055,0.000068114845,0.9980652,0.00016779333,0.00008506588,0.0010424453],"study_design_scores_gemma":[0.000017484457,0.00006562555,0.0055913962,0.000007394057,0.000006303553,0.00034975685,0.000046169553,0.0009831693,0.9899974,0.00012118368,0.0028073764,0.000006820669],"about_ca_topic_score_codex":0.00024293225,"about_ca_topic_score_gemma":0.0003116674,"teacher_disagreement_score":0.0049383016,"about_ca_system_score_codex":0.0004531905,"about_ca_system_score_gemma":0.00025755982,"threshold_uncertainty_score":0.016520262},"labels":[],"label_agreement":null},{"id":"W3192132228","doi":"10.1084/jem.20201560","title":"Enhanced cGAS-STING–dependent interferon signaling associated with mutations in ATAD3A","year":2021,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":90,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Children's Hospital of Eastern Ontario; McGill University; McGill University Health Centre","funders":"MSDAVENIR; Vlaamse regering; European Research Council; Horizon 2020; Universitair Ziekenhuis Gent; Agence Nationale de la Recherche; Fonds Wetenschappelijk Onderzoek; Marie Curie; European Commission; Rosetrees Trust; Universiteit Gent; National Institute for Health and Care Research","keywords":"Sting; Interferon; Mutation; Cell biology; Chemistry; Biology; Virology; Genetics; Gene; Physics","score_opus":0.020192100332558666,"score_gpt":0.2905550028183426,"score_spread":0.270362902485784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3192132228","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99856937,0.00012902854,0.0007762057,0.000043911383,0.000005496364,0.000008133402,0.00010683383,0.00002311583,0.00033793467],"genre_scores_gemma":[0.99920756,0.00005542397,0.00048193266,0.000022123177,0.0000039809356,0.000004915406,0.00007382752,0.000003537727,0.000146746],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990034,0.000016537917,0.000016009772,0.000033092696,0.000018693238,0.000015370479],"domain_scores_gemma":[0.99985397,0.000040859053,0.000046226924,0.000013798251,0.000009988059,0.000035137084],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000095175645,0.00041895203,0.00020695655,0.0003828377,0.00031037163,0.00019819006,0.000116411946,0.00042385666,0.00094913394],"category_scores_gemma":[0.00022460795,0.0001142611,0.0003047074,0.00027201764,0.0003995352,0.00010331815,0.00021522772,0.00039887757,0.00015378512],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044818857,0.000048431466,0.034911662,0.00004612394,0.000022508166,0.016521778,0.00019406667,0.0001312252,0.9438629,0.00025658318,0.00009929174,0.0034571849],"study_design_scores_gemma":[0.00010828609,0.0009551845,0.27459353,0.000027976612,0.00010747548,0.24141885,0.00034767733,0.0022791782,0.47680458,0.0006373121,0.0026969106,0.0000231138],"about_ca_topic_score_codex":0.00035901152,"about_ca_topic_score_gemma":0.000555129,"teacher_disagreement_score":0.00094913394,"about_ca_system_score_codex":0.00028985145,"about_ca_system_score_gemma":0.00013623442,"threshold_uncertainty_score":0.003175199},"labels":[],"label_agreement":null},{"id":"W3194216207","doi":"10.1099/jgv.0.001638","title":"Viperin has species-specific roles in response to herpes simplex virus infection","year":2021,"lang":"en","type":"article","venue":"Journal of General Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Health and Medical Research Council; Australian Research Council; University of Alberta","keywords":"Biology; Herpes simplex virus; Virology; Viral replication; Downregulation and upregulation; Cell culture; Virus; Interferon; Gene; Cell biology; Genetics","score_opus":0.02752582102825544,"score_gpt":0.2686042794478374,"score_spread":0.24107845841958195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3194216207","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9805751,0.01309303,0.0019487899,0.00010211137,0.000049899358,0.000025354439,0.0003785715,0.00007416938,0.0037529424],"genre_scores_gemma":[0.99271786,0.0030991526,0.0013977544,0.00007606851,0.000022726621,0.000019911695,0.0003825795,0.00001731985,0.0022666254],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998692,0.000025039551,0.00001066537,0.000040442075,0.000021464659,0.000033152854],"domain_scores_gemma":[0.9998902,0.000019161871,0.000028576847,0.000009784164,0.000013017086,0.00003929343],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019107532,0.00023114076,0.00022903323,0.0002850936,0.00014314395,0.00034508703,0.00015012744,0.00021262892,0.0012104068],"category_scores_gemma":[0.00013395234,0.000102215796,0.00016169359,0.00015873063,0.00021441639,0.00021751497,0.00037636474,0.00037328622,0.00023454604],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013640824,0.000003906095,0.00036571414,0.00004299884,0.000003307986,0.0000718324,0.000019626466,0.000020379726,0.9980394,0.000070134294,0.000019542475,0.001206729],"study_design_scores_gemma":[0.000024134642,0.00063516793,0.111645944,0.000049801256,0.000045964374,0.002397674,0.00021002855,0.0004873949,0.8716388,0.00043315784,0.012418475,0.000013570402],"about_ca_topic_score_codex":0.00014135244,"about_ca_topic_score_gemma":0.00015078264,"teacher_disagreement_score":0.0012104068,"about_ca_system_score_codex":0.0002926613,"about_ca_system_score_gemma":0.00008785717,"threshold_uncertainty_score":0.0040492415},"labels":[],"label_agreement":null},{"id":"W3194773994","doi":"10.3390/ijms22169028","title":"Effects on Metabolism in Astrocytes Caused by cGAMP, Which Imitates the Initial Stage of Brain Metastasis","year":2021,"lang":"en","type":"article","venue":"International Journal of Molecular Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Toyo University; Mochida Memorial Foundation for Medical and Pharmaceutical Research; University of British Columbia","keywords":"Astrocyte; Glutamate receptor; Glutamine; Secretion; Biology; Central nervous system; Metastasis; Parenchyma; Neuroscience; Neuroglia; Cell biology; Cancer; Endocrinology; Biochemistry; Receptor; Amino acid","score_opus":0.015168718895474415,"score_gpt":0.30084192996985176,"score_spread":0.2856732110743774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3194773994","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939672,0.0016760337,0.0025419686,0.00010607457,0.000083131614,0.000057289446,0.00017934796,0.000045329576,0.0013436085],"genre_scores_gemma":[0.99357784,0.0010258238,0.003694549,0.000069881455,0.00001789947,0.000087781984,0.0002071787,0.000016911636,0.0013020015],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989665,0.000025819782,0.000009621391,0.00001998565,0.000020796617,0.000027185484],"domain_scores_gemma":[0.9999286,0.00001561644,0.000016682901,0.000011784727,0.000010618333,0.000016725227],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013384357,0.00028054297,0.00023082165,0.00012018334,0.00013334243,0.00019964954,0.00012990207,0.00033954837,0.0006882085],"category_scores_gemma":[0.00015349974,0.00009189824,0.0002122829,0.00011950761,0.00025119758,0.00020367114,0.00018083988,0.00053242006,0.0001699722],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002740027,0.00002813775,0.00007978839,0.000021908436,0.000002635068,0.000067630725,0.000012452838,0.000027026155,0.9989496,0.00003894046,0.000012459537,0.000485438],"study_design_scores_gemma":[0.00002220561,0.0006689631,0.0012659471,0.0000035387689,0.000010566908,0.00013739702,0.00002297624,0.00029156797,0.996768,0.000032099815,0.00077391224,0.0000029043902],"about_ca_topic_score_codex":0.0005230927,"about_ca_topic_score_gemma":0.00077502715,"teacher_disagreement_score":0.0006882085,"about_ca_system_score_codex":0.00014866331,"about_ca_system_score_gemma":0.00017910019,"threshold_uncertainty_score":0.0023022294},"labels":[],"label_agreement":null},{"id":"W3195210380","doi":"10.3390/v13081613","title":"Special Issue “APOBECs and Virus Restriction”","year":2021,"lang":"en","type":"editorial","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"APOBEC; Biology; Enzyme; Virus; Genetics; Immunity; Virology; Restriction enzyme; Apolipoprotein B; Computational biology; Genome; Biochemistry; Gene; Immune system","score_opus":0.012943742075359909,"score_gpt":0.27266147736012636,"score_spread":0.25971773528476644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3195210380","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000028551594,0.0024763972,0.00007325719,0.022190195,0.9736987,0.000019929508,0.00005179605,0.000051480187,0.0014096664],"genre_scores_gemma":[0.00024847328,0.002123052,0.00006270626,0.016544456,0.9730383,0.000021069129,0.000045162265,0.000026188814,0.007890533],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9966965,0.0007255661,0.0003470266,0.0005262012,0.0014171443,0.0002875599],"domain_scores_gemma":[0.99000084,0.003234081,0.0007983226,0.000284219,0.0033789717,0.0023035873],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0053913346,0.00409678,0.0033098622,0.0024919275,0.0030342846,0.0071826223,0.0033650962,0.011677684,0.022113923],"category_scores_gemma":[0.013931323,0.0011458681,0.0025138548,0.0010235021,0.0019079074,0.004133061,0.0017403151,0.01773095,0.017140651],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046838115,0.000011184398,0.000023002556,0.00011697504,0.00001038359,0.00008665077,0.0000059110334,0.000017802427,0.000056536144,0.00020234231,0.99617434,0.0032479758],"study_design_scores_gemma":[0.00009527874,0.000043652708,0.00025419224,0.00023808955,0.000042086584,0.00025994764,0.000027025186,0.0001466711,0.00012433376,0.0008482102,0.99790263,0.000017878596],"about_ca_topic_score_codex":0.0016253716,"about_ca_topic_score_gemma":0.00445012,"teacher_disagreement_score":0.022113923,"about_ca_system_score_codex":0.0029863834,"about_ca_system_score_gemma":0.0028485765,"threshold_uncertainty_score":0.073978424},"labels":[],"label_agreement":null},{"id":"W3195854721","doi":"10.3390/vaccines9080917","title":"The Promise and Challenges of Cyclic Dinucleotides as Molecular Adjuvants for Vaccine Development","year":2021,"lang":"en","type":"review","venue":"Vaccines","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Brock University","funders":"National Research Council Canada; Natural Sciences and Engineering Research Council of Canada; National Research Council","keywords":"Crosstalk; Innate immune system; Immune system; Stimulator of interferon genes; Signal transduction; Acquired immune system; Biology; Vaccine adjuvant; Computational biology; Immunology; Cell biology","score_opus":0.04687741968362245,"score_gpt":0.3186811369236125,"score_spread":0.27180371723999003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3195854721","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002518769,0.9978855,0.0002645552,0.00036437446,0.00023257089,0.0000033748206,0.000009510739,0.000006162112,0.0009820361],"genre_scores_gemma":[0.0011062768,0.9974927,0.0003575902,0.00019796137,0.0001993801,0.00000681364,0.000017014285,0.0000016502602,0.00062069885],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998652,0.000028610435,0.000013455327,0.000020916936,0.0000535158,0.000018272109],"domain_scores_gemma":[0.9998067,0.000095032716,0.000024838639,0.0000067535,0.000043501386,0.000023288945],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005102251,0.00056227937,0.00078549224,0.0011903702,0.0001931498,0.00078521686,0.0005638258,0.0010737757,0.002253636],"category_scores_gemma":[0.00045314964,0.00022747998,0.00030190943,0.000988969,0.00041126765,0.0014386723,0.000556634,0.0017815841,0.0013660607],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008154993,0.000094056035,0.00013806397,0.012394683,0.000047735066,0.00021574655,0.00007367393,0.00072551065,0.014111172,0.015591152,0.018136064,0.9383906],"study_design_scores_gemma":[0.000009231813,0.0001246812,0.00032701247,0.0014905048,0.000032762877,0.0005672402,0.000045613728,0.00016189834,0.0018494407,0.0038720288,0.9915052,0.000014325564],"about_ca_topic_score_codex":0.00042712074,"about_ca_topic_score_gemma":0.0007621304,"teacher_disagreement_score":0.002253636,"about_ca_system_score_codex":0.00043763864,"about_ca_system_score_gemma":0.0006907834,"threshold_uncertainty_score":0.0075390935},"labels":[],"label_agreement":null},{"id":"W3196190359","doi":"10.1371/journal.ppat.1009800","title":"SARS-CoV-2 suppresses IFNβ production mediated by NSP1, 5, 6, 15, ORF6 and ORF7b but does not suppress the effects of added interferon","year":2021,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":145,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Novo Nordisk Fonden; Israel Science Foundation; University of California, San Francisco; University of Melbourne; Monash University; McGill University; National Health and Medical Research Council; State Government of Victoria; Johns Hopkins University","keywords":"Interferon γ; Interferon; Production (economics); Coronavirus disease 2019 (COVID-19); Virology; Interferon gamma; Chemistry; Biology; Medicine; Immunology; Cytokine; Internal medicine; Economics; Microeconomics","score_opus":0.011585894764129804,"score_gpt":0.2291548102666051,"score_spread":0.2175689155024753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3196190359","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961359,0.000827326,0.0014532256,0.00006487891,0.000033932753,0.000030483103,0.00042498688,0.000053400418,0.0009757933],"genre_scores_gemma":[0.98934746,0.00077029766,0.003440419,0.00009239195,0.00002081103,0.00005844418,0.0025545708,0.00004087235,0.0036747372],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997644,0.000040986124,0.000027212598,0.000041621086,0.00007326201,0.000052517426],"domain_scores_gemma":[0.99984264,0.000027971337,0.00004752674,0.000024960495,0.000023068707,0.000033675773],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019466867,0.00046677957,0.0003292704,0.0001795338,0.00010260241,0.00027356748,0.00014481432,0.00022603963,0.0012812683],"category_scores_gemma":[0.00011744575,0.00013525652,0.0004252641,0.00009261469,0.00025684453,0.00015501503,0.0001537709,0.0006639624,0.0005201773],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053902662,0.000020759402,0.00005943651,0.000015893622,0.0000016678125,0.000009174938,0.000004095889,0.000018664397,0.9995685,0.000012902928,0.0000086536575,0.0002263959],"study_design_scores_gemma":[0.000007912686,0.00033442347,0.0016602104,0.00000422841,0.0000062503887,0.00010020135,0.000014668333,0.00032165713,0.9966215,0.000010489555,0.0009166577,0.0000017726194],"about_ca_topic_score_codex":0.00024012878,"about_ca_topic_score_gemma":0.00036233247,"teacher_disagreement_score":0.0012812683,"about_ca_system_score_codex":0.0001612108,"about_ca_system_score_gemma":0.00022252709,"threshold_uncertainty_score":0.0042862296},"labels":[],"label_agreement":null},{"id":"W3196791738","doi":"10.18192/uojm.v11is1.5929","title":"Revising the model for vaccine development: a step towards tuberculosis immunity","year":2021,"lang":"en","type":"article","venue":"University of Ottawa Journal of Medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"University of Ottawa","funders":"","keywords":"Tuberculosis; Pandemic; Medicine; Tuberculosis vaccines; Disease; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty); Immunology; Immunity; Clinical trial; Virology; Intensive care medicine; Mycobacterium tuberculosis; Immune system; Pathology","score_opus":0.020870066277895685,"score_gpt":0.24505802124656376,"score_spread":0.22418795496866806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3196791738","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0108766975,0.13483398,0.1115006,0.66948146,0.017991638,0.0002510348,0.0004425109,0.00065061706,0.053971544],"genre_scores_gemma":[0.39466053,0.22538637,0.12714815,0.20101587,0.019198466,0.0012625533,0.0006984181,0.0005946978,0.030034998],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99439275,0.0027367987,0.00021201247,0.00069401157,0.001361421,0.0006029179],"domain_scores_gemma":[0.99165314,0.0049225306,0.00050951756,0.00077153306,0.0010449315,0.0010983787],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0118078785,0.0014505341,0.002265558,0.0012625536,0.0019936878,0.0076593477,0.002947366,0.008044416,0.00853041],"category_scores_gemma":[0.009055756,0.00076505204,0.0011775133,0.00069990987,0.016053284,0.015247634,0.0042212545,0.02223444,0.00393397],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004197513,0.00031309293,0.0011389249,0.0016181011,0.00013867562,0.00048763477,0.0013148603,0.003058969,0.007063472,0.8702782,0.051661424,0.062506914],"study_design_scores_gemma":[0.00011090881,0.00046863384,0.000394055,0.00075900235,0.000058610334,0.00028520447,0.00059492054,0.0026633502,0.001985466,0.6972441,0.29536736,0.00006845997],"about_ca_topic_score_codex":0.0018812779,"about_ca_topic_score_gemma":0.0019379201,"teacher_disagreement_score":0.0118078785,"about_ca_system_score_codex":0.0055230646,"about_ca_system_score_gemma":0.008422613,"threshold_uncertainty_score":0.062446773},"labels":[],"label_agreement":null},{"id":"W3199235790","doi":"10.1101/2021.09.10.457789","title":"Induction of transposable element expression is central to innate sensing","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Labex Immuno-Oncology; Institut Universitaire de France; Ligue Contre le Cancer; Fondation pour la Recherche Médicale; Institut National Du Cancer; Institut National de la Santé et de la Recherche Médicale; Agence Nationale de la Recherche; Université de Paris; Association pour la Recherche sur le Cancer; Seerave Foundation; Institut Gustave-Roussy; Fondation Leducq; European Commission; Centre National de la Recherche Scientifique; Equipex; Danish Cancer Society Research Center","keywords":"Innate immune system; Biology; Cell biology; Transposable element; Histone; Epigenetics; TLR3; Endogeny; DNA; Genome; Immune system; Genetics; Gene; Toll-like receptor","score_opus":0.013425586487477202,"score_gpt":0.2232170932258479,"score_spread":0.2097915067383707,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3199235790","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.961069,0.004898848,0.0197759,0.0008330436,0.00026721242,0.000040843315,0.0010575503,0.0006925129,0.011365184],"genre_scores_gemma":[0.984144,0.0013909439,0.0039912257,0.00011634807,0.000068998874,0.000019928093,0.0007443159,0.000048729384,0.009475518],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986076,0.00001607834,0.0000086608525,0.00004308643,0.000044152093,0.000027232694],"domain_scores_gemma":[0.9999169,0.0000100612615,0.000022348255,0.000018538682,0.000011777691,0.0000204431],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013214187,0.00022298246,0.00017187823,0.00013953612,0.00013237644,0.00035846228,0.00013626716,0.00026492702,0.002803928],"category_scores_gemma":[0.00012917994,0.000100452824,0.00018325541,0.00009666351,0.00026488738,0.00017744879,0.0002605844,0.0004844617,0.0011866608],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036488997,0.0000060563284,0.00033555186,0.00002852434,0.0000026822354,0.0000487022,0.000010107333,0.000030434914,0.99713683,0.0004672162,0.00008309686,0.0018142634],"study_design_scores_gemma":[0.000010921312,0.00011381528,0.0076346593,0.000011981452,0.000009976663,0.0004041578,0.00003817799,0.00094793213,0.9803729,0.00089297455,0.009558025,0.000004479944],"about_ca_topic_score_codex":0.00016010554,"about_ca_topic_score_gemma":0.0001567982,"teacher_disagreement_score":0.002803928,"about_ca_system_score_codex":0.00026172452,"about_ca_system_score_gemma":0.00019472995,"threshold_uncertainty_score":0.009380043},"labels":[],"label_agreement":null},{"id":"W3200711728","doi":"10.1016/j.resinv.2021.08.007","title":"Increased LHX9 expression in alveolar epithelial type 2 cells of patients with chronic obstructive pulmonary disease","year":2021,"lang":"en","type":"article","venue":"Respiratory Investigation","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Aging","funders":"Japan Society for the Promotion of Science; MSD Life Science Foundation, Public Interest Incorporated Foundation","keywords":"COPD; A549 cell; Medicine; Lung; Tumor necrosis factor alpha; Internal medicine; Immunology; Cancer research; Endocrinology","score_opus":0.010410371823976316,"score_gpt":0.21661034327829773,"score_spread":0.20619997145432142,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3200711728","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998828,0.00037776772,0.00011589312,0.000040310784,0.0000075966773,0.0000043770865,0.00016898265,0.000004879706,0.00045206043],"genre_scores_gemma":[0.9992793,0.000097770164,0.00006820603,0.000038292274,0.0000161307,0.00000611727,0.00018828893,0.0000015750744,0.0003043219],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998292,0.000033617624,0.000019805138,0.000040915747,0.000035306846,0.000041232684],"domain_scores_gemma":[0.9997627,0.00006890994,0.00006694775,0.000012095828,0.000041470135,0.000047836827],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000121884725,0.00015058291,0.000298144,0.00053392485,0.0003340734,0.00054333394,0.00012677777,0.0004329052,0.0018919817],"category_scores_gemma":[0.00047434418,0.00009111795,0.00014735348,0.00035378698,0.00018679824,0.00019505978,0.00019470803,0.0002654504,0.00023683209],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00081018027,0.000052138857,0.9302651,0.00006593258,0.000044817414,0.0019475189,0.00034979032,0.000035882767,0.060433783,0.000046206173,0.00022711638,0.0057215276],"study_design_scores_gemma":[0.000009015045,0.0001129373,0.9937546,0.000009806601,0.000029657205,0.0019739084,0.0005459263,0.00014222445,0.0028951252,0.0000387066,0.0004845882,0.0000034883446],"about_ca_topic_score_codex":0.000856848,"about_ca_topic_score_gemma":0.000976858,"teacher_disagreement_score":0.0018919817,"about_ca_system_score_codex":0.00014465257,"about_ca_system_score_gemma":0.00010938126,"threshold_uncertainty_score":0.006329298},"labels":[],"label_agreement":null},{"id":"W3201311681","doi":"10.1101/2021.09.17.460379","title":"Discovery of frog virus 3 microRNAs and their roles in evasion of host antiviral responses","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada; University of Waterloo","keywords":"Ranavirus; Biology; microRNA; Host (biology); Virus; Xenopus; Gene; Amphibian; Gene ontology; Virology; Cell biology; Gene expression; Genetics; Ecology","score_opus":0.011499564197742012,"score_gpt":0.2201616199615579,"score_spread":0.20866205576381588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3201311681","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97686553,0.005465434,0.009574281,0.00023744609,0.00012119408,0.0000473112,0.0025054254,0.0002604085,0.0049228864],"genre_scores_gemma":[0.97360104,0.0016544971,0.014306408,0.00018537753,0.000040438288,0.00004444828,0.0033324754,0.00006688871,0.0067683756],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998727,0.000014959639,0.0000074251684,0.000042270774,0.000038899943,0.00002384819],"domain_scores_gemma":[0.999915,0.00001882285,0.00002906135,0.000007686155,0.000011399207,0.000017979914],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001942363,0.00023410055,0.00023274163,0.00026382375,0.0002262628,0.00038604392,0.00008880231,0.00030661587,0.0013657653],"category_scores_gemma":[0.00015531169,0.00012712786,0.0003821225,0.00018733798,0.00017075306,0.00020720651,0.00019541479,0.00045261884,0.0005867819],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013356128,0.000006949208,0.0010861075,0.000035171342,0.0000045763472,0.00007426973,0.00001579455,0.0000469129,0.9963595,0.00014272529,0.0000840675,0.00201036],"study_design_scores_gemma":[0.000011952412,0.00019690087,0.028476186,0.000014721613,0.000015587202,0.0007280537,0.000062100116,0.0010265406,0.9612323,0.00026535435,0.007960562,0.00000975694],"about_ca_topic_score_codex":0.000311466,"about_ca_topic_score_gemma":0.00046245937,"teacher_disagreement_score":0.0013657653,"about_ca_system_score_codex":0.00027550888,"about_ca_system_score_gemma":0.00017717,"threshold_uncertainty_score":0.004568875},"labels":[],"label_agreement":null},{"id":"W3202981271","doi":"10.1101/2021.09.29.462206","title":"Genome graphs detect human polymorphisms in active epigenomic state during influenza infection","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill Genome Centre; Ontario Genomics; McGill University","funders":"Canadian Institutes of Health Research; Compute Canada; Genome Canada; McGill University","keywords":"Epigenomics; Biology; Epigenome; Genome; Epigenetics; Genetics; Computational biology; Chromatin; Gene; Evolutionary biology; DNA methylation; Gene expression","score_opus":0.012555974454685044,"score_gpt":0.2291401547072234,"score_spread":0.21658418025253837,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202981271","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97565764,0.00028034093,0.014827829,0.000103169834,0.000018595478,0.000014784802,0.007844165,0.0004352187,0.0008182498],"genre_scores_gemma":[0.9799818,0.000106173495,0.010657132,0.000041070467,0.000013165399,0.000019157917,0.008724178,0.0000856793,0.00037163266],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99985445,0.000033115834,0.000007102382,0.000061889055,0.000024897812,0.000018409024],"domain_scores_gemma":[0.9991841,0.0004406502,0.00016713228,0.00008508462,0.0000721891,0.000050871844],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018489278,0.00016420988,0.00016570395,0.00086245406,0.00016061304,0.00034071927,0.00017033727,0.00025703633,0.0017946024],"category_scores_gemma":[0.0013142339,0.00012274338,0.0002173862,0.00085404236,0.0001401761,0.00023563224,0.00024536575,0.0001863492,0.0002379241],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002212685,0.0001580739,0.51158136,0.0005518059,0.00069355406,0.00052295293,0.0006473812,0.028126469,0.3423516,0.0052745254,0.007916437,0.09996322],"study_design_scores_gemma":[0.000047632162,0.00024420032,0.8571437,0.000037784568,0.00017449012,0.00075484044,0.0004559909,0.08742287,0.034965955,0.010209158,0.008485588,0.000057817364],"about_ca_topic_score_codex":0.00146798,"about_ca_topic_score_gemma":0.0020739243,"teacher_disagreement_score":0.0017946024,"about_ca_system_score_codex":0.00018648893,"about_ca_system_score_gemma":0.00010509833,"threshold_uncertainty_score":0.0060035586},"labels":[],"label_agreement":null},{"id":"W3203249973","doi":"10.1126/science.abj3624","title":"A prenylated dsRNA sensor protects against severe COVID-19","year":2021,"lang":"en","type":"article","venue":"Science","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":248,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Biotechnology and Biological Sciences Research Council; Medical Research Council; National Institute for Health and Care Research; Wellcome Trust","keywords":"Prenylation; Biology; Coronavirus; Single-nucleotide polymorphism; Interferon; Virology; Gene; Disease; Coronavirus disease 2019 (COVID-19); Genetics; Genotype; Infectious disease (medical specialty); Medicine; Enzyme; Biochemistry","score_opus":0.02101898132110182,"score_gpt":0.28573024293653365,"score_spread":0.26471126161543185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3203249973","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99854374,0.00032588185,0.0004978228,0.00006283565,0.000020479043,0.000011488141,0.00011849158,0.000040449944,0.000378819],"genre_scores_gemma":[0.99871886,0.00008416906,0.00043517238,0.00005431213,0.0000058108612,0.000008020382,0.00023318836,0.000006040917,0.00045442823],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998969,0.00001872836,0.000011390132,0.000027231574,0.000016605863,0.000029177376],"domain_scores_gemma":[0.9998902,0.000016691029,0.000034761888,0.000011929212,0.000010142059,0.000036270365],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001149872,0.00025002268,0.00036693274,0.00012534874,0.0000974344,0.00021941424,0.00011133106,0.0003288544,0.0016606649],"category_scores_gemma":[0.00015290358,0.0001082962,0.0001994627,0.000058922913,0.00017069593,0.0001457754,0.00014865793,0.00045407863,0.0003487999],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042359772,0.000041205087,0.00040071114,0.000015849477,0.000005569624,0.00002549261,0.000006232843,0.000020432944,0.99808097,0.000026344456,0.0000243005,0.0009293102],"study_design_scores_gemma":[0.00011770558,0.0031920995,0.019426981,0.0000109113735,0.00003383913,0.00072228914,0.000058086454,0.00093413773,0.974077,0.000111105335,0.0013065141,0.00000936059],"about_ca_topic_score_codex":0.00011518012,"about_ca_topic_score_gemma":0.00018617196,"teacher_disagreement_score":0.0016606649,"about_ca_system_score_codex":0.00017094579,"about_ca_system_score_gemma":0.00012781254,"threshold_uncertainty_score":0.0055555105},"labels":[],"label_agreement":null},{"id":"W3205668829","doi":"10.1038/s41598-021-99182-3","title":"Transcriptomics of chicken cecal tonsils and intestine after infection with low pathogenic avian influenza virus H9N2","year":2021,"lang":"en","type":"article","venue":"Scientific Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University of Guelph","funders":"Ontario Veterinary College, University of Guelph; Agriculture and Agri-Food Canada; University of Guelph; Chicken Farmers of Saskatchewan; Canada First Research Excellence Fund; Natural Sciences and Engineering Research Council of Canada; Canadian Poultry Research Council","keywords":"Biology; Transcriptome; Influenza A virus subtype H5N1; Virology; Microbiology; Interferon; Virus; Ileum; Gene; Heat shock protein; Gene expression; Genetics","score_opus":0.008005273121678104,"score_gpt":0.22784116777949492,"score_spread":0.21983589465781683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3205668829","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99331963,0.0015550078,0.0013204091,0.00004547917,0.000026007601,0.000021279484,0.0026332347,0.000022295264,0.0010565419],"genre_scores_gemma":[0.9876297,0.001437758,0.0023804028,0.00011411711,0.000015089303,0.00009146336,0.0048617907,0.000021989925,0.003447662],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999442,0.000005154322,0.0000028626848,0.000021693926,0.000012684474,0.000013439269],"domain_scores_gemma":[0.99995327,0.000007882563,0.000011413894,0.000002615881,0.000013577245,0.000011187387],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007180478,0.00018703063,0.00021087119,0.00029458897,0.00020161245,0.00028333985,0.00006827439,0.00018887992,0.0006050481],"category_scores_gemma":[0.000071661954,0.00010685129,0.00021911653,0.00019605905,0.00015404283,0.00015454246,0.00014569923,0.00026671885,0.00022214784],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028230317,0.000010323316,0.0047818753,0.00009300125,0.000012810674,0.00008658862,0.00008593764,0.000063742096,0.99276155,0.000022602191,0.000075664,0.0017236501],"study_design_scores_gemma":[0.000013267862,0.00043699096,0.79604,0.000051188494,0.0000873552,0.000569657,0.0009989773,0.0023119226,0.19511048,0.00012417643,0.004231584,0.000024514222],"about_ca_topic_score_codex":0.0012974401,"about_ca_topic_score_gemma":0.0023679447,"teacher_disagreement_score":0.0012974401,"about_ca_system_score_codex":0.00016009333,"about_ca_system_score_gemma":0.00013668412,"threshold_uncertainty_score":0.0025797486},"labels":[],"label_agreement":null},{"id":"W3207736600","doi":"10.1016/j.jtho.2021.08.708","title":"P69.03 Chemotherapy Upregulates PD-L1 Expression and Activates cGAS-STING Pathway in Non-Small Cell Lung Cancer Models","year":2021,"lang":"en","type":"article","venue":"Journal of Thoracic Oncology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Medicine; Chemotherapy; Cancer research; Lung cancer; Cisplatin; Sting; Immunotherapy; Pembrolizumab; Cell; Cell culture; Cancer; Oncology; Internal medicine; Biology","score_opus":0.016573425018827772,"score_gpt":0.3344446957343933,"score_spread":0.31787127071556553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3207736600","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9879381,0.0015125421,0.001727584,0.000515455,0.00034935604,0.00017368606,0.0017044147,0.00034366074,0.0057352087],"genre_scores_gemma":[0.99299616,0.0007793665,0.00074821827,0.00014379111,0.000035442612,0.00016838402,0.0011627215,0.00001952016,0.003946463],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997303,0.000031826108,0.00001590637,0.000032234326,0.000069143425,0.00012064269],"domain_scores_gemma":[0.9999187,0.000008762174,0.00002062864,0.000009799983,0.000008856096,0.00003325145],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014588024,0.00046512083,0.00041522237,0.00042679536,0.00034557428,0.00043194494,0.00028001762,0.00043729396,0.0039890143],"category_scores_gemma":[0.00010963439,0.00014797668,0.00049140956,0.00035890596,0.0003010081,0.0002864245,0.00016947553,0.0016615902,0.00076066336],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0072829295,0.004887432,0.0018348979,0.00034079904,0.00007738138,0.0006323546,0.00009939908,0.0012767337,0.9513155,0.0010333972,0.006075962,0.025143232],"study_design_scores_gemma":[0.0010361726,0.019791987,0.0137407305,0.000041946343,0.00017952346,0.0009086357,0.00021373534,0.007013004,0.94170886,0.0005387088,0.014789332,0.00003735064],"about_ca_topic_score_codex":0.0013763215,"about_ca_topic_score_gemma":0.0029634207,"teacher_disagreement_score":0.0039890143,"about_ca_system_score_codex":0.00039415344,"about_ca_system_score_gemma":0.0007199267,"threshold_uncertainty_score":0.013344586},"labels":[],"label_agreement":null},{"id":"W3207771083","doi":"10.4049/jimmunol.2100627","title":"Zebrafish <i>prmt2</i> Attenuates Antiviral Innate Immunity by Targeting traf6","year":2021,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Innate immune system; Zebrafish; Immunity; Biology; Intrinsic immunity; Virology; Immunology; Immune system; Genetics; Gene","score_opus":0.008423158085990576,"score_gpt":0.2302567763783643,"score_spread":0.22183361829237375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3207771083","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904109,0.0012909798,0.003987937,0.00040422092,0.000101196754,0.00003739145,0.00078550196,0.00040617157,0.002575756],"genre_scores_gemma":[0.9895538,0.00037129165,0.0020517614,0.00016502227,0.000017241218,0.000046093315,0.0005295062,0.000059227397,0.007206073],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998192,0.000016667145,0.000014364991,0.000047015543,0.000054934775,0.00004775889],"domain_scores_gemma":[0.9998965,0.000007072939,0.000040515562,0.000009618059,0.0000122430365,0.000034026245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000116960495,0.0004894872,0.00030359853,0.00023190433,0.00020281054,0.0002671533,0.00030312073,0.0005235321,0.0022755598],"category_scores_gemma":[0.00010931672,0.00016083325,0.00036424823,0.0000835138,0.0004085538,0.00027777342,0.00020507492,0.00086038484,0.0005020677],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000083358755,0.000009216881,0.00006888142,0.000022401005,0.0000032263895,0.000026929318,0.0000038262433,0.000028962859,0.9993356,0.00005139621,0.000050364113,0.0003158351],"study_design_scores_gemma":[0.000030657196,0.00031171102,0.0026085097,0.0000046755845,0.00001811516,0.00020414218,0.000020662077,0.0006975875,0.9932602,0.000033752774,0.0028036782,0.0000063119764],"about_ca_topic_score_codex":0.0024399757,"about_ca_topic_score_gemma":0.0030269886,"teacher_disagreement_score":0.0024399757,"about_ca_system_score_codex":0.00060025,"about_ca_system_score_gemma":0.00035797528,"threshold_uncertainty_score":0.007612467},"labels":[],"label_agreement":null},{"id":"W3208249698","doi":"10.4049/jimmunol.2001282","title":"HIF-1α Regulation of Cytokine Production following TLR3 Engagement in Murine Bone Marrow–Derived Macrophages Is Dependent on Viral Nucleic Acid Length and Glucose Availability","year":2021,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Children's Hospital of Eastern Ontario; Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Proinflammatory cytokine; TLR3; Cytokine; Biology; Cell biology; TLR4; Immune system; Innate immune system; Inflammation; Immunology; Signal transduction; Toll-like receptor","score_opus":0.012570505047009529,"score_gpt":0.24136047744795916,"score_spread":0.22878997240094964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3208249698","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99407345,0.0016381753,0.0028676295,0.000112088375,0.00003473906,0.000027305721,0.00042235322,0.000029691033,0.0007945995],"genre_scores_gemma":[0.99617636,0.0007254828,0.0014339349,0.000109341585,0.000018090921,0.000049560687,0.0004299428,0.00001401605,0.0010433785],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983203,0.000026885893,0.000014952027,0.000034873523,0.00003167328,0.000059559432],"domain_scores_gemma":[0.9998715,0.000013695004,0.000051154606,0.000010188741,0.000018672654,0.000034706813],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022578266,0.00024044792,0.00019220477,0.00015533759,0.00012069026,0.00024917955,0.0001103899,0.00022305113,0.0009583873],"category_scores_gemma":[0.00009522231,0.00010103259,0.00021751746,0.00012038119,0.00023786242,0.00017845277,0.0002069096,0.0005005689,0.00032431277],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025210326,0.000013821649,0.00018092422,0.000016285509,0.0000015548954,0.00001853095,0.000009213114,0.000015914113,0.9990501,0.000020367492,0.000010355788,0.00041084024],"study_design_scores_gemma":[0.00003269311,0.00035560247,0.012581279,0.0000114823715,0.000012782933,0.000119385426,0.000048838698,0.00046262203,0.9853843,0.000079517675,0.0009067972,0.000004795758],"about_ca_topic_score_codex":0.00017736861,"about_ca_topic_score_gemma":0.00032033556,"teacher_disagreement_score":0.0009583873,"about_ca_system_score_codex":0.00017526964,"about_ca_system_score_gemma":0.00013874048,"threshold_uncertainty_score":0.0032061338},"labels":[],"label_agreement":null},{"id":"W3208567322","doi":"10.1038/s41467-021-26653-6","title":"Competitive binding of E3 ligases TRIM26 and WWP2 controls SOX2 in glioblastoma","year":2021,"lang":"en","type":"article","venue":"Nature Communications","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Center for Cellular Imaging, Washington University; National Cancer Institute; U.S. Department of Health and Human Services; National Institutes of Health; National Institute of Neurological Disorders and Stroke; Alvin J. Siteman Cancer Center; Foundation for Barnes-Jewish Hospital; University of Toronto","keywords":"Glioblastoma; SOX2; Computational biology; Biology; Computer science; World Wide Web; Bioinformatics; Cancer research; Genetics; Transcription factor; Gene","score_opus":0.012660038443497034,"score_gpt":0.28757408311793403,"score_spread":0.274914044674437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3208567322","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975702,0.0006906675,0.00095469406,0.000048685233,0.000008418069,0.0000039498705,0.0001215708,0.00003705618,0.0005647203],"genre_scores_gemma":[0.99819845,0.00015663642,0.00045738238,0.00002610286,0.0000024835404,0.0000052624205,0.0001379892,0.0000110575265,0.0010046136],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998035,0.000030341087,0.000014377566,0.0000451053,0.000046745838,0.000059912698],"domain_scores_gemma":[0.9998832,0.000009678927,0.000032292704,0.000010368912,0.0000144934065,0.000049910042],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017762856,0.0001904745,0.00023626619,0.00020704577,0.00020730394,0.00033985003,0.00018534287,0.0002189411,0.0011783061],"category_scores_gemma":[0.00016268552,0.00016361238,0.0001888866,0.00013196419,0.0001988099,0.00017823307,0.00028184027,0.00031009773,0.00046313304],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001492348,0.000010156862,0.00078305375,0.000013774052,0.000004229579,0.000047232246,0.000008152189,0.00008531686,0.99814236,0.00008393897,0.000046854668,0.00062572176],"study_design_scores_gemma":[0.00001786892,0.00011552528,0.028906647,0.0000039766296,0.0000132828545,0.0003234942,0.0000675343,0.0037622284,0.9652906,0.00011999378,0.0013730761,0.0000058073997],"about_ca_topic_score_codex":0.0009016585,"about_ca_topic_score_gemma":0.0018587922,"teacher_disagreement_score":0.0011783061,"about_ca_system_score_codex":0.00053565897,"about_ca_system_score_gemma":0.00022577253,"threshold_uncertainty_score":0.0039417744},"labels":[],"label_agreement":null},{"id":"W3209043685","doi":"10.1093/ajcp/aqab191.288","title":"Comparison of longitudinal SARS-CoV-2 nasopharyngeal specimens reveals the transcriptomic COVIDome","year":2021,"lang":"en","type":"article","venue":"American Journal of Clinical Pathology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Centre for Disease Control; University of Calgary","funders":"","keywords":"Transcriptome; Population; Viral load; Real-time polymerase chain reaction; Immunology; Gene expression; Medicine; Pathogenesis; Pathology; Gene; Biology; Internal medicine; Bioinformatics; Virus; Genetics","score_opus":0.09717825480441179,"score_gpt":0.4306245242409372,"score_spread":0.33344626943652544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3209043685","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99752516,0.00026000448,0.0008358361,0.000022231612,0.000010406558,0.000027058488,0.0007977597,0.000014471794,0.00050688215],"genre_scores_gemma":[0.99662256,0.00016374646,0.0011537886,0.000040365343,0.000011138836,0.000037289283,0.0014110223,0.000008022559,0.0005520691],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99977213,0.00002910329,0.000020868645,0.00008129313,0.00005021352,0.0000464801],"domain_scores_gemma":[0.99976784,0.000046345653,0.000059882346,0.00004121824,0.000050627405,0.0000341676],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002939042,0.0001500028,0.00018678718,0.00040629084,0.000282477,0.00043702938,0.00010175299,0.00020596519,0.0014311151],"category_scores_gemma":[0.00043737903,0.00010609328,0.0001977791,0.00030994788,0.00025446698,0.0001403184,0.00029344612,0.00023664316,0.00040751795],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009650536,0.000080726655,0.3503785,0.00009475799,0.00007815055,0.00090551,0.00038807504,0.00014786773,0.638564,0.000098631426,0.00021314794,0.008085499],"study_design_scores_gemma":[0.000008262312,0.00049292925,0.93085164,0.0000124071985,0.000056739675,0.0026850384,0.00075547094,0.00040495663,0.062743746,0.000061561084,0.0019195525,0.00000768845],"about_ca_topic_score_codex":0.00063934585,"about_ca_topic_score_gemma":0.0011515318,"teacher_disagreement_score":0.0014311151,"about_ca_system_score_codex":0.00015778822,"about_ca_system_score_gemma":0.00013394533,"threshold_uncertainty_score":0.0047875047},"labels":[],"label_agreement":null},{"id":"W3209266150","doi":"10.1038/s41467-021-26240-9","title":"A non-canonical, interferon-independent signaling activity of cGAMP triggers DNA damage response signaling","year":2021,"lang":"en","type":"article","venue":"Nature Communications","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Eye Institute; Université de Montréal; University of Virginia; Pennsylvania State University; National Institutes of Health; U.S. Department of Health and Human Services; Ohio State University; University of Pennsylvania; BrightFocus Foundation; John Templeton Foundation; National Cancer Institute; Ohio Lions Eye Research Foundation; Owens Family Foundation; American Heart Association; National Science Foundation; Yale University","keywords":"Stimulator of interferon genes; Signal transduction; Cell biology; Biology; Phosphorylation; DNA damage; Interferon; IRF3; DNA; Biochemistry; Innate immune system; Receptor; Genetics","score_opus":0.022495902395876902,"score_gpt":0.30482941361492066,"score_spread":0.28233351121904376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3209266150","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9882117,0.0025710084,0.0034445177,0.00019951117,0.00006617009,0.000033854896,0.00064914423,0.00011370253,0.004710314],"genre_scores_gemma":[0.9960979,0.00044636405,0.001315288,0.00006192424,0.00001531168,0.000025443609,0.000335544,0.0000075580165,0.0016947587],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987304,0.00001682943,0.000007725183,0.000034170807,0.000030642495,0.00003758011],"domain_scores_gemma":[0.999887,0.000016095748,0.000025681175,0.000019267063,0.000012598348,0.00003935728],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000080423444,0.00029987554,0.00015720764,0.000116291565,0.00012234667,0.00024440634,0.00014324716,0.0002605926,0.0018013942],"category_scores_gemma":[0.00011036286,0.0000772337,0.00020480136,0.00007789673,0.00021286825,0.00020842452,0.00030319675,0.0004434217,0.00039676728],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007038578,0.0000060341667,0.00013806229,0.000029478058,0.0000017580015,0.000052840893,0.0000030816777,0.000016388385,0.9990415,0.00009522015,0.000024510593,0.00052071153],"study_design_scores_gemma":[0.000013629059,0.00014166284,0.0064385626,0.00000902717,0.000008043246,0.00036662235,0.000018794222,0.00056985684,0.9902582,0.00010512329,0.0020680707,0.0000025185125],"about_ca_topic_score_codex":0.00025571176,"about_ca_topic_score_gemma":0.00049304473,"teacher_disagreement_score":0.0018013942,"about_ca_system_score_codex":0.00033424195,"about_ca_system_score_gemma":0.00017670116,"threshold_uncertainty_score":0.006026268},"labels":[],"label_agreement":null},{"id":"W3209536410","doi":"10.1007/s00018-021-04001-7","title":"The crosstalk between viral RNA- and DNA-sensing mechanisms","year":2021,"lang":"en","type":"review","venue":"Cellular and Molecular Life Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":48,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Natural Science Foundation of China","keywords":"Innate immune system; Interferon; Biology; RNA; Stimulator of interferon genes; Crosstalk; Nucleic acid; Virology; Interferon type I; DNA; RNA virus; Virus; Proinflammatory cytokine; Immunity; Pattern recognition receptor; Immune system; Immunology; Gene; Inflammation; Genetics","score_opus":0.02956786179205888,"score_gpt":0.2961901437182942,"score_spread":0.2666222819262353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3209536410","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006193673,0.998257,0.00016369324,0.000331932,0.00041193745,0.0000020097855,0.000008385318,0.00000429244,0.00075889105],"genre_scores_gemma":[0.00056848035,0.99763477,0.00016894327,0.00030117453,0.00069453736,0.000004978843,0.000022346869,0.0000010594788,0.0006036807],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997788,0.00004067117,0.000024401572,0.000049818336,0.00007690501,0.00002941357],"domain_scores_gemma":[0.99963033,0.00019531662,0.000045626773,0.000013007275,0.00007051161,0.00004512295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000894239,0.0012969638,0.0015326805,0.0014834943,0.0002721497,0.0016437693,0.0012467804,0.001839727,0.00244018],"category_scores_gemma":[0.0006699229,0.00031642456,0.00031832443,0.0019259388,0.0010322807,0.0022056228,0.0010716853,0.0025036444,0.0017160159],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001324197,0.000060052444,0.00017775092,0.010056734,0.000054698503,0.00025414192,0.00005811414,0.0005455267,0.0053110346,0.014323693,0.03826915,0.9307566],"study_design_scores_gemma":[0.00001666852,0.00006452871,0.00057789724,0.0021733884,0.000052747266,0.00088421145,0.000069310976,0.00015462768,0.00078611,0.007306327,0.9878935,0.000020541442],"about_ca_topic_score_codex":0.00059647375,"about_ca_topic_score_gemma":0.001030407,"teacher_disagreement_score":0.00244018,"about_ca_system_score_codex":0.00096156646,"about_ca_system_score_gemma":0.001060004,"threshold_uncertainty_score":0.008163214},"labels":[],"label_agreement":null},{"id":"W3211125697","doi":"10.1093/jmcb/mjab071","title":"The crosstalk between the caspase family and the cGAS‒STING signaling pathway","year":2021,"lang":"en","type":"review","venue":"Journal of Molecular Cell Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Innate immune system; Crosstalk; Signal transduction; Stimulator of interferon genes; Biology; Signal transducing adaptor protein; Cell biology; Sting; Caspase; Caspase 1; Inflammasome; Programmed cell death; Immunology; Inflammation; Apoptosis; Immune system; Genetics","score_opus":0.02605503305107001,"score_gpt":0.28927399139303167,"score_spread":0.2632189583419617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3211125697","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00025543824,0.99114066,0.0005292965,0.0007687666,0.0024267503,0.000012723237,0.000035953188,0.0000288819,0.0048014866],"genre_scores_gemma":[0.0014953815,0.98900783,0.00061567355,0.00038799725,0.001393543,0.000016734672,0.0000832496,0.0000068061745,0.006992742],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99988806,0.0000149562175,0.000015631795,0.00002624192,0.000042870004,0.000012172696],"domain_scores_gemma":[0.9998872,0.00003094547,0.000016414559,0.0000044510657,0.000040119463,0.000020763408],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030987963,0.0009091578,0.0008441029,0.0012605032,0.00027499162,0.00082833524,0.0005306734,0.0006802538,0.0048765074],"category_scores_gemma":[0.0003072157,0.00026810402,0.00031443554,0.0013601435,0.00032234122,0.0011678917,0.00069779495,0.0019668008,0.0041283634],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008007344,0.000041420186,0.00008017561,0.0056672543,0.00003731575,0.00019936751,0.000061725965,0.00037821077,0.005126609,0.0050794254,0.07616892,0.9070795],"study_design_scores_gemma":[0.000009236071,0.000043484866,0.00030747484,0.0006674971,0.000018848827,0.0005705263,0.000015970423,0.000088852044,0.0007390492,0.0010548548,0.9964748,0.000009522015],"about_ca_topic_score_codex":0.0005958002,"about_ca_topic_score_gemma":0.00064161327,"teacher_disagreement_score":0.0048765074,"about_ca_system_score_codex":0.0005334065,"about_ca_system_score_gemma":0.00081792613,"threshold_uncertainty_score":0.016313493},"labels":[],"label_agreement":null},{"id":"W3211606478","doi":"10.2139/ssrn.3959283","title":"Genetic Association and Mendelian Randomization for Hypothyroidism Highlight Immune Molecular Mechanisms","year":2021,"lang":"en","type":"article","venue":"SSRN Electronic Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Mendelian randomization; Mendelian inheritance; Genetic association; Association (psychology); Genome-wide association study; Genetics; Biology; Immune system; Computational biology; Evolutionary biology; Medicine; Bioinformatics; Psychology; Single-nucleotide polymorphism; Gene; Genetic variants; Genotype","score_opus":0.0033996364308883625,"score_gpt":0.2042337427133971,"score_spread":0.20083410628250872,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3211606478","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97223705,0.0013033643,0.020724691,0.0010601816,0.00013149898,0.00003431639,0.0005925375,0.00029413743,0.0036222662],"genre_scores_gemma":[0.9950877,0.00017887831,0.0035243994,0.00012214179,0.000096159165,0.000014739302,0.0001256508,0.00004656828,0.0008037826],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99655676,0.0014719164,0.0002055359,0.0009627694,0.00055002916,0.00025298036],"domain_scores_gemma":[0.9949591,0.0031785653,0.0007782559,0.00072408107,0.00013166667,0.000228275],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023113615,0.0008565644,0.00077321916,0.0019515584,0.0003962345,0.0006887547,0.00095433975,0.0010304541,0.008515412],"category_scores_gemma":[0.004986626,0.00034603663,0.0009951896,0.0011258922,0.0009474832,0.0005298268,0.0006257247,0.0007194781,0.0004181861],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013097233,0.00037669952,0.54654264,0.00036073182,0.0036833934,0.017486818,0.0009048505,0.0029057483,0.30453405,0.037499323,0.0023252259,0.07028323],"study_design_scores_gemma":[0.0008294831,0.0010142378,0.8824029,0.00009758211,0.0020450929,0.024740791,0.00035615405,0.018519014,0.02446468,0.041317787,0.0040542358,0.00015801197],"about_ca_topic_score_codex":0.0010312849,"about_ca_topic_score_gemma":0.00094733294,"teacher_disagreement_score":0.008515412,"about_ca_system_score_codex":0.0003217824,"about_ca_system_score_gemma":0.00033353243,"threshold_uncertainty_score":0.028486907},"labels":[],"label_agreement":null},{"id":"W3211906514","doi":"10.3390/jcm10215196","title":"IRF3 Knockout Results in Partial or Complete Rejection of Murine Mesothelioma","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; Toronto General Hospital; University of Toronto; University Health Network","funders":"Princess Margaret Hospital Foundation; Brown University","keywords":"Medicine; Mesothelioma; Knockout mouse; Cancer research; Immunology; Pathology; Internal medicine; Receptor","score_opus":0.11787420934844056,"score_gpt":0.42399690670714446,"score_spread":0.3061226973587039,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3211906514","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904377,0.0009726586,0.0029083341,0.00022257169,0.00008673222,0.00005409565,0.0034476935,0.00043366608,0.001436587],"genre_scores_gemma":[0.99241734,0.00041103727,0.0016965946,0.00010896327,0.000013266901,0.00007563849,0.0018728931,0.000095036914,0.003309212],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99959093,0.00003969626,0.000050365932,0.00009413078,0.00010115183,0.00012371699],"domain_scores_gemma":[0.9995123,0.000040182098,0.00017358328,0.00006344578,0.000024597963,0.00018590665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025150526,0.00057804596,0.00033503154,0.000584128,0.0002875208,0.00037169343,0.00029758314,0.0006704818,0.0034093491],"category_scores_gemma":[0.00018555931,0.0003306797,0.0008242819,0.00020168106,0.00045929803,0.00030644346,0.00033159807,0.0012700973,0.0010937805],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037939815,0.000057973586,0.0005113942,0.0000619544,0.000017777658,0.00015199943,0.000025343845,0.00012418035,0.997393,0.00012073254,0.00016785073,0.0009882462],"study_design_scores_gemma":[0.0000976134,0.0010149152,0.019594256,0.000041401312,0.00008008788,0.001413286,0.00016718845,0.0021114075,0.96977824,0.00019127787,0.0054901363,0.000020138861],"about_ca_topic_score_codex":0.0005907352,"about_ca_topic_score_gemma":0.0008795836,"teacher_disagreement_score":0.0034093491,"about_ca_system_score_codex":0.00035245827,"about_ca_system_score_gemma":0.0002675731,"threshold_uncertainty_score":0.011405408},"labels":[],"label_agreement":null},{"id":"W3212315301","doi":"10.1101/2021.11.04.467016","title":"Repeats Mimic Pathogen-Associated Patterns Across a Vast Evolutionary Landscape","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Princess Margaret Cancer Centre; University Health Network","funders":"Canadian Institutes of Health Research; National Cancer Institute; Pershing Square Sohn Cancer Research Alliance; National Institutes of Health; Agence Nationale de la Recherche; Natural Sciences and Engineering Research Council of Canada; Edward P. Evans Foundation; V Foundation for Cancer Research","keywords":"Biology; Innate immune system; Genome; Mimicry; Genetics; Molecular mimicry; MDA5; Computational biology; Evolutionary biology; RNA; Gene; RNA interference; Immune system; Ecology","score_opus":0.01194121849081247,"score_gpt":0.2264573921503767,"score_spread":0.2145161736595642,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3212315301","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9776829,0.00011603107,0.020841086,0.00006553018,0.0000038757257,0.0000095085015,0.000100392484,0.00007901223,0.0011017093],"genre_scores_gemma":[0.99562126,0.0000532947,0.0040465975,0.000022457421,0.0000022322163,0.0000072712196,0.00007281376,0.000011747757,0.00016231698],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998684,0.000029704399,0.0000069915936,0.000046563375,0.000030015904,0.000018267026],"domain_scores_gemma":[0.99963737,0.00012695738,0.00013010982,0.000040763025,0.000036031204,0.000028731345],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003413336,0.00022126803,0.00020975005,0.00051738735,0.000321504,0.0005937755,0.00031735023,0.0005430039,0.0010564735],"category_scores_gemma":[0.000989132,0.00017917398,0.00028713673,0.00033206027,0.0005042256,0.00079557707,0.00042021656,0.0004394341,0.00027162165],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023025669,0.00010388017,0.14996234,0.0002016039,0.00020400622,0.000509211,0.00029983654,0.25290704,0.5527305,0.017112877,0.0003299813,0.025408499],"study_design_scores_gemma":[0.00001606072,0.00042141453,0.07738649,0.000025536388,0.000081972765,0.00081186835,0.0003793476,0.8518766,0.045073345,0.021814495,0.0020516464,0.00006126901],"about_ca_topic_score_codex":0.0009722738,"about_ca_topic_score_gemma":0.001013514,"teacher_disagreement_score":0.0010564735,"about_ca_system_score_codex":0.00047302395,"about_ca_system_score_gemma":0.00017065898,"threshold_uncertainty_score":0.0035341978},"labels":[],"label_agreement":null},{"id":"W3212463154","doi":"10.1101/2021.11.09.467981","title":"Fibroblast-expressed LRRC15 suppresses SARS-CoV-2 infection and controls antiviral and antifibrotic transcriptional programs","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Fibroblast; Receptor; Context (archaeology); Virology; Messenger RNA; Cell culture; Cell biology; Gene; Genetics","score_opus":0.01730681692624752,"score_gpt":0.22956179148341843,"score_spread":0.2122549745571709,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3212463154","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97997975,0.0015896652,0.00845359,0.00020689797,0.000090419875,0.000039943563,0.0021330994,0.00040138603,0.007105224],"genre_scores_gemma":[0.98037064,0.00045784502,0.005772734,0.00009568979,0.000018712268,0.000032402215,0.0027575707,0.0001346022,0.010359878],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998369,0.000025144294,0.000012841959,0.00003404376,0.000054139266,0.00003691956],"domain_scores_gemma":[0.99992836,0.000012862022,0.00001774876,0.000014911615,0.00000931333,0.00001685055],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015137023,0.00032324105,0.00023608674,0.00019186274,0.00014172075,0.00029446936,0.00015192549,0.0002485114,0.0024141094],"category_scores_gemma":[0.00008234696,0.00008968199,0.0002006767,0.00010593588,0.00017966084,0.0000949915,0.0002244947,0.00037773672,0.0012252236],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004345091,0.000008324938,0.00008467169,0.000010754967,0.0000015587844,0.000027200636,0.0000047229764,0.000028346536,0.99923146,0.00005384817,0.00005288341,0.00045286535],"study_design_scores_gemma":[0.000007262277,0.000049540176,0.0016360162,0.000002410918,0.0000028080692,0.00012921302,0.000013340808,0.00055266306,0.99471444,0.000026595153,0.0028638141,0.000001949111],"about_ca_topic_score_codex":0.00046816494,"about_ca_topic_score_gemma":0.0007142788,"teacher_disagreement_score":0.0024141094,"about_ca_system_score_codex":0.00022190038,"about_ca_system_score_gemma":0.00014494707,"threshold_uncertainty_score":0.008076012},"labels":[],"label_agreement":null},{"id":"W3212903297","doi":"10.3389/fmicb.2021.778950","title":"NLRP3 Inflammasome Activation Enhanced by TRIM25 is Targeted by the NS1 Protein of 2009 Pandemic Influenza A Virus","year":2021,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Foundation for Innovation; Innovation Saskatchewan","keywords":"Inflammasome; Influenza A virus; Biology; Signal transducing adaptor protein; Cell biology; Innate immune system; Ubiquitin ligase; Pyrin domain; Virus; Virology; Phosphorylation; Ubiquitin; Immunology; Genetics; Inflammation; Immune system; Gene","score_opus":0.007494357869598864,"score_gpt":0.23119353604991585,"score_spread":0.22369917818031698,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3212903297","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974228,0.000879164,0.00063649734,0.00005247278,0.00002278528,0.00001458205,0.00017890317,0.000024758248,0.00076798565],"genre_scores_gemma":[0.99797565,0.000267622,0.00062539114,0.000053738913,0.0000068472236,0.000017099515,0.00036587633,0.0000054251714,0.0006823051],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999007,0.000020869498,0.0000114383765,0.00001845961,0.000018165812,0.000030366939],"domain_scores_gemma":[0.99993837,0.0000092590135,0.000017843078,0.0000072782473,0.000005934981,0.00002124367],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012439037,0.00027064298,0.00020676326,0.00016352582,0.0001488409,0.0001596642,0.00014701986,0.0002966897,0.001052549],"category_scores_gemma":[0.000113389644,0.00011161413,0.0003204406,0.00008562742,0.0001643344,0.00014405203,0.00016419656,0.0004008743,0.00031303783],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017285417,0.0000128667325,0.00015982526,0.000027707485,0.0000044920303,0.00009608937,0.0000089164705,0.00004105987,0.99907625,0.00003418176,0.000029309962,0.0003363934],"study_design_scores_gemma":[0.00003891624,0.0003803021,0.01825466,0.000009897201,0.000024379931,0.00079342694,0.00006316404,0.0016992033,0.97724473,0.000098266864,0.0013843961,0.000008693812],"about_ca_topic_score_codex":0.00048655955,"about_ca_topic_score_gemma":0.0005223707,"teacher_disagreement_score":0.001052549,"about_ca_system_score_codex":0.00028082664,"about_ca_system_score_gemma":0.00012139952,"threshold_uncertainty_score":0.0035211444},"labels":[],"label_agreement":null},{"id":"W3214785065","doi":"10.1101/2021.11.22.21266712","title":"Human phospho-signaling networks of SARS-CoV-2 infection are rewired by population genetic variants","year":2021,"lang":"en","type":"preprint","venue":"medRxiv","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Government of Ontario; Ontario Institute for Cancer Research","keywords":"Biology; Phosphorylation; Signal transduction; Genetic variation; Sequence motif; RNA splicing; Innate immune system; Genetics; Population; Immune system; Computational biology; RNA; Gene","score_opus":0.028596005121283997,"score_gpt":0.28163200327906823,"score_spread":0.2530359981577842,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3214785065","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99883634,0.00009191484,0.0005016466,0.000016725498,0.0000025321467,0.0000015256002,0.00027350461,0.0000082627,0.0002675171],"genre_scores_gemma":[0.9991941,0.000040437088,0.00023881752,0.000009437681,0.0000024858207,0.000002344788,0.00030998912,0.0000039992724,0.00019844546],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991333,0.000016304899,0.000005424623,0.000034140197,0.000013877726,0.000016900316],"domain_scores_gemma":[0.99990976,0.000018609582,0.00003902021,0.00001036632,0.0000071780405,0.00001517875],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011728135,0.00012240396,0.00014594285,0.00021440453,0.000091572736,0.00017795779,0.000062875886,0.0001346951,0.001420767],"category_scores_gemma":[0.00019958691,0.000058659632,0.0001577601,0.00023314651,0.00012642152,0.00007523185,0.00010546889,0.00016297042,0.00018472556],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008985853,0.000045616696,0.10431283,0.00003106946,0.000100888305,0.00029232423,0.00006835819,0.0016829494,0.88341784,0.00059932657,0.00022870273,0.008321449],"study_design_scores_gemma":[0.000024145262,0.00026709234,0.909441,0.000006965264,0.00006804275,0.0013554435,0.00011505633,0.008811993,0.07739709,0.0009539506,0.0015425714,0.00001663106],"about_ca_topic_score_codex":0.0007450634,"about_ca_topic_score_gemma":0.00079947355,"teacher_disagreement_score":0.001420767,"about_ca_system_score_codex":0.00016306587,"about_ca_system_score_gemma":0.000096475196,"threshold_uncertainty_score":0.004752934},"labels":[],"label_agreement":null},{"id":"W3214849626","doi":"10.1161/res.129.suppl_1.mp233","title":"Abstract MP233: Investigating Genotoxic-induced Innate Immune Pathways Leading To Heart Failure With Preserved Ejection Fraction For Developing Effective Treatments","year":2021,"lang":"en","type":"article","venue":"Circulation Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Ottawa Heart Institute; University of Ottawa; Montreal Heart Institute","funders":"","keywords":"Inflammation; Senescence; Heart failure; DNA damage; Fibrosis; Downregulation and upregulation; Innate immune system; Population; Cardiac fibrosis; Biology; Ejection fraction; Heart failure with preserved ejection fraction; Systemic inflammation; Medicine; Immunology; Immune system; Pathology; Cell biology; Internal medicine; DNA; Genetics","score_opus":0.09948731619419789,"score_gpt":0.36401555725040974,"score_spread":0.26452824105621187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3214849626","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9013661,0.061764773,0.02322846,0.0027533637,0.0006062674,0.0007032872,0.002509577,0.00035637798,0.006711779],"genre_scores_gemma":[0.9437289,0.026345516,0.015549317,0.0009974757,0.0003443167,0.00055490516,0.0025648044,0.000035629928,0.009879079],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999063,0.000016641723,0.000007828957,0.00001812048,0.000030216253,0.00002095491],"domain_scores_gemma":[0.99991834,0.000007679219,0.000023757386,0.000006385195,0.000020971058,0.000022869119],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003261238,0.0005459293,0.00036116684,0.0003748142,0.00015253152,0.0002582237,0.0003288049,0.0005067953,0.003535283],"category_scores_gemma":[0.00009989631,0.00008390942,0.00033872892,0.00015170705,0.00022167432,0.00027801294,0.0002785643,0.00075267145,0.0005654371],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043553291,0.00015134421,0.0005852185,0.00064756663,0.000027149794,0.00010009702,0.000018388384,0.00014243407,0.982139,0.00033833671,0.00046471925,0.0149501925],"study_design_scores_gemma":[0.0002390098,0.009709237,0.018802328,0.00026245086,0.00028052897,0.0013528835,0.000100065656,0.001097258,0.9364242,0.0007762558,0.030929672,0.000026055932],"about_ca_topic_score_codex":0.00016401146,"about_ca_topic_score_gemma":0.00033312375,"teacher_disagreement_score":0.003535283,"about_ca_system_score_codex":0.00023209192,"about_ca_system_score_gemma":0.00038320723,"threshold_uncertainty_score":0.011826634},"labels":[],"label_agreement":null},{"id":"W3216793955","doi":"10.1007/s00251-021-01235-4","title":"Recurrent expansions of B30.2-associated immune receptor families in fish","year":2021,"lang":"en","type":"article","venue":"Immunogenetics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Biology; Innate immune system; Genome; Gene; Copy-number variation; Gene duplication; Gene family; Genetics; Computational biology; Zebrafish; Immune system; Receptor; Immunity; Acquired immune system","score_opus":0.013697268570617272,"score_gpt":0.24917632774960594,"score_spread":0.23547905917898868,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3216793955","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99904865,0.000070840244,0.00019123526,0.00001771408,0.0000020153252,0.000003547143,0.000114660055,0.0000073848905,0.0005439882],"genre_scores_gemma":[0.9986998,0.00005703757,0.00022131776,0.0000322384,0.0000046594164,0.0000078644725,0.0001674371,0.000007770054,0.0008019065],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999833,0.000016021584,0.000014451826,0.00004821389,0.00004368179,0.000044737983],"domain_scores_gemma":[0.99976236,0.000045345787,0.00010257142,0.000022664146,0.000026501495,0.000040607636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017391538,0.0001900404,0.00023800216,0.0008276122,0.00027794854,0.00019571389,0.00022457264,0.0003636088,0.002007844],"category_scores_gemma":[0.00031212592,0.00015649485,0.00036602473,0.00044848447,0.00036659426,0.00015613086,0.0003755465,0.0003367585,0.00043033654],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005359601,0.00003052115,0.06073891,0.000035567464,0.00005481995,0.0013531519,0.00031473412,0.00028216647,0.92936546,0.00022698003,0.00012541737,0.0069362484],"study_design_scores_gemma":[0.000030229286,0.0003832009,0.95166564,0.000013906353,0.0000869211,0.0068219462,0.0004733071,0.0009626571,0.036459733,0.00023481503,0.002843912,0.000023706001],"about_ca_topic_score_codex":0.0033672159,"about_ca_topic_score_gemma":0.0041069794,"teacher_disagreement_score":0.0033672159,"about_ca_system_score_codex":0.0004861382,"about_ca_system_score_gemma":0.00024023047,"threshold_uncertainty_score":0.006716907},"labels":[],"label_agreement":null},{"id":"W4200043954","doi":"10.1186/s12985-021-01724-8","title":"IRF2 inhibits ZIKV replication by promoting FAM111A expression to enhance the host restriction effect of RFC3","year":2021,"lang":"en","type":"article","venue":"Virology Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; Toronto Rehabilitation Institute","funders":"National Key Research and Development Program of China; Department of Science and Technology of Sichuan Province; Chinese Academy of Medical Sciences Initiative for Innovative Medicine; National Natural Science Foundation of China","keywords":"Biology; Viral replication; Virology; Replication (statistics); Virus","score_opus":0.00477188496919583,"score_gpt":0.2721440673933958,"score_spread":0.26737218242419997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200043954","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9844727,0.0039747017,0.0065207663,0.00028341604,0.000102447266,0.00005046939,0.0008868266,0.00022290408,0.0034859353],"genre_scores_gemma":[0.993554,0.00060052826,0.002765651,0.000101744314,0.00001744091,0.00003436231,0.0007817418,0.000028102513,0.0021164587],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999816,0.000018847282,0.000013662805,0.000047848775,0.00004969449,0.00005398109],"domain_scores_gemma":[0.99990654,0.00002088766,0.000020560023,0.00001604166,0.000018009723,0.000018017041],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017271297,0.000345179,0.00027066204,0.00016941222,0.00020850163,0.00027240667,0.0001861111,0.0003832054,0.0028069816],"category_scores_gemma":[0.00014098482,0.00011899611,0.00046829192,0.000115105795,0.00023663843,0.00022501608,0.00015967211,0.0007876134,0.00054998405],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052463503,0.000010384748,0.00016501047,0.00003321136,0.0000027258318,0.000014158899,0.0000046471114,0.000021918651,0.9990656,0.000042665382,0.000038477458,0.00054869003],"study_design_scores_gemma":[0.000013659911,0.00011071363,0.0035049173,0.0000053251306,0.000011842578,0.00011124992,0.000014942877,0.0006718209,0.9936847,0.000030227327,0.0018373657,0.0000032502953],"about_ca_topic_score_codex":0.0005912241,"about_ca_topic_score_gemma":0.00061851885,"teacher_disagreement_score":0.0028069816,"about_ca_system_score_codex":0.0003920466,"about_ca_system_score_gemma":0.00021165315,"threshold_uncertainty_score":0.009390295},"labels":[],"label_agreement":null},{"id":"W4200142188","doi":"10.3390/ijms222413232","title":"How the Innate Immune DNA Sensing cGAS–STING Pathway Is Involved in Autophagy","year":2021,"lang":"en","type":"review","venue":"International Journal of Molecular Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Autophagy; Innate immune system; Sting; Cell biology; Stimulator of interferon genes; Biology; ULK1; PI3K/AKT/mTOR pathway; Signal transduction; Immune system; Immunology; Apoptosis; Genetics; Phosphorylation; Protein kinase A","score_opus":0.043779687591283714,"score_gpt":0.3173876928189407,"score_spread":0.273608005227657,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200142188","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00026716027,0.9977684,0.0001967712,0.00020491958,0.00023916413,0.000004618511,0.000016912847,0.000009756328,0.0012923081],"genre_scores_gemma":[0.0011205204,0.99758255,0.00020695575,0.0001415783,0.00014081509,0.0000064234387,0.00003354173,0.0000014946647,0.00076615164],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999336,0.000008600877,0.000011271953,0.000014431753,0.000023152998,0.000008912776],"domain_scores_gemma":[0.9999398,0.000018471743,0.000011119545,0.00000236117,0.000018683122,0.000009551455],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019838479,0.00060505123,0.0007482572,0.0013967062,0.0001948934,0.00063634495,0.0004257965,0.0006397637,0.0017498329],"category_scores_gemma":[0.00020111479,0.00021100191,0.0003464953,0.0011931197,0.00023429749,0.0010058552,0.00041942633,0.0011098196,0.0012108306],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000100959136,0.000052810265,0.00017912142,0.017180052,0.00008040955,0.00036819512,0.00007655833,0.00046219485,0.00899097,0.0048114066,0.028968848,0.93872845],"study_design_scores_gemma":[0.000016304932,0.00009714097,0.00134535,0.0022256188,0.00009393978,0.002211125,0.00004850075,0.00014928375,0.0019718644,0.002018718,0.98980343,0.000018690274],"about_ca_topic_score_codex":0.00051497994,"about_ca_topic_score_gemma":0.0008216665,"teacher_disagreement_score":0.0017498329,"about_ca_system_score_codex":0.000466277,"about_ca_system_score_gemma":0.0006817858,"threshold_uncertainty_score":0.005853832},"labels":[],"label_agreement":null},{"id":"W4200270895","doi":"10.1002/jmv.27554","title":"The emerging roles of the CDK/cyclin complexes in antiviral innate immunity","year":2021,"lang":"en","type":"review","venue":"Journal of Medical Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Cyclin-dependent kinase; Biology; Cell biology; Innate immune system; Cyclin; Kinase; Cell cycle; Immunology; Cell; Immune system; Biochemistry","score_opus":0.03139824767050171,"score_gpt":0.3526693790047237,"score_spread":0.321271131334222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200270895","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00010992936,0.99811685,0.0001252369,0.00034585068,0.00037781356,0.0000023769232,0.0000119714205,0.000008747769,0.00090129726],"genre_scores_gemma":[0.0006080665,0.9979826,0.00020775752,0.0002058598,0.0003207728,0.000003967885,0.000027357264,0.0000017738846,0.0006419226],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999869,0.000020864974,0.000018066157,0.000021437812,0.00005171307,0.000018845227],"domain_scores_gemma":[0.9998049,0.00007217521,0.000023893945,0.000006709373,0.00005945323,0.000032928394],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044585866,0.00056678656,0.0008048256,0.0012999733,0.0002344783,0.0008717543,0.00057821104,0.00083601504,0.00333626],"category_scores_gemma":[0.00051157625,0.00021080907,0.0003210179,0.0013816277,0.00031890944,0.001347882,0.00059640245,0.0016465458,0.0021680312],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006663192,0.000034061766,0.00015768007,0.011129897,0.00005583235,0.00019957547,0.00006641274,0.0002681221,0.0032685394,0.0051297722,0.041813094,0.9378104],"study_design_scores_gemma":[0.000006404635,0.000038402864,0.00047560452,0.0011609979,0.000040297473,0.0006725013,0.000034265315,0.000051816503,0.00042553057,0.0018448588,0.9952401,0.000009219464],"about_ca_topic_score_codex":0.00044347372,"about_ca_topic_score_gemma":0.0007962761,"teacher_disagreement_score":0.00333626,"about_ca_system_score_codex":0.0005634704,"about_ca_system_score_gemma":0.00088123576,"threshold_uncertainty_score":0.0111608505},"labels":[],"label_agreement":null},{"id":"W4200420906","doi":"10.1016/j.bioorg.2021.105549","title":"Design, synthesis and biological evaluation studies of novel small molecule ENPP1 inhibitors for cancer immunotherapy","year":2021,"lang":"en","type":"article","venue":"Bioorganic Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"PROTEO; Université Laval","funders":"","keywords":"Stimulator of interferon genes; Cancer immunotherapy; Phosphodiesterase; Chemistry; Immunotherapy; Interferon; In vitro; In vivo; Biochemistry; Cancer cell; ADME; Enzyme; Pharmacology; Cancer; Cancer research; Immune system; Biology; Cytosol; Immunology","score_opus":0.09969920453891744,"score_gpt":0.3198654506192957,"score_spread":0.22016624608037827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200420906","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92950386,0.02757773,0.030900331,0.0006847596,0.00017629648,0.00088593643,0.0009355783,0.00016852145,0.009167033],"genre_scores_gemma":[0.9596791,0.017392239,0.013493795,0.00029357857,0.00004389102,0.00031485752,0.001079205,0.000033810946,0.0076695327],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998735,0.00002733843,0.000007653901,0.000018740466,0.00003227638,0.000040462615],"domain_scores_gemma":[0.9999354,0.000011638515,0.000017476914,0.0000047489216,0.000014138559,0.000016513042],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004918501,0.0005197035,0.0003816061,0.00022642378,0.0002159523,0.00040363122,0.00041478776,0.00026699592,0.0014497587],"category_scores_gemma":[0.00023919444,0.00019274543,0.0002951636,0.00019241747,0.00018255295,0.0003059049,0.00020725158,0.0006291434,0.00033639785],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064250786,0.00055915426,0.000246809,0.00036989065,0.000049862618,0.0002462018,0.00007922462,0.0059910403,0.9622242,0.0017076962,0.0006392304,0.027244242],"study_design_scores_gemma":[0.00027796265,0.0034126353,0.0006201709,0.000031460353,0.000084082734,0.00036905668,0.000030756175,0.0038960844,0.97426707,0.00024112208,0.016749319,0.000020356953],"about_ca_topic_score_codex":0.0005337984,"about_ca_topic_score_gemma":0.0010173024,"teacher_disagreement_score":0.0014497587,"about_ca_system_score_codex":0.00051384233,"about_ca_system_score_gemma":0.00040763762,"threshold_uncertainty_score":0.0048499703},"labels":[],"label_agreement":null},{"id":"W4200573585","doi":"10.1007/s00018-021-04072-6","title":"DExD/H-box helicases: multifunctional regulators in antiviral innate immunity","year":2021,"lang":"en","type":"review","venue":"Cellular and Molecular Life Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":59,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Biology; Innate immune system; RIG-I; Helicase; Pattern recognition receptor; Signal transduction; Cell biology; Interferon; Receptor; Immunology; RNA; Genetics; Gene","score_opus":0.029940995485487263,"score_gpt":0.29991274948767843,"score_spread":0.26997175400219114,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200573585","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007563695,0.9978521,0.00024564072,0.00034528752,0.00047141188,0.0000035540656,0.000023215878,0.000011400766,0.0009716961],"genre_scores_gemma":[0.00061105314,0.9969227,0.00028697035,0.00028618515,0.00070406415,0.000006940051,0.00006678777,0.000002062372,0.0011133057],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99982953,0.000022169186,0.000020009824,0.000031344498,0.000072429226,0.000024426417],"domain_scores_gemma":[0.99970835,0.000106776526,0.000044591718,0.0000105242725,0.00006935231,0.000060442704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072642486,0.0012741413,0.0013425044,0.0014929454,0.00023276627,0.0013963504,0.0010492462,0.001276257,0.0034403363],"category_scores_gemma":[0.00063348364,0.00028666653,0.00028839684,0.0020167967,0.000716641,0.001636356,0.000870156,0.002204855,0.0038243039],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012341193,0.000045139823,0.000091734626,0.0055156327,0.00003712566,0.00013300702,0.000026964888,0.000278592,0.0038967566,0.0034195958,0.053479005,0.93295294],"study_design_scores_gemma":[0.00002042789,0.000046479054,0.0003360881,0.0007730815,0.000035549325,0.0004851656,0.00002589032,0.00007046624,0.0006159782,0.0017796967,0.99579877,0.0000123831605],"about_ca_topic_score_codex":0.0004027109,"about_ca_topic_score_gemma":0.00081863103,"teacher_disagreement_score":0.0034403363,"about_ca_system_score_codex":0.0006982826,"about_ca_system_score_gemma":0.00088783074,"threshold_uncertainty_score":0.01150912},"labels":[],"label_agreement":null},{"id":"W4205231558","doi":"10.1007/s00251-021-01238-1","title":"Evolution of RNA sensing receptors in birds","year":2022,"lang":"en","type":"review","venue":"Immunogenetics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Human genetics; RNA; Evolutionary biology; Receptor; Computational biology; Genetics; Gene","score_opus":0.03712819023590298,"score_gpt":0.30140689139460647,"score_spread":0.2642787011587035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205231558","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00011336698,0.99805117,0.00012360762,0.0002962691,0.0004740134,0.0000015260039,0.00001308117,0.000004137445,0.0009228553],"genre_scores_gemma":[0.0007529521,0.99618727,0.00014913805,0.00029947108,0.0010860226,0.0000022111471,0.000044363016,0.000002065465,0.0014764331],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998703,0.000016682485,0.000016828102,0.00004108596,0.000037267968,0.00001785509],"domain_scores_gemma":[0.9997427,0.00011139455,0.000046184945,0.000010166485,0.00005064545,0.000038833212],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005428603,0.0009876649,0.0011434724,0.0012939847,0.00023624077,0.0012594884,0.001100363,0.0014180939,0.0030898007],"category_scores_gemma":[0.00053875794,0.0003337697,0.00025378083,0.0016395756,0.00095733086,0.0014553942,0.00082093943,0.0016501892,0.001869591],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009425921,0.00002956424,0.00027806973,0.006709173,0.00005496754,0.00019545271,0.000047037483,0.0006900875,0.0036960484,0.005204612,0.042410053,0.9405907],"study_design_scores_gemma":[0.000008531282,0.00004000136,0.0011450717,0.0012572699,0.000045794128,0.00057805044,0.000044098786,0.00009911579,0.0003624124,0.002240141,0.9941666,0.000012875429],"about_ca_topic_score_codex":0.0017235243,"about_ca_topic_score_gemma":0.0026557345,"teacher_disagreement_score":0.0030898007,"about_ca_system_score_codex":0.0009564853,"about_ca_system_score_gemma":0.0006930769,"threshold_uncertainty_score":0.010336459},"labels":[],"label_agreement":null},{"id":"W4205272273","doi":"10.1101/2022.01.13.476191","title":"cGAS recruitment to micronuclei is dictated by pre-existing nuclear chromatin status","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; Princess Margaret Cancer Centre; University Health Network; University of Toronto","funders":"Canadian Institutes of Health Research; Genentech; European Federation of Pharmaceutical Industries and Associations; University of Toronto; Ontario Genomics Institute; Merck KGaA; Ontario Genomics; Genome Canada; McGill University; Bayer; Princess Margaret Cancer Foundation; Pfizer; Bristol-Myers Squibb","keywords":"Chromatin; Cell biology; Micronucleus test; Histone; Cytosol; Biology; DNA damage; Epigenetics; Transcription (linguistics); Chemistry; DNA; Genetics; Biochemistry; Gene; Enzyme","score_opus":0.025925419597909092,"score_gpt":0.26158203338339636,"score_spread":0.23565661378548727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205272273","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99438727,0.0012104362,0.002580175,0.00008572528,0.00002376794,0.000010899224,0.0003248861,0.000071369985,0.0013054403],"genre_scores_gemma":[0.99628097,0.00027421862,0.0010191941,0.000034715013,0.0000066717625,0.00001274048,0.0004579023,0.000019546593,0.0018940864],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984694,0.000018237184,0.000013120665,0.000049573475,0.000036852107,0.000035271565],"domain_scores_gemma":[0.9998629,0.000022411887,0.00004015918,0.000023890978,0.000014102012,0.00003655886],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018155498,0.00015482359,0.0002138476,0.00011537677,0.00013504208,0.00038112092,0.00011991204,0.00023035976,0.0016282572],"category_scores_gemma":[0.00015840797,0.000115697825,0.00013365787,0.00007864565,0.00024776784,0.00016026408,0.00028614225,0.00045113277,0.0006326827],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049557482,0.0000024116218,0.00026427794,0.000013770478,0.0000011955871,0.000012909152,0.0000072916887,0.000013663054,0.9992718,0.000042479372,0.000013700594,0.000306877],"study_design_scores_gemma":[0.0000061426663,0.00006878552,0.011936688,0.000004841006,0.0000031846646,0.00014895367,0.000028294931,0.00033341744,0.98578185,0.000046370747,0.0016385881,0.0000028914358],"about_ca_topic_score_codex":0.0003637976,"about_ca_topic_score_gemma":0.0005529154,"teacher_disagreement_score":0.0016282572,"about_ca_system_score_codex":0.00032256256,"about_ca_system_score_gemma":0.00017536024,"threshold_uncertainty_score":0.00544703},"labels":[],"label_agreement":null},{"id":"W4205380847","doi":"10.3389/fimmu.2021.797880","title":"Function and Molecular Mechanism of the DNA Damage Response in Immunity and Cancer Immunotherapy","year":2021,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Cancer Institute; University of Texas MD Anderson Cancer Center; National Natural Science Foundation of China; National Institutes of Health; Cancer Prevention and Research Institute of Texas","keywords":"DNA damage; Immune system; Innate immune system; Immunotherapy; Cancer immunotherapy; Context (archaeology); Acquired immune system; Immune checkpoint","score_opus":0.005922504245505665,"score_gpt":0.22244070837303412,"score_spread":0.21651820412752845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205380847","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.035357017,0.8937967,0.02513755,0.019430041,0.0026169932,0.00011714496,0.00014463377,0.00019532104,0.023204708],"genre_scores_gemma":[0.45725554,0.48015526,0.014561637,0.009233233,0.005113356,0.0003543457,0.0003545475,0.000057330744,0.032914706],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99962294,0.00010834826,0.000023813805,0.00008431326,0.00007631399,0.00008426149],"domain_scores_gemma":[0.99982184,0.00003363636,0.000036567402,0.000019787494,0.000045923134,0.00004230468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00094098103,0.0005807337,0.0007074336,0.0007031973,0.00045344952,0.0016148739,0.0008720165,0.0017742814,0.0022135621],"category_scores_gemma":[0.0003448818,0.00022406402,0.0004545951,0.00040632667,0.0015005528,0.0018459221,0.00076202146,0.0020964344,0.0011058332],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00071985763,0.00054021383,0.0020726868,0.0034577805,0.00011156787,0.0011753915,0.0005546718,0.00282657,0.2744907,0.3583057,0.017147398,0.33859742],"study_design_scores_gemma":[0.00015964454,0.0013282401,0.0073570027,0.0008963463,0.00013435676,0.0044006123,0.00048256174,0.0070103696,0.10593658,0.15316904,0.7190106,0.00011469271],"about_ca_topic_score_codex":0.00027847983,"about_ca_topic_score_gemma":0.00020535788,"teacher_disagreement_score":0.0022135621,"about_ca_system_score_codex":0.0012088179,"about_ca_system_score_gemma":0.0008025285,"threshold_uncertainty_score":0.008770585},"labels":[],"label_agreement":null},{"id":"W4205882090","doi":"10.3410/f.1169956.632054","title":"Faculty Opinions recommendation of Role of double-stranded RNA pattern recognition receptors in rhinovirus-induced airway epithelial cell responses.","year":2009,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; McGill University","keywords":"TRIF; MDA5; IRF3; IRF7; Biology; Small interfering RNA; Interferon; TLR3; RIG-I; Molecular biology; Interferon regulatory factors; Innate immune system; RNA silencing; Rhinovirus; Transfection; Receptor; Virology; RNA interference; RNA; Virus; Gene; Biochemistry; Toll-like receptor","score_opus":0.031055739552658588,"score_gpt":0.32320086186624125,"score_spread":0.29214512231358264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205882090","genre_codex":"other","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012965256,0.017135264,0.0029009006,0.19411907,0.34002835,0.0004654166,0.006709357,0.0011446786,0.43620044],"genre_scores_gemma":[0.0078039183,0.023874141,0.0022518921,0.030850003,0.0677209,0.00016179887,0.0039348635,0.00061328174,0.8627892],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99785894,0.00016233975,0.00012464018,0.00023758263,0.0013274796,0.00028891684],"domain_scores_gemma":[0.9863723,0.00046809617,0.00047396414,0.00038266776,0.0076965364,0.004606503],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0030418714,0.0008028578,0.0007240826,0.0015059285,0.0015404394,0.00454677,0.0012404273,0.0041185003,0.40855783],"category_scores_gemma":[0.008069694,0.00039593753,0.0008225635,0.0013464527,0.0006220837,0.0021078556,0.0018852332,0.0033175603,0.24326353],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037083195,0.000024669209,0.00018622549,0.00025432822,0.0000059852437,0.000054020293,0.00002544756,0.000029546558,0.00077124743,0.00077270216,0.941187,0.056651633],"study_design_scores_gemma":[0.00000841213,0.000013287556,0.00038352833,0.00015449103,0.0000045175148,0.00003210424,0.000040129504,0.000033759246,0.00018631357,0.00044743705,0.99869055,0.0000054483003],"about_ca_topic_score_codex":0.0036430503,"about_ca_topic_score_gemma":0.009558294,"teacher_disagreement_score":0.40855783,"about_ca_system_score_codex":0.0021529305,"about_ca_system_score_gemma":0.007650242,"threshold_uncertainty_score":0.8436205},"labels":[],"label_agreement":null},{"id":"W4206022968","doi":"10.3410/f.1007718.201945","title":"Faculty Opinions recommendation of IFN-regulatory factor 3-dependent gene expression is defective in Tbk1-deficient mouse embryonic fibroblasts.","year":2004,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Wellcome Trust; National Institutes of Health; Cancer Research Institute","keywords":"IRF3; TANK-binding kinase 1; TRIF; Phosphorylation; IκB kinase; Transcription factor; Molecular biology; Biology; Cell biology; Interferon regulatory factors; Signal transduction; Gene; Receptor; Innate immune system; Toll-like receptor; Protein kinase A; NF-κB; Biochemistry","score_opus":0.022112038480410292,"score_gpt":0.32070265286577837,"score_spread":0.2985906143853681,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206022968","genre_codex":"other","genre_gemma":"dataset","domain_codex":null,"domain_gemma":"evaluation","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":null,"domain_candidate":"evaluation","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0072573647,0.0058900984,0.0052967225,0.038989343,0.048365943,0.00040067662,0.008888988,0.0023942238,0.8825166],"genre_scores_gemma":[0.0104111675,0.0041411696,0.0019845725,0.0031490421,0.0040686415,0.00006434782,0.0041017625,0.0004070244,0.97167236],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991679,0.000045151784,0.000048378195,0.00011090704,0.0005099637,0.00011780069],"domain_scores_gemma":[0.99799144,0.00008214938,0.00016398498,0.00019297346,0.0008431203,0.00072641455],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009312619,0.0006813568,0.00043189412,0.001140797,0.0010987128,0.0027049633,0.0008131713,0.0015654772,0.45806786],"category_scores_gemma":[0.0016037388,0.00039450076,0.0004622712,0.0010918098,0.0005811393,0.00072758226,0.00093184103,0.0017864694,0.31338108],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020088656,0.00018279943,0.0009432651,0.00048596953,0.000034158904,0.00039945304,0.000097232754,0.0002228135,0.04878234,0.0046005254,0.76679057,0.17726004],"study_design_scores_gemma":[0.000018695457,0.000024713754,0.0009807561,0.00006992824,0.0000072859875,0.000051841766,0.00003886314,0.00014256642,0.0027114463,0.00050384976,0.9954423,0.000007722562],"about_ca_topic_score_codex":0.004078696,"about_ca_topic_score_gemma":0.011083821,"teacher_disagreement_score":0.99906874,"about_ca_system_score_codex":0.0014065532,"about_ca_system_score_gemma":0.0032865142,"threshold_uncertainty_score":0.7730004},"labels":[],"label_agreement":null},{"id":"W4206157964","doi":"10.1101/2022.01.08.475499","title":"Lipid nanoparticles delivering constitutively active STING mRNA as a novel anti-cancer therapeutic approach","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Acuitas Therapeutics (Canada)","funders":"National Institutes of Health; Monash University; National Cancer Institute; Center for AIDS Research, University of Washington; University of Pennsylvania","keywords":"Sting; Cancer research; Tumor microenvironment; Chemokine; Medicine; Immune system; Immunotherapy; CD8; Cancer cell; Cancer; Immunology; Internal medicine","score_opus":0.026685003744115594,"score_gpt":0.24912654468775927,"score_spread":0.22244154094364368,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206157964","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96709085,0.0032672214,0.022357168,0.0005148636,0.00015276,0.00010206323,0.00018601309,0.0002939459,0.00603515],"genre_scores_gemma":[0.9829025,0.0013812182,0.010933273,0.00012771263,0.000027867098,0.00005183,0.00012711673,0.000029783936,0.0044185854],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99995923,0.000006449559,0.0000024730844,0.000010126811,0.000013400692,0.000008386578],"domain_scores_gemma":[0.99998,0.0000035466292,0.0000060353727,0.0000021958022,0.0000034993543,0.000004714031],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008625469,0.00024085683,0.00013358245,0.00014797752,0.00009809734,0.00023046188,0.00012875187,0.00030010834,0.000728244],"category_scores_gemma":[0.000050119725,0.00008577714,0.00014885438,0.000074930926,0.00017087978,0.0001700518,0.000153162,0.00038161557,0.00029233893],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029996152,0.000013939518,0.000023591516,0.000023357794,0.0000016974263,0.000028461469,0.0000064808405,0.00012965142,0.99738437,0.0001872408,0.00006217582,0.0021091148],"study_design_scores_gemma":[0.000013393953,0.00019808662,0.00013409245,0.000003269246,0.000008146054,0.00007635798,0.0000056115464,0.0012154186,0.99529594,0.00004343997,0.0030036517,0.0000025946922],"about_ca_topic_score_codex":0.00032017645,"about_ca_topic_score_gemma":0.000309672,"teacher_disagreement_score":0.000728244,"about_ca_system_score_codex":0.00025230722,"about_ca_system_score_gemma":0.0001377149,"threshold_uncertainty_score":0.0024362206},"labels":[],"label_agreement":null},{"id":"W4206298590","doi":"10.1016/j.cytogfr.2022.01.004","title":"Revisiting IRF1-mediated antiviral innate immunity","year":2022,"lang":"en","type":"review","venue":"Cytokine & Growth Factor Reviews","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":93,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"IRF1; IRF7; Biology; Innate immune system; Immune system; Immunity; Mechanism (biology); Viral infection; Immunology; Computational biology; Genetics; Transcription factor; Virus; Gene","score_opus":0.07335560056944962,"score_gpt":0.3292897915684425,"score_spread":0.2559341909989929,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206298590","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006760377,0.9964395,0.00020110399,0.0006462708,0.0018485931,0.0000031542684,0.000012892736,0.000007874312,0.00077294477],"genre_scores_gemma":[0.0006448728,0.9953949,0.00020412839,0.0008350181,0.0019354017,0.0000072345642,0.000036688503,0.0000029452347,0.00093877484],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997414,0.000048592217,0.000031576135,0.000045176148,0.00008856168,0.00004474267],"domain_scores_gemma":[0.99955624,0.00021232727,0.000042381544,0.000015495998,0.00011488856,0.00005859439],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014053802,0.0014134679,0.0015681747,0.0011742522,0.00023431022,0.0013942636,0.0010925885,0.001645506,0.0030044988],"category_scores_gemma":[0.0010540115,0.00034110947,0.00046540535,0.0010142742,0.00081044564,0.0021960614,0.0010339185,0.003941605,0.0025197146],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002168142,0.00006217212,0.00012266824,0.011035817,0.0000659387,0.00022147075,0.000056606306,0.00032547093,0.0046750363,0.007776743,0.09849969,0.87694156],"study_design_scores_gemma":[0.000036563633,0.000072749935,0.00026435152,0.0016514884,0.000058326525,0.0004710035,0.00003285924,0.00009043547,0.000507821,0.0025432247,0.99425924,0.000011987147],"about_ca_topic_score_codex":0.0005511866,"about_ca_topic_score_gemma":0.0013994137,"teacher_disagreement_score":0.0030044988,"about_ca_system_score_codex":0.00082206243,"about_ca_system_score_gemma":0.001365249,"threshold_uncertainty_score":0.010051012},"labels":[],"label_agreement":null},{"id":"W4206548653","doi":"10.1139/facets-2021-0090","title":"Post-transcriptional regulation of frog innate immunity: discovery of frog microRNAs associated with antiviral responses and ranavirus infection using a <i>Xenopus laevis</i> skin epithelial-like cell line","year":2021,"lang":"en","type":"article","venue":"FACETS","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Biology; Innate immune system; Xenopus; microRNA; Interferon; Ranavirus; Cell biology; Signal transduction; Amphibian; RNA; Virus; Virology; Gene; Immune system; Immunology; Genetics","score_opus":0.014145955238961457,"score_gpt":0.2422019966664303,"score_spread":0.22805604142746885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206548653","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940481,0.0011320529,0.0030294077,0.00004083149,0.000012762361,0.00003464151,0.0007539925,0.0000590865,0.0008891187],"genre_scores_gemma":[0.9888803,0.0008494441,0.0064709387,0.00007147772,0.000011096748,0.00006312485,0.0021516713,0.000028129134,0.0014738697],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998462,0.0000319031,0.000017687455,0.000046716817,0.000031586253,0.000025925538],"domain_scores_gemma":[0.9998807,0.000024437548,0.000050415954,0.0000124976295,0.000014174844,0.00001782975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017082946,0.00027733177,0.00024283175,0.00019285279,0.00015976287,0.0003172897,0.00013192405,0.0001995776,0.0006359154],"category_scores_gemma":[0.0001305545,0.00015374788,0.00032359626,0.00014385422,0.00013510378,0.00016026302,0.00014580139,0.00025213024,0.00028783784],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020664856,0.0000033625277,0.00025736488,0.000012136557,0.000002072196,0.000012812258,0.000005757071,0.000013594842,0.9994318,0.000012549969,0.000005234799,0.00022283486],"study_design_scores_gemma":[0.000007131979,0.00027387435,0.025768407,0.0000049318123,0.000020942129,0.0004099719,0.000034864246,0.0006808651,0.9711419,0.000017533634,0.0016324562,0.0000070051947],"about_ca_topic_score_codex":0.00031482492,"about_ca_topic_score_gemma":0.0005059837,"teacher_disagreement_score":0.0006359154,"about_ca_system_score_codex":0.00022312769,"about_ca_system_score_gemma":0.00011494006,"threshold_uncertainty_score":0.0021273494},"labels":[],"label_agreement":null},{"id":"W4206984086","doi":"10.1101/2022.01.19.476693","title":"SARS-CoV-2 impairs interferon production via NSP2-induced repression of mRNA translation","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; University of Alberta; University of Manitoba; Princess Margaret Cancer Centre; University of Toronto; University Health Network; Children's Hospital of Eastern Ontario; Christie (Canada); McGill University","funders":"Biotechnology and Biological Sciences Research Council; Canadian Institutes of Health Research; China Scholarship Council; Directorate for Biological Sciences; Terry Fox Research Institute; National Research Foundation of Korea; Queen's University; National Research Foundation","keywords":"Messenger RNA; Translation (biology); Innate immune system; Interferon; Psychological repression; Biology; Cell biology; Immune system; Protein biosynthesis; microRNA; Virology; RNA; Mechanism (biology); Immunology; Gene expression; Molecular biology; Gene; Genetics","score_opus":0.029084903390033286,"score_gpt":0.26094067555436967,"score_spread":0.2318557721643364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206984086","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962365,0.00040094944,0.0011601913,0.000078107536,0.00004258195,0.00002143662,0.00060966954,0.000079680736,0.0013708875],"genre_scores_gemma":[0.9924232,0.00024790954,0.001604166,0.000056506287,0.000013452417,0.000039888884,0.00096456707,0.00003573946,0.00461456],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983585,0.000038804326,0.000018347566,0.00002630148,0.000046533318,0.000034128567],"domain_scores_gemma":[0.9999113,0.000015478943,0.000027865368,0.000014461824,0.0000066724438,0.000024198818],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016372974,0.00046907822,0.0002635942,0.00017806728,0.00009669395,0.00023315297,0.00018165505,0.00028267663,0.0019029622],"category_scores_gemma":[0.000082198836,0.00014709686,0.00020625426,0.00008829206,0.0002526652,0.00013362819,0.0001889138,0.00055826997,0.0005710462],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007746253,0.00002507031,0.00004554816,0.000008776234,0.0000018397636,0.00002192213,0.0000029209637,0.000032405696,0.999592,0.00003970569,0.00002055575,0.0001318997],"study_design_scores_gemma":[0.000016256794,0.00018347101,0.0014071807,0.000002546191,0.0000028842992,0.000089614514,0.000009365337,0.0006754992,0.9969176,0.000029859071,0.00066356757,0.0000021880192],"about_ca_topic_score_codex":0.00031487414,"about_ca_topic_score_gemma":0.0003278336,"teacher_disagreement_score":0.0019029622,"about_ca_system_score_codex":0.00021906743,"about_ca_system_score_gemma":0.00016170285,"threshold_uncertainty_score":0.006366074},"labels":[],"label_agreement":null},{"id":"W4210255769","doi":"10.1016/j.xpro.2022.101165","title":"Isolation of endogenous cytosolic DNA from cultured cells","year":2022,"lang":"en","type":"article","venue":"STAR Protocols","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; University Hospital Foundation; Canada Foundation for Innovation; Canadian Institutes of Health Research; Cancer Research Society","keywords":"Cytosol; Endogeny; DNA; Exogenous DNA; Cell biology; Mitochondrial DNA; Mitochondrion; Biology; Compartment (ship); DNA damage; Cell; Genome instability; Biochemistry; Enzyme; Gene","score_opus":0.031062240199860088,"score_gpt":0.2672869765372729,"score_spread":0.2362247363374128,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210255769","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.30114034,0.009176076,0.64665604,0.00096153683,0.0009508105,0.002791998,0.014007286,0.0023351256,0.021980725],"genre_scores_gemma":[0.4957232,0.011123444,0.38158697,0.0008259999,0.0003285535,0.0029966848,0.04475605,0.00080449606,0.061854586],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995028,0.000057712317,0.00006031587,0.0001487395,0.00016907296,0.00006139368],"domain_scores_gemma":[0.9995751,0.000082959385,0.00004020904,0.00012839888,0.00012516344,0.000048265345],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044993366,0.00062916975,0.0005584895,0.0005895891,0.00053562684,0.0006381497,0.00057968654,0.00034844727,0.0031551651],"category_scores_gemma":[0.00037120207,0.00025445875,0.00033323973,0.0006739583,0.00044300238,0.00034142393,0.00066810736,0.0013955582,0.0045368224],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005092595,0.000016647326,0.000104156294,0.00009971007,0.0000041722155,0.000044896628,0.00004301055,0.00004856062,0.99665415,0.00028593186,0.0001581498,0.0024896043],"study_design_scores_gemma":[0.000024125457,0.00014296852,0.00096399855,0.000033666693,0.00001947171,0.00022162117,0.000035303798,0.0006414157,0.9722997,0.00020522386,0.025401289,0.00001121047],"about_ca_topic_score_codex":0.000729063,"about_ca_topic_score_gemma":0.002425956,"teacher_disagreement_score":0.0031551651,"about_ca_system_score_codex":0.00042267988,"about_ca_system_score_gemma":0.00063792436,"threshold_uncertainty_score":0.0105550885},"labels":[],"label_agreement":null},{"id":"W4210270249","doi":"10.4049/jimmunol.2100962","title":"A Novel Non–Mammalian-Specific HERC7 Negatively Regulates IFN Response through Degrading RLR Signaling Factors","year":2022,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China; Chinese Academy of Sciences","keywords":"Biology; Ubiquitin ligase; Subfamily; Cell biology; Mediator; Activator (genetics); Transcription factor; Interferon regulatory factors; Gene; Regulator; Ubiquitin; Crucian carp; IRF1; Genetics; Fish <Actinopterygii>","score_opus":0.03327804317856756,"score_gpt":0.25620560009319265,"score_spread":0.2229275569146251,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210270249","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9855273,0.0049141645,0.0050454508,0.00018977899,0.000057733505,0.00004428912,0.00052154023,0.00016475395,0.0035351175],"genre_scores_gemma":[0.98997796,0.0010817677,0.0028087553,0.0001387907,0.000022071426,0.000032512555,0.001308413,0.000030389516,0.0045994404],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998815,0.0000086455175,0.0000071419763,0.000028495147,0.000037568603,0.00003659603],"domain_scores_gemma":[0.9999176,0.0000072325265,0.000018537721,0.000009809116,0.00001839083,0.000028394394],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011066762,0.00032097782,0.00024140834,0.00024652813,0.00025853608,0.0003201066,0.00025883576,0.00036832408,0.0015458792],"category_scores_gemma":[0.000097641445,0.00009709633,0.00035949153,0.00012313412,0.00021305995,0.00019906314,0.0002861922,0.00036502202,0.0005161692],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009812111,0.000010784385,0.00081444695,0.000040116727,0.000006344477,0.00022415144,0.000008719797,0.00006638592,0.99630296,0.00018829938,0.00012651773,0.0021132138],"study_design_scores_gemma":[0.000029683735,0.00017459532,0.014052153,0.000011957111,0.000039273287,0.0017838385,0.0000722219,0.0023121522,0.9658214,0.00013172135,0.015555791,0.000015215257],"about_ca_topic_score_codex":0.0005373732,"about_ca_topic_score_gemma":0.001004883,"teacher_disagreement_score":0.0015458792,"about_ca_system_score_codex":0.00043813494,"about_ca_system_score_gemma":0.00032135902,"threshold_uncertainty_score":0.005171478},"labels":[],"label_agreement":null},{"id":"W4210442342","doi":"10.1136/annrheumdis-2021-221814","title":"The 2021 European Alliance of Associations for Rheumatology/American College of Rheumatology points to consider for diagnosis and management of autoinflammatory type I interferonopathies: CANDLE/PRAAS, SAVI and AGS","year":2022,"lang":"en","type":"review","venue":"Annals of the Rheumatic Diseases","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":91,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; SickKids Foundation; University of Toronto; London Health Sciences Centre; Lawson Health Research Institute; Western University","funders":"National Institute of Neurological Disorders and Stroke; National Institute of Allergy and Infectious Diseases; Rosetrees Trust","keywords":"Medicine; Rheumatology; Intensive care medicine; Internal medicine","score_opus":0.06363053757514664,"score_gpt":0.3445272392866079,"score_spread":0.28089670171146125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210442342","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000065338725,0.9877087,0.00031568712,0.0038668637,0.0055600908,0.00002133435,0.00007082692,0.000039484024,0.0023516165],"genre_scores_gemma":[0.0005264266,0.98362917,0.0007930061,0.0058914186,0.005969876,0.000023686405,0.00018826377,0.000008970845,0.0029691085],"study_design_codex":"design_other","study_design_gemma":"systematic_review","domain_scores_codex":[0.99954104,0.00007955791,0.000069848575,0.0000575995,0.00019415858,0.000057936217],"domain_scores_gemma":[0.998789,0.0003775563,0.00019926943,0.00003097797,0.0004130081,0.00019013496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013320507,0.00091820984,0.0016973093,0.0022124103,0.0003051001,0.0015150353,0.0010509243,0.002164466,0.0077722287],"category_scores_gemma":[0.002511026,0.00026624068,0.00079418154,0.0013988807,0.0004636859,0.0017058898,0.0010574145,0.004339948,0.0060682627],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010370862,0.000056470424,0.00011619112,0.005301234,0.000065024455,0.00012774955,0.000016262333,0.0001347865,0.00048436288,0.0013576458,0.24339253,0.748844],"study_design_scores_gemma":[0.00006503762,0.00007297863,0.00037674836,0.0033514258,0.000092511335,0.00050801627,0.000016026617,0.000056273122,0.00007663399,0.0008176705,0.9945543,0.000012349193],"about_ca_topic_score_codex":0.0010717656,"about_ca_topic_score_gemma":0.0027538785,"teacher_disagreement_score":0.0077722287,"about_ca_system_score_codex":0.00075188506,"about_ca_system_score_gemma":0.0019065266,"threshold_uncertainty_score":0.026000738},"labels":[],"label_agreement":null},{"id":"W4210605178","doi":"10.1016/j.cellsig.2022.110269","title":"FLI1 regulates inflammation-associated genes to accelerate leukemogenesis","year":2022,"lang":"en","type":"article","venue":"Cellular Signalling","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"FLI1; JUNB; Transcription factor; Biology; Cancer research; Oncogene; Inflammation; Tumor necrosis factor alpha; Cell biology; Cancer; Cell cycle; Gene; Immunology; Genetics","score_opus":0.01740407574599743,"score_gpt":0.21819529610447858,"score_spread":0.20079122035848115,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210605178","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9570366,0.011551921,0.008782973,0.0021333464,0.00045308433,0.00010608937,0.003171245,0.0014183584,0.01534639],"genre_scores_gemma":[0.9833903,0.0014742167,0.0027440402,0.0005626886,0.00007495477,0.000066485205,0.0017095294,0.00015016473,0.009827844],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99963534,0.00003940472,0.000015195872,0.00008029092,0.00006419269,0.00016544551],"domain_scores_gemma":[0.9997359,0.0000295319,0.00008608657,0.000022167322,0.000030312547,0.00009611357],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029106962,0.00058221567,0.0003525853,0.0006256856,0.0003234917,0.00083970034,0.00032778239,0.0006240838,0.0049369805],"category_scores_gemma":[0.00023864499,0.00022782665,0.0004687843,0.00017864667,0.00036882478,0.00039379948,0.000452384,0.001899464,0.001543093],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024616544,0.000042561504,0.00030409344,0.000048107137,0.0000061270184,0.00006050225,0.000015437321,0.00010538866,0.9960174,0.00036076605,0.00038704675,0.002406426],"study_design_scores_gemma":[0.000050975326,0.0002911799,0.014205809,0.00002902111,0.00002595998,0.00024222174,0.000098611614,0.0011129212,0.9734944,0.00030074397,0.010133542,0.000014589307],"about_ca_topic_score_codex":0.0004814558,"about_ca_topic_score_gemma":0.0010815448,"teacher_disagreement_score":0.0049369805,"about_ca_system_score_codex":0.0009312957,"about_ca_system_score_gemma":0.00030788805,"threshold_uncertainty_score":0.01651591},"labels":[],"label_agreement":null},{"id":"W4210818486","doi":"10.3390/v14020281","title":"Viral Proteins with PxxP and PY Motifs May Play a Role in Multiple Sclerosis","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Multiple sclerosis; Virus; Biology; Virology; Cytomegalovirus; Disease; Immune system; Cell biology; Immunology; Herpesviridae; Medicine; Viral disease; Pathology","score_opus":0.08077947837192721,"score_gpt":0.28396537813429246,"score_spread":0.20318589976236523,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210818486","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016585398,0.99825555,0.00011928596,0.00019844633,0.00021687332,0.0000023675043,0.00000938688,0.0000052770247,0.0010269828],"genre_scores_gemma":[0.00078227045,0.99808204,0.0001668289,0.00012966592,0.00016795097,0.0000037382674,0.000021428152,0.0000012207325,0.0006449474],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999169,0.000014401869,0.000012987201,0.000017771015,0.000027670092,0.000010234489],"domain_scores_gemma":[0.9998896,0.00004923278,0.000016225047,0.0000035617065,0.000027733111,0.000013541998],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002483797,0.0005938553,0.00072983955,0.0014232505,0.00020561904,0.0007048845,0.00041549336,0.00070490356,0.002460906],"category_scores_gemma":[0.00030639203,0.00014862377,0.0002822202,0.0013930692,0.000305783,0.0009843732,0.0005353796,0.0011953964,0.0015077722],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006984753,0.000051437593,0.00027512887,0.011230992,0.000053205906,0.0003854194,0.0000835822,0.00026451217,0.0051891184,0.0040290267,0.01895082,0.9594169],"study_design_scores_gemma":[0.000008270079,0.00008481953,0.00096049625,0.0018675956,0.00007365419,0.0022389092,0.0000635678,0.00006166034,0.00084018,0.0016197064,0.9921679,0.000013306439],"about_ca_topic_score_codex":0.0004515034,"about_ca_topic_score_gemma":0.00073236093,"teacher_disagreement_score":0.002460906,"about_ca_system_score_codex":0.00031949743,"about_ca_system_score_gemma":0.000597609,"threshold_uncertainty_score":0.008232534},"labels":[],"label_agreement":null},{"id":"W4210889746","doi":"10.3389/fcimb.2022.820273","title":"Type-I Interferon Signaling in Fanconi Anemia","year":2022,"lang":"en","type":"review","venue":"Frontiers in Cellular and Infection Microbiology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Trois-Rivières","funders":"Mitacs; Université du Québec à Trois-Rivières","keywords":"Fanconi anemia; Premature aging; Genome instability; Stimulator of interferon genes; Biology; DNA repair; DNA damage; Bone marrow failure; Cancer research; Interferon; Genetics; Immunology; Gene; DNA; Innate immune system; Receptor; Stem cell","score_opus":0.023050592116866775,"score_gpt":0.2694912067725389,"score_spread":0.24644061465567213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210889746","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0018440387,0.9942841,0.00024626323,0.0003930823,0.000422774,0.000006002318,0.000040239036,0.0000113724345,0.0027521334],"genre_scores_gemma":[0.014394301,0.97990066,0.00028939918,0.00060703664,0.00074584835,0.000019741057,0.00019576387,0.0000035447376,0.0038437184],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999343,0.0000126477735,0.0000099098515,0.000010764923,0.000020752665,0.000011671225],"domain_scores_gemma":[0.9999654,0.000010133801,0.000008878371,7.425705e-7,0.000008991442,0.0000058892288],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018873088,0.00040048754,0.0003131062,0.0004437596,0.00017121626,0.00043776046,0.0002412061,0.0006492736,0.0017933318],"category_scores_gemma":[0.00011978278,0.000107290514,0.00021454686,0.00044714063,0.00012621193,0.00033323368,0.0002099966,0.0006412144,0.0006287172],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036125295,0.00009070641,0.00085622113,0.0117064435,0.000104009094,0.0012083466,0.0002152397,0.0012096438,0.06877927,0.010832179,0.048372462,0.8562642],"study_design_scores_gemma":[0.000034400473,0.0002215805,0.0035027745,0.0017636917,0.0001207345,0.0025672002,0.000074992065,0.00030839338,0.0067372024,0.0030097035,0.9816321,0.000027176857],"about_ca_topic_score_codex":0.0007037538,"about_ca_topic_score_gemma":0.0010038414,"teacher_disagreement_score":0.0017933318,"about_ca_system_score_codex":0.0004605881,"about_ca_system_score_gemma":0.0004084463,"threshold_uncertainty_score":0.005999267},"labels":[],"label_agreement":null},{"id":"W4213269292","doi":"10.1080/10635150309331","title":"18S Ribosomal RNA and Tetrapod Phylogeny","year":2003,"lang":"en","type":"article","venue":"Systematic Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; University of Ottawa","keywords":"Biology; 18S ribosomal RNA; Phylogenetics; Evolutionary biology; Ribosomal RNA; Tetrapod (structure); Zoology; Paleontology; Genetics; Gene","score_opus":0.011484037362243285,"score_gpt":0.23761099146168438,"score_spread":0.22612695409944109,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213269292","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9381392,0.04604009,0.005242982,0.00060532463,0.00005697333,0.0000064840947,0.0003459383,0.00003755393,0.0095254285],"genre_scores_gemma":[0.98511153,0.009834654,0.0035042285,0.0001176941,0.00007113405,0.0000054552092,0.00039684997,0.000008953204,0.0009494382],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99983037,0.000040047726,0.000013898546,0.000063702595,0.00002657282,0.000025349316],"domain_scores_gemma":[0.99971205,0.00007934343,0.000118000826,0.000015049524,0.00003637967,0.000039169594],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030666613,0.000115447314,0.00016891089,0.0008194638,0.00017019747,0.0003863642,0.00014323201,0.00022719278,0.001316603],"category_scores_gemma":[0.0006245667,0.00006520098,0.00007220516,0.00071984535,0.00031650058,0.00040879744,0.00030043902,0.00021915078,0.00031417908],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00093488616,0.00005139531,0.383698,0.0008290678,0.00016605922,0.0010995762,0.0014226154,0.004166973,0.17579071,0.013920654,0.0015422726,0.41637793],"study_design_scores_gemma":[0.000017541923,0.00025188265,0.92456084,0.0003015647,0.000046318655,0.0019001943,0.00078991643,0.0059701726,0.008076036,0.022981089,0.035077374,0.000027001666],"about_ca_topic_score_codex":0.0007762612,"about_ca_topic_score_gemma":0.0011102712,"teacher_disagreement_score":0.001316603,"about_ca_system_score_codex":0.00029076068,"about_ca_system_score_gemma":0.00012436285,"threshold_uncertainty_score":0.004404485},"labels":[],"label_agreement":null},{"id":"W4213312886","doi":"10.1016/j.freeradbiomed.2021.12.189","title":"Reversible thiol oxidation of the MAVS signaling adaptor: a novel regulatory mechanism of the antiviral response","year":2022,"lang":"en","type":"article","venue":"Free Radical Biology and Medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Signal transducing adaptor protein; Mechanism (biology); Chemistry; Cell biology; Thiol; Signal transduction; Biochemistry; Biology; Philosophy","score_opus":0.014051355411998284,"score_gpt":0.24183701275752553,"score_spread":0.22778565734552725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213312886","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9485229,0.006011385,0.03340981,0.0019058168,0.00035587756,0.000071717164,0.0001861717,0.0005447461,0.008991535],"genre_scores_gemma":[0.99359834,0.00067264785,0.0021427812,0.00013010278,0.00006337692,0.00001797588,0.00009705611,0.000019144754,0.0032585773],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998573,0.000018933022,0.000004912451,0.00004344198,0.000037071568,0.000038386108],"domain_scores_gemma":[0.9999156,0.000016729191,0.000017007731,0.000018938279,0.000014885735,0.000016757116],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029989867,0.0003144011,0.0002551937,0.00021677998,0.00037413448,0.000600395,0.0005088411,0.0006044789,0.002353383],"category_scores_gemma":[0.00022797198,0.00015395209,0.00028246193,0.000111926194,0.00040976156,0.00075933797,0.0003936889,0.0006792089,0.0004688507],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016093865,0.000025024432,0.00037947964,0.00005091297,0.00001288635,0.00017065056,0.000062361614,0.00019910453,0.98684025,0.0073698484,0.00024593234,0.004482592],"study_design_scores_gemma":[0.00003423277,0.0003044721,0.0028906856,0.000011825475,0.000020141359,0.0005009591,0.00012937337,0.0058357907,0.9787434,0.0057523004,0.005758126,0.000018754718],"about_ca_topic_score_codex":0.0002012738,"about_ca_topic_score_gemma":0.00026147784,"teacher_disagreement_score":0.002353383,"about_ca_system_score_codex":0.00053610414,"about_ca_system_score_gemma":0.00027031108,"threshold_uncertainty_score":0.00787282},"labels":[],"label_agreement":null},{"id":"W4214604533","doi":"10.3390/v14030471","title":"Transient Increases in Inflammation and Proapoptotic Potential Are Associated with the HESN Phenotype Observed in a Subgroup of Kenyan Female Sex Workers","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada; University of Winnipeg","funders":"Canadian Institutes of Health Research; Public Health Agency of Canada","keywords":"Proinflammatory cytokine; Phenotype; Interferon; Peripheral blood mononuclear cell; Immune system; Human immunodeficiency virus (HIV); Immunology; Inflammation; Biology; Gene; In vitro; Genetics","score_opus":0.020458875313516322,"score_gpt":0.22059023173327177,"score_spread":0.20013135641975546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214604533","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99928004,0.000100046505,0.00010858745,0.000014389375,0.0000039322686,0.000010354202,0.00018618314,0.0000030920824,0.0002933833],"genre_scores_gemma":[0.99805367,0.00010277562,0.00015835921,0.00003003429,0.0000049265723,0.00002469131,0.00025638257,0.0000031353418,0.0013660938],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99990654,0.000008849531,0.0000098576775,0.000030793395,0.00001946673,0.000024518671],"domain_scores_gemma":[0.99988186,0.000011440824,0.000042420143,0.000013234946,0.000018895282,0.000032089585],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009762198,0.0002085082,0.00020175974,0.00030114502,0.00032138292,0.00021677399,0.00010583268,0.00020492345,0.002156845],"category_scores_gemma":[0.00015242233,0.00011750457,0.00016416448,0.00011410845,0.00025485962,0.00009547771,0.0002152269,0.00021896533,0.00027812374],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007598173,0.000069580776,0.11726002,0.000109107394,0.000021412887,0.0010886742,0.00058402907,0.000027474744,0.8755188,0.000039718438,0.000118154494,0.004403268],"study_design_scores_gemma":[0.0000141418495,0.00091911264,0.92238986,0.00002547301,0.00003388302,0.0034219497,0.0021423327,0.00010704531,0.06859605,0.00008105696,0.002255666,0.000013414157],"about_ca_topic_score_codex":0.00073334255,"about_ca_topic_score_gemma":0.0019382593,"teacher_disagreement_score":0.002156845,"about_ca_system_score_codex":0.00010996084,"about_ca_system_score_gemma":0.00011514443,"threshold_uncertainty_score":0.0072153807},"labels":[],"label_agreement":null},{"id":"W4220708893","doi":"10.1002/jmv.27701","title":"When RING finger family proteins meet SARS‐CoV‐2","year":2022,"lang":"en","type":"review","venue":"Journal of Medical Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Virology; Innate immune system; Biology; Coronavirus; Viral envelope; Virus; Glycoprotein; Viral replication; Crosstalk; Viral entry; Immune system; Immunology; Infectious disease (medical specialty); Coronavirus disease 2019 (COVID-19); Disease; Genetics; Medicine","score_opus":0.07146844982999061,"score_gpt":0.3490833247128848,"score_spread":0.27761487488289416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220708893","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00037483295,0.99652654,0.00017262017,0.0005594574,0.00063543423,0.0000058558544,0.000022802873,0.000014132225,0.001688431],"genre_scores_gemma":[0.002604522,0.993313,0.0002690478,0.0007995713,0.0005079123,0.0000097780985,0.00006841205,0.0000033590616,0.002424262],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998933,0.000019555899,0.000014431721,0.000018514198,0.00003757514,0.000016622362],"domain_scores_gemma":[0.9999312,0.00002060055,0.000014139956,0.0000025114705,0.000019796737,0.000011733407],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029136922,0.00047833283,0.0007485168,0.00064480555,0.00017470734,0.0006667446,0.0005451451,0.0009084304,0.0023353826],"category_scores_gemma":[0.0003160582,0.00019641884,0.00030262064,0.00045634745,0.00026570688,0.0011903828,0.00048960245,0.0015908616,0.0024670416],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018001748,0.00003579128,0.00020340222,0.011981212,0.000088048255,0.0004070594,0.00009241468,0.00026915644,0.010984997,0.005609459,0.053819064,0.9163294],"study_design_scores_gemma":[0.000015260708,0.00007803894,0.00050226855,0.00080886163,0.00004317001,0.0012032989,0.000040597533,0.00005997547,0.0014533332,0.001311059,0.9944735,0.000010630967],"about_ca_topic_score_codex":0.00038008086,"about_ca_topic_score_gemma":0.00087878696,"teacher_disagreement_score":0.0023353826,"about_ca_system_score_codex":0.00041241088,"about_ca_system_score_gemma":0.00041135587,"threshold_uncertainty_score":0.007812619},"labels":[],"label_agreement":null},{"id":"W4220797685","doi":"10.1101/2022.03.08.483326","title":"Activation of the cGAS-STING innate immune response in cells with deficient mitochondrial topoisomerase TOP1MT","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotchkiss Brain Institute; University of British Columbia; Alberta Children's Hospital; BC Children's Hospital; BP (Canada); University of Calgary","funders":"Alberta Children's Hospital Research Institute; Alberta Children's Hospital Foundation; Natural Sciences and Engineering Research Council of Canada; Lupus Canada; National Cancer Institute; National Institutes of Health; Children's Hospital Foundation; American College Health Foundation; BC Children's Hospital","keywords":"Innate immune system; Sting; Biology; Mitochondrial DNA; Cell biology; Immune system; Stimulator of interferon genes; Mitochondrion; Immunology; Acquired immune system; Genetics; Gene","score_opus":0.009606402818251975,"score_gpt":0.21073398022604634,"score_spread":0.20112757740779436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220797685","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937511,0.00052541454,0.0038853327,0.00013102534,0.00004145518,0.000031473504,0.0009776484,0.00009600254,0.0005605317],"genre_scores_gemma":[0.9964342,0.0002582572,0.0013882112,0.000039003724,0.0000076215238,0.000027160988,0.00082625914,0.000018406106,0.0010009194],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998072,0.00003337596,0.000032477557,0.000041898697,0.000050761773,0.00003441051],"domain_scores_gemma":[0.9998388,0.000031016298,0.00005671328,0.000026932164,0.000009957187,0.0000364863],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014751642,0.00047110947,0.00036318944,0.00017353124,0.00017127341,0.00034436287,0.00023045068,0.00041968934,0.0012746503],"category_scores_gemma":[0.00015780855,0.00011213247,0.00037190467,0.00019682343,0.00032817072,0.00021524639,0.00022861455,0.00090889836,0.00047180918],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053229956,0.000012676642,0.00013240188,0.000016649914,0.000004134204,0.000090406036,0.000007970049,0.000030422707,0.9992829,0.000041939995,0.00001691192,0.00031032256],"study_design_scores_gemma":[0.000013838819,0.00020543142,0.0028489374,0.0000038976154,0.000012238552,0.0005910022,0.00003124687,0.0009630269,0.99389726,0.000043995617,0.0013844733,0.0000046637356],"about_ca_topic_score_codex":0.00059390394,"about_ca_topic_score_gemma":0.00056493445,"teacher_disagreement_score":0.0012746503,"about_ca_system_score_codex":0.0003703933,"about_ca_system_score_gemma":0.00020027508,"threshold_uncertainty_score":0.0042641163},"labels":[],"label_agreement":null},{"id":"W4220842501","doi":"10.1002/art.42087","title":"The 2021 European Alliance of Associations for Rheumatology/American College of Rheumatology Points to Consider for Diagnosis and Management of Autoinflammatory Type I Interferonopathies: <scp>CANDLE</scp>/<scp>PRAAS</scp>, <scp>SAVI</scp>, and <scp>AGS</scp>","year":2022,"lang":"en","type":"review","venue":"Arthritis & Rheumatology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto; Lawson Health Research Institute; SickKids Foundation; Western University","funders":"National Institutes of Health; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Rosetrees Trust; National Human Genome Research Institute; Hamilton Health Sciences; Deutsche Forschungsgemeinschaft; National Institute of Allergy and Infectious Diseases; American College of Rheumatology Research and Education Foundation","keywords":"Rheumatology; Medicine; Disease; Internal medicine; Psychology; Intensive care medicine","score_opus":0.025182762917667658,"score_gpt":0.28502677917887775,"score_spread":0.2598440162612101,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220842501","genre_codex":"commentary","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.005909087,0.1397848,0.028583772,0.49371147,0.16425659,0.0046890187,0.008325444,0.0017704857,0.15296939],"genre_scores_gemma":[0.059573956,0.16987598,0.17797378,0.22980373,0.08899581,0.013264385,0.02972743,0.0012875203,0.22949745],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.97300255,0.007649145,0.005016675,0.0017505735,0.009376116,0.0032048873],"domain_scores_gemma":[0.9127749,0.012350914,0.018434424,0.0029346345,0.039515283,0.013989815],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.034166418,0.001415814,0.0023177478,0.0057002236,0.0015886063,0.007743741,0.0026728942,0.0108110625,0.027861577],"category_scores_gemma":[0.040564317,0.0011009717,0.0020731655,0.0031423338,0.0014156887,0.0032291522,0.0042163986,0.0073552346,0.031205991],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023655493,0.00019075313,0.0028399278,0.0020853963,0.00008273987,0.0002718941,0.00012037168,0.00025182642,0.001581675,0.0043037543,0.6875843,0.30045086],"study_design_scores_gemma":[0.00026787742,0.00012173106,0.0066598617,0.0038791858,0.000068618385,0.0005771837,0.00020356312,0.00033304482,0.0002768886,0.002616487,0.98493433,0.0000611965],"about_ca_topic_score_codex":0.00285093,"about_ca_topic_score_gemma":0.0046004294,"teacher_disagreement_score":0.034166418,"about_ca_system_score_codex":0.0024486855,"about_ca_system_score_gemma":0.017887171,"threshold_uncertainty_score":0.18069142},"labels":[],"label_agreement":null},{"id":"W4220902317","doi":"10.1002/rmv.2343","title":"Crosstalk between RNA viruses and DNA sensors: Role of the cGAS‐STING signalling pathway","year":2022,"lang":"en","type":"review","venue":"Reviews in Medical Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Crosstalk; Sting; Signalling; Virology; RNA; DNA; Biology; RIG-I; Cell biology; Computational biology; Genetics; Physics; Gene; Engineering; Electronic engineering","score_opus":0.06454780988878216,"score_gpt":0.3396347316182617,"score_spread":0.2750869217294795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220902317","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00022504166,0.9981729,0.00017121018,0.00021338159,0.00020435383,0.000003009389,0.000012590095,0.000008172702,0.0009894259],"genre_scores_gemma":[0.0013942107,0.9971396,0.0001776971,0.00017038046,0.00020085204,0.000005267829,0.000029973064,0.0000014220933,0.0008806625],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99988747,0.000020740415,0.000013429794,0.000021074302,0.000039660386,0.000017599694],"domain_scores_gemma":[0.99990535,0.00003783164,0.000016269229,0.0000026917817,0.000023360983,0.000014528464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029050437,0.00069469505,0.0007431301,0.001140463,0.00018752276,0.00086084363,0.00055325567,0.00090832653,0.0022237424],"category_scores_gemma":[0.00023888722,0.00018246383,0.00036142964,0.00085765467,0.0003127088,0.0010183529,0.000569991,0.0012270918,0.0014380806],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012701956,0.000059994883,0.00021959576,0.013965727,0.00009771266,0.00039200453,0.000101540965,0.0005103442,0.0145494295,0.0061967545,0.019805323,0.94397455],"study_design_scores_gemma":[0.0000144454325,0.00012097666,0.0011631056,0.0020315435,0.00007760004,0.001684089,0.000077865356,0.00015331742,0.0028440773,0.0023978157,0.9894134,0.000021795278],"about_ca_topic_score_codex":0.00036939202,"about_ca_topic_score_gemma":0.00058267365,"teacher_disagreement_score":0.0022237424,"about_ca_system_score_codex":0.00048299727,"about_ca_system_score_gemma":0.000705003,"threshold_uncertainty_score":0.0074391365},"labels":[],"label_agreement":null},{"id":"W4221078429","doi":"10.4274/jcrpe.galenos.2021.2021.0039","title":"Precocious Pseudo-puberty in a Two-year-old Girl, Presenting with Bilateral Ovarian Enlargement and Progressing to Unilateral Juvenile Granulosa Cell Tumour","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Research in Pediatric Endocrinology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Hospital for Sick Children","keywords":"Medicine; McCune–Albright syndrome; Breast development; Breast enlargement; Bone age; Luteinizing hormone; Endocrinology; Internal medicine; Ovarian reserve; Ovarian cyst; Polycystic ovary; Follicular phase; Ovary; Cyst; Precocious puberty; Hormone; Pregnancy; Pathology; Infertility; Biology","score_opus":0.06546719871856967,"score_gpt":0.41264340432971564,"score_spread":0.347176205611146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4221078429","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926838,0.0023789704,0.0006107211,0.0015292953,0.00015010046,0.00006170294,0.0002042708,0.00009398674,0.0022872258],"genre_scores_gemma":[0.99668175,0.0011683645,0.0005655882,0.00038480488,0.00018732458,0.000018289791,0.000101943595,0.000018309545,0.0008736966],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99968946,0.000024198274,0.000036998663,0.00008734917,0.000051201514,0.00011083104],"domain_scores_gemma":[0.99910635,0.00019339145,0.00020238162,0.00005723268,0.00005510678,0.0003855508],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019286861,0.0011543246,0.000815434,0.0016873153,0.0013946374,0.00086222286,0.0005453109,0.0027617824,0.0014487361],"category_scores_gemma":[0.002153201,0.0009596376,0.00067854475,0.0009392685,0.00093405385,0.0011883028,0.0008688403,0.001755826,0.00042673352],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037993068,0.000031088868,0.010100728,0.000019286255,0.0000035016692,0.98781013,0.00013984714,0.000025760159,0.00087196537,0.000053523803,0.00009993891,0.00080619735],"study_design_scores_gemma":[0.000016067997,0.00009399686,0.014713029,0.000007874277,0.000008287789,0.9842243,0.00010954962,0.00010066519,0.00024812273,0.000050821607,0.00042055038,0.000006664984],"about_ca_topic_score_codex":0.0028069266,"about_ca_topic_score_gemma":0.003599202,"teacher_disagreement_score":0.0028069266,"about_ca_system_score_codex":0.0007287421,"about_ca_system_score_gemma":0.00058639306,"threshold_uncertainty_score":0.0055811405},"labels":[],"label_agreement":null},{"id":"W4223537663","doi":"10.1126/scisignal.abg8744","title":"SARS-CoV-2 spike protein–induced cell fusion activates the cGAS-STING pathway and the interferon response","year":2022,"lang":"en","type":"article","venue":"Science Signaling","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":116,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"IRF3; Interferon; Biology; Coronavirus; Virology; Effector; Fusion protein; Cell biology; Immunology; Innate immune system; Immune system; Gene; Medicine; Coronavirus disease 2019 (COVID-19); Recombinant DNA; Disease; Genetics; Infectious disease (medical specialty)","score_opus":0.02276624164457352,"score_gpt":0.25645867308638953,"score_spread":0.233692431441816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4223537663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915011,0.002686987,0.0020907675,0.00028424498,0.00007904452,0.00004728885,0.00035872526,0.00008267047,0.0028691206],"genre_scores_gemma":[0.99659085,0.00073783414,0.0006420858,0.000091593516,0.000016461265,0.000024375735,0.00036154978,0.0000049590644,0.0015302442],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980384,0.00004624714,0.000011951946,0.00002791469,0.000047599697,0.00006260031],"domain_scores_gemma":[0.9999347,0.000005906186,0.00002222086,0.0000075640096,0.00000836878,0.00002135904],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001559886,0.00043525302,0.00022383877,0.00018016847,0.00017314497,0.00030698764,0.00009554238,0.0004123425,0.0013759984],"category_scores_gemma":[0.000088087785,0.00011159539,0.000432781,0.000107441025,0.00020157841,0.00020885143,0.00034496514,0.00062264904,0.00047002194],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027233738,0.000046638557,0.00090246665,0.000039740942,0.000008944744,0.00026276492,0.000016102014,0.00011054406,0.99613994,0.00028152196,0.00011637538,0.0018027897],"study_design_scores_gemma":[0.000111872476,0.0008075951,0.046217494,0.000030309406,0.00003525088,0.0014237462,0.00013489621,0.0052153002,0.9387918,0.00069364934,0.006526139,0.00001186707],"about_ca_topic_score_codex":0.00015738673,"about_ca_topic_score_gemma":0.00023072505,"teacher_disagreement_score":0.0013759984,"about_ca_system_score_codex":0.00040678767,"about_ca_system_score_gemma":0.00021917964,"threshold_uncertainty_score":0.004603207},"labels":[],"label_agreement":null},{"id":"W4223609646","doi":"10.1038/s41467-022-29335-z","title":"Modification of BRCA1-associated breast cancer risk by HMMR overexpression","year":2022,"lang":"en","type":"article","venue":"Nature Communications","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; BC Cancer Agency; Princess Margaret Cancer Centre; BC Children's Hospital; University Health Network; University of British Columbia","funders":"National Cancer Institute; University of British Columbia; European Regional Development Fund; Instituto de Salud Carlos III; Canadian Institutes of Health Research; Departament de Salut, Generalitat de Catalunya; Universitat de Barcelona; Ministerio de Economía y Competitividad; Departament d'Innovació, Universitats i Empresa, Generalitat de Catalunya; Generalitat de Catalunya; Centro de Investigación Biomédica en Red de Cáncer; Centres de Recerca de Catalunya; BC Children's Hospital","keywords":"Breast cancer; Carcinogenesis; Cancer research; Biology; Genome instability; Cancer; DNA damage; Genetics; DNA","score_opus":0.013422450009153649,"score_gpt":0.29391739231631797,"score_spread":0.2804949423071643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4223609646","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947364,0.0012407568,0.002272818,0.000122334,0.000014555457,0.0000082133465,0.00036430382,0.00012461886,0.0011160173],"genre_scores_gemma":[0.9976044,0.0003533286,0.0011279472,0.000020816407,0.000004303783,0.0000062724084,0.00017265583,0.00001127009,0.00069909275],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984276,0.00004027873,0.000010475267,0.000039845858,0.000034198267,0.000032411444],"domain_scores_gemma":[0.99984384,0.000023804465,0.000075906115,0.000026396148,0.000006594885,0.000023417939],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001630444,0.00020204176,0.00015782044,0.00023137471,0.000090217305,0.00024152416,0.00011564388,0.0002341039,0.0014820286],"category_scores_gemma":[0.00017114934,0.000114292605,0.00021972992,0.00013475664,0.00015447765,0.00013747938,0.00022388058,0.00028765542,0.00023197751],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021944968,0.000017682778,0.006153447,0.000025891752,0.000013853848,0.0001849951,0.000014334924,0.00011732982,0.99056846,0.00013109138,0.000056230165,0.0024973056],"study_design_scores_gemma":[0.000023510465,0.00034944288,0.13593167,0.000015604752,0.000058379057,0.002623864,0.00008855469,0.0021511866,0.85494,0.0003368867,0.0034669589,0.000013841956],"about_ca_topic_score_codex":0.00025029125,"about_ca_topic_score_gemma":0.00039379174,"teacher_disagreement_score":0.0014820286,"about_ca_system_score_codex":0.00020201538,"about_ca_system_score_gemma":0.00008794586,"threshold_uncertainty_score":0.0049579144},"labels":[],"label_agreement":null},{"id":"W4224051649","doi":"10.4049/jimmunol.2101007","title":"Zebrafish CERKL Enhances Host TBK1 Stability and Simultaneously Degrades Viral Protein via Ubiquitination Modulation","year":2022,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China Stem Cell and Translational Research; National Natural Science Foundation of China","keywords":"Biology; Ubiquitin; Zebrafish; Virus; Cell biology; Virology; Gene; Biochemistry","score_opus":0.010369730155491362,"score_gpt":0.22984766677668825,"score_spread":0.21947793662119688,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4224051649","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944587,0.0015651057,0.0020227132,0.00013220208,0.000036600974,0.000019469688,0.00026332878,0.00012103015,0.0013807011],"genre_scores_gemma":[0.9953536,0.0003622941,0.0011550965,0.0000497815,0.000006444273,0.000019332867,0.00021253957,0.000015666386,0.002825346],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999014,0.000009186392,0.000009363486,0.000027434759,0.000020913543,0.000031656935],"domain_scores_gemma":[0.99992394,0.0000044476305,0.000027130129,0.00000782817,0.000011938218,0.000024665798],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000104131475,0.0003334717,0.00024813143,0.00019390008,0.00016815418,0.00020448233,0.00015606552,0.0002521978,0.0014426042],"category_scores_gemma":[0.000088478664,0.00010864446,0.0002677178,0.00007154287,0.00025116355,0.00025439836,0.00022613058,0.00046878608,0.00029057887],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010213582,0.000008521263,0.00013051963,0.00004079151,0.0000029922262,0.000023742388,0.000006214849,0.000027125881,0.9991041,0.00004312442,0.000022292616,0.0004883667],"study_design_scores_gemma":[0.000018777202,0.00016737584,0.0024201889,0.000005168436,0.000014464911,0.00010477498,0.000018686169,0.00053485844,0.99545646,0.000035036297,0.001219623,0.0000046021046],"about_ca_topic_score_codex":0.00070304924,"about_ca_topic_score_gemma":0.0012376851,"teacher_disagreement_score":0.0014426042,"about_ca_system_score_codex":0.00053315336,"about_ca_system_score_gemma":0.00025124595,"threshold_uncertainty_score":0.0048260093},"labels":[],"label_agreement":null},{"id":"W4224227858","doi":"10.1038/s41467-022-29690-x","title":"An anti-influenza A virus microbial metabolite acts by degrading viral endonuclease PA","year":2022,"lang":"en","type":"article","venue":"Nature Communications","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Fundamental Research Funds for the Central Universities; National Key Research and Development Program of China; National Medical Research Council; Chinese Academy of Medical Sciences; National Natural Science Foundation of China","keywords":"Influenza A virus; Biology; Ubiquitin; Microbiology; Metabolite; Proteasome; Virus; Ubiquitin ligase; Virology; Biochemistry; Gene","score_opus":0.016913010251467367,"score_gpt":0.29998658942216555,"score_spread":0.2830735791706982,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4224227858","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9605676,0.012005461,0.02083223,0.00034328699,0.00008646875,0.00011463838,0.00048382196,0.00017449004,0.005392086],"genre_scores_gemma":[0.9828772,0.002888518,0.01155129,0.00012861539,0.000020687847,0.000022408802,0.00037666713,0.00000846463,0.0021260881],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999316,0.000013658755,0.000006102256,0.000014819033,0.000020209332,0.000013623553],"domain_scores_gemma":[0.99994457,0.0000074081954,0.00001855023,0.0000063890416,0.000009191652,0.000013886209],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012865454,0.000305037,0.00015121889,0.0001486161,0.000097364835,0.0002454109,0.00021022759,0.00028807094,0.000865915],"category_scores_gemma":[0.000077922654,0.00008422704,0.00023885189,0.00009283204,0.0001579445,0.00026923878,0.00020525118,0.00039030067,0.00043310542],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000071479466,0.000019457308,0.00024527698,0.000061001072,0.0000060989114,0.0000797113,0.000006765968,0.00011223196,0.9947195,0.00013305916,0.000026377755,0.004519091],"study_design_scores_gemma":[0.000009842409,0.00044094026,0.000749671,0.000004748117,0.0000058382902,0.00040072598,0.000008712228,0.00022480404,0.9953479,0.000040386138,0.002764292,0.0000021678466],"about_ca_topic_score_codex":0.00013191211,"about_ca_topic_score_gemma":0.00024346395,"teacher_disagreement_score":0.000865915,"about_ca_system_score_codex":0.00014886972,"about_ca_system_score_gemma":0.00016495057,"threshold_uncertainty_score":0.0028967261},"labels":[],"label_agreement":null},{"id":"W4224307136","doi":"10.1084/jem.20212427","title":"Life-threatening viral disease in a novel form of autosomal recessive <i>IFNAR2</i> deficiency in the Arctic","year":2022,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Montreal Neurological Institute and Hospital; Montreal General Hospital; Montreal Children's Hospital; McGill University; McGill University Health Centre","funders":"Danmarks Frie Forskningsfond; Novo Nordisk Fonden; Medical Research Council; Novo Nordisk; Aarhus Universitet; Steno Diabetes Center Copenhagen; H. Lundbeck A/S; Syddansk Universitet; Lundbeckfonden; Wellcome Trust; CSL Behring","keywords":"Disease; Genetics; The arctic; Arctic; Biology; Medicine; Internal medicine; Ecology","score_opus":0.01914582950809757,"score_gpt":0.2841327159019369,"score_spread":0.2649868863938393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4224307136","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980773,0.00008393958,0.00061290397,0.000048833703,0.000021272876,0.000014045957,0.00017752597,0.000020463855,0.0009437284],"genre_scores_gemma":[0.99845123,0.000100518846,0.0006092412,0.0000484308,0.000014737297,0.0000048419647,0.00012444615,0.000013836489,0.00063268765],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9997863,0.00003339583,0.00002071598,0.00006555994,0.000039356735,0.000054624637],"domain_scores_gemma":[0.999811,0.00003189693,0.000060091566,0.000013137672,0.000024615054,0.00005921062],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016133967,0.0010483689,0.00032620213,0.00052138796,0.00090081996,0.00039693166,0.00025522144,0.00039385332,0.0012276921],"category_scores_gemma":[0.00042768545,0.00021960803,0.0003852878,0.0003845752,0.00059113454,0.00011067332,0.00039332223,0.0004225353,0.00023089166],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017566101,0.00043286398,0.26338145,0.00017230803,0.00027124514,0.4045411,0.003357728,0.0013682595,0.30799496,0.0019249612,0.0011303325,0.013668209],"study_design_scores_gemma":[0.00007792522,0.0012876497,0.35924798,0.00005855854,0.00023891893,0.5990031,0.0018221111,0.001994448,0.030550368,0.00036468764,0.0052986066,0.000055631983],"about_ca_topic_score_codex":0.021035677,"about_ca_topic_score_gemma":0.020504203,"teacher_disagreement_score":0.021035677,"about_ca_system_score_codex":0.0004823959,"about_ca_system_score_gemma":0.0005848112,"threshold_uncertainty_score":0.041826487},"labels":[],"label_agreement":null},{"id":"W4225383523","doi":"10.1096/fasebj.2022.36.s1.r4278","title":"Efficient Incorporation and Template‐Dependent Polymerase Inhibition are Major Determinants for the Broad‐Spectrum Antiviral Activity of Remdesivir","year":2022,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Virology; RNA polymerase; RNA; Polymerase; RNA-dependent RNA polymerase; Virus; Biology; RNA virus; Coronavirus; Nucleotide; Primer (cosmetics); Chemistry; DNA; Biochemistry; Gene; Coronavirus disease 2019 (COVID-19); Medicine; Infectious disease (medical specialty)","score_opus":0.015062366236627406,"score_gpt":0.24541411737263724,"score_spread":0.23035175113600984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4225383523","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9815778,0.0045145014,0.010524862,0.00008498614,0.0000388034,0.00008281256,0.00046426753,0.00011284418,0.0025989828],"genre_scores_gemma":[0.98844075,0.00129887,0.007575093,0.00005779561,0.000019837706,0.000081899285,0.00089012436,0.000042866242,0.0015928876],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99934906,0.00011614438,0.00009657778,0.00013594267,0.00021291219,0.00008936466],"domain_scores_gemma":[0.99966514,0.00009836945,0.00008780029,0.00004879189,0.000061813465,0.00003804206],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034419005,0.00069791736,0.00059297605,0.00020980707,0.00012462567,0.00061344646,0.0002629406,0.0004430408,0.00074680644],"category_scores_gemma":[0.0005361826,0.00039974606,0.00052497274,0.00016722614,0.00023560037,0.00034102524,0.00022977711,0.0008125617,0.00049872434],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050386858,0.000025479962,0.00014307877,0.000030043499,0.0000067508354,0.000017754408,0.000007914263,0.000092163005,0.99853194,0.000034491353,0.000009059048,0.0010508621],"study_design_scores_gemma":[0.000004812029,0.00010903167,0.0014669598,0.000004334712,0.000009153616,0.00007509419,0.000005108913,0.0005641353,0.9973853,0.000015474012,0.00035682955,0.0000038421076],"about_ca_topic_score_codex":0.00045016108,"about_ca_topic_score_gemma":0.0005967552,"teacher_disagreement_score":0.00074680644,"about_ca_system_score_codex":0.00025538087,"about_ca_system_score_gemma":0.0002714345,"threshold_uncertainty_score":0.0024983287},"labels":[],"label_agreement":null},{"id":"W4225409612","doi":"10.1096/fasebj.2022.36.s1.0r729","title":"Bioinformatics and 3D Structural Analysis of the Coronavirus Main Protease Active Site Diversity","year":2022,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of New Brunswick","funders":"U.S. Department of Energy; National Institutes of Health; National Science Foundation","keywords":"Coronavirus; Protease; Middle East respiratory syndrome coronavirus; Computational biology; Virology; Coronaviridae; Biology; Viral replication; Protein Data Bank (RCSB PDB); Coronavirus disease 2019 (COVID-19); Virus; Medicine; Enzyme; Biochemistry","score_opus":0.016229545507699727,"score_gpt":0.24057517006714343,"score_spread":0.2243456245594437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4225409612","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.74025637,0.0033547995,0.14576913,0.002354105,0.00033275317,0.00057044363,0.07345003,0.01832981,0.01558256],"genre_scores_gemma":[0.76175654,0.0028866518,0.1455889,0.00033322352,0.000060589336,0.0006225964,0.08492567,0.0016472723,0.0021785966],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.999539,0.000086632,0.000034612814,0.00010539217,0.00016859635,0.000065791224],"domain_scores_gemma":[0.9994978,0.00019642786,0.0000552313,0.00005502185,0.0001426644,0.00005279927],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009679561,0.0013467253,0.0013946998,0.0026120401,0.0010946639,0.001794587,0.0012639343,0.0011620501,0.005484698],"category_scores_gemma":[0.0015849167,0.0007583798,0.0028080589,0.002063521,0.00041009372,0.0008744947,0.00073763664,0.0013032387,0.0022499496],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002569431,0.0013861436,0.049381915,0.0035592236,0.0010775414,0.005331071,0.0015576362,0.58537704,0.15024562,0.019663448,0.061411835,0.118439145],"study_design_scores_gemma":[0.00012913608,0.0002001946,0.006997321,0.00007701763,0.00012807468,0.0005392018,0.000307106,0.9623654,0.010334449,0.0034306091,0.015423114,0.000068408655],"about_ca_topic_score_codex":0.008264283,"about_ca_topic_score_gemma":0.011046163,"teacher_disagreement_score":0.008264283,"about_ca_system_score_codex":0.0010311685,"about_ca_system_score_gemma":0.0020069182,"threshold_uncertainty_score":0.018348157},"labels":[],"label_agreement":null},{"id":"W4226025919","doi":"10.1038/s41416-022-01797-4","title":"The STING pathway: Therapeutic vulnerabilities in ovarian cancer","year":2022,"lang":"en","type":"review","venue":"British Journal of Cancer","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Queen's University","funders":"Canadian Institutes of Health Research; Queen's University; Government of Canada","keywords":"Immune system; Ovarian cancer; Cancer research; Tumor microenvironment; Biology; Immunology; Immunotherapy; Interferon; Cancer; Medicine; Genetics","score_opus":0.04738821610387843,"score_gpt":0.3369371907084461,"score_spread":0.28954897460456763,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4226025919","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006487226,0.9983638,0.000063587795,0.00043278563,0.00043415435,0.0000022150061,0.000011632953,0.000005226453,0.0006217423],"genre_scores_gemma":[0.0006189657,0.9974062,0.000115610674,0.00041396482,0.00066838897,0.000005611219,0.000027495318,0.0000015584899,0.00074222387],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99981624,0.000037649323,0.000024177118,0.000030634557,0.00006404365,0.00002733762],"domain_scores_gemma":[0.99959606,0.00020768182,0.00004942449,0.000010556844,0.00008385896,0.00005237365],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007254791,0.00090123806,0.0013748194,0.0013298215,0.00027388326,0.0011986501,0.00069896074,0.0016193975,0.004034949],"category_scores_gemma":[0.0009125241,0.00029579602,0.0003637133,0.0015437213,0.0006331152,0.0012377659,0.0008713773,0.0030340208,0.0022534432],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019415906,0.000071148046,0.00013283941,0.0065893657,0.00005014347,0.00017242994,0.000036486555,0.00036473005,0.0014615146,0.0030896536,0.06484938,0.9229881],"study_design_scores_gemma":[0.000053291,0.00011808308,0.0006600101,0.002048881,0.000063055406,0.0007371302,0.000036235135,0.000099313,0.0002730122,0.0018424046,0.9940532,0.000015354412],"about_ca_topic_score_codex":0.000843563,"about_ca_topic_score_gemma":0.0024118333,"teacher_disagreement_score":0.004034949,"about_ca_system_score_codex":0.0008055162,"about_ca_system_score_gemma":0.0008871128,"threshold_uncertainty_score":0.013498187},"labels":[],"label_agreement":null},{"id":"W4226425030","doi":"10.1055/s-0042-1746208","title":"The Epileptology of Aicardi–Goutières Syndrome: Electroclinical Phenotype and Clinical–Radiological Correlation","year":2022,"lang":"en","type":"article","venue":"Neuropediatrics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Neurological Institute and Hospital","funders":"","keywords":"Medicine; Phenotype; Epilepsy; Neuroscience; Electroencephalography; Clinical phenotype; Pediatrics; Electrophysiology; Psychiatry; Psychology; Genetics; Internal medicine; Biology; Gene","score_opus":0.014049999812308658,"score_gpt":0.26785330142967273,"score_spread":0.2538033016173641,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4226425030","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99873,0.00025716823,0.00016712931,0.000029608365,0.0000045872353,0.0000148582485,0.000049702896,0.00000365863,0.0007432515],"genre_scores_gemma":[0.99948597,0.000104864754,0.00019874798,0.000029974535,0.000012700033,0.000009347624,0.00007465598,0.0000015693362,0.00008212808],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99968624,0.00008459857,0.00006061078,0.0000574965,0.00005286344,0.000058091977],"domain_scores_gemma":[0.99918216,0.00026406508,0.00025023124,0.000059937454,0.000104458035,0.00013909201],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039722826,0.00035806742,0.00028071232,0.0013823148,0.000239635,0.00029979635,0.00018352314,0.00042486435,0.0015110564],"category_scores_gemma":[0.0020315514,0.00012629211,0.00013360972,0.00052749173,0.0004982335,0.00031619205,0.00031878936,0.0002169187,0.0002013095],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024412788,0.000091878836,0.9645309,0.000034008885,0.000024034038,0.019867657,0.00028705332,0.000112098984,0.010407573,0.00013203653,0.00009394436,0.00417459],"study_design_scores_gemma":[0.000031548192,0.0002649735,0.92152905,0.00002084876,0.000019324254,0.07595731,0.00026700745,0.00027752548,0.0010806734,0.00011580343,0.00042694126,0.000009064206],"about_ca_topic_score_codex":0.0008045776,"about_ca_topic_score_gemma":0.00096872455,"teacher_disagreement_score":0.0015110564,"about_ca_system_score_codex":0.00017400112,"about_ca_system_score_gemma":0.00028552802,"threshold_uncertainty_score":0.0050550103},"labels":[],"label_agreement":null},{"id":"W4229000439","doi":"10.3389/fimmu.2022.859749","title":"Discovery and Use of Long dsRNA Mediated RNA Interference to Stimulate Antiviral Protection in Interferon Competent Mammalian Cells","year":2022,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Wilfrid Laurier University","funders":"Natural Sciences and Engineering Research Council of Canada; Wilfrid Laurier University","keywords":"Dicer; RNA silencing; RNA interference; Gene knockdown; Biology; Small interfering RNA; Interferon; Vesicular stomatitis virus; RNA; Cell biology; Gene silencing; Sindbis virus; Transfection; RNA-induced silencing complex; Innate immune system; Virology; Molecular biology; Virus; Cell culture; Immune system; Gene; Genetics","score_opus":0.014516067609803065,"score_gpt":0.2218880099162207,"score_spread":0.20737194230641764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4229000439","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7072974,0.057836298,0.21629447,0.0011908178,0.0005169417,0.0007814387,0.0014673679,0.0010005524,0.01361471],"genre_scores_gemma":[0.88004315,0.018163199,0.093523785,0.00041683784,0.00014734377,0.0004485555,0.0018396459,0.00013202785,0.0052855075],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997124,0.000055361248,0.000036628455,0.000078304816,0.000087938686,0.00002941016],"domain_scores_gemma":[0.9998696,0.00003239649,0.000032951197,0.000021169606,0.000023395105,0.00002058029],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004935283,0.00044335893,0.00042559704,0.00029888027,0.00022484345,0.0005228459,0.00035693063,0.00044467638,0.0005549325],"category_scores_gemma":[0.00019878906,0.0002502593,0.0005337399,0.00015964713,0.00026919926,0.0003640972,0.00024596794,0.00080605096,0.00040724105],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013433245,0.000012082538,0.00003620075,0.000044970235,0.0000030773513,0.000025509791,0.000007452189,0.000036075304,0.99804914,0.0002395821,0.00002094212,0.0015115285],"study_design_scores_gemma":[0.000009324942,0.00021800157,0.00040063122,0.0000061723445,0.000013510715,0.00019500505,0.0000055196992,0.0004205847,0.99403375,0.0000791311,0.0046127657,0.0000056479066],"about_ca_topic_score_codex":0.00008475485,"about_ca_topic_score_gemma":0.00013552918,"teacher_disagreement_score":0.0005549325,"about_ca_system_score_codex":0.0003538447,"about_ca_system_score_gemma":0.0001794804,"threshold_uncertainty_score":0.0026100278},"labels":[],"label_agreement":null},{"id":"W4232849611","doi":"10.1007/978-1-4614-8678-7_194","title":"TBK1 Deficiency","year":2020,"lang":"en","type":"book-chapter","venue":"","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Children's Hospital","funders":"","keywords":"Medicine","score_opus":0.020000873776296578,"score_gpt":0.223175967963765,"score_spread":0.2031750941874684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4232849611","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04729498,0.09064705,0.024653591,0.006999159,0.0037134557,0.000107185886,0.0022850474,0.001709843,0.82258976],"genre_scores_gemma":[0.08994255,0.035642862,0.0071938974,0.0023633535,0.0003970302,0.00009623469,0.0012591179,0.00035724047,0.86274767],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99995685,0.0000044544117,0.000002031995,0.0000120992045,0.000014605161,0.000009888399],"domain_scores_gemma":[0.9999752,0.0000067940346,0.0000030513847,0.0000037139512,0.0000031210366,0.000008076691],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008201046,0.00052453834,0.0002706783,0.00028760495,0.00024630025,0.00054605654,0.00036590855,0.00038939426,0.023269733],"category_scores_gemma":[0.000094495495,0.00013817541,0.00017786263,0.00021414385,0.00036309526,0.00035869644,0.00041864003,0.00085906597,0.0104169715],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00053511513,0.00015268993,0.00082928606,0.00079108926,0.000032828128,0.0040767635,0.00021237995,0.00045794292,0.14616835,0.062253222,0.23975368,0.5447367],"study_design_scores_gemma":[0.000029162786,0.00013389574,0.0022813412,0.00021474731,0.00002291204,0.015762968,0.000072878494,0.0003313204,0.020312402,0.010705807,0.9501153,0.00001730585],"about_ca_topic_score_codex":0.0005730679,"about_ca_topic_score_gemma":0.0008125211,"teacher_disagreement_score":0.023269733,"about_ca_system_score_codex":0.00030246112,"about_ca_system_score_gemma":0.00015905395,"threshold_uncertainty_score":0.07784504},"labels":[],"label_agreement":null},{"id":"W4236150233","doi":"10.1007/978-1-4614-8678-7_198","title":"IRF3 Deficiency","year":2020,"lang":"en","type":"book-chapter","venue":"","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"Political science","score_opus":0.020187307797117145,"score_gpt":0.2233922043783309,"score_spread":0.20320489658121377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236150233","genre_codex":"other","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05791493,0.035287928,0.042837594,0.010240526,0.0035676875,0.00016184084,0.0031177704,0.0022682468,0.8446034],"genre_scores_gemma":[0.09398086,0.015230843,0.013517059,0.003925451,0.00036976903,0.00013956927,0.0015443127,0.00045148027,0.8708406],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99993837,0.00000804658,0.0000023250477,0.000015167954,0.000023235416,0.000012754379],"domain_scores_gemma":[0.9999672,0.00000844063,0.000003704127,0.0000056056356,0.000004270802,0.000010728228],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013373424,0.00053769804,0.00025275315,0.00030535125,0.00027743808,0.00044644176,0.0004151608,0.00051565334,0.030379714],"category_scores_gemma":[0.00010230025,0.00012640767,0.0002564442,0.0002001554,0.00036778866,0.00030235446,0.00040127078,0.0011152161,0.009703036],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048242311,0.00024951424,0.00077401765,0.00040081496,0.000029125873,0.004481525,0.0002017778,0.00035046457,0.20862067,0.071532525,0.23048277,0.48239446],"study_design_scores_gemma":[0.000032492462,0.00018972156,0.0025911331,0.00017015776,0.00002222214,0.018485986,0.00008596753,0.0004089693,0.03201012,0.016001392,0.92997944,0.000022339733],"about_ca_topic_score_codex":0.00050830643,"about_ca_topic_score_gemma":0.00073979155,"teacher_disagreement_score":0.030379714,"about_ca_system_score_codex":0.00027739286,"about_ca_system_score_gemma":0.0001929192,"threshold_uncertainty_score":0.10163027},"labels":[],"label_agreement":null},{"id":"W4237178707","doi":"10.1073/pnas.1300693110","title":"Correction for Zhang et al., TRIM39 regulates cell cycle progression and DNA damage responses via stabilizing p21","year":2013,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Deakin University; Teagasc","keywords":"Zhàng; DNA damage; Cell cycle progression; Cell cycle; DNA; Computational biology; DNA repair; Cell biology; Biology; Chemistry; Genetics; Cell; Political science; Law","score_opus":0.025220295914008286,"score_gpt":0.31179120621786854,"score_spread":0.2865709103038603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237178707","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00028120953,0.0014059094,0.0010517056,0.034675386,0.9596285,0.00002709995,0.0012148564,0.0005121569,0.0012032309],"genre_scores_gemma":[0.028358098,0.010947312,0.0076238923,0.05550143,0.6835846,0.00039486334,0.0069018193,0.0025973173,0.20409074],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967642,0.00038707367,0.0005368758,0.00059803104,0.0012674258,0.00044652054],"domain_scores_gemma":[0.98194605,0.0028699222,0.00084095716,0.0012730594,0.011264476,0.0018054799],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0031748323,0.0022069192,0.0019684013,0.0038663924,0.0024282339,0.0032700081,0.0037533983,0.005474872,0.10052269],"category_scores_gemma":[0.034736935,0.0010830985,0.002392376,0.0018796425,0.0017712978,0.0021353057,0.0020747376,0.007198039,0.035279054],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011301628,0.000011499836,0.00011162931,0.00031153025,0.0000434691,0.0003277806,0.000024885288,0.00004862504,0.0003767928,0.00083483354,0.98892736,0.008868516],"study_design_scores_gemma":[0.00013797585,0.000046601483,0.0022310263,0.00027158656,0.00009939279,0.0015698585,0.00006975199,0.00033963704,0.0012958202,0.0019351483,0.9919452,0.00005798011],"about_ca_topic_score_codex":0.0070846383,"about_ca_topic_score_gemma":0.007638807,"teacher_disagreement_score":0.10052269,"about_ca_system_score_codex":0.0035820706,"about_ca_system_score_gemma":0.0036659422,"threshold_uncertainty_score":0.3362819},"labels":[],"label_agreement":null},{"id":"W4237965765","doi":"10.1158/1538-7445.sabcs18-3854","title":"Abstract 3854: Preclinical characterization of a novel non-cyclic dinucleotide small molecule STING agonist with potent antitumor activity in mice","year":2019,"lang":"en","type":"article","venue":"Experimental and Molecular Therapeutics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trillium Therapeutics (Canada)","funders":"","keywords":"Sting; Stimulator of interferon genes; Innate immune system; Immune system; Agonist; Biology; Medicine; Cancer research; Immunology; Cell biology; Receptor; Internal medicine","score_opus":0.02129384660175684,"score_gpt":0.27429051234084467,"score_spread":0.25299666573908786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237965765","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.986578,0.002102694,0.004660555,0.00020240096,0.00008025136,0.0005137444,0.0019981307,0.00017642214,0.0036878977],"genre_scores_gemma":[0.97712326,0.002896142,0.0047925906,0.00015593876,0.000025085526,0.00062000885,0.004291198,0.000040362178,0.0100556025],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998797,0.000019062372,0.000010199947,0.00002143469,0.000031811745,0.000037707483],"domain_scores_gemma":[0.9999082,0.00001220549,0.000021254598,0.000010879014,0.000012550192,0.00003492924],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002712989,0.0006846299,0.000410434,0.00035285836,0.00012833843,0.0002630943,0.00035706253,0.0005262468,0.0025123274],"category_scores_gemma":[0.00011550722,0.00016600301,0.00033462455,0.0002073589,0.00016697774,0.0003397969,0.000104024395,0.0009988996,0.00075213914],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00090495177,0.0012066927,0.00013786752,0.00009757288,0.000014422297,0.000059180777,0.000025164905,0.00048858736,0.9891824,0.00017387465,0.0003353056,0.0073740506],"study_design_scores_gemma":[0.00040454653,0.01750233,0.0017606879,0.000022587692,0.000059466616,0.00025108445,0.000019615656,0.0014156527,0.9728295,0.000062704166,0.005661321,0.000010486866],"about_ca_topic_score_codex":0.00058485137,"about_ca_topic_score_gemma":0.0009647493,"teacher_disagreement_score":0.0025123274,"about_ca_system_score_codex":0.00032513813,"about_ca_system_score_gemma":0.00036110243,"threshold_uncertainty_score":0.008404613},"labels":[],"label_agreement":null},{"id":"W4238701218","doi":"10.3410/f.738961858.793581496","title":"Faculty Opinions recommendation of The HUSH complex is a gatekeeper of type I interferon through epigenetic regulation of LINE-1s.","year":2020,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network","funders":"","keywords":"Line (geometry); Interferon; Epigenetics; Medicine; Biology; Immunology; Genetics; Mathematics; Gene","score_opus":0.056764206978333974,"score_gpt":0.356874702806755,"score_spread":0.30011049582842103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4238701218","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005088038,0.0002550188,0.00006259352,0.0001726151,0.000033418088,0.0000061068567,0.9979341,0.00018106095,0.0008462601],"genre_scores_gemma":[0.0013757895,0.00014318008,0.00022728635,0.00012769079,0.000012895291,0.000031664695,0.9970438,0.000037643913,0.0010001601],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.998899,0.00020597554,0.0001081277,0.0003690808,0.00026033405,0.000157484],"domain_scores_gemma":[0.99741745,0.00095768267,0.0003916668,0.0004444956,0.00048446035,0.0003042721],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011817366,0.0016818686,0.0014034176,0.0019780432,0.0008810237,0.002508067,0.0020807993,0.0023291283,0.048283692],"category_scores_gemma":[0.006852755,0.0005259068,0.0015790436,0.0035727303,0.0003368367,0.0010438861,0.0014457544,0.001630666,0.051889572],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002748962,0.000038946764,0.005991873,0.0014433417,0.00012992499,0.000044246884,0.00003078223,0.00036310358,0.00033245413,0.0004760687,0.9861426,0.0047317212],"study_design_scores_gemma":[0.00054471014,0.000052086936,0.026201067,0.0007089223,0.00025122907,0.00016185152,0.000094268704,0.0009126708,0.000991703,0.0017978917,0.9682339,0.000049685255],"about_ca_topic_score_codex":0.022480832,"about_ca_topic_score_gemma":0.056746777,"teacher_disagreement_score":0.048283692,"about_ca_system_score_codex":0.001219411,"about_ca_system_score_gemma":0.0023058096,"threshold_uncertainty_score":0.16152507},"labels":[],"label_agreement":null},{"id":"W4238793318","doi":"10.21203/rs.3.rs-20840/v1","title":"Urinary MCP-1 and TWEAK as non-invasive markers of disease activity and treatment response in patients with lupus nephritis in South Africa","year":2020,"lang":"en","type":"preprint","venue":"Research Square","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Health Services","funders":"","keywords":"Lupus nephritis; Urinary system; Medicine; Immunology; Disease; Systemic lupus erythematosus; Internal medicine","score_opus":0.02590324194318556,"score_gpt":0.30003776489654227,"score_spread":0.2741345229533567,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4238793318","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99926025,0.00036473604,0.000048352773,0.000060283066,0.0000048758666,0.000004802961,0.00008163645,0.0000013552518,0.00017362293],"genre_scores_gemma":[0.9997178,0.000106043924,0.000039178412,0.000010957046,0.000005967369,0.00000361243,0.000036367008,7.9530474e-7,0.00007927068],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997218,0.000097294134,0.000025293704,0.000046419424,0.000039569502,0.00006956854],"domain_scores_gemma":[0.9993735,0.00025160544,0.00020538102,0.000019849122,0.000045698867,0.00010395892],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005031531,0.00031972927,0.00045062945,0.00076110277,0.0002887658,0.00072708837,0.00025791395,0.00043186243,0.0007638322],"category_scores_gemma":[0.0029962384,0.00024502628,0.00018854866,0.00088375836,0.00032560527,0.0004420261,0.00029378093,0.00047015885,0.00009177843],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008898418,0.0000645165,0.99166054,0.000055073066,0.00006886649,0.00063468894,0.0008299377,0.000090615446,0.0016455577,0.000040849267,0.00009936407,0.0039200154],"study_design_scores_gemma":[0.000034616063,0.000174787,0.9975101,0.00003036801,0.000053684704,0.0005919341,0.0008163173,0.00026807995,0.00023198462,0.00005565645,0.00022539531,0.0000071209283],"about_ca_topic_score_codex":0.0057955934,"about_ca_topic_score_gemma":0.003856955,"teacher_disagreement_score":0.0057955934,"about_ca_system_score_codex":0.00046317608,"about_ca_system_score_gemma":0.00038554997,"threshold_uncertainty_score":0.011523724},"labels":[],"label_agreement":null},{"id":"W4239661582","doi":"10.4049/jimmunol.2000305","title":"Zebrafish F-box Protein fbxo3 Negatively Regulates Antiviral Response through Promoting K27-Linked Polyubiquitination of the Transcription Factors irf3 and irf7","year":2020,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"IRF7; IRF3; Ubiquitin; Transcription factor; Ubiquitin ligase; Biology; Zebrafish; Cell biology; Cancer research; Virology; Genetics; Gene","score_opus":0.0200036534794316,"score_gpt":0.23843052036436724,"score_spread":0.21842686688493565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239661582","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961228,0.00081517996,0.0018561224,0.000078610254,0.000013777392,0.00000736929,0.00017739608,0.000053967375,0.0008747749],"genre_scores_gemma":[0.99642473,0.00020473616,0.00097071665,0.000033503984,0.0000028474747,0.000009291928,0.00016035876,0.000013079448,0.002180692],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993014,0.000008084897,0.000004628451,0.000016815375,0.000018847384,0.000021487369],"domain_scores_gemma":[0.9999291,0.000008250027,0.00002882562,0.0000057413163,0.000008063358,0.000019940244],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009997702,0.00024883694,0.00013628004,0.0001638692,0.00017770345,0.00015660546,0.00012617717,0.00023640187,0.0012403717],"category_scores_gemma":[0.0000763173,0.00011118264,0.00022887604,0.000051128136,0.00027935125,0.00016748768,0.00017845191,0.0003053559,0.00024705144],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038968006,0.0000030945446,0.00019890736,0.000011718675,0.0000014750672,0.000029935734,0.00000494821,0.0000139639715,0.9994313,0.000035269415,0.000017950386,0.00021243258],"study_design_scores_gemma":[0.0000186557,0.000089357636,0.020593174,0.000008542196,0.000013523705,0.00030820494,0.000047778045,0.001357876,0.975941,0.00007275084,0.0015425517,0.000006736387],"about_ca_topic_score_codex":0.0012650291,"about_ca_topic_score_gemma":0.002090972,"teacher_disagreement_score":0.0012650291,"about_ca_system_score_codex":0.00034450935,"about_ca_system_score_gemma":0.00020845076,"threshold_uncertainty_score":0.004149437},"labels":[],"label_agreement":null},{"id":"W4242253935","doi":"10.1158/1538-7445.transcontrol16-a20","title":"Abstract A20: Baseline IL-17 receptor signaling is essential for controlling aberrant JNK-dependent cellular proliferation via maintenance of endogenous level of ubiquitin-editing enzyme A20","year":2017,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Downregulation and upregulation; Gene knockdown; Biology; Cell growth; Signal transduction; Cancer research; Cell biology; Gene silencing; Small hairpin RNA; Cell culture; Biochemistry; Genetics","score_opus":0.145291793268657,"score_gpt":0.36838736700611296,"score_spread":0.22309557373745598,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4242253935","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98971015,0.0020764114,0.005777887,0.00011737258,0.000049242084,0.000028501987,0.0010892829,0.00017490132,0.0009762709],"genre_scores_gemma":[0.993601,0.0006645148,0.0025957995,0.000062566134,0.000015322668,0.00003471785,0.0011209266,0.000052532636,0.0018525671],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997539,0.000032255197,0.000032279015,0.000075693424,0.00006213594,0.00004375459],"domain_scores_gemma":[0.99977666,0.000018975672,0.000086772336,0.000036025947,0.000024142892,0.00005739503],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001558264,0.00038583527,0.00021631687,0.00021055997,0.00019693306,0.00040482346,0.00020946148,0.00022322664,0.0020055138],"category_scores_gemma":[0.00011697355,0.00013184093,0.0002889823,0.00015342305,0.00025934685,0.00022715855,0.0002599774,0.0004993356,0.00079715106],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000062327286,0.000012247155,0.00017564275,0.000017608947,0.0000032764788,0.0000266563,0.0000038227495,0.000028117101,0.99914217,0.000043692096,0.000021870634,0.00046253286],"study_design_scores_gemma":[0.0000077025925,0.00010654092,0.0023848077,0.0000040372925,0.0000096757285,0.0002606478,0.000012635029,0.00051563553,0.994392,0.000037046175,0.0022657088,0.000003528516],"about_ca_topic_score_codex":0.00038236333,"about_ca_topic_score_gemma":0.00038008267,"teacher_disagreement_score":0.0020055138,"about_ca_system_score_codex":0.0003279249,"about_ca_system_score_gemma":0.00021011096,"threshold_uncertainty_score":0.006709099},"labels":[],"label_agreement":null},{"id":"W4245389858","doi":"10.3410/f.3018960.3188054","title":"Faculty Opinions recommendation of Reconstitution of the RIG-I pathway reveals a signaling role of unanchored polyubiquitin chains in innate immunity.","year":2010,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Innate immune system; Immunity; Cell biology; RIG-I; Communication; Biology; Immunology; Psychology; Immune system","score_opus":0.019425676667961814,"score_gpt":0.3118901429906109,"score_spread":0.2924644663226491,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245389858","genre_codex":"dataset","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0008760678,0.0001599312,0.000075657896,0.00010393768,0.000038770253,0.00001330302,0.9975974,0.00030874647,0.00082617195],"genre_scores_gemma":[0.0011357069,0.00008357344,0.0002426289,0.00004525671,0.000006945023,0.000029935007,0.9977253,0.000034943212,0.0006956123],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99869823,0.0001998586,0.00014407512,0.0003985986,0.00037734708,0.00018183488],"domain_scores_gemma":[0.99739814,0.0007314569,0.0003541344,0.0006061782,0.0005692644,0.0003408384],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012959007,0.0020049862,0.001336243,0.002780457,0.00064724,0.0020585202,0.0019274025,0.0019828142,0.02669579],"category_scores_gemma":[0.006288996,0.0005042814,0.0016433211,0.003988486,0.0003764494,0.0008338046,0.0010908585,0.0016389092,0.029694322],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047076526,0.0000907374,0.0044684648,0.0014221724,0.00019384373,0.00006366043,0.000023359251,0.00067112263,0.00089006184,0.00036350975,0.9850205,0.0063218274],"study_design_scores_gemma":[0.0011322899,0.00010529787,0.033587817,0.00043765502,0.00030505552,0.00019929212,0.00010896536,0.0022847527,0.0034372613,0.0013161437,0.9570198,0.000065555374],"about_ca_topic_score_codex":0.027850628,"about_ca_topic_score_gemma":0.06365213,"teacher_disagreement_score":0.027850628,"about_ca_system_score_codex":0.0014393191,"about_ca_system_score_gemma":0.0030000454,"threshold_uncertainty_score":0.089306295},"labels":[],"label_agreement":null},{"id":"W4245763596","doi":"10.18632/oncotarget.27213","title":"Retraction: DNA-PKCS binding to p53 on the <i>p21WAF1/CIP1</i> promoter blocks transcription resulting in cell death","year":2019,"lang":"en","type":"retraction","venue":"Oncotarget","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Dalhousie University","funders":"","keywords":"Transcription factor; Cancer research; Transcription (linguistics); Cell biology; Programmed cell death; Medicine; Biology; Computational biology; Apoptosis; Genetics; Gene","score_opus":0.027563841523920073,"score_gpt":0.26640402824905995,"score_spread":0.23884018672513987,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245763596","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0041985847,0.0074149435,0.0011671687,0.067340694,0.87795675,0.0001726582,0.001676551,0.0004516384,0.039620996],"genre_scores_gemma":[0.042534444,0.021419413,0.0029014866,0.018926691,0.25070122,0.00031113345,0.004726732,0.0004329389,0.6580458],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990969,0.00010252583,0.00018649142,0.00007701617,0.00038324244,0.00015382352],"domain_scores_gemma":[0.9968988,0.0008650363,0.00022532916,0.00022146541,0.0014004068,0.00038897427],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00089965644,0.0014593196,0.0005966611,0.0018359929,0.0013314437,0.0013918736,0.0014998649,0.0029121714,0.036149204],"category_scores_gemma":[0.0077436604,0.0004652268,0.0006637647,0.0009080354,0.0010702172,0.0009962497,0.0006604601,0.0035790203,0.023525517],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001453697,0.000017843651,0.00016619435,0.00035116068,0.000013052218,0.00095556927,0.000029150095,0.00006874773,0.0019294157,0.0016488421,0.97359663,0.021078039],"study_design_scores_gemma":[0.000042266212,0.00004400997,0.0022634342,0.00016461681,0.000019920108,0.0011305369,0.00004933736,0.00018696951,0.0032287326,0.0007005596,0.9921548,0.0000148592935],"about_ca_topic_score_codex":0.0032285522,"about_ca_topic_score_gemma":0.003938919,"teacher_disagreement_score":0.036149204,"about_ca_system_score_codex":0.0018933546,"about_ca_system_score_gemma":0.0018580509,"threshold_uncertainty_score":0.12093115},"labels":[],"label_agreement":null},{"id":"W4247698062","doi":"10.1016/s1359-6128(03)00314-8","title":"Jacobs secures Canadian Order","year":2003,"lang":"en","type":"article","venue":"Pump Industry Analyst","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Sting; Stimulator of interferon genes; ULK1; Cytokine; Autophagy; Interferon; Phenotype; Signal transduction; Intracellular; Function (biology); Cell biology; Biology; Kinase; Cancer research; Immunology; Protein kinase A; Gene; Immune system; Innate immune system; Genetics","score_opus":0.013545673755878986,"score_gpt":0.24233965937160623,"score_spread":0.22879398561572725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4247698062","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0019500003,0.003127129,0.00031457155,0.005220179,0.002087961,0.000047129943,0.002112517,0.000278135,0.98486245],"genre_scores_gemma":[0.0038142442,0.0013713676,0.00022796688,0.00041654558,0.00008961662,0.000009023988,0.00048105483,0.00008783116,0.9935023],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.999283,0.00003824501,0.000031483858,0.0001793192,0.0003309339,0.00013703459],"domain_scores_gemma":[0.99932146,0.00006510253,0.000033689816,0.000053738713,0.00025158323,0.00027437747],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00034423027,0.0011663418,0.0006425842,0.0016623702,0.004034794,0.0038464866,0.00087424106,0.0023960366,0.8181015],"category_scores_gemma":[0.0012631784,0.00031509876,0.00035647926,0.0017798158,0.0008161215,0.0016508249,0.0026150718,0.0018051071,0.48076484],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030309532,0.000120742385,0.0024708672,0.00035675577,0.000024055937,0.0027794119,0.00041205087,0.0003131035,0.0021493079,0.048938673,0.57190233,0.37022963],"study_design_scores_gemma":[0.000006857129,0.000009456081,0.0006381407,0.00007409225,0.0000020861967,0.00023746584,0.00014605647,0.000049705526,0.00015236721,0.0010504728,0.9976272,0.0000061908836],"about_ca_topic_score_codex":0.047780424,"about_ca_topic_score_gemma":0.114271045,"teacher_disagreement_score":0.8181015,"about_ca_system_score_codex":0.0033587278,"about_ca_system_score_gemma":0.0041375994,"threshold_uncertainty_score":0.25945604},"labels":[],"label_agreement":null},{"id":"W4248272885","doi":"10.3410/f.725335876.793559962","title":"Faculty Opinions recommendation of Mitochondrial DNA stress primes the antiviral innate immune response.","year":2019,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Alberta Innovates; National Institutes of Health; United Mitochondrial Disease Foundation","keywords":"TFAM; Mitochondrial DNA; Biology; Cell biology; Mitochondrion; Nucleoid; Oxidative stress; Transcription factor; Genetics; DNA; Gene; Biochemistry","score_opus":0.02407431051606494,"score_gpt":0.3344945339239048,"score_spread":0.31042022340783987,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4248272885","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00026955854,0.00016646233,0.000033561642,0.00019795679,0.000030533316,0.0000071694203,0.9978416,0.00015117734,0.0013019966],"genre_scores_gemma":[0.0012000807,0.00020188346,0.00024374192,0.00010934401,0.000016775517,0.00005029424,0.99644744,0.00006114942,0.0016692557],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989318,0.00020997545,0.00011921763,0.00030275015,0.00028481646,0.00015144113],"domain_scores_gemma":[0.9964922,0.0012390603,0.0004978142,0.00043729477,0.00082386174,0.0005097902],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009689434,0.0012225622,0.0009751836,0.0030944336,0.00072833354,0.0024603102,0.0014454412,0.0012653731,0.10504682],"category_scores_gemma":[0.008254947,0.0002789608,0.00095667987,0.0051659467,0.00025603035,0.0010720014,0.0015605006,0.0012182328,0.09018798],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008527299,0.000015198561,0.0030295977,0.001427668,0.00006737998,0.000030058045,0.000035965608,0.00016522122,0.00021687805,0.00038403308,0.98961455,0.0049281726],"study_design_scores_gemma":[0.00011568692,0.000014944502,0.009007413,0.00050049985,0.000055317687,0.000046760197,0.00008726954,0.00023253285,0.00031753964,0.0004898446,0.98911625,0.00001596762],"about_ca_topic_score_codex":0.018394994,"about_ca_topic_score_gemma":0.04354478,"teacher_disagreement_score":0.10504682,"about_ca_system_score_codex":0.0012245196,"about_ca_system_score_gemma":0.0026368117,"threshold_uncertainty_score":0.35141665},"labels":[],"label_agreement":null},{"id":"W4248997021","doi":"10.32388/tjwp7n","title":"Gonadotropin-Independent Precocious Puberty","year":2020,"lang":"en","type":"article","venue":"Definitions","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre","funders":"","keywords":"Medicine; McCune–Albright syndrome; Internal medicine; Endocrinology; Ketoconazole; Bone age; Testosterone (patch); Disease; Cyproterone acetate; Precocious puberty; Hormone; Androgen","score_opus":0.06199880570256006,"score_gpt":0.23687324916320657,"score_spread":0.1748744434606465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4248997021","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.29240435,0.23669428,0.049472593,0.024564173,0.008507496,0.00025231406,0.0012165813,0.00033241216,0.3865558],"genre_scores_gemma":[0.91729695,0.0307468,0.004714181,0.0025455838,0.0031363142,0.00009366823,0.0007112864,0.00005459442,0.040700715],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996394,0.00008845154,0.00003621358,0.000071686685,0.00007375743,0.00009044053],"domain_scores_gemma":[0.9995436,0.00017313076,0.000104908315,0.000047825524,0.000049331058,0.00008118903],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042405876,0.00026994434,0.0002484908,0.00092336966,0.0005493221,0.00083174335,0.00051588245,0.0004436143,0.0016578606],"category_scores_gemma":[0.0008016347,0.00007722273,0.0002973441,0.0003993353,0.0017967913,0.00041114082,0.000846218,0.0016783982,0.00043723668],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009296294,0.00031879885,0.023187539,0.0008686802,0.00010034521,0.010924887,0.0016879318,0.00072437664,0.029392757,0.70834506,0.0188594,0.20466068],"study_design_scores_gemma":[0.00010656294,0.00069150556,0.08335412,0.00061914785,0.00009586509,0.046192482,0.0012916288,0.0010598964,0.018499874,0.14155978,0.70646334,0.00006575692],"about_ca_topic_score_codex":0.0010392091,"about_ca_topic_score_gemma":0.0010397265,"teacher_disagreement_score":0.0016578606,"about_ca_system_score_codex":0.00073102536,"about_ca_system_score_gemma":0.000687919,"threshold_uncertainty_score":0.0055461526},"labels":[],"label_agreement":null},{"id":"W4255772842","doi":"10.3410/f.735247658.793559419","title":"Faculty Opinions recommendation of Autophagy induction via STING trafficking is a primordial function of the cGAS pathway.","year":2019,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Sting; Autophagy; Function (biology); Cell biology; Biology; Chemistry; Engineering; Genetics; Aerospace engineering; Apoptosis","score_opus":0.034052267694592554,"score_gpt":0.3243934131801641,"score_spread":0.29034114548557155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255772842","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002644547,0.00027765034,0.00007450755,0.00015845422,0.000045351677,0.0000111570325,0.9979042,0.00031790053,0.00094641617],"genre_scores_gemma":[0.00083244295,0.0001592682,0.00027680764,0.000120843346,0.000014755339,0.000040468727,0.99752516,0.000052282696,0.0009779008],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99820566,0.00030188562,0.00020953588,0.0005935445,0.0004489145,0.00024041765],"domain_scores_gemma":[0.996655,0.0011006936,0.0004378933,0.0007282888,0.0007178793,0.00036016823],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014752657,0.0023360003,0.0017732227,0.0032381325,0.0009644245,0.0031587682,0.0026478814,0.003101849,0.057024006],"category_scores_gemma":[0.009992415,0.00058460893,0.0022117188,0.004743968,0.00038775086,0.0015169529,0.0018838897,0.0018720778,0.07532508],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019455946,0.000034659453,0.002985761,0.0016162135,0.00012861102,0.000038842554,0.000018573837,0.00027809327,0.00028179347,0.00035372504,0.98922324,0.0048458693],"study_design_scores_gemma":[0.00041621306,0.000039415303,0.011192848,0.0007811218,0.00020145587,0.00012789888,0.000062377534,0.0008672896,0.0008134932,0.0016824116,0.9837691,0.000046268262],"about_ca_topic_score_codex":0.023416564,"about_ca_topic_score_gemma":0.05769454,"teacher_disagreement_score":0.057024006,"about_ca_system_score_codex":0.0015653655,"about_ca_system_score_gemma":0.0033606598,"threshold_uncertainty_score":0.19076431},"labels":[],"label_agreement":null},{"id":"W4280495880","doi":"10.1002/jmv.27860","title":"UNC93B1 attenuates the cGAS–STING signaling pathway by targeting STING for autophagy–lysosome degradation","year":2022,"lang":"en","type":"article","venue":"Journal of Medical Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":69,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Sting; IRF3; Cell biology; Autophagy; Innate immune system; Lysosome; Biology; Ectopic expression; Stimulator of interferon genes; Molecular biology; Immunology; Immune system; Cell culture; Biochemistry","score_opus":0.01487147543466756,"score_gpt":0.2606233492169148,"score_spread":0.24575187378224728,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280495880","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917909,0.003323135,0.0024551598,0.00024871965,0.00007861874,0.00002587127,0.00068090286,0.00026124748,0.0011355455],"genre_scores_gemma":[0.9944252,0.0010915598,0.0011312031,0.000092441835,0.000010993198,0.000046518282,0.0007364341,0.000035605393,0.002429967],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981564,0.000026687068,0.000024359875,0.000032715147,0.00004416206,0.00005648122],"domain_scores_gemma":[0.99987423,0.000009738031,0.00004949221,0.0000162704,0.000011532315,0.00003866839],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012770644,0.0005610339,0.00039868275,0.00030207727,0.00022551716,0.00034668364,0.00027561342,0.00037457058,0.0024253526],"category_scores_gemma":[0.00009103041,0.00018973243,0.00036438837,0.0002290507,0.00027649407,0.00021971212,0.00021779595,0.0011259946,0.00064295507],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023704195,0.000043251785,0.000087198205,0.00004252989,0.000007705278,0.000026100077,0.000008693445,0.000040552863,0.9987091,0.00006426018,0.00007065378,0.0006628397],"study_design_scores_gemma":[0.000026763124,0.00028040784,0.0030979724,0.000014017799,0.000022186647,0.0001602512,0.00003522606,0.00064055197,0.99352723,0.000065159074,0.002126044,0.0000042082365],"about_ca_topic_score_codex":0.0007850646,"about_ca_topic_score_gemma":0.0007476456,"teacher_disagreement_score":0.0024253526,"about_ca_system_score_codex":0.0003488453,"about_ca_system_score_gemma":0.00020875626,"threshold_uncertainty_score":0.008113563},"labels":[],"label_agreement":null},{"id":"W4280588204","doi":"10.15252/msb.202110823","title":"Human phospho‐signaling networks of SARS‐CoV‐2 infection are rewired by population genetic variants","year":2022,"lang":"en","type":"article","venue":"Molecular Systems Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Genetics; Population; Virology; Computational biology; Demography","score_opus":0.013283003919540194,"score_gpt":0.251409328277322,"score_spread":0.2381263243577818,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280588204","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987808,0.00012770103,0.00058638735,0.000012769987,0.0000023879704,0.000002049955,0.00020511224,0.000007825098,0.000274892],"genre_scores_gemma":[0.9992537,0.000060591257,0.0002629631,0.00000978887,0.0000027496233,0.0000029429214,0.0002762724,0.0000043083332,0.00012659268],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998828,0.000018980618,0.000007852102,0.000051583844,0.000020014098,0.000018694871],"domain_scores_gemma":[0.9998878,0.000022428652,0.000053415748,0.000011648377,0.000008336009,0.000016322187],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012298262,0.00016884568,0.00016438347,0.00025463762,0.000112290196,0.00017961854,0.00008177384,0.00014775856,0.0009777304],"category_scores_gemma":[0.00024741655,0.00007243011,0.00018158891,0.00026834337,0.00014306752,0.00009560772,0.00010599418,0.0001586102,0.00015836886],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00082196796,0.000053499967,0.1913986,0.000043116408,0.00016650742,0.00059684843,0.00010202292,0.0015669129,0.79114383,0.0006272982,0.00019981367,0.013279619],"study_design_scores_gemma":[0.00001873321,0.0002495397,0.9367759,0.000008138456,0.00009634183,0.0025898616,0.00010633601,0.006005748,0.051642407,0.00081812026,0.0016723716,0.000016509232],"about_ca_topic_score_codex":0.0007264114,"about_ca_topic_score_gemma":0.001072952,"teacher_disagreement_score":0.0009777304,"about_ca_system_score_codex":0.00016993866,"about_ca_system_score_gemma":0.00011775784,"threshold_uncertainty_score":0.0032708049},"labels":[],"label_agreement":null},{"id":"W4280644896","doi":"10.1101/2022.05.18.492546","title":"mRNA-based vaccines against SARS-CoV-2 do not stimulate interferon stimulatory gene expression in individuals affected by Aicardi Goutières Syndrome","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Acuitas Therapeutics (Canada)","funders":"National Center for Advancing Translational Sciences; National Institute of Neurological Disorders and Stroke; Children's Hospital of Philadelphia","keywords":"Interferon; Vaccination; Immunology; Biology; Messenger RNA; Internalization; Virology; Gene; Disease; Gene expression; Interferon gamma; Medicine; Immune system; Cell; Genetics; Internal medicine","score_opus":0.014669680951678966,"score_gpt":0.24364208192480705,"score_spread":0.22897240097312807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280644896","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9994543,0.00008405242,0.0001224022,0.000021955155,0.0000058630026,0.0000063048215,0.000038959388,0.000005550291,0.00026066814],"genre_scores_gemma":[0.9994616,0.00003621052,0.00012634015,0.000050739243,0.000005476949,0.000007727404,0.00009871035,0.0000031470013,0.0002100195],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988675,0.00002665117,0.000010978416,0.000033204564,0.000018624723,0.000023796181],"domain_scores_gemma":[0.9998888,0.0000357421,0.000021532695,0.000012979037,0.000017685845,0.000023328535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012414412,0.00018535632,0.0002455497,0.00014891003,0.00014482398,0.00016785908,0.000050203194,0.00029451007,0.001278769],"category_scores_gemma":[0.00040634972,0.00007460672,0.00016463161,0.00008809207,0.00020257282,0.00008312686,0.000094264025,0.00025401782,0.00018809886],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0033480288,0.0004247877,0.107721694,0.000101632235,0.000053914682,0.004451476,0.00039177752,0.00024873117,0.8645636,0.00013287667,0.00052324974,0.018038314],"study_design_scores_gemma":[0.00026670573,0.012980232,0.846734,0.000036776564,0.00013080357,0.015692733,0.0007173473,0.0021415257,0.11658305,0.00024694868,0.0044487175,0.00002105909],"about_ca_topic_score_codex":0.00042151203,"about_ca_topic_score_gemma":0.0003768252,"teacher_disagreement_score":0.001278769,"about_ca_system_score_codex":0.00013975437,"about_ca_system_score_gemma":0.00006409288,"threshold_uncertainty_score":0.004277885},"labels":[],"label_agreement":null},{"id":"W4281398472","doi":"10.1016/j.celrep.2022.110856","title":"DDX41 is required for cGAS-STING activation against DNA virus infection","year":2022,"lang":"en","type":"article","venue":"Cell Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":83,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saskatchewan Cancer Agency; University of Saskatchewan","funders":"National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; Canada Foundation for Innovation; Canadian Cancer Society; Saskatchewan Health Research Foundation; Cancer Research Society","keywords":"RNA Helicase A; Interferon; DNA; Wild type; Recombinant DNA; Mutant; Biology; Interferon type I; Molecular biology; Helicase; Cell biology; Chemistry; Gene; Virology; RNA; Biochemistry","score_opus":0.020253748708603674,"score_gpt":0.2539626249460172,"score_spread":0.23370887623741352,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4281398472","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972242,0.00065532874,0.0011246789,0.000054110067,0.000019934098,0.000010036005,0.0002947163,0.000071879156,0.0005450157],"genre_scores_gemma":[0.99735403,0.0001619095,0.00066541485,0.000016579628,0.000005125682,0.000012666745,0.00058208907,0.000018260738,0.0011839425],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979764,0.00004209696,0.00003172891,0.00003955518,0.00004913932,0.000039919552],"domain_scores_gemma":[0.9997353,0.000045584326,0.000087841705,0.000035716377,0.000014678045,0.00008089912],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013546097,0.00040466894,0.00029180205,0.00022768092,0.00019643028,0.00036563375,0.0002106363,0.00034928604,0.0019039788],"category_scores_gemma":[0.0001764996,0.00019191288,0.0001991328,0.000104931496,0.00026455824,0.00017549038,0.00031328117,0.00036715265,0.00079063897],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054931486,0.000009509426,0.00019518244,0.0000117072605,0.0000018339242,0.00008750336,0.0000069863263,0.000022464086,0.99927896,0.000041535106,0.000013411859,0.00027596814],"study_design_scores_gemma":[0.0000109196,0.00006768328,0.007998096,0.000005711547,0.0000059312806,0.0006751556,0.000029395775,0.00069384056,0.988912,0.000042135984,0.001555221,0.0000039612414],"about_ca_topic_score_codex":0.00025202567,"about_ca_topic_score_gemma":0.00025257558,"teacher_disagreement_score":0.0019039788,"about_ca_system_score_codex":0.00024204768,"about_ca_system_score_gemma":0.00018187829,"threshold_uncertainty_score":0.0063694715},"labels":[],"label_agreement":null},{"id":"W4281569606","doi":"10.1038/s41467-022-30824-4","title":"Author Correction: scRNA-seq in medulloblastoma shows cellular heterogeneity and lineage expansion support resistance to SHH inhibitor therapy","year":2022,"lang":"en","type":"erratum","venue":"Nature Communications","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research; Hospital for Sick Children","funders":"","keywords":"Medulloblastoma; Lineage (genetic); Resistance (ecology); Biology; Computational biology; Cancer research; Genetics; Gene","score_opus":0.021382445188657284,"score_gpt":0.2996395617231896,"score_spread":0.27825711653453233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4281569606","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00079706573,0.0008819063,0.0032996319,0.043189723,0.9458335,0.000026867701,0.002016136,0.0010584778,0.0028965625],"genre_scores_gemma":[0.056290362,0.009013772,0.027101045,0.12182924,0.25469685,0.00042278116,0.009809528,0.008994666,0.5118418],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99653316,0.0003509235,0.00043491955,0.000520759,0.0019057075,0.0002544559],"domain_scores_gemma":[0.98300123,0.0043957243,0.00094375026,0.0012363006,0.009458565,0.000964492],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003195109,0.0013837868,0.0012759264,0.002175699,0.0025080233,0.0025103302,0.00237038,0.004623666,0.039394397],"category_scores_gemma":[0.03162006,0.0009132826,0.0010552478,0.001276302,0.00174535,0.0012814428,0.0015896775,0.0068931687,0.020563949],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000062315885,0.000007945912,0.00016827554,0.00014593537,0.000019459347,0.0007297464,0.00005180259,0.000089025685,0.00066436565,0.00079034653,0.9895062,0.0077646403],"study_design_scores_gemma":[0.000061118,0.000024922685,0.0010095084,0.00022835654,0.00008054729,0.0019170133,0.00012204059,0.00057974755,0.0039184853,0.0014081787,0.99059486,0.00005532915],"about_ca_topic_score_codex":0.011632615,"about_ca_topic_score_gemma":0.01642042,"teacher_disagreement_score":0.039394397,"about_ca_system_score_codex":0.0028058244,"about_ca_system_score_gemma":0.004390235,"threshold_uncertainty_score":0.13178742},"labels":[],"label_agreement":null},{"id":"W4281710986","doi":"10.1097/shk.0000000000001949","title":"ACTIVATION OF THE MITOCHONDRIAL ANTIVIRAL SIGNALING PROTEIN (MAVS) FOLLOWING LIVER ISCHEMIA/REPERFUSION AND ITS EFFECT ON INFLAMMATION AND INJURY","year":2022,"lang":"en","type":"article","venue":"Shock","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"Canadian Institutes of Health Research","keywords":"Inflammation; Mitophagy; Reperfusion injury; Cell biology; Oxidative stress; Liver injury; Knockout mouse; In vivo; Signal transduction; Gene silencing; Apoptosis; Biology; Immunology; Autophagy; Ischemia; Pharmacology; Medicine; Receptor; Biochemistry; Internal medicine","score_opus":0.006453975514099999,"score_gpt":0.22169682750789632,"score_spread":0.21524285199379634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4281710986","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930587,0.0041812174,0.001764201,0.0001516466,0.000055133147,0.000025643258,0.00018566934,0.000053647407,0.0005241015],"genre_scores_gemma":[0.9965971,0.0011155567,0.0008349403,0.000057804427,0.000019175268,0.000034043846,0.00024492596,0.000007456948,0.001088913],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998933,0.00002067282,0.000011523256,0.000019269943,0.000021519121,0.000033639826],"domain_scores_gemma":[0.999905,0.000008653186,0.000039583618,0.000008143107,0.000013154742,0.000025568563],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017278512,0.00035576135,0.00028659057,0.00017396081,0.0001095745,0.00021892064,0.00011835459,0.00027535285,0.0012059865],"category_scores_gemma":[0.00010183317,0.00008659687,0.00033870342,0.00011061645,0.00022990859,0.00019085556,0.00015401977,0.00040759175,0.0002119973],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005757481,0.000034423334,0.00031945188,0.000068793604,0.000010207388,0.00004408698,0.000012698407,0.000026341713,0.9978276,0.00003935087,0.000032024724,0.0010091866],"study_design_scores_gemma":[0.0000274255,0.0010796621,0.010718728,0.00000999588,0.0000351951,0.00019497705,0.000045008605,0.0004460884,0.9865328,0.000045787023,0.00085959595,0.000004666149],"about_ca_topic_score_codex":0.00016550452,"about_ca_topic_score_gemma":0.00017668364,"teacher_disagreement_score":0.0012059865,"about_ca_system_score_codex":0.00021733546,"about_ca_system_score_gemma":0.00012667953,"threshold_uncertainty_score":0.0040344},"labels":[],"label_agreement":null},{"id":"W4282841240","doi":"10.1101/2022.06.09.495586","title":"SARS-CoV-2 type I Interferon modulation by nonstructural proteins 1 and 2","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"Canadian Institutes of Health Research","keywords":"Chemokine; Interferon; Biology; Virology; Interferon type I; Immune system; CXCL10; Gene; Activator (genetics); In vitro; Virus; Gene expression; Cell biology; Immunology; Genetics","score_opus":0.01513176058589498,"score_gpt":0.23664871868281298,"score_spread":0.22151695809691802,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282841240","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99752325,0.0009937212,0.0005695976,0.000035339825,0.000014022586,0.000016175261,0.0001839942,0.000012874329,0.0006510675],"genre_scores_gemma":[0.9964708,0.0005385483,0.0010733757,0.000061818006,0.00001401061,0.000026169599,0.00053229195,0.000005249216,0.0012776548],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999187,0.000016458338,0.000008793549,0.000016314629,0.000020585856,0.00001909776],"domain_scores_gemma":[0.99995255,0.000006398739,0.00001852971,0.0000053587614,0.000007673459,0.000009633938],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000105207924,0.00034347794,0.00016287007,0.00011849564,0.000073877374,0.00013218308,0.00006622938,0.00013204903,0.0008724901],"category_scores_gemma":[0.000056411576,0.000059337475,0.00021460066,0.00006498465,0.00010833059,0.00012241214,0.0001012773,0.0002584402,0.00020845076],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006575435,0.000009809911,0.0003016191,0.00001727985,0.000001660471,0.00001555816,0.0000033454294,0.000019895073,0.9992398,0.0000145393415,0.000010462113,0.0003002739],"study_design_scores_gemma":[0.000017270846,0.0004782928,0.01669335,0.000008235841,0.000014486934,0.00020473143,0.0000289235,0.00058877096,0.9806434,0.000048711336,0.0012699474,0.0000038744924],"about_ca_topic_score_codex":0.00022812595,"about_ca_topic_score_gemma":0.00034755317,"teacher_disagreement_score":0.0008724901,"about_ca_system_score_codex":0.00015958336,"about_ca_system_score_gemma":0.000121290526,"threshold_uncertainty_score":0.0029187799},"labels":[],"label_agreement":null},{"id":"W4282917118","doi":"10.1158/1538-7445.am2022-124","title":"Abstract 124: PRDX4 links ER-specific redox vulnerability to innate immunity in pancreatic cancer","year":2022,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network","funders":"","keywords":"Innate immune system; Downregulation and upregulation; Biology; Gene knockdown; Cancer research; Cell biology; Programmed cell death; TANK-binding kinase 1; Immunology; Immune system; Apoptosis; Kinase; Protein kinase A; Gene; Genetics","score_opus":0.08050445000509944,"score_gpt":0.39518053068792613,"score_spread":0.3146760806828267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282917118","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95819104,0.024423663,0.005285923,0.0029945665,0.0008701937,0.00009269672,0.0028785614,0.0003266795,0.0049367584],"genre_scores_gemma":[0.9811608,0.0060281097,0.00097146386,0.00033437606,0.00017023638,0.000052292045,0.0021585906,0.000029025574,0.009095237],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998516,0.000027385504,0.000016691736,0.00004047126,0.000034066736,0.000029800995],"domain_scores_gemma":[0.99990034,0.000007316287,0.00003590657,0.000009065652,0.00001809445,0.000029291954],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021670206,0.0004015595,0.00034308585,0.00026736324,0.00020585662,0.00042961616,0.0002677543,0.00042986032,0.007287977],"category_scores_gemma":[0.00013267214,0.00012893419,0.0003766623,0.00028927642,0.00027008154,0.00033957895,0.00037133376,0.00085015816,0.0010651138],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017741246,0.00009874542,0.0028244953,0.0007280222,0.00007066142,0.000519412,0.000038545477,0.00012965169,0.9802878,0.00034984795,0.001970184,0.011208499],"study_design_scores_gemma":[0.0003373505,0.0018445414,0.08290603,0.0001054159,0.00028603082,0.0046778275,0.0002606542,0.0016079702,0.86944467,0.0008185513,0.03768191,0.00002897912],"about_ca_topic_score_codex":0.00014977156,"about_ca_topic_score_gemma":0.00012942556,"teacher_disagreement_score":0.007287977,"about_ca_system_score_codex":0.0002591254,"about_ca_system_score_gemma":0.00018997211,"threshold_uncertainty_score":0.024380744},"labels":[],"label_agreement":null},{"id":"W4282941222","doi":"10.1158/1538-7445.am2022-1877","title":"Abstract 1877: Measurement of cytosolic DNA sensing cGAS-STING pathway functional activity using <i>in vitro</i> phenotypic assay models","year":2022,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Tellabs (Canada)","funders":"","keywords":"Sting; Stimulator of interferon genes; Cancer research; Cancer; Tumor microenvironment; Cancer immunotherapy; Innate immune system; Immune system; Immunotherapy; Medicine; Immune checkpoint; Biology; Interferon; Immunology; Internal medicine","score_opus":0.18466757667624076,"score_gpt":0.34982778327696484,"score_spread":0.16516020660072409,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282941222","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7722758,0.0057472317,0.19247028,0.0005506464,0.00034087303,0.0006930809,0.00902843,0.0016851675,0.017208407],"genre_scores_gemma":[0.87767535,0.00419563,0.0859829,0.00030413773,0.00007363483,0.0011559069,0.012511917,0.0003071325,0.017793259],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990023,0.000323494,0.00009575066,0.00017870708,0.00028652628,0.000113285896],"domain_scores_gemma":[0.999582,0.00009969009,0.00010763065,0.00005744792,0.0001031612,0.000050060444],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056859624,0.0011831005,0.00032201043,0.0005966136,0.00024540644,0.0004175822,0.00044327127,0.00059337466,0.0029295566],"category_scores_gemma":[0.0004298136,0.00023354699,0.00043516944,0.000791329,0.00024117094,0.0003447937,0.00024571715,0.0009638687,0.0014834214],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008415249,0.00007366375,0.00017399077,0.00006536007,0.000008642092,0.00002141792,0.000018920853,0.00016001884,0.99725074,0.00008102025,0.00015212128,0.0019099574],"study_design_scores_gemma":[0.000005756902,0.00019637392,0.0009165307,0.00000552426,0.000013209073,0.000042674026,0.000013274829,0.00097598764,0.9967078,0.000028597276,0.00108905,0.0000053150616],"about_ca_topic_score_codex":0.00089349586,"about_ca_topic_score_gemma":0.0009965564,"teacher_disagreement_score":0.0029295566,"about_ca_system_score_codex":0.00038829463,"about_ca_system_score_gemma":0.00028454425,"threshold_uncertainty_score":0.0098003745},"labels":[],"label_agreement":null},{"id":"W4282961803","doi":"10.1158/1538-7445.am2022-5734","title":"Abstract 5734: The effect of PRAME on retinoid response and cell proliferation in cutaneous and head and neck squamous cell carcinoma","year":2022,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Cancer research; Head and neck squamous-cell carcinoma; Retinoid; Cell growth; Cell culture; Biology; Cell; Cell cycle; Cancer; Medicine; Internal medicine; Retinoic acid; Head and neck cancer","score_opus":0.02076201019566685,"score_gpt":0.3204493167109208,"score_spread":0.29968730651525394,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282961803","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9878076,0.005177861,0.0010901057,0.00020670715,0.00012861095,0.00008995049,0.0014045112,0.00009829864,0.00399634],"genre_scores_gemma":[0.9841644,0.0020495406,0.0015502617,0.00011938874,0.000027130516,0.00009890324,0.0018876357,0.000021362132,0.010081451],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998312,0.000024067676,0.000019593454,0.000035663095,0.000051146104,0.00003836077],"domain_scores_gemma":[0.9999206,0.000016941025,0.000009926769,0.000013965453,0.000019735284,0.000018846018],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013771816,0.0002154053,0.00041183652,0.0003816361,0.00025495392,0.0002564178,0.00022389296,0.00033357984,0.005754804],"category_scores_gemma":[0.00012598696,0.00013577094,0.0004558307,0.0002877498,0.0001895572,0.00019712675,0.00016791816,0.00070528185,0.0010376025],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038764422,0.00012236368,0.00044539222,0.0000833185,0.000011792736,0.00006486957,0.000017241839,0.000050733877,0.9952899,0.000045987483,0.00023187371,0.0032488392],"study_design_scores_gemma":[0.000059877606,0.0013499117,0.016586691,0.000013360677,0.000047620862,0.0002928859,0.00007348261,0.00060798065,0.97584015,0.000031450145,0.005088388,0.000008168574],"about_ca_topic_score_codex":0.0012289709,"about_ca_topic_score_gemma":0.0016867507,"teacher_disagreement_score":0.005754804,"about_ca_system_score_codex":0.00019891761,"about_ca_system_score_gemma":0.00029621794,"threshold_uncertainty_score":0.019251704},"labels":[],"label_agreement":null},{"id":"W4282965447","doi":"10.1158/1538-7445.am2022-5704","title":"Abstract 5704: IDH2 mutation reduce radiotherapy induced immune response in glioblastoma by affecting micronucleus formation","year":2022,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"IDH2; Cancer research; Biology; DNA methylation; Isocitrate dehydrogenase; Mutation; Immune checkpoint; Immune system; Cell biology; Genetics; IDH1; Immunotherapy; Gene; Gene expression","score_opus":0.038377167971960155,"score_gpt":0.37037218617803014,"score_spread":0.33199501820606997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282965447","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931652,0.0021875766,0.0009865029,0.00018297542,0.00012357156,0.00005224904,0.0007111235,0.0001434712,0.0024472375],"genre_scores_gemma":[0.99161714,0.0007991613,0.0011409518,0.000117758325,0.000017220185,0.00006437406,0.00072140736,0.00002743639,0.0054945336],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999136,0.000010967001,0.000009548499,0.000013929627,0.00002965222,0.000022339313],"domain_scores_gemma":[0.9999535,0.0000039414535,0.000012654748,0.0000047839453,0.0000067016786,0.000018394298],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008083587,0.00030663662,0.00037512503,0.00025996848,0.00009483998,0.00014924137,0.00020427674,0.00030637975,0.004418569],"category_scores_gemma":[0.00006223426,0.00009225155,0.00018097494,0.00013944048,0.00015322803,0.00009542647,0.00016508858,0.00057485903,0.0005208307],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00065537205,0.0001472893,0.000276753,0.000064055464,0.000012433491,0.00003366982,0.000008042094,0.00007950376,0.9958807,0.00007211015,0.00020949967,0.0025605028],"study_design_scores_gemma":[0.00008632631,0.0028536548,0.004590181,0.000010698103,0.000032242868,0.00020693464,0.000025811101,0.00047007934,0.9890031,0.000046095614,0.0026701896,0.0000046239875],"about_ca_topic_score_codex":0.00078792,"about_ca_topic_score_gemma":0.0011661312,"teacher_disagreement_score":0.004418569,"about_ca_system_score_codex":0.00025425988,"about_ca_system_score_gemma":0.00022359175,"threshold_uncertainty_score":0.014781654},"labels":[],"label_agreement":null},{"id":"W4283760832","doi":"10.1101/2022.06.27.497846","title":"PTEN and BRCA1 tumor suppressor loss associated tumor immune microenvironment exhibits differential response to therapeutic STING pathway activation in a murine model of ovarian cancer","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Kingston Health Sciences Centre; University of Calgary; Queen's University","funders":"Canadian Institutes of Health Research; Queen's University","keywords":"PTEN; Cancer research; Tumor microenvironment; Biology; Ovarian cancer; Cancer; PI3K/AKT/mTOR pathway; Apoptosis","score_opus":0.014271401018110162,"score_gpt":0.22313087237748302,"score_spread":0.20885947135937286,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283760832","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985354,0.00022317622,0.0005933056,0.000025235753,0.000007628569,0.000017786755,0.0002616423,0.000027187934,0.00030863297],"genre_scores_gemma":[0.9977089,0.0002000773,0.0007076106,0.000019989602,0.000003433785,0.000036137473,0.00036636172,0.000005891814,0.0009515243],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999892,0.000016069385,0.000008134084,0.000023222685,0.000027295038,0.000033295717],"domain_scores_gemma":[0.9999074,0.000011342266,0.00002862668,0.000012201115,0.000005873799,0.000034614943],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000105974366,0.00022932187,0.00015345876,0.00038883582,0.00009176381,0.00016824367,0.000104238876,0.0001839427,0.0008734234],"category_scores_gemma":[0.00006181656,0.00012782852,0.00017196084,0.00013634164,0.00017419668,0.000107337895,0.000110147324,0.00043192558,0.00014251989],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023799785,0.000074718344,0.00059672503,0.0000136077415,0.0000030901654,0.00003152741,0.000013182046,0.00008045157,0.9984291,0.00003089463,0.000018960036,0.0004696142],"study_design_scores_gemma":[0.000027889433,0.0017599495,0.013184619,0.0000035607957,0.000017326736,0.00027035968,0.00004379012,0.001426501,0.9824294,0.000040630388,0.0007926857,0.000003247278],"about_ca_topic_score_codex":0.00042442107,"about_ca_topic_score_gemma":0.00067698193,"teacher_disagreement_score":0.0008734234,"about_ca_system_score_codex":0.00022348581,"about_ca_system_score_gemma":0.00013337078,"threshold_uncertainty_score":0.0029218793},"labels":[],"label_agreement":null},{"id":"W4283764033","doi":"10.3389/fimmu.2022.941579","title":"African Swine Fever Virus Structural Protein p17 Inhibits cGAS-STING Signaling Pathway Through Interacting With STING","year":2022,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Jiangsu Agricultural Science and Technology Independent Innovation Fund; National Key Research and Development Program of China; Priority Academic Program Development of Jiangsu Higher Education Institutions; National Natural Science Foundation of China","keywords":"Sting; African swine fever virus; TANK-binding kinase 1; IRF3; Biology; Virus; Innate immune system; Virology; Cell biology; Stimulator of interferon genes; Signal transduction; Immune system; Immunology","score_opus":0.011010498587593889,"score_gpt":0.22291725664980427,"score_spread":0.21190675806221038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283764033","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98912036,0.0055898568,0.0025896989,0.00019401524,0.00007523208,0.000025713032,0.00020843839,0.000078131976,0.002118495],"genre_scores_gemma":[0.9933989,0.0029770117,0.0010829096,0.00008432715,0.000028595152,0.000042341333,0.0005363614,0.000012269287,0.0018372822],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998858,0.000022994669,0.000008748476,0.0000145489075,0.000025106921,0.000042775526],"domain_scores_gemma":[0.99994504,0.00000827539,0.000016111195,0.000004723177,0.0000068954814,0.000018920566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013467597,0.000325932,0.00021774489,0.00014846824,0.00017705145,0.00022151734,0.0001428174,0.00019850135,0.0011748469],"category_scores_gemma":[0.00010071755,0.00009277292,0.0003505674,0.00009501641,0.00022477227,0.0001652475,0.00017186234,0.00044708588,0.0003501222],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039787035,0.000067237605,0.000726065,0.00016284037,0.000018822657,0.0001340043,0.000022556664,0.00011376355,0.99492043,0.0001839541,0.00022584916,0.0030265278],"study_design_scores_gemma":[0.000072652125,0.0005471697,0.012247094,0.000027049291,0.00004490008,0.00052735535,0.00006748513,0.0022729605,0.9755152,0.00016277813,0.008508991,0.000006398477],"about_ca_topic_score_codex":0.0003372732,"about_ca_topic_score_gemma":0.00037527594,"teacher_disagreement_score":0.0011748469,"about_ca_system_score_codex":0.0002124044,"about_ca_system_score_gemma":0.00026932094,"threshold_uncertainty_score":0.003930211},"labels":[],"label_agreement":null},{"id":"W4283784323","doi":"10.4049/jimmunol.2101212","title":"The Porcine and Chicken Innate DNA Sensing cGAS-STING-IRF Signaling Axes Exhibit Differential Species Specificity","year":2022,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Innovative Research Group Project of the National Natural Science Foundation of China","keywords":"Sting; Biology; Stimulator of interferon genes; Innate immune system; Cell biology; Interferon; Signal transduction; Molecular biology; Immune system; Immunology","score_opus":0.014417372254981627,"score_gpt":0.21996849192738363,"score_spread":0.205551119672402,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283784323","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937709,0.0009781641,0.002239342,0.00007632297,0.000027808872,0.000017669197,0.0004027021,0.0000413593,0.0024457192],"genre_scores_gemma":[0.99287814,0.00035760907,0.0027502656,0.00013171697,0.000009066067,0.000033316097,0.0007887538,0.000023221595,0.0030278412],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983585,0.000017311588,0.000012890892,0.000057547022,0.00002406414,0.000052359945],"domain_scores_gemma":[0.9999156,0.000013151858,0.000026206078,0.000009315761,0.0000098413575,0.000025804566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012360337,0.00023418674,0.00014412952,0.00023660231,0.00013036342,0.00022803264,0.00012825475,0.00028865406,0.001222981],"category_scores_gemma":[0.00009135869,0.00017659723,0.0003927776,0.000081607686,0.00023607392,0.00023790053,0.0002250736,0.00057858677,0.0003014429],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009293851,0.000006319824,0.00055335043,0.000025955995,0.0000031198874,0.00004626053,0.00002977706,0.000018651663,0.9983323,0.00009737681,0.000020581285,0.0007732968],"study_design_scores_gemma":[0.00003321198,0.00043845508,0.08877713,0.000025970321,0.000052791576,0.0012488017,0.00033302617,0.001542996,0.900297,0.00017487796,0.0070521245,0.000023624698],"about_ca_topic_score_codex":0.00057219196,"about_ca_topic_score_gemma":0.0008870334,"teacher_disagreement_score":0.001222981,"about_ca_system_score_codex":0.00022350563,"about_ca_system_score_gemma":0.00013308114,"threshold_uncertainty_score":0.004091263},"labels":[],"label_agreement":null},{"id":"W4284880594","doi":"10.1101/2022.07.07.499132","title":"Regulation of TRIB1 abundance in hepatoma models","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Heart Research Centre; University of Ottawa","funders":"","keywords":"Proteasome; Downregulation and upregulation; Ubiquitin; Cell biology; Biology; Biochemistry; Gene","score_opus":0.016688249313689382,"score_gpt":0.22606946052824012,"score_spread":0.20938121121455072,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4284880594","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99338925,0.0008363795,0.0035750582,0.0000522875,0.00003776554,0.00010754114,0.00062276906,0.0001643724,0.0012146756],"genre_scores_gemma":[0.9915876,0.0007262715,0.0023942767,0.000032992553,0.0000093405915,0.0001644755,0.0010526553,0.00003641256,0.0039959564],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997582,0.00004788417,0.000031169882,0.000049906517,0.00005935001,0.000053445863],"domain_scores_gemma":[0.99973327,0.000049795548,0.000058439844,0.000042856744,0.00005398816,0.00006172819],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024362185,0.0003348275,0.0002865102,0.0005006178,0.00023319677,0.00040054787,0.00014542733,0.0001880949,0.0015101315],"category_scores_gemma":[0.00016488125,0.000116981915,0.00024581296,0.00029833394,0.00021218174,0.0002028347,0.00024238092,0.00063300866,0.00049071375],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030013398,0.00009361207,0.00037109377,0.000031410946,0.0000055893065,0.00006287251,0.000029490919,0.00006943978,0.9979639,0.000048151163,0.000045578043,0.0009787813],"study_design_scores_gemma":[0.00001689603,0.0007541992,0.002512177,0.0000026349103,0.00002137719,0.00019017448,0.00005394971,0.00070194586,0.9945022,0.000023981374,0.0012153604,0.0000051101583],"about_ca_topic_score_codex":0.0006703141,"about_ca_topic_score_gemma":0.0008605541,"teacher_disagreement_score":0.0015101315,"about_ca_system_score_codex":0.00034181605,"about_ca_system_score_gemma":0.00014312728,"threshold_uncertainty_score":0.005051911},"labels":[],"label_agreement":null},{"id":"W4285391095","doi":"10.1038/s41588-022-01113-z","title":"Genetic regulation of OAS1 nonsense-mediated decay underlies association with COVID-19 hospitalization in patients of European and African ancestries","year":2022,"lang":"en","type":"article","venue":"Nature Genetics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":138,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto General Hospital; University Health Network","funders":"Division of Cancer Epidemiology and Genetics, National Cancer Institute; National Center for Advancing Translational Sciences; National Institute of Neurological Disorders and Stroke; National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; Oxford Nanopore Technologies; Weill Cornell Medical College; National Institute on Aging; Center for Clinical and Translational Science, University of Alabama at Birmingham; Emory Medical Care Foundation; Deutsche Forschungsgemeinschaft; Massachusetts Consortium on Pathogen Readiness; National Human Genome Research Institute; Hellenic Foundation for Research and Innovation; Universidade de São Paulo; European Commission; Seoul National University Bundang Hospital; Wayne and Gladys Valley Foundation; University of Alabama at Birmingham; Kaiser Permanente; University of Alabama; National Cancer Institute; U.S. Department of Health and Human Services; Genomic Health; Emory University; Frederick National Laboratory for Cancer Research; National Institutes of Health; Robert Wood Johnson Foundation; Ellison Medical Foundation","keywords":"Biology; Haplotype; Locus (genetics); Allele; Genetics; Genome-wide association study; Single-nucleotide polymorphism; Nonsense-mediated decay; Disease; Gene; RNA splicing; Genotype; Medicine; RNA; Internal medicine","score_opus":0.006092664110982121,"score_gpt":0.21982983738184025,"score_spread":0.21373717327085814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285391095","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9994331,0.00008537571,0.00022310477,0.000026856922,0.000004271941,0.0000024194198,0.00008612849,0.0000031799884,0.00013548724],"genre_scores_gemma":[0.99958795,0.00002602063,0.00014790669,0.000013718749,0.000005153891,0.000002439746,0.00010036886,0.0000033242368,0.0001130413],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997603,0.000060494,0.000029921523,0.000088755296,0.000024049179,0.000036442125],"domain_scores_gemma":[0.9996086,0.000096924734,0.00018186409,0.00003280897,0.000018319355,0.00006157885],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024543382,0.0002960243,0.0002530005,0.00044243984,0.00028272084,0.00027767094,0.00016760734,0.00031433936,0.0032773959],"category_scores_gemma":[0.00073727896,0.000110186505,0.00040696785,0.00041032463,0.00023724612,0.00011694086,0.0002059259,0.00032206907,0.00019092108],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016255317,0.00007616294,0.94425625,0.000029124976,0.00023017847,0.001074933,0.00022610433,0.0001443228,0.045878235,0.00020811596,0.0001830174,0.00606806],"study_design_scores_gemma":[0.000029545834,0.00019345288,0.994622,0.000008709287,0.00008809348,0.002011652,0.00013406991,0.0006203511,0.0018127112,0.00014217195,0.000330496,0.0000067051647],"about_ca_topic_score_codex":0.0008857568,"about_ca_topic_score_gemma":0.0008825626,"teacher_disagreement_score":0.0032773959,"about_ca_system_score_codex":0.00010984514,"about_ca_system_score_gemma":0.00010114642,"threshold_uncertainty_score":0.010963976},"labels":[],"label_agreement":null},{"id":"W4285672705","doi":"10.1158/2326-6066.723.8.6","title":"A Sampling of Highlights from the Literature","year":2020,"lang":"en","type":"article","venue":"Cancer Immunology Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Sampling (signal processing); Medicine; Computer science; Computational biology; Biology","score_opus":0.09914347380315007,"score_gpt":0.3762141187227381,"score_spread":0.277070644919588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285672705","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0009317316,0.9113708,0.0012436329,0.027497217,0.033460215,0.00009565439,0.0017462117,0.00028109056,0.023373524],"genre_scores_gemma":[0.0033520488,0.9312043,0.0015255836,0.016359936,0.029866425,0.000111292284,0.0025863661,0.00012158206,0.014872442],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99923325,0.000112287446,0.00014484725,0.00013224815,0.00027159898,0.00010577472],"domain_scores_gemma":[0.99602145,0.0015624914,0.0004520587,0.000103583654,0.0013549395,0.0005056434],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0014390443,0.0010422852,0.0010665837,0.011997828,0.0007507825,0.0035285938,0.00131498,0.0018559555,0.046206754],"category_scores_gemma":[0.00668217,0.00038062202,0.0011562213,0.009888288,0.000609709,0.00333348,0.0018640662,0.0022204923,0.01880074],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001132808,0.000039740353,0.00040294422,0.010346272,0.000055905643,0.00038464137,0.00012282415,0.00014723079,0.0004938139,0.0022348345,0.47860858,0.50705],"study_design_scores_gemma":[0.000008499814,0.000024885632,0.0005492621,0.005772853,0.00004029157,0.0007490241,0.00012122399,0.000030420142,0.00010371824,0.0009085203,0.99167717,0.00001420576],"about_ca_topic_score_codex":0.0016172873,"about_ca_topic_score_gemma":0.0037827452,"teacher_disagreement_score":0.9537932,"about_ca_system_score_codex":0.0017394928,"about_ca_system_score_gemma":0.0030789904,"threshold_uncertainty_score":0.15457696},"labels":[],"label_agreement":null},{"id":"W4286671453","doi":"10.1002/jmv.28018","title":"Interplay between cellular metabolism and DNA viruses","year":2022,"lang":"en","type":"review","venue":"Journal of Medical Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Glutaminolysis; Pentose phosphate pathway; Catabolism; Biology; Metabolic pathway; Glycolysis; Metabolism; Biochemistry; Biosynthesis; Intracellular; DNA; Amino acid; Nucleotide; Gene","score_opus":0.04898167571680112,"score_gpt":0.3631783898472752,"score_spread":0.31419671413047406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4286671453","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016712354,0.9986926,0.00009899259,0.0001655362,0.00018914367,0.0000018466403,0.00000743403,0.00000479611,0.00067243923],"genre_scores_gemma":[0.0010605013,0.997795,0.00011952625,0.000121194265,0.000217288,0.0000042461575,0.000019680712,0.0000010785585,0.00066144875],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998932,0.00002257377,0.000013711062,0.000019026558,0.00003706109,0.000014391286],"domain_scores_gemma":[0.99990904,0.000038608418,0.000012855936,0.0000033232343,0.000024412595,0.000011651491],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025210812,0.0006384985,0.0010244694,0.001321783,0.00023391112,0.0008837812,0.00047961142,0.0009324076,0.002056153],"category_scores_gemma":[0.0002688658,0.00020677569,0.00030090625,0.0011395947,0.0003181709,0.0009215052,0.00057206355,0.001280218,0.0012945542],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010152592,0.00006123477,0.00021087738,0.011979352,0.00007323853,0.00038998522,0.000078888224,0.00052021316,0.006859352,0.005913952,0.02448362,0.9493277],"study_design_scores_gemma":[0.000011231764,0.0000996544,0.00095521356,0.0018787383,0.000059952603,0.0020326183,0.00005723784,0.00012434214,0.0014741527,0.0027721713,0.99051625,0.000018396206],"about_ca_topic_score_codex":0.0005628448,"about_ca_topic_score_gemma":0.0007794422,"teacher_disagreement_score":0.002056153,"about_ca_system_score_codex":0.0005827022,"about_ca_system_score_gemma":0.0005977953,"threshold_uncertainty_score":0.006878495},"labels":[],"label_agreement":null},{"id":"W4287838589","doi":"10.1073/pnas.2204539119","title":"SARS-CoV-2 impairs interferon production via NSP2-induced repression of mRNA translation","year":2022,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill Genome Centre; University of Ottawa; University of Alberta; Children's Hospital of Eastern Ontario; McGill University; Christie (Canada); University of Manitoba; Princess Margaret Cancer Centre; University of Toronto; University Health Network","funders":"Biotechnology and Biological Sciences Research Council; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; China Scholarship Council; Queen's University; Directorate for Biological Sciences; Terry Fox Research Institute; National Research Foundation of Korea; Canada Excellence Research Chairs, Government of Canada; UK Research and Innovation; National Research Foundation; Queen's University Belfast; Government of Canada; Princess Margaret Cancer Foundation","keywords":"Innate immune system; Messenger RNA; Translation (biology); Interferon; Biology; Cell biology; Psychological repression; Immune system; Virology; RNA; Protein biosynthesis; microRNA; Viral replication; Mechanism (biology); Cytokine; Virus; Immunology; Gene expression; Molecular biology; Gene; Genetics","score_opus":0.06632425264555622,"score_gpt":0.3247269218442627,"score_spread":0.25840266919870647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4287838589","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973483,0.00034043836,0.0007068303,0.00005275506,0.000029921212,0.00001751433,0.00031898613,0.000048913913,0.0011362288],"genre_scores_gemma":[0.99447316,0.00031029587,0.0012075049,0.000047014837,0.000009258582,0.00003967475,0.0007026695,0.000019213214,0.0031911572],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998517,0.00003386732,0.000018087841,0.000023454422,0.00003723452,0.000035703128],"domain_scores_gemma":[0.9999168,0.000015343096,0.000023264114,0.000012085193,0.0000060377897,0.000026495809],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001389233,0.00044149486,0.00027448736,0.00015615142,0.00010215704,0.00023037072,0.00015805538,0.00026352963,0.0014046222],"category_scores_gemma":[0.00008322148,0.0001402689,0.0002106371,0.00008335276,0.00022563632,0.00015966312,0.00016717338,0.00060134684,0.00035069423],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000872577,0.000035141336,0.000058990863,0.00000989136,0.0000021081923,0.000022745236,0.0000037147438,0.000038466376,0.99950016,0.00003964631,0.000015762707,0.00018600264],"study_design_scores_gemma":[0.000023193637,0.0003836241,0.0024862208,0.000003654818,0.0000044187805,0.00012332383,0.000016743297,0.0009535527,0.99520725,0.000033838587,0.00076117326,0.0000030892338],"about_ca_topic_score_codex":0.00035818765,"about_ca_topic_score_gemma":0.0005089554,"teacher_disagreement_score":0.0014046222,"about_ca_system_score_codex":0.00022012038,"about_ca_system_score_gemma":0.00017882153,"threshold_uncertainty_score":0.0046988726},"labels":[],"label_agreement":null},{"id":"W4287958392","doi":"10.1093/molbev/msac160","title":"Comparative Genomics of the Waterfowl Innate Immune System","year":2022,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Innate immune system; Gene; Genetics; Genome; Immune system; Genomics; Comparative genomics","score_opus":0.007322302331361575,"score_gpt":0.23347309747693562,"score_spread":0.22615079514557404,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4287958392","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99675864,0.00065418,0.001440651,0.00003209918,0.00000283366,0.0000053448657,0.0003796888,0.000010647492,0.00071586797],"genre_scores_gemma":[0.995468,0.00042521826,0.0023969277,0.000059093356,0.000009550455,0.000017881828,0.0011112281,0.000008466609,0.0005035787],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999174,0.000015325777,0.0000037513114,0.000035098587,0.000013366743,0.000015081281],"domain_scores_gemma":[0.999907,0.000025694428,0.000026474434,0.000005522107,0.000016227696,0.000019125733],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012438229,0.00013759965,0.0001758646,0.00046236793,0.00020974486,0.00024453455,0.00016153179,0.00023674403,0.00055316923],"category_scores_gemma":[0.00014446469,0.000075896285,0.00019702039,0.00042264725,0.00017149549,0.00023915316,0.00018564709,0.0001995972,0.000083216],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001786941,0.000038428916,0.030527798,0.0001309042,0.00010923393,0.00013351507,0.00042776155,0.00076802657,0.9508983,0.00047010268,0.00009252986,0.016224684],"study_design_scores_gemma":[0.000007985391,0.00022026799,0.9823068,0.000016558522,0.000058167334,0.00036796945,0.00023404401,0.0017635275,0.012285838,0.00038098733,0.002344328,0.00001356683],"about_ca_topic_score_codex":0.002079004,"about_ca_topic_score_gemma":0.0019715033,"teacher_disagreement_score":0.002079004,"about_ca_system_score_codex":0.00026840885,"about_ca_system_score_gemma":0.00016194927,"threshold_uncertainty_score":0.0041338205},"labels":[],"label_agreement":null},{"id":"W4288068654","doi":"10.1038/s41467-022-32156-9","title":"Author Correction: Whole-genome profiling of nasopharyngeal carcinoma reveals viral-host co-operation in inflammatory NF-κB activation and immune escape","year":2022,"lang":"en","type":"erratum","venue":"Nature Communications","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Ontario Institute for Cancer Research; University of Toronto; Princess Margaret Cancer Centre; University Health Network","funders":"","keywords":"Nasopharyngeal carcinoma; Immune system; Genome; Host (biology); Viral infection; NF-κB; Computational biology; NFKB1; Biology; Gene expression profiling; Virology; Inflammatory response; Inflammation; Immunology; Genetics; Medicine; Virus; Gene; Gene expression; Transcription factor","score_opus":0.01582104411578127,"score_gpt":0.28624845654504316,"score_spread":0.2704274124292619,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4288068654","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00034797483,0.0009460304,0.0013969387,0.033063542,0.96084815,0.000027234617,0.0011853302,0.00061926973,0.0015655396],"genre_scores_gemma":[0.060725793,0.012424756,0.012498519,0.110492274,0.5300403,0.00041459064,0.0074042925,0.004177118,0.26182234],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9945787,0.0006914972,0.0007742503,0.0011167714,0.0022738953,0.00056483876],"domain_scores_gemma":[0.97307,0.0057249344,0.0014217461,0.0018587478,0.016371746,0.001552748],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004117462,0.0019180989,0.0020870056,0.0025088238,0.0023617933,0.0033390152,0.004500321,0.0059980922,0.07359547],"category_scores_gemma":[0.06297403,0.00091396034,0.0020684465,0.0017583208,0.002243405,0.0022609658,0.002181015,0.0089749135,0.032475624],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060737802,0.000005720475,0.00018622655,0.00021033439,0.00002421676,0.00055420934,0.00006530923,0.00006706009,0.00018323101,0.0007297078,0.99181515,0.006098216],"study_design_scores_gemma":[0.00009980496,0.000037162066,0.0015194482,0.0005562635,0.0000927219,0.0027861067,0.00026042544,0.0006397323,0.0013115887,0.0024148978,0.99019885,0.00008312917],"about_ca_topic_score_codex":0.0091957,"about_ca_topic_score_gemma":0.011230505,"teacher_disagreement_score":0.07359547,"about_ca_system_score_codex":0.0031667121,"about_ca_system_score_gemma":0.005806982,"threshold_uncertainty_score":0.24620134},"labels":[],"label_agreement":null},{"id":"W4288695423","doi":"10.1101/2022.07.28.501948","title":"The porcine cGAS-STING pathway exerts an unusual antiviral function independent of IFN and autophagy","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Priority Academic Program Development of Jiangsu Higher Education Institutions; Yangzhou University; Government of Jiangsu Province; National Natural Science Foundation of China","keywords":"Sting; IRF3; Autophagy; Interferon; Stimulator of interferon genes; Innate immune system; Mutant; Biology; Apoptosis; TANK-binding kinase 1; Virus; ULK1; Cell biology; Virology; Immune system; Signal transduction; Immunology; Gene; Biochemistry","score_opus":0.011764185900832226,"score_gpt":0.21952691726536655,"score_spread":0.20776273136453433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4288695423","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99582064,0.0011548189,0.0015896867,0.000046765883,0.000016022983,0.00000954312,0.00024145612,0.00003576563,0.0010852348],"genre_scores_gemma":[0.9973673,0.00034772878,0.0010763544,0.00002933781,0.000005144384,0.000008278914,0.0004252603,0.0000062676413,0.0007342813],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99994063,0.0000106849975,0.000006323308,0.000011427974,0.000011631298,0.00001924661],"domain_scores_gemma":[0.99995923,0.000004933056,0.00001550013,0.000006586695,0.0000033520107,0.000010422028],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000074313546,0.00021225822,0.00014579485,0.00013543422,0.00009250092,0.00015664428,0.000100301404,0.00018037303,0.00057725835],"category_scores_gemma":[0.00004187998,0.00007035222,0.00026756802,0.00007150487,0.00016360411,0.00015920705,0.00013542829,0.00026090012,0.00019377735],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000579435,0.000004565988,0.00020266726,0.000017466156,0.0000015091505,0.000043280586,0.000003267998,0.00003160577,0.9991911,0.00004574324,0.000011286756,0.00038955538],"study_design_scores_gemma":[0.000009538964,0.0003372327,0.009705834,0.000009554387,0.000012391233,0.0008711914,0.0000340382,0.0011107875,0.9852702,0.00011615962,0.0025176299,0.0000054939846],"about_ca_topic_score_codex":0.00020358687,"about_ca_topic_score_gemma":0.0002970899,"teacher_disagreement_score":0.00057725835,"about_ca_system_score_codex":0.00014515317,"about_ca_system_score_gemma":0.00011793955,"threshold_uncertainty_score":0.0019311905},"labels":[],"label_agreement":null},{"id":"W4289261665","doi":"10.1073/pnas.2119514119","title":"CFI-402257, a TTK inhibitor, effectively suppresses hepatocellular carcinoma","year":2022,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"National Natural Science Foundation of China; University of Hong Kong; Croucher Foundation","keywords":"Cancer research; Immune checkpoint; Immune system; Hepatocellular carcinoma; CD8; Biology; Cancer cell; FOXP3; DNA damage; Cancer; Cytotoxic T cell; Immunology; Immunotherapy; Medicine; Internal medicine; DNA; Biochemistry; In vitro","score_opus":0.02713576843884086,"score_gpt":0.26858001358325556,"score_spread":0.2414442451444147,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4289261665","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99183524,0.0045848754,0.0009767035,0.00013548789,0.00005783414,0.000075749434,0.00019164926,0.00014797422,0.001994495],"genre_scores_gemma":[0.9942472,0.0028413716,0.00067061995,0.000102562,0.000027242706,0.00006378358,0.00032233054,0.000012531602,0.0017123092],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999473,0.000008053422,0.0000058726005,0.000007640353,0.000012658025,0.00001850902],"domain_scores_gemma":[0.9999629,0.0000063114653,0.000007875674,0.0000038834596,0.000004223975,0.000014806613],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010605119,0.00044561137,0.0004048331,0.00028566088,0.00010206794,0.00013217589,0.00015611852,0.00020926785,0.00073482987],"category_scores_gemma":[0.00006552141,0.00008793949,0.0002000066,0.00015724948,0.00014751487,0.00014215561,0.000113560614,0.00044571655,0.00014149769],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00081581285,0.00048616232,0.000384124,0.0001859185,0.000028335333,0.00016574157,0.00002362404,0.00044496718,0.98002464,0.0001452255,0.0003620536,0.016933354],"study_design_scores_gemma":[0.0005645791,0.009325961,0.0062431414,0.000024903331,0.00011844141,0.0007389356,0.00003398954,0.0029188646,0.9732093,0.000081152124,0.0067234156,0.000017320455],"about_ca_topic_score_codex":0.00061611517,"about_ca_topic_score_gemma":0.00097386056,"teacher_disagreement_score":0.00073482987,"about_ca_system_score_codex":0.00021281226,"about_ca_system_score_gemma":0.0003121929,"threshold_uncertainty_score":0.0024582744},"labels":[],"label_agreement":null},{"id":"W4289774638","doi":"10.1128/mbio.02064-22","title":"Genistein Targets STING-Driven Antiviral Responses","year":2022,"lang":"en","type":"article","venue":"mBio","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Health and Medical Research Council; Australian Research Council; Fonds de Recherche du Québec - Santé; Fonds de recherche du Québec; Department of Education and Training","keywords":"Sting; Genistein; Stimulator of interferon genes; Interferon; Biology; Signal transduction; Cell biology; Pharmacology; Virology; Biochemistry; Innate immune system; Receptor; Genetics","score_opus":0.015177513748088685,"score_gpt":0.24685573528661667,"score_spread":0.231678221538528,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4289774638","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98244864,0.0052813874,0.0050193705,0.00021035974,0.00007948359,0.00007004469,0.0006587942,0.00018205987,0.0060497527],"genre_scores_gemma":[0.9932429,0.0018267711,0.0016820973,0.00006462007,0.000021066078,0.000025639381,0.00045213514,0.000016319918,0.0026684154],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988925,0.000021967076,0.0000062169574,0.000023288801,0.000023455907,0.0000357996],"domain_scores_gemma":[0.99994457,0.0000148431845,0.000013073481,0.0000072721446,0.0000074846353,0.000012711678],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000106765016,0.0004024267,0.00024006834,0.000227733,0.00013659944,0.00026055335,0.00013576433,0.00029437698,0.0013937703],"category_scores_gemma":[0.00008888212,0.00006417165,0.0001928289,0.00009194583,0.00014683536,0.00015601626,0.00014911137,0.00053437316,0.0005013071],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007881351,0.000011317817,0.000070154565,0.000025478399,0.0000018050108,0.0000176136,0.000004648465,0.000032747503,0.9988231,0.00004407019,0.000017340808,0.0008729228],"study_design_scores_gemma":[0.0000054714487,0.00018993531,0.0016039533,0.000004685324,0.000005160284,0.00007469115,0.000011370661,0.00023233774,0.99604416,0.000036931066,0.0017898878,0.0000015292749],"about_ca_topic_score_codex":0.00024935018,"about_ca_topic_score_gemma":0.00074169703,"teacher_disagreement_score":0.0013937703,"about_ca_system_score_codex":0.00031636874,"about_ca_system_score_gemma":0.00021809229,"threshold_uncertainty_score":0.004662633},"labels":[],"label_agreement":null},{"id":"W4291006623","doi":"10.1371/journal.ppat.1010718","title":"Viral-mediated activation and inhibition of programmed cell death","year":2022,"lang":"en","type":"review","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"University of Guelph; Cancer Research Institute","keywords":"Pyroptosis; Necroptosis; Programmed cell death; Biology; Viral pathogenesis; Viral replication; Apoptosis; Virus; Immunity; Intracellular; Autophagy; Virology; Cell biology; Immune system; Immunology; Genetics","score_opus":0.049639264028254484,"score_gpt":0.2756812271891689,"score_spread":0.2260419631609144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4291006623","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00026764732,0.996804,0.00024524165,0.00011170074,0.00022485032,0.000007650631,0.000037573715,0.0000139669,0.0022873548],"genre_scores_gemma":[0.001360916,0.9969217,0.00021575706,0.00010445396,0.00013545465,0.000011349896,0.00006528836,0.0000025241038,0.0011825071],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998821,0.000015786729,0.000014109573,0.000022463459,0.000049783444,0.000015790447],"domain_scores_gemma":[0.9999151,0.000031045063,0.000015600437,0.000003945928,0.000022457174,0.000011815729],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028096643,0.00074242824,0.000868707,0.0018178237,0.0001978372,0.0007506347,0.0005441717,0.00061034795,0.0026931048],"category_scores_gemma":[0.0002638162,0.00022403497,0.00032085666,0.0012866356,0.00030613653,0.0007989468,0.00055270933,0.0011511534,0.0023878897],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007760469,0.000063010746,0.00016159343,0.016220935,0.00006671517,0.00026409444,0.00007330401,0.00043259142,0.012767766,0.0069542406,0.026249968,0.9366683],"study_design_scores_gemma":[0.000009612564,0.00008008182,0.00066470914,0.0013886181,0.00004045713,0.001132571,0.00002721105,0.00007108531,0.0023223772,0.0014256898,0.992823,0.000014605057],"about_ca_topic_score_codex":0.000408983,"about_ca_topic_score_gemma":0.0005732559,"teacher_disagreement_score":0.0026931048,"about_ca_system_score_codex":0.00042652205,"about_ca_system_score_gemma":0.00046795234,"threshold_uncertainty_score":0.009009361},"labels":[],"label_agreement":null},{"id":"W4293103790","doi":"10.4049/jimmunol.2100983","title":"Zebrafish sirt5 Negatively Regulates Antiviral Innate Immunity by Attenuating Phosphorylation and Ubiquitination of mavs","year":2022,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Zebrafish; Ubiquitin; Innate immune system; Biology; Cell biology; Phosphorylation; Gene; Receptor; Genetics","score_opus":0.009097567964768068,"score_gpt":0.22962021654814313,"score_spread":0.22052264858337506,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293103790","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9911488,0.0020703769,0.0038142316,0.00017501162,0.00006262761,0.00001654563,0.00040057657,0.00016938023,0.0021424547],"genre_scores_gemma":[0.9945399,0.00038261228,0.0012827205,0.000069633235,0.0000073049896,0.000012422093,0.0002543391,0.000016335167,0.0034346373],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998795,0.000011454443,0.000008748771,0.00003204785,0.000038379014,0.000029948898],"domain_scores_gemma":[0.9999285,0.000003910452,0.000029620636,0.0000057348675,0.00000959818,0.00002263672],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000104823994,0.00039057576,0.00018983593,0.00026658765,0.00018201917,0.00018632771,0.00023424636,0.00031011723,0.0017743811],"category_scores_gemma":[0.00008235246,0.0001414819,0.00034127504,0.00007661941,0.0003084204,0.00021003984,0.0002163977,0.00040424365,0.00030474574],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005642564,0.000004899103,0.00029899992,0.000025161884,0.000003716053,0.000028313372,0.000006925447,0.000031315933,0.9989222,0.000095265634,0.000035289795,0.0004915031],"study_design_scores_gemma":[0.000024801138,0.00018396846,0.0126963,0.000009399832,0.00003447039,0.0001841561,0.000043722936,0.0013266676,0.9821801,0.000084723884,0.003221765,0.000010024762],"about_ca_topic_score_codex":0.0015112594,"about_ca_topic_score_gemma":0.003208413,"teacher_disagreement_score":0.0017743811,"about_ca_system_score_codex":0.0005115577,"about_ca_system_score_gemma":0.00022529537,"threshold_uncertainty_score":0.0059358478},"labels":[],"label_agreement":null},{"id":"W4293145363","doi":"10.1158/1078-0432.1319.11.3","title":"Transcriptional Profiling Identifies Gene Expression Changes Associated with IFN-α Tolerance in Hepatitis C–Related Hepatocellular Carcinoma Cells","year":2005,"lang":"en","type":"article","venue":"Clinical Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Hepatocellular carcinoma; Hepatitis C virus; Biology; Gene expression; Gene expression profiling; DNA microarray; Cell culture; Microarray; Hepatitis B virus; Gene; Microarray analysis techniques; Interferon; Fold change; Virology; Cancer research; Cytotoxic T cell; Molecular biology; Virus; Genetics; In vitro","score_opus":0.09923167277216344,"score_gpt":0.38477752177957,"score_spread":0.28554584900740654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293145363","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947127,0.0008962587,0.0020162957,0.00005911704,0.000016892598,0.000033283763,0.0013942583,0.00003346448,0.00083776575],"genre_scores_gemma":[0.9918445,0.0007215508,0.0021180583,0.00007879119,0.000015002554,0.00008926994,0.003251898,0.000013079184,0.0018678015],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999859,0.000016567934,0.000012059604,0.00004088397,0.00004387749,0.000027626356],"domain_scores_gemma":[0.9999019,0.000017124092,0.00002467676,0.000011542471,0.000027995306,0.000016691845],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000114240735,0.00019502557,0.00028177013,0.0003747674,0.0002186311,0.0003205781,0.000104202896,0.00018260133,0.0009783566],"category_scores_gemma":[0.00013503396,0.00009553627,0.00022966565,0.00058630947,0.00017691983,0.00012202243,0.00015220854,0.00031615284,0.00044889847],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016448105,0.000024633848,0.0021421288,0.00003387794,0.0000057362076,0.000030911473,0.000030714295,0.000039776904,0.9966079,0.000025886831,0.000028895349,0.00086517446],"study_design_scores_gemma":[0.00002161506,0.00044567315,0.23783176,0.000017990646,0.00006584025,0.00035658476,0.0004139798,0.003141572,0.75517416,0.00012190593,0.0023926161,0.000016407042],"about_ca_topic_score_codex":0.0005485875,"about_ca_topic_score_gemma":0.0006774579,"teacher_disagreement_score":0.0009783566,"about_ca_system_score_codex":0.0002373975,"about_ca_system_score_gemma":0.0002117979,"threshold_uncertainty_score":0.003272891},"labels":[],"label_agreement":null},{"id":"W4293210987","doi":"10.1002/1873-3468.14476","title":"<scp>ISGylation</scp> directly modifies hypoxia‐inducible factor‐2α and enhances its polysome association","year":2022,"lang":"en","type":"article","venue":"FEBS Letters","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"ISG15; Polysome; Cell biology; Transcription factor; Regulator; Hypoxia-inducible factors; Biology; Interferon; Ubiquitin; Transcriptional regulation; Messenger RNA; Translation (biology); Hypoxia (environmental); Regulation of gene expression; Chemistry; Gene; Ribosome; RNA; Immunology; Biochemistry","score_opus":0.013952812954410018,"score_gpt":0.22459752672834707,"score_spread":0.21064471377393706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293210987","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9813307,0.0022103775,0.004123258,0.00061398174,0.00016975336,0.000034194207,0.0006534063,0.00021077425,0.010653645],"genre_scores_gemma":[0.9916163,0.00041670713,0.0017156032,0.00017663144,0.00003498732,0.000015087232,0.0010749084,0.000071764945,0.004878104],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991226,0.000018085559,0.0000052053033,0.000021677846,0.00001830356,0.000024389657],"domain_scores_gemma":[0.9999101,0.000015080136,0.00002610718,0.000019978277,0.0000087759145,0.000019883923],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001358735,0.00030381687,0.00019543529,0.00012511565,0.00022225482,0.00021828493,0.00014746311,0.00019823655,0.004869344],"category_scores_gemma":[0.00010039747,0.00008776422,0.0002090387,0.00018647434,0.0003328241,0.00014882826,0.00017605972,0.00043965262,0.00081120356],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019234853,0.000011734769,0.00016117675,0.000033920594,0.000007597874,0.00007420819,0.000007313713,0.00008551808,0.9972881,0.0002873374,0.00022450044,0.0016262077],"study_design_scores_gemma":[0.000012693879,0.00010629418,0.0035018374,0.0000047346475,0.0000045339743,0.00018778372,0.000008015532,0.00027357257,0.9919849,0.00008842293,0.0038247975,0.0000025345785],"about_ca_topic_score_codex":0.0008688498,"about_ca_topic_score_gemma":0.0010549573,"teacher_disagreement_score":0.004869344,"about_ca_system_score_codex":0.0004085248,"about_ca_system_score_gemma":0.00017708725,"threshold_uncertainty_score":0.016289592},"labels":[],"label_agreement":null},{"id":"W4294011913","doi":"10.1101/2022.08.31.505975","title":"Cleavage of 14-3-3ε by the enteroviral 3C protease dampens RIG-I mediated antiviral signaling","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; University of Regina","keywords":"MDA5; RIG-I; Biology; Cell biology; Innate immune system; Picornavirus; Proteases; RNA; Immunoprecipitation; Interferon; Cleavage (geology); Signal transduction; Messenger RNA; RNA interference; Virology; Receptor; Gene; Biochemistry; Enzyme","score_opus":0.011069057328515883,"score_gpt":0.21882820351913487,"score_spread":0.207759146190619,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4294011913","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99497163,0.0012514844,0.0024914753,0.0001083696,0.000034619767,0.000017311624,0.00020138519,0.00004838502,0.0008752321],"genre_scores_gemma":[0.9978115,0.00024050314,0.0010358955,0.00008317766,0.0000053594486,0.000010505125,0.00021928319,0.000011210902,0.00058256957],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997875,0.000036396716,0.000021480473,0.00003349909,0.000050374492,0.0000707514],"domain_scores_gemma":[0.99980706,0.000031129963,0.000060386963,0.000027290169,0.000023880148,0.000050286108],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002129919,0.00038507098,0.00026064404,0.00014600882,0.00013621637,0.00044136823,0.00015882631,0.00035126662,0.0013716709],"category_scores_gemma":[0.00021513272,0.00013880465,0.0004112245,0.000087495486,0.0003568182,0.00023665601,0.00026977915,0.0007954036,0.00049087306],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015499887,0.000021662801,0.00022396103,0.00002005267,0.0000065188656,0.00004219275,0.0000066260773,0.000045850444,0.9988973,0.000058156344,0.000028105118,0.00049457856],"study_design_scores_gemma":[0.000019849667,0.0001977316,0.0072675454,0.000011377299,0.000010835195,0.00043397592,0.000031196032,0.0014563506,0.9892123,0.00010324931,0.0012499292,0.00000578097],"about_ca_topic_score_codex":0.00043081492,"about_ca_topic_score_gemma":0.00043434245,"teacher_disagreement_score":0.0013716709,"about_ca_system_score_codex":0.00036004063,"about_ca_system_score_gemma":0.0002327656,"threshold_uncertainty_score":0.004588723},"labels":[],"label_agreement":null},{"id":"W4294904723","doi":"10.1096/fj.202200473r","title":"Pirh2 restricts influenza A virus replication by modulating short‐chain ubiquitination of its nucleoprotein","year":2022,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Fundamental Research Funds for the Central Universities; Canadian Institutes of Health Research; Priority Academic Program Development of Jiangsu Higher Education Institutions; Natural Sciences and Engineering Research Council of Canada; National Natural Science Foundation of China","keywords":"Nucleoprotein; Ubiquitin; Ribonucleoprotein; Influenza A virus; Gene knockdown; Biology; Ubiquitin ligase; Viral replication; Small interfering RNA; Virology; Lysine; Virus; Cell biology; RNA; Gene; Genetics; Amino acid","score_opus":0.02540226609853688,"score_gpt":0.27414037896459276,"score_spread":0.24873811286605588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4294904723","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931484,0.0017598844,0.0018959627,0.00010378853,0.00004958621,0.00002380139,0.00035430607,0.00013118348,0.0025329976],"genre_scores_gemma":[0.9953695,0.0005231263,0.0011840148,0.000053682834,0.000015311414,0.000023636863,0.0006413934,0.000020225161,0.0021690892],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998671,0.000014163855,0.000014713225,0.000039153965,0.000030358793,0.000034584144],"domain_scores_gemma":[0.9999225,0.00001059665,0.00001593047,0.000011590781,0.000008972546,0.000030426247],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012152543,0.00026624653,0.0002600037,0.00012487273,0.0001639891,0.00033707006,0.00020020826,0.00019918958,0.0010663961],"category_scores_gemma":[0.00010115444,0.00016474987,0.00024148042,0.00009505339,0.00019478955,0.00016188998,0.00024428032,0.0003764758,0.00039141256],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010615677,0.000027507738,0.00033358362,0.00003745443,0.000006942057,0.00003884403,0.00000789074,0.000043021977,0.9983298,0.00006673269,0.00006526079,0.00093681325],"study_design_scores_gemma":[0.000026366399,0.00024798306,0.004230075,0.0000032929674,0.000019310059,0.00019806337,0.000025504645,0.0017047707,0.98959154,0.000042632477,0.0039048723,0.0000055456094],"about_ca_topic_score_codex":0.00035643217,"about_ca_topic_score_gemma":0.00055113225,"teacher_disagreement_score":0.0010663961,"about_ca_system_score_codex":0.00022587525,"about_ca_system_score_gemma":0.00019627545,"threshold_uncertainty_score":0.0035673976},"labels":[],"label_agreement":null},{"id":"W4294917672","doi":"10.1128/jvi.00776-22","title":"Avian Influenza NS1 Proteins Inhibit Human, but Not Duck, RIG-I Ubiquitination and Interferon Signaling","year":2022,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Government of Canada; American Lebanese Syrian Associated Charities","keywords":"Biology; Influenza A virus subtype H5N1; Waterfowl; Virology; Population; Interferon; Influenza A virus; Ubiquitin; RIG-I; Virus; Immunology; Ecology; Genetics; Innate immune system; Gene; Immune system; Environmental health","score_opus":0.0199486526829586,"score_gpt":0.27051329006719144,"score_spread":0.25056463738423285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4294917672","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935002,0.0024907168,0.00090798916,0.00009287767,0.000028673057,0.000015674214,0.00018620025,0.000021732869,0.0027559916],"genre_scores_gemma":[0.9970776,0.00061002834,0.00066458073,0.00006548816,0.000004454044,0.0000107286105,0.00021443436,0.0000048083425,0.0013479505],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998636,0.000032991877,0.0000134721395,0.000020870713,0.000028956725,0.000040086197],"domain_scores_gemma":[0.9999397,0.000013119554,0.000017735763,0.000009007707,0.000008050651,0.000012280729],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014515911,0.00028351092,0.00018296226,0.00007107672,0.0001374014,0.00021144461,0.00012137928,0.00018565914,0.001086923],"category_scores_gemma":[0.00009069985,0.00007644534,0.00020215161,0.000044537923,0.0001739089,0.00010745885,0.00010249993,0.00028298298,0.00033743258],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015343653,0.000035452587,0.00046343807,0.000051647447,0.000009305131,0.00001558493,0.00000952824,0.00008841927,0.99760747,0.000076005716,0.00007203197,0.0014176717],"study_design_scores_gemma":[0.00002178597,0.00047429424,0.010141177,0.000009370101,0.000013396014,0.00024877858,0.00004211231,0.0008896385,0.98579025,0.000043905453,0.0023216098,0.0000037020593],"about_ca_topic_score_codex":0.00078455906,"about_ca_topic_score_gemma":0.0017363928,"teacher_disagreement_score":0.001086923,"about_ca_system_score_codex":0.0002614579,"about_ca_system_score_gemma":0.00020430365,"threshold_uncertainty_score":0.0036361217},"labels":[],"label_agreement":null},{"id":"W4295694337","doi":"10.3389/fimmu.2022.1030812","title":"Editorial: Type III interferons: Emerging roles beyond antiviral barrier defense","year":2022,"lang":"en","type":"editorial","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; College of Medicine, University of Florida; Canadian Institutes of Health Research; Agence Nationale de la Recherche; University of Manitoba; Research Manitoba; University of Florida","keywords":"Immunology; Immunity; Medicine; Immune system","score_opus":0.004700061053645178,"score_gpt":0.23618468113997138,"score_spread":0.2314846200863262,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4295694337","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000034562436,0.003920999,0.00011617485,0.023979913,0.9702378,0.000023115157,0.00004129503,0.000037965492,0.001608258],"genre_scores_gemma":[0.00027389117,0.0022472346,0.000061347426,0.013540028,0.97708297,0.000022998966,0.000022043472,0.000019260791,0.0067301923],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99574924,0.000804648,0.0003825533,0.00062746624,0.0020354586,0.00040058696],"domain_scores_gemma":[0.98854584,0.0036892677,0.00092807936,0.00026632965,0.003692161,0.0028782508],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0072694705,0.005624694,0.0039044395,0.0033064303,0.0032191498,0.008335909,0.003570765,0.01817728,0.02078312],"category_scores_gemma":[0.015594206,0.0013388946,0.002895532,0.0010602428,0.00252563,0.004821638,0.0022694406,0.018027509,0.012937152],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057413337,0.000014139068,0.00002346766,0.0001599813,0.00001558108,0.00012573671,0.00000791454,0.000022195245,0.00009551125,0.00021626939,0.9955146,0.0037471398],"study_design_scores_gemma":[0.00012368688,0.000046010922,0.0003142282,0.0003890101,0.000071373965,0.00034489224,0.00004185448,0.00020450146,0.00016470201,0.0016564406,0.99661607,0.000027246793],"about_ca_topic_score_codex":0.0009930261,"about_ca_topic_score_gemma":0.0028153292,"teacher_disagreement_score":0.02078312,"about_ca_system_score_codex":0.0032984023,"about_ca_system_score_gemma":0.0028331992,"threshold_uncertainty_score":0.06952649},"labels":[],"label_agreement":null},{"id":"W4296106211","doi":"10.3390/v14092029","title":"Role of RNA Polymerase II Promoter-Proximal Pausing in Viral Transcription","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; RNA polymerase II; Transcription (linguistics); RNA polymerase; Virology; Polymerase; RNA; Virus; Viral replication; Chromatin; Promoter; Gene; Cell biology; Gene expression; Genetics","score_opus":0.048376767954315406,"score_gpt":0.30840718471110806,"score_spread":0.26003041675679267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296106211","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000121695855,0.99812216,0.00015518922,0.00012716536,0.00026614987,0.0000029861171,0.000013135533,0.000006657056,0.0011848425],"genre_scores_gemma":[0.0006320426,0.99826884,0.00014560616,0.000105495514,0.00018769572,0.000005350687,0.000027860857,0.0000016260263,0.00062542],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999031,0.000013013207,0.0000142597,0.000022612754,0.000032251795,0.000014619538],"domain_scores_gemma":[0.99989104,0.000046231326,0.000017816747,0.0000032969363,0.00002772326,0.000013856522],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003180605,0.00073050824,0.0009342257,0.0012233817,0.00023485687,0.00084182573,0.0005965261,0.0007695591,0.0022255545],"category_scores_gemma":[0.00028022405,0.00026416077,0.00028958765,0.0013015444,0.0003799905,0.001050557,0.00056116894,0.0013252313,0.002526447],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007731495,0.000038259666,0.00015930325,0.013830415,0.00004109974,0.00024403715,0.00006883516,0.00048229858,0.0066551054,0.004844706,0.020083677,0.953475],"study_design_scores_gemma":[0.000008983895,0.000069906775,0.0005907927,0.001559397,0.00004441071,0.0009221234,0.00003968434,0.00008597188,0.001271914,0.001749142,0.9936422,0.000015395162],"about_ca_topic_score_codex":0.00055410585,"about_ca_topic_score_gemma":0.0008615296,"teacher_disagreement_score":0.0022255545,"about_ca_system_score_codex":0.0005912089,"about_ca_system_score_gemma":0.0007382878,"threshold_uncertainty_score":0.007445216},"labels":[],"label_agreement":null},{"id":"W4296131254","doi":"10.1158/1557-3265.sarcomas22-a005","title":"Abstract A005: STING activation overcomes immune escape in osteosarcoma metastasis","year":2022,"lang":"en","type":"article","venue":"Clinical Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Sting; Stimulator of interferon genes; Cancer research; Metastasis; Immune system; Cancer; Tumor microenvironment; Cancer cell; Downregulation and upregulation; Medicine; Immunotherapy; Innate immune system; Immunology; Biology; Internal medicine; Gene","score_opus":0.22584793915273674,"score_gpt":0.49713505180733997,"score_spread":0.27128711265460326,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296131254","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98482263,0.004707773,0.0022808134,0.00055606157,0.0003041192,0.00009952517,0.00069848524,0.0003647819,0.0061658244],"genre_scores_gemma":[0.992176,0.0012772776,0.00074114953,0.00012398532,0.000037754147,0.000040724637,0.000556647,0.000017955044,0.005028555],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999912,0.000012293068,0.00000866299,0.000013300192,0.00002057057,0.00003306977],"domain_scores_gemma":[0.99993277,0.000007659196,0.00001415139,0.000006100012,0.000008716515,0.000030636373],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013173299,0.00027688264,0.0002907629,0.0002529344,0.00012312789,0.00035021934,0.00018827611,0.00029065867,0.005720409],"category_scores_gemma":[0.000109857196,0.000086710825,0.00030589674,0.00013345627,0.00017473518,0.00021407647,0.00016973219,0.00089633226,0.00069632556],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012303407,0.00037035978,0.00056132,0.00022537324,0.000025012947,0.00010733837,0.000026476344,0.00025922444,0.978144,0.00066551246,0.0009401466,0.017444892],"study_design_scores_gemma":[0.00038513285,0.008614569,0.009812902,0.000052701773,0.00011859844,0.00052994094,0.00010286741,0.0033243126,0.9541004,0.00042849366,0.022515938,0.000014117],"about_ca_topic_score_codex":0.00048808366,"about_ca_topic_score_gemma":0.00079141575,"teacher_disagreement_score":0.005720409,"about_ca_system_score_codex":0.0002373717,"about_ca_system_score_gemma":0.00031748973,"threshold_uncertainty_score":0.019136667},"labels":[],"label_agreement":null},{"id":"W4296616425","doi":"10.3390/microorganisms10101886","title":"NFκB1 Polymorphisms Are Associated with Severe Influenza A (H1N1) Virus Infection in a Canadian Population","year":2022,"lang":"en","type":"article","venue":"Microorganisms","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"George & Fay Yee Centre for Healthcare Innovation; University of Manitoba","funders":"Max Rady College of Medicine, University of Manitoba; University of Manitoba; Manitoba Medical Service Foundation","keywords":"Single-nucleotide polymorphism; Genotyping; SNP genotyping; Gene; Influenza A virus; Genotype; Biology; SNP; H1N1 influenza; Medicine; Virology; Genetics; Virus; Immunology; Internal medicine; Disease; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty)","score_opus":0.009487217633406687,"score_gpt":0.2160901711778528,"score_spread":0.20660295354444613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296616425","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99817765,0.00024302356,0.000057972957,0.00008592371,0.000005211872,0.000008624227,0.0006320982,0.000002942532,0.00078650063],"genre_scores_gemma":[0.99917597,0.00012472973,0.00010302787,0.00002795266,0.0000033883882,0.000003483271,0.00028377137,0.0000019134081,0.00027585126],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99973947,0.000015809666,0.000013483461,0.00006601297,0.00007847732,0.0000868567],"domain_scores_gemma":[0.9996037,0.000035530305,0.000084567306,0.000014618367,0.00014090876,0.00012068978],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026467457,0.00035672603,0.00026611556,0.0005663494,0.0019165375,0.0005169516,0.00041172717,0.00031596693,0.0022192895],"category_scores_gemma":[0.0007791997,0.00018499029,0.00035042138,0.001141918,0.0004273847,0.00010901265,0.00027698508,0.0004430256,0.00014145882],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019045496,0.000027466434,0.99409,0.000020465837,0.000052146494,0.00015936099,0.00038181583,0.00006158673,0.0018659682,0.00007629499,0.00042018876,0.0026542088],"study_design_scores_gemma":[0.000008158976,0.000022267515,0.998776,0.000008033134,0.000025371388,0.00016526655,0.0002748792,0.00012874669,0.000115140305,0.000020504878,0.00045030183,0.0000052240807],"about_ca_topic_score_codex":0.9205146,"about_ca_topic_score_gemma":0.928058,"teacher_disagreement_score":0.07948542,"about_ca_system_score_codex":0.004465859,"about_ca_system_score_gemma":0.005243197,"threshold_uncertainty_score":0.15990698},"labels":[],"label_agreement":null},{"id":"W4296663392","doi":"10.1016/j.ccell.2022.08.015","title":"MPS1 inhibition primes immunogenicity of KRAS-LKB1 mutant lung cancer","year":2022,"lang":"en","type":"article","venue":"Cancer Cell","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":101,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Janssen Pharmaceuticals; National Institute of General Medical Sciences; Japan Society for the Promotion of Science; Ludwig Center at Harvard; Takeda Oncology; EMD Serono; National Institutes of Health; Eli Lilly and Company; Associazione Italiana per la Ricerca sul Cancro; Princess Takamatsu Cancer Research Fund; Revolution Medicines; Array BioPharma; Robert A. and Renee E. Belfer Family Foundation; Lilly Oncology; Boehringer Ingelheim; Takeda Pharmaceuticals U.S.A.; Takeda Science Foundation; National Cancer Institute; Foghorn Therapeutics; Gilead Sciences; Dana-Farber Cancer Institute; Japan Agency for Medical Research and Development; Uehara Memorial Foundation; Novartis; AbbVie; Northeastern University; Merck; Dana-Farber/Harvard Cancer Center; AstraZeneca; Canadian Asian Studies Association; Expect Miracles Foundation","keywords":"Cancer research; Intracellular; Apoptosis; Programmed cell death; Biology; In vivo; Cell biology; Sting","score_opus":0.008493374383985472,"score_gpt":0.2553160615356873,"score_spread":0.24682268715170183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296663392","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969572,0.00055763783,0.0003076272,0.00019816459,0.00011137313,0.000023625576,0.00023197656,0.00006652956,0.0015459163],"genre_scores_gemma":[0.9978163,0.00019890249,0.0001807301,0.00007652119,0.000025669257,0.000021679578,0.00021481643,0.000010833417,0.0014544934],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997844,0.00004724502,0.000012971545,0.00002190384,0.000035419293,0.0000980066],"domain_scores_gemma":[0.99988115,0.00002817162,0.00002262654,0.000017484834,0.000009567915,0.000040965042],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014592949,0.0004078695,0.00032587827,0.00018234504,0.00017530525,0.0003424426,0.00014640155,0.00031781377,0.002932285],"category_scores_gemma":[0.00016315046,0.00013731915,0.0002584082,0.0000859968,0.00020904947,0.00020609994,0.00019560063,0.0013300938,0.00051822467],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023728479,0.0002785885,0.0003814985,0.00007584128,0.000014946386,0.00007399799,0.000027951635,0.00029209387,0.9919304,0.0002215514,0.00051336846,0.0038168938],"study_design_scores_gemma":[0.00030647466,0.004434962,0.009849434,0.000027151927,0.00004382352,0.00039530944,0.00016759508,0.0024558736,0.97661567,0.000281267,0.005407954,0.000014631228],"about_ca_topic_score_codex":0.00038977366,"about_ca_topic_score_gemma":0.00065648986,"teacher_disagreement_score":0.002932285,"about_ca_system_score_codex":0.0003456115,"about_ca_system_score_gemma":0.0003650977,"threshold_uncertainty_score":0.009809434},"labels":[],"label_agreement":null},{"id":"W4298399277","doi":"","title":"Proceedings and abstracts of the 7th Joint Conference of the International Cytokine Society and the International Society for Interferon and Cytokine Research, 12-16 October 2008, Montreal, Quebec, Canada.","year":2008,"lang":"en","type":"other","venue":"PubMed","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Cytokine; Library science; Political science; Medicine; Media studies; Immunology; Sociology; Computer science","score_opus":0.033255358642178656,"score_gpt":0.2315071929653084,"score_spread":0.19825183432312973,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4298399277","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0026070182,0.25957713,0.00208865,0.01959483,0.119225346,0.0005516576,0.04960392,0.00074299227,0.54600835],"genre_scores_gemma":[0.002781535,0.08766358,0.0008435081,0.00090684625,0.006713297,0.00012642937,0.011904712,0.00018138225,0.8888787],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994808,0.00004760111,0.00004228662,0.000047109395,0.0003006469,0.00008166474],"domain_scores_gemma":[0.99840087,0.0001468611,0.000095117175,0.000055880893,0.00088443316,0.00041688114],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001034825,0.0014076902,0.0013977941,0.0033816355,0.0015784935,0.0029318277,0.0011445704,0.0008794239,0.31579715],"category_scores_gemma":[0.0021534795,0.00033229525,0.0005848433,0.0035647033,0.0005341498,0.0011673066,0.0010499441,0.0012508765,0.110993005],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009371063,0.000020464546,0.000102666505,0.00039787596,0.000010014912,0.000042884913,0.000022161537,0.000032474076,0.0003447639,0.00032543024,0.96258736,0.036020286],"study_design_scores_gemma":[0.000014874852,0.000016528835,0.0014443108,0.000214934,0.000014643639,0.000054170127,0.00004537796,0.000020253174,0.00023453026,0.00024786362,0.9976858,0.0000067235737],"about_ca_topic_score_codex":0.06251019,"about_ca_topic_score_gemma":0.22018796,"teacher_disagreement_score":0.31579715,"about_ca_system_score_codex":0.0035683247,"about_ca_system_score_gemma":0.008138592,"threshold_uncertainty_score":0.9759323},"labels":[],"label_agreement":null},{"id":"W4302288080","doi":"10.1101/2022.10.03.510562","title":"Proteomics and phosphoproteomics profiling of the co-formulation of type I and II interferons, HeberFERON, in the glioblastoma-derived cell line U-87 MG","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Phosphoproteomics; Kinome; Kinase; Proteomics; Biology; PI3K/AKT/mTOR pathway; MAPK/ERK pathway; Phosphorylation; Cell biology; Signal transduction; Proteome; Cell cycle; Cell culture; Quantitative proteomics; Molecular biology; Cancer research; Protein kinase A; Cell; Protein phosphorylation; Biochemistry; Genetics; Gene","score_opus":0.011081059476708639,"score_gpt":0.22229621139608702,"score_spread":0.21121515191937837,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4302288080","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99321073,0.0026742127,0.0012260987,0.0000759572,0.000029138551,0.000025692521,0.0018957364,0.000042656266,0.00081977976],"genre_scores_gemma":[0.9854232,0.002486581,0.0040422883,0.00017595015,0.000015389902,0.00008529654,0.0039113234,0.000026211532,0.0038336967],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988294,0.0000135951295,0.0000079951915,0.00002473845,0.000046655045,0.000024160845],"domain_scores_gemma":[0.9999578,0.0000054251177,0.000011192123,0.0000040492987,0.000012759676,0.000008711265],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000118278665,0.00029629195,0.00035798212,0.00029823725,0.00019705984,0.0002716714,0.000104866784,0.00020674907,0.00047847666],"category_scores_gemma":[0.000095457865,0.00010938001,0.0002743435,0.00040033908,0.00011412629,0.00014825603,0.00015889267,0.00023344168,0.00024352917],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014268483,0.000014730071,0.0005473068,0.000025648524,0.000007817101,0.000031612883,0.000013872729,0.000029032086,0.9981882,0.000008922386,0.00004271936,0.00094738504],"study_design_scores_gemma":[0.00001251505,0.00039644676,0.059773088,0.000012847894,0.00006754986,0.0003257531,0.00011564627,0.0013545005,0.9351257,0.000025091871,0.0027792347,0.000011619675],"about_ca_topic_score_codex":0.0014844057,"about_ca_topic_score_gemma":0.0018637308,"teacher_disagreement_score":0.0014844057,"about_ca_system_score_codex":0.00021376829,"about_ca_system_score_gemma":0.00016919138,"threshold_uncertainty_score":0.0029515028},"labels":[],"label_agreement":null},{"id":"W4304014154","doi":"10.1016/j.ccell.2022.09.010","title":"A STING operation to expose KRAS and STK11 co-mutated lung cancers","year":2022,"lang":"en","type":"letter","venue":"Cancer Cell","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"EMD Serono; Genentech; European Society for Medical Oncology; Moderna; Mirati Therapeutics; Chugai Pharmaceutical; Society for Immunotherapy of Cancer; Roche; Sanofi; MedImmune; Arrowhead Pharmaceuticals; Merck; GlaxoSmithKline; McGill University; Takeda Pharmaceuticals U.S.A.; Spectrum Pharmaceuticals; University of Texas MD Anderson Cancer Center; Université de Montréal; Pfizer; Eli Lilly and Company; Bristol-Myers Squibb; AstraZeneca; Boehringer Ingelheim","keywords":"STK11; KRAS; Cancer research; Lung cancer; Biology; Sting; Medicine; Mutation; Oncology; Gene; Genetics","score_opus":0.015735370119500932,"score_gpt":0.27773274797483594,"score_spread":0.261997377855335,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4304014154","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.046585254,0.0069099376,0.0019791299,0.8811251,0.036001388,0.00009700382,0.00017247854,0.0002829356,0.026846787],"genre_scores_gemma":[0.30667058,0.005086135,0.0024689557,0.574331,0.06098531,0.00018768437,0.00014325029,0.000090373884,0.05003671],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99959224,0.000090576184,0.000038831222,0.00004676717,0.00012472531,0.00010685305],"domain_scores_gemma":[0.99928623,0.00042236154,0.00004297146,0.00006300351,0.000048917576,0.00013652109],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071708916,0.00036349753,0.00041153943,0.00026118732,0.0009654679,0.0010201694,0.0004653909,0.0105631845,0.0036214925],"category_scores_gemma":[0.0023952972,0.00032101024,0.0007972733,0.00013318054,0.0009883455,0.00064130884,0.0005351418,0.009426391,0.0014991023],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016005285,0.000554411,0.006026936,0.00019273983,0.00015454387,0.088682346,0.00025800322,0.0005507271,0.039316718,0.019406023,0.76920176,0.07405528],"study_design_scores_gemma":[0.0015204872,0.0014532001,0.00768771,0.00018993924,0.00016003291,0.098448575,0.00051854545,0.0035500743,0.028247442,0.024814257,0.83332336,0.000086394786],"about_ca_topic_score_codex":0.00061745953,"about_ca_topic_score_gemma":0.0012073749,"teacher_disagreement_score":0.0105631845,"about_ca_system_score_codex":0.0012810115,"about_ca_system_score_gemma":0.0005681287,"threshold_uncertainty_score":0.012115061},"labels":[],"label_agreement":null},{"id":"W4304128254","doi":"10.1016/j.ymgme.2022.10.001","title":"SARS-CoV-2 mRNA-based vaccines in the Aicardi Goutières Syndrome","year":2022,"lang":"en","type":"article","venue":"Molecular Genetics and Metabolism","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Acuitas Therapeutics (Canada)","funders":"National Center for Advancing Translational Sciences; National Institute of Neurological Disorders and Stroke; National Institutes of Health","keywords":"Messenger RNA; Interferon; Vaccination; Medicine; Immunology; Virology; Gene; Biology; Genetics","score_opus":0.011203046000441128,"score_gpt":0.24326830599746516,"score_spread":0.23206525999702404,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4304128254","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99347734,0.0016941595,0.00082880846,0.0014099388,0.000083835024,0.0000242419,0.00004439826,0.000053983822,0.0023832528],"genre_scores_gemma":[0.9979418,0.00056094315,0.00045860527,0.0003155826,0.00006581043,0.000009498794,0.000038573933,0.0000070407036,0.00060220493],"study_design_codex":"case_report","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998815,0.000045670367,0.000010155782,0.000017681872,0.000019542786,0.000025400874],"domain_scores_gemma":[0.9998554,0.000069615664,0.00002478169,0.0000076513315,0.000007705374,0.00003471711],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001803768,0.00043706477,0.00034968852,0.00032526243,0.00028023313,0.0002011307,0.00012501571,0.00090990384,0.0010057435],"category_scores_gemma":[0.00055936613,0.00009343007,0.0002697861,0.00015630396,0.0005207386,0.00018267483,0.00017377298,0.0006060477,0.00015216137],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007622016,0.0010614257,0.08205248,0.0003051977,0.00021026956,0.4161619,0.0007606392,0.0024829856,0.37998495,0.005890506,0.00430808,0.09915954],"study_design_scores_gemma":[0.0020516957,0.014678016,0.32293925,0.0002410185,0.00053579995,0.5345219,0.0008928224,0.013453348,0.08526867,0.0050336444,0.020296292,0.00008756919],"about_ca_topic_score_codex":0.001106992,"about_ca_topic_score_gemma":0.000734576,"teacher_disagreement_score":0.001106992,"about_ca_system_score_codex":0.0004930195,"about_ca_system_score_gemma":0.00022952071,"threshold_uncertainty_score":0.0035771132},"labels":[],"label_agreement":null},{"id":"W4304789322","doi":"10.3390/v14102211","title":"Transcriptome Analysis of Duck and Chicken Brains Infected with Aquatic Bird Bornavirus-1 (ABBV-1)","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"KEGG; Transcriptome; Biology; Gene; Immune system; Genome; Downregulation and upregulation; Innate immune system; RNA-Seq; Gene expression; Genetics","score_opus":0.015485112262074927,"score_gpt":0.24730867018458028,"score_spread":0.23182355792250536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4304789322","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952814,0.00097380485,0.00066679687,0.000022918355,0.000014885125,0.000017255903,0.0025144704,0.000016088397,0.0004923739],"genre_scores_gemma":[0.9824644,0.0015762345,0.004030166,0.00012442676,0.00001552518,0.00009168863,0.008301975,0.000028911703,0.0033665642],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991834,0.00000554621,0.000004210009,0.000035350833,0.000016229598,0.000020344427],"domain_scores_gemma":[0.99994016,0.000010051981,0.0000165349,0.0000028459187,0.000018301103,0.000011999433],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000069015725,0.00026758766,0.00037893056,0.00043164138,0.00029366472,0.0002751054,0.00008244392,0.00017503666,0.00048340354],"category_scores_gemma":[0.00009347471,0.00012357462,0.00038357655,0.0003321296,0.00020189385,0.00014363042,0.00018264574,0.00029091648,0.0001578099],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030111102,0.000018391553,0.007644141,0.00014374213,0.000026739677,0.00013223039,0.00014990385,0.000085845284,0.98926324,0.000021354257,0.00006359301,0.0021497468],"study_design_scores_gemma":[0.000013693257,0.00056826865,0.8604798,0.00004873645,0.00016879327,0.00076751446,0.001104155,0.0020347321,0.13128594,0.00009369823,0.0034070495,0.000027659768],"about_ca_topic_score_codex":0.0019753266,"about_ca_topic_score_gemma":0.0035011203,"teacher_disagreement_score":0.0019753266,"about_ca_system_score_codex":0.00022033288,"about_ca_system_score_gemma":0.00016057062,"threshold_uncertainty_score":0.0039275885},"labels":[],"label_agreement":null},{"id":"W4304891847","doi":"10.3389/fimmu.2022.1021384","title":"Porcine cGAS-STING signaling induced autophagy inhibits STING downstream IFN and apoptosis","year":2022,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Priority Academic Program Development of Jiangsu Higher Education Institutions; National Natural Science Foundation of China","keywords":"Autophagy; Sting; ATG5; IRF3; Innate immune system; Cell biology; Stimulator of interferon genes; Apoptosis; Signal transduction; ULK1; Biology; RIG-I; TANK-binding kinase 1; Interferon; Chemistry; Immunology; Immune system; Biochemistry; Protein kinase B; Kinase","score_opus":0.011227177046128457,"score_gpt":0.2220375078701241,"score_spread":0.21081033082399564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4304891847","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9911652,0.0034091976,0.0019106471,0.00015591877,0.00007856015,0.000034240224,0.0005064343,0.000088922054,0.002650844],"genre_scores_gemma":[0.993555,0.0012986177,0.0015630051,0.00014808626,0.00002389886,0.000045683584,0.00093765283,0.000014215866,0.0024137928],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998833,0.000019093333,0.000014252158,0.000021783613,0.000016161583,0.000045299355],"domain_scores_gemma":[0.99995136,0.000009189234,0.000014065878,0.0000064599417,0.0000059620274,0.000012958304],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013804107,0.00022319132,0.0003106271,0.0001887494,0.000113805065,0.00023114916,0.00011477248,0.00026611914,0.0013097073],"category_scores_gemma":[0.000081344995,0.00009371971,0.00040519872,0.00010842815,0.00016689114,0.00022236463,0.00011254596,0.0005727731,0.00039519166],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061404885,0.000056141216,0.00031454026,0.00009579852,0.000006132933,0.000040188952,0.000015956572,0.0000621391,0.9965055,0.00007194348,0.0001112627,0.0021063283],"study_design_scores_gemma":[0.000038857,0.0010198366,0.007711257,0.000020659405,0.000023095525,0.00023891541,0.000055922606,0.0011403589,0.98598504,0.00008480927,0.0036738128,0.0000074063337],"about_ca_topic_score_codex":0.00029177425,"about_ca_topic_score_gemma":0.00047152684,"teacher_disagreement_score":0.0013097073,"about_ca_system_score_codex":0.00019318167,"about_ca_system_score_gemma":0.00024082029,"threshold_uncertainty_score":0.0043813586},"labels":[],"label_agreement":null},{"id":"W4307230056","doi":"10.1158/1078-0432.ccr-22-2235","title":"Combination of the STING Agonist MIW815 (ADU-S100) and PD-1 Inhibitor Spartalizumab in Advanced/Metastatic Solid Tumors or Lymphomas: An Open-Label, Multicenter, Phase Ib Study","year":2022,"lang":"en","type":"article","venue":"Clinical Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":227,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"National Center for Advancing Translational Sciences; National Cancer Institute; Center for Clinical and Translational Sciences, University of Texas Health Science Center at Houston; Novartis Pharmaceuticals UK Limited; University of Texas MD Anderson Cancer Center; F. Hoffmann-La Roche; Genentech; AstraZeneca; Novartis Pharmaceuticals Corporation; Pfizer; Bristol-Myers Squibb","keywords":"Medicine; Tolerability; Adverse effect; Sting; Internal medicine; Pharmacodynamics; Gastroenterology; Agonist; Refractory (planetary science); Pharmacokinetics; Pharmacology; Oncology; Receptor","score_opus":0.28112111726796624,"score_gpt":0.5536109955576296,"score_spread":0.27248987828966337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307230056","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99704224,0.0012518496,0.00038391256,0.000092544506,0.000035343808,0.0004410031,0.00018629756,0.000048355305,0.00051863],"genre_scores_gemma":[0.99642795,0.0009897079,0.0007297788,0.00016290662,0.00007363331,0.0004393855,0.0005277181,0.000012681332,0.0006363505],"study_design_codex":"randomized_trial","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.99973816,0.00010903215,0.000018948214,0.000048370086,0.000031688014,0.00005383829],"domain_scores_gemma":[0.9997197,0.000039590443,0.00006058114,0.00003320139,0.000017516422,0.00012948415],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009206013,0.0010735113,0.0014350578,0.00035161184,0.00023741358,0.0006298312,0.00064401055,0.0006872343,0.0014676696],"category_scores_gemma":[0.000380236,0.0003695336,0.0008909051,0.0003315987,0.00061208656,0.0005965104,0.0002422386,0.0017290547,0.00043508442],"study_design_candidate":"nonrandomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.43224642,0.112811245,0.010957918,0.0015512313,0.0021356991,0.0005576636,0.00056463014,0.005953738,0.22262836,0.00036036145,0.0029231706,0.2073095],"study_design_scores_gemma":[0.20669334,0.7562623,0.01127554,0.0000403891,0.00060831674,0.0005367007,0.000073191586,0.0023118923,0.019565448,0.00012812685,0.0024758861,0.000028956158],"about_ca_topic_score_codex":0.0004971303,"about_ca_topic_score_gemma":0.0008484178,"teacher_disagreement_score":0.0014676696,"about_ca_system_score_codex":0.0005133073,"about_ca_system_score_gemma":0.0006971682,"threshold_uncertainty_score":0.004909873},"labels":[],"label_agreement":null},{"id":"W4307990202","doi":"10.3390/ijms232113260","title":"COVID-19 Molecular Pathophysiology: Acetylation of Repurposing Drugs","year":2022,"lang":"en","type":"review","venue":"International Journal of Molecular Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario; University of Ottawa; McGill University Health Centre","funders":"","keywords":"Biology; Innate immune system; Immune system; Acetylation; Interferon; Signal transduction; Immunology; Cell biology; Biochemistry; Gene","score_opus":0.04037838442467951,"score_gpt":0.36506187416223485,"score_spread":0.32468348973755534,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307990202","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00025587686,0.99656004,0.00017541434,0.00038615108,0.00046588085,0.000008868021,0.000030112118,0.000018107143,0.002099483],"genre_scores_gemma":[0.0021085124,0.9938234,0.0003017476,0.00047059165,0.00045908667,0.000016185575,0.00009586305,0.0000041274184,0.002720371],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999884,0.000019522902,0.000018523315,0.000018488283,0.000044531807,0.00001493284],"domain_scores_gemma":[0.9998584,0.000042426025,0.000024084175,0.0000067201827,0.000045266228,0.000023128194],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030863247,0.0007912272,0.0010723736,0.0012767123,0.00022338824,0.0008089557,0.00067863433,0.00093827915,0.004501541],"category_scores_gemma":[0.00036665998,0.0002175828,0.0004244312,0.00094219757,0.00030594863,0.0008099068,0.0004931027,0.0018431487,0.0036956032],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013430913,0.00009692594,0.00020359813,0.006999087,0.000076474345,0.00034217417,0.000030131621,0.00020784613,0.0027177671,0.0030169578,0.040867407,0.9453073],"study_design_scores_gemma":[0.000030432459,0.00011859432,0.0007008148,0.0010144457,0.000057322497,0.001735637,0.00002121683,0.00008422399,0.0008109864,0.0010478112,0.99436706,0.000011462936],"about_ca_topic_score_codex":0.0004921021,"about_ca_topic_score_gemma":0.0010746589,"teacher_disagreement_score":0.004501541,"about_ca_system_score_codex":0.00044620497,"about_ca_system_score_gemma":0.0005285988,"threshold_uncertainty_score":0.015059173},"labels":[],"label_agreement":null},{"id":"W4308303580","doi":"10.1186/s44149-022-00053-9","title":"Altered gene expression in human brain microvascular endothelial cells in response to the infection of influenza H1N1 virus","year":2022,"lang":"en","type":"article","venue":"Animal Diseases","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Fundamental Research Funds for the Central Universities; Huazhong Agricultural University","keywords":"Biology; Proinflammatory cytokine; Innate immune system; Immunology; Neuroinflammation; Immune system; Virus; Chemokine; Transcriptome; Microglia; Interferon; Pattern recognition receptor; Human brain; Influenza A virus; Virology; Gene expression; Inflammation; Gene; Neuroscience; Genetics","score_opus":0.013296194568634382,"score_gpt":0.2687982144739618,"score_spread":0.2555020199053274,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308303580","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995618,0.001519362,0.00086126564,0.000044707664,0.000025927347,0.000016334685,0.0011960821,0.00001747696,0.0007009179],"genre_scores_gemma":[0.993034,0.0012149714,0.0014494238,0.00010386015,0.000022337583,0.00007556375,0.0021501344,0.000006785112,0.0019429183],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998797,0.000012942925,0.000008210361,0.00003674151,0.000024539115,0.00003782208],"domain_scores_gemma":[0.9999455,0.0000113763135,0.000011479379,0.0000050049784,0.000016878068,0.000009711422],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008339498,0.00011996934,0.00018423004,0.0002454991,0.00015749452,0.00026038644,0.000061345236,0.00017273075,0.000767269],"category_scores_gemma":[0.00013032179,0.0000828415,0.0001746972,0.00031569836,0.00012184081,0.00010312405,0.000092701106,0.0002618029,0.0002042635],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020145114,0.000024437024,0.002259856,0.000042097665,0.000012264082,0.00012982609,0.00009396256,0.000034008794,0.99569243,0.000037025144,0.000049138554,0.0014235409],"study_design_scores_gemma":[0.000031820247,0.0011569139,0.32419044,0.000025821664,0.0001231596,0.0014244086,0.0007360381,0.002007705,0.6650474,0.00019584032,0.005029049,0.000031506417],"about_ca_topic_score_codex":0.0010907344,"about_ca_topic_score_gemma":0.0009799924,"teacher_disagreement_score":0.0010907344,"about_ca_system_score_codex":0.0001341991,"about_ca_system_score_gemma":0.00010931516,"threshold_uncertainty_score":0.0025667548},"labels":[],"label_agreement":null},{"id":"W4308332179","doi":"10.3390/v14112445","title":"CXCL10 Chemokine: A Critical Player in RNA and DNA Viral Infections","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Sharjah Research Academy; Terry Fox Foundation","keywords":"CXCL10; Chemokine; CXCR3; Chemokine receptor; Biology; RNA; CCL13; Immune system; CXCL9; Cell biology; Immunology; Virology; Genetics; Gene","score_opus":0.06356703907141598,"score_gpt":0.3617303434146256,"score_spread":0.29816330434320965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308332179","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00020114974,0.99790925,0.00014244228,0.00032762016,0.0003677285,0.0000038740727,0.000018765682,0.000008589459,0.0010205858],"genre_scores_gemma":[0.0011796034,0.99703574,0.0001516942,0.00023417057,0.00039324444,0.0000063425705,0.000038505405,0.0000015973111,0.00095911004],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99989665,0.000015181374,0.00001244355,0.000018194713,0.000040411145,0.000017126142],"domain_scores_gemma":[0.9999013,0.000035175162,0.0000132726045,0.000002307608,0.000030956384,0.000016951071],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025944848,0.000611876,0.0006558307,0.0012410654,0.00023030967,0.0007899755,0.00041462036,0.0008011628,0.002198056],"category_scores_gemma":[0.0002534991,0.00013678816,0.00026175796,0.0010771772,0.00036191838,0.00075564894,0.00043270117,0.0014762052,0.0014019054],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013081616,0.000060711707,0.00030378066,0.011471131,0.000037783175,0.0003496014,0.000090294605,0.00030485273,0.006521434,0.006377137,0.050458755,0.9238937],"study_design_scores_gemma":[0.00000850476,0.000091091526,0.0006534186,0.0014950982,0.0000319051,0.0016680171,0.0000467645,0.00005861031,0.0008542822,0.0013805794,0.99369943,0.000012280632],"about_ca_topic_score_codex":0.0005784952,"about_ca_topic_score_gemma":0.00068855326,"teacher_disagreement_score":0.002198056,"about_ca_system_score_codex":0.00044879428,"about_ca_system_score_gemma":0.0009163019,"threshold_uncertainty_score":0.007353306},"labels":[],"label_agreement":null},{"id":"W4308400024","doi":"10.1136/jitc-2022-sitc2022.1156","title":"1156 STING activation in sarcoma: assessing translational therapeutic strategies","year":2022,"lang":"en","type":"article","venue":"Regular and Young Investigator Award Abstracts","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Sting; Stimulator of interferon genes; Medicine; Cancer research; Immunotherapy; Soft tissue sarcoma; Combination therapy; Sarcoma; Immune system; Flow cytometry; Pharmacology; Immunology; Internal medicine; Pathology; Innate immune system","score_opus":0.022096676126277227,"score_gpt":0.2623944532731848,"score_spread":0.24029777714690756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308400024","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98824525,0.0070157517,0.0012504656,0.0001844319,0.000044036165,0.0001986283,0.00024198215,0.000032866956,0.002786624],"genre_scores_gemma":[0.9925696,0.0039664437,0.0018484833,0.000054496937,0.000030180856,0.0000945528,0.00032306893,0.0000052856694,0.0011078696],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99985063,0.00005022211,0.000012620811,0.000015594895,0.00003871515,0.000032181866],"domain_scores_gemma":[0.99990225,0.00001845883,0.00002456362,0.000009322721,0.000012533062,0.000032947497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052579807,0.0003212558,0.0003046772,0.00031976466,0.00011584177,0.00046128038,0.00022102197,0.00034140144,0.0016620655],"category_scores_gemma":[0.00012561187,0.000105222876,0.00026106086,0.00019848601,0.00026065324,0.00033210777,0.00014826805,0.0007117647,0.0002783917],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002866665,0.0016934355,0.0017451908,0.00042383495,0.00004249461,0.00007281409,0.000057425943,0.001345431,0.9581079,0.00059701805,0.00028332212,0.032764472],"study_design_scores_gemma":[0.00039179038,0.042980734,0.0073550222,0.00006107726,0.00014617131,0.00032161264,0.000106462336,0.0029985285,0.93781996,0.00017721158,0.007628516,0.000013017525],"about_ca_topic_score_codex":0.00046536454,"about_ca_topic_score_gemma":0.001047966,"teacher_disagreement_score":0.0016620655,"about_ca_system_score_codex":0.00035732595,"about_ca_system_score_gemma":0.0003602432,"threshold_uncertainty_score":0.0055602193},"labels":[],"label_agreement":null},{"id":"W4308417064","doi":"10.3389/fnins.2022.1027116","title":"Neurons and glial cells acquire a senescent signature after repeated mild traumatic brain injury in a sex-dependent manner","year":2022,"lang":"en","type":"article","venue":"Frontiers in Neuroscience","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Senescence; Traumatic brain injury; Astrogliosis; Medicine; DNA damage; Neurodegeneration; Hippocampal formation; Biology; Neuroscience; Internal medicine; Central nervous system; Disease","score_opus":0.011380962426218893,"score_gpt":0.23943391779885892,"score_spread":0.22805295537264003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308417064","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99636394,0.0015397717,0.0009878245,0.000042042015,0.00002055703,0.000013685448,0.0003606184,0.00003636893,0.0006352358],"genre_scores_gemma":[0.99257904,0.0016436463,0.00086951785,0.0000741125,0.000020108118,0.000052626856,0.0005671918,0.000024920573,0.0041687563],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998708,0.000011269611,0.000011575402,0.000041120944,0.000037611186,0.000027631504],"domain_scores_gemma":[0.9998248,0.000007379493,0.000086485525,0.000017068009,0.000032076616,0.000032189695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011500058,0.00028675373,0.00020517154,0.0004948602,0.00013570893,0.00025287486,0.00012446416,0.00018899413,0.0011024426],"category_scores_gemma":[0.00013145342,0.00013571153,0.0002780755,0.00017971842,0.00019790661,0.00014467133,0.00022365402,0.00036962275,0.00029980607],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024075115,0.000035902154,0.0062268972,0.000040365685,0.00001685308,0.00024123218,0.00008759109,0.000017653207,0.98807204,0.00005527768,0.000049691236,0.004915721],"study_design_scores_gemma":[0.000028956965,0.0017732921,0.41921252,0.000032434127,0.00010267722,0.0039572516,0.00039539716,0.00042860175,0.56918305,0.00023568231,0.004621656,0.00002851265],"about_ca_topic_score_codex":0.00028415336,"about_ca_topic_score_gemma":0.00051919004,"teacher_disagreement_score":0.0011024426,"about_ca_system_score_codex":0.00009731054,"about_ca_system_score_gemma":0.00012853867,"threshold_uncertainty_score":0.0036880374},"labels":[],"label_agreement":null},{"id":"W4309097338","doi":"10.1128/jvi.01476-22","title":"The Porcine Cyclic GMP-AMP Synthase-STING Pathway Exerts an Unusual Antiviral Function Independent of Interferon and Autophagy","year":2022,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Natural Science Foundation of China","keywords":"IRF3; Sting; Autophagy; Stimulator of interferon genes; Biology; Interferon; TANK-binding kinase 1; Vesicular stomatitis virus; ULK1; Innate immune system; Virus; RIG-I; DNA virus; Mutant; Interferon regulatory factors; Virology; Cell biology; Apoptosis; Kinase; Immune system; Immunology; Biochemistry; Gene; Protein kinase A","score_opus":0.013547139993507637,"score_gpt":0.24767993975058836,"score_spread":0.23413279975708073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309097338","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9906557,0.0027789755,0.0034003665,0.00007976677,0.00002259222,0.000011902017,0.00014954671,0.00004019146,0.0028609484],"genre_scores_gemma":[0.99687165,0.00059194147,0.0016278283,0.000029098532,0.000009142683,0.0000068102618,0.00019256899,0.0000049263394,0.00066590856],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993885,0.000013878081,0.000004441229,0.000012019025,0.000010708309,0.000020143076],"domain_scores_gemma":[0.9999535,0.000008320172,0.000014230328,0.000007701949,0.0000036275896,0.000012703236],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009131549,0.00019909408,0.00014987327,0.00022149959,0.00011249983,0.00025040773,0.00008094,0.00019636398,0.00043231918],"category_scores_gemma":[0.000059995447,0.000063071355,0.0002397481,0.000097376724,0.00023921246,0.0002760526,0.00014307434,0.00027173405,0.00015279019],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000064030144,0.0000051028233,0.0003747719,0.000020216925,0.0000021079743,0.00007368707,0.0000070115193,0.000041152944,0.9978928,0.00016392546,0.000013701259,0.0013414283],"study_design_scores_gemma":[0.000012840382,0.00049013796,0.018984051,0.000014944066,0.000020083811,0.0017245518,0.000057942383,0.0017642803,0.97169995,0.00044030667,0.0047822692,0.000008704294],"about_ca_topic_score_codex":0.00013628147,"about_ca_topic_score_gemma":0.00031364846,"teacher_disagreement_score":0.00043231918,"about_ca_system_score_codex":0.00018121288,"about_ca_system_score_gemma":0.0001627766,"threshold_uncertainty_score":0.0014462471},"labels":[],"label_agreement":null},{"id":"W4309571070","doi":"10.3390/ijms232314504","title":"Lipid Nanoparticles Delivering Constitutively Active STING mRNA to Stimulate Antitumor Immunity","year":2022,"lang":"en","type":"article","venue":"International Journal of Molecular Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Acuitas Therapeutics (Canada)","funders":"National Institute of Allergy and Infectious Diseases; Monash University; National Cancer Institute; University of Pennsylvania","keywords":"Sting; Immunity; Messenger RNA; Cell biology; Chemistry; Immunology; Biology; Immune system; Gene; Biochemistry; Engineering","score_opus":0.0212496794197865,"score_gpt":0.29296869532313363,"score_spread":0.2717190159033471,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309571070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97855943,0.0023365612,0.015407031,0.00024798533,0.0000632425,0.00004658365,0.000082562394,0.00012644418,0.0031301144],"genre_scores_gemma":[0.9910529,0.0011026472,0.0054164915,0.000084192696,0.000017267303,0.00003394087,0.000083316954,0.000014813972,0.0021945348],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99996126,0.0000062373,0.000002524959,0.000009264541,0.000012405133,0.000008389548],"domain_scores_gemma":[0.99997437,0.0000051854504,0.000009632395,0.000002140043,0.00000416491,0.0000045321867],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006942723,0.00020026974,0.00010935852,0.00010205296,0.00006257549,0.0001414336,0.00008192511,0.0002346183,0.000541726],"category_scores_gemma":[0.000062628445,0.000052925727,0.00012154154,0.00006193976,0.00012463375,0.00017608456,0.00013567865,0.00027841135,0.00019304523],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020116591,0.000010309394,0.00003346021,0.000025589517,0.0000014931935,0.00002166601,0.0000076270135,0.00008562407,0.9976713,0.00013690925,0.000037506696,0.0019483814],"study_design_scores_gemma":[0.000010151003,0.00020926794,0.00019919072,0.0000036535143,0.000008160543,0.00006877043,0.000007511438,0.0010852066,0.99614716,0.000046398265,0.002212363,0.0000022082133],"about_ca_topic_score_codex":0.0001455769,"about_ca_topic_score_gemma":0.00019768784,"teacher_disagreement_score":0.000541726,"about_ca_system_score_codex":0.00017457147,"about_ca_system_score_gemma":0.00012439107,"threshold_uncertainty_score":0.0018122196},"labels":[],"label_agreement":null},{"id":"W4309656465","doi":"10.1158/2326-6066.cir-22-0260","title":"CD73 Inhibits cGAS–STING and Cooperates with CD39 to Promote Pancreatic Cancer","year":2022,"lang":"en","type":"article","venue":"Cancer Immunology Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research; Princess Margaret Cancer Centre; Vector Institute; Hôpital de l'Enfant-Jésus; Université de Montréal; University of Toronto; University Health Network; Artificial Intelligence in Medicine (Canada); Centre Hospitalier de l’Université de Montréal; Institute for Research in Immunology and Cancer","funders":"National Cancer Institute; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Université de Montréal; Terry Fox Research Institute","keywords":"Sting; Pancreatic cancer; Medicine; Cancer; Cancer research; Cancer immunotherapy; Immunotherapy; Immunology; Internal medicine","score_opus":0.04895646800022256,"score_gpt":0.3561988983489186,"score_spread":0.307242430348696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309656465","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957314,0.0015533786,0.0008871902,0.00009046035,0.000022545122,0.000024663568,0.000142453,0.000050634113,0.0014973221],"genre_scores_gemma":[0.99716955,0.00066260505,0.00061193114,0.000027149737,0.000008683131,0.000016913951,0.00021573456,0.0000054612005,0.0012818594],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990964,0.000015003656,0.000006849301,0.000012700498,0.000023246095,0.00003262568],"domain_scores_gemma":[0.99997175,0.000003485683,0.000006683789,0.0000045889497,0.0000028414174,0.000010630961],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000081761835,0.0002663379,0.00016328353,0.00016263108,0.00013778714,0.00017768041,0.0001149028,0.00014343989,0.0008855593],"category_scores_gemma":[0.00007051375,0.000059179416,0.00017154602,0.00016881234,0.00012068393,0.000113364775,0.000113339054,0.00030494513,0.00021736156],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021320416,0.00010489478,0.00028436995,0.000032524338,0.0000069053904,0.000079354184,0.000009984527,0.00012981887,0.99429154,0.00014553854,0.00011161775,0.0045903213],"study_design_scores_gemma":[0.000038718048,0.00062225596,0.0039005466,0.0000045459255,0.000019262847,0.00034158543,0.000014515711,0.0012653018,0.9884815,0.00005287166,0.0052564605,0.000002413485],"about_ca_topic_score_codex":0.0006149992,"about_ca_topic_score_gemma":0.0013317429,"teacher_disagreement_score":0.0008855593,"about_ca_system_score_codex":0.00028255297,"about_ca_system_score_gemma":0.00027715598,"threshold_uncertainty_score":0.00296247},"labels":[],"label_agreement":null},{"id":"W4309659057","doi":"10.1093/gigascience/giac103","title":"Defining the characteristics of interferon-alpha–stimulated human genes: insight from expression data and machine learning","year":2022,"lang":"en","type":"article","venue":"GigaScience","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Medical Research Council Canada; China Scholarship Council","keywords":"Gene; Biology; Computational biology; Interferon; Genetics","score_opus":0.02760187418918106,"score_gpt":0.2665313053611547,"score_spread":0.23892943117197366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309659057","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91167957,0.0013204148,0.08435282,0.00031702395,0.000013542972,0.0000352004,0.0011321855,0.00012191639,0.0010273799],"genre_scores_gemma":[0.97739834,0.00035973807,0.02093575,0.00004595421,0.000026002663,0.000035848374,0.0010166334,0.00001343636,0.00016840834],"study_design_codex":"observational","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9997849,0.00006619294,0.000015903568,0.000074671116,0.000037523798,0.000020871677],"domain_scores_gemma":[0.998934,0.00068504823,0.00019855259,0.00006727079,0.000084216095,0.000031020278],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000518235,0.00028355364,0.00032980228,0.0010311981,0.00019821651,0.0003498156,0.00022951349,0.000324344,0.00047139943],"category_scores_gemma":[0.0014979052,0.00009010305,0.00031577723,0.0011375302,0.00043996223,0.0003966627,0.00017223177,0.00034526867,0.00013275478],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00093427906,0.00046292396,0.3562423,0.0007198786,0.00017356107,0.0007263069,0.00040354,0.13740009,0.26686937,0.006141116,0.0010474392,0.22887917],"study_design_scores_gemma":[0.00002844926,0.00031545103,0.22680216,0.00006929986,0.00010685563,0.0009784517,0.0002867976,0.69830346,0.04553527,0.023945242,0.003581958,0.000046608682],"about_ca_topic_score_codex":0.0007382653,"about_ca_topic_score_gemma":0.0005859385,"teacher_disagreement_score":0.0010311981,"about_ca_system_score_codex":0.00030874164,"about_ca_system_score_gemma":0.0002529689,"threshold_uncertainty_score":0.0027406812},"labels":[],"label_agreement":null},{"id":"W4309728884","doi":"10.1186/s12985-022-01931-x","title":"Antiviral role of IFITM3 in prototype foamy virus infection","year":2022,"lang":"en","type":"article","venue":"Virology Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China; McGill University","keywords":"Biology; Viral replication; Virus; Virology; Gene knockdown; Cell culture; Cytopathic effect; Viral entry; Permissiveness; Transfection; Cell; Interferon; Cell biology; Genetics","score_opus":0.007611416506231156,"score_gpt":0.23792721398987676,"score_spread":0.2303157974836456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309728884","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9905708,0.0046600997,0.0028848136,0.00016191213,0.000059489324,0.000036751113,0.00044603425,0.00010987499,0.001070156],"genre_scores_gemma":[0.9964647,0.00077084027,0.0016098049,0.0000649402,0.000017232696,0.000043136646,0.000549771,0.000008330263,0.0004712373],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991,0.000014721296,0.000008771335,0.000017577378,0.000020024227,0.000028896246],"domain_scores_gemma":[0.9999194,0.000020903752,0.00002418757,0.0000073069154,0.0000124978515,0.00001566503],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016037186,0.00026729237,0.00022346347,0.00016751866,0.00015396897,0.00018626075,0.00014444513,0.00039054244,0.0010139936],"category_scores_gemma":[0.00020276355,0.00005486949,0.00033466954,0.00008567258,0.00020849629,0.00017709163,0.00012503157,0.000434229,0.0001600564],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023806897,0.000030408928,0.00072137814,0.00009748775,0.000006208005,0.00013452423,0.000015918718,0.00007467357,0.99633396,0.00009937052,0.00010095434,0.0021470832],"study_design_scores_gemma":[0.0000522536,0.0005694565,0.01420151,0.000031777785,0.00004209945,0.0013542047,0.000070658265,0.0020746328,0.9770493,0.00022453566,0.0043197297,0.000009789644],"about_ca_topic_score_codex":0.00026014898,"about_ca_topic_score_gemma":0.00022429466,"teacher_disagreement_score":0.0010139936,"about_ca_system_score_codex":0.00031361525,"about_ca_system_score_gemma":0.00018260152,"threshold_uncertainty_score":0.00339216},"labels":[],"label_agreement":null},{"id":"W4310256150","doi":"10.3389/fmicb.2022.1068328","title":"Interaction between chicken TRIM25 and MDA5 and their role in mediated antiviral activity against IBDV infection","year":2022,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Infection and Immunity; Agencia Estatal de Investigación; St. George's, University of London; European Regional Development Fund; Universidade de Santiago de Compostela; Pfizer; European Commission; Johnson and Johnson","keywords":"Virology; Biology; Microbiology","score_opus":0.006918275197440341,"score_gpt":0.22006946160337293,"score_spread":0.21315118640593259,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310256150","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99570245,0.002391207,0.00088374526,0.000049163144,0.000017117478,0.000009538657,0.00012955628,0.000027788223,0.0007894736],"genre_scores_gemma":[0.997511,0.00029215508,0.00064490404,0.000028318005,0.0000032990406,0.000009006257,0.00027778986,0.0000040283544,0.0012293814],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998684,0.000022409144,0.000011536691,0.000033216907,0.000022621245,0.000041709496],"domain_scores_gemma":[0.99994075,0.00000856565,0.000015875828,0.0000079221345,0.000005639772,0.000021334168],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000995365,0.00023416127,0.00015476896,0.00020932592,0.00018470477,0.00029283602,0.00019461263,0.00031996807,0.00078676426],"category_scores_gemma":[0.00008515643,0.00013585952,0.00035373864,0.00007581513,0.00014621558,0.00016190326,0.00022400059,0.00029185714,0.00033846582],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007825031,0.0000085958,0.00028295623,0.000025991474,0.000005843212,0.000051855375,0.00001029337,0.00002533861,0.99904126,0.000063618325,0.000017652797,0.00038832365],"study_design_scores_gemma":[0.000018192815,0.00024438387,0.021950424,0.0000172035,0.000040193092,0.0005144833,0.00008639007,0.0019289621,0.9714841,0.00005059921,0.0036571473,0.000007952903],"about_ca_topic_score_codex":0.0008414925,"about_ca_topic_score_gemma":0.0013333167,"teacher_disagreement_score":0.0008414925,"about_ca_system_score_codex":0.00044784704,"about_ca_system_score_gemma":0.00010708395,"threshold_uncertainty_score":0.0032494068},"labels":[],"label_agreement":null},{"id":"W4310546590","doi":"10.3389/fimmu.2022.1007718","title":"Interferon-inducible SAMHD1 restricts viral replication through downregulation of lipid synthesis","year":2022,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital","funders":"","keywords":"SAMHD1; Biology; Viral replication; Gene silencing; Interferon; Virology; RNA interference; Gene; Virus; RNA; Genetics; Reverse transcriptase","score_opus":0.014699682634824051,"score_gpt":0.24283395067478716,"score_spread":0.22813426803996312,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310546590","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9868155,0.0047621573,0.004520614,0.00017049826,0.00007625023,0.000024061163,0.00094508,0.0001869372,0.0024988628],"genre_scores_gemma":[0.99380714,0.00093486486,0.0019538405,0.00005465936,0.00002120812,0.00002270082,0.00094806077,0.000019148047,0.0022382387],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998995,0.0000108891945,0.000007406293,0.000032313408,0.000023484952,0.00002639135],"domain_scores_gemma":[0.9998983,0.000016380305,0.00003144957,0.000011794151,0.000016373184,0.000025677205],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000117111595,0.00029644452,0.00016951466,0.00016911734,0.000179877,0.0002056265,0.00015004571,0.00016540781,0.0018226018],"category_scores_gemma":[0.0000826552,0.00008717469,0.0002108929,0.00011334846,0.00018910138,0.00015058377,0.00020714171,0.0003517195,0.0004950216],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000062194995,0.00000765165,0.00025093497,0.000035766196,0.0000024002156,0.000016358632,0.000004706319,0.000019928199,0.99878865,0.000049757513,0.000037871072,0.00072381814],"study_design_scores_gemma":[0.000009282138,0.00010607296,0.007931144,0.0000074148056,0.000011436416,0.00011284754,0.000017899538,0.0005239235,0.9875272,0.000061144565,0.0036883932,0.0000032848573],"about_ca_topic_score_codex":0.0002046807,"about_ca_topic_score_gemma":0.000393709,"teacher_disagreement_score":0.0018226018,"about_ca_system_score_codex":0.00028356255,"about_ca_system_score_gemma":0.00016400583,"threshold_uncertainty_score":0.0060971975},"labels":[],"label_agreement":null},{"id":"W4311054707","doi":"10.3390/biomedicines10123101","title":"Repeat Element Activation-Driven Inflammation: Role of NFκB and Implications in Normal Development and Cancer?","year":2022,"lang":"en","type":"review","venue":"Biomedicines","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer","funders":"Fondation pour la Recherche Médicale; Fondation ARC pour la Recherche sur le Cancer; Agence Nationale de la Recherche","keywords":"Biology; Innate immune system; Context (archaeology); Cancer; Immune system; Long terminal repeat; Signal transduction; Genetics; Genome instability; Cell signaling; Cancer cell; Cell biology; Genome; Immunology; DNA damage; DNA; Gene","score_opus":0.03265661452163547,"score_gpt":0.31339085443477216,"score_spread":0.2807342399131367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4311054707","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0014118674,0.99537295,0.0002988772,0.0015564614,0.00036159664,0.0000020746138,0.000015973437,0.0000052673295,0.00097493664],"genre_scores_gemma":[0.02041632,0.97528446,0.0003796971,0.0009940454,0.0011875028,0.000009736852,0.00003693647,0.0000040093873,0.0016873392],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99986625,0.000026930336,0.000015556843,0.000029965844,0.000030354457,0.00003080531],"domain_scores_gemma":[0.99988353,0.000033385637,0.0000348002,0.000005448964,0.000018274639,0.00002461069],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039493537,0.00042680025,0.00054328213,0.0005853764,0.00017954817,0.0009178345,0.00043547238,0.0008317834,0.0010192809],"category_scores_gemma":[0.00026550682,0.00010522358,0.00026047064,0.00059619045,0.0011740336,0.0012074296,0.00040210423,0.0011440804,0.00043742906],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008050848,0.00013772327,0.003587194,0.016027616,0.00017957672,0.0032501565,0.0011454923,0.0006379527,0.09114409,0.07513557,0.03151712,0.7764325],"study_design_scores_gemma":[0.000038770257,0.00045804743,0.009393873,0.0031212345,0.00011386479,0.011178657,0.0008583391,0.0004032517,0.0124494955,0.05411544,0.90780425,0.00006459107],"about_ca_topic_score_codex":0.0004895019,"about_ca_topic_score_gemma":0.0007492026,"teacher_disagreement_score":0.0010192809,"about_ca_system_score_codex":0.00069318915,"about_ca_system_score_gemma":0.000613362,"threshold_uncertainty_score":0.00502944},"labels":[],"label_agreement":null},{"id":"W4311098666","doi":"10.1158/2326-6074.tumimm22-a51","title":"Abstract A51: STING activation overcomes immune escape in osteosarcoma metastasis","year":2022,"lang":"en","type":"article","venue":"Cancer Immunology Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Sting; Stimulator of interferon genes; Cancer research; Metastasis; Immune system; Cancer; Tumor microenvironment; Cancer cell; Immunotherapy; Medicine; Downregulation and upregulation; Innate immune system; Immunology; Biology; Internal medicine; Gene","score_opus":0.0800805621876029,"score_gpt":0.37718980849216177,"score_spread":0.29710924630455887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4311098666","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98938715,0.0038296555,0.0016733349,0.00029584242,0.0002365992,0.000094210365,0.00041334983,0.00022089401,0.0038490212],"genre_scores_gemma":[0.99454653,0.0011654041,0.00059359585,0.00009395383,0.000029397164,0.0000436678,0.0004050123,0.000012751965,0.00310968],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998951,0.000015305774,0.000012006344,0.000017563076,0.000021221369,0.000038765676],"domain_scores_gemma":[0.9999361,0.0000072772864,0.000013447031,0.000007796317,0.0000066113125,0.00002884067],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001354682,0.0003128782,0.0003205286,0.0002752513,0.00012488417,0.0003051382,0.00019347918,0.00027344257,0.0041325707],"category_scores_gemma":[0.00011745203,0.00009310437,0.00030557957,0.00013335947,0.00018336622,0.00020314613,0.00017846008,0.00085121754,0.000592495],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008654267,0.00037698206,0.00037900743,0.00014706895,0.000021212743,0.00009352809,0.000020472422,0.00026728856,0.9844258,0.0004355311,0.0005665721,0.01240101],"study_design_scores_gemma":[0.0004019028,0.011005039,0.007843985,0.000045144265,0.000117343705,0.00051611837,0.00007643234,0.0030691412,0.96145993,0.00031145886,0.015138542,0.000014957556],"about_ca_topic_score_codex":0.0005037426,"about_ca_topic_score_gemma":0.00088447274,"teacher_disagreement_score":0.0041325707,"about_ca_system_score_codex":0.00020445212,"about_ca_system_score_gemma":0.0002993745,"threshold_uncertainty_score":0.0138248205},"labels":[],"label_agreement":null},{"id":"W4311521679","doi":"10.3390/pharmaceutics14122710","title":"Exploiting the DNA Damaging Activity of Liposomal Low Dose Cytarabine for Cancer Immunotherapy","year":2022,"lang":"en","type":"article","venue":"Pharmaceutics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"NOSM University; Institut National de la Recherche Scientifique; Université du Québec à Montréal; Health Sciences North","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Glycomics Network; Canadian Institutes of Health Research","keywords":"Immunotherapy; Cytotoxic T cell; Immune system; Cancer research; Cancer immunotherapy; Tumor microenvironment; DNA damage; Priming (agriculture); Immunology; T cell; Biology; Medicine; In vitro; DNA","score_opus":0.049689224366086394,"score_gpt":0.3486760732216087,"score_spread":0.2989868488555223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4311521679","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97469395,0.0073599606,0.015320528,0.00020884506,0.00004988328,0.00011440589,0.00011817055,0.0001043956,0.0020298967],"genre_scores_gemma":[0.9922087,0.0016081191,0.005115527,0.000035837427,0.000013761223,0.00003227564,0.00006693596,0.000007802009,0.0009109382],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999573,0.000010571502,0.000003264546,0.000008032931,0.000012200711,0.000008748225],"domain_scores_gemma":[0.9999716,0.000005352086,0.0000099313,0.0000039177207,0.0000038792627,0.000005217919],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000057424655,0.0002023267,0.000118426055,0.00012368367,0.00007633783,0.00018239931,0.00009065385,0.00019909124,0.00076931197],"category_scores_gemma":[0.000060668583,0.000048911905,0.00010586842,0.00007130142,0.00013705516,0.00015968444,0.00014956234,0.00033072292,0.00020517937],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036433445,0.000011736059,0.000031681375,0.000041638108,0.0000014967255,0.000016829446,0.000005828633,0.00008941048,0.9972855,0.00006496568,0.000013467062,0.00240099],"study_design_scores_gemma":[0.000010742238,0.000377203,0.00041099195,0.000004820473,0.000008212821,0.00019671487,0.000006812793,0.0006870782,0.9959144,0.000030625964,0.0023501178,0.0000023730129],"about_ca_topic_score_codex":0.00013769322,"about_ca_topic_score_gemma":0.00019866326,"teacher_disagreement_score":0.00076931197,"about_ca_system_score_codex":0.00012762926,"about_ca_system_score_gemma":0.000111057605,"threshold_uncertainty_score":0.0025736094},"labels":[],"label_agreement":null},{"id":"W4312093686","doi":"10.1371/journal.ppat.1011065","title":"Ubiquitin variants potently inhibit SARS-CoV-2 PLpro and viral replication via a novel site distal to the protease active site","year":2022,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; University of Waterloo","funders":"Canadian Institutes of Health Research; HORIZON EUROPE Framework Programme; National Institutes of Health; Mercatus Center, George Mason University; National Institute of Allergy and Infectious Diseases; European Commission; George Mason University","keywords":"Virology; Viral replication; Protease; Biology; Active site; Ubiquitin; Replication (statistics); Genetics; Virus; Enzyme; Biochemistry; Gene","score_opus":0.021042278554971754,"score_gpt":0.24913973832303382,"score_spread":0.22809745976806206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312093686","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950471,0.0012479387,0.0016622022,0.000039205006,0.00002542729,0.000028726658,0.00015704121,0.000057793673,0.0017347093],"genre_scores_gemma":[0.99629956,0.0005213235,0.00088900875,0.00005040205,0.0000060252833,0.000014425069,0.0003053171,0.000009937671,0.0019039975],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999908,0.000010901371,0.0000074813856,0.000014366239,0.000026176232,0.000033025826],"domain_scores_gemma":[0.9999641,0.000007504222,0.000008050256,0.0000052440496,0.000004791713,0.000010220068],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007575862,0.000322415,0.00024975324,0.00013517155,0.00010565269,0.0002218386,0.00015543938,0.00021467147,0.0010630763],"category_scores_gemma":[0.00007786561,0.00011239678,0.00016661671,0.00012260207,0.00012355587,0.00011291436,0.000111016634,0.00029623602,0.00027154788],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024132353,0.0001500182,0.000264535,0.00002700947,0.000011476912,0.00005293324,0.000009620058,0.00036641472,0.99427575,0.00010553086,0.000101519014,0.004393795],"study_design_scores_gemma":[0.000030224623,0.0014237325,0.002179012,0.0000033446051,0.000010988377,0.00023380348,0.000012576063,0.00096307276,0.99344134,0.000031403768,0.0016661357,0.0000042564425],"about_ca_topic_score_codex":0.00042820722,"about_ca_topic_score_gemma":0.0010283318,"teacher_disagreement_score":0.0010630763,"about_ca_system_score_codex":0.00016052133,"about_ca_system_score_gemma":0.00012620389,"threshold_uncertainty_score":0.0035563707},"labels":[],"label_agreement":null},{"id":"W4312194567","doi":"10.3390/cells11244068","title":"Proteomics and Phospho-Proteomics Profiling of the Co-Formulation of Type I and II Interferons, HeberFERON, in the Glioblastoma-Derived Cell Line U-87 MG","year":2022,"lang":"en","type":"article","venue":"Cells","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Max-Planck-Institut für Bildungsforschung","keywords":"Biology; Proteomics; Proteome; PI3K/AKT/mTOR pathway; Cell biology; Autophagy; Effector; Phosphorylation; Signal transduction; Translation (biology); Cell cycle; Context (archaeology); Molecular biology; Cell; Bioinformatics; Biochemistry; Messenger RNA; Gene; Apoptosis","score_opus":0.00997376011006752,"score_gpt":0.22513672601917925,"score_spread":0.21516296590911174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312194567","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937052,0.0024221323,0.001277378,0.0000787641,0.000027937815,0.000021990336,0.0014341875,0.000036305933,0.0009960632],"genre_scores_gemma":[0.98446816,0.0024792247,0.0043910495,0.00019625254,0.000017129478,0.00008161697,0.0037329185,0.000028377834,0.0046052085],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998847,0.000014619771,0.000007596509,0.000024028142,0.000043501874,0.00002544125],"domain_scores_gemma":[0.9999542,0.0000065418017,0.000012801974,0.000003768755,0.000012515975,0.0000102104295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012013729,0.0003182161,0.00030552305,0.00028868736,0.00018427237,0.000261084,0.00010421761,0.00020359753,0.000604767],"category_scores_gemma":[0.00009103466,0.00010836965,0.00024020803,0.00035949497,0.00010613829,0.00013135656,0.00012993316,0.0002260157,0.00024134482],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015365233,0.000015139912,0.00046969746,0.000029002353,0.000008975021,0.000033723074,0.000013003079,0.000034425088,0.9982039,0.000012383071,0.000044138742,0.000982089],"study_design_scores_gemma":[0.000010997357,0.0002975669,0.04553077,0.000011644683,0.00005785749,0.00030774204,0.000089413305,0.0011540183,0.9501746,0.000024412506,0.0023325656,0.00000847021],"about_ca_topic_score_codex":0.0010131627,"about_ca_topic_score_gemma":0.001516023,"teacher_disagreement_score":0.0010131627,"about_ca_system_score_codex":0.00021819794,"about_ca_system_score_gemma":0.00017250658,"threshold_uncertainty_score":0.0020231605},"labels":[],"label_agreement":null},{"id":"W4312406236","doi":"10.1161/atvb.42.suppl_1.396","title":"Abstract 396: <i>CHROMR</i> Coordinates Interferon Signaling And Lipid Metabolism In Viral Infection","year":2022,"lang":"en","type":"article","venue":"Arteriosclerosis Thrombosis and Vascular Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Berger (Canada)","funders":"","keywords":"Biology; Interferon; Viral replication; Repressor; Cell biology; Signal transduction; Influenza A virus; Transcription factor; Downregulation and upregulation; IRF1; Regulation of gene expression; Gene expression; Transcription (linguistics); Virus; Virology; Gene; Genetics","score_opus":0.019426230244323064,"score_gpt":0.25387880608223895,"score_spread":0.2344525758379159,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312406236","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87553155,0.020308975,0.020947227,0.0032677287,0.0019116717,0.00016404867,0.010442666,0.0034629605,0.06396317],"genre_scores_gemma":[0.96034676,0.0032765702,0.004503802,0.0013761113,0.00029240872,0.00006340001,0.004592178,0.0004567078,0.025092112],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997793,0.000021251211,0.00001015089,0.00008066393,0.00005996715,0.00004874407],"domain_scores_gemma":[0.99989486,0.000007822868,0.000032603275,0.000011407111,0.000017523736,0.000035725687],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014583628,0.00038448704,0.00028344957,0.00016265994,0.00032257332,0.000754181,0.0002606291,0.0004460266,0.0075078346],"category_scores_gemma":[0.00012948258,0.00015274371,0.00034260488,0.00017140068,0.00028522438,0.00029772762,0.0004918088,0.00051479635,0.0038542906],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016159004,0.000012425858,0.00059679284,0.00008613657,0.00000702631,0.000153465,0.000021081132,0.00007965851,0.99354714,0.0005398502,0.001420815,0.0033741188],"study_design_scores_gemma":[0.00006155339,0.0005132403,0.059086163,0.00010985089,0.00006631496,0.0019512915,0.0001787082,0.0047793244,0.86494666,0.0015240832,0.06673067,0.000052191182],"about_ca_topic_score_codex":0.0007681952,"about_ca_topic_score_gemma":0.0010271217,"teacher_disagreement_score":0.0075078346,"about_ca_system_score_codex":0.00057817524,"about_ca_system_score_gemma":0.00028112828,"threshold_uncertainty_score":0.025116205},"labels":[],"label_agreement":null},{"id":"W4312618176","doi":"10.2139/ssrn.4276974","title":"DNA-PKcs Is Required for cGAS/STING-Dependent Viral DNA Sensing in Human Cells","year":2022,"lang":"en","type":"article","venue":"SSRN Electronic Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Cancer Research","funders":"","keywords":"Sting; DNA; DNA-PKcs; Virology; Cell biology; Biology; DNA damage; Genetics; Physics","score_opus":0.011743091860433402,"score_gpt":0.255547328445021,"score_spread":0.24380423658458758,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312618176","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99280727,0.002129788,0.0017203136,0.00013100768,0.000053922984,0.000023238634,0.000832096,0.00014517513,0.002157167],"genre_scores_gemma":[0.99663526,0.0003049968,0.0007652923,0.000029687517,0.0000101783935,0.0000110206565,0.0009783179,0.000016036,0.0012491505],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979085,0.000039306953,0.0000276038,0.00004039365,0.000054691034,0.000047143876],"domain_scores_gemma":[0.99972636,0.00007210763,0.00006871974,0.00007198395,0.000027884296,0.000032923075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016598038,0.00018012914,0.00029245715,0.00022362395,0.00017936816,0.0005481709,0.00017869676,0.00023390667,0.0039992486],"category_scores_gemma":[0.00035900244,0.00016584464,0.0002777292,0.0002132388,0.00020823244,0.0001883862,0.00018016125,0.0003650697,0.0019188036],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000313536,0.000024106457,0.00065866945,0.00002751642,0.0000061264777,0.0001433188,0.000016850474,0.00003976492,0.99732864,0.00008988758,0.00005858084,0.0012928717],"study_design_scores_gemma":[0.000035812394,0.00027058471,0.020246232,0.00000860498,0.000022655671,0.0012184373,0.00007067595,0.0008182367,0.97395,0.00010946601,0.0032431018,0.0000062904246],"about_ca_topic_score_codex":0.00077679986,"about_ca_topic_score_gemma":0.00060483674,"teacher_disagreement_score":0.0039992486,"about_ca_system_score_codex":0.00034124835,"about_ca_system_score_gemma":0.00026822035,"threshold_uncertainty_score":0.013378859},"labels":[],"label_agreement":null},{"id":"W4313348201","doi":"10.4049/jimmunol.184.supp.39.7","title":"Structural Determinants of IFNα Distinguish Antiviral and Potentially Toxic Functions. (39.7)","year":2010,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Biology; STAT1; Interferon; Signal transduction; Innate immune system; Cytokine; Viral replication; Cell biology; Transcription factor; Receptor; STAT2; Mutant; stat; Virus; Immunology; Genetics; Gene","score_opus":0.008414754229155351,"score_gpt":0.24163432806138074,"score_spread":0.23321957383222539,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313348201","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9863317,0.00093192316,0.0059626843,0.000106776395,0.000058352387,0.000025966196,0.00036993783,0.00005102299,0.0061617154],"genre_scores_gemma":[0.9959549,0.00016970074,0.0013701922,0.000043102245,0.000009001918,0.000010085066,0.00039158115,0.000013085055,0.0020383305],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99992394,0.000013696257,0.000005570625,0.000013631207,0.000020830254,0.000022317785],"domain_scores_gemma":[0.9999306,0.0000129823775,0.000014754966,0.000008973149,0.000010126878,0.000022558797],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010199819,0.0002173197,0.00011698202,0.00008399476,0.00013552143,0.0002116687,0.0001581128,0.00023676976,0.0042505083],"category_scores_gemma":[0.000106140935,0.0000748433,0.00022549697,0.00007421723,0.0001935779,0.00012180026,0.0001607816,0.0003640519,0.0011675305],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014404647,0.000011032166,0.00033137493,0.00001281059,0.0000023378573,0.000060489892,0.0000075298085,0.00007710671,0.9972396,0.0006937076,0.000034092347,0.0013857776],"study_design_scores_gemma":[0.00002568888,0.00026546943,0.005938368,0.000010974048,0.000011530014,0.0006903948,0.000027983233,0.0012016706,0.9866911,0.0006616469,0.0044707214,0.0000045075603],"about_ca_topic_score_codex":0.000287676,"about_ca_topic_score_gemma":0.0003377631,"teacher_disagreement_score":0.0042505083,"about_ca_system_score_codex":0.00027521534,"about_ca_system_score_gemma":0.00015228344,"threshold_uncertainty_score":0.014219344},"labels":[],"label_agreement":null},{"id":"W4313373157","doi":"10.4049/jimmunol.204.supp.149.15","title":"Type III interferons are expressed in tuberculosis granulomas and promote an inflammatory phenotype in macrophages that differs from type I interferon","year":2020,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"École Nationale d'Administration Publique","funders":"","keywords":"Biology; Interferon; Immunology; Macrophage; CD11c; Cytokine; Interferon gamma; Mycobacterium tuberculosis; Interleukin 4; Phenotype; Tuberculosis; Gene; Medicine; In vitro; Pathology","score_opus":0.018560094025081214,"score_gpt":0.2373761336117671,"score_spread":0.21881603958668588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313373157","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99596643,0.0011501405,0.0012559289,0.00006617529,0.000021006921,0.000023625655,0.00044660782,0.000032690798,0.0010373475],"genre_scores_gemma":[0.9953485,0.00055072014,0.0019202051,0.00012797136,0.000017188426,0.000060359293,0.0005351897,0.000011283438,0.001428445],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998293,0.000023756447,0.000015864312,0.00003255692,0.00004421618,0.0000543152],"domain_scores_gemma":[0.99991345,0.000013969536,0.000033170163,0.0000071618824,0.000014786775,0.000017511868],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013050894,0.00024099718,0.0001767384,0.00034909646,0.00021555013,0.00021838986,0.000057945264,0.00021521005,0.0011066293],"category_scores_gemma":[0.000095867275,0.00011223592,0.00027015855,0.0001989639,0.00018922187,0.00013464091,0.00018771329,0.0003544232,0.00023703651],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010710442,0.0000124196795,0.0023279774,0.000038921014,0.000004720034,0.000113573304,0.000026613732,0.000018246592,0.99635434,0.000033126034,0.000030293162,0.0009326712],"study_design_scores_gemma":[0.000036582023,0.00058532215,0.1992245,0.00008397764,0.000072169765,0.001925505,0.0006781437,0.0014598402,0.78988934,0.0004914823,0.0055388263,0.000014347656],"about_ca_topic_score_codex":0.00024006539,"about_ca_topic_score_gemma":0.00041503223,"teacher_disagreement_score":0.0011066293,"about_ca_system_score_codex":0.00013868677,"about_ca_system_score_gemma":0.00012167628,"threshold_uncertainty_score":0.0037019849},"labels":[],"label_agreement":null},{"id":"W4313373164","doi":"10.4049/jimmunol.204.supp.162.4","title":"STING pathway mediated immunologic consequences of DNA damage repair gene losses in high-grade serous ovarian tumors","year":2020,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; The King's University; Queen's University","funders":"","keywords":"Cancer research; Immune system; PTEN; Biology; Tumor microenvironment; CXCL10; Immune checkpoint; Chemokine; CD8; DNA damage; Immunology; Immunotherapy; Signal transduction; PI3K/AKT/mTOR pathway; Cell biology","score_opus":0.022097567425084653,"score_gpt":0.23643051202975576,"score_spread":0.21433294460467112,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313373164","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993261,0.00018357327,0.00016957251,0.00001507235,0.0000048626093,0.0000069057264,0.000082186154,0.000010876994,0.00020080585],"genre_scores_gemma":[0.99921846,0.000113928145,0.00013486687,0.000010868699,0.0000023409932,0.000009690183,0.00011091752,0.0000018357309,0.0003971378],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999267,0.000014774833,0.000007345326,0.000010095096,0.000015656793,0.00002537592],"domain_scores_gemma":[0.99990916,0.0000127306375,0.000031633703,0.0000070954657,0.0000045386946,0.000034904126],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010174435,0.000181909,0.0001391297,0.00026059285,0.00006469639,0.00014416112,0.0000777088,0.00016367635,0.0011848853],"category_scores_gemma":[0.000065255714,0.00008031484,0.00013046329,0.00009374401,0.00017983945,0.00012957769,0.00010886971,0.00042330087,0.00010876533],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004034114,0.00006822551,0.0014596763,0.000024770186,0.000003509553,0.0001014148,0.000014450499,0.000059712063,0.99702376,0.00004168188,0.000020967644,0.0007784342],"study_design_scores_gemma":[0.0000620296,0.002572923,0.046844408,0.00000834177,0.000028076067,0.0010663955,0.000086897046,0.0014955478,0.9467446,0.00008857342,0.0009977148,0.0000043863856],"about_ca_topic_score_codex":0.00018402094,"about_ca_topic_score_gemma":0.00024281301,"teacher_disagreement_score":0.0011848853,"about_ca_system_score_codex":0.00013705555,"about_ca_system_score_gemma":0.000080184676,"threshold_uncertainty_score":0.003963828},"labels":[],"label_agreement":null},{"id":"W4313379411","doi":"10.4049/jimmunol.196.supp.201.4","title":"Ankyrin Repeat Domain 22 Mediates Host Defense Against Viral Infection Through STING Signaling Pathway","year":2016,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish Rehabilitation Hospital","funders":"","keywords":"Biology; Interferon; Innate immune system; Virus; Virology; Herpes simplex virus; Sting; Immune system; Viral replication; Antiviral protein; Peripheral blood mononuclear cell; RNA; Immunology; In vitro; Gene; Genetics","score_opus":0.012654498015225932,"score_gpt":0.23609410454770338,"score_spread":0.22343960653247746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313379411","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99147964,0.0044790497,0.00227561,0.00013382988,0.000036130292,0.00001765469,0.00025166894,0.00007426404,0.0012520447],"genre_scores_gemma":[0.99702376,0.00068087166,0.0005592955,0.00003790523,0.000010781418,0.000015391179,0.0003092999,0.000004746587,0.0013579106],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989057,0.000025523976,0.000008112946,0.000017535698,0.000018828816,0.000039433544],"domain_scores_gemma":[0.9999393,0.0000056160843,0.000017786522,0.0000059525305,0.000006558133,0.000024745506],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009893908,0.00036159056,0.00022368877,0.00014720154,0.0001743326,0.00026550508,0.00012306179,0.00022232774,0.0015732873],"category_scores_gemma":[0.000070538095,0.00007941398,0.00023992444,0.000078288365,0.00014246079,0.00019917687,0.00025615463,0.00047256134,0.0004568959],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001509995,0.000014841872,0.00052022125,0.00006173224,0.00000732221,0.00018171544,0.000010660481,0.000082231236,0.9979499,0.00008863361,0.00008951853,0.0008422442],"study_design_scores_gemma":[0.00003359107,0.0004023967,0.02563248,0.00002557956,0.000039282913,0.0012196304,0.0001162969,0.0038514922,0.96181554,0.00026249405,0.0065873484,0.000013812988],"about_ca_topic_score_codex":0.00023612051,"about_ca_topic_score_gemma":0.00023558576,"teacher_disagreement_score":0.0015732873,"about_ca_system_score_codex":0.00020530209,"about_ca_system_score_gemma":0.00013156001,"threshold_uncertainty_score":0.0052632093},"labels":[],"label_agreement":null},{"id":"W4313382980","doi":"10.4049/jimmunol.204.supp.93.18","title":"Expression of chemokines and cytokines in influenza A and B patients have a significant correlation to the levels of serum miRNAs","year":2020,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Chemokine; microRNA; Immunology; Influenza A virus; Biology; Immune system; Virus; CD8; Virology; Gene","score_opus":0.02559914666396604,"score_gpt":0.2571117250517253,"score_spread":0.23151257838775927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313382980","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987668,0.00047001208,0.00014541936,0.000023563283,0.000009867084,0.000008410486,0.00022640769,0.0000044759945,0.00034505193],"genre_scores_gemma":[0.999037,0.0000984374,0.00027134476,0.000024847035,0.000013593983,0.000019675655,0.00023936524,0.0000020994369,0.00029373745],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99983406,0.000027814367,0.000029018069,0.0000494396,0.000028191553,0.000031400737],"domain_scores_gemma":[0.9996076,0.00007367115,0.00016086902,0.000019010571,0.000048170074,0.00009070154],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014783535,0.00025283123,0.0002394105,0.0003393264,0.00018964469,0.00025393354,0.000073545176,0.00034163863,0.0018161901],"category_scores_gemma":[0.0005102321,0.00015105058,0.00022432416,0.00027177812,0.0001369692,0.00018019853,0.00016990837,0.00038648339,0.0002700182],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0032112997,0.00011441039,0.915774,0.000079338315,0.00012281949,0.00055204297,0.0001492463,0.00007530831,0.07310297,0.000049058806,0.00023167321,0.0065378007],"study_design_scores_gemma":[0.000019676518,0.0004666588,0.9948689,0.000008678876,0.000033655797,0.0009785303,0.00011904975,0.00024733145,0.002814306,0.000030494715,0.00040707926,0.00000562323],"about_ca_topic_score_codex":0.00029227565,"about_ca_topic_score_gemma":0.00025088785,"teacher_disagreement_score":0.0018161901,"about_ca_system_score_codex":0.000106679836,"about_ca_system_score_gemma":0.000085506166,"threshold_uncertainty_score":0.00607574},"labels":[],"label_agreement":null},{"id":"W4313386171","doi":"10.4049/jimmunol.194.supp.64.6","title":"Tumour necrosis factor-related apoptosis inducing ligand promotes the development of experimental chronic obstructive pulmonary disease (MUC1P.905)","year":2015,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"COPD; Medicine; Pathogenesis; Lung; Immunology; Tumor necrosis factor alpha; Inflammation; Fibrosis; Cytokine; Pathology; Internal medicine","score_opus":0.022464377648225314,"score_gpt":0.2565481804691133,"score_spread":0.234083802820888,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313386171","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99477166,0.0017553101,0.0009745977,0.00025807772,0.00009025507,0.000040920877,0.0005564515,0.00007714421,0.0014755813],"genre_scores_gemma":[0.9952366,0.0006662653,0.00064264704,0.00012065536,0.0000145116455,0.0000579756,0.00067001546,0.0000121005605,0.0025793414],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99963343,0.00006697882,0.000040144143,0.000043203723,0.00009535183,0.00012091434],"domain_scores_gemma":[0.99971193,0.000033733013,0.00008075955,0.000039859377,0.000026480782,0.000107140135],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035468562,0.00034539393,0.00031674025,0.0004535619,0.00018607755,0.00036380056,0.0001604563,0.00048673863,0.002573781],"category_scores_gemma":[0.00022114697,0.00017790147,0.00043380682,0.00021093152,0.00032555,0.00026296213,0.0003278677,0.0012066994,0.00056978787],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010461473,0.0002896954,0.0008591147,0.0000913337,0.000011619642,0.00018206764,0.00002012285,0.00006201508,0.9951304,0.00017904487,0.00018471833,0.001943587],"study_design_scores_gemma":[0.00028267747,0.0048696855,0.031968307,0.00004481608,0.000046420464,0.0014976502,0.000116983276,0.0016090871,0.954627,0.00022787564,0.0046976865,0.0000117454965],"about_ca_topic_score_codex":0.00060567237,"about_ca_topic_score_gemma":0.00052710524,"teacher_disagreement_score":0.002573781,"about_ca_system_score_codex":0.00037916147,"about_ca_system_score_gemma":0.00031370047,"threshold_uncertainty_score":0.008610189},"labels":[],"label_agreement":null},{"id":"W4313405865","doi":"10.4049/jimmunol.208.supp.111.03","title":"MEF2A is a Regulator of Interferon-Mediated Inflammation","year":2022,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Stimulator of interferon genes; Interferon; Biology; Regulator; DNA damage; Inflammation; Nucleic acid; Transcription factor; DNA replication; DNA; Cell biology; Viral replication; Cancer research; Innate immune system; Immune system; Immunology; Gene; Virus; Genetics","score_opus":0.009070739307627081,"score_gpt":0.22563963485950778,"score_spread":0.2165688955518807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313405865","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91865325,0.042966142,0.01867184,0.0010388341,0.00062730006,0.0000732586,0.0023980662,0.00038099705,0.015190338],"genre_scores_gemma":[0.98387516,0.003070093,0.0020792533,0.00013427471,0.00008972879,0.00004034281,0.0009135863,0.000018765551,0.009778794],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986744,0.000026462356,0.00001243933,0.000033766588,0.000037425787,0.00002254008],"domain_scores_gemma":[0.99989855,0.000010283464,0.000027104508,0.000010054803,0.000019933608,0.000034141514],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001828069,0.00035844263,0.00018848323,0.00020154536,0.00025073718,0.00039416229,0.0001991444,0.00033568518,0.0023990555],"category_scores_gemma":[0.000110840614,0.000088585286,0.00017709703,0.00011847745,0.00016969498,0.00015223655,0.0002051074,0.0003620633,0.00071681145],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001355362,0.00002113118,0.00094747654,0.000056955523,0.000009018894,0.00007526149,0.0000061699257,0.000046326506,0.99599236,0.0002443002,0.0003254369,0.0021400382],"study_design_scores_gemma":[0.000052209638,0.00041499603,0.05549494,0.000067251676,0.000046061443,0.0015362984,0.000080121805,0.0027344928,0.8920794,0.00062838715,0.046848506,0.000017297984],"about_ca_topic_score_codex":0.00017231047,"about_ca_topic_score_gemma":0.00025296793,"teacher_disagreement_score":0.0023990555,"about_ca_system_score_codex":0.00019461337,"about_ca_system_score_gemma":0.00012389412,"threshold_uncertainty_score":0.008025646},"labels":[],"label_agreement":null},{"id":"W4313824424","doi":"10.3389/fimmu.2022.1087991","title":"Intratumoral STING activation causes durable immunogenic tumor eradication in the KP soft tissue sarcoma model","year":2023,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; Alberta Bone and Joint Health Institute; University of Calgary","funders":"Canadian Institutes of Health Research; Cancer Research Society; Alberta Cancer Foundation; University of Calgary","keywords":"Sting; Immune system; Cancer research; Sarcoma; Medicine; Soft tissue sarcoma; Tumor microenvironment; Immunology; Immunotherapy; Pathology","score_opus":0.015587006202110978,"score_gpt":0.25283167850886534,"score_spread":0.23724467230675436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313824424","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995141,0.0007613549,0.002159594,0.000053718235,0.000027208542,0.000049980637,0.00031318527,0.00012859769,0.0013654098],"genre_scores_gemma":[0.99556327,0.00046206434,0.0013952262,0.000020962561,0.000009164575,0.000043882315,0.0003544952,0.000014747752,0.0021361972],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986637,0.000018249197,0.000013388514,0.00002697841,0.00003756277,0.00003749813],"domain_scores_gemma":[0.9998671,0.000018368552,0.000050645955,0.00002011305,0.000008635843,0.00003518036],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017048074,0.00040217975,0.00023073055,0.00036302934,0.000113959264,0.0001872235,0.00020006477,0.0002309304,0.0012525563],"category_scores_gemma":[0.000080207006,0.00010159001,0.00017817257,0.00016862623,0.00025529566,0.00021371266,0.00014892692,0.0006775125,0.00029417386],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027279236,0.00019682893,0.00019918878,0.000035896563,0.000005469801,0.000049348124,0.000020615606,0.000097163735,0.99655837,0.00008567011,0.000061166895,0.0024174554],"study_design_scores_gemma":[0.000018483974,0.0015722191,0.0018293656,0.0000057589373,0.0000141528135,0.00018730333,0.000015841453,0.0005887652,0.9949439,0.000022652308,0.0007989083,0.0000026337789],"about_ca_topic_score_codex":0.00042327365,"about_ca_topic_score_gemma":0.00071532,"teacher_disagreement_score":0.0012525563,"about_ca_system_score_codex":0.0002003194,"about_ca_system_score_gemma":0.00019751395,"threshold_uncertainty_score":0.004190266},"labels":[],"label_agreement":null},{"id":"W4315797345","doi":"10.3389/fimmu.2022.1050250","title":"CRISPR-mediated rapid arming of poxvirus vectors enables facile generation of the novel immunotherapeutic STINGPOX","year":2023,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Public Health Agency of Canada; McMaster University Medical Centre; Ottawa Hospital; University of Ottawa","funders":"Canadian Institutes of Health Research; Terry Fox Research Institute; Prostate Cancer Canada","keywords":"Oncolytic virus; Vaccinia; CRISPR; Cas9; Biology; Genome editing; Virus; Poxviridae; Virology; Vector (molecular biology); Viral vector; Cancer immunotherapy; Computational biology; Immunotherapy; Recombinant DNA; Immune system; Immunology; Gene; Genetics","score_opus":0.029797252871888263,"score_gpt":0.2442852156093432,"score_spread":0.21448796273745493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4315797345","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87608606,0.0018153571,0.115623504,0.00025571807,0.0001257885,0.00024852384,0.00057369674,0.00091977825,0.0043516955],"genre_scores_gemma":[0.9439459,0.0012512198,0.047542583,0.000078501915,0.000021028898,0.00012931452,0.0007248618,0.000088914974,0.0062176785],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998913,0.000012529853,0.00001126477,0.000030659598,0.00003724239,0.00001699044],"domain_scores_gemma":[0.9999293,0.000017191667,0.000024905803,0.000013501116,0.0000045229713,0.0000105311465],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001504685,0.0002804756,0.0001905706,0.00016570349,0.00012157086,0.0003380239,0.00020847599,0.00037119235,0.00096997136],"category_scores_gemma":[0.00015352828,0.00019043346,0.00026225133,0.00008319149,0.00025114394,0.00025234523,0.00028015033,0.00065608113,0.00035627605],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016248632,0.000010246534,0.00007804134,0.000023013206,0.0000029230039,0.000050823845,0.000012184179,0.00019303981,0.9963961,0.00042047666,0.00004512764,0.0027516687],"study_design_scores_gemma":[0.000007967689,0.00012309644,0.00065084954,0.000004364414,0.000006949489,0.0003238999,0.00000696453,0.0023648732,0.99023485,0.00012789939,0.0061430326,0.000005326275],"about_ca_topic_score_codex":0.0001700904,"about_ca_topic_score_gemma":0.00025255754,"teacher_disagreement_score":0.00096997136,"about_ca_system_score_codex":0.00018904694,"about_ca_system_score_gemma":0.000183354,"threshold_uncertainty_score":0.0032448769},"labels":[],"label_agreement":null},{"id":"W4315928834","doi":"10.1093/plcell/koad003","title":"Convergent evolution of elicitin perception by divergent pattern-recognition receptors","year":2023,"lang":"en","type":"letter","venue":"The Plant Cell","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Biology; Perception; Receptor; Convergent evolution; Neuroscience; Biochemistry; Phylogenetics","score_opus":0.020850969085278368,"score_gpt":0.20778933629376303,"score_spread":0.18693836720848467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4315928834","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07441992,0.016499043,0.0025408515,0.8486461,0.033535406,0.000036010362,0.00018771771,0.000108682274,0.024026332],"genre_scores_gemma":[0.4406775,0.016723773,0.0023087612,0.43575305,0.06950677,0.000100731326,0.00018324553,0.00009589839,0.034650214],"study_design_codex":"not_applicable","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9996792,0.00010070585,0.00002462221,0.000042311396,0.00009734382,0.00005579573],"domain_scores_gemma":[0.99892634,0.0006984661,0.00006300899,0.00008024791,0.00012772634,0.00010419214],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001015007,0.00024255917,0.0004038038,0.00019846123,0.00046090607,0.0010717472,0.0004948949,0.005589159,0.0017459508],"category_scores_gemma":[0.0021237482,0.00017107313,0.0002871986,0.00015425331,0.0009858481,0.00071046484,0.00048376952,0.004579295,0.00097067177],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0059496174,0.0003526682,0.009108376,0.0004470527,0.00016973846,0.022188839,0.00077887333,0.0011772757,0.10295957,0.04731313,0.6021516,0.20740323],"study_design_scores_gemma":[0.00093429274,0.0004562055,0.016644787,0.00019729853,0.00011088575,0.011908684,0.0008360638,0.004683586,0.040805668,0.05585652,0.8674554,0.00011058066],"about_ca_topic_score_codex":0.0004716424,"about_ca_topic_score_gemma":0.0007259453,"teacher_disagreement_score":0.005589159,"about_ca_system_score_codex":0.0009105049,"about_ca_system_score_gemma":0.000255414,"threshold_uncertainty_score":0.006606221},"labels":[],"label_agreement":null},{"id":"W4317735710","doi":"10.3390/v15020301","title":"Differential Cellular Sensing of Fusion from within and Fusion from without during Virus Infection","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; St. Joseph’s Healthcare Hamilton; McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Nucleic acid; Innate immune system; RNA; Biology; Lipid bilayer fusion; Cell fusion; Endogeny; Fusion protein; Cell biology; Fusion; RIG-I; DNA; Fusion gene; Virus; Virology; Biochemistry; Immune system; Cell; Gene; Genetics; Recombinant DNA","score_opus":0.019073338990950494,"score_gpt":0.2468375495991336,"score_spread":0.2277642106081831,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4317735710","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933675,0.0005618826,0.004893962,0.000045827714,0.000019143556,0.000016115233,0.00010069207,0.000027706936,0.0009671289],"genre_scores_gemma":[0.99588,0.0003390455,0.0026904838,0.000042676867,0.000008089911,0.000021032118,0.00018089102,0.000015320245,0.00082247384],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99966836,0.000074141244,0.000018946745,0.000067183006,0.00009605823,0.000075344],"domain_scores_gemma":[0.9998703,0.00004826694,0.000029400808,0.000019167375,0.00001669689,0.000016119411],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025029865,0.0002758666,0.0003948061,0.00012504218,0.00015964228,0.0005078248,0.00019210987,0.00039623282,0.0006133772],"category_scores_gemma":[0.0002412512,0.0001265408,0.00028324453,0.000107353764,0.0002906944,0.00054671086,0.00041871445,0.0005626048,0.00016588734],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047268255,0.000004079322,0.000059046564,0.000012462574,0.0000017063705,0.000017032387,0.000009949343,0.00003513697,0.9994885,0.00009523061,0.0000050585245,0.00022453663],"study_design_scores_gemma":[0.0000035863613,0.000079378,0.0013673014,0.0000032316323,0.0000040202667,0.000111573536,0.000032348962,0.0006571583,0.99723405,0.00006699116,0.00043588405,0.0000044720505],"about_ca_topic_score_codex":0.00020007297,"about_ca_topic_score_gemma":0.00020401416,"teacher_disagreement_score":0.0006133772,"about_ca_system_score_codex":0.00031451441,"about_ca_system_score_gemma":0.00011669992,"threshold_uncertainty_score":0.0022820234},"labels":[],"label_agreement":null},{"id":"W4319312920","doi":"10.1016/j.cell.2022.12.041","title":"Bacteriophages inhibit and evade cGAS-like immune function in bacteria","year":2023,"lang":"en","type":"article","venue":"Cell","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":133,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; Tsinghua University; National Natural Science Foundation of China; Searle Scholars Program; Chinese Academy of Sciences; European Molecular Biology Organization; University of Ottawa; Institute of Biophysics, Chinese Academy of Sciences; Broad Institute; National Science Foundation; Vallee Foundation; Damon Runyon Cancer Research Foundation; National Institutes of Health","keywords":"Biology; Bacteria; Immune system; Function (biology); Bacteriophage; Microbiology; Virology; Cell biology; Genetics; Escherichia coli; Gene","score_opus":0.009608664159085688,"score_gpt":0.2180055707432726,"score_spread":0.20839690658418691,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319312920","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916658,0.0027929246,0.0029081951,0.000088395835,0.000031402786,0.000017745382,0.00006592047,0.000091473245,0.0023381591],"genre_scores_gemma":[0.99576217,0.000611157,0.0014550146,0.000067327805,0.000011146662,0.000016861723,0.00008453679,0.00001113474,0.0019805226],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998715,0.00002789606,0.0000072335797,0.000016452852,0.000043073538,0.000033820128],"domain_scores_gemma":[0.99993753,0.000013608636,0.000015924588,0.000008055803,0.0000075503094,0.000017314454],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000115253286,0.0003419632,0.000174449,0.00014368382,0.00009425863,0.00022359921,0.00010931192,0.00023628716,0.0006855841],"category_scores_gemma":[0.00008739168,0.00008266686,0.0001431191,0.000064801665,0.00020783988,0.000119708566,0.00019058134,0.00034623776,0.00026064157],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026434134,0.000008205783,0.000095698706,0.00001309642,9.638574e-7,0.000013659756,0.000003951668,0.000016034779,0.9991774,0.00007454814,0.000012917761,0.0005571079],"study_design_scores_gemma":[0.000011925852,0.00020788317,0.004071294,0.0000053800177,0.000004729123,0.00018415935,0.000017464772,0.0005044491,0.99311584,0.00007730978,0.0017969209,0.0000026080083],"about_ca_topic_score_codex":0.0001919806,"about_ca_topic_score_gemma":0.00029779432,"teacher_disagreement_score":0.0006855841,"about_ca_system_score_codex":0.0001958481,"about_ca_system_score_gemma":0.00012547025,"threshold_uncertainty_score":0.0022934675},"labels":[],"label_agreement":null},{"id":"W4319318454","doi":"10.3390/ijms24033029","title":"How the Innate Immune DNA Sensing cGAS-STING Pathway Is Involved in Apoptosis","year":2023,"lang":"en","type":"review","venue":"International Journal of Molecular Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Higher Education Discipline Innovation Project; Priority Academic Program Development of Jiangsu Higher Education Institutions; National Natural Science Foundation of China","keywords":"Innate immune system; IRF3; Sting; Cell biology; Apoptosis; Biology; Signal transduction; Stimulator of interferon genes; Caspase; Immune system; Immunology; Programmed cell death; Genetics","score_opus":0.062471196367600804,"score_gpt":0.3254640250510568,"score_spread":0.262992828683456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319318454","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00030901475,0.99781513,0.00016360785,0.00020913154,0.00024609355,0.0000051112506,0.000015436026,0.00000966064,0.0012268476],"genre_scores_gemma":[0.0012529669,0.9975707,0.00015312346,0.00013844427,0.00014414308,0.000006476496,0.00002923271,0.0000013286733,0.000703718],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99990785,0.000012593662,0.000015437585,0.000016561793,0.00003530128,0.0000122081055],"domain_scores_gemma":[0.99991894,0.000026779928,0.000014571885,0.0000029673267,0.000025271878,0.000011481734],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023473597,0.0005565383,0.0007458026,0.001352814,0.00021600646,0.0006682751,0.00046614927,0.0006556857,0.0019912517],"category_scores_gemma":[0.0002487404,0.00020649511,0.0003607224,0.0011429584,0.0002525763,0.00090052903,0.0004138403,0.0010810797,0.0012780585],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011022704,0.00006218315,0.00021294833,0.016061345,0.000070290385,0.00032073143,0.00007309949,0.0003751143,0.006760937,0.003909357,0.024874208,0.94716954],"study_design_scores_gemma":[0.000020760948,0.00013678282,0.0014218966,0.0023879076,0.00009925296,0.0025752133,0.000054710647,0.00015499377,0.0020718763,0.0021422405,0.988915,0.000019394083],"about_ca_topic_score_codex":0.0004607936,"about_ca_topic_score_gemma":0.00078337983,"teacher_disagreement_score":0.0019912517,"about_ca_system_score_codex":0.00047436683,"about_ca_system_score_gemma":0.00070179376,"threshold_uncertainty_score":0.0066613555},"labels":[],"label_agreement":null},{"id":"W4319433354","doi":"10.4049/jimmunol.206.supp.67.03","title":"STING pathway mediated immunologic consequences of DNA damage repair gene losses in high-grade serous ovarian tumors","year":2021,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Queen's University","funders":"","keywords":"Cancer research; Immune system; PTEN; Biology; Tumor microenvironment; CXCL10; Chemokine; Immune checkpoint; CD8; DNA damage; Immunology; Immunotherapy; Signal transduction; PI3K/AKT/mTOR pathway; Cell biology","score_opus":0.01739719742641395,"score_gpt":0.23952998796068517,"score_spread":0.2221327905342712,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319433354","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993261,0.00018357327,0.00016957251,0.00001507235,0.0000048626093,0.0000069057264,0.000082186154,0.000010876994,0.00020080585],"genre_scores_gemma":[0.99921846,0.000113928145,0.00013486687,0.000010868699,0.0000023409932,0.000009690183,0.00011091752,0.0000018357309,0.0003971378],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999267,0.000014774833,0.000007345326,0.000010095096,0.000015656793,0.00002537592],"domain_scores_gemma":[0.99990916,0.0000127306375,0.000031633703,0.0000070954657,0.0000045386946,0.000034904126],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010174435,0.000181909,0.0001391297,0.00026059285,0.00006469639,0.00014416112,0.0000777088,0.00016367635,0.0011848853],"category_scores_gemma":[0.000065255714,0.00008031484,0.00013046329,0.00009374401,0.00017983945,0.00012957769,0.00010886971,0.00042330087,0.00010876533],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004034114,0.00006822551,0.0014596763,0.000024770186,0.000003509553,0.0001014148,0.000014450499,0.000059712063,0.99702376,0.00004168188,0.000020967644,0.0007784342],"study_design_scores_gemma":[0.0000620296,0.002572923,0.046844408,0.00000834177,0.000028076067,0.0010663955,0.000086897046,0.0014955478,0.9467446,0.00008857342,0.0009977148,0.0000043863856],"about_ca_topic_score_codex":0.00018402094,"about_ca_topic_score_gemma":0.00024281301,"teacher_disagreement_score":0.0011848853,"about_ca_system_score_codex":0.00013705555,"about_ca_system_score_gemma":0.000080184676,"threshold_uncertainty_score":0.003963828},"labels":[],"label_agreement":null},{"id":"W4319433506","doi":"10.4049/jimmunol.206.supp.105.07","title":"Ageing promotes non-remitting experimental autoimmune encephalomyelitis with persistent meningeal inflammation and subpial demyelination in A/T SJL/J mice","year":2021,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Experimental autoimmune encephalomyelitis; Multiple sclerosis; Adoptive cell transfer; Inflammation; Microglia; Pathology; Medicine; Immunology; Meninges; Encephalomyelitis; Demyelinating disease; T cell; Immune system","score_opus":0.008838416798930536,"score_gpt":0.23208244264610167,"score_spread":0.22324402584717112,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319433506","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963348,0.000960489,0.0010593816,0.00008524328,0.000032258267,0.000041191994,0.0006044392,0.0001119312,0.0007702591],"genre_scores_gemma":[0.9924725,0.00093384576,0.0015640361,0.00015755251,0.00004334757,0.00008752008,0.0005867916,0.000055571756,0.004098883],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997292,0.000037554535,0.000046017165,0.0000700186,0.000052298765,0.00006485934],"domain_scores_gemma":[0.99930274,0.0000397442,0.0003107045,0.0000476008,0.00004049683,0.0002587301],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038784347,0.0006544231,0.0003879753,0.0009918886,0.00025584464,0.00040641538,0.0002636485,0.00065427466,0.0015298926],"category_scores_gemma":[0.00015523497,0.0003554747,0.00052882254,0.00020978306,0.00032592515,0.00041093628,0.00029121424,0.00090371794,0.0006605413],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034022803,0.00016510588,0.0006269232,0.000026400417,0.0000077226205,0.00012709187,0.000036585774,0.000034652065,0.9980677,0.00006045652,0.000027569053,0.00047961707],"study_design_scores_gemma":[0.00032104025,0.011704044,0.13220647,0.000091956426,0.00018426792,0.0031988672,0.0003563347,0.0023595754,0.84176445,0.00058430247,0.0071672727,0.00006141951],"about_ca_topic_score_codex":0.00048552567,"about_ca_topic_score_gemma":0.0009453709,"teacher_disagreement_score":0.0015298926,"about_ca_system_score_codex":0.0002529947,"about_ca_system_score_gemma":0.00017493004,"threshold_uncertainty_score":0.0051180124},"labels":[],"label_agreement":null},{"id":"W4319441578","doi":"10.20944/preprints202302.0099.v1","title":"Manganese Mediates its Antiviral Functions in a cGAS-STING Pathway Independent Manner","year":2023,"lang":"en","type":"preprint","venue":"Preprints.org","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; University of Saskatchewan","funders":"Higher Education Discipline Innovation Project; Priority Academic Program Development of Jiangsu Higher Education Institutions; National Natural Science Foundation of China","keywords":"Sting; Innate immune system; Virus; DNA virus; Biology; RNA interference; Immune system; Virology; CRISPR; Cell biology; RNA; Gene; Immunology; Genome; Genetics","score_opus":0.11984498148333764,"score_gpt":0.3301159635726929,"score_spread":0.21027098208935527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319441578","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9482589,0.00825639,0.019796567,0.0011454383,0.00059902365,0.000122015605,0.0019094772,0.000831915,0.019080348],"genre_scores_gemma":[0.98112947,0.0017931047,0.003418081,0.00012432573,0.000043008215,0.00003948082,0.00089308433,0.00006013754,0.012499209],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984765,0.000021162237,0.000008257856,0.000041233405,0.00004338509,0.000038378013],"domain_scores_gemma":[0.99994445,0.0000052275886,0.000014031575,0.000008682577,0.000011441234,0.000016121347],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013926814,0.00040221962,0.0002684104,0.00018181432,0.00020294786,0.00046825444,0.00018194108,0.00033518934,0.0024115546],"category_scores_gemma":[0.000116081836,0.000105531064,0.0003463119,0.00009708467,0.00023047288,0.0002668969,0.00032847622,0.0006158456,0.0006402139],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014290925,0.000015572483,0.00025429652,0.00010547371,0.000009089242,0.000076137985,0.000014354502,0.00004424771,0.9970047,0.00036036057,0.00019592092,0.0017770027],"study_design_scores_gemma":[0.000025973572,0.00014629228,0.0038352148,0.000017731685,0.000022257365,0.0002702062,0.00003867313,0.0009939275,0.9822098,0.00031917085,0.012113562,0.0000070880187],"about_ca_topic_score_codex":0.00069477677,"about_ca_topic_score_gemma":0.0010044273,"teacher_disagreement_score":0.0024115546,"about_ca_system_score_codex":0.00042383707,"about_ca_system_score_gemma":0.00034101907,"threshold_uncertainty_score":0.008067429},"labels":[],"label_agreement":null},{"id":"W4319655799","doi":"10.1371/journal.pbio.3001967","title":"Fibroblast-expressed LRRC15 is a receptor for SARS-CoV-2 spike and controls antiviral and antifibrotic transcriptional programs","year":2023,"lang":"en","type":"article","venue":"PLoS Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Health and Medical Research Council; University of Sydney; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Biology; Spike (software development); Virology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); 2019-20 coronavirus outbreak; Receptor; Genetics; Coronavirus disease 2019 (COVID-19); Computational biology; Fibroblast; Cell culture; Internal medicine; Infectious disease (medical specialty)","score_opus":0.04523182525653455,"score_gpt":0.28408502033430255,"score_spread":0.238853195077768,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319655799","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98287934,0.0025441302,0.008643046,0.00019016847,0.000057598707,0.000036033558,0.0009197118,0.00023814604,0.004491659],"genre_scores_gemma":[0.9911465,0.0007642484,0.0034928566,0.00009348577,0.000010782153,0.000019867817,0.00094473123,0.000028504479,0.003499001],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998118,0.000022461836,0.0000128752745,0.000047817193,0.000060977647,0.00004408001],"domain_scores_gemma":[0.9999405,0.0000070899728,0.000020788388,0.000007946376,0.000008415007,0.000015204281],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012792741,0.00028852143,0.00022717327,0.00015347778,0.00015954366,0.00030906324,0.00012870584,0.00022943076,0.0012540503],"category_scores_gemma":[0.00008064616,0.000118257696,0.00023083376,0.00009330986,0.00017624194,0.00014703712,0.00022410888,0.00033237477,0.000526598],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040418126,0.000005350568,0.00025027938,0.000018301413,0.0000018854764,0.000050701878,0.000007414486,0.00003476639,0.9985475,0.00009521483,0.000036677302,0.0009113414],"study_design_scores_gemma":[0.000017259734,0.0001740404,0.012931507,0.000010076792,0.0000145523645,0.0006788023,0.00007423599,0.0016422961,0.97654474,0.00011674551,0.007786702,0.00000906374],"about_ca_topic_score_codex":0.00036951987,"about_ca_topic_score_gemma":0.00073628325,"teacher_disagreement_score":0.0012540503,"about_ca_system_score_codex":0.0002883413,"about_ca_system_score_gemma":0.00018615104,"threshold_uncertainty_score":0.0041952133},"labels":[],"label_agreement":null},{"id":"W4320506938","doi":"","title":"MiR-181a-5p inhibits uveal melanoma development by targeting GNAQ and AKT3.","year":2023,"lang":"en","type":"article","venue":"PubMed","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; Université Laval; Centre hospitalier de l'Université Laval; Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Université de Montréal","keywords":"GNAQ; AKT3; Cancer research; microRNA; Melanoma; Gene silencing; Cell growth; PI3K/AKT/mTOR pathway; Phosphorylation; Apoptosis; AKT1; Protein kinase B; Biology; Medicine; Mutation; Cell biology; Genetics; Gene","score_opus":0.014338616457856324,"score_gpt":0.20452304951567601,"score_spread":0.19018443305781968,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4320506938","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9651672,0.014292234,0.008725114,0.000787749,0.00048785805,0.00025344294,0.0010145286,0.0008540177,0.008417827],"genre_scores_gemma":[0.9879121,0.0036209694,0.0044731656,0.00030154662,0.000033867622,0.00014717065,0.00088522205,0.000039627823,0.0025862851],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981993,0.000028457109,0.000027082278,0.000030499874,0.00005289447,0.000041149535],"domain_scores_gemma":[0.9999429,0.000008800455,0.000019246563,0.0000061456426,0.000008856741,0.000014183447],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002035234,0.00053392537,0.00037646215,0.0003475858,0.00029113764,0.00033200075,0.00027354507,0.0004440814,0.0012343269],"category_scores_gemma":[0.00017377795,0.00023299475,0.0005634723,0.00021458206,0.00036107938,0.00024687743,0.00023309098,0.0010404176,0.0004889442],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00057494274,0.00023939229,0.0005110948,0.00026790908,0.00003972062,0.00015178409,0.00005142981,0.00029535923,0.986238,0.0004724914,0.0007208747,0.010436993],"study_design_scores_gemma":[0.00023818268,0.0016598369,0.005117272,0.000021554188,0.00010725674,0.0008446584,0.00006273419,0.0030023577,0.9743113,0.00025185282,0.014366555,0.000016373277],"about_ca_topic_score_codex":0.0006121478,"about_ca_topic_score_gemma":0.001076814,"teacher_disagreement_score":0.0012343269,"about_ca_system_score_codex":0.00045463262,"about_ca_system_score_gemma":0.00052104396,"threshold_uncertainty_score":0.004129231},"labels":[],"label_agreement":null},{"id":"W4320718790","doi":"10.21203/rs.3.rs-2557682/v1","title":"Reference-quality bat genomes illuminate adaptations to viral tolerance and disease resistance","year":2023,"lang":"en","type":"preprint","venue":"Research Square","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Waterloo; University of British Columbia; Royal Ontario Museum; University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Robert Koch Institut; Institut Universitaire de France; Hessisches Ministerium für Wissenschaft und Kunst; Irish Research Council; Canadian Institutes of Health Research; Zhejiang University; National Science Foundation; UK Research and Innovation; Science Foundation Ireland; Technische Universität Dresden; Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology; Innovation Saskatchewan; Max-Planck-Gesellschaft; Deutsche Forschungsgemeinschaft","keywords":"Biology; Immune system; ISG15; Genome; Gene; Disease; Inflammation; Plant disease resistance; Immunology; Genetics; Virology","score_opus":0.13587865633490503,"score_gpt":0.4177839514782465,"score_spread":0.28190529514334145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4320718790","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9525004,0.005870129,0.021809313,0.00091203087,0.00044407567,0.000020386786,0.008707953,0.0007547385,0.008980855],"genre_scores_gemma":[0.9684543,0.00113522,0.013268214,0.0007780126,0.0001252293,0.000026284182,0.012242402,0.00065257825,0.0033177242],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992107,0.00014555811,0.000035172965,0.00030957715,0.0001957774,0.00010317304],"domain_scores_gemma":[0.9987419,0.000359992,0.00025547968,0.0003052957,0.0002514685,0.000085853484],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010355001,0.00040756125,0.0006360387,0.0005333175,0.00045284952,0.0018263159,0.00040376492,0.001250035,0.0055132206],"category_scores_gemma":[0.0027601097,0.00047924582,0.00041171245,0.0010612018,0.00046108145,0.0010308552,0.000687134,0.0015534459,0.0016516037],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010789909,0.00005827709,0.033751525,0.00034938625,0.00024636515,0.000112998205,0.00041974557,0.0022000563,0.9273757,0.0046732654,0.0026183873,0.027115308],"study_design_scores_gemma":[0.00018144377,0.0010062441,0.5458681,0.00033480427,0.0007654897,0.0018594287,0.0012949548,0.021348417,0.32959685,0.021814838,0.07576677,0.00016265057],"about_ca_topic_score_codex":0.00099532,"about_ca_topic_score_gemma":0.0023955954,"teacher_disagreement_score":0.0055132206,"about_ca_system_score_codex":0.00058518705,"about_ca_system_score_gemma":0.00025483896,"threshold_uncertainty_score":0.018443584},"labels":[],"label_agreement":null},{"id":"W4321436306","doi":"10.1371/journal.ppat.1011186","title":"Suppression of cGAS- and RIG-I-mediated innate immune signaling by Epstein-Barr virus deubiquitinase BPLF1","year":2023,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Health and Medical Research Fund; University of Toronto; Broad Institute","keywords":"IRF3; Sting; TANK-binding kinase 1; Innate immune system; Deubiquitinating enzyme; RIG-I; Stimulator of interferon genes; Ubiquitin; Interferon; Cell biology; Virus; Biology; Interferon type I; Virology; Immune system; Kinase; Immunology; Gene; Protein kinase A; Biochemistry","score_opus":0.014429008030569752,"score_gpt":0.23547441990964868,"score_spread":0.22104541187907892,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4321436306","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99406934,0.0023573537,0.0024905242,0.00005567572,0.000017002982,0.0000113852,0.0001391818,0.00003681358,0.00082284],"genre_scores_gemma":[0.9975237,0.00062380725,0.0009151612,0.000014043658,0.000004062929,0.000009133259,0.00017536526,0.000004064463,0.0007305935],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999064,0.00001699295,0.000012026328,0.000018262024,0.00002190367,0.00002431448],"domain_scores_gemma":[0.9999405,0.000009285517,0.000019783236,0.000011218826,0.000008481168,0.000010766531],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013610731,0.00029248503,0.00016941607,0.00009613816,0.00011596787,0.00018600305,0.00012314151,0.00018819213,0.000612254],"category_scores_gemma":[0.000088397705,0.00006183112,0.00022561352,0.00007331026,0.00014014884,0.00021188415,0.0001772545,0.00033789486,0.00016186282],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003580344,0.000010187498,0.00017972678,0.000029136432,0.000002757594,0.000026910455,0.000007854456,0.000029905967,0.99862516,0.00006214355,0.000010236329,0.000980188],"study_design_scores_gemma":[0.000003478748,0.00008914352,0.0012807655,0.0000022992572,0.000004808544,0.0001768349,0.000009014267,0.00029442608,0.9969578,0.000023627641,0.0011557506,0.000002153691],"about_ca_topic_score_codex":0.00017260926,"about_ca_topic_score_gemma":0.00027997143,"teacher_disagreement_score":0.000612254,"about_ca_system_score_codex":0.00017918901,"about_ca_system_score_gemma":0.000100978934,"threshold_uncertainty_score":0.0020481944},"labels":[],"label_agreement":null},{"id":"W4322628560","doi":"10.3390/v15030646","title":"Manganese Mediates Its Antiviral Functions in a cGAS-STING Pathway Independent Manner","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; University of Saskatchewan","funders":"Higher Education Discipline Innovation Project; Priority Academic Program Development of Jiangsu Higher Education Institutions; National Natural Science Foundation of China","keywords":"Sting; Innate immune system; Biology; DNA virus; Virus; CRISPR; RNA interference; Virology; Immune system; RNA; Cell biology; Gene; Immunology; Genetics; Genome","score_opus":0.03465677997837074,"score_gpt":0.27482105052729267,"score_spread":0.24016427054892192,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4322628560","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9741097,0.005328347,0.0118957395,0.00039712884,0.00016812718,0.00006616283,0.00048568595,0.00027145934,0.0072777104],"genre_scores_gemma":[0.9926363,0.0010646358,0.0019366249,0.00005995518,0.0000136012995,0.000023763541,0.00021447403,0.000011232192,0.004039365],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998746,0.000024150853,0.000007955483,0.000032341122,0.000030410167,0.000030509775],"domain_scores_gemma":[0.9999505,0.000005509276,0.000015279145,0.0000072760245,0.000009504624,0.000011844093],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013233857,0.0004043587,0.00022714664,0.0001366514,0.00014902864,0.00034276547,0.00021048068,0.00025515503,0.0011017249],"category_scores_gemma":[0.000078066056,0.00008012245,0.00027511304,0.00007407228,0.00022990728,0.0002271891,0.00027491665,0.00036461613,0.0002224081],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011227383,0.00001407411,0.00017405837,0.000062441904,0.0000073656784,0.000044113014,0.000008899901,0.000036900852,0.9981635,0.00018775756,0.000058672445,0.0011298652],"study_design_scores_gemma":[0.000024242843,0.0002204926,0.003113922,0.000012294126,0.00002275726,0.0002100689,0.00003575975,0.0010740045,0.98912466,0.00014914623,0.006006963,0.000005692468],"about_ca_topic_score_codex":0.0007287244,"about_ca_topic_score_gemma":0.0014561636,"teacher_disagreement_score":0.0011017249,"about_ca_system_score_codex":0.00036219967,"about_ca_system_score_gemma":0.0002653292,"threshold_uncertainty_score":0.0036856532},"labels":[],"label_agreement":null},{"id":"W4322757426","doi":"10.1093/jleuko/qiac019","title":"Inducible generalized activation of hSTING-N154S expression in mice leads to lethal hypercytokinemia: a model for “cytokine storm”","year":2023,"lang":"en","type":"article","venue":"Journal of Leukocyte Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; Alberta Bone and Joint Health Institute; University of Calgary","funders":"Canadian Institutes of Health Research; Alberta Children's Hospital Research Institute","keywords":"Biology; Cytokine; Cell biology; Cytokine storm; Expression (computer science); Immunology; Internal medicine; Coronavirus disease 2019 (COVID-19); Medicine; Computer science","score_opus":0.05191397462608306,"score_gpt":0.32123750669735607,"score_spread":0.269323532071273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4322757426","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97349656,0.001280851,0.017838446,0.0005549013,0.00024274648,0.00049051014,0.0019410803,0.00055511785,0.0035997804],"genre_scores_gemma":[0.96645564,0.0016185847,0.016709486,0.00040023334,0.0000709262,0.00073718996,0.0017577782,0.00016731244,0.012082647],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99941146,0.00011088119,0.00008542175,0.00014797736,0.00012891142,0.00011539632],"domain_scores_gemma":[0.9995771,0.000052503783,0.00016577668,0.000058746853,0.000018954737,0.00012697284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004982796,0.0010182526,0.0004368063,0.0010305194,0.00036169658,0.00048953877,0.00064511347,0.001159417,0.0024277337],"category_scores_gemma":[0.00016699222,0.0004421544,0.0005534677,0.00036591326,0.00095704175,0.00043568457,0.00039409538,0.002111821,0.00068922027],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028946184,0.0001634064,0.00015475477,0.00004196363,0.0000078889525,0.00016548937,0.00004109951,0.00012000897,0.9973443,0.0006739904,0.000094227835,0.0009033841],"study_design_scores_gemma":[0.0001953484,0.002376772,0.0021079418,0.00003971231,0.000042303134,0.0011218472,0.000079560436,0.0019320616,0.9846447,0.0003988982,0.007041825,0.000019043184],"about_ca_topic_score_codex":0.00040560143,"about_ca_topic_score_gemma":0.00079920964,"teacher_disagreement_score":0.0024277337,"about_ca_system_score_codex":0.00052674033,"about_ca_system_score_gemma":0.00041254616,"threshold_uncertainty_score":0.00812155},"labels":[],"label_agreement":null},{"id":"W4323294824","doi":"10.15252/embj.2022112387","title":"STING directly recruits WIPI2 for autophagosome formation during STING‐induced autophagy","year":2023,"lang":"en","type":"article","venue":"The EMBO Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Genetics","funders":"Fundamental Research Funds for the Central Universities; Chinese Academy of Sciences; Nankai University; Zhejiang University; National Key Research and Development Program of China; Institute of Zoology, Chinese Academy of Sciences; National Natural Science Foundation of China","keywords":"Sting; Autophagy; Biology; Autophagosome; Cell biology; BECN1; ULK1; Immunology; Genetics; Apoptosis; Phosphorylation","score_opus":0.051106024861326524,"score_gpt":0.2996273085041797,"score_spread":0.24852128364285314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4323294824","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99030167,0.003035232,0.0034325756,0.00009038855,0.000050019946,0.000024611278,0.00050705246,0.00009310991,0.0024651764],"genre_scores_gemma":[0.9957171,0.0005085612,0.0015967116,0.000042451964,0.000009780325,0.000029443836,0.00063846906,0.0000129352575,0.0014446089],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983037,0.000028785827,0.000017423059,0.00002980349,0.000036046822,0.00005759326],"domain_scores_gemma":[0.9999335,0.000008012326,0.000016592508,0.000007826923,0.000008048428,0.000026027888],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015610139,0.0003120346,0.00029250927,0.00017380413,0.00023629078,0.00034375998,0.00014794267,0.0002582188,0.0018846132],"category_scores_gemma":[0.00012334588,0.00017174061,0.00034514244,0.0001296186,0.00018421089,0.00029838402,0.00033901128,0.000492733,0.0007005459],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014386828,0.000011210625,0.00032714353,0.00005185362,0.0000050776316,0.00010881695,0.000011395683,0.000038242484,0.9984817,0.000109123626,0.00008996164,0.0006215575],"study_design_scores_gemma":[0.000014996373,0.00004241856,0.010047428,0.000009392907,0.000009806146,0.00033153445,0.000025399479,0.0018232014,0.98544717,0.00005962492,0.002183629,0.0000053998015],"about_ca_topic_score_codex":0.00031220954,"about_ca_topic_score_gemma":0.0005284751,"teacher_disagreement_score":0.0018846132,"about_ca_system_score_codex":0.00048102552,"about_ca_system_score_gemma":0.00022847399,"threshold_uncertainty_score":0.0063046217},"labels":[],"label_agreement":null},{"id":"W4361232753","doi":"10.5281/zenodo.7784982","title":"ATR: SCAF1 immunoprecipitation","year":2023,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Immunoprecipitation; Chemistry; Computer science; Biochemistry; Gene","score_opus":0.032387028697769486,"score_gpt":0.25553041741269683,"score_spread":0.22314338871492734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4361232753","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0051035485,0.001220067,0.15156661,0.000565846,0.000942676,0.0023113557,0.7530561,0.07598826,0.009245634],"genre_scores_gemma":[0.014579761,0.0013925192,0.23499846,0.0012984956,0.00022881587,0.0141100325,0.64924294,0.055304486,0.028844506],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966472,0.00070451695,0.00065330794,0.0009180697,0.00064844766,0.00042845163],"domain_scores_gemma":[0.9966354,0.0013414077,0.0003351946,0.00083736144,0.00048697746,0.00036378577],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.004764423,0.004996502,0.0054918365,0.005424394,0.003018809,0.0037005153,0.0050224937,0.0020425227,0.34865284],"category_scores_gemma":[0.005941897,0.003364815,0.002790031,0.00382158,0.0013251449,0.0020617926,0.0020309137,0.0068409294,0.20861621],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0037156534,0.000656323,0.002204104,0.0063776984,0.0005482225,0.0007691678,0.00058198196,0.0026456804,0.13488914,0.0069108247,0.7973037,0.04339765],"study_design_scores_gemma":[0.0020597912,0.00076747884,0.0076700216,0.0013688478,0.0005978029,0.002200478,0.00038541976,0.0127522,0.16019411,0.012323433,0.79903924,0.0006412324],"about_ca_topic_score_codex":0.0033572994,"about_ca_topic_score_gemma":0.0057245414,"teacher_disagreement_score":0.34865284,"about_ca_system_score_codex":0.001961781,"about_ca_system_score_gemma":0.0033828204,"threshold_uncertainty_score":0.9290677},"labels":[],"label_agreement":null},{"id":"W4362549334","doi":"10.1136/jitc-2022-006170","title":"Cancer cell genotype associated tumor immune microenvironment exhibits differential response to therapeutic STING pathway activation in high-grade serous ovarian cancer","year":2023,"lang":"en","type":"article","venue":"Journal for ImmunoTherapy of Cancer","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Ottawa; Queen's University","funders":"Canadian Institutes of Health Research; Queen's University; Institute of Cancer Research; Canada Foundation for Innovation","keywords":"PTEN; Cancer research; Tumor microenvironment; Ovarian cancer; Medicine; Immune system; Biology; Cancer; Immunology; Internal medicine; PI3K/AKT/mTOR pathway; Apoptosis","score_opus":0.01799954787856017,"score_gpt":0.28620840698745886,"score_spread":0.2682088591088987,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362549334","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9997111,0.00008564389,0.00005926238,0.0000031177492,8.722718e-7,0.0000030605331,0.000034373228,0.0000027404762,0.000099848075],"genre_scores_gemma":[0.9996939,0.000054661275,0.0000684976,0.000004779124,0.0000010647235,0.000004776572,0.000084021674,8.598146e-7,0.00008745542],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999424,0.000009955979,0.0000049095443,0.000011730473,0.000013751782,0.00001731383],"domain_scores_gemma":[0.99992704,0.0000106032085,0.00002264876,0.000006541967,0.0000067797655,0.000026419475],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006996131,0.00007459925,0.00012215036,0.00023927813,0.000083234256,0.00017857004,0.000042294057,0.00009777608,0.00086116645],"category_scores_gemma":[0.00011757438,0.00005872596,0.00008055861,0.0001483645,0.000105479645,0.00007117195,0.00009598765,0.00013858022,0.00008792691],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013947502,0.000090049776,0.08854104,0.000045081237,0.000021725209,0.00031902682,0.000096228076,0.00018139399,0.90474516,0.00006641285,0.00007071243,0.0044284402],"study_design_scores_gemma":[0.00003987713,0.0016830877,0.8035516,0.0000062553286,0.000061587874,0.002723376,0.000317486,0.0013222235,0.18862624,0.000082905026,0.0015784375,0.0000068609024],"about_ca_topic_score_codex":0.00024264868,"about_ca_topic_score_gemma":0.0005218954,"teacher_disagreement_score":0.00086116645,"about_ca_system_score_codex":0.000115012306,"about_ca_system_score_gemma":0.00008269131,"threshold_uncertainty_score":0.0028808713},"labels":[],"label_agreement":null},{"id":"W4362593672","doi":"10.1158/1538-7445.am2023-6417","title":"Abstract 6417: Deciphering aberrant STING pathway and exploring oncolytic viruses therapy in low grade serous ovarian carcinoma","year":2023,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Ottawa","funders":"","keywords":"Oncolytic virus; Biology; Sting; Cancer research; Vesicular stomatitis virus; Interferon; Virus; Virology","score_opus":0.25151686111610927,"score_gpt":0.39587454010810236,"score_spread":0.1443576789919931,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362593672","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9910445,0.006067407,0.0016510367,0.00011766125,0.000025392868,0.000048140988,0.00025483978,0.000041207888,0.0007498406],"genre_scores_gemma":[0.99189126,0.0036971453,0.0025515119,0.000078600446,0.000015938418,0.000046130037,0.00060203107,0.000009028674,0.0011082971],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999529,0.0000064336014,0.0000049233618,0.000008340703,0.0000142531235,0.000013149665],"domain_scores_gemma":[0.9999676,0.0000051260686,0.000009174593,0.0000035757482,0.000006326374,0.000008260217],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012711767,0.00021271325,0.00024263388,0.00030671177,0.00010697709,0.00028642203,0.00011242283,0.00022765291,0.00092648144],"category_scores_gemma":[0.000084756626,0.00009834639,0.00019399477,0.00024164094,0.00015721364,0.0002409951,0.00013603673,0.00031476968,0.00021452007],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033746104,0.00005989629,0.005776734,0.00022604018,0.00001325462,0.00015318379,0.000030041723,0.00015369435,0.9805784,0.0000998529,0.00013855167,0.012432852],"study_design_scores_gemma":[0.00006969673,0.0018162121,0.04856048,0.000042795087,0.00011060659,0.0018176824,0.00016253078,0.003623634,0.9333021,0.00020330942,0.010281072,0.000009981495],"about_ca_topic_score_codex":0.00039473962,"about_ca_topic_score_gemma":0.00044675847,"teacher_disagreement_score":0.00092648144,"about_ca_system_score_codex":0.00025091082,"about_ca_system_score_gemma":0.00021883885,"threshold_uncertainty_score":0.0030994415},"labels":[],"label_agreement":null},{"id":"W4362595767","doi":"10.1158/1538-7445.am2023-4833","title":"Abstract 4833: Inhibiting the mitochondrial RNA degradosome complex SUV3 and PNPase increases dsRNA in the cytoplasm, triggers a viral mimicry response and kills AML cells and progenitors","year":2023,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; Princess Margaret Cancer Centre","funders":"","keywords":"Biology; Gene knockdown; Small hairpin RNA; RNA interference; Myeloid leukemia; Molecular biology; Cell biology; Cancer research; RNA; Gene; Genetics","score_opus":0.05977300108846799,"score_gpt":0.3537148730375583,"score_spread":0.29394187194909027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362595767","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97262615,0.001713303,0.0041373046,0.00034364598,0.00015231292,0.00010691715,0.015181891,0.0011689028,0.0045696055],"genre_scores_gemma":[0.9698341,0.0007764885,0.0038612369,0.00017882635,0.000014209763,0.00012933924,0.016872186,0.00013472658,0.008198983],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997695,0.000016360804,0.000024583253,0.000047759204,0.00009663813,0.000045128287],"domain_scores_gemma":[0.9998964,0.000020801213,0.000025258054,0.000011260713,0.000012065416,0.00003416121],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013179128,0.00036706115,0.0004139008,0.00028941076,0.00016453258,0.00039135566,0.00020056251,0.00025515867,0.005166317],"category_scores_gemma":[0.00014546477,0.00012498544,0.00033617328,0.00025251467,0.00013791306,0.00013109778,0.00018975323,0.0007073436,0.0011161136],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026854654,0.00005496034,0.00036107228,0.000061028823,0.000013564023,0.000033569104,0.000007683922,0.00017406879,0.99554515,0.00008719627,0.00063437526,0.0027587027],"study_design_scores_gemma":[0.00003369011,0.00031953256,0.004946735,0.0000062930094,0.000025064504,0.00013451173,0.000018633998,0.001449315,0.98834527,0.000043775977,0.0046731243,0.00000398387],"about_ca_topic_score_codex":0.0012363425,"about_ca_topic_score_gemma":0.0017457511,"teacher_disagreement_score":0.005166317,"about_ca_system_score_codex":0.000298117,"about_ca_system_score_gemma":0.0003192264,"threshold_uncertainty_score":0.017283082},"labels":[],"label_agreement":null},{"id":"W4364352156","doi":"10.1172/jci.insight.166012","title":"Cytokine storm–based mechanisms for extrapulmonary manifestations of SARS-CoV-2 infection","year":2023,"lang":"en","type":"article","venue":"JCI Insight","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Rush University; National Institutes of Health; University of Alabama at Birmingham; University of Alabama; American Heart Association","keywords":"Albuminuria; Cytokine; Cytokine storm; Medicine; In vivo; Lipopolysaccharide; Biology; Coronavirus disease 2019 (COVID-19); Immunology; Kidney; Internal medicine; Disease; Infectious disease (medical specialty)","score_opus":0.05082217283088905,"score_gpt":0.30736294611435444,"score_spread":0.25654077328346536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4364352156","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9910383,0.0020465462,0.0041431575,0.00014042974,0.000055706463,0.00014878153,0.00042436735,0.00019677462,0.001805758],"genre_scores_gemma":[0.9951965,0.0011809252,0.0016984262,0.00010671665,0.000036887464,0.00010119535,0.00040400718,0.0000144306605,0.00126085],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9997645,0.000053219967,0.000021600768,0.000049465965,0.0000536092,0.000057639743],"domain_scores_gemma":[0.9998865,0.000007011485,0.00004768583,0.000015428275,0.000007889271,0.000035484172],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019493856,0.0006576427,0.00026504803,0.00031691816,0.00017532965,0.00027733707,0.00017690346,0.00034012555,0.0012742195],"category_scores_gemma":[0.0000891825,0.0001498827,0.00044092347,0.00010029882,0.0003177971,0.00028149466,0.0004115545,0.0007755602,0.00022218341],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023300273,0.000044122993,0.00096977135,0.000055549488,0.0000073741066,0.00022469283,0.000016150705,0.00006894672,0.997139,0.0001791158,0.000046830253,0.0010155133],"study_design_scores_gemma":[0.00019457524,0.0024944698,0.064924374,0.000045402157,0.00007821579,0.004206081,0.00012600458,0.0021773227,0.92093354,0.0003969138,0.004403687,0.000019423549],"about_ca_topic_score_codex":0.00012996401,"about_ca_topic_score_gemma":0.00025343386,"teacher_disagreement_score":0.0012742195,"about_ca_system_score_codex":0.00019117794,"about_ca_system_score_gemma":0.00012559257,"threshold_uncertainty_score":0.0042627454},"labels":[],"label_agreement":null},{"id":"W4365512356","doi":"10.1158/1538-7445.am2023-ct124","title":"Abstract CT124: A first-in-clinic phase 1 study of GSK3745417 STING agonist in relapsed/refractory acute myeloid leukemia and high-risk myelodysplastic syndrome","year":2023,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"","keywords":"Medicine; Myeloid leukemia; Sting; Tolerability; Myelodysplastic syndromes; Leukemia; Stimulator of interferon genes; Internal medicine; Bone marrow; Cancer research; Immunology; Oncology; Pharmacology; Immune system; Adverse effect; Innate immune system","score_opus":0.05234164559355544,"score_gpt":0.3799489385241098,"score_spread":0.3276072929305544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4365512356","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9669716,0.011805411,0.0013866961,0.0018967041,0.0005088183,0.005195969,0.005247079,0.00055354834,0.0064340876],"genre_scores_gemma":[0.96719164,0.0072852448,0.0024482876,0.002678703,0.00023527094,0.0040642596,0.0073264223,0.00008794518,0.008682107],"study_design_codex":"design_other","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.9997867,0.00006883992,0.000014859522,0.000045303663,0.00003013273,0.00005409515],"domain_scores_gemma":[0.9996542,0.000034614324,0.00004925589,0.00002821106,0.00003574752,0.00019800664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00087531586,0.0013383535,0.0018605943,0.00041995224,0.00040910346,0.0010837303,0.0009480069,0.0012976243,0.008080247],"category_scores_gemma":[0.000593567,0.00047984376,0.0012878451,0.00039384564,0.0006230429,0.00065145694,0.00033179478,0.0036485305,0.0018887097],"study_design_candidate":"nonrandomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.27909902,0.091999635,0.0083176,0.006155115,0.0045035603,0.0015946246,0.0007008935,0.00713162,0.24488108,0.0015500662,0.04856978,0.305497],"study_design_scores_gemma":[0.41319817,0.5312785,0.01558034,0.0002663491,0.0013671789,0.0016352381,0.0001474607,0.0028699392,0.013603029,0.0006187096,0.01934497,0.00009013077],"about_ca_topic_score_codex":0.0010679135,"about_ca_topic_score_gemma":0.003218316,"teacher_disagreement_score":0.008080247,"about_ca_system_score_codex":0.00084960373,"about_ca_system_score_gemma":0.0013314474,"threshold_uncertainty_score":0.027031124},"labels":[],"label_agreement":null},{"id":"W4367053414","doi":"10.1101/2023.04.25.537919","title":"A Nanoparticle RIG-I Agonist for Cancer Immunotherapy","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Vanderbilt Digestive Diseases Research Center, Vanderbilt University Medical Center; Canadian Institutes of Health Research; Vanderbilt Institute of Nanoscale Science and Engineering, Vanderbilt University; Congressionally Directed Medical Research Programs; Vanderbilt University Medical Center; National Science Foundation; Vanderbilt-Ingram Cancer Center; Vanderbilt University","keywords":"Cancer research; Cancer immunotherapy; Tumor microenvironment; Chemistry; Immunotherapy; In vivo; Immunogenicity; Immune system; Pharmacology; Breast cancer; Cancer; Medicine; Internal medicine; Immunology; Biology","score_opus":0.02437281140301148,"score_gpt":0.2628870925377491,"score_spread":0.23851428113473763,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4367053414","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90189147,0.021567842,0.052659903,0.0015571006,0.0005480406,0.0003820684,0.00083529484,0.0007817014,0.01977659],"genre_scores_gemma":[0.97419286,0.002799274,0.013061307,0.0003756279,0.000040082832,0.00014717995,0.00037976983,0.00003166528,0.0089722015],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991393,0.000016679889,0.0000057785933,0.00001995558,0.000027387578,0.000016291697],"domain_scores_gemma":[0.999966,0.000005452679,0.000009675594,0.000003910002,0.0000073403,0.000007515681],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013327124,0.00034220616,0.00015687493,0.00015182399,0.00010597497,0.00025260015,0.0001636467,0.00045691722,0.0014055321],"category_scores_gemma":[0.000072466806,0.000103443745,0.0002618618,0.00007602313,0.0001350319,0.00018163152,0.00021332705,0.00047342447,0.00064661575],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004690626,0.000022670341,0.000027696848,0.00005312323,0.0000037600898,0.000025041902,0.0000065921877,0.00018279835,0.9966518,0.00016579991,0.00015848449,0.0026551422],"study_design_scores_gemma":[0.000022924769,0.00052824966,0.00019690214,0.000010838347,0.000014392615,0.00020850173,0.000009256475,0.0018602796,0.9887455,0.00010317598,0.00829403,0.000006011745],"about_ca_topic_score_codex":0.00022190607,"about_ca_topic_score_gemma":0.00026056328,"teacher_disagreement_score":0.0014055321,"about_ca_system_score_codex":0.0003069894,"about_ca_system_score_gemma":0.00016327373,"threshold_uncertainty_score":0.004701972},"labels":[],"label_agreement":null},{"id":"W4367669345","doi":"10.1093/hmg/ddad062","title":"Activation of the cGAS-STING innate immune response in cells with deficient mitochondrial topoisomerase TOP1MT","year":2023,"lang":"en","type":"article","venue":"Human Molecular Genetics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia; Alberta Children's Hospital; University of Calgary","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of General Medical Sciences; National Heart, Lung, and Blood Institute; Alberta Children's Hospital Research Institute; Alberta Children's Hospital Foundation; Natural Sciences and Engineering Research Council of Canada; Lupus Canada; National Cancer Institute; National Institutes of Health; Children's Hospital Foundation; American College Health Foundation; BC Children's Hospital; Center for Cancer Research","keywords":"Biology; Innate immune system; Mitochondrial DNA; Stimulator of interferon genes; Sting; Cell biology; Interferon; Mitochondrion; Immune system; Immunology; Genetics; Gene","score_opus":0.01207276859676911,"score_gpt":0.24395901640451792,"score_spread":0.2318862478077488,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4367669345","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956049,0.0003485666,0.0026259362,0.00009166536,0.000033849683,0.00002753094,0.00074797106,0.00006849461,0.00045118667],"genre_scores_gemma":[0.9968899,0.00018526865,0.0011636674,0.000031763633,0.000007672862,0.000024028386,0.0007047093,0.000019422849,0.00097353075],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998074,0.000032919746,0.00003286974,0.000043830856,0.00004982014,0.000033106317],"domain_scores_gemma":[0.99982506,0.000036395028,0.000060914343,0.000030195335,0.000010415711,0.000037138416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013585214,0.00041410764,0.00035689154,0.00016163793,0.00017215493,0.00033380886,0.00021894423,0.00036978876,0.0010971224],"category_scores_gemma":[0.00015807993,0.000121427554,0.0003239157,0.00019968762,0.00030315283,0.00016883457,0.00021559247,0.00077422225,0.0004509993],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059317692,0.000014289893,0.00013249213,0.000012509033,0.0000039980437,0.00008628797,0.00000999538,0.000029028122,0.9993005,0.000039392195,0.000015324065,0.00029674635],"study_design_scores_gemma":[0.000016891383,0.00025712122,0.0029801421,0.0000034504244,0.00001295473,0.00066302915,0.000033171727,0.0011508081,0.9935301,0.000039465613,0.0013077452,0.0000050540225],"about_ca_topic_score_codex":0.000715824,"about_ca_topic_score_gemma":0.00065216544,"teacher_disagreement_score":0.0010971224,"about_ca_system_score_codex":0.00035822962,"about_ca_system_score_gemma":0.00019487018,"threshold_uncertainty_score":0.0036702156},"labels":[],"label_agreement":null},{"id":"W4367673919","doi":"10.1016/j.vetmic.2023.109769","title":"Transforming acidic coiled-coil containing protein 3 suppresses influenza A virus replication by impeding viral endosomal trafficking and nuclear import","year":2023,"lang":"en","type":"article","venue":"Veterinary Microbiology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Biology; Endosome; Cell biology; Downregulation and upregulation; Viral replication; Nuclear export signal; Influenza A virus; Nuclear transport; Viral protein; Virology; Virus; Cell nucleus; Gene; Genetics; Cytoplasm","score_opus":0.023480548639742808,"score_gpt":0.2745181094233947,"score_spread":0.2510375607836519,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4367673919","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974063,0.000318215,0.0010483239,0.00010682883,0.000049120903,0.000015606001,0.00010927256,0.00007612312,0.000870214],"genre_scores_gemma":[0.9976094,0.00010705765,0.00068494515,0.00004435764,0.000012292195,0.000014644988,0.00020462858,0.000016920703,0.0013057942],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99971455,0.00005919362,0.000024723837,0.000030865594,0.00007076634,0.00009985166],"domain_scores_gemma":[0.99970716,0.000092273855,0.0000646958,0.00003198865,0.000019108695,0.000084730906],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002381824,0.0003053705,0.0002749793,0.000336192,0.00025896137,0.0004895297,0.00024241653,0.00038667338,0.0013188331],"category_scores_gemma":[0.00020426216,0.00016058011,0.00033204476,0.0001895563,0.00055992836,0.00014780322,0.00020083846,0.0009144773,0.00028445365],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000317975,0.000063020896,0.0001212232,0.000010124217,0.000003403964,0.000032151784,0.000009342499,0.00006596879,0.9989121,0.000110845125,0.000026507785,0.0003273323],"study_design_scores_gemma":[0.0000511015,0.00049342314,0.0020096065,0.000002353843,0.000011613501,0.00014409285,0.000044083346,0.0019700143,0.9940706,0.000084251405,0.0011136119,0.0000051983925],"about_ca_topic_score_codex":0.0006548848,"about_ca_topic_score_gemma":0.0009512641,"teacher_disagreement_score":0.0013188331,"about_ca_system_score_codex":0.00039468997,"about_ca_system_score_gemma":0.00040165943,"threshold_uncertainty_score":0.0044119954},"labels":[],"label_agreement":null},{"id":"W4376134070","doi":"10.1186/s13578-023-01024-4","title":"ISG15 suppresses ovulation and female fertility by ISGylating ADAMTS1","year":2023,"lang":"en","type":"article","venue":"Cell & Bioscience","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Science and Technology Service Network Plan; Jiangsu Provincial Key Research and Development Program; Key Technologies Research and Development Program of Anhui Province","keywords":"Fertility; Ovulation; ISG15; Gynecology; Biology; Andrology; Demography; Medicine; Pregnancy; Population; Sociology; Genetics","score_opus":0.015078742574074856,"score_gpt":0.25097753743433493,"score_spread":0.23589879486026008,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4376134070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99388134,0.0015074266,0.00209517,0.00021277239,0.00007587747,0.00002572071,0.00024144001,0.00010241451,0.0018578923],"genre_scores_gemma":[0.9964142,0.000393152,0.00088930654,0.0000659765,0.000010287815,0.000016199258,0.00019500282,0.0000135071605,0.0020022788],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998099,0.000037264155,0.000020398986,0.00003420347,0.000047830097,0.00005041181],"domain_scores_gemma":[0.9998665,0.000009223678,0.000053615127,0.000018459612,0.000008575631,0.000043592863],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017436569,0.00031515583,0.0002145972,0.0003130065,0.00013840657,0.00024657795,0.00023809931,0.00026733955,0.0019803047],"category_scores_gemma":[0.00010039364,0.000111933674,0.00031783586,0.00016087099,0.00041784902,0.00014636246,0.00020709728,0.00047454864,0.0002500642],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002546385,0.000043549346,0.00089327723,0.000046254434,0.000016191712,0.0000753135,0.000013156138,0.000085031446,0.9960944,0.00025738688,0.00009956658,0.0021213167],"study_design_scores_gemma":[0.000029348841,0.00044918674,0.008026494,0.000008111698,0.0000280008,0.00022521162,0.000030870135,0.00061973586,0.98706764,0.00010024489,0.0034116856,0.000003504845],"about_ca_topic_score_codex":0.00032757304,"about_ca_topic_score_gemma":0.0005585268,"teacher_disagreement_score":0.0019803047,"about_ca_system_score_codex":0.0003078129,"about_ca_system_score_gemma":0.00021715586,"threshold_uncertainty_score":0.0066247582},"labels":[],"label_agreement":null},{"id":"W4376610218","doi":"10.7554/elife.88329.sa2","title":"Author response: The carboxyl-terminal sequence of PUMA binds to both anti-apoptotic proteins and membranes","year":2023,"lang":"en","type":"peer-review","venue":"","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Puma; Terminal (telecommunication); Sequence (biology); Membrane; Apoptosis; Cell biology; Chemistry; Biochemistry; Biology; Computer science; Computer network","score_opus":0.058420306652644964,"score_gpt":0.34504784790209597,"score_spread":0.286627541249451,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4376610218","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02563882,0.015157406,0.006698474,0.32366785,0.3453903,0.000601359,0.003633143,0.0023371165,0.27687553],"genre_scores_gemma":[0.040391214,0.0062273117,0.0022122914,0.014556204,0.031146545,0.000096515534,0.0017909226,0.0004271043,0.90315187],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980465,0.0003419422,0.0000953996,0.00020447298,0.0011433881,0.00016832343],"domain_scores_gemma":[0.98526114,0.0026698257,0.0007775425,0.00078745704,0.008855704,0.0016483706],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018489336,0.00059170695,0.00058820355,0.001204275,0.001090885,0.003022676,0.00058006926,0.0025946295,0.21168149],"category_scores_gemma":[0.019944487,0.0002513684,0.00025702728,0.0005808173,0.0008154506,0.0011902398,0.0014517047,0.0015666619,0.0929462],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022576803,0.00004019708,0.0008265067,0.0006459212,0.000024063234,0.00041898584,0.00017316344,0.000117468095,0.007665528,0.0025489952,0.9030986,0.08421499],"study_design_scores_gemma":[0.000023530569,0.000047628844,0.0015433911,0.0000726831,0.0000092911305,0.00038346808,0.00022405293,0.00012402418,0.0035198964,0.001293858,0.99274445,0.000013689976],"about_ca_topic_score_codex":0.00070120447,"about_ca_topic_score_gemma":0.0016321151,"teacher_disagreement_score":0.21168149,"about_ca_system_score_codex":0.00075968355,"about_ca_system_score_gemma":0.0018396789,"threshold_uncertainty_score":0.70814514},"labels":[],"label_agreement":null},{"id":"W4376617879","doi":"10.1038/s41594-023-00988-8","title":"MAVS deSUMOylation by SENP1 inhibits its aggregation and antagonizes IRF3 activation","year":2023,"lang":"en","type":"article","venue":"Nature Structural & Molecular Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"IRF3; SUMO protein; Signal transducing adaptor protein; Cell biology; Ubiquitin; Phosphorylation; Biology; Chemistry; Biochemistry; Receptor; Innate immune system; Gene","score_opus":0.004655067481006575,"score_gpt":0.28305427489554447,"score_spread":0.2783992074145379,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4376617879","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99125904,0.0019039903,0.0030900715,0.00039309874,0.00011315156,0.000033097986,0.0006358769,0.00019513934,0.0023765133],"genre_scores_gemma":[0.99461925,0.0004677537,0.0012015717,0.00010621939,0.000019552235,0.000035375328,0.0010087566,0.000047775804,0.0024936935],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99973637,0.000046929134,0.000023063769,0.000044819873,0.000049493075,0.00009928354],"domain_scores_gemma":[0.9998455,0.000027288563,0.00003723152,0.00003276683,0.000019920199,0.000037282007],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025542447,0.00045324667,0.00036981943,0.0002070278,0.00041107304,0.0004036439,0.00036453048,0.00039097754,0.0028299706],"category_scores_gemma":[0.00025931172,0.00021140004,0.0005651351,0.00018726545,0.00031971038,0.00030351867,0.00035931708,0.0011541041,0.0011167907],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027363288,0.000031137122,0.0000884221,0.000033700057,0.000013912773,0.00004734411,0.000016407595,0.00006455504,0.9982495,0.00014493584,0.0001788927,0.0008575818],"study_design_scores_gemma":[0.000013627611,0.000050383158,0.0011084514,0.0000022185952,0.0000064492833,0.00011670446,0.000017439957,0.00040214052,0.99601257,0.000034472974,0.002231315,0.000004222007],"about_ca_topic_score_codex":0.001048743,"about_ca_topic_score_gemma":0.001175092,"teacher_disagreement_score":0.0028299706,"about_ca_system_score_codex":0.0005490763,"about_ca_system_score_gemma":0.00032690918,"threshold_uncertainty_score":0.009467185},"labels":[],"label_agreement":null},{"id":"W4376872226","doi":"10.1002/eji.202350384","title":"Ubiquitination network in the type I IFN‐induced antiviral signaling pathway","year":2023,"lang":"en","type":"review","venue":"European Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Priority Academic Program Development of Jiangsu Higher Education Institutions; Government of Jiangsu Province; National Natural Science Foundation of China","keywords":"Biology; Cell biology; Signal transduction; Ubiquitin; STAT protein; Effector; JAK-STAT signaling pathway; Janus kinase; stat; Innate immune system; Transcription factor; Interferon; Receptor; Immunology; STAT3; Gene; Genetics; Tyrosine kinase","score_opus":0.07124502938502732,"score_gpt":0.3117474174360182,"score_spread":0.2405023880509909,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4376872226","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00024030836,0.99751604,0.00021069091,0.00020733842,0.00025188088,0.000004504746,0.000013651006,0.000011236135,0.0015443501],"genre_scores_gemma":[0.0011605711,0.99737513,0.00020708921,0.00014805335,0.00016575988,0.0000052115915,0.000026069045,0.0000014258464,0.00091072475],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999038,0.000013784023,0.000012190418,0.000019099443,0.000036993755,0.000014166266],"domain_scores_gemma":[0.99993014,0.000019618768,0.000013073105,0.0000021744645,0.000022951826,0.000011962875],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002784663,0.000651195,0.00094435987,0.0011941077,0.00027847826,0.0008656704,0.0006459028,0.00083032984,0.0023028937],"category_scores_gemma":[0.00017735812,0.00022217029,0.00027941065,0.0013372316,0.00031552862,0.0012072858,0.00055425643,0.0012104985,0.0016830452],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011920234,0.000057038884,0.00019941079,0.012789949,0.00007041347,0.00038797208,0.000075983524,0.0005313945,0.0073278267,0.008869432,0.024736103,0.9448353],"study_design_scores_gemma":[0.000011863839,0.00009973054,0.0008112611,0.0014199137,0.000073803385,0.0013204964,0.000050939754,0.00015635208,0.0011674197,0.002901865,0.99196714,0.000019241457],"about_ca_topic_score_codex":0.0005319113,"about_ca_topic_score_gemma":0.0008007525,"teacher_disagreement_score":0.0023028937,"about_ca_system_score_codex":0.00069248263,"about_ca_system_score_gemma":0.0008112631,"threshold_uncertainty_score":0.0077039003},"labels":[],"label_agreement":null},{"id":"W4376959222","doi":"10.1038/s41586-023-06034-3","title":"GWAS and meta-analysis identifies 49 genetic variants underlying critical COVID-19","year":2023,"lang":"en","type":"review","venue":"Nature","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":209,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University and Génome Québec Innovation Centre; University of Toronto; Kingston Health Sciences Centre; Queen's University","funders":"Instituto de Salud Carlos III; Biotechnology and Biological Sciences Research Council; Medical Research Council; Northwest Regional Development Agency; Conselho Nacional de Desenvolvimento Científico e Tecnológico; European Regional Development Fund; European Commission; Intensive Care Society; Public Health England; Department of Health and Social Care; National Institute for Health and Care Research; Diabetes UK; UK Research and Innovation; Wellcome Trust; British Heart Foundation; Research Councils UK; LifeArc","keywords":"Coronavirus disease 2019 (COVID-19); Genome-wide association study; 2019-20 coronavirus outbreak; Homogeneous; Phenotype; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Genetic variants; Meta-analysis; Computational biology; Disease; Biology; Genetics; Virology; Medicine; Outbreak; Infectious disease (medical specialty); Single-nucleotide polymorphism; Genotype; Statistical physics; Gene; Internal medicine; Physics","score_opus":0.1884140709289711,"score_gpt":0.44680086481824266,"score_spread":0.25838679388927155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4376959222","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8489095,0.12561367,0.011104101,0.0017687331,0.00061912177,0.00015347607,0.009231171,0.00045408454,0.0021460813],"genre_scores_gemma":[0.99101746,0.0047891038,0.0016872544,0.00018673096,0.0001357603,0.000061289145,0.00185645,0.00006166277,0.00020442346],"study_design_codex":"observational","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9954863,0.0018823884,0.00060590234,0.0011543739,0.00051815016,0.00035283828],"domain_scores_gemma":[0.99344444,0.0041543357,0.00075060193,0.001015069,0.0003521001,0.00028347998],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0049274852,0.0017142938,0.00342639,0.0027991666,0.00084493903,0.0021842052,0.0013456662,0.0015101294,0.0032390652],"category_scores_gemma":[0.008364713,0.00077634735,0.013677437,0.005935769,0.000518237,0.00052824774,0.0012865309,0.0015195047,0.00027583505],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007945841,0.00006934241,0.58934957,0.0030986539,0.37206206,0.0019984855,0.000132962,0.0040340787,0.0044830986,0.00081754784,0.0034104607,0.012597897],"study_design_scores_gemma":[0.0014247715,0.00063637126,0.5099365,0.0006299728,0.46674502,0.0016107189,0.0002579262,0.010276794,0.0016335753,0.002302103,0.0044564866,0.00008966783],"about_ca_topic_score_codex":0.006665748,"about_ca_topic_score_gemma":0.008111773,"teacher_disagreement_score":0.006665748,"about_ca_system_score_codex":0.0005281148,"about_ca_system_score_gemma":0.00069729704,"threshold_uncertainty_score":0.02605933},"labels":[],"label_agreement":null},{"id":"W4377094281","doi":"10.1172/jci149310","title":"Atrx deletion impairs CGAS/STING signaling and increases sarcoma response to radiation and oncolytic herpesvirus","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; University Health Network","funders":"National Institute of General Medical Sciences; National Cancer Institute; National Institutes of Health","keywords":"ATRX; Oncolytic virus; Cancer research; Biology; Telomere; Cancer; Mutation; Gene; Genetics","score_opus":0.05448702553684602,"score_gpt":0.36080234072865763,"score_spread":0.3063153151918116,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377094281","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99814093,0.0003554086,0.00071782083,0.00003090993,0.000008531254,0.000015085718,0.00018566239,0.000041285286,0.0005043733],"genre_scores_gemma":[0.9974105,0.0002514359,0.0008286746,0.000015981972,0.0000029311238,0.00002000372,0.0002888834,0.000009524159,0.0011721725],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981254,0.000039159262,0.000026620031,0.00003595293,0.000042507058,0.00004327485],"domain_scores_gemma":[0.99986935,0.000024493875,0.000046987778,0.00001655645,0.0000058868327,0.00003679004],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001655615,0.00030970183,0.00018733118,0.0003272007,0.000075331925,0.00020862294,0.00015914862,0.00026482297,0.0013508018],"category_scores_gemma":[0.00008692856,0.00014680863,0.00023447137,0.00011873554,0.00023419477,0.0001509282,0.00014318393,0.00051429024,0.00022928428],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011461102,0.00004834579,0.00019282276,0.000010759744,0.0000040526825,0.000025454581,0.000008162429,0.00009136507,0.9989177,0.000046957477,0.000016828879,0.0005230645],"study_design_scores_gemma":[0.000020734096,0.0006783689,0.004693496,0.0000051828765,0.000012267781,0.00024959,0.000020124598,0.0010300605,0.99247205,0.000027449621,0.00078807253,0.0000025957581],"about_ca_topic_score_codex":0.00040082957,"about_ca_topic_score_gemma":0.00052286533,"teacher_disagreement_score":0.0013508018,"about_ca_system_score_codex":0.00021314,"about_ca_system_score_gemma":0.00016183534,"threshold_uncertainty_score":0.0045188665},"labels":[],"label_agreement":null},{"id":"W4379107718","doi":"10.21203/rs.3.rs-2952602/v1","title":"The chicken cGAS-STING pathway exerts interferon independent antiviral function via cell apoptosis","year":2023,"lang":"en","type":"preprint","venue":"Research Square","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Higher Education Discipline Innovation Project; National Natural Science Foundation of China","keywords":"Sting; Interferon; Apoptosis; Function (biology); Chemistry; Cell biology; Virology; Cancer research; Biology; Biochemistry; Physics","score_opus":0.05610516745397135,"score_gpt":0.33471464372105225,"score_spread":0.2786094762670809,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4379107718","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9744707,0.004605501,0.006920982,0.000327153,0.00009380833,0.000029029386,0.000336082,0.0002018986,0.013014742],"genre_scores_gemma":[0.99124616,0.0007795802,0.0019906547,0.000035661753,0.000014221852,0.000010505705,0.00018867766,0.000017720544,0.005716834],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999089,0.000014091005,0.0000048643137,0.000021542433,0.000022092368,0.0000284521],"domain_scores_gemma":[0.9999182,0.000009859241,0.000020259233,0.000015723606,0.000017766733,0.000018113818],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011094912,0.00029565816,0.00017542095,0.00031883435,0.00017576234,0.0004162492,0.00012798244,0.00023491756,0.0014008137],"category_scores_gemma":[0.00010036082,0.000119805176,0.00017376736,0.0001277012,0.0003337067,0.00026326443,0.00017046904,0.0004439195,0.00046195363],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021832672,0.0000064627943,0.00044528474,0.00004552383,0.0000065205118,0.00008252724,0.00001536814,0.000079934616,0.99400216,0.0008811162,0.000110713096,0.0041060303],"study_design_scores_gemma":[0.000025253816,0.00018529597,0.011474284,0.000012658164,0.000019729383,0.00035498806,0.000048091344,0.0014001814,0.9804575,0.00048626759,0.005530927,0.0000048386114],"about_ca_topic_score_codex":0.00084674923,"about_ca_topic_score_gemma":0.0011732711,"teacher_disagreement_score":0.0014008137,"about_ca_system_score_codex":0.0005146605,"about_ca_system_score_gemma":0.00026560153,"threshold_uncertainty_score":0.0046862364},"labels":[],"label_agreement":null},{"id":"W4380675113","doi":"10.1101/2023.06.14.545012","title":"LRRK2 regulates the activation of the unfolded protein response and antigen presentation in macrophages during inflammation","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer; McGill University; McGill University Health Centre; Université de Montréal","funders":"Canadian Institutes of Health Research; Michael J. Fox Foundation for Parkinson's Research","keywords":"Parkin; Inflammation; Antigen presentation; Unfolded protein response; Cell biology; Acquired immune system; Innate immune system; Cytotoxic T cell; Immune system; T cell; Antigen; Biology; Antigen-presenting cell; LRRK2; PINK1; TLR4; Antigen processing; Immunology; Parkinson's disease; Disease; Medicine; Genetics; Gene; Endoplasmic reticulum","score_opus":0.012113786070633785,"score_gpt":0.22298374391324613,"score_spread":0.21086995784261234,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4380675113","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933555,0.0032904383,0.0018758189,0.00021298455,0.00004559733,0.000029718014,0.00012471272,0.000051619296,0.0010136573],"genre_scores_gemma":[0.99729496,0.0006312873,0.0006515427,0.00007554781,0.000020542575,0.000040446852,0.000093950846,0.000005801199,0.0011858568],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997918,0.00005643185,0.000019376817,0.000036174773,0.00003064643,0.00006556856],"domain_scores_gemma":[0.9998958,0.000008896067,0.000039533723,0.0000070326187,0.000015484875,0.000033124245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002618608,0.00027016705,0.00029554038,0.00023709598,0.00017667758,0.00026562103,0.00012255486,0.00032862593,0.0011002466],"category_scores_gemma":[0.00009418738,0.000109781155,0.00025869117,0.00009394681,0.00028997363,0.00024996503,0.00023869413,0.0005120543,0.00039716408],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037537975,0.000043325355,0.00051023706,0.00005821302,0.000005386703,0.00021463187,0.000028215478,0.000034246284,0.9979931,0.000072739145,0.00006108176,0.00060357794],"study_design_scores_gemma":[0.00012054486,0.0008099683,0.04412963,0.000026530342,0.00004098048,0.0019527803,0.00026549998,0.0021986165,0.94641316,0.00040204183,0.0036239156,0.00001639442],"about_ca_topic_score_codex":0.000114662434,"about_ca_topic_score_gemma":0.00015307455,"teacher_disagreement_score":0.0011002466,"about_ca_system_score_codex":0.00021912446,"about_ca_system_score_gemma":0.0001219646,"threshold_uncertainty_score":0.003680706},"labels":[],"label_agreement":null},{"id":"W4380872240","doi":"10.1007/s00011-023-01751-x","title":"Loss of TRIM24 promotes IL-10 expression via CBP/p300-dependent IFNβ1 transcription during macrophage activation","year":2023,"lang":"en","type":"article","venue":"Inflammation Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Genetics","funders":"National Natural Science Foundation of China","keywords":"Biology; Lipopolysaccharide; Downregulation and upregulation; Interleukin 10; Knockout mouse; Immunology; Cytokine; Macrophage; Cell biology; Molecular biology; In vitro; Receptor; Gene; Genetics","score_opus":0.04333449121320056,"score_gpt":0.33271299615782,"score_spread":0.2893785049446195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4380872240","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9885162,0.002764013,0.0036265713,0.00036781683,0.00014400006,0.00004270291,0.0015441764,0.00024761155,0.0027469113],"genre_scores_gemma":[0.98897624,0.00058810005,0.0019247305,0.00014218972,0.00002913752,0.00007168072,0.0016008064,0.00007696029,0.0065902476],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99956614,0.000043551558,0.000027003096,0.00008009265,0.000092595794,0.00019053968],"domain_scores_gemma":[0.99974614,0.000032408563,0.000052289626,0.000043398726,0.000024618597,0.00010105153],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022525994,0.00038217037,0.00034800803,0.0004348373,0.00034986195,0.0006565696,0.00043555748,0.00048695813,0.0042913486],"category_scores_gemma":[0.00022461159,0.00026474195,0.00056229037,0.00021387207,0.000453853,0.0003413084,0.00041672363,0.0017532452,0.0020375757],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034223945,0.00003222011,0.00021152734,0.000034416807,0.0000057138855,0.00008373607,0.000015515074,0.000033770284,0.9981008,0.00009257078,0.00014649835,0.00090106355],"study_design_scores_gemma":[0.00003122329,0.00015185087,0.013144355,0.0000137864745,0.000014811408,0.00038802446,0.00014503176,0.00075695745,0.98171896,0.00015349322,0.003470454,0.0000108938575],"about_ca_topic_score_codex":0.001203713,"about_ca_topic_score_gemma":0.0019353357,"teacher_disagreement_score":0.0042913486,"about_ca_system_score_codex":0.0005959814,"about_ca_system_score_gemma":0.00033913282,"threshold_uncertainty_score":0.014356017},"labels":[],"label_agreement":null},{"id":"W4381598306","doi":"10.1007/s40261-023-01278-3","title":"Safety, Tolerability, Bioavailability, and Biological Activity of Inhaled Interferon-α2b in Healthy Adults: The IN2COVID Phase I Randomized Trial","year":2023,"lang":"en","type":"article","venue":"Clinical Drug Investigation","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto; University Health Network","funders":"","keywords":"Tolerability; Medicine; Placebo; Adverse effect; Vital signs; Internal medicine; Bioavailability; Cohort; Randomized controlled trial; Pharmacology; Anesthesia; Pathology","score_opus":0.07083239280995628,"score_gpt":0.37751660517047075,"score_spread":0.30668421236051446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4381598306","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9900405,0.0041353656,0.0005898299,0.00044614976,0.0002769586,0.0016833751,0.0012747265,0.000052180512,0.0015009075],"genre_scores_gemma":[0.9887278,0.0023212256,0.0009896418,0.0010185603,0.00041306746,0.0017404495,0.0020572941,0.000026212143,0.0027057186],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9990375,0.0005146506,0.000055950128,0.00017345614,0.00007487754,0.0001435118],"domain_scores_gemma":[0.9986253,0.0003900264,0.00035762647,0.00015092024,0.000092439666,0.00038372335],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002054067,0.0018037047,0.003203957,0.0003120554,0.00048585027,0.0013750226,0.00085957116,0.0020204585,0.0055443775],"category_scores_gemma":[0.0020604762,0.00071855413,0.0020943796,0.00039190784,0.0013111725,0.0009823542,0.000430802,0.0031694542,0.0009943424],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.9847584,0.002956177,0.0012835214,0.00020103171,0.000820959,0.000023994706,0.00002935903,0.00015737966,0.0018612352,0.000057508405,0.00037366888,0.007476767],"study_design_scores_gemma":[0.9137403,0.0799383,0.0038506603,0.000030740026,0.0007799044,0.00004213585,0.0000265213,0.00025212625,0.0005409561,0.00012876157,0.00065303623,0.00001661981],"about_ca_topic_score_codex":0.0010433875,"about_ca_topic_score_gemma":0.0013785622,"teacher_disagreement_score":0.0055443775,"about_ca_system_score_codex":0.0010645544,"about_ca_system_score_gemma":0.0010843034,"threshold_uncertainty_score":0.018547773},"labels":[],"label_agreement":null},{"id":"W4381682244","doi":"10.1016/j.cell.2023.05.039","title":"Cooperative sensing of mitochondrial DNA by ZBP1 and cGAS promotes cardiotoxicity","year":2023,"lang":"en","type":"article","venue":"Cell","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":257,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of Environmental Health Sciences; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; National Cancer Institute; National Institutes of Health; National Heart, Lung, and Blood Institute; Israel National Road Safety Authority; American Heart Association","keywords":"Biology; Mitochondrial DNA; Cell biology; Mitochondrion; Innate immune system; Interferon; Genome instability; DNA damage; DNA; Genetics; Immune system; Gene","score_opus":0.009628978409601634,"score_gpt":0.22785872448844588,"score_spread":0.21822974607884424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4381682244","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99439347,0.0014730818,0.003093039,0.000104378516,0.000020172252,0.000010777039,0.000118250304,0.00005365731,0.0007332203],"genre_scores_gemma":[0.99825186,0.00031771636,0.0006148417,0.000027296875,0.0000043103646,0.000009507028,0.000095611336,0.0000046407677,0.00067428884],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998816,0.000017376029,0.000006811472,0.000027870095,0.000029254807,0.00003711651],"domain_scores_gemma":[0.9999075,0.000010687538,0.000035627912,0.000009077924,0.000008502332,0.00002868265],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012662385,0.00026210558,0.00021221452,0.00012265038,0.00010741018,0.00021147101,0.0001278785,0.00024026574,0.00086066365],"category_scores_gemma":[0.0000764006,0.00008217932,0.0001517143,0.00007835334,0.0001909502,0.00017407165,0.00023680407,0.00047507978,0.00025750362],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007903132,0.000009323988,0.00019918178,0.000011551445,0.0000015553859,0.000020210138,0.0000042740876,0.000022944349,0.9991002,0.00004384277,0.0000148355875,0.0004929998],"study_design_scores_gemma":[0.0000111904665,0.00025455494,0.008103132,0.000005032388,0.00000775902,0.00017208567,0.000030632516,0.00093564834,0.98953,0.00006211885,0.00088502816,0.0000026688908],"about_ca_topic_score_codex":0.0001767443,"about_ca_topic_score_gemma":0.00032657804,"teacher_disagreement_score":0.00086066365,"about_ca_system_score_codex":0.00024908286,"about_ca_system_score_gemma":0.00011141251,"threshold_uncertainty_score":0.0028792024},"labels":[],"label_agreement":null},{"id":"W4381685212","doi":"10.1186/s13058-023-01652-1","title":"RHAMM regulates MMTV-PyMT-induced lung metastasis by connecting STING-dependent DNA damage sensing to interferon/STAT1 pro-apoptosis signaling","year":2023,"lang":"en","type":"article","venue":"Breast Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Lawson Health Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada; Breast Cancer Society of Canada; Cancer Research Society; American Cancer Society","keywords":"Cancer research; Biology; Metastasis; Tumor progression; Gene knockdown; Interferon; Tumor microenvironment; Cancer; Apoptosis; Immunology; Genetics","score_opus":0.06710727910015991,"score_gpt":0.3773223461844069,"score_spread":0.310215067084247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4381685212","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98346406,0.0025126575,0.0071225828,0.00025590495,0.00006246068,0.00004383302,0.0028314632,0.0004886112,0.0032184524],"genre_scores_gemma":[0.99334913,0.0005044262,0.001992311,0.00009140048,0.000009536227,0.00002728507,0.0011125183,0.00004534613,0.002867923],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998447,0.000021033726,0.0000137902025,0.000038039318,0.00004542795,0.00003700141],"domain_scores_gemma":[0.9998863,0.0000109688035,0.000042553882,0.000012333028,0.00001353569,0.00003421717],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009954674,0.00028492487,0.00019563644,0.00022234215,0.00017809359,0.00034808335,0.00017739448,0.00024811344,0.002097173],"category_scores_gemma":[0.00010077107,0.0001283525,0.00031919996,0.00014147758,0.00023115551,0.00017390642,0.00022980123,0.00067344913,0.0007147633],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008924637,0.000009680199,0.00037843134,0.000031520914,0.000003478062,0.000047414575,0.000006996138,0.00006779367,0.9984175,0.00008467487,0.000081922306,0.00078124716],"study_design_scores_gemma":[0.000012372104,0.00010086196,0.013601466,0.000013709815,0.00001924696,0.00023201668,0.00003436401,0.0022999705,0.9804962,0.00009764918,0.003086479,0.000005608994],"about_ca_topic_score_codex":0.00077064196,"about_ca_topic_score_gemma":0.0008820435,"teacher_disagreement_score":0.002097173,"about_ca_system_score_codex":0.00043881795,"about_ca_system_score_gemma":0.00020171261,"threshold_uncertainty_score":0.007015705},"labels":[],"label_agreement":null},{"id":"W4381849666","doi":"10.1007/s10126-023-10225-4","title":"Transcriptome Analysis of the Spleen Provides Insight into the Immune Regulation of GCRV Resistance in Grass Carp (Ctenopharyngodon idella)","year":2023,"lang":"en","type":"article","venue":"Marine Biotechnology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China","keywords":"Grass carp; Biology; Transcriptome; Immune system; Signal transduction; Downregulation and upregulation; Cell biology; Immunology; Gene; Gene expression; Genetics; Fishery","score_opus":0.008530288925914132,"score_gpt":0.22586207602539,"score_spread":0.21733178709947587,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4381849666","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99257153,0.000706248,0.0027812992,0.000074228934,0.000014438625,0.000010955056,0.0013218826,0.00006505048,0.0024544306],"genre_scores_gemma":[0.9896561,0.00046819844,0.0024403112,0.0001062919,0.000016706115,0.00002669441,0.0017892015,0.0000572676,0.00543919],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999329,0.0000048257875,0.0000027551184,0.000028296941,0.000011440644,0.000019840336],"domain_scores_gemma":[0.99994576,0.000007299794,0.000013850146,0.0000049172263,0.00001351957,0.000014728857],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007782196,0.00027635306,0.00027229372,0.0004221518,0.0002897636,0.00038226496,0.00010937052,0.00024197083,0.001296047],"category_scores_gemma":[0.00006517014,0.00014228877,0.00030856658,0.00022425831,0.00018610612,0.0002554476,0.0002716714,0.00040657233,0.0003935476],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004347457,0.0000035975495,0.0008385344,0.00001474202,0.000002000473,0.0000274429,0.000018769948,0.0000223139,0.9982332,0.00003527524,0.000018381206,0.00074218074],"study_design_scores_gemma":[0.000026193773,0.00048741375,0.5270635,0.000038540118,0.00010848147,0.00072106806,0.0007817753,0.002746917,0.46234316,0.00060424884,0.0050438954,0.00003485208],"about_ca_topic_score_codex":0.00093787926,"about_ca_topic_score_gemma":0.0019692313,"teacher_disagreement_score":0.001296047,"about_ca_system_score_codex":0.00021272969,"about_ca_system_score_gemma":0.0002124678,"threshold_uncertainty_score":0.0043357015},"labels":[],"label_agreement":null},{"id":"W4382201857","doi":"10.17504/protocols.io.yxmvmk2x5g3p/v2","title":"Mitochondrial Antigen Presentation in RAW macrophages v2","year":2021,"lang":"en","type":"preprint","venue":"","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University","funders":"","keywords":"Antigen presentation; Antigen; MHC class I; Virology; Antigen processing; CD8; Major histocompatibility complex; Molecular biology; Chemistry; Biology; T cell; Immune system; Immunology","score_opus":0.01588516664367687,"score_gpt":0.28233970379905676,"score_spread":0.26645453715537987,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382201857","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32648054,0.007923903,0.41705626,0.0017190366,0.0037228805,0.010919812,0.09647405,0.012492887,0.1232106],"genre_scores_gemma":[0.30668953,0.0059474176,0.23841414,0.0010624245,0.0005185157,0.014556706,0.22161728,0.0045971125,0.2065968],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99827576,0.00031086896,0.0001712298,0.00037397494,0.0005273414,0.0003408261],"domain_scores_gemma":[0.99953353,0.00008542485,0.00002838484,0.00019297143,0.00010917911,0.000050598795],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00095600553,0.0018057475,0.00075783586,0.000838684,0.00094730087,0.0008610446,0.0016750563,0.00086779613,0.0218373],"category_scores_gemma":[0.0004033475,0.00072302175,0.00092159916,0.0008052978,0.0004195925,0.00052790594,0.00088347046,0.0026120225,0.031659923],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029769295,0.00010177292,0.000064016574,0.00019492743,0.000012996606,0.00006111429,0.00009911063,0.00009276159,0.9903554,0.0010583143,0.0026916922,0.0049701734],"study_design_scores_gemma":[0.00007406089,0.00023741036,0.0009819472,0.000035952202,0.000015866326,0.00017552519,0.000026158203,0.00052360876,0.94446695,0.0003038237,0.053136677,0.000021993996],"about_ca_topic_score_codex":0.0008887554,"about_ca_topic_score_gemma":0.0013305873,"teacher_disagreement_score":0.0218373,"about_ca_system_score_codex":0.00059023936,"about_ca_system_score_gemma":0.0005752326,"threshold_uncertainty_score":0.073053},"labels":[],"label_agreement":null},{"id":"W4383067588","doi":"10.1038/s41419-023-05923-9","title":"E3 ligase HECTD3 promotes RNA virus replication and virus-induced inflammation via K33-linked polyubiquitination of PKR","year":2023,"lang":"en","type":"article","venue":"Cell Death and Disease","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Second Military Medical University; Chinese Academy of Medical Sciences; Government of Jiangsu Province; Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences; Directorate for Biological Sciences; Chinese Academy of Sciences; National Natural Science Foundation of China","keywords":"Protein kinase R; Viral replication; Biology; Ubiquitin ligase; Virus; Ubiquitin; Virology; RNA silencing; Cell biology; RNA; RNA virus; Kinase; Protein kinase A; RNA interference; Mitogen-activated protein kinase kinase; Genetics; Gene","score_opus":0.017416138552853105,"score_gpt":0.2576466037983409,"score_spread":0.24023046524548783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4383067588","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99046624,0.0031537989,0.0045828726,0.00026213707,0.000044200086,0.000019291696,0.0003280403,0.00009628037,0.0010471414],"genre_scores_gemma":[0.9977568,0.0003760513,0.00085611857,0.000044747594,0.000004053427,0.000009733074,0.0002047781,0.000004844484,0.0007429806],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998692,0.000024334035,0.000014545281,0.000023347977,0.00002515758,0.00004334934],"domain_scores_gemma":[0.9999393,0.0000044563644,0.000024495075,0.000005967445,0.0000061110045,0.000019759682],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016248041,0.00024249557,0.00023841008,0.00011743433,0.00018588692,0.00022976377,0.0001339668,0.00023825803,0.0009037085],"category_scores_gemma":[0.00009425135,0.00010931609,0.00031707893,0.00010283348,0.00023779258,0.00013764414,0.00023895326,0.00044433356,0.00019466293],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003162979,0.000025505635,0.0006185097,0.00005727718,0.000011370386,0.00008404552,0.00000720143,0.000074874275,0.99738604,0.00010943981,0.00006607379,0.0012433726],"study_design_scores_gemma":[0.00004774027,0.0002617362,0.00928432,0.0000066860453,0.00002106169,0.00069868815,0.00003382642,0.0013450244,0.9855057,0.00013167413,0.0026568053,0.0000067868227],"about_ca_topic_score_codex":0.00032571517,"about_ca_topic_score_gemma":0.0005352943,"teacher_disagreement_score":0.0009037085,"about_ca_system_score_codex":0.00029255974,"about_ca_system_score_gemma":0.00023424791,"threshold_uncertainty_score":0.0030231476},"labels":[],"label_agreement":null},{"id":"W4383199289","doi":"10.1371/journal.pone.0284061","title":"Nucleic acid sensor STING drives remodeling and its inhibition enhances steroid responsiveness in chronic obstructive pulmonary disease","year":2023,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Sting; COPD; Medicine; Inflammation; Dexamethasone; Pathogenesis; Immunology; Pharmacology; Internal medicine; Cancer research","score_opus":0.03410114068682293,"score_gpt":0.24962645655279622,"score_spread":0.2155253158659733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4383199289","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9850647,0.010851564,0.0015958434,0.00026828513,0.000086985376,0.000042331474,0.00046459475,0.00008481305,0.0015409177],"genre_scores_gemma":[0.9953921,0.0026969013,0.0006154067,0.00008463812,0.00002558036,0.0000208874,0.00030103358,0.000005590214,0.00085794844],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984944,0.000021806198,0.000013965498,0.000025929452,0.00005271378,0.000036186248],"domain_scores_gemma":[0.9999082,0.000010008272,0.000029485433,0.0000066505495,0.000013500264,0.000032198215],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015638923,0.00023159364,0.00027529304,0.0002022993,0.0001567169,0.00030413768,0.00010557132,0.00025194447,0.0015791316],"category_scores_gemma":[0.00014322996,0.00010365624,0.00039187158,0.00012093921,0.00020850264,0.00019728769,0.00021219651,0.00056420104,0.00027893527],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020903863,0.000037336787,0.001524375,0.00010666919,0.000008696124,0.00008663042,0.00001991694,0.000049505536,0.9948696,0.000053491556,0.00008259682,0.002952074],"study_design_scores_gemma":[0.00005119626,0.0015126033,0.079871975,0.000058245132,0.00008274553,0.0009524688,0.00020182348,0.0016010784,0.9093343,0.00018796236,0.0061294567,0.000016259566],"about_ca_topic_score_codex":0.00031056255,"about_ca_topic_score_gemma":0.0005272801,"teacher_disagreement_score":0.0015791316,"about_ca_system_score_codex":0.00027895017,"about_ca_system_score_gemma":0.00018572588,"threshold_uncertainty_score":0.0052827597},"labels":[],"label_agreement":null},{"id":"W4383314039","doi":"10.1371/journal.ppat.1011477","title":"Changes in SUMO-modified proteins in Epstein-Barr virus infection identifies reciprocal regulation of TRIM24/28/33 complexes and the lytic switch BZLF1","year":2023,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Cancer Research UK Cambridge Institute, University of Cambridge; Canadian Institutes of Health Research; Cancer Research UK; Wellcome Trust; Wellcome","keywords":"Lytic cycle; BZLF1; Biology; Virus; Virology; Cell biology; Herpesviridae","score_opus":0.031550154836745545,"score_gpt":0.25958637999798256,"score_spread":0.228036225161237,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4383314039","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99768806,0.0008951404,0.00086871994,0.000029549534,0.0000054442016,0.0000059185422,0.00015661906,0.000018456602,0.00033205427],"genre_scores_gemma":[0.9971336,0.0003949315,0.0011631352,0.000029619594,0.000003100141,0.000011450232,0.0003593967,0.0000074544328,0.00089718995],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998983,0.000014021551,0.0000089782525,0.000025767085,0.000023995584,0.00002893101],"domain_scores_gemma":[0.99992454,0.000009022693,0.00002491212,0.000008671513,0.000009317702,0.000023569368],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014557828,0.00018842466,0.0001635854,0.00022095349,0.00021002782,0.0002460601,0.00012737467,0.0002623046,0.0011797099],"category_scores_gemma":[0.00012993539,0.00017746148,0.00022452296,0.00018582384,0.00018037285,0.00021379457,0.00023933266,0.00044714386,0.00035159258],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000096538446,0.0000052999517,0.0007967655,0.0000122360525,0.0000040943332,0.00003872991,0.000014275617,0.0000121161365,0.9985411,0.000026355496,0.000011505478,0.00044103828],"study_design_scores_gemma":[0.000010524516,0.00012671253,0.11503598,0.000005633217,0.000020859103,0.00074837543,0.00011352276,0.0009001589,0.8817149,0.00013678435,0.001177759,0.000008871706],"about_ca_topic_score_codex":0.0003833815,"about_ca_topic_score_gemma":0.0006417148,"teacher_disagreement_score":0.0011797099,"about_ca_system_score_codex":0.00022691938,"about_ca_system_score_gemma":0.00010705363,"threshold_uncertainty_score":0.003946483},"labels":[],"label_agreement":null},{"id":"W4384523771","doi":"10.7554/elife.86200","title":"p38γ and p38δ modulate innate immune response by regulating MEF2D activation","year":2023,"lang":"en","type":"article","venue":"eLife","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity; Université de Montréal; McGill University; Institute for Research in Immunology and Cancer","funders":"Medical Research Council; Agencia Estatal de Investigación; Ministerio de Educación y Formación Profesional; Universidad Autónoma de Madrid; Cancer Research UK; Ministerio de Ciencia e Innovación; Wellcome Trust; Francis Crick Institute; Centro Nacional de Biotecnología; University of Dundee","keywords":"Innate immune system; Cell biology; Immune system; Biology; Immunology","score_opus":0.012986717379855328,"score_gpt":0.2555115343238494,"score_spread":0.24252481694399405,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384523771","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99041057,0.0022914866,0.0046087466,0.00019331026,0.00004670873,0.000035949943,0.00053897465,0.000090475594,0.0017837735],"genre_scores_gemma":[0.9937323,0.0009211048,0.002424114,0.00005257587,0.0000153015,0.0000767614,0.00032606345,0.000012854103,0.002438957],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998062,0.000026021398,0.000017941062,0.00004826946,0.000041434858,0.000060082628],"domain_scores_gemma":[0.99990344,0.000009408404,0.00003537847,0.000009404242,0.000009220562,0.000033162527],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021129203,0.0005482198,0.00015250925,0.00036568881,0.00020978785,0.00025377236,0.00023670474,0.00028364206,0.0018435417],"category_scores_gemma":[0.000113004186,0.00018414187,0.00029166075,0.00013724544,0.00031001525,0.00026090012,0.0002728592,0.00057119044,0.0003654578],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018555488,0.00003065274,0.00038108483,0.00004139661,0.0000041458857,0.000053808522,0.000014730338,0.00004361709,0.99789125,0.00010302265,0.000037466765,0.0012133289],"study_design_scores_gemma":[0.000052865118,0.00021134918,0.010561904,0.000011439188,0.00001299661,0.0002626711,0.00004355643,0.00071874826,0.9859774,0.0001887782,0.0019526801,0.0000054942907],"about_ca_topic_score_codex":0.00018091334,"about_ca_topic_score_gemma":0.00027918536,"teacher_disagreement_score":0.0018435417,"about_ca_system_score_codex":0.0002350289,"about_ca_system_score_gemma":0.0001525295,"threshold_uncertainty_score":0.006167233},"labels":[],"label_agreement":null},{"id":"W4384785961","doi":"10.2139/ssrn.4496478","title":"Hypersensitive Response to Interferon-Stimulated Gene (ISG)-Inducing Double-Stranded RNA in American Bullfrog Tadpole Fibroblasts","year":2023,"lang":"en","type":"preprint","venue":"SSRN Electronic Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"","keywords":"Bullfrog; Tadpole (physics); Interferon; Gene; Biology; RNA; Cell biology; Molecular biology; Virology; Genetics; Physics; Endocrinology","score_opus":0.020045463720094362,"score_gpt":0.28204948544247993,"score_spread":0.26200402172238557,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384785961","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994551,0.00074273656,0.0013633119,0.00006407105,0.000030428911,0.000027296755,0.0005771186,0.000040902552,0.0026031279],"genre_scores_gemma":[0.9907946,0.0003994322,0.0010156698,0.00007899889,0.000016837072,0.000035777717,0.001235869,0.000024421865,0.0063983616],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981374,0.000045464643,0.000021512444,0.000047147834,0.00003675945,0.00003545747],"domain_scores_gemma":[0.99973994,0.00012609927,0.000032568576,0.00003923791,0.000025614712,0.000036593534],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022668538,0.0002611385,0.00026451613,0.00033582668,0.0002332866,0.00027294172,0.00021679816,0.00028983376,0.0031782463],"category_scores_gemma":[0.00014316673,0.00015661366,0.00028821957,0.00016596913,0.00016487071,0.00014213039,0.00018687324,0.00048601654,0.00074829283],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000073003015,0.000013829375,0.00019968188,0.000014153428,0.000004584484,0.000071655835,0.000026580637,0.000025379171,0.99917775,0.00005497985,0.000034344503,0.00030405482],"study_design_scores_gemma":[0.000032388918,0.0005771328,0.027762763,0.000007643882,0.000033298424,0.0003692246,0.00015097573,0.00084474013,0.96763355,0.0000614874,0.0025189489,0.0000077203385],"about_ca_topic_score_codex":0.0030727994,"about_ca_topic_score_gemma":0.0027503085,"teacher_disagreement_score":0.0031782463,"about_ca_system_score_codex":0.00028651897,"about_ca_system_score_gemma":0.00013462461,"threshold_uncertainty_score":0.010632277},"labels":[],"label_agreement":null},{"id":"W4384933237","doi":"10.3390/cancers15143689","title":"Loss of PARP7 Increases Type I Interferon Signaling in EO771 Breast Cancer Cells and Prevents Mammary Tumor Growth by Increasing Antitumor Immunity","year":2023,"lang":"en","type":"article","venue":"Cancers","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"Mattilsynet; Canadian Institutes of Health Research; Hokkaido University; Norges Forskningsråd","keywords":"Cancer research; Interferon; Mammary tumor; Diphtheria toxin; Cytotoxic T cell; Biology; CD8; Immune system; Cancer; Immunology; In vitro; Breast cancer; Toxin","score_opus":0.010590457697862914,"score_gpt":0.2507742593744161,"score_spread":0.2401838016765532,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384933237","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99490863,0.0011144406,0.0010501576,0.00015809025,0.000044652934,0.000027824732,0.00077801716,0.000111685746,0.0018065237],"genre_scores_gemma":[0.9932997,0.00079726643,0.0011777228,0.000092278926,0.000012147426,0.000056425764,0.0012993426,0.000032457923,0.0032326079],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979645,0.000024357361,0.000025961928,0.000033794666,0.00006150808,0.000057981702],"domain_scores_gemma":[0.99984396,0.000023736031,0.000045736255,0.000026056128,0.000013850584,0.00004658049],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014330796,0.00035982084,0.00027769877,0.0002444357,0.0001136126,0.00027311844,0.0002554605,0.0003327809,0.0018874767],"category_scores_gemma":[0.00010194004,0.00016121527,0.0002802425,0.00017446165,0.00023122011,0.00023318965,0.00014918418,0.0009648491,0.0007631588],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020914071,0.00009579096,0.00022513443,0.000032688473,0.0000057201382,0.00003642989,0.000008703358,0.00007550795,0.9980102,0.00006635296,0.000074746065,0.0011595014],"study_design_scores_gemma":[0.000035110672,0.00067533675,0.003678237,0.000005258473,0.000013195615,0.0001628606,0.000029635026,0.0007294629,0.9931403,0.000034764187,0.0014922126,0.000003626452],"about_ca_topic_score_codex":0.00033657652,"about_ca_topic_score_gemma":0.0004492105,"teacher_disagreement_score":0.0018874767,"about_ca_system_score_codex":0.00027857118,"about_ca_system_score_gemma":0.00021252554,"threshold_uncertainty_score":0.006314218},"labels":[],"label_agreement":null},{"id":"W4385442670","doi":"10.1007/s00262-023-03509-0","title":"Reovirus combined with a STING agonist enhances anti-tumor immunity in a mouse model of colorectal cancer","year":2023,"lang":"en","type":"article","venue":"Cancer Immunology Immunotherapy","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Japan Society for the Promotion of Science; Nagoya City University","keywords":"Oncolytic virus; Interferon; Sting; Innate immune system; Immune system; Stimulator of interferon genes; Biology; Immunity; Tumor microenvironment; Cancer research; Immunotherapy; Immunology","score_opus":0.02208788827978729,"score_gpt":0.2857743054169383,"score_spread":0.263686417137151,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385442670","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99381256,0.0013963252,0.0016078847,0.00035135425,0.0002632566,0.00010519549,0.0005189996,0.0002545487,0.0016898386],"genre_scores_gemma":[0.991285,0.0010916474,0.0017148812,0.00014457235,0.00007933826,0.00012276202,0.0004720531,0.00004801698,0.00504159],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995566,0.000084088926,0.00003162692,0.00007298099,0.00008810159,0.00016669706],"domain_scores_gemma":[0.9996088,0.00006575655,0.00009679017,0.00005392489,0.000019657367,0.00015515661],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003659136,0.0011142816,0.0006385433,0.0010825972,0.0002545847,0.00051523204,0.00044494538,0.00095438247,0.0016953358],"category_scores_gemma":[0.00019071823,0.00037335046,0.00070172956,0.00032608243,0.0005491742,0.0005296352,0.00017781123,0.0027239681,0.0005136937],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018800478,0.0008714424,0.0001328794,0.000067574816,0.000014856836,0.00011228264,0.000023038714,0.00022056597,0.99466115,0.00018426587,0.00014738023,0.0016845394],"study_design_scores_gemma":[0.00034722357,0.007760942,0.0020186603,0.00002521639,0.00007695785,0.00028863692,0.00005840491,0.002054043,0.9852969,0.00011478382,0.0019417432,0.000016594471],"about_ca_topic_score_codex":0.0008382781,"about_ca_topic_score_gemma":0.001482047,"teacher_disagreement_score":0.0016953358,"about_ca_system_score_codex":0.0005203474,"about_ca_system_score_gemma":0.00042291384,"threshold_uncertainty_score":0.0056714416},"labels":[],"label_agreement":null},{"id":"W4385564422","doi":"10.1002/jmv.29013","title":"NLRC4 promotes the cGAS‐STING signaling pathway by facilitating CBL‐mediated K63‐linked polyubiquitination of TBK1","year":2023,"lang":"en","type":"article","venue":"Journal of Medical Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"TANK-binding kinase 1; Ubiquitin ligase; Gene knockdown; NLRC4; Cell biology; Innate immune system; Biology; Ubiquitin; Phosphorylation; Interferon; Signal transduction; Inflammasome; Virology; Immunology; MAP kinase kinase kinase; Protein kinase A; Biochemistry; Immune system; Gene; Caspase 1; Inflammation","score_opus":0.018158092215391254,"score_gpt":0.27610150437469894,"score_spread":0.25794341215930766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385564422","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9910693,0.0026524204,0.003771128,0.00015812971,0.00004096723,0.000023005949,0.0003257049,0.00022460215,0.0017347735],"genre_scores_gemma":[0.99457586,0.0005568478,0.0017708963,0.000028558348,0.0000094007455,0.000022597676,0.00031960185,0.000022109089,0.0026940862],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982363,0.00003701524,0.000017408725,0.0000338634,0.00003810503,0.000049939208],"domain_scores_gemma":[0.99987745,0.000010642801,0.00004732942,0.00002051248,0.00001440755,0.000029618617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015145238,0.00044096634,0.000230742,0.00026265744,0.0001601854,0.00028384873,0.00024611855,0.00022495235,0.0018886377],"category_scores_gemma":[0.000113079535,0.00012324653,0.00028449218,0.00012633922,0.0002808518,0.00022476628,0.00027058905,0.00041787705,0.0006407147],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009084024,0.000009817381,0.000107716834,0.00002875975,0.0000022962283,0.000026135827,0.000004251966,0.00003838675,0.99928004,0.00005269326,0.000022849008,0.00033618504],"study_design_scores_gemma":[0.000018418263,0.000075988784,0.0029126382,0.0000048307975,0.000008173678,0.00014363152,0.000013151897,0.0006618259,0.9942778,0.00004149753,0.0018395331,0.000002617909],"about_ca_topic_score_codex":0.0005437334,"about_ca_topic_score_gemma":0.00039866602,"teacher_disagreement_score":0.0018886377,"about_ca_system_score_codex":0.00046131664,"about_ca_system_score_gemma":0.00023126422,"threshold_uncertainty_score":0.0063180923},"labels":[],"label_agreement":null},{"id":"W4385637909","doi":"10.1101/2023.08.04.551993","title":"Induction of antiviral Interferon-Stimulated Genes (ISGs) by neuronal STING promotes the resolution of pain","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; University of Calgary","funders":"Canadian Institutes of Health Research; Alberta Children's Hospital Research Institute; Crohn's and Colitis Canada","keywords":"Stimulator of interferon genes; Sting; Nociceptor; Inflammation; Interferon; Hyperalgesia; TANK-binding kinase 1; Nociception; Medicine; Neuroscience; Cell biology; Immunology; Biology; Kinase; Receptor; Innate immune system; Immune system; Protein kinase A; Internal medicine","score_opus":0.02257278142429177,"score_gpt":0.23183562096531,"score_spread":0.2092628395410182,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385637909","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9884477,0.0011581719,0.005066632,0.00027857145,0.00008451463,0.000016682709,0.0005953159,0.00020106163,0.004151332],"genre_scores_gemma":[0.99334866,0.0003861833,0.001985673,0.00007462234,0.000019044173,0.000013601899,0.0003257449,0.000032324555,0.003814178],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999137,0.0000109910525,0.0000069262014,0.000018755487,0.000026129042,0.00002356727],"domain_scores_gemma":[0.9999323,0.000007266364,0.000021515609,0.0000110537185,0.0000078223175,0.000020003408],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011076603,0.00018963114,0.00014590917,0.00020669446,0.00011118317,0.00025297084,0.000102649385,0.00019685403,0.0023908527],"category_scores_gemma":[0.00008953135,0.000064491025,0.00018947317,0.000110754714,0.0002336987,0.00015380754,0.00017287213,0.00052544085,0.0005801533],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000071529095,0.000008542679,0.00027339067,0.000016999713,0.000001918624,0.000030746654,0.0000058464284,0.00003594586,0.99857736,0.00016386184,0.00005232407,0.0007616168],"study_design_scores_gemma":[0.000018695002,0.000105978856,0.009971253,0.000011750423,0.000007064014,0.00022271066,0.000031467123,0.0011754454,0.9858592,0.00024300344,0.0023508046,0.0000026953492],"about_ca_topic_score_codex":0.0001802616,"about_ca_topic_score_gemma":0.00022837054,"teacher_disagreement_score":0.0023908527,"about_ca_system_score_codex":0.00025490433,"about_ca_system_score_gemma":0.00011745068,"threshold_uncertainty_score":0.007998228},"labels":[],"label_agreement":null},{"id":"W4385655001","doi":"10.1097/01.hs9.0000974372.45108.8e","title":"PB1887: STING AGONIST FOR THE TREATMENT OF RELAPSED/REFRACTORY ACUTE MYELOID LEUKEMIA AND HIGH-RISK MYELODYSPLASTIC SYNDROME: A FIRST-IN-CLINIC PHASE 1 STUDY OF GSK3745417","year":2023,"lang":"en","type":"article","venue":"HemaSphere","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"","keywords":"Myeloid leukemia; Medicine; Sting; Myelodysplastic syndromes; Leukemia; Azacitidine; Tolerability; Stimulator of interferon genes; Internal medicine; Cancer research; Immunology; Bone marrow; Oncology; Immune system; Innate immune system; Biology; Adverse effect","score_opus":0.021151025363478813,"score_gpt":0.28826571158633224,"score_spread":0.26711468622285345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385655001","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9050512,0.06871035,0.0014933321,0.003573141,0.0009817131,0.0038988309,0.005988555,0.0006028368,0.009700062],"genre_scores_gemma":[0.9067931,0.054599445,0.003405244,0.0060361093,0.0006073964,0.0033958345,0.008461353,0.0001272224,0.016574206],"study_design_codex":"design_other","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.99988985,0.00003705015,0.000007321843,0.000016720353,0.000016212136,0.00003289889],"domain_scores_gemma":[0.99982905,0.000024381443,0.000036719543,0.000010540913,0.000019049121,0.00008018764],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061945216,0.0007403169,0.001519054,0.00025979182,0.00019201226,0.00080148346,0.0005257567,0.00083424605,0.0072216243],"category_scores_gemma":[0.00033132726,0.0002826882,0.0014108937,0.00022248742,0.00034575205,0.00046664343,0.00023590562,0.0024519674,0.0014354371],"study_design_candidate":"nonrandomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.19631948,0.038375247,0.0049416563,0.009717979,0.003759557,0.000727634,0.00054105336,0.0040645907,0.08869965,0.0015344617,0.049764592,0.60155416],"study_design_scores_gemma":[0.473882,0.41696075,0.020535557,0.0009824554,0.0029861657,0.0019326527,0.000276124,0.0033130643,0.015986385,0.0011276278,0.06190108,0.00011621057],"about_ca_topic_score_codex":0.0007891095,"about_ca_topic_score_gemma":0.002690753,"teacher_disagreement_score":0.0072216243,"about_ca_system_score_codex":0.00040705284,"about_ca_system_score_gemma":0.0008099048,"threshold_uncertainty_score":0.024158716},"labels":[],"label_agreement":null},{"id":"W4385683729","doi":"10.1128/jvi.00604-23","title":"Cleavage of 14-3-3ε by the enteroviral 3C protease dampens RIG-I-mediated antiviral signaling","year":2023,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Government of Canada; University of Regina; University of Washington","keywords":"Biology; RIG-I; MDA5; Cell biology; Innate immune system; Immunoprecipitation; Proteases; IRF3; RNA; Interferon; RNA interference; Virology; Receptor; Gene; Biochemistry","score_opus":0.0118164274942079,"score_gpt":0.25115851190766975,"score_spread":0.23934208441346186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385683729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953382,0.0010531751,0.002445521,0.000088080946,0.000030357367,0.0000146313505,0.00015533066,0.00003904429,0.0008355234],"genre_scores_gemma":[0.99782014,0.0002173764,0.0010151851,0.00007544816,0.0000043172818,0.000009013541,0.00021140656,0.000010610878,0.0006364491],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997938,0.00003220601,0.000020316302,0.000035023335,0.00005103311,0.000067677945],"domain_scores_gemma":[0.99982077,0.000026278269,0.00005805698,0.00002605135,0.000022758328,0.00004612217],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001987377,0.00037878827,0.00024250505,0.00013640315,0.00014037956,0.0003999231,0.00016411973,0.00032479575,0.0013198678],"category_scores_gemma":[0.00019764957,0.00013912996,0.00043011917,0.00008859129,0.00033306755,0.00024142422,0.00028804157,0.00073747005,0.0004830219],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013975753,0.000021177944,0.00026567135,0.000020022271,0.0000070955502,0.000046660873,0.000007793219,0.000048297527,0.99882406,0.00007128299,0.00002549437,0.0005225376],"study_design_scores_gemma":[0.000015519196,0.00014203109,0.0064357226,0.000009536167,0.000009688446,0.00037809188,0.000028317068,0.0013975445,0.99029154,0.000101594145,0.001185205,0.0000051968273],"about_ca_topic_score_codex":0.00046139932,"about_ca_topic_score_gemma":0.0004467785,"teacher_disagreement_score":0.0013198678,"about_ca_system_score_codex":0.00035179828,"about_ca_system_score_gemma":0.00023471517,"threshold_uncertainty_score":0.0044153333},"labels":[],"label_agreement":null},{"id":"W4385684664","doi":"10.4049/jimmunol.2200799","title":"The RNA-Splicing Ligase RTCB Promotes Influenza A Virus Replication by Suppressing Innate Immunity via Interaction with RNA Helicase DDX1","year":2023,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Peking University; National Natural Science Foundation of China","keywords":"Biology; RNA splicing; Innate immune system; RNA Helicase A; Ubiquitin ligase; Cell biology; RNA; Viral replication; Influenza A virus; Virus; Helicase; Virology; Gene; Immune system; Ubiquitin; Immunology; Genetics","score_opus":0.01961917809064831,"score_gpt":0.29048673505487593,"score_spread":0.2708675569642276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385684664","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98777235,0.006926908,0.0032461274,0.0001694033,0.00004821037,0.000018490011,0.0002507791,0.00010546002,0.0014623164],"genre_scores_gemma":[0.9962847,0.00086730946,0.00095742923,0.000041574356,0.000012794505,0.000014752164,0.00023250446,0.000011821015,0.0015771097],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982506,0.000035070185,0.0000103023685,0.000043396318,0.000038474405,0.000047741],"domain_scores_gemma":[0.99992263,0.000009222463,0.00002090422,0.0000071059967,0.000012979402,0.000027231836],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019371622,0.00033488945,0.00034309176,0.00013231649,0.00016745304,0.00040235728,0.00014193523,0.00020656503,0.0012897091],"category_scores_gemma":[0.00012985896,0.00013918635,0.0002424387,0.000080568905,0.00020307291,0.00017616131,0.00026152795,0.00045086065,0.00033268705],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008267764,0.000008494535,0.0002621205,0.000026809621,0.000004407819,0.000025108015,0.000005090243,0.000033334487,0.998841,0.000053701406,0.000035058863,0.0006221899],"study_design_scores_gemma":[0.000021007332,0.00012429536,0.007189511,0.0000070788437,0.000013607039,0.00020746706,0.000027822205,0.0019144494,0.9879901,0.00006425626,0.002435672,0.0000046972764],"about_ca_topic_score_codex":0.00044593157,"about_ca_topic_score_gemma":0.00048229934,"teacher_disagreement_score":0.0012897091,"about_ca_system_score_codex":0.00029254748,"about_ca_system_score_gemma":0.00026481767,"threshold_uncertainty_score":0.004314482},"labels":[],"label_agreement":null},{"id":"W4385708089","doi":"10.3389/fimmu.2023.1220081","title":"Evolution and expression of the duck TRIM gene repertoire","year":2023,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Alliance de recherche numérique du Canada; Alberta Innovates; Compute Canada","keywords":"Repertoire; Gene; Biology; Genetics; Expression (computer science); Gene expression; Computational biology; Evolutionary biology; Computer science; Art","score_opus":0.007721292706612743,"score_gpt":0.21670072433817628,"score_spread":0.20897943163156354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385708089","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973157,0.0003744119,0.00049055944,0.000018101751,0.0000049727296,0.000003610224,0.0010641837,0.000016087091,0.00071236223],"genre_scores_gemma":[0.9927441,0.00030661275,0.0015987229,0.00008867401,0.00000677412,0.000016901311,0.0032620553,0.000043092055,0.001933183],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99985147,0.000010695401,0.0000072340417,0.00008060938,0.000025531011,0.000024403764],"domain_scores_gemma":[0.99985754,0.000029491363,0.00003395856,0.000014478682,0.000038693972,0.000025707617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011481276,0.00012226375,0.00021023079,0.00047551355,0.0003239809,0.00041724,0.00013286786,0.00025895127,0.00068289065],"category_scores_gemma":[0.00024453874,0.00019717468,0.00020227731,0.0003087013,0.00024473722,0.00019291899,0.00031848287,0.0003189207,0.00040029784],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028790653,0.000016971255,0.10578751,0.00015514309,0.00006332651,0.00029702837,0.0007927807,0.00052519026,0.87629867,0.00021267477,0.00039941072,0.015163507],"study_design_scores_gemma":[0.0000056540252,0.00007788329,0.9701798,0.000031227606,0.000046628546,0.00062176556,0.0004730912,0.0019921625,0.0207424,0.0000993613,0.0057083354,0.000021675747],"about_ca_topic_score_codex":0.0023136914,"about_ca_topic_score_gemma":0.005597455,"teacher_disagreement_score":0.0023136914,"about_ca_system_score_codex":0.00034578503,"about_ca_system_score_gemma":0.00013029197,"threshold_uncertainty_score":0.0046004057},"labels":[],"label_agreement":null},{"id":"W4385741482","doi":"10.3390/ani13162573","title":"The Chicken cGAS–STING Pathway Exerts Interferon-Independent Antiviral Function via Cell Apoptosis","year":2023,"lang":"en","type":"article","venue":"Animals","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; University of Saskatchewan","funders":"National Natural Science Foundation of China","keywords":"Apoptosis; Autophagy; Interferon; Sting; Innate immune system; IRF3; Function (biology); Cell biology; Biology; Immune system; Chemistry; Cancer research; Virology; Immunology; Biochemistry","score_opus":0.012737929210971942,"score_gpt":0.22840709699462963,"score_spread":0.2156691677836577,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385741482","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9906053,0.0026925628,0.0034643624,0.00009355848,0.000030865584,0.00002137868,0.0002717111,0.000085215215,0.0027350283],"genre_scores_gemma":[0.9955361,0.0006902768,0.0014342684,0.0000370278,0.000006147375,0.000012812194,0.00029248514,0.000007131237,0.0019837823],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999027,0.000017480344,0.000010378118,0.000020758025,0.000020442325,0.000028221304],"domain_scores_gemma":[0.99993694,0.000010534764,0.000016227315,0.000012142623,0.000010793685,0.000013305548],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010448269,0.00026208287,0.00016566904,0.00022693838,0.00012597148,0.00020556299,0.00010307254,0.00020280415,0.00073759194],"category_scores_gemma":[0.000064705084,0.00007802356,0.0002454652,0.00008321854,0.00022681357,0.00020102679,0.00013006481,0.00045059703,0.00021751622],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008474706,0.000007240187,0.00028045222,0.000029083583,0.0000029141372,0.00003562362,0.000008803038,0.000029226887,0.99812275,0.00010851259,0.000023437678,0.0012672478],"study_design_scores_gemma":[0.000009208904,0.00017615674,0.0060393126,0.0000064773826,0.000009795669,0.00021199658,0.00002598996,0.0007580191,0.99062777,0.000055611898,0.0020766435,0.000002956379],"about_ca_topic_score_codex":0.00054551783,"about_ca_topic_score_gemma":0.00085465424,"teacher_disagreement_score":0.00073759194,"about_ca_system_score_codex":0.0002948525,"about_ca_system_score_gemma":0.00019323123,"threshold_uncertainty_score":0.0024674535},"labels":[],"label_agreement":null},{"id":"W4385841661","doi":"10.1016/j.dci.2023.104918","title":"Hypersensitive response to interferon-stimulated gene (ISG)-inducing double-stranded RNA in American bullfrog tadpole fibroblasts","year":2023,"lang":"en","type":"article","venue":"Developmental & Comparative Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"Ontario Ministry of Research and Innovation; Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Research, Innovation and Science","keywords":"Bullfrog; Biology; Tadpole (physics); Innate immune system; Interferon; Cell biology; RNA silencing; Molecular biology; Gene expression; Immune system; RNA; Virology; RNA interference; Immunology; Gene; Genetics; Endocrinology","score_opus":0.04018527325477518,"score_gpt":0.3076209045994777,"score_spread":0.26743563134470255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385841661","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941082,0.0007060232,0.0015989757,0.000077968914,0.000036258363,0.000043185068,0.00058572995,0.00004609437,0.002797577],"genre_scores_gemma":[0.99283904,0.00030499455,0.0010405552,0.000083553925,0.00001658504,0.000050104078,0.0009715256,0.00002170445,0.004671983],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999765,0.000061446226,0.000029181623,0.000048647013,0.00004553866,0.000050219867],"domain_scores_gemma":[0.99965346,0.00015857068,0.00004404874,0.000051263673,0.000036745776,0.00005588178],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030961,0.00028538567,0.00025372277,0.00044937455,0.00031573325,0.00030104944,0.0002636216,0.00029915108,0.00266593],"category_scores_gemma":[0.00015198185,0.00020057283,0.000368349,0.00017006688,0.0002058678,0.0001661891,0.00020558534,0.0006474442,0.000615018],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008075576,0.000019247305,0.0002193859,0.000012329547,0.0000050244275,0.00008282471,0.0000300907,0.000027073223,0.9991579,0.00007093384,0.000032298773,0.00026215293],"study_design_scores_gemma":[0.000042938904,0.00071595865,0.02527278,0.000007933352,0.00003484419,0.0003403081,0.0001883138,0.0010484207,0.96988374,0.00005095883,0.0024053694,0.000008607984],"about_ca_topic_score_codex":0.0051842406,"about_ca_topic_score_gemma":0.0060879956,"teacher_disagreement_score":0.0051842406,"about_ca_system_score_codex":0.0003627097,"about_ca_system_score_gemma":0.00019168793,"threshold_uncertainty_score":0.010308087},"labels":[],"label_agreement":null},{"id":"W4385873492","doi":"10.3390/cancers15164127","title":"Conventional DNA-Damaging Cancer Therapies and Emerging cGAS-STING Activation: A Review and Perspectives Regarding Immunotherapeutic Potential","year":2023,"lang":"en","type":"review","venue":"Cancers","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"NOSM University; Laurentian University; University of Ottawa; Université du Québec à Montréal; Ottawa Hospital; Health Sciences North","funders":"Canadian Glycomics Network; Natural Sciences and Engineering Research Council of Canada; Mitacs","keywords":"Cancer immunotherapy; DNA damage; Immunotherapy; Cancer; Tumor microenvironment; Sting; Medicine; Cancer research; Immune system; Immunology; Biology; DNA; Genetics; Internal medicine","score_opus":0.05964593280984219,"score_gpt":0.3487197174867851,"score_spread":0.2890737846769429,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385873492","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00023410222,0.9982963,0.00018943952,0.0003584865,0.00028653358,0.0000033228841,0.000007847483,0.000004658783,0.0006193262],"genre_scores_gemma":[0.0008418432,0.99793005,0.00018844382,0.00028169295,0.00040844554,0.0000066267544,0.000013215197,0.0000011372495,0.0003285052],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998826,0.000026882226,0.000017591703,0.00002445697,0.000034690915,0.000013771223],"domain_scores_gemma":[0.999757,0.0001401515,0.000035805417,0.0000059292715,0.000040201787,0.000021048736],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043550748,0.00071103685,0.000878645,0.0013686625,0.00022865052,0.0008961654,0.0005113688,0.0010869488,0.0015744054],"category_scores_gemma":[0.00040433748,0.00022030053,0.000416881,0.001377002,0.0004910841,0.0014901274,0.00039051115,0.001662872,0.0006919437],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014563961,0.00014715725,0.00031177886,0.029511722,0.0000908576,0.0004972491,0.000256719,0.00079449336,0.010204738,0.01354451,0.03957163,0.9049235],"study_design_scores_gemma":[0.00001062029,0.00022926541,0.0007262789,0.0028327557,0.00008379013,0.0015891514,0.00013070887,0.00017141833,0.001277226,0.0032443493,0.9896808,0.000023632989],"about_ca_topic_score_codex":0.00047411595,"about_ca_topic_score_gemma":0.00082161487,"teacher_disagreement_score":0.0015744054,"about_ca_system_score_codex":0.00055085414,"about_ca_system_score_gemma":0.0007834619,"threshold_uncertainty_score":0.005266905},"labels":[],"label_agreement":null},{"id":"W4386085431","doi":"10.1101/2023.08.22.554371","title":"cGAS/STING and NLRP3 cooperatively activate CD8+ T cell-mediated anti-tumor immunity in colorectal cancer","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Alexandra Hospital; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; University of Alberta; Canadian Institutes of Health Research; Cancer Research Society","keywords":"Inflammasome; Cancer immunotherapy; Immunotherapy; Innate immune system; Cancer research; CD8; T cell; Immune system; Biology; Cytotoxic T cell; Signal transduction; Immunology; Cell biology; Inflammation","score_opus":0.01798214654604948,"score_gpt":0.23889906529951346,"score_spread":0.22091691875346398,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386085431","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940785,0.0020978372,0.0020728896,0.0001170434,0.00004367236,0.000051540683,0.00016425335,0.00016610997,0.0012081716],"genre_scores_gemma":[0.9980064,0.00025432368,0.0010493274,0.000043003525,0.000013836842,0.000028428205,0.00008149141,0.000006248243,0.0005169536],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999819,0.000039672388,0.00001991591,0.00003221896,0.000036206544,0.000052982366],"domain_scores_gemma":[0.99991155,0.000010829187,0.000024893652,0.000012981833,0.000009316053,0.000030447129],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019705383,0.00034117224,0.0002942956,0.00018325262,0.00010446496,0.00020606458,0.00012837087,0.00023292235,0.0011365543],"category_scores_gemma":[0.00012337175,0.00011322747,0.00027955347,0.00010844449,0.00019118086,0.00019606782,0.0002534585,0.00054076436,0.00029775826],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042656227,0.00006702403,0.00041249368,0.000087455766,0.000007467483,0.00004558797,0.000013977877,0.00016010416,0.99577004,0.00005179814,0.000072469986,0.0028850513],"study_design_scores_gemma":[0.0001474223,0.0028152775,0.016906193,0.000020624713,0.000053741576,0.00061900174,0.000060099035,0.004484453,0.97188056,0.00020400016,0.0027996015,0.000009025286],"about_ca_topic_score_codex":0.00014961768,"about_ca_topic_score_gemma":0.00025349236,"teacher_disagreement_score":0.0011365543,"about_ca_system_score_codex":0.00025053025,"about_ca_system_score_gemma":0.00016600806,"threshold_uncertainty_score":0.0038021207},"labels":[],"label_agreement":null},{"id":"W4386118352","doi":"10.1016/j.dci.2023.104973","title":"Evolution and expression of the duck TRIM gene repertoire","year":2023,"lang":"en","type":"article","venue":"Developmental & Comparative Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University; University of Alberta","funders":"","keywords":"Biology; Repertoire; Gene; Genetics; Trim; Expression (computer science); Gene expression; Evolutionary biology; Computational biology","score_opus":0.028441300975263997,"score_gpt":0.26842247075505987,"score_spread":0.2399811697797959,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386118352","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995161,0.0008145506,0.0004928605,0.000073716204,0.0000054574502,0.0000028922616,0.00010171081,0.0000120197665,0.0033358168],"genre_scores_gemma":[0.9958527,0.00042059436,0.0005078024,0.000077668694,0.000007517085,0.0000049922096,0.00016163202,0.000020845495,0.0029463142],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99981314,0.000029989897,0.000007471172,0.00006251183,0.000029442926,0.000057399917],"domain_scores_gemma":[0.9997602,0.000059025177,0.000048616308,0.000033654247,0.000047286518,0.00005115633],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028999962,0.00015403079,0.00022687501,0.00076180196,0.0004287192,0.00058977323,0.00033186722,0.00049266015,0.0013248243],"category_scores_gemma":[0.0002460768,0.00025289872,0.00017811262,0.00033888945,0.00047165988,0.00033192136,0.0004931493,0.00077612064,0.0005315023],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003395516,0.000023099705,0.017625868,0.000050339044,0.000021250227,0.000208085,0.0003580688,0.0004976679,0.95986813,0.0012804337,0.00012863452,0.019598933],"study_design_scores_gemma":[0.000027219809,0.00028250687,0.89783555,0.00007725768,0.000049655486,0.0018539935,0.00092263403,0.0034337963,0.07952862,0.0011336337,0.014798638,0.000056475947],"about_ca_topic_score_codex":0.0023567542,"about_ca_topic_score_gemma":0.0044570356,"teacher_disagreement_score":0.0023567542,"about_ca_system_score_codex":0.0010463798,"about_ca_system_score_gemma":0.00024499078,"threshold_uncertainty_score":0.0075920224},"labels":[],"label_agreement":null},{"id":"W4386127424","doi":"10.1101/2023.08.23.554498","title":"Copy number variation and population-specific immune genes in the model vertebrate zebrafish","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Deutsche Forschungsgemeinschaft","keywords":"Biology; Zebrafish; Genetics; Danio; Gene; Population; Copy-number variation; Genetic variation; Evolutionary biology; Gene family; Vertebrate; Genome","score_opus":0.020701858322199576,"score_gpt":0.23239743607904367,"score_spread":0.2116955777568441,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386127424","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964006,0.00013221744,0.0022632198,0.000018407223,0.0000016196681,0.000006492187,0.0006503741,0.000032941414,0.0004941471],"genre_scores_gemma":[0.9973219,0.000057004145,0.0017555222,0.000013707139,0.0000018846571,0.000027990765,0.00040556386,0.000024868425,0.0003915753],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978465,0.000026657752,0.000012879664,0.00009706401,0.000060442242,0.00001836315],"domain_scores_gemma":[0.99969006,0.00009954392,0.00011813503,0.00004917594,0.000024697636,0.000018448998],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029109488,0.00012623626,0.00018353747,0.0006498574,0.00017806455,0.00020993895,0.00021918486,0.00020130049,0.0010204011],"category_scores_gemma":[0.0005675331,0.00013539601,0.00018083573,0.00032863222,0.00037270362,0.00012423377,0.00020095262,0.00021701076,0.00016414726],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023838345,0.000020159587,0.053016484,0.00003731616,0.00007243895,0.00009160504,0.00024190223,0.0012468197,0.93811136,0.0003815854,0.00009695798,0.0064449315],"study_design_scores_gemma":[0.000026837079,0.0003258553,0.9052724,0.0000120257955,0.00013047313,0.00065648474,0.00017659614,0.0075642187,0.08330749,0.00076732,0.0017123339,0.00004807296],"about_ca_topic_score_codex":0.002798645,"about_ca_topic_score_gemma":0.0035609673,"teacher_disagreement_score":0.002798645,"about_ca_system_score_codex":0.0004158405,"about_ca_system_score_gemma":0.000114640025,"threshold_uncertainty_score":0.00556463},"labels":[],"label_agreement":null},{"id":"W4386127485","doi":"10.20944/preprints202308.1707.v1","title":"How Does cGAS Avoid to Sense Self-DNA under Normal Physiological Conditions?","year":2023,"lang":"en","type":"preprint","venue":"Preprints.org","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; University of Saskatchewan","funders":"Priority Academic Program Development of Jiangsu Higher Education Institutions; National Natural Science Foundation of China","keywords":"Cell biology; DNA; Mitochondrial DNA; Biology; Sense (electronics); Innate immune system; Cytosol; Signal transducing adaptor protein; Chemistry; Genetics; Gene; Biochemistry; Signal transduction; Immune system; Enzyme","score_opus":0.11433421506949165,"score_gpt":0.3400419732745782,"score_spread":0.22570775820508654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386127485","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10026363,0.8108785,0.03765056,0.010046677,0.0034013083,0.00013604286,0.0006538435,0.00071874994,0.036250774],"genre_scores_gemma":[0.51360935,0.43202513,0.011898263,0.0054214178,0.001480476,0.00021332329,0.00085077254,0.00016366331,0.034337617],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996817,0.00005186893,0.000020451647,0.000088523804,0.00008158743,0.00007578511],"domain_scores_gemma":[0.99985504,0.000029449973,0.000039145096,0.000013328562,0.00004005643,0.000023022882],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040033582,0.00052736106,0.00066942925,0.00042180362,0.0003294635,0.0015993554,0.0003787137,0.0013592571,0.0014338613],"category_scores_gemma":[0.00041709264,0.0002024336,0.00050093594,0.0002414797,0.0008186459,0.0013799729,0.00046547037,0.0013874961,0.0012928193],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046155302,0.00007067676,0.0018604385,0.00586334,0.00015080457,0.0016035642,0.00087108393,0.0006899278,0.77908415,0.04327899,0.0073580714,0.15870738],"study_design_scores_gemma":[0.000029580038,0.0005384321,0.0059842058,0.0008907079,0.00017305587,0.0060853167,0.0010699071,0.0013901275,0.4341022,0.02211414,0.5274994,0.00012299666],"about_ca_topic_score_codex":0.000280692,"about_ca_topic_score_gemma":0.00022669921,"teacher_disagreement_score":0.0015993554,"about_ca_system_score_codex":0.00056751556,"about_ca_system_score_gemma":0.00043195236,"threshold_uncertainty_score":0.004796684},"labels":[],"label_agreement":null},{"id":"W4386195231","doi":"10.1101/2023.08.24.554709","title":"WITHDRAWN: Dynamic Regulation of MAVS Protein Function via Reversible Oxidation at Cys <sup>79</sup> in Response to Oxidant Stimuli","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine; Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Mitacs; Université de Montréal; University of Calgary","keywords":"Function (biology); Chemistry; Biophysics; Cell biology; Biology","score_opus":0.01265212808390254,"score_gpt":0.22485924270813906,"score_spread":0.21220711462423653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386195231","genre_codex":"editorial","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.048318025,0.012356133,0.024788218,0.1132777,0.5255715,0.0008721875,0.15908623,0.0072476175,0.10848235],"genre_scores_gemma":[0.16506392,0.012615722,0.017808512,0.018676138,0.03560623,0.00061929884,0.1628303,0.005262158,0.5815177],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984169,0.00013541312,0.00023312187,0.00012204937,0.00090191566,0.00019056161],"domain_scores_gemma":[0.99492997,0.0016768414,0.00029260074,0.0005391424,0.00187778,0.00068366725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016352588,0.0011285368,0.0010834462,0.0010645848,0.0012923799,0.002362146,0.0015138823,0.0026883064,0.12153085],"category_scores_gemma":[0.009560555,0.00046772402,0.00079400674,0.0011779862,0.00079298293,0.00146914,0.0009821482,0.0029189778,0.053088967],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027162929,0.000121900586,0.001313722,0.0011847862,0.00009566928,0.0017567576,0.00022376562,0.00023156813,0.08382958,0.008084307,0.844426,0.056015626],"study_design_scores_gemma":[0.0006378226,0.00028723018,0.011785797,0.0002953916,0.00008291809,0.0025803822,0.00026227636,0.0013226253,0.09758881,0.005218115,0.87977946,0.0001591577],"about_ca_topic_score_codex":0.00239434,"about_ca_topic_score_gemma":0.002492742,"teacher_disagreement_score":0.12153085,"about_ca_system_score_codex":0.0014466916,"about_ca_system_score_gemma":0.002113503,"threshold_uncertainty_score":0.40656126},"labels":[],"label_agreement":null},{"id":"W4386209832","doi":"10.1016/j.virusres.2023.199211","title":"Coronavirus 2′-O-methyltransferase: A promising therapeutic target","year":2023,"lang":"en","type":"review","venue":"Virus Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Infection and Immunity; National Institute of Allergy and Infectious Diseases; National Institutes of Health; University of Texas System","keywords":"Biology; Coronavirus; Methylation; RNA; Pandemic; Viral replication; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Virology; Coronavirus disease 2019 (COVID-19); Coronaviridae; Epigenetics; Computational biology; Genetics; Virus; DNA; Gene; Medicine","score_opus":0.48114171524566746,"score_gpt":0.5240330741256122,"score_spread":0.04289135887994472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386209832","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00014711705,0.9972932,0.00016162549,0.00063465926,0.0005538171,0.0000050715107,0.000024114841,0.000012139103,0.0011683088],"genre_scores_gemma":[0.00086855685,0.99690443,0.00024525003,0.00051909866,0.0003394613,0.000008541758,0.00005124229,0.0000024829762,0.0010608829],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99989533,0.000018757575,0.00001261709,0.000019947502,0.000036313333,0.000016975608],"domain_scores_gemma":[0.9998504,0.000057475132,0.000018654728,0.0000049963146,0.00004573092,0.00002259824],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044270858,0.0006457489,0.0008791466,0.0010201401,0.0002018446,0.0007784505,0.00063626276,0.0011331851,0.003333705],"category_scores_gemma":[0.00045447057,0.00019979979,0.00036956673,0.00087845785,0.00031445836,0.0012042623,0.00050724816,0.0022240207,0.0021959906],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011368629,0.00007189571,0.0001250703,0.007931959,0.00006155844,0.00019720393,0.000040179428,0.00037692994,0.0040918207,0.0043111537,0.053670634,0.9290078],"study_design_scores_gemma":[0.000018055587,0.000088713095,0.0002931926,0.0011032092,0.000039555867,0.0005688689,0.00002459518,0.00007233526,0.00049657864,0.0014353592,0.9958496,0.000009944632],"about_ca_topic_score_codex":0.0005573544,"about_ca_topic_score_gemma":0.001113908,"teacher_disagreement_score":0.003333705,"about_ca_system_score_codex":0.0004951561,"about_ca_system_score_gemma":0.00074323773,"threshold_uncertainty_score":0.011152387},"labels":[],"label_agreement":null},{"id":"W4386244163","doi":"10.1139/bcb-2023-0134","title":"LINE-1: an emerging initiator of cGAS-STING signalling and inflammation that is dysregulated in disease","year":2023,"lang":"en","type":"review","venue":"Biochemistry and Cell Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Stimulator of interferon genes; Sting; Biology; DNA damage; Cell biology; Interferon; Inflammation; Cancer research; Genetics; Immunology; Innate immune system; DNA; Immune system","score_opus":0.04977501779943996,"score_gpt":0.31221947936459005,"score_spread":0.2624444615651501,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386244163","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5640472,0.39107105,0.012873351,0.004785292,0.0014115556,0.00015630636,0.003913902,0.0020763318,0.019665066],"genre_scores_gemma":[0.8837158,0.08957827,0.004872389,0.0017320496,0.00093824475,0.00014418332,0.0053362236,0.0001433772,0.013539443],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998611,0.000021936856,0.000009495567,0.000038553146,0.00004022208,0.000028674429],"domain_scores_gemma":[0.9998586,0.0000105977515,0.000052411797,0.0000066152147,0.000021069272,0.000050595027],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015666056,0.0004725622,0.00034646114,0.00044919914,0.00024801743,0.0009571403,0.00036426645,0.0006204158,0.0023166311],"category_scores_gemma":[0.00016203638,0.00013724493,0.00018046507,0.00046089359,0.00029374255,0.00047197184,0.00034199122,0.0010247852,0.0011683544],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010056243,0.00014873996,0.009614495,0.0009714552,0.00008206998,0.0030364532,0.00018791165,0.00020213726,0.89029735,0.002896767,0.008659902,0.08289703],"study_design_scores_gemma":[0.00035906857,0.0020143264,0.13024954,0.00042827651,0.0004640572,0.02925359,0.0006991589,0.0021260013,0.34306532,0.005379463,0.4858402,0.00012098021],"about_ca_topic_score_codex":0.00019185834,"about_ca_topic_score_gemma":0.00024306779,"teacher_disagreement_score":0.0023166311,"about_ca_system_score_codex":0.00037183464,"about_ca_system_score_gemma":0.000220995,"threshold_uncertainty_score":0.0077498555},"labels":[],"label_agreement":null},{"id":"W4386366374","doi":"10.1016/j.jbc.2023.105213","title":"Porcine IKKε is involved in the STING-induced type I IFN antiviral response of the cytosolic DNA signaling pathway","year":2023,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; University of Saskatchewan","funders":"Higher Education Discipline Innovation Project; Priority Academic Program Development of Jiangsu Higher Education Institutions; National Natural Science Foundation of China","keywords":"IκB kinase; TANK-binding kinase 1; Sting; Cell biology; Innate immune system; Interferon; Kinase; Biology; Signal transduction; Stimulator of interferon genes; NF-κB; Protein kinase A; Immune system; Virology; MAP kinase kinase kinase; Genetics","score_opus":0.049905881206274816,"score_gpt":0.2774996507383429,"score_spread":0.22759376953206806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386366374","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921646,0.0024749741,0.003016089,0.00015873865,0.00006159167,0.000016477574,0.00025276124,0.000053175914,0.0018014295],"genre_scores_gemma":[0.99554473,0.0009525293,0.0010493819,0.00006739063,0.000018574607,0.000012029713,0.00068513793,0.00001044735,0.0016598051],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987817,0.000019023406,0.000013362012,0.000027342441,0.000020963398,0.000041101644],"domain_scores_gemma":[0.9999219,0.000007586308,0.00003039473,0.000008872271,0.0000074289765,0.000023873346],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012894403,0.0003150369,0.00017116893,0.00015736227,0.00019386312,0.00024565484,0.00014925262,0.00029893927,0.0014591354],"category_scores_gemma":[0.00011579086,0.0001154994,0.00054420443,0.00010767251,0.0002059265,0.00025508204,0.00021017247,0.0003620633,0.0005292552],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024833909,0.000024449117,0.0008619819,0.00007526931,0.000007651213,0.00019842929,0.000021695987,0.000039521292,0.9974304,0.00011789802,0.00004798358,0.0009264483],"study_design_scores_gemma":[0.000075144155,0.0007022964,0.07678978,0.000048373768,0.00012345737,0.0042564496,0.00021761357,0.0024547935,0.9049693,0.0006562136,0.0096827345,0.000023824428],"about_ca_topic_score_codex":0.000270636,"about_ca_topic_score_gemma":0.00015715233,"teacher_disagreement_score":0.0014591354,"about_ca_system_score_codex":0.00020079709,"about_ca_system_score_gemma":0.000209201,"threshold_uncertainty_score":0.004881263},"labels":[],"label_agreement":null},{"id":"W4386738535","doi":"10.1371/journal.ppat.1011619","title":"The emerging roles of MARCH8 in viral infections: A double-edged Sword","year":2023,"lang":"en","type":"review","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"SWORD; Virology; Biology; Computer science; World Wide Web","score_opus":0.06325472712502024,"score_gpt":0.3331335901677206,"score_spread":0.26987886304270037,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386738535","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016732795,0.9978631,0.00015471425,0.0006742763,0.0004212052,0.0000020503091,0.0000132685345,0.000008786735,0.0006953837],"genre_scores_gemma":[0.00078661647,0.9974111,0.00018297248,0.00044079803,0.0004648293,0.0000034210698,0.000024144158,0.0000020741347,0.00068406685],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998878,0.000019206647,0.000016881539,0.000020689571,0.000039708953,0.000015650587],"domain_scores_gemma":[0.99979466,0.000079585996,0.000022436125,0.0000062771815,0.00006080692,0.00003633829],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004244128,0.0005786085,0.0007638289,0.0010976907,0.00022972235,0.0007945055,0.0005746563,0.0009895868,0.0022954207],"category_scores_gemma":[0.00047342628,0.0001934307,0.00033326985,0.0011328863,0.0004463879,0.0017246831,0.00066767994,0.0020143555,0.0012719604],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011031356,0.00003758778,0.0001707607,0.010490222,0.00006579507,0.00026588494,0.00009856385,0.0002854728,0.004282431,0.005748022,0.049712688,0.9287324],"study_design_scores_gemma":[0.000011128067,0.00008738623,0.00045888967,0.0012313655,0.000049345635,0.00100966,0.000054012613,0.00006622025,0.0005598482,0.0022187503,0.99423945,0.000013893817],"about_ca_topic_score_codex":0.0004791017,"about_ca_topic_score_gemma":0.00087932096,"teacher_disagreement_score":0.0022954207,"about_ca_system_score_codex":0.00045989954,"about_ca_system_score_gemma":0.00081161957,"threshold_uncertainty_score":0.0076789856},"labels":[],"label_agreement":null},{"id":"W4386784082","doi":"10.1158/1557-3265.aacrahns23-po-085","title":"Abstract PO-085: Inhibition of ATR as a therapeutic strategy to enhance immunotherapy in head and neck cancer","year":2023,"lang":"en","type":"article","venue":"Clinical Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Head and neck squamous-cell carcinoma; Cancer research; Immunotherapy; In vivo; Tumor microenvironment; Medicine; Cancer; Head and neck cancer; Immune system; Bone marrow; Cancer immunotherapy; Cancer cell; Immunology; Biology; Internal medicine","score_opus":0.17252176993906557,"score_gpt":0.5376926346770885,"score_spread":0.36517086473802296,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386784082","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9802951,0.008731592,0.00285253,0.0006598631,0.00013042998,0.00022068503,0.00089150283,0.00021543393,0.0060027903],"genre_scores_gemma":[0.9869141,0.0033254358,0.0033984622,0.00023192423,0.000047322577,0.00011691983,0.0011135815,0.000020989017,0.004831211],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998987,0.000012673704,0.000008931661,0.000021364116,0.000030340043,0.000027990704],"domain_scores_gemma":[0.99995863,0.0000045597403,0.000009339211,0.0000055885544,0.0000066875646,0.000015209545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020316606,0.0003486207,0.00030715507,0.00029230549,0.000141684,0.00035913545,0.00030315746,0.00028841663,0.0031523963],"category_scores_gemma":[0.00006206393,0.000090912086,0.00022470113,0.00020958853,0.00024783684,0.00023175955,0.0001739643,0.0009677187,0.00070080796],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00079875294,0.0005673759,0.00073148735,0.00027371326,0.000031356118,0.00010887707,0.000019720459,0.0004354211,0.97043085,0.00036968564,0.0010262774,0.0252064],"study_design_scores_gemma":[0.00035799813,0.006036934,0.0072608725,0.00003435656,0.00011562169,0.00078584964,0.00004876509,0.0016819729,0.96683073,0.00013416035,0.016702212,0.00001061448],"about_ca_topic_score_codex":0.0003290002,"about_ca_topic_score_gemma":0.0006856171,"teacher_disagreement_score":0.0031523963,"about_ca_system_score_codex":0.00030450063,"about_ca_system_score_gemma":0.00039133828,"threshold_uncertainty_score":0.01054585},"labels":[],"label_agreement":null},{"id":"W4386950576","doi":"10.1182/blood.2023019782","title":"Inhibition of PLK4 remodels histone methylation and activates the immune response via the cGAS-STING pathway in TP53-mutated AML","year":2023,"lang":"en","type":"article","venue":"Blood","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"Cancer Research UK","keywords":"Biology; Cancer research; Myeloid leukemia; Signal transduction; Cell biology","score_opus":0.016561899801830492,"score_gpt":0.25587915366585706,"score_spread":0.23931725386402658,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386950576","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965905,0.0013202474,0.0011157467,0.00007382414,0.000021166004,0.000018820945,0.00019216926,0.0000724889,0.00059502426],"genre_scores_gemma":[0.99794906,0.0005527143,0.00063168624,0.00002640491,0.0000046383066,0.000021294702,0.00022224829,0.000006144102,0.00058580743],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992967,0.000010971602,0.000007826542,0.000012575022,0.000015276613,0.000023668124],"domain_scores_gemma":[0.99997234,0.0000033351862,0.000009128294,0.0000034074178,0.0000019073912,0.000009881369],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010848659,0.000304769,0.00023397336,0.00021628385,0.00009242509,0.0001873144,0.00014051294,0.00015234358,0.0011405803],"category_scores_gemma":[0.00007548639,0.000112057656,0.00025575465,0.00013900756,0.00016875555,0.0001450375,0.00014197394,0.00045557594,0.00021717345],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006144586,0.00005572457,0.00039399994,0.00005361975,0.000012858851,0.00006183809,0.0000090432595,0.00031071657,0.99559647,0.00009936982,0.000056058823,0.002735927],"study_design_scores_gemma":[0.00010703209,0.0009892168,0.0046441196,0.0000053834488,0.000038460952,0.00024044355,0.000016449067,0.0026750076,0.98909444,0.00009442415,0.002089564,0.0000054019733],"about_ca_topic_score_codex":0.00027453658,"about_ca_topic_score_gemma":0.00047294755,"teacher_disagreement_score":0.0011405803,"about_ca_system_score_codex":0.00025721407,"about_ca_system_score_gemma":0.0001717285,"threshold_uncertainty_score":0.003815651},"labels":[],"label_agreement":null},{"id":"W4387107371","doi":"10.1016/j.ymthe.2023.09.017","title":"Pevonedistat, a first-in-class NEDD8-activating enzyme inhibitor, sensitizes cancer cells to VSVΔ51 oncolytic virotherapy","year":2023,"lang":"en","type":"article","venue":"Molecular Therapy","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"Canadian Institutes of Health Research; University of Toronto; Canadian Cancer Society; Lotte and John Hecht Memorial Foundation; Ottawa Hospital Research Institute; Terry Fox Research Institute; University of Ottawa","keywords":"Oncolytic virus; Cancer research; Neddylation; Biology; Virotherapy; Cancer; Cancer cell; Immunology; Virology; Immune system","score_opus":0.015125035158217925,"score_gpt":0.27413123938998507,"score_spread":0.2590062042317671,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387107371","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9848509,0.0061448975,0.0026842242,0.00030493617,0.00015676273,0.00006774249,0.00036815504,0.0002069805,0.00521549],"genre_scores_gemma":[0.9923608,0.0024588055,0.0014818951,0.00010508199,0.000015353418,0.000026917607,0.0005069959,0.000017335808,0.0030269013],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999299,0.000009722028,0.0000044696576,0.000009738452,0.000016007938,0.000030242078],"domain_scores_gemma":[0.9999747,0.00000687392,0.000004578014,0.000004144016,0.000003989406,0.000005746948],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011477052,0.00025233993,0.00029634984,0.00017289899,0.00011315699,0.00034729944,0.00020199092,0.00026654548,0.0011312632],"category_scores_gemma":[0.00008895962,0.00012559594,0.00018978852,0.00009066206,0.00015194608,0.00017497975,0.000115157716,0.00067130727,0.00029362945],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011402057,0.00021117831,0.00051353953,0.00008157364,0.000022633654,0.000113004986,0.000021794158,0.0010511238,0.9635184,0.00060304604,0.0008298528,0.03189356],"study_design_scores_gemma":[0.00022110106,0.0018206339,0.0025228183,0.000012334966,0.000026223279,0.0006417512,0.000025154692,0.0021720673,0.98342806,0.00018148412,0.008939158,0.000009098235],"about_ca_topic_score_codex":0.00041270722,"about_ca_topic_score_gemma":0.0009627045,"teacher_disagreement_score":0.0011312632,"about_ca_system_score_codex":0.00029348055,"about_ca_system_score_gemma":0.00023888424,"threshold_uncertainty_score":0.0037844777},"labels":[],"label_agreement":null},{"id":"W4387186227","doi":"10.3390/ijms241914738","title":"How Does cGAS Avoid Sensing Self-DNA under Normal Physiological Conditions?","year":2023,"lang":"en","type":"review","venue":"International Journal of Molecular Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; University of Saskatchewan","funders":"Priority Academic Program Development of Jiangsu Higher Education Institutions; National Natural Science Foundation of China","keywords":"DNA; Cell biology; Biology; Mitochondrial DNA; Innate immune system; Signal transducing adaptor protein; Cytosol; Genetics; Gene; Biochemistry; Signal transduction; Immune system","score_opus":0.052344254575244865,"score_gpt":0.34936107891154533,"score_spread":0.29701682433630044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387186227","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00038693266,0.9972691,0.00028795874,0.00042195804,0.00025771576,0.000006189063,0.000019898678,0.000011729085,0.0013385253],"genre_scores_gemma":[0.0021231205,0.9962304,0.00024132937,0.00025586784,0.00014798118,0.000010775993,0.000029559425,0.0000019494992,0.0009589492],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999044,0.000014569103,0.000012388634,0.000022260678,0.000031544983,0.000014840225],"domain_scores_gemma":[0.9999249,0.000025690992,0.000015379876,0.000002784634,0.000021725184,0.000009566599],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025004867,0.00057173485,0.0008414544,0.0009940644,0.00021547533,0.0009443248,0.0005523689,0.0010260112,0.0015946476],"category_scores_gemma":[0.00031264653,0.00020216971,0.00032081353,0.0006525662,0.00038059012,0.0012279301,0.00038236353,0.0012012549,0.0014813027],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012850182,0.00006262166,0.00028967005,0.020821592,0.000087536166,0.000397815,0.00014902577,0.00037798568,0.019712761,0.010288969,0.018650977,0.9290325],"study_design_scores_gemma":[0.000010457654,0.0001410026,0.0007234872,0.0016304889,0.000074213494,0.001594138,0.00009762672,0.00011255353,0.0039641615,0.002637365,0.9889903,0.000024119157],"about_ca_topic_score_codex":0.00047360777,"about_ca_topic_score_gemma":0.0006922718,"teacher_disagreement_score":0.0015946476,"about_ca_system_score_codex":0.0004056755,"about_ca_system_score_gemma":0.0005665176,"threshold_uncertainty_score":0.005334556},"labels":[],"label_agreement":null},{"id":"W4387244444","doi":"10.1101/2023.09.30.560301","title":"Cellular rejuvenation protects neurons from inflammation mediated cell death","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université Laval; Montreal Neurological Institute and Hospital","funders":"Canadian Institutes of Health Research; National Institute on Aging; National Institutes of Health; Glenn Foundation for Medical Research","keywords":"Biology; Neuroprotection; Transcriptome; Neuroscience; Microglia; Cell biology; Experimental autoimmune encephalomyelitis; Inflammation; Central nervous system; Immunology; Gene expression; Genetics; Gene","score_opus":0.01823587106310461,"score_gpt":0.21136653933305202,"score_spread":0.1931306682699474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387244444","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99242,0.003788151,0.00210319,0.00007784209,0.0000791583,0.00002830382,0.00032787683,0.0001171266,0.0010583802],"genre_scores_gemma":[0.9938799,0.00190665,0.001061976,0.00007600715,0.000020048861,0.000046801553,0.0005051855,0.00002168593,0.0024817744],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990773,0.0000124280805,0.000010356615,0.000025714304,0.000018394454,0.000025351155],"domain_scores_gemma":[0.9999405,0.000005623733,0.000013376653,0.000013483227,0.0000105885065,0.00001638931],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011977662,0.00029362945,0.00033930535,0.0001634019,0.00011677795,0.00029912713,0.00019407524,0.00022582013,0.0012554575],"category_scores_gemma":[0.00006135588,0.000084220934,0.00026794302,0.00009000086,0.00016629038,0.00017342619,0.00018533616,0.0005570342,0.00034156945],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015556601,0.00003737881,0.00007313419,0.000054554046,0.000009256475,0.000025602347,0.000013702236,0.000045181456,0.99760145,0.000056008408,0.000047333597,0.0018808506],"study_design_scores_gemma":[0.000032076798,0.001459882,0.0054662186,0.000031022933,0.000046721834,0.0001985658,0.0000590759,0.00053361093,0.9871414,0.00013509307,0.004889279,0.000007050108],"about_ca_topic_score_codex":0.00024611174,"about_ca_topic_score_gemma":0.00038602625,"teacher_disagreement_score":0.0012554575,"about_ca_system_score_codex":0.00012961488,"about_ca_system_score_gemma":0.00014946511,"threshold_uncertainty_score":0.004199922},"labels":[],"label_agreement":null},{"id":"W4387603358","doi":"10.3389/fimmu.2023.1258691","title":"Immunotherapy with STING and TLR9 agonists promotes synergistic therapeutic efficacy with suppressed cancer-associated fibroblasts in colon carcinoma","year":2023,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Leids Universitair Medisch Centrum; Ferdowsi University of Mashhad; Universiteit Leiden","keywords":"Tumor microenvironment; Cancer research; Immune system; TLR9; Immunotherapy; Medicine; Innate immune system; Immunology; Downregulation and upregulation; Biology; DNA methylation","score_opus":0.009879294689158186,"score_gpt":0.23498943493729452,"score_spread":0.22511014024813633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387603358","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99777883,0.00095960515,0.00048491397,0.000054221902,0.000029589732,0.000039708426,0.00005617217,0.0000342341,0.000562774],"genre_scores_gemma":[0.99718153,0.00075285556,0.0010985719,0.00003635007,0.000015124204,0.00004370661,0.00009146933,0.000004544437,0.00077592564],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999126,0.000021627015,0.000008000172,0.0000121423045,0.000023052859,0.000022664484],"domain_scores_gemma":[0.99994266,0.0000092832615,0.000012859519,0.0000076713695,0.0000043733585,0.000023132572],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013279098,0.0003348936,0.00037987676,0.00023367061,0.00008621776,0.00013151948,0.00010066282,0.00018360591,0.0006861338],"category_scores_gemma":[0.00007849573,0.000113040616,0.0002338884,0.00012869197,0.00015290373,0.0001302383,0.00014257427,0.0005086726,0.00016851563],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007764273,0.00044337971,0.00027315808,0.00006926081,0.000009195096,0.00007799926,0.00002247613,0.0002100931,0.9930507,0.000035706817,0.000068466754,0.00496304],"study_design_scores_gemma":[0.00022517932,0.009265911,0.0065814923,0.0000133830845,0.0000577044,0.00046199566,0.00004486328,0.0026042697,0.9780698,0.000052952182,0.002613969,0.0000086062855],"about_ca_topic_score_codex":0.0002910305,"about_ca_topic_score_gemma":0.00076802575,"teacher_disagreement_score":0.0006861338,"about_ca_system_score_codex":0.00012220722,"about_ca_system_score_gemma":0.00023269438,"threshold_uncertainty_score":0.0022953749},"labels":[],"label_agreement":null},{"id":"W4387747110","doi":"10.1016/j.antiviral.2023.105736","title":"ASK1 inhibitors are potential pan-antiviral drugs, which dampen replication of diverse viruses including SARS-CoV2","year":2023,"lang":"en","type":"article","venue":"Antiviral Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Canada Foundation for Innovation","keywords":"Biology; Virology; ASK1; Virus; Viral replication; Protein kinase R; Kinase; Vaccinia; Activator (genetics); Protein kinase A; Interferon; Cell biology; Mitogen-activated protein kinase kinase; Receptor; Biochemistry","score_opus":0.11998237690830317,"score_gpt":0.41046820339299284,"score_spread":0.2904858264846897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387747110","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.880336,0.09893787,0.0058978684,0.0008168113,0.00032997533,0.00031036767,0.0012183692,0.00036044573,0.011792301],"genre_scores_gemma":[0.9688742,0.020626519,0.0028262932,0.00029907838,0.00006836744,0.0001326273,0.0012635011,0.000019135548,0.005890197],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999205,0.000019842133,0.000008685979,0.000015202295,0.000017977301,0.000017719074],"domain_scores_gemma":[0.99995303,0.000007816312,0.000014730327,0.000004113482,0.000008537325,0.000011666792],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019542764,0.00041954013,0.0004031682,0.00036248346,0.0001637071,0.0002483158,0.00015174452,0.0002236088,0.0020628592],"category_scores_gemma":[0.0000863191,0.0000717451,0.00026616707,0.00017453817,0.00014779378,0.00024093123,0.00016384592,0.00068889686,0.00039132766],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015588562,0.0007765067,0.0011897848,0.0010044791,0.00009708408,0.00023293192,0.000053257125,0.0005516043,0.890115,0.0008684044,0.0015383743,0.10201357],"study_design_scores_gemma":[0.00041438805,0.00986051,0.010437758,0.00009042211,0.00015727435,0.001442066,0.00007750479,0.0016030262,0.9251294,0.0005517173,0.050207987,0.000027999416],"about_ca_topic_score_codex":0.0001185691,"about_ca_topic_score_gemma":0.00063407107,"teacher_disagreement_score":0.0020628592,"about_ca_system_score_codex":0.00016770118,"about_ca_system_score_gemma":0.00015975814,"threshold_uncertainty_score":0.006900966},"labels":[],"label_agreement":null},{"id":"W4387811279","doi":"10.1016/j.annonc.2023.09.2168","title":"1029P Dazostinag (TAK-676) alone and in combination with pembrolizumab (pembro) in patients (pts) with advanced or metastatic solid tumors: Preliminary safety, PK/PD, and anti-tumor activity in a phase I dose escalation study supporting a recommended dose for expansion (RDE)","year":2023,"lang":"en","type":"article","venue":"Annals of Oncology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"Regeneron Pharmaceuticals; EMD Serono; Takeda Pharmaceuticals U.S.A.; Genentech; Amgen","keywords":"Medicine; Sting; Cytokine; Adverse effect; Pharmacology; Cytokine release syndrome; Internal medicine; Oncology; Cancer; Immunotherapy","score_opus":0.046951383831123114,"score_gpt":0.37843417556608816,"score_spread":0.33148279173496503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387811279","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99478006,0.0021272576,0.0004060109,0.0002784889,0.00007968301,0.00020174948,0.00019395693,0.000081998034,0.0018509082],"genre_scores_gemma":[0.99638236,0.0008509116,0.0008069464,0.0001852918,0.000048758397,0.00011453533,0.00033771235,0.000010210145,0.0012632117],"study_design_codex":"design_other","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.99980575,0.00007585959,0.000010587888,0.000029053077,0.000022309294,0.000056494402],"domain_scores_gemma":[0.999803,0.000043320313,0.000031323256,0.000017856477,0.000009774944,0.0000947389],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005544616,0.00042050146,0.00089228305,0.00026125606,0.00021641568,0.000495057,0.00039507376,0.00048673648,0.0025470548],"category_scores_gemma":[0.0004868154,0.0002604175,0.00047348748,0.00030700283,0.0003249113,0.0004367928,0.00020226593,0.0017234269,0.0006895994],"study_design_candidate":"nonrandomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.33745718,0.025264904,0.009871675,0.00049240707,0.001092505,0.0004926415,0.00026297898,0.0035838156,0.1576576,0.00050127733,0.0041825594,0.45914054],"study_design_scores_gemma":[0.19615252,0.6788665,0.06283061,0.00010234907,0.0009999463,0.0016536635,0.0001789163,0.0070552942,0.04107009,0.000470729,0.010555591,0.000063777545],"about_ca_topic_score_codex":0.0005378023,"about_ca_topic_score_gemma":0.0017410798,"teacher_disagreement_score":0.0025470548,"about_ca_system_score_codex":0.0003897296,"about_ca_system_score_gemma":0.0004227291,"threshold_uncertainty_score":0.008520722},"labels":[],"label_agreement":null},{"id":"W4387930871","doi":"10.1002/jez.b.23227","title":"Suppressors of cGAS‐STING are downregulated during fin‐limb regeneration and aging in aquatic vertebrates","year":2023,"lang":"en","type":"article","venue":"Journal of Experimental Zoology Part B Molecular and Developmental Evolution","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; California State University, Chico; College of Engineering, Michigan State University; National Institutes of Health; Dalhousie University; University of Waterloo; Michigan State University; Beatrice Hunter Cancer Research Institute; Cancer Research Institute","keywords":"Blastema; Axolotl; Biology; Zebrafish; Innate immune system; Cell biology; Regeneration (biology); Danio; Gene expression; Wound healing; Gene; Anatomy; Immunology; Immune system; Genetics","score_opus":0.01046414845317266,"score_gpt":0.24036564447286912,"score_spread":0.22990149601969645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387930871","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990689,0.00033639366,0.00017920646,0.00000794532,0.0000031338473,0.000003638441,0.00020752203,0.000022173543,0.00017116789],"genre_scores_gemma":[0.9979818,0.00019948947,0.00022325914,0.0000137981015,0.0000032045023,0.000017817321,0.0004295607,0.0000062987456,0.0011246754],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993896,0.0000047254375,0.000007789354,0.000018594088,0.000014716332,0.000015352394],"domain_scores_gemma":[0.99981624,0.0000090130825,0.00010302018,0.000009261016,0.000012550343,0.000050049737],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000077600096,0.00021982004,0.00023751658,0.0004400304,0.00014619927,0.00017516638,0.00008770408,0.0001872062,0.0009291291],"category_scores_gemma":[0.000098982775,0.00012717709,0.00021361161,0.00018117158,0.0002149275,0.00012737005,0.00013989875,0.00021533095,0.00017650834],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019779161,0.000008528214,0.003003244,0.00001894882,0.00000530731,0.00008424393,0.00003982264,0.000013014877,0.9959608,0.000015640675,0.00001486676,0.0006377945],"study_design_scores_gemma":[0.000021636684,0.00062238285,0.641685,0.000009275388,0.000057683523,0.0010347809,0.00024569916,0.0004178748,0.35438713,0.0000679354,0.0014381766,0.0000124610015],"about_ca_topic_score_codex":0.00065637846,"about_ca_topic_score_gemma":0.0007385679,"teacher_disagreement_score":0.0009291291,"about_ca_system_score_codex":0.0001354128,"about_ca_system_score_gemma":0.00009560991,"threshold_uncertainty_score":0.0031082034},"labels":[],"label_agreement":null},{"id":"W4388042466","doi":"10.1136/jitc-2023-sitc2023.1118","title":"1118 The iodinated fluorescein derivative PV-10 enhances the antiviral activity of CD8+ T-Cells by inducing STING dimerization: implications for enhanced vaccine applications","year":2023,"lang":"en","type":"article","venue":"Regular and Young Investigator Award Abstracts","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary; Alberta Bible College","funders":"Alberta Children's Hospital Foundation; Children's Hospital Foundation","keywords":"Cytotoxic T cell; Sting; Adjuvant; CD8; Cytotoxicity; Chemistry; Medicine; Immunology; Immune system; Biology; Molecular biology; Cancer research; Biochemistry","score_opus":0.016271690769014174,"score_gpt":0.2621915126719617,"score_spread":0.24591982190294756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388042466","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9852282,0.0037676508,0.0066760127,0.0003136206,0.00006584021,0.000044403805,0.000234169,0.00010718032,0.00356289],"genre_scores_gemma":[0.9900149,0.0014486682,0.00509816,0.00012967449,0.000015759455,0.000024779321,0.0002646457,0.000013949619,0.0029893618],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993825,0.000015598474,0.000003979169,0.000009129392,0.000012508055,0.000020625444],"domain_scores_gemma":[0.99997246,0.000005831104,0.0000075737303,0.000002241587,0.0000033124684,0.000008498759],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013001559,0.00018974581,0.000105922234,0.000087049084,0.000053241198,0.00015985736,0.000152931,0.00026777983,0.0021581354],"category_scores_gemma":[0.00007141329,0.00009354979,0.00011467141,0.000079421014,0.00017175634,0.00013088969,0.00007999634,0.00033010897,0.00046843945],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009585509,0.000015898046,0.00006804953,0.000025481486,9.46502e-7,0.00001923062,0.000003236609,0.00005198768,0.9984831,0.00005918496,0.000046692654,0.0011303714],"study_design_scores_gemma":[0.000019443258,0.00043619165,0.0010776914,0.0000049977148,0.000004341009,0.00013515758,0.000007859368,0.00075877656,0.9951015,0.00003362417,0.002417173,0.000003201748],"about_ca_topic_score_codex":0.0004064762,"about_ca_topic_score_gemma":0.00048516388,"teacher_disagreement_score":0.0021581354,"about_ca_system_score_codex":0.0002690997,"about_ca_system_score_gemma":0.00014780056,"threshold_uncertainty_score":0.007219672},"labels":[],"label_agreement":null},{"id":"W4388089593","doi":"10.1136/jitc-2023-sitc2023.0865","title":"865 Combining radiotherapy with novel TLR-based immunotherapy for improved tumor control in lung cancer","year":2023,"lang":"en","type":"article","venue":"Regular and Young Investigator Award Abstracts","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Sting; Cancer research; Cancer immunotherapy; Immunotherapy; Immune system; Prostate cancer; Cancer; Chemistry; Pharmacology; Medicine; Immunology; Internal medicine","score_opus":0.011441972537060655,"score_gpt":0.2562417504485607,"score_spread":0.24479977791150004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388089593","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9660503,0.015033537,0.009005269,0.00040408975,0.00017348734,0.000262514,0.0005604979,0.0004230126,0.008087389],"genre_scores_gemma":[0.98707086,0.0034683608,0.004846886,0.0001877946,0.00003289757,0.00013941702,0.0004993949,0.000030794636,0.003723633],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993277,0.000009458377,0.0000048490797,0.000015380963,0.000015208137,0.000022210246],"domain_scores_gemma":[0.9999845,0.0000020368552,0.0000036480255,0.0000022324405,0.000002355623,0.0000051637994],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011632073,0.0002107074,0.00031765076,0.0002006017,0.00009999103,0.000248496,0.00030997122,0.00034099727,0.0023651482],"category_scores_gemma":[0.00004653826,0.00011948732,0.00039185234,0.00016941366,0.00012484298,0.0002302965,0.00020361888,0.00044816927,0.0005824177],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010630022,0.00051778933,0.00032445564,0.00026512227,0.00003194405,0.000082056744,0.00002288019,0.00066093385,0.9681189,0.0002702611,0.00049215317,0.02815051],"study_design_scores_gemma":[0.00043609494,0.007209861,0.005445679,0.0000315278,0.00014521457,0.0007005452,0.00003567835,0.0044243364,0.96610516,0.00019960741,0.015242017,0.000024241352],"about_ca_topic_score_codex":0.00043288973,"about_ca_topic_score_gemma":0.00071607163,"teacher_disagreement_score":0.0023651482,"about_ca_system_score_codex":0.00019150834,"about_ca_system_score_gemma":0.00022710311,"threshold_uncertainty_score":0.007912159},"labels":[],"label_agreement":null},{"id":"W4388906326","doi":"10.26508/lsa.202302211","title":"Megakaryocytes possess a STING pathway that is transferred to platelets to potentiate activation","year":2023,"lang":"en","type":"article","venue":"Life Science Alliance","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Heart Institute; Université du Québec à Trois-Rivières","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Sciences and Engineering Research Council of Canada; Fonds de recherche du Québec; Canada Foundation for Innovation; Canada Research Chairs; Government of Canada","keywords":"Sting; Thrombopoiesis; Platelet; Cell biology; Megakaryocyte; Thrombopoietin; Platelet activation; Signal transducing adaptor protein; Stimulator of interferon genes; Signal transduction; Biology; Chemistry; Immunology; Innate immune system; Immune system; Haematopoiesis","score_opus":0.04630722724906514,"score_gpt":0.29802531989743913,"score_spread":0.25171809264837397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388906326","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9854739,0.0028307643,0.0076208245,0.00022167449,0.000042707834,0.00003528745,0.00019846209,0.00011397753,0.003462244],"genre_scores_gemma":[0.9927281,0.00093002326,0.0037139375,0.00008423662,0.000015387677,0.000029808687,0.00026418545,0.00001393523,0.0022204858],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99994254,0.000011438026,0.000005160796,0.000009186262,0.00001754715,0.000014178709],"domain_scores_gemma":[0.99995434,0.000009398641,0.000011662692,0.000008504985,0.0000045038055,0.000011501671],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000076190925,0.0001740363,0.00012082325,0.0001193286,0.00008827362,0.00018344389,0.00007812138,0.0002053426,0.00091181404],"category_scores_gemma":[0.00009260092,0.00007747506,0.00012331706,0.00009014618,0.000107276916,0.00014334418,0.00021120661,0.00052417675,0.0002714847],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028778846,0.000004388328,0.00008569085,0.000010127386,0.0000016449293,0.000046236495,0.000008271757,0.000010806518,0.9984837,0.00017043628,0.000014997599,0.0011348926],"study_design_scores_gemma":[0.000019641468,0.00029351134,0.006697772,0.0000072333037,0.000016688362,0.0005802957,0.000020588144,0.00048773587,0.98783165,0.00015561133,0.0038867043,0.0000024757696],"about_ca_topic_score_codex":0.00009506063,"about_ca_topic_score_gemma":0.00018942027,"teacher_disagreement_score":0.00091181404,"about_ca_system_score_codex":0.00012651582,"about_ca_system_score_gemma":0.0000904655,"threshold_uncertainty_score":0.0030502677},"labels":[],"label_agreement":null},{"id":"W4388938516","doi":"10.12688/wellcomeopenres.20385.1","title":"Phenotypes associated with genetic determinants of type I interferon regulation in the UK Biobank: a protocol","year":2023,"lang":"en","type":"preprint","venue":"Wellcome Open Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Thrombosis and Atherosclerosis Research Institute; McMaster University; Population Health Research Institute","funders":"Health Data Research UK; Medical Research Council; National Institutes of Health; National Institute for Health and Care Research; University of Edinburgh; Wellcome; Canadian Institutes of Health Research; Guarantors of Brain; Wellcome Trust; Alzheimer's Society; Ministère de la Santé; Ministère de la Santé et des Services sociaux; Scottish Government","keywords":"Biobank; Interferon; Genetics; Interferon type I; Biology; Minor allele frequency; IRF5; Allele; Phenotype; Genome-wide association study; Single-nucleotide polymorphism; Population; Genetic association; Disease; Human genetics; Gene; Bioinformatics; Immunology; Medicine; Genotype; Allele frequency; Innate immune system; Interferon regulatory factors; Immune system; Internal medicine","score_opus":0.18857570173939628,"score_gpt":0.42619133895080263,"score_spread":0.23761563721140636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388938516","genre_codex":"protocol","genre_gemma":"protocol","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"protocol","genre_consensus":"protocol","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.01406538,0.0014102091,0.021069841,0.0035874234,0.0007947314,0.71234816,0.22304049,0.0015378122,0.022145819],"genre_scores_gemma":[0.008318954,0.0013092877,0.029492648,0.0015033429,0.00022633672,0.8802236,0.069680184,0.0002247037,0.009021007],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.98334,0.0069176503,0.0052399095,0.0016799066,0.0017492762,0.001073271],"domain_scores_gemma":[0.9387984,0.021948094,0.005390885,0.012010001,0.017097218,0.0047553773],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.033133604,0.0012738003,0.0022247096,0.0065342737,0.0033379223,0.003999655,0.0028569675,0.003075516,0.17497675],"category_scores_gemma":[0.07474913,0.0018283719,0.0019988434,0.0054432,0.0016043717,0.0025305601,0.005172006,0.0021293072,0.036870472],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.019362668,0.0015162771,0.01469831,0.045618866,0.00043541368,0.003428967,0.007877615,0.001280835,0.009020075,0.013259503,0.7131339,0.17036746],"study_design_scores_gemma":[0.0053771576,0.0010833351,0.0391517,0.011488913,0.00024797962,0.001065747,0.0021219312,0.0005441541,0.0024118924,0.0043740547,0.931869,0.0002642107],"about_ca_topic_score_codex":0.004473707,"about_ca_topic_score_gemma":0.007951851,"teacher_disagreement_score":0.17497675,"about_ca_system_score_codex":0.0038944227,"about_ca_system_score_gemma":0.015538614,"threshold_uncertainty_score":0.5853555},"labels":[],"label_agreement":null},{"id":"W4389227813","doi":"10.1158/2326-6074.tumimm23-b035","title":"Abstract B035: The contribution of inflammasomes and cGAS-STING in RT-induced cell fate","year":2023,"lang":"en","type":"article","venue":"Cancer Immunology Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto","funders":"","keywords":"Inflammasome; AIM2; Pyrin domain; Biology; Innate immune system; Cytokine; Cancer research; Pyroptosis; Cell biology; Immunology; Immune system; Inflammation","score_opus":0.06907600309833052,"score_gpt":0.3741322705198751,"score_spread":0.30505626742154457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389227813","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.981368,0.0072731567,0.004184072,0.00030247663,0.00012526855,0.000055386714,0.0011966447,0.00014539821,0.0053495346],"genre_scores_gemma":[0.992934,0.0010911612,0.0013652593,0.000081945676,0.000015756497,0.00004056609,0.00066156086,0.000020126248,0.0037896251],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999861,0.000026569935,0.000017950637,0.000025757769,0.00003606818,0.000032579323],"domain_scores_gemma":[0.99986136,0.000025601776,0.000039831324,0.00002005968,0.000018446988,0.000034689354],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018975214,0.00018923792,0.0002496211,0.00018439876,0.0001638728,0.00039999804,0.00015709137,0.00039114399,0.003547004],"category_scores_gemma":[0.00013495712,0.00007505092,0.0002552533,0.00015929664,0.00018950245,0.00026228133,0.0001944494,0.00058814755,0.0011074187],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044237127,0.000033042885,0.000259894,0.000055863104,0.000004009306,0.00008760409,0.000013317902,0.00006561518,0.9966192,0.0002639223,0.00009537225,0.002059837],"study_design_scores_gemma":[0.00004467578,0.00068765006,0.011147876,0.000022538597,0.000017927352,0.0006413104,0.000047994425,0.0010383949,0.98012346,0.00029725922,0.0059240204,0.0000070977076],"about_ca_topic_score_codex":0.00025362262,"about_ca_topic_score_gemma":0.000167473,"teacher_disagreement_score":0.003547004,"about_ca_system_score_codex":0.0002587415,"about_ca_system_score_gemma":0.00016292847,"threshold_uncertainty_score":0.011865914},"labels":[],"label_agreement":null},{"id":"W4389235020","doi":"10.1182/blood-2023-178696","title":"Inhibiting Mitochondrial RNA Degradosome Complex SUV3 and PNPT1 Increases dsRNA in the Cytoplasm, Triggers Viral Mimicry Response and Sensitizes AML Cells to Immune Mediated Killing","year":2023,"lang":"en","type":"article","venue":"Blood","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Toronto General Hospital; Princess Margaret Cancer Centre","funders":"","keywords":"Biology; RNA Helicase A; Molecular biology; Gene knockdown; Small hairpin RNA; Gene; RNA; Mitochondrial DNA; RNA silencing; RNA interference; Cell biology; Genetics; Helicase","score_opus":0.014632703423219331,"score_gpt":0.23650155125431713,"score_spread":0.22186884783109778,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389235020","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9900933,0.0021809714,0.0030335113,0.00016267742,0.000059030677,0.000051095467,0.0029492774,0.00035889196,0.001111374],"genre_scores_gemma":[0.9897413,0.00082478544,0.0027973778,0.00011482523,0.0000086184245,0.00006929257,0.0049377596,0.00003457563,0.001471361],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981004,0.000016858698,0.00002096383,0.000045051722,0.0000645963,0.000042497795],"domain_scores_gemma":[0.99991965,0.000016891994,0.000025851716,0.000006626391,0.000008528082,0.000022401277],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015466394,0.00028350254,0.00045244527,0.00024497395,0.00012214769,0.00034253567,0.00017091238,0.00022251393,0.0013887429],"category_scores_gemma":[0.00017419501,0.00011733079,0.00039528735,0.00020301851,0.00013415175,0.00013239853,0.0001632636,0.00052542554,0.000344597],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043506152,0.000060100097,0.001179017,0.00010131041,0.000026281818,0.000040785424,0.000010845386,0.0003357496,0.9943926,0.00006399471,0.00019943315,0.0031548622],"study_design_scores_gemma":[0.000053037864,0.0006459233,0.0091787325,0.0000112018515,0.0000614463,0.00020015686,0.000034400142,0.0050667706,0.98164153,0.0000681069,0.0030313078,0.0000073661163],"about_ca_topic_score_codex":0.00056827714,"about_ca_topic_score_gemma":0.0009841495,"teacher_disagreement_score":0.0013887429,"about_ca_system_score_codex":0.0002651944,"about_ca_system_score_gemma":0.00022414884,"threshold_uncertainty_score":0.004645765},"labels":[],"label_agreement":null},{"id":"W4389240058","doi":"10.1158/2326-6074.tumimm23-b036","title":"Abstract B036: cGAS-STING activation promotes anti-tumor inflammatory response in osteosarcoma: Implications for tumor microenvironment reprogramming and tumor progression in patients","year":2023,"lang":"en","type":"article","venue":"Cancer Immunology Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Tumor microenvironment; Sting; Stimulator of interferon genes; Innate immune system; Cancer research; Immune system; Tumor necrosis factor alpha; Macrophage polarization; Immunology; Macrophage; Reprogramming; Biology; Medicine; Cell; In vitro","score_opus":0.04514764148239905,"score_gpt":0.365085682048669,"score_spread":0.31993804056626995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389240058","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981067,0.00046206146,0.00050133944,0.000057455058,0.0000115867815,0.00002031363,0.00032544052,0.000020535505,0.00049448066],"genre_scores_gemma":[0.99824274,0.00018877652,0.0004765388,0.00004745775,0.0000070884043,0.000025037378,0.00044807125,0.00000405958,0.00056011474],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998996,0.00002026164,0.000010571173,0.000018248149,0.000022160679,0.000029106253],"domain_scores_gemma":[0.99993324,0.000009597229,0.000016139871,0.000005653311,0.000008521432,0.000026954032],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016583483,0.00016951708,0.00021765045,0.00016028761,0.00011009209,0.00022673857,0.000070650116,0.00016789751,0.0021201256],"category_scores_gemma":[0.000112382746,0.00006600536,0.00018829461,0.0001714149,0.0001378831,0.000091776856,0.00010237968,0.00043096114,0.00031570497],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010172346,0.00013209341,0.0041649044,0.00004315754,0.0000064806322,0.00009272738,0.00003273404,0.000099373574,0.99087805,0.00006731523,0.00012907569,0.0033368508],"study_design_scores_gemma":[0.00016035058,0.006006384,0.10937875,0.000022825747,0.000054991717,0.0013596601,0.0003023306,0.00241894,0.87516654,0.00014898115,0.0049705305,0.000009654379],"about_ca_topic_score_codex":0.000436194,"about_ca_topic_score_gemma":0.00050248136,"teacher_disagreement_score":0.0021201256,"about_ca_system_score_codex":0.00017007126,"about_ca_system_score_gemma":0.00018485595,"threshold_uncertainty_score":0.007092595},"labels":[],"label_agreement":null},{"id":"W4389244652","doi":"10.1158/2326-6074.tumimm23-a012","title":"Abstract A012: STING agonists drive intrinsic type I interferon responses in monocytes for optimal anti-tumor immunity","year":2023,"lang":"en","type":"article","venue":"Cancer Immunology Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Stimulator of interferon genes; Sting; Immunology; Interferon; Antigen; Antigen presentation; Biology; Immune system; Cancer research; Immunotherapy; Chemokine; Agonist; T cell; Innate immune system; Receptor","score_opus":0.1160784814119432,"score_gpt":0.41451720734726144,"score_spread":0.2984387259353182,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389244652","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98319465,0.0030195455,0.0055234777,0.000503634,0.00024822887,0.00009330223,0.0036552371,0.00027996613,0.0034819213],"genre_scores_gemma":[0.989684,0.0007054618,0.0024479006,0.00026442608,0.000053175303,0.00008749802,0.0014605175,0.00003941792,0.005257497],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99977916,0.00003089483,0.000022718934,0.00005669113,0.00004566909,0.00006480681],"domain_scores_gemma":[0.9998596,0.000011968319,0.00003372439,0.000012764666,0.000018793826,0.00006308915],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013743652,0.00028427257,0.0003207585,0.00014402978,0.00017998801,0.00045589657,0.00012358381,0.00034642778,0.0062973513],"category_scores_gemma":[0.00009328415,0.00012342753,0.00028103153,0.000117384734,0.00018760754,0.00018961595,0.00019600877,0.00095511664,0.0016639734],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003653713,0.000026733163,0.00021672466,0.000060254108,0.0000027563372,0.00003147123,0.000011289433,0.000026654297,0.99781775,0.000085828695,0.0001766261,0.0011785425],"study_design_scores_gemma":[0.00007352622,0.00076389976,0.008797751,0.000026063419,0.000024773755,0.00023013097,0.00007728922,0.00094351795,0.9818735,0.000102352344,0.0070794467,0.000007664414],"about_ca_topic_score_codex":0.00033808965,"about_ca_topic_score_gemma":0.00047263788,"teacher_disagreement_score":0.0062973513,"about_ca_system_score_codex":0.00029217842,"about_ca_system_score_gemma":0.00023153251,"threshold_uncertainty_score":0.021066725},"labels":[],"label_agreement":null},{"id":"W4390225084","doi":"10.1016/j.jacbts.2023.09.005","title":"Tit for TAK1","year":2023,"lang":"en","type":"editorial","venue":"JACC Basic to Translational Science","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Libin Cardiovascular Institute of Alberta; University of Calgary","funders":"Canadian Institutes of Health Research; Coral Reef Conservation Program; Canada Research Chairs","keywords":"Computer science","score_opus":0.01848130349053415,"score_gpt":0.3139602712245347,"score_spread":0.2954789677340005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390225084","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00028031063,0.016033748,0.0015020906,0.07344728,0.86809874,0.00019296083,0.0006511761,0.0009878101,0.038805928],"genre_scores_gemma":[0.006592246,0.021514628,0.0034817765,0.091950245,0.43620047,0.0005370827,0.0014066898,0.0007448993,0.4375719],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99919194,0.00011109295,0.000057283618,0.0001528971,0.00034508988,0.00014176681],"domain_scores_gemma":[0.9988977,0.00026456,0.00010581092,0.00007495129,0.00031036834,0.00034665357],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011141155,0.0018836556,0.0015204577,0.0014985786,0.0015847982,0.0025098,0.002112205,0.0052416306,0.15686171],"category_scores_gemma":[0.0028438414,0.0009000915,0.002115783,0.0006188688,0.0011164274,0.001533917,0.0014211005,0.010197295,0.07229351],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000679267,0.00000996186,0.000008951317,0.00021739778,0.000014717327,0.00006892944,0.000005219495,0.000026366377,0.0008119786,0.0010641998,0.9872822,0.010422294],"study_design_scores_gemma":[0.00007331208,0.000020750113,0.0000879375,0.00005935555,0.000024319776,0.00012657481,0.0000072751163,0.000071504546,0.00040528263,0.00077870686,0.9983365,0.000008491127],"about_ca_topic_score_codex":0.0012732962,"about_ca_topic_score_gemma":0.002832162,"teacher_disagreement_score":0.15686171,"about_ca_system_score_codex":0.001409765,"about_ca_system_score_gemma":0.0017081895,"threshold_uncertainty_score":0.5247547},"labels":[],"label_agreement":null},{"id":"W4390236172","doi":"10.3390/ijms25010299","title":"RanBP2/Nup358 Mediates Sumoylation of STAT1 and Antagonizes Interferon-α-Mediated Antiviral Innate Immunity","year":2023,"lang":"en","type":"article","venue":"International Journal of Molecular Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Fujian Medical University; Natural Science Foundation of Fujian Province","keywords":"Innate immune system; Interferon; Biology; Cell biology; Intrinsic immunity; Signal transduction; STAT1; SUMO protein; Janus kinase; Immune system; Virology; Immunology; Genetics","score_opus":0.015116675169721731,"score_gpt":0.28990933253184703,"score_spread":0.2747926573621253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390236172","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912935,0.0028637298,0.0031058437,0.000107790074,0.00005253439,0.000020585736,0.00018970176,0.00009567584,0.0022705204],"genre_scores_gemma":[0.9966377,0.00063266425,0.00084262766,0.00003530431,0.000009760264,0.000017605156,0.00029529055,0.000011570038,0.0015173947],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983406,0.000035629375,0.000013881682,0.00002964005,0.000040763738,0.000046018482],"domain_scores_gemma":[0.9999442,0.000007170714,0.000015271156,0.000007712284,0.0000062157155,0.000019474519],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018615014,0.00041415697,0.00030948076,0.00017046936,0.00020447026,0.00024449165,0.0002227249,0.0002504297,0.0012866858],"category_scores_gemma":[0.00009539072,0.00013094711,0.00026298597,0.00010468873,0.0002590535,0.0002085629,0.00019734114,0.00044711315,0.00046249072],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014430172,0.000018104005,0.00011711336,0.000031216252,0.0000053575286,0.000050300896,0.0000061741985,0.000055828223,0.99886775,0.00007869656,0.00003185374,0.00059333805],"study_design_scores_gemma":[0.000026055512,0.00017365546,0.003432116,0.0000044720755,0.000011198718,0.00034426467,0.000017418048,0.0014548614,0.99257237,0.000043235166,0.0019163802,0.00000400802],"about_ca_topic_score_codex":0.0003489993,"about_ca_topic_score_gemma":0.00066051923,"teacher_disagreement_score":0.0012866858,"about_ca_system_score_codex":0.00020745619,"about_ca_system_score_gemma":0.00018681746,"threshold_uncertainty_score":0.004304409},"labels":[],"label_agreement":null},{"id":"W4390607948","doi":"10.21203/rs.3.rs-3737244/v1","title":"OAS Gene Family Expression is Associated with Clinical Outcomes in Human Cancers","year":2024,"lang":"en","type":"preprint","venue":"Research Square","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"","keywords":"Carcinogenesis; Cancer research; Biology; Adenocarcinoma; Kidney cancer; Renal cell carcinoma; Biomarker; Cancer; Thymoma; Pathology; Medicine; Immunology; Genetics","score_opus":0.11463900097825536,"score_gpt":0.45764138001458876,"score_spread":0.3430023790363334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390607948","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928012,0.0020611247,0.00042521747,0.000097625205,0.000014337232,0.000009337284,0.0038098134,0.000025234336,0.0007561112],"genre_scores_gemma":[0.99627316,0.00038074638,0.00026280482,0.00002437661,0.000011884676,0.000011157488,0.0027798,0.0000049428395,0.00025101396],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997249,0.00004882148,0.000040531522,0.00008121026,0.00006303441,0.00004146129],"domain_scores_gemma":[0.99915993,0.00018619397,0.0004524352,0.000044918645,0.00008079251,0.0000758618],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003720733,0.00014155517,0.00023528452,0.0009738698,0.00018520631,0.00040659594,0.00012620496,0.00019727564,0.0017478948],"category_scores_gemma":[0.0010208276,0.000052191215,0.00027600524,0.0014163811,0.00015041443,0.00015088978,0.0002901788,0.0002568908,0.00022196256],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037646687,0.000022695685,0.9849799,0.00007024686,0.00013042703,0.00013086248,0.000032647582,0.00013923092,0.007877542,0.000040541545,0.0003305073,0.005868965],"study_design_scores_gemma":[0.000005859666,0.000037383008,0.9963701,0.000015597012,0.000073900854,0.00040254008,0.000085284024,0.00047639798,0.0013870518,0.00010966154,0.0010323183,0.0000040119753],"about_ca_topic_score_codex":0.0009263667,"about_ca_topic_score_gemma":0.0012945031,"teacher_disagreement_score":0.0017478948,"about_ca_system_score_codex":0.00017726225,"about_ca_system_score_gemma":0.000158432,"threshold_uncertainty_score":0.005847335},"labels":[],"label_agreement":null},{"id":"W4390656833","doi":"10.1101/2023.12.31.573785","title":"An ATP-Binding Cassette Transporter Gene Links Innate and Adaptive Immune Responses","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; Vancouver General Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; Centre for Blood Research, University of British Columbia; Urology Foundation","keywords":"Biology; Innate immune system; Vesicular stomatitis virus; Immune system; Interferon; RNA silencing; TLR3; Virology; Cell biology; Gene; Immunology; RNA; Virus; Genetics; RNA interference; Toll-like receptor","score_opus":0.015892659993581974,"score_gpt":0.2372828471886176,"score_spread":0.22139018719503564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390656833","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923233,0.002137876,0.0031324106,0.0004891979,0.00006985221,0.000020218838,0.0004397517,0.00008235031,0.0013051842],"genre_scores_gemma":[0.9956442,0.0003785226,0.0010077301,0.00010557074,0.000014380786,0.000013502721,0.00035669378,0.0000053974763,0.0024739322],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999448,0.000008051973,0.0000043945815,0.00001597327,0.000011548096,0.000015237558],"domain_scores_gemma":[0.999941,0.000011298178,0.000018248991,0.000003031794,0.000009078834,0.000017336375],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000058677535,0.00016428255,0.00012278986,0.00012865811,0.00008869619,0.00019857557,0.00011385716,0.00043305752,0.0027042583],"category_scores_gemma":[0.0000866785,0.00006282242,0.0001210853,0.00008315588,0.00013094362,0.00011513521,0.00009793742,0.0002777504,0.0004251291],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000109623856,0.000031473544,0.0024925566,0.000042409276,0.000007699842,0.00037653174,0.000011558876,0.000087705106,0.99349666,0.00041630416,0.00020254342,0.0027248948],"study_design_scores_gemma":[0.00014179743,0.0006719499,0.10851659,0.00005211981,0.00008417018,0.0057364823,0.00018677961,0.012816716,0.8496832,0.0017261882,0.020358656,0.000025245106],"about_ca_topic_score_codex":0.00037922311,"about_ca_topic_score_gemma":0.00033132662,"teacher_disagreement_score":0.0027042583,"about_ca_system_score_codex":0.00022939207,"about_ca_system_score_gemma":0.00010871804,"threshold_uncertainty_score":0.009046674},"labels":[],"label_agreement":null},{"id":"W4390753420","doi":"10.18060/27729","title":"TRIM31: A Protein With an Oncogenic Role in Esophageal Adenocarcinoma","year":2024,"lang":"en","type":"article","venue":"Proceedings of IMPRS","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Cancer Research","funders":"","keywords":"Esophageal adenocarcinoma; Cancer research; Adenocarcinoma; Medicine; Internal medicine; Cancer","score_opus":0.007157380414983122,"score_gpt":0.23076263269619005,"score_spread":0.22360525228120692,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390753420","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9860669,0.0074870912,0.0027523409,0.00030381305,0.0000615829,0.000043937172,0.0013551062,0.00014788631,0.0017813037],"genre_scores_gemma":[0.9892218,0.002301835,0.0028453197,0.00019946649,0.00003602231,0.000032921722,0.0029238812,0.00001487443,0.0024238832],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999043,0.000010122093,0.000007302026,0.000027197102,0.000027715749,0.000023374218],"domain_scores_gemma":[0.9998789,0.000014734096,0.00003970288,0.000012009436,0.000023231596,0.00003145931],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013848921,0.00023582192,0.0001816407,0.00033265058,0.0004048331,0.00025463494,0.00015999872,0.00047626728,0.0012594806],"category_scores_gemma":[0.00018284403,0.000104157705,0.0003021565,0.0004173689,0.00020424735,0.00023516857,0.00025517133,0.00033792015,0.0007442091],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031262,0.00002581081,0.004096336,0.00016572213,0.000010261574,0.00070946914,0.000041730833,0.0001421086,0.98970056,0.0001490334,0.00046061724,0.0041857385],"study_design_scores_gemma":[0.000053869502,0.0010986807,0.15614891,0.000086360655,0.00015229097,0.012471875,0.00033679925,0.005344894,0.7920715,0.0006398367,0.031553626,0.000041275893],"about_ca_topic_score_codex":0.0003341779,"about_ca_topic_score_gemma":0.00038703534,"teacher_disagreement_score":0.0012594806,"about_ca_system_score_codex":0.00033941036,"about_ca_system_score_gemma":0.00017319965,"threshold_uncertainty_score":0.0042133927},"labels":[],"label_agreement":null},{"id":"W4390779193","doi":"10.1158/1538-7445.dnarepair24-ia020","title":"Abstract IA020: Micronuclei are a nexus of DNA damage signaling and genomic instability","year":2024,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"","keywords":"Genome instability; Micronucleus test; DNA damage; Chromothripsis; Biology; Chromatin; DNA repair; Chromosome instability; Cell biology; Genetics; Cancer research; DNA; Gene; Chemistry; Chromosome","score_opus":0.0641664662003624,"score_gpt":0.3693618925466047,"score_spread":0.3051954263462423,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390779193","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.57697815,0.14826952,0.043446083,0.033346497,0.011265744,0.00067905604,0.012112504,0.0042620446,0.16964038],"genre_scores_gemma":[0.7195346,0.033409726,0.017692374,0.0035876182,0.0022411915,0.00020804441,0.008106073,0.00033575398,0.21488464],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998053,0.000016257534,0.000015983507,0.000055866767,0.00007984821,0.000026834456],"domain_scores_gemma":[0.9997296,0.000033813423,0.00005859756,0.000015202667,0.000069249036,0.00009347884],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030340845,0.00040098283,0.00041376057,0.0011581938,0.0006513936,0.0012802772,0.00048720863,0.00094623555,0.011066534],"category_scores_gemma":[0.00025308566,0.00021961014,0.0001580626,0.000492621,0.0006946043,0.00064341666,0.0007992907,0.0012504441,0.0032092335],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008374983,0.000073647745,0.002619121,0.0006172776,0.00003343179,0.0010597324,0.00017385262,0.00026955674,0.90736926,0.004096731,0.024821302,0.05802862],"study_design_scores_gemma":[0.000053584252,0.0005099534,0.06544196,0.00018974509,0.00007073189,0.0063281036,0.0004021944,0.0018196038,0.7124405,0.008380202,0.20429902,0.00006441256],"about_ca_topic_score_codex":0.0013272618,"about_ca_topic_score_gemma":0.0026285483,"teacher_disagreement_score":0.011066534,"about_ca_system_score_codex":0.00093078817,"about_ca_system_score_gemma":0.00048024865,"threshold_uncertainty_score":0.03702122},"labels":[],"label_agreement":null},{"id":"W4390793796","doi":"10.4049/jimmunol.2300493","title":"USP13 Cooperates with MARCH8 to Inhibit Antiviral Signaling by Targeting MAVS for Autophagic Degradation in Teleost","year":2024,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Natural Science Foundation of China","keywords":"RIG-I; Innate immune system; Ubiquitin; Biology; Deubiquitinating enzyme; Cell biology; Signal transducing adaptor protein; Ubiquitin ligase; Autophagy; Regulator; Signal transduction; Receptor; Gene; Genetics; Apoptosis","score_opus":0.008357003920502594,"score_gpt":0.24555877299298706,"score_spread":0.23720176907248447,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390793796","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996947,0.0006093595,0.0015589994,0.000056334746,0.000017161017,0.000009968826,0.00012804591,0.00005165802,0.00062158756],"genre_scores_gemma":[0.9963038,0.00019749645,0.0012583197,0.000031368865,0.000004723491,0.00001392536,0.00024402214,0.000013449906,0.001933],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998809,0.000014282548,0.000017141609,0.000025887055,0.000027921074,0.00003390748],"domain_scores_gemma":[0.9999243,0.000009079401,0.000024169496,0.000009488888,0.0000077151835,0.000025221401],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016845974,0.00027234983,0.00025303234,0.0001578361,0.0002060025,0.0002679619,0.00018274241,0.00029742942,0.0011750226],"category_scores_gemma":[0.00011816153,0.00015936593,0.0004924327,0.00007780282,0.0003346756,0.00021154057,0.00030090282,0.0003310554,0.00029601215],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016586224,0.000008578219,0.000985664,0.000038476526,0.000008260063,0.000117545766,0.000010469129,0.0000675389,0.99756205,0.00012416017,0.000038557268,0.00087281823],"study_design_scores_gemma":[0.000018772751,0.00011619248,0.008752679,0.0000035556995,0.000017675373,0.00035956153,0.000024370947,0.001288968,0.98766774,0.000063946005,0.0016825653,0.000004027322],"about_ca_topic_score_codex":0.00061781687,"about_ca_topic_score_gemma":0.0009962483,"teacher_disagreement_score":0.0011750226,"about_ca_system_score_codex":0.00047425015,"about_ca_system_score_gemma":0.00028292605,"threshold_uncertainty_score":0.003930807},"labels":[],"label_agreement":null},{"id":"W4391056045","doi":"10.1016/j.antiviral.2024.105811","title":"Activation of cGAS-STING suppresses coxsackievirus replication via interferon-dependent signaling","year":2024,"lang":"en","type":"article","venue":"Antiviral Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Michael Smith Health Research BC","keywords":"Stimulator of interferon genes; Sting; Interferon; Signal transduction; Gene knockdown; Biology; IRF3; Cell biology; Interferon regulatory factors; Interferon type I; TANK-binding kinase 1; Viral replication; Virus; Virology; Receptor; Innate immune system; Gene; MAPK/ERK pathway; Biochemistry","score_opus":0.08233381906551915,"score_gpt":0.39395751064259904,"score_spread":0.3116236915770799,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391056045","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99265176,0.0031984383,0.001618795,0.00016191331,0.000060255497,0.000036560123,0.00030415284,0.000094706644,0.0018734025],"genre_scores_gemma":[0.9967638,0.0009673489,0.00087788724,0.00006069478,0.000011344778,0.00003420919,0.00028794105,0.0000049236132,0.0009919383],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999002,0.00001863425,0.000009633222,0.00001562738,0.000020926087,0.000034889104],"domain_scores_gemma":[0.9999585,0.000006189954,0.000013814744,0.000004549736,0.000003934184,0.000013015443],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010897066,0.00027846044,0.00023074244,0.0001366432,0.00011024693,0.00022057649,0.00012519263,0.00020782006,0.0008683545],"category_scores_gemma":[0.00008245256,0.00007754003,0.00022763555,0.00009709031,0.0001725436,0.00013962956,0.00013942573,0.00064677047,0.00020803856],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002816308,0.000057970392,0.00015986491,0.000062305946,0.0000060172865,0.00003144704,0.000010982655,0.000078809135,0.9968407,0.00010274994,0.00007372193,0.0022937523],"study_design_scores_gemma":[0.00006997136,0.00078875135,0.004129231,0.000011624538,0.000023536828,0.00020920888,0.000030452937,0.0019384887,0.98933625,0.000062616964,0.00339444,0.000005395086],"about_ca_topic_score_codex":0.0004287045,"about_ca_topic_score_gemma":0.00082680857,"teacher_disagreement_score":0.0008683545,"about_ca_system_score_codex":0.00021462176,"about_ca_system_score_gemma":0.00026421619,"threshold_uncertainty_score":0.002904892},"labels":[],"label_agreement":null},{"id":"W4391164985","doi":"10.1093/ecco-jcc/jjad212.0274","title":"P144 Modulation of Immunometabolism via NLRX1 or PLXDC2: Novel Bimodal Mechanisms for the Treatment of Inflammatory Bowel Diseases","year":2024,"lang":"en","type":"article","venue":"Journal of Crohn s and Colitis","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; University of Calgary","funders":"","keywords":"Extracellular; Intracellular; Cell biology; Colitis; Immune system; Biology; Inflammation; Cytokine; Glycolysis; Chemistry; Biochemistry; Immunology; Metabolism","score_opus":0.012395722684509097,"score_gpt":0.2542615361190717,"score_spread":0.24186581343456262,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391164985","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89026177,0.0874509,0.009513731,0.0023037463,0.00057787925,0.00045147963,0.00068901596,0.00040304483,0.00834836],"genre_scores_gemma":[0.9680278,0.019116305,0.005959257,0.00050437247,0.0003581021,0.0003525667,0.00051593577,0.000027606417,0.0051380433],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999267,0.00001743877,0.000008319249,0.000015668906,0.000018166373,0.000013761983],"domain_scores_gemma":[0.9999696,0.000004198196,0.000010463546,0.0000031418822,0.0000037645168,0.00000876827],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021040747,0.0003018657,0.00041781057,0.00020493614,0.00012468071,0.00034818193,0.0003146098,0.0003469417,0.0024178997],"category_scores_gemma":[0.00007878685,0.0000686473,0.00025153285,0.00015562937,0.00025581635,0.0002188286,0.00019978685,0.0008119677,0.000377229],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0032774333,0.0008746017,0.0005457604,0.0010425113,0.0000648364,0.0005316977,0.0000606884,0.00030458058,0.9209735,0.0015297129,0.0016833462,0.0691114],"study_design_scores_gemma":[0.0064022117,0.02565012,0.0160998,0.00031691903,0.000405196,0.00447342,0.00017922444,0.0044558626,0.83308667,0.001863388,0.10701805,0.00004921247],"about_ca_topic_score_codex":0.000060221515,"about_ca_topic_score_gemma":0.00014369849,"teacher_disagreement_score":0.0024178997,"about_ca_system_score_codex":0.00013598628,"about_ca_system_score_gemma":0.00012621892,"threshold_uncertainty_score":0.008088648},"labels":[],"label_agreement":null},{"id":"W4391482346","doi":"10.1002/anie.202314501","title":"Metal‐Phenolic Nanocloaks on Cancer Cells Potentiate STING Pathway Activation for Synergistic Cancer Immunotherapy","year":2024,"lang":"en","type":"article","venue":"Angewandte Chemie International Edition","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Key Research and Development Program of China; Young Scientists Fund; Double First Class University Plan; Sichuan University; Hong Kong Government; Innovation and Technology Commission; National Natural Science Foundation of China; Australian Research Council; State Key Laboratory of Polymer Materials Engineering; Australian Government","keywords":"Sting; Cancer; Cancer immunotherapy; Immunotherapy; Cancer research; Medicine; Chemistry; Internal medicine","score_opus":0.0206557052405675,"score_gpt":0.29315794942475143,"score_spread":0.27250224418418395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391482346","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899815,0.0014630856,0.006026935,0.00011890406,0.000048620866,0.000038251826,0.00007212763,0.00011652355,0.0021341464],"genre_scores_gemma":[0.9948512,0.00037578272,0.002588033,0.000049288352,0.000008688543,0.000023112685,0.000033900338,0.000009489137,0.0020606301],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999938,0.000012726393,0.0000034235247,0.000013562402,0.000014166561,0.000018108667],"domain_scores_gemma":[0.99996126,0.000009744611,0.000011450814,0.0000041574544,0.0000061167416,0.000007308399],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007131924,0.00026109072,0.00011914805,0.000098913995,0.00007666107,0.00014996462,0.000107008724,0.00022014725,0.0011416358],"category_scores_gemma":[0.000069080255,0.00007251852,0.00015085597,0.00006114765,0.0001467942,0.00013002934,0.00016162731,0.00024009559,0.0002765916],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029124456,0.0000089743135,0.000023595469,0.000021908256,0.0000016209498,0.000010534277,0.0000057225493,0.00007351049,0.99906427,0.000043994525,0.00003312834,0.00068354944],"study_design_scores_gemma":[0.0000057605134,0.00012346133,0.00023676052,0.0000021635678,0.0000051081975,0.000024669129,0.000005357594,0.00096339354,0.9972932,0.000012938198,0.0013254939,0.0000017504487],"about_ca_topic_score_codex":0.00031107577,"about_ca_topic_score_gemma":0.00067836046,"teacher_disagreement_score":0.0011416358,"about_ca_system_score_codex":0.00018646297,"about_ca_system_score_gemma":0.00009961208,"threshold_uncertainty_score":0.0038191676},"labels":[],"label_agreement":null},{"id":"W4391482531","doi":"10.1002/ange.202314501","title":"Metal‐Phenolic Nanocloaks on Cancer Cells Potentiate STING Pathway Activation for Synergistic Cancer Immunotherapy","year":2024,"lang":"en","type":"article","venue":"Angewandte Chemie","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Key Research and Development Program of China; Young Scientists Fund; Double First Class University Plan; Sichuan University; Hong Kong Government; Innovation and Technology Commission; National Natural Science Foundation of China; Australian Research Council; State Key Laboratory of Polymer Materials Engineering; Australian Government","keywords":"Cancer immunotherapy; Immunotherapy; Cancer research; Immune system; Cancer; Cancer cell; Immune checkpoint; Antigen; Chemistry; Immunology; Medicine; Internal medicine","score_opus":0.02397951581993531,"score_gpt":0.28609580636042914,"score_spread":0.26211629054049385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391482531","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9910432,0.0011467234,0.0056359014,0.00011234808,0.000041947478,0.00003428489,0.00006321721,0.000109714674,0.0018126868],"genre_scores_gemma":[0.9955616,0.0002858945,0.0023425445,0.000046195186,0.000007585321,0.00002066396,0.00002960038,0.000008963437,0.0016968802],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999341,0.000013981633,0.0000035931369,0.000014454845,0.000014525543,0.000019377543],"domain_scores_gemma":[0.9999559,0.000011120689,0.000013218039,0.0000046898876,0.0000067273527,0.000008410002],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007654543,0.00026591495,0.000121181394,0.00010401854,0.00008195457,0.00014902322,0.00011091388,0.00023173612,0.0010993221],"category_scores_gemma":[0.00007490728,0.0000746364,0.00015026105,0.000059937804,0.00015844287,0.00013397074,0.00016565372,0.00024393841,0.00027115125],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030265484,0.000009075075,0.00002492892,0.000020596852,0.0000016675172,0.000010645969,0.0000058805917,0.000078431,0.99914753,0.000044479406,0.000030618532,0.00059582555],"study_design_scores_gemma":[0.00000592734,0.000119017706,0.00023165204,0.000002072683,0.0000048616844,0.000024136647,0.0000054722927,0.0010577011,0.99735755,0.000012571344,0.0011772185,0.0000017389277],"about_ca_topic_score_codex":0.00031959062,"about_ca_topic_score_gemma":0.00071449595,"teacher_disagreement_score":0.0010993221,"about_ca_system_score_codex":0.00019912426,"about_ca_system_score_gemma":0.00009898655,"threshold_uncertainty_score":0.0036776066},"labels":[],"label_agreement":null},{"id":"W4391512506","doi":"10.1016/j.cirep.2024.200135","title":"Examining rainbow trout vig-3 expression patterns in vitro following treatment with type I IFN, poly IC or viral infection","year":2024,"lang":"en","type":"article","venue":"Comparative Immunology Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"Natural Sciences and Engineering Research Council of Canada; University of Waterloo","keywords":"Rainbow trout; In vitro; Virology; Biology; Viral infection; Trout; Microbiology; Fish <Actinopterygii>; Virus; Fishery; Biochemistry","score_opus":0.04706350054525172,"score_gpt":0.3139092060862732,"score_spread":0.2668457055410215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391512506","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936744,0.0005958626,0.002845574,0.00006431116,0.000037611884,0.000036367048,0.001261292,0.00006299898,0.0014215921],"genre_scores_gemma":[0.9837055,0.000586909,0.0044373423,0.00013681121,0.000018081164,0.00010274751,0.0031711424,0.00004088448,0.007800623],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988794,0.000010205498,0.000009465118,0.00003299573,0.000030225123,0.000029205037],"domain_scores_gemma":[0.9999,0.000022367385,0.000027619586,0.000010845588,0.000017794559,0.000021339994],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012611979,0.00025738432,0.00019912027,0.00021664133,0.00018025267,0.00024137727,0.00009070123,0.00020766299,0.0010029614],"category_scores_gemma":[0.00010539851,0.00014719086,0.0004082641,0.00015939388,0.00024725337,0.00016180356,0.00020477852,0.0005614659,0.00036167816],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002572566,0.0000042169477,0.00024788364,0.000008681893,0.0000010010066,0.000009391779,0.000013588881,0.000011288087,0.9995435,0.00001143669,0.000006882918,0.00011641618],"study_design_scores_gemma":[0.000009474502,0.00054716575,0.030085845,0.0000058512164,0.000021338741,0.00012675607,0.0001519846,0.00058605935,0.9669949,0.00005384626,0.0014063029,0.000010527911],"about_ca_topic_score_codex":0.0016364822,"about_ca_topic_score_gemma":0.0035787874,"teacher_disagreement_score":0.0016364822,"about_ca_system_score_codex":0.00039507844,"about_ca_system_score_gemma":0.00022631977,"threshold_uncertainty_score":0.0033552647},"labels":[],"label_agreement":null},{"id":"W4391880507","doi":"10.3389/fimmu.2024.1355945","title":"Sudocetaxel Zendusortide (TH1902) triggers the cGAS/STING pathway and potentiates anti-PD-L1 immune-mediated tumor cell killing","year":2024,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal; Theratechnologies (Canada)","funders":"Québec Consortium for Drug Discovery","keywords":"Immune system; Sting; Cancer research; Medicine; PD-L1; Immunology; Immunotherapy","score_opus":0.0062934263418375274,"score_gpt":0.20282483879745863,"score_spread":0.1965314124556211,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391880507","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99764603,0.00060118537,0.00062744535,0.000039245377,0.000015828646,0.000024671834,0.00013516491,0.00004710802,0.0008633506],"genre_scores_gemma":[0.9980507,0.00040919968,0.0006432644,0.000023538667,0.0000070396927,0.0000170897,0.00018600501,0.0000040510804,0.0006591545],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99994504,0.000009817678,0.0000053104213,0.00000906037,0.00001102577,0.000019686739],"domain_scores_gemma":[0.99997497,0.0000038032858,0.00000809048,0.000002235342,0.000001631249,0.000009182198],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000088211105,0.00024637516,0.00021010694,0.00012691421,0.000060811126,0.00015779365,0.00009506708,0.00016928464,0.00081545924],"category_scores_gemma":[0.000045291883,0.00007652273,0.00015805628,0.00008202259,0.00011867249,0.00012341117,0.00008982818,0.00035623478,0.00017076822],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002839244,0.00006108702,0.000105090505,0.000034082834,0.000003900276,0.00004602958,0.000005922652,0.00010966855,0.99724567,0.000042056796,0.000051682116,0.0020109068],"study_design_scores_gemma":[0.00010034544,0.0023160644,0.0017548704,0.0000037902812,0.000012880352,0.00034042873,0.000009946161,0.0009795137,0.99302083,0.000018305693,0.001439373,0.0000035745722],"about_ca_topic_score_codex":0.00019788208,"about_ca_topic_score_gemma":0.00043483937,"teacher_disagreement_score":0.00081545924,"about_ca_system_score_codex":0.0001724653,"about_ca_system_score_gemma":0.00014009833,"threshold_uncertainty_score":0.0027279854},"labels":[],"label_agreement":null},{"id":"W4392196652","doi":"10.3389/fimmu.2024.1374701","title":"Editorial: CD24 in the regulation of cellular development and disease","year":2024,"lang":"en","type":"editorial","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Chronic fatigue syndrome; Encephalomyelitis; CD24; Immune system; Immunology; Disease; Medicine; Priming (agriculture); Neuroscience; Cancer; Biology; Multiple sclerosis; Psychiatry; Internal medicine; Breast cancer","score_opus":0.004816628253830769,"score_gpt":0.2190162560868606,"score_spread":0.21419962783302982,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392196652","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00011334145,0.008558554,0.00017801397,0.026302185,0.9626627,0.000030375644,0.000080001686,0.000109610366,0.0019653013],"genre_scores_gemma":[0.0005845273,0.004664006,0.00008908418,0.013206155,0.97486854,0.000020467096,0.000051355833,0.000029478662,0.006486522],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99684453,0.00051060284,0.00038861754,0.0005535286,0.0013635003,0.00033928972],"domain_scores_gemma":[0.9913156,0.0030565998,0.00059618114,0.00029388265,0.0029403544,0.0017973323],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004092998,0.0043773777,0.0032857975,0.0028632774,0.0020505055,0.0049814493,0.0035313177,0.013684295,0.021674111],"category_scores_gemma":[0.009807834,0.0011527181,0.0031084719,0.0009762527,0.002508676,0.004363898,0.0016379982,0.013753712,0.015955498],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012532504,0.00002638218,0.000056571116,0.00031061668,0.00002283906,0.0002037239,0.000011247393,0.000054995882,0.00017820756,0.00042481298,0.9879446,0.010640723],"study_design_scores_gemma":[0.00008040355,0.00007347496,0.0003250452,0.00033411506,0.00003560425,0.000402904,0.000024798828,0.00013098077,0.00017529808,0.00078899256,0.99760854,0.000019763791],"about_ca_topic_score_codex":0.0008482711,"about_ca_topic_score_gemma":0.0014661044,"teacher_disagreement_score":0.021674111,"about_ca_system_score_codex":0.0027573786,"about_ca_system_score_gemma":0.001628145,"threshold_uncertainty_score":0.0725072},"labels":[],"label_agreement":null},{"id":"W4392238178","doi":"10.3389/fimmu.2024.1389603","title":"Corrigendum: Sudocetaxel Zendusortide (TH1902) triggers the cGAS/STING pathway and potentiates anti-PD-L1 immune-mediated tumor cell killing","year":2024,"lang":"en","type":"erratum","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal; Theratechnologies (Canada)","funders":"","keywords":"Immune system; Sting; Cancer research; Medicine; Chemistry; Immunology","score_opus":0.009048185096765556,"score_gpt":0.2066807048067031,"score_spread":0.19763251970993756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392238178","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009103998,0.0021336642,0.0005272601,0.020327225,0.97327065,0.000018665509,0.00046158186,0.00029218826,0.002877734],"genre_scores_gemma":[0.010951824,0.019601028,0.0050543267,0.079499796,0.54877967,0.00019805838,0.0033928482,0.001325277,0.3311972],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99737775,0.0003463766,0.00035116397,0.00047677386,0.001128267,0.00031966405],"domain_scores_gemma":[0.993803,0.0012676576,0.0004011329,0.00037731024,0.0034586098,0.00069221423],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027197113,0.003080741,0.002746325,0.0034233173,0.003250073,0.003526487,0.0043943557,0.007891152,0.08727109],"category_scores_gemma":[0.015287098,0.0014734574,0.0022789119,0.0019905334,0.0028365026,0.0024981736,0.0023598503,0.008354822,0.048582528],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049485177,0.000009757962,0.0000418164,0.00019924542,0.000020051772,0.00033013424,0.000015286521,0.00005493371,0.00021916832,0.0008104188,0.9900969,0.008152776],"study_design_scores_gemma":[0.00004032245,0.000036632868,0.0005299473,0.0001978474,0.000057370184,0.00070364226,0.000043762222,0.00024219973,0.0010505262,0.0009942682,0.9960603,0.000043057422],"about_ca_topic_score_codex":0.011682567,"about_ca_topic_score_gemma":0.018908635,"teacher_disagreement_score":0.08727109,"about_ca_system_score_codex":0.0044569783,"about_ca_system_score_gemma":0.004015862,"threshold_uncertainty_score":0.29195088},"labels":[],"label_agreement":null},{"id":"W4392761475","doi":"10.1101/2024.03.08.584184","title":"Mechanisms of genomic instability dictate cytosolic DNA composition and dendritic cell mediated anti-tumor immunity","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; University of Alberta","keywords":"Cytotoxic T cell; Microsatellite instability; Immune system; Biology; Cancer research; Genome instability; T cell; Stimulator of interferon genes; Chemokine; Immunity; Innate immune system; DNA; Cell biology; Immunology; Gene; DNA damage; Genetics; Microsatellite","score_opus":0.009038775671104886,"score_gpt":0.20684976158237867,"score_spread":0.19781098591127377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392761475","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99265397,0.0020090328,0.00295706,0.0002490244,0.00003885916,0.0000224888,0.00041179097,0.00007101893,0.0015868349],"genre_scores_gemma":[0.99764144,0.00037111633,0.00056308944,0.00003519883,0.000014654653,0.000009719539,0.00022621536,0.000006897037,0.0011317285],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999213,0.000011591165,0.000004585984,0.000022822564,0.000020079582,0.000019758798],"domain_scores_gemma":[0.9999169,0.000011549548,0.00003603791,0.000006993593,0.000010183783,0.000018386801],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000107607324,0.0001936584,0.00015759066,0.00017723927,0.000091506125,0.00034186494,0.00008014813,0.00020546462,0.0018711302],"category_scores_gemma":[0.00014105151,0.00009630975,0.00013733473,0.00010671525,0.00019785302,0.00016992992,0.00017103025,0.00030808712,0.00047368702],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015441654,0.000014154357,0.0020423909,0.000047499747,0.0000037108439,0.00007210655,0.00001749309,0.00008216878,0.99531543,0.00026356796,0.000105965606,0.0018811617],"study_design_scores_gemma":[0.000025874724,0.00029793373,0.029502675,0.000013631811,0.000015818847,0.00073537935,0.00012402979,0.002122963,0.9632626,0.00042055882,0.0034731228,0.000005447815],"about_ca_topic_score_codex":0.00012580701,"about_ca_topic_score_gemma":0.00010927462,"teacher_disagreement_score":0.0018711302,"about_ca_system_score_codex":0.00032799933,"about_ca_system_score_gemma":0.0001308056,"threshold_uncertainty_score":0.0062595606},"labels":[],"label_agreement":null},{"id":"W4392767858","doi":"10.1016/j.gimo.2024.101837","title":"Exploring the phenotypic spectrum and osteopenia mechanisms in Yunis-Varón syndrome","year":2024,"lang":"en","type":"article","venue":"Genetics in Medicine Open","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute; Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; CHU Sainte-Justine Foundation","keywords":"Osteopenia; Phenotype; Medicine; Genetics; Internal medicine; Biology; Gene; Bone mineral; Osteoporosis","score_opus":0.06848407757394671,"score_gpt":0.30127393722569096,"score_spread":0.23278985965174426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392767858","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963869,0.00163867,0.0012602315,0.000034624405,0.00000398957,0.0000092289265,0.00013981435,0.000020610152,0.0005059044],"genre_scores_gemma":[0.9954591,0.0014678112,0.0025005725,0.000044714892,0.000011975362,0.0000140587645,0.00029013868,0.000012089423,0.00019959376],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99985504,0.000035068293,0.000022143,0.00004167824,0.000028736396,0.000017302744],"domain_scores_gemma":[0.9998677,0.000056489498,0.00003873361,0.000009752856,0.000010326574,0.00001693906],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021332035,0.0005085112,0.00024875582,0.0012800413,0.00014942422,0.00020021132,0.00024092755,0.000392466,0.00086436194],"category_scores_gemma":[0.0002987179,0.00012903701,0.00021822979,0.000522687,0.00027884354,0.00022041315,0.0003265282,0.00016104488,0.00009602913],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00055309135,0.00007445266,0.25586537,0.00035826975,0.00014463959,0.041752793,0.0005192637,0.00089873705,0.65299344,0.0004708859,0.00021934346,0.04614974],"study_design_scores_gemma":[0.000059621376,0.0008198218,0.77274144,0.00013855023,0.00025215745,0.15999416,0.0008502348,0.0023287558,0.056277297,0.0013497922,0.005142003,0.000046156838],"about_ca_topic_score_codex":0.0005122022,"about_ca_topic_score_gemma":0.0009651966,"teacher_disagreement_score":0.0012800413,"about_ca_system_score_codex":0.00010938669,"about_ca_system_score_gemma":0.00013715622,"threshold_uncertainty_score":0.0028915405},"labels":[],"label_agreement":null},{"id":"W4393093723","doi":"10.1158/1538-7445.am2024-3717","title":"Abstract 3717: Sudocetaxel Zendusortide (TH1902) triggers the cGAS/STING pathway and potentiates anti-PD-L1 immune-mediated tumor cell killing","year":2024,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal; Theratechnologies (Canada)","funders":"","keywords":"Immune system; Sting; Cancer research; Immunology; Medicine; Biology","score_opus":0.04241800642560123,"score_gpt":0.33431567785934796,"score_spread":0.29189767143374673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393093723","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99578816,0.0008187891,0.0007391509,0.00008220028,0.00004057862,0.000034497436,0.00055020046,0.00007373889,0.0018726609],"genre_scores_gemma":[0.99628735,0.00043838934,0.00070214074,0.000038906,0.000014806213,0.000023069824,0.00065592607,0.000009948473,0.0018293917],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999317,0.0000112497755,0.000006368769,0.000012258141,0.000013525428,0.000025054278],"domain_scores_gemma":[0.99997115,0.000004590142,0.000007832572,0.0000027410506,0.0000022408615,0.000011390871],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000076954995,0.00031337255,0.0002404789,0.000120626406,0.00008023255,0.0001718299,0.00012919781,0.00019079317,0.0025947874],"category_scores_gemma":[0.000041013463,0.00007477503,0.00016693604,0.00010483338,0.00013802134,0.0001287423,0.00009393471,0.00046892063,0.00046867953],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000599563,0.00010634478,0.00009566262,0.00005189369,0.0000056557137,0.0000675799,0.0000075803027,0.00010486663,0.99671113,0.00006542477,0.00016849673,0.0020157467],"study_design_scores_gemma":[0.00010232974,0.0019473473,0.0010751175,0.0000040575537,0.000011847945,0.00023009969,0.000009257077,0.0005409795,0.99436074,0.000015668862,0.0016998425,0.0000028040472],"about_ca_topic_score_codex":0.00034743256,"about_ca_topic_score_gemma":0.00044060062,"teacher_disagreement_score":0.0025947874,"about_ca_system_score_codex":0.00022326261,"about_ca_system_score_gemma":0.00020626685,"threshold_uncertainty_score":0.008680463},"labels":[],"label_agreement":null},{"id":"W4393164179","doi":"10.1371/journal.ppat.1012100","title":"Deubiquitinating activity of SARS-CoV-2 papain-like protease does not influence virus replication or innate immune responses in vivo","year":2024,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Leids Universitair Medisch Centrum; HORIZON EUROPE European Research Council; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; European Commission; University of Bern","keywords":"Biology; Innate immune system; Viral replication; Virus; Virology; Deubiquitinating enzyme; Immune system; Mutant; Proteases; Protease; ISG15; Coronavirus; Ubiquitin; Microbiology; Immunology; Genetics; Gene; Biochemistry; Enzyme","score_opus":0.03749212904206376,"score_gpt":0.3078632402778073,"score_spread":0.27037111123574353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393164179","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99664646,0.00063209387,0.0014767348,0.00005353132,0.00002658807,0.000014461198,0.00025990905,0.00004400965,0.0008461082],"genre_scores_gemma":[0.99672097,0.000283732,0.00079039496,0.000029374633,0.000006329416,0.000020437294,0.0004453156,0.000021111377,0.0016823482],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978584,0.00004203492,0.00002821402,0.00005252446,0.000042750373,0.000048609534],"domain_scores_gemma":[0.99984837,0.000032258613,0.00003882887,0.000032042757,0.000014161361,0.00003424604],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014385012,0.00040763026,0.0002421772,0.000107134925,0.00012000629,0.0003325339,0.0001588463,0.00027199663,0.0009310095],"category_scores_gemma":[0.0001228845,0.00013499096,0.00021954754,0.00008391094,0.0002432732,0.00022031399,0.00014319376,0.0005796534,0.0002204102],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008096333,0.000024655452,0.00011210113,0.000010015668,0.0000029708078,0.000022424845,0.0000048463003,0.000036875375,0.9993425,0.000032296703,0.000012294047,0.00031791456],"study_design_scores_gemma":[0.0000076192932,0.00022870155,0.0018891782,0.000001576044,0.0000077465165,0.00012848634,0.000008453034,0.0006086251,0.99611974,0.000019657322,0.0009774484,0.0000028176414],"about_ca_topic_score_codex":0.0003642715,"about_ca_topic_score_gemma":0.00048783806,"teacher_disagreement_score":0.0009310095,"about_ca_system_score_codex":0.00023693212,"about_ca_system_score_gemma":0.00014913213,"threshold_uncertainty_score":0.003114462},"labels":[],"label_agreement":null},{"id":"W4393187116","doi":"10.1016/j.apsb.2024.03.029","title":"Interferon-induced MXB protein restricts vimentin-dependent viral infection","year":2024,"lang":"en","type":"article","venue":"Acta Pharmaceutica Sinica B","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital","funders":"National Medical Research Council; National Natural Science Foundation of China","keywords":"Interferon; Biology; Vimentin; Virus; Virology; Viral replication; Intracellular; Cell biology; Immunology","score_opus":0.041256005358968555,"score_gpt":0.3394214871746216,"score_spread":0.29816548181565306,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393187116","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99058014,0.0025582488,0.0036191551,0.00008195266,0.000019491525,0.00002623932,0.0001451339,0.0000493101,0.0029203722],"genre_scores_gemma":[0.994995,0.00073308544,0.0021985823,0.00003319008,0.0000065593294,0.00001635443,0.00020947031,0.00000840156,0.0017993564],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999316,0.0000137756015,0.0000053030317,0.000011842739,0.00001621733,0.000021384492],"domain_scores_gemma":[0.9999645,0.000005278215,0.00000979987,0.0000046613995,0.0000043953805,0.00001134381],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000083677296,0.00013896846,0.00013734364,0.00012478253,0.00011047657,0.0001679164,0.000103061335,0.0001463693,0.00071400456],"category_scores_gemma":[0.00005646675,0.00007853294,0.00013799843,0.00004625324,0.00012508487,0.00010291481,0.00017074998,0.00028775472,0.00029833536],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022251666,0.000004075669,0.000108174776,0.000013395378,0.0000010860406,0.0000131330935,0.0000040399664,0.000013439651,0.99928623,0.000063942716,0.000015863092,0.00045435282],"study_design_scores_gemma":[0.0000108658005,0.00016442953,0.005560574,0.000016351714,0.000008917105,0.00032647836,0.000032666474,0.0010142018,0.9873016,0.00009532473,0.005465847,0.0000026936634],"about_ca_topic_score_codex":0.00025888905,"about_ca_topic_score_gemma":0.0004821203,"teacher_disagreement_score":0.00071400456,"about_ca_system_score_codex":0.00013678322,"about_ca_system_score_gemma":0.0001311328,"threshold_uncertainty_score":0.0023885965},"labels":[],"label_agreement":null},{"id":"W4393225348","doi":"10.1038/s41564-024-01646-5","title":"FEAR antiviral response pathway is independent of interferons and countered by poxvirus proteins","year":2024,"lang":"en","type":"article","venue":"Nature Microbiology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Welch Foundation; Natural Resources Canada; University of Alberta; Deutsches Krebsforschungszentrum; University of Washington; University of Texas Southwestern Medical Center; Division of Intramural Research, National Institute of Allergy and Infectious Diseases; National Institute of Allergy and Infectious Diseases; Cancer Prevention and Research Institute of Texas; National Institutes of Health; U.S. Department of Health and Human Services","keywords":"Biology; Chromatin; Viral replication; Effector; Interferon regulatory factors; Cell biology; Virology; Interferon; Transcription factor; Transcription (linguistics); Gene; RNA; Genetics; Virus","score_opus":0.0050079903303846575,"score_gpt":0.24187118637871366,"score_spread":0.236863196048329,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393225348","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9789316,0.00319276,0.008026942,0.00051887945,0.00032448702,0.00004997814,0.00022748945,0.00026265028,0.008465165],"genre_scores_gemma":[0.9904587,0.0007647691,0.0022602577,0.00017901958,0.000070567374,0.00003625489,0.0003145156,0.00003114732,0.0058847577],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997482,0.000032970107,0.000012254162,0.00006451264,0.000067237655,0.000074825344],"domain_scores_gemma":[0.99983776,0.000026426163,0.00004133899,0.00003164249,0.000020804002,0.000041965483],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021546918,0.0004874471,0.00028254002,0.00024667414,0.0003036029,0.0006080832,0.00021626509,0.0004342609,0.0021619094],"category_scores_gemma":[0.00017124157,0.00015736211,0.00042098053,0.00006792916,0.00044616053,0.00076316064,0.0004907079,0.0011725979,0.00047335884],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018990519,0.00001945035,0.0002456349,0.000028198661,0.0000063029324,0.000076756805,0.000012067431,0.000039240873,0.9958871,0.0012980677,0.0001041221,0.002093109],"study_design_scores_gemma":[0.000046659126,0.00032675793,0.013584286,0.000015881662,0.00002021328,0.00069355546,0.00007532725,0.00200136,0.9759197,0.0016900694,0.00561427,0.000011852622],"about_ca_topic_score_codex":0.00010876366,"about_ca_topic_score_gemma":0.00014449762,"teacher_disagreement_score":0.0021619094,"about_ca_system_score_codex":0.00030812764,"about_ca_system_score_gemma":0.00024062773,"threshold_uncertainty_score":0.007232368},"labels":[],"label_agreement":null},{"id":"W4393559322","doi":"10.5281/zenodo.7492473","title":"Clinical characterization of a multicenter international cohort of p.A177T RNASEH2B homozygous mutated Aicardi Goutières patients: in search for prognostic factors","year":2022,"lang":"en","type":"dataset","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital","funders":"","keywords":"Cohort; Medicine; Internal medicine; Oncology","score_opus":0.02622559900602698,"score_gpt":0.2824725263372497,"score_spread":0.2562469273312227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393559322","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.064698756,0.0011108608,0.00036546445,0.00013938406,0.000020088453,0.000074362135,0.9320274,0.00007189774,0.0014918951],"genre_scores_gemma":[0.05452583,0.00039306533,0.0005637139,0.000099541656,0.000016109609,0.00020269271,0.9435838,0.000024832429,0.0005904187],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992717,0.000106122236,0.00017211905,0.00027078463,0.00009707853,0.00008214579],"domain_scores_gemma":[0.9982749,0.000430677,0.00045792412,0.00035095497,0.0003109031,0.00017457073],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00092097814,0.0005936847,0.0013493353,0.0020719052,0.000324806,0.0010915477,0.0010893045,0.0007863962,0.006377283],"category_scores_gemma":[0.003685807,0.00023387522,0.00077273004,0.0032304954,0.00017814149,0.00043926595,0.0007931031,0.0004806416,0.0031565577],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0073704044,0.0003468844,0.66178936,0.0048571937,0.0021729332,0.0015868626,0.00023933823,0.0025880353,0.0031085252,0.0009990704,0.26844394,0.046497505],"study_design_scores_gemma":[0.0013229687,0.0003831616,0.79453194,0.0011783303,0.0011352162,0.0032831924,0.00030112022,0.0019416619,0.0016665206,0.00091760705,0.1932403,0.00009805284],"about_ca_topic_score_codex":0.0073135085,"about_ca_topic_score_gemma":0.007961705,"teacher_disagreement_score":0.0073135085,"about_ca_system_score_codex":0.000591756,"about_ca_system_score_gemma":0.0009326258,"threshold_uncertainty_score":0.021334112},"labels":[],"label_agreement":null},{"id":"W4393727823","doi":"10.5281/zenodo.7492472","title":"Clinical characterization of a multicenter international cohort of p.A177T RNASEH2B homozygous mutated Aicardi Goutières patients: in search for prognostic factors","year":2022,"lang":"en","type":"dataset","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital","funders":"","keywords":"Cohort; Medicine; Internal medicine; Oncology; Pediatrics","score_opus":0.02622559900602698,"score_gpt":0.2824725263372497,"score_spread":0.2562469273312227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393727823","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.064698756,0.0011108608,0.00036546445,0.00013938406,0.000020088453,0.000074362135,0.9320274,0.00007189774,0.0014918951],"genre_scores_gemma":[0.05452583,0.00039306533,0.0005637139,0.000099541656,0.000016109609,0.00020269271,0.9435838,0.000024832429,0.0005904187],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992717,0.000106122236,0.00017211905,0.00027078463,0.00009707853,0.00008214579],"domain_scores_gemma":[0.9982749,0.000430677,0.00045792412,0.00035095497,0.0003109031,0.00017457073],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00092097814,0.0005936847,0.0013493353,0.0020719052,0.000324806,0.0010915477,0.0010893045,0.0007863962,0.006377283],"category_scores_gemma":[0.003685807,0.00023387522,0.00077273004,0.0032304954,0.00017814149,0.00043926595,0.0007931031,0.0004806416,0.0031565577],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0073704044,0.0003468844,0.66178936,0.0048571937,0.0021729332,0.0015868626,0.00023933823,0.0025880353,0.0031085252,0.0009990704,0.26844394,0.046497505],"study_design_scores_gemma":[0.0013229687,0.0003831616,0.79453194,0.0011783303,0.0011352162,0.0032831924,0.00030112022,0.0019416619,0.0016665206,0.00091760705,0.1932403,0.00009805284],"about_ca_topic_score_codex":0.0073135085,"about_ca_topic_score_gemma":0.007961705,"teacher_disagreement_score":0.0073135085,"about_ca_system_score_codex":0.000591756,"about_ca_system_score_gemma":0.0009326258,"threshold_uncertainty_score":0.021334112},"labels":[],"label_agreement":null},{"id":"W4394141773","doi":"10.6084/m9.figshare.20226968","title":"Additional file 8 of Identification and integrated analysis of lncRNAs and miRNAs in IPEC-J2 cells provide novel insight into the regulation of the innate immune response by PDCoV infection","year":2022,"lang":"en","type":"dataset","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Identification (biology); Innate immune system; microRNA; Biology; Computational biology; Immune system; Immunology; Genetics; Gene; Ecology","score_opus":0.010800848289239167,"score_gpt":0.22835872593152462,"score_spread":0.21755787764228546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394141773","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000738658,0.000030349842,0.000046574627,0.000024352896,0.00000817674,0.000010734847,0.99955887,0.00011533621,0.0001317172],"genre_scores_gemma":[0.0012308928,0.000077076314,0.00060030224,0.00012305337,0.000011485395,0.00026939763,0.9966679,0.00016124098,0.00085860176],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991429,0.00011964275,0.00012484984,0.0003057178,0.00016503851,0.00014186413],"domain_scores_gemma":[0.99509037,0.0033377216,0.00033575823,0.00039917798,0.00057703693,0.00026000562],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013078226,0.00198894,0.0022817652,0.0026099377,0.0009751334,0.0025866872,0.0025649786,0.0023117836,0.40779415],"category_scores_gemma":[0.009981949,0.0006754279,0.0020159176,0.0037151675,0.00042783676,0.0012514878,0.0015908177,0.0016058779,0.10321809],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005663169,0.00010093039,0.0044815596,0.011081531,0.00030198615,0.00012227448,0.000079593374,0.0010237647,0.00094996026,0.0007373637,0.9748889,0.005665776],"study_design_scores_gemma":[0.0045284377,0.0002127201,0.025510851,0.0032467528,0.0005793007,0.0003780216,0.00022016815,0.0015709661,0.0022079907,0.005812725,0.9555734,0.00015861625],"about_ca_topic_score_codex":0.008123594,"about_ca_topic_score_gemma":0.017421937,"teacher_disagreement_score":0.40779415,"about_ca_system_score_codex":0.0011303724,"about_ca_system_score_gemma":0.0023643293,"threshold_uncertainty_score":0.84470975},"labels":[],"label_agreement":null},{"id":"W4394189653","doi":"10.6084/m9.figshare.20226962","title":"Additional file 6 of Identification and integrated analysis of lncRNAs and miRNAs in IPEC-J2 cells provide novel insight into the regulation of the innate immune response by PDCoV infection","year":2022,"lang":"en","type":"dataset","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Innate immune system; Identification (biology); microRNA; Computational biology; Biology; Immune system; Immunology; Gene; Genetics; Ecology","score_opus":0.010794466452985966,"score_gpt":0.2283189056622613,"score_spread":0.21752443920927533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394189653","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000058910395,0.000027906015,0.00003786715,0.000025069816,0.000006455837,0.000010373401,0.99962187,0.00008549948,0.00012604843],"genre_scores_gemma":[0.001414878,0.000094639116,0.0005935746,0.0001410537,0.000012735285,0.0003096186,0.9963707,0.00014882279,0.000914059],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99913883,0.00012462617,0.00014833779,0.00028926946,0.00016348528,0.00013540356],"domain_scores_gemma":[0.9933647,0.0046627424,0.0004807238,0.00050087745,0.0006921574,0.00029875815],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013461162,0.0017107307,0.0022153796,0.0025373707,0.0008624985,0.0026237236,0.0023883611,0.0024455937,0.4394838],"category_scores_gemma":[0.012067995,0.00066065835,0.0017741498,0.004024626,0.00043865712,0.0013489685,0.0014886446,0.0015943395,0.09804559],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00055615476,0.00008671213,0.0040156106,0.011758838,0.00024870335,0.00011913551,0.00007102532,0.0010149918,0.0006686158,0.0008502495,0.9749299,0.0056800917],"study_design_scores_gemma":[0.004728553,0.0002044719,0.022474386,0.0036155444,0.000463774,0.00035051862,0.00020333567,0.0013749421,0.0016726982,0.0061705606,0.9585966,0.0001446877],"about_ca_topic_score_codex":0.007681321,"about_ca_topic_score_gemma":0.014885196,"teacher_disagreement_score":0.4394838,"about_ca_system_score_codex":0.0011221216,"about_ca_system_score_gemma":0.0023374143,"threshold_uncertainty_score":0.79950833},"labels":[],"label_agreement":null},{"id":"W4394193176","doi":"10.6084/m9.figshare.20226965","title":"Additional file 7 of Identification and integrated analysis of lncRNAs and miRNAs in IPEC-J2 cells provide novel insight into the regulation of the innate immune response by PDCoV infection","year":2022,"lang":"en","type":"dataset","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Innate immune system; Identification (biology); microRNA; Computational biology; Biology; Immune system; Immunology; Gene; Genetics; Ecology","score_opus":0.01081244557772679,"score_gpt":0.22839827690252668,"score_spread":0.2175858313247999,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394193176","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000055615048,0.000027230164,0.00003406443,0.000025535086,0.000006557158,0.000010090873,0.99963343,0.000082777005,0.00012471201],"genre_scores_gemma":[0.0013113209,0.00009207072,0.000547917,0.00014015015,0.000012485217,0.000297837,0.99656785,0.00013771756,0.0008926792],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991387,0.00012389725,0.00014765353,0.00028244458,0.00016782361,0.00013944668],"domain_scores_gemma":[0.9934511,0.0045285486,0.00048032615,0.00049512694,0.00074217666,0.0003026575],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013494613,0.0017524294,0.002198234,0.002537722,0.0008716675,0.0026255073,0.0024428046,0.0024614693,0.44340265],"category_scores_gemma":[0.012160984,0.00066477695,0.0018002447,0.004020551,0.00044758242,0.0013769993,0.00154868,0.0016177539,0.10377887],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005136981,0.0000796524,0.0035061515,0.010975402,0.0002220608,0.00010830649,0.00006543916,0.0009026389,0.00060751976,0.00077966694,0.9771828,0.0050567607],"study_design_scores_gemma":[0.0048437775,0.0002001998,0.021316465,0.003962792,0.00044774832,0.0003360366,0.00021177139,0.001350338,0.0016451882,0.006120998,0.9594213,0.00014344223],"about_ca_topic_score_codex":0.007950625,"about_ca_topic_score_gemma":0.015562719,"teacher_disagreement_score":0.44340265,"about_ca_system_score_codex":0.0011585525,"about_ca_system_score_gemma":0.002426937,"threshold_uncertainty_score":0.79391855},"labels":[],"label_agreement":null},{"id":"W4394269952","doi":"10.6084/m9.figshare.20226971","title":"Additional file 9 of Identification and integrated analysis of lncRNAs and miRNAs in IPEC-J2 cells provide novel insight into the regulation of the innate immune response by PDCoV infection","year":2022,"lang":"en","type":"dataset","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Identification (biology); Innate immune system; Biology; Computational biology; microRNA; Immune system; Immunology; Genetics; Gene; Ecology","score_opus":0.010805889448829436,"score_gpt":0.22838120054317962,"score_spread":0.2175753110943502,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394269952","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000068287314,0.000027304077,0.000039649265,0.000024488083,0.000007801576,0.000009956001,0.9995919,0.00010542589,0.00012513965],"genre_scores_gemma":[0.0011820546,0.00007166988,0.0005438727,0.000119735785,0.000011129114,0.00024700735,0.9968644,0.00014191704,0.0008182432],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99911195,0.00012291486,0.00013453675,0.000313392,0.00016854408,0.00014859006],"domain_scores_gemma":[0.99494886,0.0034067375,0.00035717135,0.00040801064,0.0006100807,0.0002691793],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013332652,0.0019890508,0.002220694,0.00261015,0.0009829795,0.00264528,0.0025632263,0.0023567483,0.4179956],"category_scores_gemma":[0.010409876,0.00067723327,0.0019765415,0.0037130534,0.00043785066,0.0012980222,0.0016710161,0.0016275048,0.104456894],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00053808093,0.00009829376,0.0041640215,0.010116429,0.00026956326,0.00011578567,0.00007730802,0.0009325946,0.0008462276,0.00071652944,0.9768729,0.0052523403],"study_design_scores_gemma":[0.004647276,0.00021139528,0.024939306,0.003569276,0.00054647954,0.00036920753,0.00024041926,0.0015557187,0.0021736284,0.0061039715,0.95548046,0.00016280072],"about_ca_topic_score_codex":0.008607614,"about_ca_topic_score_gemma":0.017847743,"teacher_disagreement_score":0.4179956,"about_ca_system_score_codex":0.0011678782,"about_ca_system_score_gemma":0.0024509123,"threshold_uncertainty_score":0.83015865},"labels":[],"label_agreement":null},{"id":"W4394283280","doi":"10.6084/m9.figshare.20226953","title":"Additional file 4 of Identification and integrated analysis of lncRNAs and miRNAs in IPEC-J2 cells provide novel insight into the regulation of the innate immune response by PDCoV infection","year":2022,"lang":"en","type":"dataset","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Identification (biology); Innate immune system; microRNA; Immune system; Biology; Computational biology; Immunology; Genetics; Gene; Ecology","score_opus":0.010872470325484131,"score_gpt":0.22856616016043596,"score_spread":0.21769368983495183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394283280","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008554612,0.0000272266,0.00004500773,0.000026479607,0.00000756403,0.000010702729,0.9995646,0.0001095462,0.0001232762],"genre_scores_gemma":[0.0014167657,0.00006846936,0.0005433784,0.00011747069,0.000011452378,0.0002434372,0.99672145,0.00012734345,0.0007502603],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992428,0.000105187755,0.00012140855,0.00026517813,0.0001470026,0.00011845789],"domain_scores_gemma":[0.9950422,0.003472791,0.00035506886,0.00038184677,0.00050899456,0.00023911284],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012369226,0.001901205,0.0020637352,0.0021986407,0.0008215056,0.0023291926,0.0023616562,0.0024702824,0.39708027],"category_scores_gemma":[0.009930613,0.0006247087,0.0017502301,0.0032288346,0.00042788588,0.0012443739,0.0013469504,0.0016131826,0.095116034],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061759015,0.000109925335,0.004696409,0.009076888,0.00023623598,0.00013752386,0.00006458025,0.001315003,0.000749542,0.00073672296,0.9766806,0.0055789645],"study_design_scores_gemma":[0.0055024084,0.0002726752,0.025090847,0.00296414,0.0005020069,0.00046602165,0.00021175803,0.002456847,0.0023230237,0.006877682,0.9531686,0.00016382207],"about_ca_topic_score_codex":0.006979023,"about_ca_topic_score_gemma":0.014394034,"teacher_disagreement_score":0.39708027,"about_ca_system_score_codex":0.0011029562,"about_ca_system_score_gemma":0.002059846,"threshold_uncertainty_score":0.8599918},"labels":[],"label_agreement":null},{"id":"W4394318918","doi":"10.6084/m9.figshare.20226956","title":"Additional file 5 of Identification and integrated analysis of lncRNAs and miRNAs in IPEC-J2 cells provide novel insight into the regulation of the innate immune response by PDCoV infection","year":2022,"lang":"en","type":"dataset","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Innate immune system; Identification (biology); Biology; Immune system; Computational biology; microRNA; Virology; Immunology; Genetics; Gene; Ecology","score_opus":0.010797968798636424,"score_gpt":0.2283543630975556,"score_spread":0.21755639429891918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394318918","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008566984,0.000028227862,0.000043668417,0.000027821308,0.0000077796485,0.0000109375815,0.99956113,0.00010814976,0.00012666533],"genre_scores_gemma":[0.0013491986,0.000067999885,0.00053492456,0.000118885604,0.00001096909,0.00023667568,0.99683124,0.00011746066,0.0007325783],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992385,0.000109861925,0.00012421118,0.00026235316,0.00014564698,0.000119384174],"domain_scores_gemma":[0.9950718,0.0034062795,0.0003610855,0.00038158128,0.0005373413,0.00024182351],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012776873,0.0019067543,0.002046688,0.0021731788,0.0008293877,0.0023297754,0.0023272398,0.0024432996,0.3899964],"category_scores_gemma":[0.00996119,0.0006362743,0.0017282353,0.0032026584,0.0004252124,0.0012400983,0.0013696157,0.0016028129,0.09421157],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005996584,0.00011189699,0.0043769334,0.009030382,0.00022530381,0.00013386863,0.00006582603,0.0012441811,0.0007339643,0.00072493654,0.9773513,0.0054018665],"study_design_scores_gemma":[0.0053036367,0.00026311263,0.024193471,0.0031827781,0.00048225746,0.00044853252,0.00022117501,0.0023468558,0.0022836186,0.00675849,0.95435154,0.00016455246],"about_ca_topic_score_codex":0.0071554747,"about_ca_topic_score_gemma":0.014735876,"teacher_disagreement_score":0.3899964,"about_ca_system_score_codex":0.0010998264,"about_ca_system_score_gemma":0.0020934627,"threshold_uncertainty_score":0.8700961},"labels":[],"label_agreement":null},{"id":"W4394403386","doi":"10.6084/m9.figshare.21802839","title":"The nucleoprotein of influenza A virus inhibits the innate immune response by inducing mitophagy","year":2023,"lang":"en","type":"dataset","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Nucleoprotein; Innate immune system; Mitophagy; Virus; Virology; Immune system; Influenza A virus; Biology; Immunology; Autophagy; Genetics; Apoptosis","score_opus":0.026525570170838387,"score_gpt":0.2788857039953503,"score_spread":0.2523601338245119,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394403386","genre_codex":"empirical","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98613966,0.0037513487,0.0043544057,0.00024880457,0.00008144162,0.00003871646,0.0003068113,0.00017754962,0.004901209],"genre_scores_gemma":[0.9928256,0.0013797365,0.0031800212,0.00007444405,0.000017442577,0.000034139342,0.00035621272,0.000019105455,0.0021133001],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99994135,0.00001249013,0.000005261709,0.000011649769,0.000015641488,0.000013687916],"domain_scores_gemma":[0.99995553,0.000009627427,0.0000107819,0.000006089769,0.0000062971644,0.0000117421],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000070555856,0.0002529783,0.00016788181,0.00012512949,0.00011406723,0.00015625716,0.00013108242,0.0002126502,0.00091873534],"category_scores_gemma":[0.000060338785,0.000075258686,0.00017713758,0.00007404375,0.0001834131,0.00012469807,0.0001332297,0.0003991587,0.00035642437],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052605617,0.000013926877,0.000092385715,0.000026654729,0.000003558152,0.000021063639,0.000003022735,0.00001667627,0.99878603,0.000077027384,0.00005128146,0.00085577136],"study_design_scores_gemma":[0.0000131323095,0.00023315678,0.0035842762,0.0000045997035,0.000007766743,0.00015274239,0.000014381308,0.0006595954,0.99288976,0.000045031273,0.0023933135,0.00000217005],"about_ca_topic_score_codex":0.00042818865,"about_ca_topic_score_gemma":0.00057329907,"teacher_disagreement_score":0.00091873534,"about_ca_system_score_codex":0.0001869996,"about_ca_system_score_gemma":0.0001580911,"threshold_uncertainty_score":0.0030735135},"labels":[],"label_agreement":null},{"id":"W4394415952","doi":"10.6084/m9.figshare.20226944","title":"Additional file 1 of Identification and integrated analysis of lncRNAs and miRNAs in IPEC-J2 cells provide novel insight into the regulation of the innate immune response by PDCoV infection","year":2022,"lang":"en","type":"dataset","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Identification (biology); Innate immune system; microRNA; Biology; Immune system; Computational biology; Immunology; Genetics; Gene; Ecology","score_opus":0.010972784266249811,"score_gpt":0.22855184517899457,"score_spread":0.21757906091274476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394415952","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000053631495,0.000019278636,0.000050081144,0.000019524907,0.0000057474713,0.000009949984,0.99962914,0.000094382835,0.00011827754],"genre_scores_gemma":[0.0011192518,0.00007038123,0.000692165,0.000119123906,0.000010856108,0.00027597233,0.99674916,0.00019572281,0.00076732825],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99910444,0.00013763347,0.00013507131,0.00031889815,0.00016780905,0.00013617042],"domain_scores_gemma":[0.99313146,0.004886974,0.00045260767,0.00057278987,0.0006601327,0.00029602577],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0016994576,0.0018626048,0.0019939647,0.0025883191,0.0010304379,0.0026706923,0.0025212036,0.0023193306,0.47668287],"category_scores_gemma":[0.012232019,0.00075534655,0.0016237962,0.0041227406,0.0004984601,0.0014972363,0.0014577196,0.0017644386,0.12159675],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042653488,0.000083768355,0.0032226264,0.0077594593,0.00018550665,0.0000992279,0.00006844836,0.0011115421,0.0006981076,0.0009344496,0.98056364,0.004846664],"study_design_scores_gemma":[0.0036535475,0.0002010772,0.01746639,0.0025678268,0.0003827921,0.0003635954,0.00018573664,0.0015069598,0.001916503,0.0072810343,0.9643376,0.00013682556],"about_ca_topic_score_codex":0.007273106,"about_ca_topic_score_gemma":0.014641651,"teacher_disagreement_score":0.47668287,"about_ca_system_score_codex":0.0011898889,"about_ca_system_score_gemma":0.0025716813,"threshold_uncertainty_score":0.7464484},"labels":[],"label_agreement":null},{"id":"W4394454442","doi":"10.6084/m9.figshare.20226941","title":"Additional file 10 of Identification and integrated analysis of lncRNAs and miRNAs in IPEC-J2 cells provide novel insight into the regulation of the innate immune response by PDCoV infection","year":2022,"lang":"en","type":"dataset","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Identification (biology); Innate immune system; microRNA; Immune system; Computational biology; Biology; Immunology; Gene; Genetics","score_opus":0.011511146473074742,"score_gpt":0.2320936176617955,"score_spread":0.22058247118872076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394454442","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000045993238,0.00001857067,0.000047755395,0.000024956058,0.0000065057266,0.0000122347865,0.99960965,0.000112940514,0.00012134858],"genre_scores_gemma":[0.0010936997,0.00007236338,0.0007864457,0.00013473799,0.000011670307,0.0004053713,0.99634993,0.0002153955,0.0009304429],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99895656,0.00016502992,0.00017402695,0.00034608436,0.0002055847,0.00015278792],"domain_scores_gemma":[0.99173355,0.005851233,0.00055560394,0.0006350081,0.0008995583,0.00032496973],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0017559639,0.0019872484,0.0023781045,0.0030118292,0.0010789077,0.0028191148,0.0028052256,0.0027053622,0.51691407],"category_scores_gemma":[0.014071524,0.00085330504,0.0016718657,0.0045018597,0.0004807083,0.0015832139,0.0016748401,0.0017338614,0.1329312],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041082437,0.000090532245,0.0028925703,0.009143337,0.00017422611,0.00009783661,0.00006965466,0.00089850166,0.0005655007,0.0007929722,0.9796679,0.0051962445],"study_design_scores_gemma":[0.004103185,0.00018062488,0.017600486,0.003307087,0.00034151072,0.00028456852,0.00021048344,0.0013305336,0.0015795686,0.006885147,0.96402675,0.0001499721],"about_ca_topic_score_codex":0.008191462,"about_ca_topic_score_gemma":0.015502252,"teacher_disagreement_score":0.51691407,"about_ca_system_score_codex":0.0012499951,"about_ca_system_score_gemma":0.0028541298,"threshold_uncertainty_score":0.68906343},"labels":[],"label_agreement":null},{"id":"W4394458466","doi":"10.6084/m9.figshare.22622332","title":"Additional file 2 of Rare predicted loss-of-function variants of type I IFN immunity genes are associated with life-threatening COVID-19","year":2023,"lang":"en","type":"dataset","venue":"Open MIND","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Coronavirus disease 2019 (COVID-19); Gene; Loss function; Biology; Genetics; Immunity; Function (biology); Virology; Immune system; Medicine; Phenotype; Disease; Infectious disease (medical specialty)","score_opus":0.046622541428267515,"score_gpt":0.2917757620115218,"score_spread":0.24515322058325426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394458466","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00032836315,0.000030509545,0.0003306237,0.000121241115,0.000029863564,0.00009870567,0.99826545,0.00021077642,0.0005844683],"genre_scores_gemma":[0.01696002,0.00026945534,0.0061361445,0.0013892367,0.00023693306,0.0030750937,0.958515,0.001437071,0.01198107],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990522,0.00017498527,0.00018839326,0.0002878078,0.0001557156,0.00014090046],"domain_scores_gemma":[0.9807551,0.015047739,0.001171918,0.0011332531,0.0013840586,0.0005078876],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0018981239,0.0015383367,0.0018688741,0.0021693294,0.0012220313,0.0021085788,0.0024302793,0.0018467094,0.86805874],"category_scores_gemma":[0.032249525,0.0007770012,0.001673455,0.0034480223,0.00037113766,0.0020839453,0.0011040905,0.0011958572,0.12801512],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010599737,0.0001505875,0.009482538,0.005979444,0.00020939228,0.00038645626,0.0001264316,0.00076607784,0.00024203127,0.0012928285,0.9665159,0.0137883425],"study_design_scores_gemma":[0.023452863,0.0009881963,0.102625534,0.01071424,0.001121083,0.0036680123,0.0011167666,0.0070404485,0.002154978,0.034111496,0.81246406,0.00054225686],"about_ca_topic_score_codex":0.009495027,"about_ca_topic_score_gemma":0.014970743,"teacher_disagreement_score":0.86805874,"about_ca_system_score_codex":0.00093745487,"about_ca_system_score_gemma":0.001989508,"threshold_uncertainty_score":0.18819821},"labels":[],"label_agreement":null},{"id":"W4394462511","doi":"10.6084/m9.figshare.20226947","title":"Additional file 2 of Identification and integrated analysis of lncRNAs and miRNAs in IPEC-J2 cells provide novel insight into the regulation of the innate immune response by PDCoV infection","year":2022,"lang":"en","type":"dataset","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Identification (biology); Innate immune system; microRNA; Biology; Computational biology; Immune system; Immunology; Genetics; Gene; Ecology","score_opus":0.010621461947931517,"score_gpt":0.22809663476826014,"score_spread":0.21747517282032863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394462511","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000049214643,0.00002011566,0.000043448545,0.000021819587,0.000006106503,0.0000103041,0.99964225,0.00008637932,0.00012035708],"genre_scores_gemma":[0.0011185675,0.00007165081,0.0006435008,0.00012525331,0.000011639499,0.0002948278,0.9967218,0.00018454921,0.0008281143],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989973,0.0001512833,0.00016015407,0.00035124342,0.00019010462,0.000150019],"domain_scores_gemma":[0.992431,0.0053719673,0.0005038545,0.0006062811,0.00077554735,0.00031140386],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0017732523,0.0018471761,0.002088478,0.0027343805,0.0010415462,0.0028396456,0.002525128,0.0024661159,0.47845381],"category_scores_gemma":[0.013918462,0.00074540684,0.0017421196,0.004274838,0.000519674,0.0015578795,0.0015488657,0.0017978366,0.114562385],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043333834,0.00007860367,0.0030296154,0.008474471,0.00018152069,0.00009617121,0.00006685057,0.0009866592,0.0005629202,0.00091373315,0.98058313,0.0045930147],"study_design_scores_gemma":[0.0036188134,0.0001703273,0.015410782,0.0028857833,0.00035622536,0.0003068334,0.00018374492,0.0012468242,0.0014924104,0.006808572,0.967393,0.00012681732],"about_ca_topic_score_codex":0.007637706,"about_ca_topic_score_gemma":0.014903542,"teacher_disagreement_score":0.47845381,"about_ca_system_score_codex":0.0011966622,"about_ca_system_score_gemma":0.0026123195,"threshold_uncertainty_score":0.74392235},"labels":[],"label_agreement":null},{"id":"W4394549948","doi":"10.6084/m9.figshare.20226950","title":"Additional file 3 of Identification and integrated analysis of lncRNAs and miRNAs in IPEC-J2 cells provide novel insight into the regulation of the innate immune response by PDCoV infection","year":2022,"lang":"en","type":"dataset","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Innate immune system; Identification (biology); microRNA; Biology; Immune system; Viral infection; Computational biology; Virology; Immunology; Gene; Genetics; Virus","score_opus":0.010793235097031673,"score_gpt":0.22822779580247454,"score_spread":0.21743456070544287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394549948","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000056404726,0.00002401095,0.000036368587,0.000022948452,0.000005926215,0.000009616188,0.99965346,0.000074147356,0.00011719185],"genre_scores_gemma":[0.0012208958,0.00007773007,0.000506654,0.00012175046,0.000011297503,0.0002959037,0.9968346,0.00012557356,0.00080549385],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.999146,0.00012644126,0.00013928342,0.00029009202,0.00016412974,0.00013405747],"domain_scores_gemma":[0.99372226,0.0044517443,0.00044581768,0.00046482543,0.00064212433,0.00027325389],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013755889,0.0017491082,0.0021325855,0.0023948366,0.0009271645,0.0025774387,0.002338659,0.0023432493,0.42569053],"category_scores_gemma":[0.011910744,0.0006446633,0.0017421641,0.0039344393,0.0004527011,0.0013214175,0.0015135846,0.0015916683,0.10058091],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051479886,0.00007696056,0.003482435,0.009744276,0.00021202269,0.00010266562,0.000066262204,0.00095791713,0.00060048775,0.00077147066,0.97856766,0.0049029877],"study_design_scores_gemma":[0.0045431643,0.000200982,0.020627573,0.0034483732,0.0004400388,0.00032686503,0.00020069585,0.0013556632,0.0015784868,0.0059837284,0.9611594,0.00013492085],"about_ca_topic_score_codex":0.0075052655,"about_ca_topic_score_gemma":0.014725853,"teacher_disagreement_score":0.42569053,"about_ca_system_score_codex":0.0010878387,"about_ca_system_score_gemma":0.0022628887,"threshold_uncertainty_score":0.81918275},"labels":[],"label_agreement":null},{"id":"W4394695782","doi":"10.1101/2024.04.04.588079","title":"Deoxyuridine-rich cytoplasmic DNA antagonizes STING-dependent innate immune responses and sensitizes resistant tumors to anti-PD-L1 therapy","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network; University of Toronto","funders":"National Institutes of Health; University of South Alabama","keywords":"Sting; Innate immune system; Cancer research; Deoxyuridine; DNA; Immune system; CRISPR; Medicine; Immunology; Biology; Gene; Genetics; Physics","score_opus":0.012681713710681572,"score_gpt":0.23086249045870416,"score_spread":0.21818077674802258,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394695782","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939507,0.0015172248,0.0026255099,0.00008305036,0.000029201727,0.000037125883,0.00025428587,0.00020051793,0.001302384],"genre_scores_gemma":[0.99678445,0.00039384293,0.0014475145,0.000031317297,0.000006317516,0.000020970527,0.00019805905,0.000016202093,0.0011012898],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987316,0.000024051662,0.000013945745,0.000026308182,0.00003604778,0.000026515507],"domain_scores_gemma":[0.9998723,0.000018409335,0.000048557304,0.000023244409,0.000008629129,0.000028955319],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011717013,0.0002974158,0.0003271405,0.00028605224,0.00008818999,0.00024337553,0.00020636126,0.00025780944,0.0011531767],"category_scores_gemma":[0.00009440669,0.0001425264,0.0001709717,0.00012637729,0.00024354357,0.00014776517,0.00015295447,0.0006244694,0.0002823763],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007939425,0.00003137812,0.00009981546,0.000021973185,0.000004013837,0.000017847862,0.0000062651707,0.00009701489,0.9982357,0.000079315694,0.000027752692,0.0012994019],"study_design_scores_gemma":[0.000022629005,0.000793453,0.0010272579,0.000005458976,0.000011169016,0.00021588537,0.000009017099,0.00086842524,0.9954562,0.00002642147,0.0015611638,0.0000028805873],"about_ca_topic_score_codex":0.00018849006,"about_ca_topic_score_gemma":0.000342369,"teacher_disagreement_score":0.0011531767,"about_ca_system_score_codex":0.00018840634,"about_ca_system_score_gemma":0.0001341538,"threshold_uncertainty_score":0.0038577318},"labels":[],"label_agreement":null},{"id":"W4394722554","doi":"10.3389/fcvm.2024.1357343","title":"Interferons and interferon-related pathways in heart disease","year":2024,"lang":"en","type":"article","venue":"Frontiers in Cardiovascular Medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"Banting and Best Diabetes Centre, University of Toronto; Novo Nordisk; University of Toronto; Heart and Stroke Foundation of Canada","keywords":"Interferon; Stimulator of interferon genes; Signal transduction; Immunology; Transcription factor; Interferon type I; Pathogenesis; Biology; Receptor; Disease; Sting; Interferon regulatory factors; Gene; Medicine; Cell biology; Innate immune system; Immune system; Genetics; Internal medicine","score_opus":0.010102926075230086,"score_gpt":0.22699873943072596,"score_spread":0.21689581335549588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394722554","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00045197477,0.9950747,0.0002804156,0.000948021,0.0011590421,0.000003974816,0.000010432264,0.000006638541,0.002064712],"genre_scores_gemma":[0.003940412,0.9902192,0.00032149378,0.0008539792,0.0017880978,0.0000074289514,0.000027291962,0.0000022352606,0.0028399876],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998553,0.00004018979,0.000017193692,0.000024029865,0.000042217907,0.000021176633],"domain_scores_gemma":[0.9998771,0.000043424534,0.000024199006,0.0000035371143,0.00003166689,0.00002000034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037450614,0.0005307553,0.0006103392,0.0005996533,0.00024371292,0.00071785704,0.0003239457,0.000737806,0.0018907584],"category_scores_gemma":[0.00029143062,0.00010336594,0.00021530633,0.00074108486,0.00045306367,0.00082104787,0.00044484256,0.0013532193,0.0009494007],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022936973,0.00009574646,0.0012273864,0.008482631,0.00009103489,0.0009923179,0.00035436233,0.00082697417,0.014808722,0.023150105,0.08711655,0.8626249],"study_design_scores_gemma":[0.00001288269,0.000110011155,0.0026153151,0.0020160577,0.000040723775,0.0017340129,0.00017990703,0.00014444278,0.00095271977,0.011828797,0.98035014,0.000015014638],"about_ca_topic_score_codex":0.00044602357,"about_ca_topic_score_gemma":0.00071775576,"teacher_disagreement_score":0.0018907584,"about_ca_system_score_codex":0.0005097747,"about_ca_system_score_gemma":0.00059387286,"threshold_uncertainty_score":0.0063251853},"labels":[],"label_agreement":null},{"id":"W4394733947","doi":"10.1016/j.virusres.2024.199368","title":"Viral deubiquitinating proteases and the promising strategies of their inhibition","year":2024,"lang":"en","type":"article","venue":"Virus Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"European Commission; Horizon 2020; HORIZON EUROPE Framework Programme; University of Manitoba","keywords":"Deubiquitinating enzyme; Proteases; Ubiquitin; Biology; Innate immune system; Cell biology; Viral replication; Immune system; Enzyme; Biochemistry; Virus; Virology; Immunology; Gene","score_opus":0.0488975071450755,"score_gpt":0.3582607874440098,"score_spread":0.3093632802989343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394733947","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.018631449,0.95739514,0.012624448,0.0016455423,0.000537426,0.00012083877,0.00023205123,0.000113545124,0.008699595],"genre_scores_gemma":[0.11808661,0.86262023,0.009481928,0.0011209929,0.00039390393,0.00019953,0.00054286316,0.000026089705,0.0075279223],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99983656,0.00003424374,0.00001106823,0.000027285509,0.000055502354,0.000035264005],"domain_scores_gemma":[0.99993503,0.000017883205,0.000015529702,0.000005087875,0.000015781603,0.000010807105],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005604401,0.00063784287,0.0005338829,0.0007682029,0.0002163606,0.0007078309,0.0003906655,0.00061885547,0.0015823616],"category_scores_gemma":[0.00022987177,0.00022528184,0.00049717986,0.00045176773,0.0003257655,0.0006689815,0.00038709643,0.0016072294,0.0008776509],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00065216963,0.00070331385,0.00066988927,0.00498414,0.00021538929,0.00062858354,0.00018619743,0.0026350198,0.2895019,0.022912594,0.011803062,0.6651078],"study_design_scores_gemma":[0.0002015392,0.0026822698,0.0034745093,0.000724731,0.00024062864,0.002167354,0.000117225165,0.0025340493,0.19758928,0.009987957,0.78018916,0.00009131151],"about_ca_topic_score_codex":0.0003442081,"about_ca_topic_score_gemma":0.0008158696,"teacher_disagreement_score":0.0015823616,"about_ca_system_score_codex":0.0004982981,"about_ca_system_score_gemma":0.00028556286,"threshold_uncertainty_score":0.0052934885},"labels":[],"label_agreement":null},{"id":"W4394757817","doi":"10.3389/fimmu.2024.1395035","title":"MNDA, a PYHIN factor involved in transcriptional regulation and apoptosis control in leukocytes","year":2024,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Intégré Universitaire de Santé et de Services Sociaux du Centre-Sud-de-l'Île-de-Montréal; Centre Intégré Universitaire de Santé et de Services Sociaux du Saguenay–Lac-Saint-Jean","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Inflammation; Immunology; Immune system; Innate immune system; Cell biology; Myeloid; Transcription factor; Pattern recognition receptor; Proinflammatory cytokine; Acquired immune system; Gene; Genetics","score_opus":0.009478275076732936,"score_gpt":0.22193954482052544,"score_spread":0.2124612697437925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394757817","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87145376,0.086226866,0.03607708,0.00042270168,0.0002834066,0.00012791569,0.0008787145,0.00035714093,0.004172497],"genre_scores_gemma":[0.976938,0.009327787,0.008141227,0.000108308275,0.000082482446,0.00004443458,0.0007215427,0.000021874503,0.0046144044],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980444,0.000032460655,0.0000139763,0.0000625371,0.000054674565,0.00003188358],"domain_scores_gemma":[0.9998808,0.000018331006,0.000036809306,0.000015000232,0.000015334792,0.000033713462],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017422841,0.00031644627,0.00021994728,0.0002738548,0.00031303035,0.00048660339,0.00018484978,0.0002747893,0.0007326949],"category_scores_gemma":[0.00019820612,0.00010148157,0.00026817253,0.00023901318,0.00037886915,0.00036062856,0.0003928718,0.00044765347,0.0002487345],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012743763,0.000011027581,0.00093045365,0.00007814817,0.000005838931,0.00016749364,0.00003956182,0.00007702338,0.98920083,0.00058736023,0.0000655643,0.00870911],"study_design_scores_gemma":[0.000042538588,0.00073321635,0.037052203,0.000045506426,0.00004631598,0.0029942829,0.0001931766,0.0018825904,0.9112513,0.0013317959,0.044393983,0.000032972875],"about_ca_topic_score_codex":0.00029468333,"about_ca_topic_score_gemma":0.0003164043,"teacher_disagreement_score":0.0007326949,"about_ca_system_score_codex":0.00034156913,"about_ca_system_score_gemma":0.0002827203,"threshold_uncertainty_score":0.002478242},"labels":[],"label_agreement":null},{"id":"W4394852369","doi":"10.14740/cr1613","title":"Increased Cyclic Guanosine Monophosphate and Interleukin-1Beta Is Activated by Mitochondrial Dysfunction and Associated With Heart Failure in Atrial Fibrillation Patients","year":2024,"lang":"en","type":"article","venue":"Cardiology Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Natural Science Foundation of China; Natural Science Foundation of Xinjiang Province","keywords":"Cyclic guanosine monophosphate; Cardiology; Medicine; Internal medicine; Atrial fibrillation; Heart failure; Guanosine; Biochemistry; Chemistry; Nitric oxide","score_opus":0.015386985731364362,"score_gpt":0.28105059618652267,"score_spread":0.2656636104551583,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394852369","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989281,0.00075788196,0.0000693483,0.000024782921,0.0000050936064,0.000004135173,0.0000683037,0.0000024759968,0.00013981566],"genre_scores_gemma":[0.99956745,0.00015418419,0.000058568396,0.00001949397,0.000016100475,0.0000058073247,0.00010556849,4.7670426e-7,0.000072492534],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99986637,0.000026704869,0.000018618697,0.000034638844,0.000026054104,0.000027626033],"domain_scores_gemma":[0.99956506,0.000051612868,0.00026085018,0.000015261885,0.00003419777,0.00007300862],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019127058,0.00020631604,0.00028471276,0.0002727791,0.000173661,0.00023707902,0.00009971481,0.00023972207,0.0008761825],"category_scores_gemma":[0.00047909553,0.00008248458,0.00016953971,0.00021741586,0.00012632222,0.0001353831,0.0001268583,0.00028381273,0.00010386927],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014058291,0.000089016896,0.98421174,0.000037951355,0.000056191322,0.00042371912,0.00007569998,0.000044409422,0.008598448,0.00001480528,0.00007815764,0.0049640974],"study_design_scores_gemma":[0.000017655897,0.00039632551,0.9975599,0.0000070760884,0.000036642392,0.00109882,0.000051105795,0.000120052886,0.00052411173,0.000022289369,0.00016298363,0.0000029542175],"about_ca_topic_score_codex":0.00026997985,"about_ca_topic_score_gemma":0.0004432193,"teacher_disagreement_score":0.0008761825,"about_ca_system_score_codex":0.00013693394,"about_ca_system_score_gemma":0.0001038356,"threshold_uncertainty_score":0.002931118},"labels":[],"label_agreement":null},{"id":"W4394952550","doi":"10.2139/ssrn.4799775","title":"APOE3-R136S Mutation Confers Resilience Against Tau Pathology via cGAS-STING-IFN Inhibition","year":2024,"lang":"en","type":"preprint","venue":"SSRN Electronic Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Sting; Mutation; Resilience (materials science); Inflammation; Biology; Medicine; Genetics; Immunology; Gene; Physics","score_opus":0.007757504466381606,"score_gpt":0.24945206522130817,"score_spread":0.24169456075492657,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394952550","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952237,0.00036210965,0.0012722374,0.00021999872,0.00013164479,0.000023179846,0.0006647766,0.00017965453,0.0019226604],"genre_scores_gemma":[0.9953785,0.0001913779,0.0007232635,0.000102955404,0.000020866968,0.00002423112,0.00035270012,0.00004561992,0.0031604727],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984956,0.00001794925,0.000015958018,0.000033957032,0.000032939035,0.00004967204],"domain_scores_gemma":[0.99986315,0.00001866018,0.000039784394,0.000024819012,0.00000942338,0.00004413868],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015866678,0.0004096524,0.00030886443,0.00020298986,0.00013940896,0.00032871775,0.00024657467,0.00052215316,0.003958711],"category_scores_gemma":[0.000171087,0.00014066389,0.0004460778,0.00011982517,0.00037684798,0.00018838081,0.00024352103,0.0010495001,0.0009054629],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012671725,0.00009797349,0.00039884972,0.00002811089,0.00002119755,0.00024883394,0.000016434587,0.00008674144,0.9946779,0.00021127771,0.00020891445,0.002736577],"study_design_scores_gemma":[0.00023239572,0.0014726298,0.009162728,0.000027057316,0.00011570252,0.0017992829,0.00008174164,0.001695268,0.9786928,0.00062279654,0.006074833,0.000022793412],"about_ca_topic_score_codex":0.00038956484,"about_ca_topic_score_gemma":0.0005150536,"teacher_disagreement_score":0.003958711,"about_ca_system_score_codex":0.00020650693,"about_ca_system_score_gemma":0.00021298317,"threshold_uncertainty_score":0.013243198},"labels":[],"label_agreement":null},{"id":"W4395009911","doi":"10.3390/cancers16081600","title":"Signaling by Type I Interferons in Immune Cells: Disease Consequences","year":2024,"lang":"en","type":"article","venue":"Cancers","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto; Canada Research Chairs; University Health Network","funders":"National Cancer Institute; National Institutes of Health","keywords":"Immune system; Tumor microenvironment; Cancer research; Interferon; Signal transduction; Tumor progression; Biology; Cancer; Immunology; Cancer cell; Cell biology; Genetics","score_opus":0.013769483338338533,"score_gpt":0.2641355772435333,"score_spread":0.25036609390519476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395009911","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008749241,0.98478556,0.0014457975,0.0011790716,0.00086915336,0.000004900695,0.000027351196,0.000018714793,0.0029201652],"genre_scores_gemma":[0.033349037,0.96151733,0.0008164715,0.00066922954,0.0010158895,0.000008877256,0.000035357196,0.0000053244817,0.002582568],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9999136,0.000023126935,0.000009422184,0.000013051102,0.00002701431,0.000013824759],"domain_scores_gemma":[0.9999442,0.000021436888,0.000013124919,0.0000023607254,0.000010208867,0.000008619747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023753718,0.00030964694,0.00035469444,0.00025108145,0.0001651725,0.0005806122,0.0001993184,0.0004536391,0.00067837955],"category_scores_gemma":[0.00014651327,0.00006882894,0.00017311807,0.00026610694,0.00029019572,0.0004651082,0.00021344403,0.00056328194,0.00040901752],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045671433,0.00007415952,0.0027715792,0.0060272897,0.00010350413,0.001871279,0.0003794433,0.0010014129,0.24957871,0.02122985,0.015509047,0.700997],"study_design_scores_gemma":[0.00002076804,0.00058739784,0.007368833,0.0016324826,0.0001679242,0.009192283,0.00045830436,0.0005069857,0.049739666,0.015876096,0.91441387,0.000035492692],"about_ca_topic_score_codex":0.00007970181,"about_ca_topic_score_gemma":0.00015972265,"teacher_disagreement_score":0.00067837955,"about_ca_system_score_codex":0.00023535988,"about_ca_system_score_gemma":0.00019355243,"threshold_uncertainty_score":0.0022694468},"labels":[],"label_agreement":null},{"id":"W4395020725","doi":"10.1016/j.celrep.2024.114122","title":"HSV-1 employs UL56 to antagonize expression and function of cGAMP channels","year":2024,"lang":"en","type":"article","venue":"Cell Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; European Research Council; National Institutes of Health; John Fell Fund, University of Oxford; National Institute for Health and Care Research; Chinese Academy of Medical Sciences; Kay Kendall Leukaemia Fund; Wellcome Trust; U.S. Environmental Protection Agency","keywords":"Expression (computer science); Function (biology); Biology; Cell biology; Computational biology; Communication; Computer science; Psychology","score_opus":0.010894573547481218,"score_gpt":0.23989771755945252,"score_spread":0.2290031440119713,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395020725","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9914894,0.002097959,0.0026009902,0.00019761265,0.00010129999,0.000046471578,0.0005296578,0.00010103515,0.0028355569],"genre_scores_gemma":[0.9943962,0.0006053886,0.002574648,0.000054373064,0.000009193725,0.00004131541,0.00041307468,0.000026192287,0.001879591],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997416,0.00004388498,0.000054289205,0.000055357956,0.000042018473,0.00006277708],"domain_scores_gemma":[0.9998547,0.000037900285,0.0000399039,0.000034970028,0.000008161239,0.000024413524],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020662925,0.0003994935,0.00037029394,0.00016613792,0.00017669915,0.0005246836,0.00036918305,0.000334533,0.0014333568],"category_scores_gemma":[0.0002107536,0.000156755,0.0003233964,0.00015451727,0.00037894212,0.00033367268,0.00035474348,0.00054148596,0.0004467951],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017457093,0.000053062446,0.00022381153,0.000042051255,0.0000071730415,0.000051331248,0.000021857719,0.00016742865,0.99719137,0.00059985986,0.000070207745,0.0013973394],"study_design_scores_gemma":[0.000015658385,0.00016298884,0.00064554054,0.0000050954736,0.000007963744,0.00018880225,0.000018934328,0.000635157,0.99556834,0.000038805432,0.0027091203,0.0000036209656],"about_ca_topic_score_codex":0.00071086036,"about_ca_topic_score_gemma":0.0006419916,"teacher_disagreement_score":0.0014333568,"about_ca_system_score_codex":0.00072849804,"about_ca_system_score_gemma":0.00025137558,"threshold_uncertainty_score":0.0052856803},"labels":[],"label_agreement":null},{"id":"W4395074760","doi":"10.1002/ijc.34954","title":"When <scp>DNA</scp> damage responses meet tumor immunity: From mechanism to therapeutic opportunity","year":2024,"lang":"en","type":"article","venue":"International Journal of Cancer","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Wenzhou Municipal Science and Technology Bureau; Wenzhou Medical University","keywords":"Immunity; Mechanism (biology); Immunology; DNA; Medicine; Biology; Immune system; Genetics","score_opus":0.029015997912315405,"score_gpt":0.3213146584747289,"score_spread":0.2922986605624135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395074760","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1717179,0.6301416,0.06555833,0.047962725,0.005077759,0.0004182076,0.00060864456,0.00095272466,0.07756209],"genre_scores_gemma":[0.7253443,0.21858296,0.017543284,0.009555246,0.0027401666,0.00029139826,0.00039589757,0.00013168275,0.025415117],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9995189,0.00015287509,0.000032254196,0.00006406773,0.00014118761,0.000090690446],"domain_scores_gemma":[0.99968064,0.00010053451,0.00008746518,0.000027906939,0.000055942226,0.00004752774],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00086473185,0.00034770728,0.0008165634,0.0004391387,0.00033464655,0.001942243,0.0003031566,0.0016413571,0.0032110722],"category_scores_gemma":[0.00054888247,0.00020439443,0.00034310453,0.00026431217,0.0008792136,0.0021355595,0.0005713696,0.0017769557,0.0011008122],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007020767,0.00018905177,0.0024243093,0.004554486,0.00013916346,0.0027844799,0.00053917995,0.0014060629,0.6816349,0.058500562,0.012856924,0.23426887],"study_design_scores_gemma":[0.00011329765,0.0016375578,0.005998755,0.001161915,0.00017301533,0.008175647,0.0012848208,0.0021503747,0.4301327,0.05055528,0.49854803,0.000068559166],"about_ca_topic_score_codex":0.00010207593,"about_ca_topic_score_gemma":0.0002554208,"teacher_disagreement_score":0.0032110722,"about_ca_system_score_codex":0.00072402495,"about_ca_system_score_gemma":0.00062324986,"threshold_uncertainty_score":0.010742128},"labels":[],"label_agreement":null},{"id":"W4395961521","doi":"10.1101/2024.04.25.591140","title":"<i>APOE3</i> - <i>R136S</i> mutation confers resilience against tau pathology via cGAS-STING-IFN inhibition","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Sting; Mutation; Medicine; Chemistry; Biology; Genetics; Gene; Physics","score_opus":0.009106787500342085,"score_gpt":0.21788732106606748,"score_spread":0.2087805335657254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395961521","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99240535,0.00042447596,0.002307135,0.000430523,0.00009165616,0.000050543058,0.00068644644,0.0002724531,0.0033314102],"genre_scores_gemma":[0.99062914,0.00026746804,0.0019800577,0.00016411794,0.000028359591,0.000033025764,0.00057768746,0.000060084567,0.006260051],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984694,0.000023450999,0.000024004652,0.000025668394,0.000046929315,0.000033036977],"domain_scores_gemma":[0.99987483,0.0000134914735,0.000048719634,0.000017291983,0.0000099939925,0.00003555283],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014630442,0.00035605484,0.00023588222,0.00019098519,0.00020602961,0.00022739173,0.0003353829,0.00043298156,0.003709279],"category_scores_gemma":[0.00009108642,0.00013384587,0.00030317451,0.00007554349,0.00029198406,0.00012969314,0.0002025873,0.0006135789,0.00075531675],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013324826,0.000031484447,0.00015657271,0.000013651689,0.0000040119776,0.00009032122,0.000005471385,0.000021489373,0.9986634,0.00009113229,0.00014056452,0.0006485483],"study_design_scores_gemma":[0.000056507393,0.0004911068,0.00559436,0.000010576707,0.000022462817,0.0010944017,0.00003751199,0.00083417277,0.9867198,0.00011244054,0.005016651,0.000009971009],"about_ca_topic_score_codex":0.0010627436,"about_ca_topic_score_gemma":0.001732232,"teacher_disagreement_score":0.003709279,"about_ca_system_score_codex":0.00030271357,"about_ca_system_score_gemma":0.00026996003,"threshold_uncertainty_score":0.012408793},"labels":[],"label_agreement":null},{"id":"W4396508730","doi":"10.1007/s10914-024-09715-6","title":"Characterizing patterns of selection pressure on mammalian antiviral immune response","year":2024,"lang":"en","type":"article","venue":"Journal of Mammalian Evolution","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Immune system; Human genetics; Selection (genetic algorithm); Biology; Evolutionary biology; Computational biology; Genetics; Computer science; Gene; Artificial intelligence","score_opus":0.010150112195572492,"score_gpt":0.24949577697555042,"score_spread":0.23934566477997793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396508730","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990471,0.00006225471,0.00028940736,0.0000143410625,0.0000010461366,0.0000016056626,0.00003334168,0.000004121216,0.0005467483],"genre_scores_gemma":[0.9994512,0.000040536543,0.00024221282,0.00002741357,0.0000035792057,0.0000045209813,0.00006399586,0.0000064691676,0.00015997127],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997658,0.000080546066,0.000012792776,0.000056211564,0.00004373221,0.0000409208],"domain_scores_gemma":[0.99939406,0.0002827324,0.00013974527,0.000059972812,0.00005795693,0.00006563387],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048708371,0.00013176377,0.000243353,0.00057280314,0.00021564243,0.0005230732,0.00024353384,0.0002701869,0.0013665882],"category_scores_gemma":[0.0007657103,0.00013182937,0.00014713572,0.00036967176,0.00036275448,0.0002590975,0.00037290386,0.00049947907,0.00012767709],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042378248,0.000046884405,0.110140204,0.000030213569,0.00009640462,0.00005898246,0.00018968184,0.00070753077,0.873662,0.00092777226,0.00008518987,0.013631401],"study_design_scores_gemma":[0.000017796221,0.0003101682,0.95454985,0.000010061244,0.00005720832,0.00034980968,0.0003569881,0.0036723092,0.03904719,0.0006287073,0.0009852492,0.000014687883],"about_ca_topic_score_codex":0.00029467884,"about_ca_topic_score_gemma":0.00084597024,"teacher_disagreement_score":0.0013665882,"about_ca_system_score_codex":0.0002602368,"about_ca_system_score_gemma":0.00011494795,"threshold_uncertainty_score":0.0045716763},"labels":[],"label_agreement":null},{"id":"W4396530381","doi":"10.1172/jci176474","title":"Induction of antiviral interferon-stimulated genes by neuronal STING promotes the resolution of pain in mice","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotchkiss Brain Institute; Alberta Children's Hospital; University of Calgary","funders":"Canadian Institutes of Health Research; Alberta Children's Hospital Research Institute; Crohn's and Colitis Canada; Agence Nationale de la Recherche; Canadian Association of Gastroenterology","keywords":"Sting; Stimulator of interferon genes; Nociceptor; Inflammation; Dorsal root ganglion; Hyperalgesia; Nociception; Interferon; Cell biology; Medicine; Immunology; Neuroscience; Biology; Receptor; Spinal cord; Innate immune system; Immune system; Internal medicine","score_opus":0.06284313801702422,"score_gpt":0.3483504577478099,"score_spread":0.2855073197307857,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396530381","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926649,0.0010202762,0.0029983355,0.0002851442,0.000055417182,0.00006011005,0.00079554203,0.0002667796,0.0018534871],"genre_scores_gemma":[0.9903053,0.0007325188,0.003741825,0.0001819436,0.000022356608,0.00012037475,0.0006866329,0.00007760795,0.0041315677],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996259,0.00006867517,0.00004608083,0.00007857886,0.00006823905,0.000112403904],"domain_scores_gemma":[0.9996394,0.0000417998,0.00013640456,0.000038851726,0.000018474191,0.00012508844],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034207423,0.00058563426,0.0003303618,0.0008754911,0.00022113536,0.00044437486,0.0003481441,0.00065679394,0.0023246517],"category_scores_gemma":[0.00019360006,0.00033749276,0.0004482199,0.00025510782,0.0006618905,0.0003914211,0.0002648558,0.0017807209,0.0005010821],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006134679,0.00018701151,0.0003339645,0.000038889862,0.000008705427,0.00006718631,0.000033359032,0.00008165216,0.99685764,0.00021857773,0.000066487846,0.001493027],"study_design_scores_gemma":[0.00019947458,0.0018998561,0.0075049954,0.000044345124,0.000038686252,0.00045599721,0.00009450491,0.0022358242,0.9850152,0.00026045757,0.002239655,0.00001110303],"about_ca_topic_score_codex":0.00040084828,"about_ca_topic_score_gemma":0.00076459354,"teacher_disagreement_score":0.0023246517,"about_ca_system_score_codex":0.00054074835,"about_ca_system_score_gemma":0.00030642212,"threshold_uncertainty_score":0.0077766776},"labels":[],"label_agreement":null},{"id":"W4396674409","doi":"10.3390/v16050734","title":"The Antiviral Activity of Interferon-Induced Transmembrane Proteins and Virus Evasion Strategies","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Fonds de recherche du Québec – Nature et technologies; Canadian Institutes of Health Research; Pfizer","keywords":"Interferon; Virus; Transmembrane protein; Virology; Biology; Glycoprotein; Context (archaeology); Viral entry; Viral replication; Genetics; Receptor","score_opus":0.026817755682010606,"score_gpt":0.2898407163929635,"score_spread":0.2630229607109529,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396674409","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.028524874,0.95465815,0.0051402096,0.0011499582,0.00028230876,0.000019252673,0.00004296272,0.00003885299,0.010143391],"genre_scores_gemma":[0.18778162,0.8006736,0.0041565793,0.00075451995,0.00066972786,0.00003970514,0.00008276375,0.000009231593,0.005832233],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989116,0.000024386027,0.000009717944,0.000018986606,0.00003149812,0.000024210427],"domain_scores_gemma":[0.99996054,0.000010132166,0.00001318294,0.0000016308132,0.000007882711,0.0000066427397],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022354037,0.000271646,0.00030082164,0.00035330973,0.00016784629,0.00053691777,0.00020092311,0.0004494718,0.00050739467],"category_scores_gemma":[0.00011892023,0.00007583668,0.00020638097,0.00018797423,0.00027965396,0.000579285,0.0002613931,0.00050346635,0.00023696694],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002631411,0.00007084157,0.002480442,0.00464128,0.00007108635,0.0013685778,0.00035055628,0.0012615556,0.44724327,0.05213394,0.005015847,0.48509943],"study_design_scores_gemma":[0.000030671952,0.00089424587,0.010603994,0.0015189076,0.00016355778,0.010387868,0.0006760913,0.0023492503,0.19772625,0.023896737,0.75169283,0.000059559017],"about_ca_topic_score_codex":0.00017279368,"about_ca_topic_score_gemma":0.00022016991,"teacher_disagreement_score":0.00053691777,"about_ca_system_score_codex":0.00043656278,"about_ca_system_score_gemma":0.00023530493,"threshold_uncertainty_score":0.0031674504},"labels":[],"label_agreement":null},{"id":"W4396858505","doi":"10.1080/00207454.2024.2352025","title":"C-176 reduces inflammation-induced pain by blocking the cGAS-STING pathway in microglia","year":2024,"lang":"en","type":"article","venue":"International Journal of Neuroscience","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Science North","funders":"National Natural Science Foundation of China","keywords":"Microglia; Inflammation; Sting; Medicine; Allodynia; Stimulation; Nociception; Pharmacology; Immunology; Hyperalgesia; Internal medicine; Receptor","score_opus":0.01890693837687783,"score_gpt":0.2810852329546227,"score_spread":0.26217829457774483,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396858505","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97541034,0.015093753,0.002743523,0.00053813227,0.00031198928,0.00019493669,0.0005686504,0.00031014733,0.0048285103],"genre_scores_gemma":[0.9846784,0.008187223,0.0028316895,0.0002764895,0.00012837397,0.00021524624,0.0005525525,0.000018929184,0.0031110737],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998535,0.000018710374,0.000014183234,0.000014359292,0.00005201839,0.000047306945],"domain_scores_gemma":[0.9999324,0.000005847917,0.000021877831,0.0000055877517,0.000012507862,0.000021691745],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015159903,0.0007257675,0.0004067371,0.0005077554,0.00028564566,0.00022104473,0.0003381351,0.00045688977,0.0029447777],"category_scores_gemma":[0.00014959785,0.00015135147,0.0005024169,0.0002645416,0.00038803002,0.0002998315,0.0001351294,0.00094690645,0.00044847783],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012682066,0.0004830983,0.00013543743,0.00035051687,0.000025705785,0.00010776163,0.000023579889,0.0001577511,0.99118876,0.0002046566,0.00030452188,0.0057499735],"study_design_scores_gemma":[0.0005833477,0.007491369,0.004981942,0.00007191734,0.00011566235,0.00044760038,0.00006214318,0.0013737791,0.97901195,0.00017566807,0.0056667556,0.000017905533],"about_ca_topic_score_codex":0.0007024431,"about_ca_topic_score_gemma":0.0012895562,"teacher_disagreement_score":0.0029447777,"about_ca_system_score_codex":0.000315516,"about_ca_system_score_gemma":0.0006213561,"threshold_uncertainty_score":0.009851217},"labels":[],"label_agreement":null},{"id":"W4396943617","doi":"10.1126/sciadv.adj5428","title":"N-MYC impairs innate immune signaling in high-grade serous ovarian carcinoma","year":2024,"lang":"en","type":"article","venue":"Science Advances","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria; University of British Columbia","funders":"","keywords":"Innate immune system; Cancer research; Biology; Immune system; Ovarian cancer; Chemokine; Signal transduction; Immunotherapy; Interferon; Cancer; Immunology; Cell biology","score_opus":0.010060116004083876,"score_gpt":0.2679961304980132,"score_spread":0.25793601449392933,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396943617","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99929607,0.00020695428,0.00014806162,0.0000193226,0.0000059423846,0.0000066924135,0.000054775384,0.000013206118,0.00024887268],"genre_scores_gemma":[0.9994925,0.00008932159,0.00007951498,0.000016282283,0.0000017490386,0.00000638303,0.000058556354,0.0000030008155,0.00025256656],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999137,0.000024725412,0.000010251052,0.00001052541,0.000016481865,0.000024345076],"domain_scores_gemma":[0.99984705,0.000036292367,0.00002923533,0.000019668709,0.000007073716,0.000060761988],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014812604,0.00014753513,0.00019235493,0.00017714956,0.00011113494,0.00017468119,0.00009300632,0.00019770877,0.0009510294],"category_scores_gemma":[0.00016904091,0.000091539296,0.00013107978,0.00014749884,0.00019637842,0.000092219794,0.00014327162,0.00027202803,0.00014346697],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00091948826,0.00024134571,0.004051227,0.000036143123,0.000011039441,0.00020396683,0.000032347052,0.00016201439,0.99117553,0.0000738602,0.00007862197,0.003014381],"study_design_scores_gemma":[0.00018377564,0.005574368,0.123284146,0.000014837262,0.00004690023,0.001989355,0.0002035645,0.005254368,0.8596545,0.00018171966,0.0036015785,0.0000109191615],"about_ca_topic_score_codex":0.0005060266,"about_ca_topic_score_gemma":0.00077782426,"teacher_disagreement_score":0.0009510294,"about_ca_system_score_codex":0.00017750685,"about_ca_system_score_gemma":0.00013334522,"threshold_uncertainty_score":0.0031814575},"labels":[],"label_agreement":null},{"id":"W4397046166","doi":"10.1681/asn.20223311s1443b","title":"Renal Involvement and Novel Kidney Biopsy Findings in a Young Girl With Aicardi-Goutières Syndrome","year":2022,"lang":"en","type":"article","venue":"Journal of the American Society of Nephrology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Children's Hospital","funders":"","keywords":"Girl; Renal biopsy; Medicine; Kidney; Nephrology; Biopsy; Pathology; Internal medicine; Psychology; Developmental psychology","score_opus":0.009655008514448954,"score_gpt":0.2284381440190684,"score_spread":0.21878313550461945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4397046166","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9889204,0.0026843955,0.0015844573,0.0011432728,0.00008047934,0.00007480832,0.0003319306,0.00019090134,0.0049893623],"genre_scores_gemma":[0.99763083,0.0006505331,0.00073332887,0.00031616198,0.00008677283,0.000010195609,0.00009419604,0.000017378747,0.00046059416],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9994814,0.00003933993,0.00004760813,0.00018444982,0.00008474837,0.00016250944],"domain_scores_gemma":[0.999054,0.00020111026,0.00012771197,0.00003827229,0.00007748945,0.00050140027],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032845052,0.0010798527,0.00090640545,0.0023972269,0.0012917664,0.0007978566,0.00090281694,0.0027483867,0.0021328481],"category_scores_gemma":[0.0012552531,0.0007815209,0.0007690489,0.0011197345,0.0008823356,0.0010133253,0.0008498046,0.0015181957,0.0005644484],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052126725,0.000048795853,0.022878867,0.00004280616,0.000016322369,0.9725414,0.00022081708,0.000075784286,0.0029235173,0.00008563988,0.00020002863,0.00091379567],"study_design_scores_gemma":[0.000013004869,0.00007355369,0.026263254,0.00002098026,0.000022576662,0.9721644,0.000117885225,0.00025946958,0.00060909195,0.00006793302,0.00037752948,0.000010371966],"about_ca_topic_score_codex":0.0041718944,"about_ca_topic_score_gemma":0.0044193957,"teacher_disagreement_score":0.0041718944,"about_ca_system_score_codex":0.0008241613,"about_ca_system_score_gemma":0.0007291471,"threshold_uncertainty_score":0.008295238},"labels":[],"label_agreement":null},{"id":"W4398131517","doi":"10.1101/2024.05.15.594393","title":"ISGylation of the SARS-CoV-2 N protein by HERC5 impedes N oligomerization and thereby viral RNA synthesis","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"RNA; Virology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Chemistry; Biology; Cell biology; Biochemistry; Medicine; Gene; Infectious disease (medical specialty); Outbreak","score_opus":0.01049654581405939,"score_gpt":0.2202359088272006,"score_spread":0.2097393630131412,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4398131517","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965821,0.00041748374,0.0017402996,0.00006666773,0.000015452013,0.000008661438,0.000098581055,0.000031350886,0.0010393955],"genre_scores_gemma":[0.99741036,0.00013864317,0.00085280713,0.000036825353,0.000002045064,0.000005808758,0.00019711824,0.000005947473,0.0013504865],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998846,0.0000146684115,0.000009463822,0.000024700772,0.000030707703,0.00003580288],"domain_scores_gemma":[0.99994695,0.0000060593725,0.000016690366,0.000007922955,0.000007750779,0.000014581829],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011859567,0.00024718078,0.00017160442,0.00009324351,0.00015603993,0.00020627532,0.00015933903,0.00021900979,0.0010729863],"category_scores_gemma":[0.00008266923,0.00008821615,0.0002569317,0.000062226965,0.00019322937,0.00016298845,0.00017052675,0.00032340348,0.00019149209],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010074345,0.000022987078,0.0003981797,0.00002252665,0.0000055890464,0.000038968024,0.000006238315,0.00014303041,0.99819916,0.00015894805,0.000038281683,0.0008653134],"study_design_scores_gemma":[0.000006442972,0.000088000386,0.0024839863,0.0000021923868,0.0000048803367,0.00009238806,0.000011047805,0.0019246732,0.99433017,0.000022963564,0.0010310604,0.0000021597148],"about_ca_topic_score_codex":0.0015707697,"about_ca_topic_score_gemma":0.00199887,"teacher_disagreement_score":0.0015707697,"about_ca_system_score_codex":0.00047863953,"about_ca_system_score_gemma":0.00029877626,"threshold_uncertainty_score":0.0035894513},"labels":[],"label_agreement":null},{"id":"W4398316373","doi":"10.1093/hmg/ddae031","title":"Mitochondrial DNA release and sensing in innate immune responses","year":2024,"lang":"en","type":"review","venue":"Human Molecular Genetics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; University of Calgary","funders":"National Heart, Lung, and Blood Institute; Natural Sciences and Engineering Research Council of Canada; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Innate immune system; Immune system; Biology; Mitochondrial DNA; Cell biology; Mitochondrion; Signal transduction; Inflammation; Interferon; Cell; Immunology; Biochemistry","score_opus":0.029653492052595296,"score_gpt":0.3226038159355107,"score_spread":0.29295032388291536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4398316373","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006674866,0.9981079,0.00011184493,0.00028305443,0.00032731312,0.0000023833777,0.000008083828,0.000006332761,0.0010863135],"genre_scores_gemma":[0.00049400557,0.9980782,0.00012040474,0.00019135239,0.00033891652,0.000003959227,0.000015923548,0.0000013684405,0.00075586094],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998783,0.000023459117,0.000015289092,0.000021991045,0.00004657938,0.00001440895],"domain_scores_gemma":[0.9998287,0.00006776581,0.000022953263,0.0000060680522,0.000046031666,0.000028419012],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041118334,0.00080706354,0.0009102767,0.0018668044,0.00029568747,0.0009832404,0.00070007204,0.0013447631,0.0033524113],"category_scores_gemma":[0.00041725134,0.00022951722,0.0002799653,0.0018617264,0.0006054908,0.0014957187,0.0008425725,0.0016548077,0.00322361],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007240319,0.000050762723,0.00015702832,0.011194074,0.00004289126,0.00026989708,0.00008420043,0.00034045073,0.0035019398,0.009624258,0.045585614,0.92907655],"study_design_scores_gemma":[0.000005284954,0.000035961133,0.00041671412,0.0016813683,0.000022780117,0.000896171,0.00003758125,0.000039312457,0.00033749934,0.0025472532,0.9939697,0.000010481317],"about_ca_topic_score_codex":0.00054711703,"about_ca_topic_score_gemma":0.00084201025,"teacher_disagreement_score":0.0033524113,"about_ca_system_score_codex":0.0007346814,"about_ca_system_score_gemma":0.0008480529,"threshold_uncertainty_score":0.011214912},"labels":[],"label_agreement":null},{"id":"W4398415249","doi":"10.7910/dvn/o7eggp/nwcvmq","title":"childmarr_5Feb2019CSVversion.tab","year":2019,"lang":"it","type":"dataset","venue":"Harvard Dataverse","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Computer science","score_opus":0.014516013419076098,"score_gpt":0.24080122246790464,"score_spread":0.22628520904882854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4398415249","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008598712,0.000096559976,0.000041236577,0.00007674638,0.000020654137,0.000005158125,0.9985857,0.00052471674,0.0005632839],"genre_scores_gemma":[0.00070363114,0.00010953902,0.00018699687,0.00011577154,0.000015807884,0.000058055462,0.99774677,0.00020512199,0.0008583058],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990526,0.00014974714,0.000092434784,0.0003293421,0.00018779634,0.00018808185],"domain_scores_gemma":[0.997421,0.0010604339,0.00026997787,0.0005639126,0.0003504184,0.0003342345],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010281256,0.0029109821,0.0019231591,0.00403064,0.001020197,0.00370398,0.0030577164,0.0031191453,0.18511863],"category_scores_gemma":[0.0076836036,0.00090629846,0.0018330319,0.0059991926,0.000599407,0.001642711,0.0022031048,0.0019626906,0.17158905],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007743444,0.000015670143,0.00066718616,0.0008038761,0.00003764475,0.000022991637,0.000017089666,0.00022043394,0.00008911086,0.00040507736,0.99612504,0.0015182769],"study_design_scores_gemma":[0.00041926638,0.000031821834,0.0031553605,0.00037286445,0.00006226409,0.00009142509,0.000052046715,0.00051124394,0.0004252911,0.001761052,0.9930815,0.000035919613],"about_ca_topic_score_codex":0.017829506,"about_ca_topic_score_gemma":0.026434274,"teacher_disagreement_score":0.8148814,"about_ca_system_score_codex":0.0016924943,"about_ca_system_score_gemma":0.0022768278,"threshold_uncertainty_score":0.61928356},"labels":[],"label_agreement":null},{"id":"W4399327048","doi":"10.7554/elife.98058","title":"Copy number variation and population-specific immune genes in the model vertebrate zebrafish","year":2024,"lang":"en","type":"article","venue":"eLife","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Deutsche Forschungsgemeinschaft","keywords":"Zebrafish; Biology; Vertebrate; Copy-number variation; Genetics; Evolutionary biology; Gene; Population; Computational biology; Variation (astronomy); Genome","score_opus":0.01370122261001784,"score_gpt":0.2548114693393779,"score_spread":0.2411102467293601,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399327048","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994693,0.00028374232,0.002656885,0.000030288717,0.0000038148764,0.000014333011,0.001277878,0.000059085596,0.0009809943],"genre_scores_gemma":[0.9954457,0.00011763381,0.0023255327,0.000030556836,0.0000029443347,0.00006989115,0.00087249157,0.000052014035,0.001083183],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997656,0.000024126812,0.000017293425,0.00010221008,0.0000654507,0.000025401756],"domain_scores_gemma":[0.999744,0.00006862403,0.00010764646,0.000032371143,0.000026897425,0.000020485699],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026579684,0.00015229057,0.00017441141,0.000863598,0.00020688078,0.0002490762,0.00021134017,0.00026202915,0.0013057565],"category_scores_gemma":[0.00047816185,0.000153639,0.0001807923,0.00033807964,0.00033812138,0.00014482468,0.00023128913,0.00025681197,0.00020464169],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020240934,0.000021026826,0.022440357,0.00003336795,0.000048988015,0.00009436952,0.00018145189,0.0004242524,0.9712125,0.00027013675,0.00010621387,0.0049648946],"study_design_scores_gemma":[0.000047338755,0.0005356503,0.84941876,0.000022726254,0.00018059184,0.0008766541,0.00029082046,0.0039604893,0.13906887,0.00076658296,0.004765179,0.000066393586],"about_ca_topic_score_codex":0.0030804132,"about_ca_topic_score_gemma":0.005645406,"teacher_disagreement_score":0.0030804132,"about_ca_system_score_codex":0.00045449415,"about_ca_system_score_gemma":0.00011484945,"threshold_uncertainty_score":0.0061249733},"labels":[],"label_agreement":null},{"id":"W4399355375","doi":"10.1093/brain/awae175","title":"<i>TRIM71</i> mutations cause a neurodevelopmental syndrome featuring ventriculomegaly and hydrocephalus","year":2024,"lang":"en","type":"article","venue":"Brain","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Kingston Health Sciences Centre; Queen's University","funders":"National Institute of Neurological Disorders and Stroke; National Human Genome Research Institute; Center for Mendelian Genomics, University of Washington; Georgia Clinical and Translational Science Alliance; Rudi Schulte Research Institute; Deutsche Forschungsgemeinschaft; University of Washington; Children's Discovery Institute; National Institutes of Health; Yale University","keywords":"Ventriculomegaly; Hydrocephalus; Medicine; Pediatrics; Genetics; Biology; Pregnancy; Surgery; Fetus","score_opus":0.009279442150876524,"score_gpt":0.24016540912083809,"score_spread":0.23088596696996155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399355375","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9901688,0.0008724164,0.0023246254,0.00022102553,0.000052961204,0.00006863081,0.0018009727,0.00027905704,0.0042114602],"genre_scores_gemma":[0.99524504,0.0004163298,0.0018843386,0.00017069433,0.000059276066,0.00002386329,0.000925639,0.000038672744,0.0012361679],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99983704,0.000018676408,0.000025115229,0.000055140088,0.0000391211,0.000024875993],"domain_scores_gemma":[0.9998109,0.000039056296,0.000070324604,0.000014732771,0.000011723887,0.00005336108],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011136206,0.001111232,0.0003018271,0.00091488427,0.000515773,0.0002298937,0.0003469429,0.0005931626,0.0026956878],"category_scores_gemma":[0.00038486434,0.00014770249,0.0003414843,0.00046556396,0.00054424955,0.00010834856,0.0005198667,0.0003866026,0.0006077787],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00066880643,0.00013321274,0.06454259,0.00035513996,0.00034398225,0.23741871,0.0006881991,0.0007612267,0.652888,0.0016051256,0.0044090156,0.036186002],"study_design_scores_gemma":[0.00011596126,0.0004734485,0.4331987,0.00012269987,0.00030043974,0.45188087,0.00036742957,0.0015954204,0.09685848,0.0010235317,0.014015166,0.000047946232],"about_ca_topic_score_codex":0.001070023,"about_ca_topic_score_gemma":0.0013558845,"teacher_disagreement_score":0.0026956878,"about_ca_system_score_codex":0.0002829093,"about_ca_system_score_gemma":0.00017761604,"threshold_uncertainty_score":0.009017944},"labels":[],"label_agreement":null},{"id":"W4399426440","doi":"10.1021/acsomega.4c02631","title":"SARS-CoV-2 Protein Nsp9 Is Involved in Viral Evasion through Interactions with Innate Immune Pathways","year":2024,"lang":"en","type":"article","venue":"ACS Omega","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Innate immune system; Biology; Immune system; Virus; Interferon; Virology; TLR3; RNA silencing; Antiviral drug; Signal transduction; Transcriptome; Cell biology; RNA interference; RNA; Immunology; Gene; Gene expression; Genetics; Toll-like receptor","score_opus":0.031384658566737285,"score_gpt":0.28315397959225214,"score_spread":0.25176932102551486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399426440","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99245125,0.0028581554,0.0025873147,0.0000899136,0.000018289611,0.000018946408,0.00035186857,0.0000408292,0.0015833926],"genre_scores_gemma":[0.99517363,0.0012240708,0.0016730443,0.000056836998,0.000010771001,0.000019018047,0.0004597766,0.000007011244,0.00137575],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998665,0.00002123793,0.000012093992,0.0000345894,0.00003651711,0.000029202514],"domain_scores_gemma":[0.9999411,0.000006872162,0.000024517718,0.0000048412926,0.000009903683,0.000012727646],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011629189,0.00030779385,0.00023889358,0.00014343591,0.0002019969,0.0003400847,0.00007572655,0.00022412938,0.0007244197],"category_scores_gemma":[0.00007731918,0.00008562595,0.00027182346,0.00010692661,0.00015837369,0.00020630895,0.00020542191,0.00033060438,0.00022483572],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000792218,0.000011533162,0.00067663065,0.00002874926,0.000003868276,0.000041898198,0.000009152537,0.00005545847,0.99800044,0.00004886204,0.000018207966,0.0010258777],"study_design_scores_gemma":[0.000014731484,0.00032201555,0.069578,0.000026494352,0.0000326611,0.0007429413,0.00016673603,0.0028761146,0.921564,0.00031118505,0.004351748,0.000013406787],"about_ca_topic_score_codex":0.00022129208,"about_ca_topic_score_gemma":0.00027057278,"teacher_disagreement_score":0.0007244197,"about_ca_system_score_codex":0.00019807917,"about_ca_system_score_gemma":0.00015771828,"threshold_uncertainty_score":0.0024234056},"labels":[],"label_agreement":null},{"id":"W4399504877","doi":"10.1158/1538-8514.synthleth24-b021","title":"Abstract B021: CFLAR targeting selectively exploits extrinsic apoptosis signaling in triple-negative breast cancer","year":2024,"lang":"en","type":"article","venue":"Molecular Cancer Therapeutics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Necroptosis; Cancer; Cancer research; Programmed cell death; Cancer cell; Apoptosis; Triple-negative breast cancer; Downregulation and upregulation; Medicine; Breast cancer; Biology; Internal medicine; Biochemistry","score_opus":0.022100990123752995,"score_gpt":0.288813788610542,"score_spread":0.266712798486789,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399504877","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.977489,0.0042584515,0.0061051203,0.0005669682,0.00020237936,0.00015265196,0.001703607,0.0003627654,0.009158991],"genre_scores_gemma":[0.9815932,0.0020544808,0.005015916,0.00026921427,0.000024265702,0.000073784686,0.0014045258,0.000067822635,0.009496861],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998672,0.000018414858,0.000010975522,0.000023926972,0.000045637193,0.000033771445],"domain_scores_gemma":[0.9999417,0.000009046957,0.000013272383,0.000007542611,0.00001010089,0.000018282744],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019753542,0.00029448984,0.00037207274,0.00027409405,0.00020148445,0.00033347422,0.00023763801,0.00038046765,0.002405551],"category_scores_gemma":[0.00008865983,0.00011683798,0.00020809172,0.00016140446,0.00021655994,0.00014995932,0.00022562966,0.0005934335,0.0007808294],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013087355,0.0000334953,0.00008590471,0.000028384185,0.0000037370505,0.00008050292,0.000008409519,0.00008298505,0.9966844,0.0001480832,0.00025706794,0.0024563246],"study_design_scores_gemma":[0.000028093942,0.0006572175,0.0011841469,0.0000063813036,0.00001497435,0.0007273732,0.000017967079,0.00041813013,0.9908687,0.000041874984,0.0060288366,0.000006240476],"about_ca_topic_score_codex":0.00078779244,"about_ca_topic_score_gemma":0.0015532736,"teacher_disagreement_score":0.002405551,"about_ca_system_score_codex":0.00040217338,"about_ca_system_score_gemma":0.00029164436,"threshold_uncertainty_score":0.008047402},"labels":[],"label_agreement":null},{"id":"W4399528318","doi":"10.3390/biology13060431","title":"Double-Edged Sword: Exploring the Mitochondria–Complement Bidirectional Connection in Cellular Response and Disease","year":2024,"lang":"en","type":"article","venue":"Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; Michael Smith Health Research BC; Natural Sciences and Engineering Research Council of Canada; St. Paul's Foundation","keywords":"Biology; Immune system; Mitochondrion; Complement system; Innate immune system; Classical complement pathway; Cell biology; Alternative complement pathway; Acquired immune system; Mitochondrial DNA; Immunity; Complement membrane attack complex; Crosstalk; Immunology; Computational biology; Genetics; Gene","score_opus":0.04710301835085137,"score_gpt":0.28579143615362684,"score_spread":0.23868841780277547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399528318","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0064282417,0.97715944,0.0029126122,0.007809748,0.0009900662,0.0000127046405,0.000025187259,0.000021310365,0.004640725],"genre_scores_gemma":[0.058927853,0.92799133,0.0030556119,0.0033381262,0.0019075512,0.000020421705,0.00004225544,0.000008533428,0.0047082985],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998969,0.000034422686,0.0000066604844,0.00001797465,0.000025900481,0.000018145192],"domain_scores_gemma":[0.99988425,0.000043646553,0.000015101161,0.000004989137,0.000025482079,0.000026415297],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049073435,0.00031663667,0.00040262763,0.00068538944,0.00033349043,0.0010889776,0.000352157,0.00094916014,0.0014250191],"category_scores_gemma":[0.0002525166,0.00008660083,0.0002684419,0.0005645765,0.0010314825,0.0021742997,0.00074120495,0.0014530192,0.00031734962],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052234705,0.000122679,0.0021034833,0.0079129385,0.00019794036,0.0023479506,0.001891867,0.0010735716,0.09011559,0.15636995,0.03443913,0.7029026],"study_design_scores_gemma":[0.000030173334,0.000572452,0.005364149,0.002556253,0.00012615882,0.0043880288,0.002019893,0.0015716832,0.0139423525,0.120503545,0.8488536,0.00007174472],"about_ca_topic_score_codex":0.00053775695,"about_ca_topic_score_gemma":0.0010843055,"teacher_disagreement_score":0.0014250191,"about_ca_system_score_codex":0.0006338019,"about_ca_system_score_gemma":0.0005925761,"threshold_uncertainty_score":0.0047671795},"labels":[],"label_agreement":null},{"id":"W4399546207","doi":"10.1161/circresaha.123.324202","title":"TRIM35 Monoubiquitinates H2B in Cardiac Cells, Implications for Heart Failure","year":2024,"lang":"en","type":"article","venue":"Circulation Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Health Economics; Northern Alberta Institute of Technology; University of Alberta","funders":"","keywords":"Biology; Gene knockdown; Chromatin immunoprecipitation; Dilated cardiomyopathy; Transcription factor; Chromatin remodeling; Genetically modified mouse; Chromatin; Promoter; Epigenetics; Cell biology; Small interfering RNA; Transgene; Transcriptional regulation; Molecular biology; Histone H2B; Heart failure; Cardiomyopathy; Ubiquitin; RNA; Gene; Gene expression; Internal medicine; Medicine; Genetics","score_opus":0.0646308866844324,"score_gpt":0.3874754253953273,"score_spread":0.3228445387108949,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399546207","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96833616,0.025149293,0.0028704132,0.0008728049,0.00012163135,0.000019194356,0.00053121446,0.00014613965,0.0019531166],"genre_scores_gemma":[0.9937244,0.0030964103,0.0007942538,0.0002471256,0.000046857418,0.000011458543,0.00038038398,0.0000094847455,0.0016895011],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999243,0.0000091871625,0.0000072179046,0.000025811018,0.000016997501,0.000016422995],"domain_scores_gemma":[0.9998926,0.000008293379,0.000034686036,0.00001246873,0.000013815836,0.000038171383],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002601666,0.00020935065,0.00011997562,0.0002446859,0.00016059067,0.00021568272,0.00022922919,0.00034862038,0.0013335395],"category_scores_gemma":[0.00014549904,0.00008532087,0.0001714224,0.000099618344,0.00022773628,0.00019596428,0.0001737483,0.00037589986,0.00036304977],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018348588,0.000027739448,0.0019730823,0.0000875002,0.000016238988,0.00021655454,0.000019705343,0.00006632496,0.9924184,0.00018439912,0.00033236665,0.0044742227],"study_design_scores_gemma":[0.000052643885,0.0006138009,0.08813223,0.000042858854,0.00008997898,0.0042551896,0.00011420191,0.0011955316,0.8929879,0.0006189921,0.011882999,0.0000136657345],"about_ca_topic_score_codex":0.0003755431,"about_ca_topic_score_gemma":0.00063300744,"teacher_disagreement_score":0.0013335395,"about_ca_system_score_codex":0.00039702287,"about_ca_system_score_gemma":0.00010561814,"threshold_uncertainty_score":0.0044611096},"labels":[],"label_agreement":null},{"id":"W4400234445","doi":"10.3390/ijms25137169","title":"SARS-CoV-2 Nucleocapsid Protein Induces Tau Pathological Changes That Can Be Counteracted by SUMO2","year":2024,"lang":"en","type":"article","venue":"International Journal of Molecular Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Occupational Cancer Research Centre; University of Toronto","funders":"National Institute of Neurological Disorders and Stroke; Alzheimer's Association","keywords":"Cell biology; Biology; Molecular biology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); Chemistry; Medicine; Pathology","score_opus":0.035411477875987245,"score_gpt":0.3127627147297073,"score_spread":0.27735123685372004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400234445","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973869,0.00077730505,0.0007897276,0.00006553484,0.000039883616,0.000021858628,0.0001354247,0.000043364907,0.0007401335],"genre_scores_gemma":[0.9966486,0.0006398948,0.0010653111,0.00005768054,0.000015667141,0.00003205642,0.0004405745,0.000010999342,0.001089126],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984956,0.000028084596,0.000020524842,0.000027344164,0.00003366451,0.000040901832],"domain_scores_gemma":[0.99991715,0.000007863208,0.00002661599,0.000016633809,0.00000866577,0.000023011866],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017612621,0.00055412936,0.00030841157,0.00018417156,0.00016254086,0.00021728883,0.00015831435,0.00032179098,0.00069597195],"category_scores_gemma":[0.0001073937,0.00015812139,0.00040789574,0.00012700247,0.0002447993,0.00019073041,0.00019010746,0.0005010725,0.00021498713],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017978938,0.00005837202,0.00020866677,0.000031232372,0.000008501064,0.00005992348,0.000007524016,0.000025997953,0.9988225,0.00003203468,0.000026441987,0.00053905323],"study_design_scores_gemma":[0.000054941476,0.0012193474,0.012615343,0.000009434934,0.00002371327,0.00043201388,0.000040404775,0.0009084514,0.98330045,0.00006538458,0.0013240846,0.000006443049],"about_ca_topic_score_codex":0.00041681703,"about_ca_topic_score_gemma":0.00067002955,"teacher_disagreement_score":0.00069597195,"about_ca_system_score_codex":0.00023045353,"about_ca_system_score_gemma":0.00018423391,"threshold_uncertainty_score":0.0023282766},"labels":[],"label_agreement":null},{"id":"W4401055955","doi":"10.1016/j.xpro.2024.103208","title":"A protocol for measuring the activity of protein kinase C-delta in murine bone-marrow-derived dendritic cells","year":2024,"lang":"en","type":"article","venue":"STAR Protocols","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"National Institutes of Health; Institute of Infection and Immunity; Canadian Institutes of Health Research; Dalhousie University; Natural Sciences and Engineering Research Council of Canada; Dalhousie Medical Research Foundation","keywords":"Diacylglycerol kinase; Protein kinase C; Cell biology; Bone marrow; Chemistry; Kinase; Biology; Immunology","score_opus":0.04246265814328685,"score_gpt":0.3289222047801749,"score_spread":0.28645954663688805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401055955","genre_codex":"methods","genre_gemma":"protocol","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"protocol","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0670761,0.0057213465,0.8405362,0.00085646653,0.0015281838,0.015614393,0.034511738,0.0064689172,0.027686749],"genre_scores_gemma":[0.07741757,0.0061902874,0.7664929,0.00092526054,0.00028953105,0.04584093,0.057116102,0.0011696428,0.044557735],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.997592,0.00039799232,0.0003445452,0.0005435606,0.0008483113,0.0002737501],"domain_scores_gemma":[0.99899143,0.00018749172,0.00009261831,0.0003422405,0.00025102327,0.00013509032],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014300783,0.0027545649,0.00133431,0.0028855968,0.0015897637,0.00078036974,0.002187756,0.001121154,0.012212843],"category_scores_gemma":[0.00066095876,0.0011964457,0.001196035,0.0022159342,0.0006136075,0.0006494181,0.00084522413,0.0052273315,0.010383908],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020650047,0.00018282997,0.00012045742,0.00020802977,0.000019682202,0.00008014986,0.000056201017,0.00018488176,0.99059427,0.0012106516,0.0022248114,0.004911479],"study_design_scores_gemma":[0.0001393358,0.00071122,0.0024891072,0.00011669241,0.00009344665,0.0003505207,0.000029622877,0.0020520892,0.891535,0.0009724123,0.101453945,0.000056585475],"about_ca_topic_score_codex":0.0007559619,"about_ca_topic_score_gemma":0.0022490185,"teacher_disagreement_score":0.012212843,"about_ca_system_score_codex":0.0008518967,"about_ca_system_score_gemma":0.001322909,"threshold_uncertainty_score":0.040856004},"labels":[],"label_agreement":null},{"id":"W4401160002","doi":"10.1016/j.intimp.2024.112768","title":"The crosstalk between DNA-damage responses and innate immunity","year":2024,"lang":"en","type":"review","venue":"International Immunopharmacology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Science Foundation of Hebei Province; Department of Education of Hebei Province; National Natural Science Foundation of China","keywords":"Innate immune system; Biology; DNA damage; Immune system; Crosstalk; Immunology; Innate lymphoid cell; Immunity; Cell biology; DNA; Genetics","score_opus":0.04895560555917529,"score_gpt":0.4003648413494821,"score_spread":0.3514092357903068,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401160002","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008726633,0.99831957,0.00012916909,0.00022652246,0.00027589253,0.0000027048302,0.000007624477,0.0000076675415,0.0009434994],"genre_scores_gemma":[0.000554846,0.99814796,0.00015466515,0.00017972794,0.0002428991,0.0000051956135,0.000017944492,0.0000011961027,0.0006954953],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998628,0.000023998484,0.00001731303,0.00002649602,0.000052234973,0.00001719513],"domain_scores_gemma":[0.99984765,0.00006622019,0.000020414722,0.0000052745245,0.000040185692,0.000020248533],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038496268,0.00086202397,0.00092543336,0.00153134,0.00024709385,0.00081255974,0.0006526551,0.0009058115,0.0029799035],"category_scores_gemma":[0.00034290354,0.0002246703,0.0003092755,0.0014842022,0.00040256252,0.0012571417,0.0006568478,0.0016477455,0.0019594408],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005458751,0.00005175739,0.00011868248,0.010107772,0.000045180204,0.00018040347,0.00004791366,0.0003246508,0.0029026705,0.004588922,0.028379528,0.95319796],"study_design_scores_gemma":[0.000008585324,0.00006638784,0.0005708591,0.002019412,0.000036714457,0.0010509088,0.000039458908,0.00006537062,0.0005404902,0.0022975814,0.9932921,0.000012144367],"about_ca_topic_score_codex":0.0004509367,"about_ca_topic_score_gemma":0.0008190665,"teacher_disagreement_score":0.0029799035,"about_ca_system_score_codex":0.00060074707,"about_ca_system_score_gemma":0.0008807762,"threshold_uncertainty_score":0.009968758},"labels":[],"label_agreement":null},{"id":"W4401208125","doi":"10.1093/nar/gkae654","title":"Loss of the DNA repair protein, polynucleotide kinase/phosphatase, activates the type 1 interferon response independent of ionizing radiation","year":2024,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; University of Alberta; Alberta Cancer Foundation; Cancer Research Institute","keywords":"Biology; DNA damage; DNA repair; Interferon; Mitochondrial DNA; Cell biology; Kinase; Molecular biology; DNA; Gene; Genetics","score_opus":0.028894970812459553,"score_gpt":0.3158240279442551,"score_spread":0.28692905713179556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401208125","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928526,0.0019610077,0.0036781589,0.00009943714,0.000032413314,0.0000244108,0.00024489907,0.000056742305,0.001050262],"genre_scores_gemma":[0.9959442,0.001133163,0.0012834589,0.00002911488,0.000009452498,0.000023929271,0.00032056516,0.000006490259,0.0012495844],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988794,0.000023577228,0.000010506185,0.000026146092,0.000029253319,0.000022579294],"domain_scores_gemma":[0.9999193,0.00001721402,0.000028888166,0.000015045554,0.000007651638,0.000011910847],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010858718,0.00031910744,0.00019939158,0.00012454014,0.00009860227,0.00023781367,0.00009443713,0.00017752359,0.0008934788],"category_scores_gemma":[0.00009893201,0.00006943637,0.00018618723,0.00008934141,0.00020021114,0.00015968748,0.00015899315,0.00050997885,0.00023551725],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039852122,0.000008374956,0.00011116881,0.000020110967,0.0000018956385,0.000018054936,0.0000041897215,0.000025191077,0.9992022,0.000029298033,0.000009156194,0.0005304705],"study_design_scores_gemma":[0.000005182834,0.00023201205,0.0030398364,0.0000044865496,0.000006870423,0.00015873248,0.000015900208,0.00039189451,0.99507207,0.000028026154,0.0010432691,0.0000017066008],"about_ca_topic_score_codex":0.00013482527,"about_ca_topic_score_gemma":0.0002671566,"teacher_disagreement_score":0.0008934788,"about_ca_system_score_codex":0.00014765814,"about_ca_system_score_gemma":0.00011210981,"threshold_uncertainty_score":0.0029889941},"labels":[],"label_agreement":null},{"id":"W4401219283","doi":"10.3899/jrheum.2024-0294","title":"Children With Type I Interferonopathy: Commonalities and Diversities in a Large Patient Cohort","year":2024,"lang":"en","type":"article","venue":"The Journal of Rheumatology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Istanbul Üniversitesi-Cerrahpasa","keywords":"Medicine; Cohort; Cohort study; Pediatrics; Internal medicine","score_opus":0.00578070642141103,"score_gpt":0.21104012793952504,"score_spread":0.205259421518114,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401219283","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99904484,0.00040133976,0.00010995551,0.000035015026,0.0000051717648,0.000009978424,0.00015507957,0.0000044921244,0.00023420292],"genre_scores_gemma":[0.9990803,0.0003652131,0.00012896914,0.000029600536,0.000033436565,0.000014888515,0.00029160263,0.000004503668,0.00005141779],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989894,0.00023333986,0.00012035501,0.00031037643,0.00015600427,0.00019040922],"domain_scores_gemma":[0.99839824,0.00039541748,0.00078354776,0.00013339367,0.00008042178,0.00020903474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006880672,0.00049293705,0.00075297384,0.0016422544,0.0007566354,0.0010112018,0.00040087354,0.00050044985,0.0018683777],"category_scores_gemma":[0.002354448,0.00043912863,0.00047349377,0.0016077338,0.00058380933,0.0011861755,0.0010523084,0.0005965417,0.00033487665],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056005614,0.000016651118,0.99810743,0.0000051273532,0.000024186398,0.00068842835,0.00008555611,0.0000156966,0.0001497605,0.000021208534,0.00004399836,0.0007858538],"study_design_scores_gemma":[0.000013361012,0.00016584645,0.9843919,0.000019414201,0.00003581882,0.013565691,0.0011397069,0.00016601324,0.000084652944,0.00006337088,0.0003434489,0.000010758361],"about_ca_topic_score_codex":0.0014332967,"about_ca_topic_score_gemma":0.001516407,"teacher_disagreement_score":0.0018683777,"about_ca_system_score_codex":0.00025283362,"about_ca_system_score_gemma":0.00036684386,"threshold_uncertainty_score":0.006250322},"labels":[],"label_agreement":null},{"id":"W4401421178","doi":"10.1016/j.celrep.2024.114608","title":"The deubiquitinase BAP1 and E3 ligase UBE3C sequentially target IRF3 to activate and resolve the antiviral innate immune response","year":2024,"lang":"en","type":"article","venue":"Cell Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Natural Science Foundation of Zhejiang Province; National Natural Science Foundation of China","keywords":"IRF3; Ubiquitin ligase; Deubiquitinating enzyme; Ubiquitin; Innate immune system; Cell biology; Biology; Interferon; Immune system; Immunology; Biochemistry; Gene","score_opus":0.006977282049543351,"score_gpt":0.2380703513725794,"score_spread":0.23109306932303605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401421178","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9560903,0.016090468,0.021167027,0.0004839198,0.00011727932,0.000056865076,0.0006837708,0.00030157887,0.005008866],"genre_scores_gemma":[0.9899928,0.0018005514,0.0037683183,0.000090690926,0.0000165316,0.000018769666,0.00039473656,0.000021077916,0.0038965382],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99969983,0.000032619864,0.000015611544,0.000073006064,0.00007708815,0.00010190709],"domain_scores_gemma":[0.99985194,0.00001369889,0.00004046583,0.000020418373,0.000033127566,0.000040284784],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002935894,0.0003945066,0.00039027818,0.00031687133,0.00037121976,0.0005916404,0.00026309554,0.00052948226,0.0027576932],"category_scores_gemma":[0.0002013552,0.00018992937,0.00048498082,0.00022682852,0.00032006353,0.00051434146,0.00051522075,0.0008766593,0.0012009912],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015263351,0.000027787031,0.0015245029,0.000057275625,0.000013987143,0.00012394138,0.000016888554,0.00012411301,0.9916608,0.000382474,0.0001328432,0.005782788],"study_design_scores_gemma":[0.000009653368,0.00008370064,0.010239141,0.000010469143,0.000013406642,0.0006459313,0.000048761984,0.0011378189,0.9805711,0.00021610004,0.007015086,0.000008737057],"about_ca_topic_score_codex":0.0004370706,"about_ca_topic_score_gemma":0.0006339215,"teacher_disagreement_score":0.0027576932,"about_ca_system_score_codex":0.0007211445,"about_ca_system_score_gemma":0.00036180092,"threshold_uncertainty_score":0.009225428},"labels":[],"label_agreement":null},{"id":"W4401425262","doi":"10.1038/s41419-024-06964-4","title":"Regulation of Zfp36 by ISGF3 and MK2 restricts the expression of inflammatory cytokines during necroptosis stimulation","year":2024,"lang":"en","type":"article","venue":"Cell Death and Disease","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity; University of Ottawa","funders":"Canadian Institutes of Health Research; Government of Canada","keywords":"Necroptosis; Downregulation and upregulation; Cell biology; MAPK/ERK pathway; Chemokine; Proinflammatory cytokine; Signal transduction; Tumor necrosis factor alpha; Cytokine; Chemistry; Cancer research; Biology; Programmed cell death; Inflammation; Immunology; Apoptosis; Biochemistry","score_opus":0.00602485591900225,"score_gpt":0.21272932732054892,"score_spread":0.20670447140154666,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401425262","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9913908,0.0016230856,0.0043133916,0.00012804734,0.000049739225,0.00005200654,0.0007721691,0.00025417018,0.0014165712],"genre_scores_gemma":[0.99310774,0.000400771,0.0031657629,0.000064244705,0.000012210242,0.000066257315,0.0011135496,0.000046211455,0.0020232815],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997203,0.000027475608,0.000028521654,0.00006465958,0.00006955682,0.00008943358],"domain_scores_gemma":[0.9998473,0.000023117396,0.0000514631,0.000016690934,0.000014457726,0.00004700122],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018768608,0.00033944915,0.00044248666,0.00021793183,0.00020784962,0.00027634122,0.0002556135,0.0002689181,0.0014643777],"category_scores_gemma":[0.00016926575,0.0001333896,0.00034755978,0.00019097899,0.00037420564,0.00018852744,0.00030354847,0.00066227856,0.0005757054],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016800969,0.000014963891,0.00009506092,0.000030221867,0.00000237964,0.00002805315,0.000016888012,0.00004698372,0.9989767,0.00004669578,0.000041998097,0.0005319703],"study_design_scores_gemma":[0.000031552623,0.00017211358,0.0028333317,0.0000060586285,0.000011695366,0.00019191155,0.000023349396,0.0006558973,0.99324954,0.00004473268,0.0027728693,0.0000070052397],"about_ca_topic_score_codex":0.0009176723,"about_ca_topic_score_gemma":0.0012573111,"teacher_disagreement_score":0.0014643777,"about_ca_system_score_codex":0.00046945285,"about_ca_system_score_gemma":0.00028390935,"threshold_uncertainty_score":0.0048987865},"labels":[],"label_agreement":null},{"id":"W4401460302","doi":"10.17504/protocols.io.4r3l2qb9jl1y/v1","title":"SARS-CoV-2 nsp3 macrodomain His-tagged expression and purification protocol for assay v1","year":2024,"lang":"en","type":"preprint","venue":"","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Discovery Centre","funders":"","keywords":"Protocol (science); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); Expression (computer science); Virology; Computational biology; Computer science; Biology; Chemistry; Molecular biology; Medicine","score_opus":0.04264132148726529,"score_gpt":0.3439595426781914,"score_spread":0.3013182211909261,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401460302","genre_codex":"methods","genre_gemma":"protocol","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"protocol","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15254985,0.0058382456,0.5161414,0.001849797,0.0028938937,0.012578256,0.2215062,0.016145501,0.0704969],"genre_scores_gemma":[0.1528933,0.005878719,0.24143018,0.00099626,0.0003235848,0.011958247,0.43968904,0.0055085956,0.1413221],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990289,0.00012757376,0.00009131182,0.00021245219,0.00035552657,0.00018428106],"domain_scores_gemma":[0.99960905,0.000062254934,0.000024324525,0.00014364171,0.000099966994,0.000060758415],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008704396,0.0018152802,0.001368772,0.0011639423,0.001286284,0.0010360783,0.0016158635,0.00071101415,0.028566135],"category_scores_gemma":[0.0007867743,0.0011856643,0.0010001389,0.0012079771,0.00045612565,0.0005873565,0.00092969445,0.0033957167,0.042664785],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026964318,0.000121867546,0.000192178,0.00037778215,0.000028778892,0.00009293396,0.0001138516,0.00019806673,0.9738097,0.001456801,0.016053446,0.007284894],"study_design_scores_gemma":[0.000066249406,0.00013570116,0.0017289667,0.00007070105,0.0000420872,0.0003585346,0.000052773466,0.0013302832,0.8159573,0.0008309557,0.17936787,0.00005855217],"about_ca_topic_score_codex":0.0020787844,"about_ca_topic_score_gemma":0.0032032584,"teacher_disagreement_score":0.028566135,"about_ca_system_score_codex":0.00076750416,"about_ca_system_score_gemma":0.00093027315,"threshold_uncertainty_score":0.09556317},"labels":[],"label_agreement":null},{"id":"W4401520588","doi":"10.3390/v16081282","title":"Human Stimulator of Interferon Genes Promotes Rhinovirus C Replication in Mouse Cells In Vitro and In Vivo","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; National Institute of Allergy and Infectious Diseases; University of Maryland; York University; AstraZeneca","keywords":"Biology; In vivo; Rhinovirus; Virology; Virus; Interferon; Viral replication; Genetically modified mouse; In vitro; Titer; Transgene; Gene; Immunology; Genetics","score_opus":0.024052168446626766,"score_gpt":0.2930880094330523,"score_spread":0.2690358409864255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401520588","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98689306,0.0025587105,0.0050990265,0.00017487581,0.00009172922,0.00007618979,0.0014084523,0.00017949249,0.0035183216],"genre_scores_gemma":[0.9861661,0.0013659325,0.005107082,0.00014280631,0.000031238906,0.00014233438,0.0019824284,0.000053993543,0.0050080684],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994821,0.00013598619,0.00006055473,0.00010328367,0.00011396364,0.00010419862],"domain_scores_gemma":[0.99969625,0.000092206166,0.000051221596,0.00006905106,0.000026701598,0.00006462178],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049982464,0.0005459922,0.0003118597,0.00051325007,0.00015140805,0.00043783704,0.00023229868,0.00042497372,0.0016233008],"category_scores_gemma":[0.00019826605,0.00023196293,0.00043880957,0.0001611979,0.00023408917,0.00021410118,0.00020277282,0.0010734218,0.0010096071],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009342232,0.000048804763,0.0001381148,0.0000203433,0.000003655372,0.000023520879,0.000021600425,0.00005348349,0.99904805,0.00006638929,0.00004663894,0.00043587646],"study_design_scores_gemma":[0.000026189506,0.00069876254,0.0030742988,0.000011083139,0.000012593982,0.00016122329,0.000033317137,0.0014226073,0.99275947,0.000042673946,0.0017524329,0.0000055184673],"about_ca_topic_score_codex":0.0008505033,"about_ca_topic_score_gemma":0.0008370896,"teacher_disagreement_score":0.0016233008,"about_ca_system_score_codex":0.0003124454,"about_ca_system_score_gemma":0.00019451782,"threshold_uncertainty_score":0.00543046},"labels":[],"label_agreement":null},{"id":"W4401665665","doi":"10.1016/j.jbc.2024.107686","title":"ISGylation enhances dsRNA-induced interferon response and NFκB signaling in fallopian tube epithelial cells","year":2024,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; Lunenfeld-Tanenbaum Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Fallopian tube; Interferon; Cell biology; Signal transduction; RNA silencing; Virology; Biology; Chemistry; RNA; RNA interference; Gene; Genetics; Anatomy","score_opus":0.020241534771388067,"score_gpt":0.265845780477175,"score_spread":0.24560424570578693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401665665","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958009,0.0009904869,0.00092207687,0.00010247453,0.000029621306,0.00003226171,0.00043831093,0.00006569055,0.0016180801],"genre_scores_gemma":[0.9959693,0.00034645642,0.00101173,0.00006185817,0.000004864872,0.000035982554,0.00072660454,0.000010589339,0.0018326845],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984455,0.000026671096,0.000019949608,0.00003079348,0.000038892915,0.000039248906],"domain_scores_gemma":[0.9999206,0.000013044896,0.00002048328,0.000015113942,0.000007270501,0.00002340393],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015173903,0.00022069829,0.0002750653,0.00019814869,0.00013354552,0.00026888298,0.0001627108,0.00029861025,0.0017717521],"category_scores_gemma":[0.00009475989,0.0001441111,0.00036644714,0.00014336167,0.00017770143,0.00014236722,0.00021782856,0.00053752225,0.0003726567],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012130275,0.000038364262,0.00017004106,0.000029335759,0.0000047960793,0.000031662217,0.000015445377,0.000045979898,0.99879384,0.00004109225,0.000035889527,0.00067228265],"study_design_scores_gemma":[0.000032707678,0.00039323868,0.01027141,0.000009703491,0.00001257501,0.00015836209,0.000040361483,0.0012404558,0.98547643,0.00004776449,0.002311592,0.0000054410834],"about_ca_topic_score_codex":0.0007966851,"about_ca_topic_score_gemma":0.0010459113,"teacher_disagreement_score":0.0017717521,"about_ca_system_score_codex":0.00029680962,"about_ca_system_score_gemma":0.00017977446,"threshold_uncertainty_score":0.005927086},"labels":[],"label_agreement":null},{"id":"W4401905207","doi":"10.1007/978-1-0716-4108-8_15","title":"Investigation of Protein Lysine Acetylation in Antiviral Innate Immunity","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Acetylation; Innate immune system; Lysine; Biology; Interferon; Context (archaeology); Immunoprecipitation; Antiviral protein; Virology; Antibody; Biochemistry; Immunology; Amino acid; Gene; Immune system; RNA","score_opus":0.0258410897155969,"score_gpt":0.3676927135981233,"score_spread":0.3418516238825264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905207","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.984688,0.0063146446,0.005694883,0.0001712957,0.00006903043,0.000025366407,0.00026750079,0.000028351813,0.0027409315],"genre_scores_gemma":[0.99194664,0.002500661,0.0026711987,0.0000629129,0.000030697494,0.000014069597,0.00028235943,0.000011501782,0.002479891],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990046,0.000018136501,0.0000071992126,0.000023940345,0.000021028962,0.000029374818],"domain_scores_gemma":[0.9999231,0.000018042307,0.0000155042,0.000015286467,0.000013254287,0.000014859154],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032358576,0.0002692375,0.00019374667,0.00020720156,0.000243984,0.00024642143,0.0002634078,0.00024060984,0.0010339671],"category_scores_gemma":[0.00014286413,0.00014741729,0.00020245404,0.00022066863,0.00032109502,0.0003377424,0.00017333776,0.0004326397,0.00020849051],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052437815,0.000020698666,0.0009560389,0.00005138397,0.000010780222,0.00003647636,0.000015317955,0.0000904003,0.9942973,0.0005249263,0.000030210793,0.0034420814],"study_design_scores_gemma":[0.00002557467,0.00026584032,0.012196847,0.0000070251585,0.000023487852,0.00021022142,0.000030944055,0.0008940372,0.9830009,0.00036829882,0.0029698533,0.0000070945057],"about_ca_topic_score_codex":0.00050635665,"about_ca_topic_score_gemma":0.0008062184,"teacher_disagreement_score":0.0010339671,"about_ca_system_score_codex":0.00037769406,"about_ca_system_score_gemma":0.00023010577,"threshold_uncertainty_score":0.0034589171},"labels":[],"label_agreement":null},{"id":"W4401905211","doi":"10.1007/978-1-0716-4108-8_18","title":"Cryo-Electron Microscopy in the Study of Antiviral Innate Immunity","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Cryo-electron microscopy; Resolution (logic); Electron microscope; Innate immune system; Nanotechnology; Computational biology; Microscopy; Biology; Biological system; Computer science; Materials science; Biophysics; Artificial intelligence; Physics; Immunology; Optics; Immune system","score_opus":0.02014226598728872,"score_gpt":0.4189054091247764,"score_spread":0.3987631431374877,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905211","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.29996505,0.3122948,0.34481785,0.0076991953,0.0017812093,0.0002677668,0.0006160675,0.00044078496,0.03211726],"genre_scores_gemma":[0.6629141,0.12831262,0.18827936,0.0010500283,0.00070121844,0.00030288086,0.00036674918,0.00023243365,0.017840652],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997825,0.00009132312,0.000012672921,0.000027502616,0.000052391115,0.000033561857],"domain_scores_gemma":[0.9995278,0.00025451396,0.000026914033,0.0000766097,0.00006830391,0.00004592688],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017106648,0.00041437874,0.00046392574,0.00081335264,0.0010485871,0.0005717106,0.0010387191,0.0011501822,0.0015217084],"category_scores_gemma":[0.000596268,0.0005930965,0.00035838402,0.00043538312,0.0015266619,0.0017522292,0.00097550894,0.0021585166,0.00078212144],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006233395,0.0002658031,0.0026860938,0.0019305018,0.000082665414,0.001392631,0.00062797684,0.0037454176,0.82448924,0.10278131,0.004923273,0.05645178],"study_design_scores_gemma":[0.0002268564,0.0010373711,0.023733348,0.0014527016,0.00014116321,0.009114743,0.00090683566,0.028621819,0.64342475,0.08004702,0.21111152,0.00018189162],"about_ca_topic_score_codex":0.0022369865,"about_ca_topic_score_gemma":0.0025935094,"teacher_disagreement_score":0.0022369865,"about_ca_system_score_codex":0.00086433935,"about_ca_system_score_gemma":0.00046739797,"threshold_uncertainty_score":0.009046972},"labels":[],"label_agreement":null},{"id":"W4401905222","doi":"10.1007/978-1-0716-4108-8_13","title":"DNA PAMPs as Molecular Tools for the cGAS-STING Signaling Pathways","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Innate immune system; Biology; Stimulator of interferon genes; Pattern recognition receptor; Sting; Cell biology; RIG-I; Context (archaeology); Pathogen-associated molecular pattern; Immunity; DNA; Immune system; Immunology; Genetics","score_opus":0.046973180365442,"score_gpt":0.39251673331408177,"score_spread":0.34554355294863975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905222","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.70684135,0.022582097,0.24507378,0.0025486527,0.0011851058,0.0005023479,0.0014340279,0.0019659372,0.017866664],"genre_scores_gemma":[0.8961648,0.0052246605,0.08945026,0.00035344993,0.000084292835,0.0003479785,0.00047405026,0.000082373495,0.0078180935],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99971026,0.00007881674,0.00001244479,0.000047425285,0.00009322678,0.00005786485],"domain_scores_gemma":[0.9998642,0.00004339127,0.000028209266,0.000021526377,0.0000101791,0.000032469874],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037698488,0.00052345527,0.00026512842,0.0003517012,0.0002716245,0.00054855715,0.0003677513,0.0005415564,0.0019193937],"category_scores_gemma":[0.00035278808,0.00023726535,0.00027575562,0.0002137475,0.00043770662,0.00057022605,0.0006216037,0.001990601,0.0006479649],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017973008,0.00003395834,0.00006253123,0.00012940571,0.000005868193,0.0000759703,0.000024507232,0.0003709143,0.98428106,0.0051726284,0.00024418265,0.009419167],"study_design_scores_gemma":[0.000020552705,0.00014195559,0.00015866359,0.000012334274,0.000006046946,0.00013181678,0.000012680498,0.0016348591,0.99063677,0.0009794937,0.0062559512,0.000008940054],"about_ca_topic_score_codex":0.00016484571,"about_ca_topic_score_gemma":0.00028910654,"teacher_disagreement_score":0.0019193937,"about_ca_system_score_codex":0.0005589805,"about_ca_system_score_gemma":0.00032257917,"threshold_uncertainty_score":0.00642097},"labels":[],"label_agreement":null},{"id":"W4401905224","doi":"10.1007/978-1-0716-4108-8_11","title":"Application of Proteomics Technology Based on LC-MS Combined with Western Blotting and Co-IP in Antiviral Innate Immunity","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Proteomics; Innate immune system; Proteome; Biology; Immune system; Quantitative proteomics; Acquired immune system; Interferon; Computational biology; Immunology; Bioinformatics; Biochemistry","score_opus":0.010370589175085931,"score_gpt":0.3460673469763449,"score_spread":0.33569675780125896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905224","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31528097,0.030643124,0.63550234,0.0018904726,0.0012894117,0.0005185119,0.0024977478,0.0032304397,0.009147014],"genre_scores_gemma":[0.4768259,0.013397602,0.4983875,0.001062651,0.00053079607,0.0007587765,0.0026478043,0.00050838327,0.0058806324],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990484,0.00019051,0.00006915896,0.00032028195,0.00024795276,0.0001236732],"domain_scores_gemma":[0.9996445,0.000099163226,0.000039578554,0.00006393173,0.0001083569,0.000044477725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012732622,0.0014430713,0.0013633053,0.0015911721,0.00092282443,0.0012814361,0.001029701,0.0010051841,0.0016271058],"category_scores_gemma":[0.0005039342,0.0007430628,0.0009786427,0.0011006319,0.00054796215,0.001597373,0.0009078796,0.0019020475,0.0011139935],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007321508,0.000047820307,0.0001724728,0.00017598175,0.000031937474,0.000039556016,0.0000107731585,0.000083889565,0.99160016,0.0003268941,0.00021969856,0.0072176084],"study_design_scores_gemma":[0.00002130141,0.0001276903,0.0033702026,0.00002007233,0.000108517335,0.0006435946,0.000029676214,0.00887668,0.9794241,0.0010648711,0.0062705493,0.000042780925],"about_ca_topic_score_codex":0.00041662037,"about_ca_topic_score_gemma":0.00066395925,"teacher_disagreement_score":0.0016271058,"about_ca_system_score_codex":0.0005346643,"about_ca_system_score_gemma":0.0006769719,"threshold_uncertainty_score":0.0067337155},"labels":[],"label_agreement":null},{"id":"W4401905230","doi":"10.1007/978-1-0716-4108-8_2","title":"A Guideline Strategy for Identifying a Viral Gene/Protein Evading Antiviral Innate Immunity","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Innate immune system; Biology; Interferon; Immunity; Intrinsic immunity; Endoplasmic reticulum; Virology; Acquired immune system; Gene; Immune system; Immunology; Cell biology; Genetics","score_opus":0.059118880664371896,"score_gpt":0.4431482218500036,"score_spread":0.3840293411856317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905230","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.042831197,0.004820256,0.90953827,0.0052272086,0.0010865629,0.002301072,0.0014256507,0.00287732,0.029892456],"genre_scores_gemma":[0.085388735,0.0060805944,0.87538856,0.0026779666,0.00014506126,0.0018092351,0.0017168622,0.00031117158,0.026481861],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9990257,0.00019598304,0.00009987112,0.00019344334,0.0003722543,0.000112728885],"domain_scores_gemma":[0.9993438,0.00008234452,0.00005646997,0.00013440303,0.0003004157,0.00008250417],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013019701,0.0016959502,0.0011685848,0.001748107,0.0012666627,0.0018398233,0.0017908828,0.0021675248,0.004079176],"category_scores_gemma":[0.001183406,0.0007455955,0.0010338628,0.0009899314,0.0009337505,0.0015251291,0.0014398935,0.002533983,0.004580432],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014620753,0.00019637258,0.0006095848,0.00045175102,0.000036397334,0.00046318458,0.000119655204,0.0012697098,0.872045,0.0270752,0.009594103,0.087992884],"study_design_scores_gemma":[0.000087884226,0.0005724042,0.0010985828,0.00016203121,0.00013192455,0.0012312675,0.00023615433,0.010154921,0.82900757,0.02155587,0.13566698,0.00009446494],"about_ca_topic_score_codex":0.0019793126,"about_ca_topic_score_gemma":0.0042934865,"teacher_disagreement_score":0.004079176,"about_ca_system_score_codex":0.0011714736,"about_ca_system_score_gemma":0.0031113368,"threshold_uncertainty_score":0.013646185},"labels":[],"label_agreement":null},{"id":"W4401905240","doi":"10.1007/978-1-0716-4108-8_12","title":"Identifying RNA Sensors in Antiviral Innate Immunity","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Innate immune system; RNA; Biology; Pattern recognition receptor; Virology; RIG-I; Nucleic acid; Virus; Pathogen; Immunity; RNA virus; TLR7; Context (archaeology); Immune system; Toll-like receptor; Immunology; Gene; Genetics","score_opus":0.030909092347531458,"score_gpt":0.40534451963869084,"score_spread":0.37443542729115936,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905240","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48798907,0.048524007,0.4257157,0.0046409136,0.0014099753,0.00046354684,0.0018162582,0.0013172431,0.028123181],"genre_scores_gemma":[0.74387,0.018879365,0.21124382,0.0013222316,0.0004215411,0.00059185224,0.0020251242,0.00022849347,0.02141756],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997212,0.000064038184,0.000016404196,0.00005523164,0.00009751219,0.00004552226],"domain_scores_gemma":[0.9998684,0.00005421041,0.000016302487,0.000023913428,0.000019032801,0.00001802065],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008400493,0.00066862744,0.0005579596,0.00081258337,0.00039919713,0.0012688151,0.0006655139,0.001019094,0.002209626],"category_scores_gemma":[0.00051635545,0.0004116597,0.00045136915,0.00036479987,0.00057665457,0.001572275,0.00069683837,0.0015944237,0.0014632648],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026947883,0.000051641586,0.00042417215,0.00019222141,0.000010719347,0.00007244975,0.00005005785,0.000506442,0.9416036,0.018337067,0.00086711237,0.03761508],"study_design_scores_gemma":[0.00003953861,0.0001557778,0.0009857311,0.00004775593,0.000016778591,0.00024392703,0.00007813966,0.008428145,0.9420906,0.017316865,0.030574147,0.000022698292],"about_ca_topic_score_codex":0.00014647766,"about_ca_topic_score_gemma":0.00028076692,"teacher_disagreement_score":0.002209626,"about_ca_system_score_codex":0.00062265317,"about_ca_system_score_gemma":0.0003665284,"threshold_uncertainty_score":0.007391989},"labels":[],"label_agreement":null},{"id":"W4401905262","doi":"10.1007/978-1-0716-4108-8_1","title":"A Guideline Strategy for Identifying Genes/Proteins Regulating Antiviral Innate Immunity","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Innate immune system; Ubiquitin; Ubiquitin ligase; Interferon; Biology; Interferon regulatory factors; Signal transduction; Cell biology; Gene; Stimulator of interferon genes; Computational biology; Genetics; Receptor","score_opus":0.06512919121542797,"score_gpt":0.4432405602897405,"score_spread":0.37811136907431253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905262","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.048490345,0.0029167992,0.9102191,0.0031099173,0.00064161257,0.0031410072,0.006978252,0.004673644,0.019829316],"genre_scores_gemma":[0.038405273,0.0024223423,0.9333074,0.0017089482,0.00006045403,0.0016110032,0.008323476,0.00042255566,0.013738485],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9990301,0.0001915031,0.000120634446,0.0002233935,0.00031542615,0.000118841],"domain_scores_gemma":[0.9990206,0.0001487727,0.0000631689,0.00024015816,0.00043147334,0.00009594538],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011850095,0.0016259251,0.0013363073,0.0020427182,0.0013608081,0.0015339267,0.0016203785,0.0016472616,0.0048713894],"category_scores_gemma":[0.0014814361,0.0007791607,0.0014201988,0.0016946977,0.00065941596,0.0009678238,0.0010389077,0.0023794465,0.005913967],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021386758,0.00016362898,0.0011870846,0.00048622472,0.00004842231,0.0004150344,0.00011181569,0.00080853724,0.9013016,0.009690361,0.011812219,0.073761106],"study_design_scores_gemma":[0.00012479739,0.00051229936,0.0050510345,0.00021011663,0.00025702128,0.0015438009,0.00034871887,0.008391487,0.7871257,0.013120843,0.18321764,0.00009653054],"about_ca_topic_score_codex":0.0038705012,"about_ca_topic_score_gemma":0.009447514,"teacher_disagreement_score":0.0048713894,"about_ca_system_score_codex":0.000923679,"about_ca_system_score_gemma":0.0034668269,"threshold_uncertainty_score":0.016296446},"labels":[],"label_agreement":null},{"id":"W4401905272","doi":"10.1007/978-1-0716-4108-8_4","title":"Identifying an Abnormal Phosphorylated Adaptor by Viral Kinase Using Mass Spectrometry","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Immunoprecipitation; Phosphorylation; Mass spectrometry; Signal transducing adaptor protein; Fragmentation (computing); Chemistry; Protein phosphorylation; Kinase; Computational biology; Cell biology; Biology; Molecular biology; Protein kinase A; Biochemistry; Chromatography; Gene","score_opus":0.02544217286245426,"score_gpt":0.38448930453070973,"score_spread":0.35904713166825547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905272","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97363317,0.0010083037,0.022656789,0.00022453081,0.00011715193,0.000038953953,0.00037912242,0.0002667117,0.0016754182],"genre_scores_gemma":[0.97633785,0.00064424454,0.02054815,0.00015084322,0.00002765082,0.000034722274,0.00059863,0.000046629906,0.0016113275],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997929,0.000019342497,0.000015056842,0.00006144864,0.00007143281,0.000039926406],"domain_scores_gemma":[0.99982303,0.00002997887,0.00006198516,0.000023359727,0.000027843518,0.00003381294],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003107263,0.00053159834,0.00029849412,0.0005374131,0.00032751838,0.00064397795,0.00046490427,0.0007583647,0.000897666],"category_scores_gemma":[0.00037157847,0.00019410133,0.00032798774,0.00029918048,0.00025848014,0.00059027394,0.00040210516,0.00085192674,0.00043401239],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018361767,0.000023530914,0.0010396971,0.000031754786,0.000017278298,0.00022821839,0.000014976814,0.00011341522,0.994624,0.00051623245,0.00008269322,0.0031246203],"study_design_scores_gemma":[0.000022856859,0.00012350257,0.00558426,0.000009201336,0.000036378176,0.0020059193,0.000047395795,0.008330904,0.9802833,0.00070211315,0.002834365,0.00001965756],"about_ca_topic_score_codex":0.00028663562,"about_ca_topic_score_gemma":0.0002833342,"teacher_disagreement_score":0.000897666,"about_ca_system_score_codex":0.00043036547,"about_ca_system_score_gemma":0.00020079194,"threshold_uncertainty_score":0.0031225085},"labels":[],"label_agreement":null},{"id":"W4401905299","doi":"10.1007/978-1-0716-4108-8_24","title":"Identifying a Gene Deficiency in the Antiviral Innate Immune Signaling Pathway","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Innate immune system; Biology; Interferon; Intrinsic immunity; Signal transduction; Immune system; Pattern recognition receptor; Immunology; Enhancer; Interferon regulatory factors; Immunity; Innate lymphoid cell; Gene; Cell biology; Transcription factor; Genetics","score_opus":0.0307448738650364,"score_gpt":0.3774792791898959,"score_spread":0.3467344053248595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905299","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97502273,0.0006918196,0.019112978,0.00053403317,0.00015655259,0.00011588355,0.0022841492,0.00033131312,0.0017505507],"genre_scores_gemma":[0.98373556,0.0003578294,0.011557454,0.00025146158,0.000025205187,0.00008993647,0.0012432041,0.00013411975,0.00260523],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99971133,0.000037534315,0.000042534422,0.00009596284,0.00006432363,0.0000482295],"domain_scores_gemma":[0.99959785,0.00015533804,0.00008590977,0.000042323936,0.000031481857,0.000087118795],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020796696,0.0007997837,0.0005038057,0.00085144996,0.00022188261,0.00042961107,0.0005617627,0.00083714986,0.0030717023],"category_scores_gemma":[0.00045175184,0.00022707238,0.00049682,0.00027601153,0.0006984866,0.00022723588,0.00036000475,0.0008380804,0.00061774766],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001361053,0.00003259161,0.00051017804,0.00002099496,0.000012141081,0.0004423146,0.0000103132725,0.00011349151,0.9971162,0.00033714052,0.00007016524,0.0011984189],"study_design_scores_gemma":[0.00006691303,0.00024944995,0.006306746,0.000013408117,0.00008172244,0.00403024,0.0000507283,0.0024185374,0.9832261,0.00034274062,0.003200384,0.000013058357],"about_ca_topic_score_codex":0.0005067009,"about_ca_topic_score_gemma":0.0005178733,"teacher_disagreement_score":0.0030717023,"about_ca_system_score_codex":0.00030990297,"about_ca_system_score_gemma":0.0003708751,"threshold_uncertainty_score":0.010275841},"labels":[],"label_agreement":null},{"id":"W4401954734","doi":"10.1128/jvi.00869-24","title":"ISGylation of the SARS-CoV-2 N protein by HERC5 impedes N oligomerization and thereby viral RNA synthesis","year":2024,"lang":"en","type":"article","venue":"Journal of Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Cleveland Clinic","keywords":"ISG15; Biology; Coronavirus; Interferon; Viral replication; Viral structural protein; Virology; Nidovirales; Virus; Cell biology; Viral protein; Ubiquitin; Gene; Viral entry; Biochemistry","score_opus":0.009432096179413901,"score_gpt":0.25064854702313033,"score_spread":0.24121645084371643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401954734","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99739325,0.0003225322,0.0013342472,0.00004781817,0.0000104410665,0.0000084222675,0.00007655341,0.000021946666,0.0007847813],"genre_scores_gemma":[0.99788576,0.000095578995,0.0007682721,0.000030879848,0.0000017042747,0.000005017413,0.000175903,0.000004954383,0.0010319384],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998957,0.000013355634,0.000008338882,0.000023437922,0.00002661585,0.00003263509],"domain_scores_gemma":[0.99994063,0.000006933777,0.000018348612,0.000008610819,0.0000076253073,0.000017884227],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000104595536,0.00023978516,0.00017619626,0.00008407762,0.0001487413,0.00018896458,0.00016170176,0.00020614061,0.0009895916],"category_scores_gemma":[0.00008049602,0.0000811496,0.0002376312,0.000067999026,0.00020214543,0.00015163084,0.00016937377,0.00033303708,0.00017499845],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011453162,0.000026211437,0.00039335308,0.000022008995,0.000006173532,0.000044698703,0.000006906857,0.00015961443,0.9981895,0.00015492286,0.000036980127,0.0008450217],"study_design_scores_gemma":[0.0000074075087,0.00010188556,0.0026093675,0.0000021897808,0.000005358487,0.00011345222,0.00001142515,0.002105678,0.99398583,0.00002106696,0.0010340055,0.0000023921734],"about_ca_topic_score_codex":0.0015982122,"about_ca_topic_score_gemma":0.0018709948,"teacher_disagreement_score":0.0015982122,"about_ca_system_score_codex":0.00048581153,"about_ca_system_score_gemma":0.00029310415,"threshold_uncertainty_score":0.0035247803},"labels":[],"label_agreement":null},{"id":"W4402266746","doi":"10.1158/1538-7445.pediatric24-b064","title":"Abstract B064: Uncovering the lineage state specific regulation of STING in neuroblastoma","year":2024,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Sting; Lineage (genetic); Neuroblastoma; Biology; Cancer research; Medicine; Genetics; Gene; Engineering","score_opus":0.06547823583930773,"score_gpt":0.37298489271447316,"score_spread":0.30750665687516543,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402266746","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98954064,0.0015929288,0.005143315,0.000097537595,0.000017763557,0.00003599154,0.0018706905,0.00012322512,0.0015778098],"genre_scores_gemma":[0.9855136,0.0014130021,0.006566516,0.00007875638,0.000006232861,0.000038782422,0.00220873,0.000032587635,0.0041418425],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993145,0.0000050774743,0.000005549161,0.000019656978,0.000026761703,0.000011399698],"domain_scores_gemma":[0.999943,0.000007781708,0.00001948137,0.0000074570935,0.00000977692,0.00001258078],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009500617,0.00017047425,0.0001950795,0.00024806685,0.00012866485,0.00021824062,0.00016892554,0.00020626705,0.0017074838],"category_scores_gemma":[0.0000987051,0.00012685746,0.00019182597,0.00014912088,0.00015827948,0.0001404185,0.00018748915,0.00042109416,0.00041915794],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029518742,0.0000040207956,0.0004088512,0.000015785814,0.0000019036161,0.00001780336,0.000007740928,0.000034244462,0.9985245,0.000025797632,0.00001716717,0.00091268634],"study_design_scores_gemma":[0.0000057302727,0.00015737659,0.030619884,0.000009354774,0.000020749369,0.0003280004,0.00004364356,0.0012252675,0.9642442,0.00006970922,0.003269877,0.0000062565623],"about_ca_topic_score_codex":0.0017605921,"about_ca_topic_score_gemma":0.0036495065,"teacher_disagreement_score":0.0017605921,"about_ca_system_score_codex":0.00038724163,"about_ca_system_score_gemma":0.00027603103,"threshold_uncertainty_score":0.0057121515},"labels":[],"label_agreement":null},{"id":"W4402266827","doi":"10.1158/1538-7445.pediatric24-b054","title":"Abstract B054: Intratumoral injection with stimulator of interferon genes (STING) agonist increases T- and B-cell infiltrates in canine osteosarcoma","year":2024,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Stimulator of interferon genes; Osteosarcoma; Sting; Agonist; Medicine; Cancer research; Interferon; Internal medicine; Immunology; Receptor; Innate immune system","score_opus":0.0324861786801544,"score_gpt":0.33947756461502215,"score_spread":0.30699138593486774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402266827","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975975,0.0005545752,0.0007382883,0.00006493347,0.000018699055,0.00003388391,0.00022383992,0.0000541056,0.00071429275],"genre_scores_gemma":[0.9950422,0.00030906455,0.001410172,0.00005742288,0.000016390151,0.00005858667,0.00070347765,0.000022471302,0.0023802384],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998554,0.000019491368,0.000010020656,0.000034751563,0.000037857397,0.00004243832],"domain_scores_gemma":[0.99986744,0.00002222918,0.000036495803,0.000011724371,0.000017570479,0.000044606553],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016566462,0.00019482168,0.0002541547,0.0004774796,0.00012620809,0.00025740027,0.00011311945,0.0002504254,0.0016062955],"category_scores_gemma":[0.00010074819,0.00015562624,0.00018655331,0.0001466476,0.0002797369,0.00018579283,0.000102092185,0.00043636747,0.00036904038],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006377609,0.00019752221,0.00076279015,0.000030412844,0.0000069319,0.00003904845,0.000023747996,0.00008161207,0.99662954,0.000028559847,0.00010879155,0.0014533496],"study_design_scores_gemma":[0.000118068514,0.009195392,0.014138764,0.000009877679,0.00005044253,0.0004679575,0.00012815716,0.001666756,0.971348,0.000047206264,0.0028212315,0.000008123236],"about_ca_topic_score_codex":0.0010617272,"about_ca_topic_score_gemma":0.002235682,"teacher_disagreement_score":0.0016062955,"about_ca_system_score_codex":0.0003153458,"about_ca_system_score_gemma":0.00018788177,"threshold_uncertainty_score":0.0053735375},"labels":[],"label_agreement":null},{"id":"W4402363619","doi":"10.1002/bies.202400173","title":"Beyond RNAi: How the Dicer protein modulates the antiviral innate immune response in mammalian cells","year":2024,"lang":"en","type":"article","venue":"BioEssays","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"School of Medicine, New York University; National Institutes of Health; Centre National de la Recherche Scientifique; Agence Nationale de la Recherche; York University; Université de Strasbourg; Fondation pour la Recherche Médicale; Institut National de la Santé et de la Recherche Médicale","keywords":"Dicer; RNA interference; Biology; Innate immune system; Cell biology; microRNA; Immune system; Ribonuclease III; RNA silencing; Interferon; RNA; Genetics; Gene","score_opus":0.011250107146492605,"score_gpt":0.233944796778665,"score_spread":0.2226946896321724,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402363619","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.68244207,0.17079662,0.10060316,0.0063789007,0.0013073066,0.00015586459,0.000704966,0.000931917,0.036679275],"genre_scores_gemma":[0.9524344,0.025879405,0.01201027,0.0012364873,0.00022508124,0.00004599087,0.00020068437,0.00007324173,0.007894312],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99973947,0.000067450484,0.000026592663,0.000065486136,0.00006227249,0.000038702725],"domain_scores_gemma":[0.99990594,0.000017740815,0.000018958553,0.000018463687,0.000016690052,0.000022236014],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052047806,0.00025507354,0.00041420315,0.00020087388,0.0003455196,0.0010501978,0.00026513322,0.00047966445,0.00088985695],"category_scores_gemma":[0.00026329455,0.00015576476,0.00026090012,0.0001344799,0.00057195505,0.00116068,0.00037287187,0.00077928696,0.00041945372],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058673053,0.000007379177,0.00025498908,0.00015998774,0.000012015959,0.0001431721,0.00007230618,0.00014400853,0.986685,0.0030011998,0.00025111897,0.009210176],"study_design_scores_gemma":[0.00003358314,0.00036566466,0.00881225,0.000088380446,0.00006525273,0.0015418977,0.00021095683,0.0022405337,0.919769,0.004704162,0.06213075,0.00003758853],"about_ca_topic_score_codex":0.00022504547,"about_ca_topic_score_gemma":0.00037587495,"teacher_disagreement_score":0.0010501978,"about_ca_system_score_codex":0.00043504252,"about_ca_system_score_gemma":0.00025135785,"threshold_uncertainty_score":0.0031564236},"labels":[],"label_agreement":null},{"id":"W4402490805","doi":"10.12688/f1000research.155929.1","title":"A guide to selecting high-performing antibodies for STING1 (Uniprot ID: Q86WV6) for use in western blot, immunoprecipitation, and immunofluorescence","year":2024,"lang":"en","type":"preprint","venue":"F1000Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"Mitacs; Ontario Genomics; Genome Canada","keywords":"Immunoprecipitation; Western blot; Immunofluorescence; Open peer review; Antibody; UniProt; Plant biology; Biology; Computational biology; Immunology; Biochemistry; Gene; Botany","score_opus":0.04674245767213634,"score_gpt":0.37116040180696674,"score_spread":0.3244179441348304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402490805","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.010330168,0.016095355,0.40360162,0.008550975,0.0040630526,0.0068620997,0.31398818,0.15902069,0.07748795],"genre_scores_gemma":[0.007672831,0.00932232,0.6052386,0.0037111542,0.0007852008,0.011655285,0.2729471,0.035607677,0.053059787],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9963463,0.0010435621,0.000729886,0.00046360496,0.001058654,0.00035811192],"domain_scores_gemma":[0.9924321,0.002824522,0.00050548883,0.0016112525,0.00203525,0.0005912728],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00552247,0.0039877645,0.003830012,0.006507906,0.0020152759,0.0029605266,0.005285411,0.0028424123,0.17893592],"category_scores_gemma":[0.012518096,0.0044925413,0.0020099585,0.004608078,0.0009683528,0.0026823222,0.0022276444,0.004687305,0.26870254],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009440812,0.00020402977,0.00081048347,0.0034950436,0.00014019539,0.0005873601,0.00022409872,0.0004000964,0.1585423,0.002613597,0.75505805,0.07698068],"study_design_scores_gemma":[0.00025057976,0.00016411232,0.0026550544,0.00045056082,0.000067056615,0.0012911339,0.00007205137,0.0007550524,0.038681734,0.0024385732,0.95307773,0.000096277385],"about_ca_topic_score_codex":0.0015677962,"about_ca_topic_score_gemma":0.0050156284,"teacher_disagreement_score":0.17893592,"about_ca_system_score_codex":0.0011975819,"about_ca_system_score_gemma":0.0025809251,"threshold_uncertainty_score":0.59860027},"labels":[],"label_agreement":null},{"id":"W4402516646","doi":"10.1089/jir.2024.43579.rfs2023","title":"Rosalind Franklin Society Proudly Announces the 2023 Award Recipient for <i>Journal of Interferon and Cytokine Research</i>","year":2024,"lang":"en","type":"editorial","venue":"Journal of Interferon & Cytokine Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Interferon; Environmental ethics; Medicine; Library science; Political science; Immunology; Philosophy; Computer science","score_opus":0.0618021533568062,"score_gpt":0.3998518245245325,"score_spread":0.3380496711677263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402516646","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000035411656,0.00235718,0.00008193985,0.047825847,0.9474366,0.000016957625,0.000038114074,0.00004143336,0.0021665795],"genre_scores_gemma":[0.00081128685,0.0046388027,0.00019049813,0.07080302,0.88280183,0.000037422404,0.0000708383,0.00008025684,0.04056603],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9955514,0.0004676972,0.00029714868,0.0004423801,0.0027850517,0.00045622647],"domain_scores_gemma":[0.98746896,0.0027644257,0.0008540526,0.00027964741,0.0046876795,0.0039453288],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.007647643,0.0036347397,0.003077293,0.0035966958,0.00379127,0.009155484,0.0030714015,0.017844634,0.017844843],"category_scores_gemma":[0.015106857,0.0012381674,0.0029142739,0.0010182036,0.0017631197,0.0030957637,0.0019681295,0.024252998,0.01721072],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031059,0.000012795329,0.00002454175,0.00003912892,0.000009206625,0.00008043325,0.00000485236,0.000010771213,0.00005258281,0.00022255335,0.99688405,0.0026279863],"study_design_scores_gemma":[0.000066064335,0.000048318212,0.00032055195,0.00013219894,0.000038932114,0.0001041477,0.000052030144,0.0001097705,0.00012588289,0.0007641127,0.9982175,0.000020521496],"about_ca_topic_score_codex":0.0030812668,"about_ca_topic_score_gemma":0.0117487125,"teacher_disagreement_score":0.017844843,"about_ca_system_score_codex":0.002923561,"about_ca_system_score_gemma":0.004672324,"threshold_uncertainty_score":0.059696972},"labels":[],"label_agreement":null},{"id":"W4402740483","doi":"10.1073/pnas.2402983121","title":"A sensitive assay for measuring whole-blood responses to type I IFNs","year":2024,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Center for Advancing Translational Sciences; Stavros Niarchos Foundation; Hospital for Sick Children; Meyer Foundation; Assistance publique-Hôpitaux de Paris; CHIST-ERA; National Institute of Allergy and Infectious Diseases; Agence Nationale de la Recherche; Fisher Center for Alzheimer's Research Foundation; King Abdulaziz City for Science and Technology; Centre National de la Recherche Scientifique; Università degli Studi di Pavia; King Abdullah University of Science and Technology; Fondation du Souffle; Institut National de la Santé et de la Recherche Médicale; Assistance Publique - Hôpitaux de Paris; European Commission; Institut des maladies génétiques Imagine; Ministère de l'Enseignement supérieur, de la Recherche et de l'Innovation; Fondation pour la Recherche Médicale; JPB Foundation; SCOR Corporate Foundation for Science; National Institutes of Health; HORIZON EUROPE Framework Programme; Fondation Bettencourt Schueller; Howard Hughes Medical Institute","keywords":"Monoclonal antibody; Whole blood; Interferon; Receptor; Immunology; Antibody; Immunity; Blocking antibody; Monoclonal; Interferon type I; Virology; Biology; Medicine; Immune system; Genetics","score_opus":0.06182832135366701,"score_gpt":0.3266055012399109,"score_spread":0.2647771798862439,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402740483","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19896397,0.014228238,0.75689554,0.0008246569,0.0018779052,0.0019385671,0.00667423,0.0036024107,0.014994449],"genre_scores_gemma":[0.42794412,0.00880502,0.515845,0.0016729729,0.001343003,0.0050119497,0.012472963,0.00037697662,0.026528008],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9950749,0.001788667,0.00037033673,0.0009091535,0.0015715926,0.000285275],"domain_scores_gemma":[0.9977112,0.00093413016,0.0003120115,0.00039083205,0.00034111872,0.00031079687],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018679695,0.002548989,0.0010820698,0.0024520797,0.00045064065,0.0011449935,0.0015768643,0.0027328297,0.004242951],"category_scores_gemma":[0.0021626903,0.0008371645,0.0007576737,0.0012281869,0.0008380001,0.00081190077,0.0010626069,0.0029302195,0.004139136],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020172742,0.0002452396,0.0017901032,0.0002329187,0.000040047013,0.00006600704,0.000053374304,0.000072291026,0.9886376,0.00034643046,0.0006665632,0.0076475292],"study_design_scores_gemma":[0.00014830483,0.0022991565,0.017522937,0.00015517406,0.00021683265,0.002229583,0.00012798155,0.0037250917,0.95635176,0.0011629001,0.01599154,0.000068641304],"about_ca_topic_score_codex":0.00025364902,"about_ca_topic_score_gemma":0.000420076,"teacher_disagreement_score":0.004242951,"about_ca_system_score_codex":0.0003563654,"about_ca_system_score_gemma":0.0005087943,"threshold_uncertainty_score":0.014194131},"labels":[],"label_agreement":null},{"id":"W4402797767","doi":"10.1097/01.tp.0001065064.00602.1f","title":"264.6: Simultaneous snRNA&amp;ATACseq characterizes specific innate immune memory.","year":2024,"lang":"en","type":"article","venue":"Transplantation","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Innate immune system; Immunological memory; Immune system; Neuroscience; Biology; Immunology; Immunity","score_opus":0.016589467979550257,"score_gpt":0.2560018428173261,"score_spread":0.23941237483777583,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402797767","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99450773,0.0005129519,0.003119027,0.000037459784,0.000022148304,0.000014505916,0.00083144277,0.00005626019,0.00089838513],"genre_scores_gemma":[0.9926293,0.00014848994,0.0027886322,0.00007574171,0.000011120741,0.000028335126,0.0019991684,0.000038997565,0.0022802465],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998605,0.00001270844,0.000009384523,0.00005669688,0.00003343464,0.000027107304],"domain_scores_gemma":[0.99988747,0.000011410857,0.00004438242,0.000012975034,0.000013137799,0.00003068487],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011696673,0.00026389444,0.0002210009,0.0002170149,0.00020070655,0.00025153955,0.000116991054,0.00022620823,0.0026968764],"category_scores_gemma":[0.0001274003,0.00011478485,0.0001962631,0.00019079752,0.00023422982,0.00010115096,0.00022719843,0.00028226513,0.000904118],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019329035,0.000008579421,0.0013013182,0.000018426532,0.0000040215227,0.000032534055,0.0000090136145,0.000018782404,0.99745435,0.00002212091,0.00003942546,0.0008981219],"study_design_scores_gemma":[0.000030571748,0.0006850581,0.11954063,0.000014595923,0.000056180197,0.0016247771,0.000109064065,0.0013066854,0.8721666,0.00014754101,0.00430819,0.000010166881],"about_ca_topic_score_codex":0.00027574983,"about_ca_topic_score_gemma":0.0006613526,"teacher_disagreement_score":0.0026968764,"about_ca_system_score_codex":0.0001695735,"about_ca_system_score_gemma":0.000108088105,"threshold_uncertainty_score":0.009021938},"labels":[],"label_agreement":null},{"id":"W4403027926","doi":"10.2139/ssrn.4962613","title":"Proteomic and Cytokine Profiling of a Ctrp8-Rxfp1 Glioma Mouse Model","year":2024,"lang":"en","type":"preprint","venue":"SSRN Electronic Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Profiling (computer programming); Glioma; Cytokine; Computational biology; Biology; Cancer research; Immunology; Computer science; Operating system","score_opus":0.010329644283291941,"score_gpt":0.2528364174018217,"score_spread":0.24250677311852978,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403027926","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9806996,0.0019166053,0.007257294,0.00034290072,0.00013617545,0.000079393256,0.006928512,0.00033694814,0.0023026469],"genre_scores_gemma":[0.9698687,0.0018573145,0.007841018,0.00036675693,0.000059584167,0.00021009844,0.006031767,0.00024481656,0.013519972],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999793,0.000010627661,0.000011215738,0.0000623151,0.00008019262,0.0000426296],"domain_scores_gemma":[0.99981695,0.00001647678,0.000054971286,0.000017534607,0.00002598193,0.000068138215],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015052765,0.00054383936,0.00033008694,0.00089783536,0.00021798897,0.00041648775,0.00026571323,0.0005705701,0.0020272685],"category_scores_gemma":[0.00010671016,0.00018256441,0.00039915144,0.00039376813,0.000318427,0.00030302425,0.00020077739,0.0012551688,0.0010412565],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034648736,0.000031555002,0.00027056926,0.000025943367,0.000011226008,0.00010049633,0.000011755504,0.000045394496,0.9981179,0.00006222511,0.00012084483,0.00085570995],"study_design_scores_gemma":[0.000048553633,0.00059153757,0.013105938,0.00001470749,0.000105878076,0.0013555237,0.000092906084,0.0010466836,0.97915727,0.00021695309,0.004245595,0.000018494571],"about_ca_topic_score_codex":0.00057913485,"about_ca_topic_score_gemma":0.00070688373,"teacher_disagreement_score":0.0020272685,"about_ca_system_score_codex":0.00031444308,"about_ca_system_score_gemma":0.00018830432,"threshold_uncertainty_score":0.006781876},"labels":[],"label_agreement":null},{"id":"W4403192101","doi":"10.1038/s41467-024-53071-1","title":"Publisher Correction: Translation efficiency driven by CNOT3 subunit of the CCR4-NOT complex promotes leukemogenesis","year":2024,"lang":"en","type":"erratum","venue":"Nature Communications","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Genome British Columbia; Terry Fox Research Institute; University of British Columbia","funders":"","keywords":"Translation (biology); Protein subunit; Computer science; Computational biology; Cell biology; Chemistry; Biology; Biochemistry","score_opus":0.029796325859158153,"score_gpt":0.2861939207277024,"score_spread":0.25639759486854424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403192101","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00041100453,0.0010561949,0.0010334436,0.026632534,0.9663367,0.000014553535,0.0005845718,0.00030259494,0.0036283513],"genre_scores_gemma":[0.04859814,0.014035571,0.012793502,0.07415674,0.3821782,0.00023656804,0.0048592114,0.0028955636,0.4602466],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977028,0.0002966615,0.00042440774,0.00036166506,0.0010016223,0.00021288401],"domain_scores_gemma":[0.98702186,0.004129208,0.00083941815,0.0009367249,0.006523999,0.00054878136],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001971267,0.0018692759,0.0015248763,0.0026096138,0.0026933197,0.0028736566,0.00281251,0.005298597,0.03338051],"category_scores_gemma":[0.022047358,0.0010107553,0.001131876,0.0020020544,0.0019839061,0.0017939755,0.0013757272,0.008990419,0.023505982],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007855125,0.000014760174,0.00012238919,0.00023390542,0.000020779658,0.0012173249,0.00006241294,0.00010481149,0.0005170355,0.0018158425,0.98306113,0.012751028],"study_design_scores_gemma":[0.000031417996,0.000029914061,0.0007560795,0.00018423359,0.000046222616,0.001654969,0.00008053354,0.0003642616,0.002315657,0.0014240787,0.993071,0.000041594583],"about_ca_topic_score_codex":0.007182181,"about_ca_topic_score_gemma":0.008060154,"teacher_disagreement_score":0.03338051,"about_ca_system_score_codex":0.0026720783,"about_ca_system_score_gemma":0.0023639323,"threshold_uncertainty_score":0.111668944},"labels":[],"label_agreement":null},{"id":"W4403207135","doi":"10.1212/01.wnl.0001050880.76694.bf","title":"Research on Prediction Model of Severe Autoimmune Encephalitis","year":2024,"lang":"en","type":"article","venue":"Neurology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Sanofi Genzyme; EMD Serono; Alexion Pharmaceuticals; Celgene; Sanofi; Biogen; Bristol-Myers Squibb","keywords":"Autoimmune encephalitis; Medicine; Encephalitis; Virology; Virus","score_opus":0.04679430721259274,"score_gpt":0.32235845145726144,"score_spread":0.2755641442446687,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403207135","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4322908,0.007103551,0.5253284,0.0106719695,0.0015597364,0.0005669391,0.0041869087,0.0012001147,0.017091556],"genre_scores_gemma":[0.9581929,0.0026679006,0.026366891,0.00035962067,0.0006664217,0.00035957954,0.0036457065,0.000056536497,0.0076844334],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99816483,0.00056862296,0.00010070646,0.0005980706,0.00023897046,0.00032890667],"domain_scores_gemma":[0.9915275,0.005414325,0.00066736055,0.00031150156,0.0016558758,0.00042354694],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0037075027,0.0019425387,0.001164985,0.0021084233,0.0008373401,0.0024032977,0.0016527962,0.0010308969,0.009453563],"category_scores_gemma":[0.015126104,0.00038988827,0.0017412547,0.0013986703,0.0006380301,0.0028778322,0.0010740034,0.0021364458,0.00088093145],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046290632,0.00057513994,0.26387966,0.0005343183,0.0006518619,0.00065700244,0.00046620824,0.5011423,0.0008157083,0.049239766,0.028118424,0.15345675],"study_design_scores_gemma":[0.000026768193,0.000081093145,0.009688541,0.00006138453,0.00009133988,0.00009792089,0.00016692573,0.96965516,0.000102288985,0.018809685,0.0012005176,0.000018380779],"about_ca_topic_score_codex":0.028632801,"about_ca_topic_score_gemma":0.012756406,"teacher_disagreement_score":0.028632801,"about_ca_system_score_codex":0.0021132454,"about_ca_system_score_gemma":0.0027847968,"threshold_uncertainty_score":0.05693227},"labels":[],"label_agreement":null},{"id":"W4403305147","doi":"10.2139/ssrn.4980635","title":"Combination Therapy Enhances the Antiviral Activity of Ifn-Λ Against Sars-Cov-2 and Mers-Cov","year":2024,"lang":"en","type":"preprint","venue":"SSRN Electronic Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; Toronto General Hospital; University of Saskatchewan","funders":"","keywords":"Virology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Antiviral therapy; Middle East respiratory syndrome coronavirus; Pandemic; Biology; Medicine; Virus; Infectious disease (medical specialty); Outbreak; Disease","score_opus":0.01640471602675508,"score_gpt":0.2871613236191441,"score_spread":0.270756607592389,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403305147","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99442565,0.0018662236,0.00067114347,0.00011165282,0.00012172922,0.000044740184,0.00010630065,0.00006406035,0.0025885832],"genre_scores_gemma":[0.99640274,0.0006832522,0.0006961138,0.00005350843,0.00007332634,0.000026711323,0.0001466087,0.000013476254,0.0019042772],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982566,0.000047661102,0.00001053764,0.000030193338,0.00003745493,0.000048648708],"domain_scores_gemma":[0.99991465,0.000027595715,0.000015028476,0.000012024558,0.000007308386,0.000023464938],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002024971,0.0003223873,0.0007186298,0.0002762074,0.00013689883,0.00048271165,0.0002021622,0.00033613516,0.0032260688],"category_scores_gemma":[0.0001962923,0.00013501555,0.00031237063,0.00015062327,0.00019252686,0.00029952067,0.00019110978,0.0008036853,0.00066289265],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0148057975,0.0020829143,0.0017427427,0.0002426524,0.00014886116,0.00025331363,0.00007860698,0.0022093535,0.88740516,0.0003650763,0.0013239393,0.089341626],"study_design_scores_gemma":[0.0026937502,0.055787012,0.01970517,0.00005913683,0.0007211882,0.0019235811,0.00015360548,0.009062997,0.8925889,0.00063334504,0.016611818,0.00005938193],"about_ca_topic_score_codex":0.000197977,"about_ca_topic_score_gemma":0.0003805016,"teacher_disagreement_score":0.0032260688,"about_ca_system_score_codex":0.00019558554,"about_ca_system_score_gemma":0.00019114131,"threshold_uncertainty_score":0.010792255},"labels":[],"label_agreement":null},{"id":"W4403499303","doi":"10.1101/2024.10.15.618382","title":"Dengue virus replicative-form dsRNA is recognized by RIG-I and MDA5 cooperatively to activate innate immunity","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"MDA5; Innate immune system; Biology; RNA silencing; RIG-I; Immunity; Cell biology; Virology; RNA interference; Genetics; Immune system; RNA; Gene","score_opus":0.014409302579654672,"score_gpt":0.2448934728184636,"score_spread":0.23048417023880893,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403499303","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98607975,0.0028832299,0.00779782,0.00015201641,0.00006539722,0.00005632267,0.00021923226,0.00009225327,0.0026540011],"genre_scores_gemma":[0.99590033,0.0002754519,0.001966745,0.0000811343,0.0000127629455,0.000027762962,0.00025695,0.000005953484,0.0014728454],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995838,0.000087036606,0.00003598621,0.000075390526,0.00008473273,0.00013309091],"domain_scores_gemma":[0.9998685,0.000022767814,0.000025170135,0.000024984909,0.00002330287,0.00003523625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003030985,0.0004325414,0.0002753752,0.00018528246,0.000170373,0.0003225229,0.0002013095,0.00028023368,0.0015709851],"category_scores_gemma":[0.00015901755,0.00017979761,0.00060182763,0.000077852616,0.00018620784,0.00025073552,0.00051030633,0.00055071106,0.00065229286],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004410006,0.000016314581,0.00036287762,0.00003232016,0.00000605663,0.000044000164,0.000014119983,0.000027857095,0.99880826,0.00013080619,0.000030724506,0.0004826011],"study_design_scores_gemma":[0.000022803013,0.00022786742,0.014481035,0.000012875915,0.000022400254,0.00035216124,0.0000876962,0.002608124,0.97905743,0.0002233054,0.002895856,0.000008495726],"about_ca_topic_score_codex":0.00023030592,"about_ca_topic_score_gemma":0.00028627898,"teacher_disagreement_score":0.0015709851,"about_ca_system_score_codex":0.000298925,"about_ca_system_score_gemma":0.00019989793,"threshold_uncertainty_score":0.0052555203},"labels":[],"label_agreement":null},{"id":"W4403667977","doi":"10.1016/j.lfs.2024.123173","title":"Autophagy deficiency exacerbated hypoxia-reoxygenation induced inflammation and cell death via a mitochondrial DNA/STING/IRF3 pathway","year":2024,"lang":"en","type":"article","venue":"Life Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of Toronto; York University","funders":"Canadian Institutes of Health Research; Canada Foundation for Innovation; Ontario Research Foundation; Heart and Stroke Foundation of Canada","keywords":"Autophagy; Hypoxia (environmental); Sting; Inflammation; Programmed cell death; Mitochondrial DNA; Cell biology; Biology; Medicine; Chemistry; Apoptosis; Immunology; Genetics; Gene; Oxygen","score_opus":0.021313093476680336,"score_gpt":0.25350360339685535,"score_spread":0.232190509920175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403667977","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961344,0.0011941754,0.0013882925,0.000108685555,0.0000332259,0.000025741232,0.00031414913,0.00008212815,0.00071913574],"genre_scores_gemma":[0.99552214,0.00071085297,0.0010979065,0.000056433164,0.000013458849,0.00005140827,0.00035373302,0.000013159871,0.002180991],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998746,0.000017825801,0.00001892176,0.00002564642,0.000021425874,0.00004146449],"domain_scores_gemma":[0.9999176,0.0000052629143,0.000031766507,0.00000896477,0.000008475743,0.000027948554],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016419061,0.00036030414,0.0003560647,0.00028843756,0.00013315183,0.00020878433,0.00012783169,0.00030424848,0.0018420577],"category_scores_gemma":[0.00005435982,0.00012205163,0.00029916677,0.00011724333,0.00028002722,0.00021011897,0.00014489208,0.0006008192,0.00030098314],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042746507,0.000038066602,0.00017496881,0.00004797608,0.000004549391,0.00003871226,0.000011435772,0.000025536243,0.9985258,0.000050540984,0.000029498548,0.00062553334],"study_design_scores_gemma":[0.00004771413,0.0011710958,0.0064478926,0.000022163458,0.000039437262,0.00021965419,0.000054036263,0.0006213243,0.98980623,0.00006825458,0.0014966065,0.0000056460435],"about_ca_topic_score_codex":0.00022349668,"about_ca_topic_score_gemma":0.00046798112,"teacher_disagreement_score":0.0018420577,"about_ca_system_score_codex":0.00019183694,"about_ca_system_score_gemma":0.00022220524,"threshold_uncertainty_score":0.006162286},"labels":[],"label_agreement":null},{"id":"W4403832334","doi":"10.1681/asn.2024br04neby","title":"Global but Not Tubule Cell-Specific Knockout of STING Attenuates Kidney Injury in Mice with Unilateral Ureteral Obstruction","year":2024,"lang":"en","type":"article","venue":"Journal of the American Society of Nephrology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"","keywords":"Medicine; Knockout mouse; Sting; Renal tubule; Kidney; Acute kidney injury; Renal injury; Urology; Tubule; Proximal tubule; Pathology; Nephrology; Internal medicine; Receptor; Physics","score_opus":0.009045677946094595,"score_gpt":0.24369443448251907,"score_spread":0.23464875653642447,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403832334","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909017,0.0018737173,0.0038623242,0.00020058571,0.00010012881,0.00009634916,0.0012781516,0.00047725416,0.0012098812],"genre_scores_gemma":[0.98677516,0.0020211693,0.0036386014,0.00015187949,0.000048592054,0.00021277761,0.0015402745,0.00014713648,0.0054643443],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995022,0.00004716866,0.00006152247,0.0001162922,0.000113332644,0.00015955264],"domain_scores_gemma":[0.9992144,0.000033217635,0.00033874204,0.000057740697,0.000038493097,0.00031742273],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039975636,0.0011839523,0.0010349326,0.0012319684,0.00030988434,0.0005770571,0.00047175636,0.0008204123,0.003930493],"category_scores_gemma":[0.00022709469,0.0005173997,0.0007488153,0.00043851708,0.0008954488,0.00076911156,0.00048249826,0.0016210357,0.0007359304],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00057639665,0.00013959451,0.000550251,0.00014090097,0.00001834336,0.00010350126,0.000038922284,0.00009717593,0.99698097,0.00012291875,0.00008019014,0.0011507919],"study_design_scores_gemma":[0.00017673692,0.002625406,0.01965474,0.00008121549,0.00015679272,0.00087012915,0.00018456895,0.0015000534,0.97152555,0.00015735341,0.003043569,0.000023861123],"about_ca_topic_score_codex":0.00043376835,"about_ca_topic_score_gemma":0.0010775267,"teacher_disagreement_score":0.003930493,"about_ca_system_score_codex":0.0004216175,"about_ca_system_score_gemma":0.00047735512,"threshold_uncertainty_score":0.013148785},"labels":[],"label_agreement":null},{"id":"W4404184419","doi":"10.1186/s12985-024-02557-x","title":"Endogenous ZAP is associated with altered Zika virus infection phenotype","year":2024,"lang":"en","type":"article","venue":"Virology Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Zika virus; Vero cell; Virology; Biology; Virus; Interferon; Interferon type I; Endogeny","score_opus":0.022473021747206806,"score_gpt":0.2451533745915233,"score_spread":0.2226803528443165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404184419","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959926,0.00090077095,0.0013507217,0.00005330116,0.00003347087,0.0000065692693,0.00096591027,0.00008376194,0.00061293645],"genre_scores_gemma":[0.99785966,0.00025075424,0.00036272543,0.00004354115,0.000008409508,0.0000072689236,0.0007121651,0.000020640044,0.0007347884],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998666,0.000007447249,0.000008329562,0.00004313503,0.000025236692,0.00004920067],"domain_scores_gemma":[0.9998708,0.000013926361,0.000055990764,0.000010359868,0.000009838898,0.00003906344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005247773,0.00021046565,0.00017972014,0.00029943587,0.00021259545,0.00042914812,0.00011649301,0.00029370893,0.002460741],"category_scores_gemma":[0.0001438962,0.0001382856,0.00024731044,0.0001529711,0.00023475836,0.00013988743,0.00029758117,0.00062821375,0.00051810144],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021467065,0.000008964311,0.0019055812,0.000044347515,0.000010341778,0.0002037462,0.000020711832,0.000026671985,0.99639773,0.00006534186,0.00008408187,0.0010178372],"study_design_scores_gemma":[0.00004557765,0.00025485764,0.31128982,0.00004043223,0.000120748424,0.005041735,0.00033578163,0.0023445864,0.67368597,0.0005912516,0.006204273,0.000044849465],"about_ca_topic_score_codex":0.00042963112,"about_ca_topic_score_gemma":0.0003346954,"teacher_disagreement_score":0.002460741,"about_ca_system_score_codex":0.00024294894,"about_ca_system_score_gemma":0.000097789416,"threshold_uncertainty_score":0.0082319975},"labels":[],"label_agreement":null},{"id":"W4404445260","doi":"10.1038/s41598-024-76855-3","title":"High throughput screen identifies lysosomal acid phosphatase 2 (ACP2) to regulate IFN-1 responses to potentiate oncolytic VSV∆51 activity","year":2024,"lang":"en","type":"article","venue":"Scientific Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"Terry Fox Research Institute; Canadian Cancer Society; Canadian Institutes of Health Research; University of Ottawa","keywords":"Oncolytic virus; Acid phosphatase; Throughput; Phosphatase; Cell biology; Biology; Cancer research; Biochemistry; Computer science; Enzyme; Tumor cells; Phosphorylation; Telecommunications","score_opus":0.01506646078974925,"score_gpt":0.2773963284849864,"score_spread":0.26232986769523714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404445260","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.974519,0.005032087,0.011958715,0.0002811845,0.000055291897,0.00018252339,0.0037759163,0.00040260423,0.0037927106],"genre_scores_gemma":[0.98040706,0.002741837,0.0067506386,0.00011805884,0.000012249483,0.0001236583,0.005244123,0.000046853154,0.004555558],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998042,0.000023253333,0.000016082906,0.00004140886,0.00008859149,0.000026517673],"domain_scores_gemma":[0.9999299,0.000019153953,0.000014766865,0.00000882373,0.000015209485,0.000012053387],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026100586,0.00051856757,0.0006326447,0.00038848066,0.0002234477,0.000512314,0.00029488374,0.0003437918,0.0010962877],"category_scores_gemma":[0.00017597615,0.00020178089,0.0004211594,0.0003666107,0.00012302988,0.0001523103,0.00026091677,0.0003893189,0.0005428588],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010207627,0.000055279437,0.000553604,0.00007729011,0.000021998918,0.00008231311,0.0000059659446,0.0004490881,0.9956613,0.00006140493,0.00012531217,0.0028044088],"study_design_scores_gemma":[0.000026524453,0.00046867316,0.0032235312,0.0000054031675,0.00007341412,0.00028301627,0.000022585715,0.0025948083,0.98954904,0.000052230665,0.0036925732,0.000008201993],"about_ca_topic_score_codex":0.000503715,"about_ca_topic_score_gemma":0.0014413402,"teacher_disagreement_score":0.0010962877,"about_ca_system_score_codex":0.00037459686,"about_ca_system_score_gemma":0.00035244567,"threshold_uncertainty_score":0.0036674142},"labels":[],"label_agreement":null},{"id":"W4404527512","doi":"10.1073/pnas.2413018121","title":"The 4EHP-mediated translational repression of cGAS impedes the host immune response against DNA viruses","year":2024,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Children's Hospital of Eastern Ontario; McGill University","funders":"Biotechnology and Biological Sciences Research Council; Canadian Institutes of Health Research; McGill University; National Research Foundation of Korea; UK Research and Innovation; National Research Foundation; Directorate for Biological Sciences; Terry Fox Research Institute; University of Ottawa","keywords":"Innate immune system; Biology; Viral replication; Psychological repression; Vaccinia; Interferon; Virology; Virus; Pattern recognition receptor; Immune system; DNA virus; Cell biology; Gene; Gene expression; Immunology; Genetics; Recombinant DNA","score_opus":0.03285618031660223,"score_gpt":0.3134869041415329,"score_spread":0.2806307238249307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404527512","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927631,0.0011391025,0.00424077,0.00019405164,0.000048602655,0.000024268706,0.00032692807,0.000103328915,0.0011597828],"genre_scores_gemma":[0.9935894,0.00040338686,0.003266979,0.000059010134,0.000014414861,0.000030538096,0.00046033115,0.000033348966,0.002142576],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982953,0.000032294447,0.0000146159255,0.000036205547,0.000048657534,0.00003865405],"domain_scores_gemma":[0.9998641,0.000029173163,0.000044138178,0.000020606496,0.000008837034,0.00003314187],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018823412,0.0004300312,0.00024427378,0.00017605384,0.0001438419,0.0002819252,0.00030609625,0.00027086883,0.0011699804],"category_scores_gemma":[0.00015025074,0.00014219302,0.00024272481,0.00008522548,0.00043531656,0.00017503349,0.00037483545,0.0007043161,0.00030591595],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044997112,0.000009814425,0.0000536907,0.000012524476,0.0000020380155,0.000021825543,0.0000028452803,0.000043313597,0.9992373,0.00009846445,0.000014407173,0.0004587664],"study_design_scores_gemma":[0.0000064806745,0.0000651189,0.0007820053,0.0000020461111,0.0000028516586,0.00006687914,0.0000056195536,0.00049908133,0.99758244,0.000042256608,0.00094325107,0.0000019931779],"about_ca_topic_score_codex":0.00039689438,"about_ca_topic_score_gemma":0.0006072463,"teacher_disagreement_score":0.0011699804,"about_ca_system_score_codex":0.00040957428,"about_ca_system_score_gemma":0.00033433182,"threshold_uncertainty_score":0.0039139986},"labels":[],"label_agreement":null},{"id":"W4404702509","doi":"10.1021/acsmedchemlett.4c00471","title":"Discovery of Potent and Orally Bioavailable Pyrimidine Amide cGAS Inhibitors via Structure-Guided Hybridization","year":2024,"lang":"en","type":"article","venue":"ACS Medicinal Chemistry Letters","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Telesta Therapeutics (Canada)","funders":"","keywords":"Lead compound; Chemistry; Pyrimidine; Ligand efficiency; In vivo; Pharmacology; Carboxylate; Amide; Binding site; Structure–activity relationship; Stereochemistry; Biochemistry; Ligand (biochemistry); In vitro; Biology; Receptor","score_opus":0.007244839669150024,"score_gpt":0.22393585643587088,"score_spread":0.21669101676672087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404702509","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9349619,0.005335895,0.042280834,0.0005010996,0.00010002676,0.0010141479,0.0013589473,0.0006679058,0.013779375],"genre_scores_gemma":[0.9738308,0.0027396653,0.016912734,0.00016002113,0.000023948714,0.00025360548,0.00085057603,0.000039206072,0.0051894905],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998109,0.000034587283,0.000009200358,0.000037353995,0.000060428785,0.000047547717],"domain_scores_gemma":[0.99993026,0.000014817911,0.000020192623,0.0000073517435,0.000013220335,0.000014200484],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029134811,0.0005687496,0.0005043448,0.00027825424,0.00017276368,0.00035747516,0.00043015956,0.00032917183,0.0018039432],"category_scores_gemma":[0.00025557308,0.00020242704,0.00029498892,0.00027857916,0.00023744798,0.00020468698,0.0003709886,0.00060747756,0.0005110723],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022841003,0.00016980275,0.0002486718,0.00014027102,0.000020363497,0.0002571605,0.000069029295,0.0029001068,0.97650427,0.00085497607,0.0004102091,0.018196752],"study_design_scores_gemma":[0.00015533781,0.0024833626,0.0007549875,0.000011764598,0.000040995026,0.0004838145,0.000037091166,0.0044865212,0.98070186,0.0002523465,0.010568574,0.00002328602],"about_ca_topic_score_codex":0.0005575468,"about_ca_topic_score_gemma":0.0016408945,"teacher_disagreement_score":0.0018039432,"about_ca_system_score_codex":0.0005229087,"about_ca_system_score_gemma":0.00032031993,"threshold_uncertainty_score":0.0060347915},"labels":[],"label_agreement":null},{"id":"W4404727696","doi":"10.1016/j.omtn.2024.102402","title":"An mRNA vaccine induces antimycobacterial immunity by activating DNA damage repair and autophagy","year":2024,"lang":"en","type":"article","venue":"Molecular Therapy — Nucleic Acids","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Key Research and Development Program of China; Fudan University; National Natural Science Foundation of China","keywords":"Antimycobacterial; Autophagy; Immunity; DNA vaccination; Biology; DNA damage; Virology; DNA; Microbiology; Immunology; Immune system; Medicine; Tuberculosis; Genetics; Mycobacterium tuberculosis; Apoptosis; Immunization","score_opus":0.007651773201580437,"score_gpt":0.25246921489615765,"score_spread":0.2448174416945772,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404727696","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9869033,0.0033825345,0.006383114,0.00026821948,0.00011526342,0.00009885222,0.00017106527,0.00015183985,0.0025257925],"genre_scores_gemma":[0.9910807,0.0016349741,0.004042949,0.00010712416,0.000026770953,0.00005825873,0.00021130411,0.000014676212,0.0028231735],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999217,0.000013118466,0.000005538797,0.000016968803,0.000020778622,0.000021950784],"domain_scores_gemma":[0.999959,0.0000065765125,0.0000150097485,0.0000040586483,0.0000067449764,0.000008510038],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010356366,0.00029309271,0.0002213501,0.00018459297,0.000080219856,0.00015087107,0.00008450088,0.00028016235,0.001083996],"category_scores_gemma":[0.00007526098,0.00007114949,0.00019076333,0.00004932951,0.00018092991,0.00016060797,0.00016877711,0.00037427663,0.00019445032],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047574886,0.000021086618,0.000074032956,0.00003927259,0.0000022016684,0.000021894873,0.00000481571,0.000039074435,0.99776006,0.00006491123,0.000029733466,0.0018952627],"study_design_scores_gemma":[0.000024474162,0.0013898065,0.0019223846,0.000014945153,0.000017579576,0.00015534539,0.000021904065,0.00061078777,0.99213725,0.00006765974,0.003633757,0.000003963593],"about_ca_topic_score_codex":0.00018999167,"about_ca_topic_score_gemma":0.00050305546,"teacher_disagreement_score":0.001083996,"about_ca_system_score_codex":0.0001633547,"about_ca_system_score_gemma":0.00019041459,"threshold_uncertainty_score":0.0036263466},"labels":[],"label_agreement":null},{"id":"W4404730259","doi":"10.1002/1878-0261.13771","title":"Viral mimicry evasion: a new role for oncogenic <scp>KRAS</scp> mutations","year":2024,"lang":"en","type":"article","venue":"Molecular Oncology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research; Princess Margaret Cancer Foundation","keywords":"KRAS; Biology; Cancer research; Molecular mimicry; Carcinogenesis; TLR3; RNA silencing; Signal transduction; Interferon; RNA interference; Cancer; Immune system; RNA; Innate immune system; Immunology; Cell biology; Genetics; Toll-like receptor; Gene; Colorectal cancer","score_opus":0.012577066748089326,"score_gpt":0.29133331329712764,"score_spread":0.2787562465490383,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404730259","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.75057477,0.14373714,0.039604243,0.023252733,0.002076414,0.00015174175,0.00021869324,0.000556418,0.039827876],"genre_scores_gemma":[0.94998866,0.030592732,0.0072138244,0.0029124657,0.00071769336,0.00004955084,0.000092841045,0.00004946217,0.008382832],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978083,0.000039896695,0.000011566393,0.00004802795,0.00007786255,0.000041844287],"domain_scores_gemma":[0.9998079,0.000053397882,0.000046550656,0.00002208426,0.000024642199,0.000045318448],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003971546,0.00044525767,0.00032718634,0.0003077677,0.00022872728,0.0008817104,0.00029059855,0.00086873805,0.0011848119],"category_scores_gemma":[0.0002491026,0.00014841276,0.0002839838,0.00014433623,0.0007805058,0.0008094612,0.00042373934,0.0012962383,0.0002488047],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045878405,0.00011173945,0.0019046761,0.0003378876,0.000034235454,0.0013180556,0.00019819962,0.0003515426,0.89902836,0.014897273,0.0027214389,0.07863786],"study_design_scores_gemma":[0.0001846373,0.0020614492,0.014265207,0.00020734992,0.00012824517,0.018028358,0.00048356727,0.0056641735,0.64675367,0.020140143,0.2920041,0.00007906527],"about_ca_topic_score_codex":0.00007321413,"about_ca_topic_score_gemma":0.00012075288,"teacher_disagreement_score":0.0011848119,"about_ca_system_score_codex":0.00039534486,"about_ca_system_score_gemma":0.00017485,"threshold_uncertainty_score":0.0039636493},"labels":[],"label_agreement":null},{"id":"W4404826383","doi":"10.69645/cgtz7509","title":"Enhancing innate anti-tumour immunity: lessons from virotherapy and STING agonism 2","year":2024,"lang":"en","type":"article","venue":"˜The œbiomedical & life sciences collection.","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Cancer Research","funders":"","keywords":"Agonism; Innate immune system; Sting; Immunology; Immunity; Virotherapy; Medicine; Oncolytic virus; Political science; Virus; Immune system; Engineering","score_opus":0.021633020991765617,"score_gpt":0.29724370219948826,"score_spread":0.27561068120772264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404826383","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009459866,0.8427678,0.008520304,0.08193243,0.015296635,0.00012142197,0.00030709433,0.0004118879,0.04118254],"genre_scores_gemma":[0.06469816,0.83396727,0.008311105,0.031311564,0.01565014,0.00016306124,0.0003040045,0.00018385258,0.04541098],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99973804,0.00007923479,0.000012816941,0.000027427426,0.000096901975,0.00004552728],"domain_scores_gemma":[0.9994498,0.00028885686,0.000033047923,0.000022519753,0.0000697143,0.00013608909],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014027802,0.00069445604,0.00056886865,0.00062389916,0.00033741572,0.0012970658,0.00066642754,0.0014223095,0.00798733],"category_scores_gemma":[0.0011652801,0.00019031657,0.0004581491,0.00027138012,0.0008621645,0.0016714575,0.0010032495,0.0049462677,0.002347888],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005540875,0.00040788986,0.00042377628,0.0033284908,0.000058795373,0.00049474306,0.00050583907,0.00058879994,0.011373416,0.011622378,0.22348125,0.7471606],"study_design_scores_gemma":[0.0001939479,0.0010424355,0.0014698083,0.00207582,0.00006905164,0.0014201032,0.00044780216,0.0003704596,0.007939948,0.019596476,0.96533424,0.000039971037],"about_ca_topic_score_codex":0.00046840528,"about_ca_topic_score_gemma":0.001365197,"teacher_disagreement_score":0.00798733,"about_ca_system_score_codex":0.00049922254,"about_ca_system_score_gemma":0.0005466017,"threshold_uncertainty_score":0.026720226},"labels":[],"label_agreement":null},{"id":"W4404826702","doi":"10.69645/fgvw6016","title":"Enhancing innate anti-tumour immunity: lessons from virotherapy and STING agonism 1","year":2024,"lang":"en","type":"article","venue":"˜The œbiomedical & life sciences collection.","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Cancer Research","funders":"","keywords":"Agonism; Innate immune system; Sting; Immunology; Immunity; Virotherapy; Medicine; Oncolytic virus; Political science; Virus; Immune system; Engineering","score_opus":0.022298173305213435,"score_gpt":0.2977567977164723,"score_spread":0.27545862441125885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404826702","genre_codex":"review","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008070798,0.86702955,0.0073346673,0.07194071,0.012675894,0.00009669727,0.0002522089,0.00032661235,0.032272875],"genre_scores_gemma":[0.057355154,0.86083215,0.0073760888,0.027000347,0.013726898,0.0001330124,0.00024172902,0.0001510332,0.033183586],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99972826,0.00008546528,0.000014097947,0.000029098323,0.0000974806,0.000045572706],"domain_scores_gemma":[0.9993886,0.00033498585,0.000038174632,0.000023963872,0.00007564167,0.0001386914],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013917808,0.00071794045,0.0006046549,0.00063724467,0.00034642083,0.0012437031,0.00066158583,0.0013768197,0.0073104077],"category_scores_gemma":[0.0011964713,0.00018866175,0.00044003167,0.00029351749,0.000943894,0.0018290865,0.0009908539,0.005170399,0.0021783723],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005732353,0.00041335766,0.00046307396,0.003838736,0.00006246218,0.0004892071,0.00051899324,0.0005593139,0.012341068,0.012663348,0.2075705,0.76050675],"study_design_scores_gemma":[0.00019827903,0.0011988671,0.001526484,0.0022222032,0.00007506011,0.0015114887,0.0004595778,0.0003680946,0.008843433,0.02253016,0.9610248,0.00004152173],"about_ca_topic_score_codex":0.00043328153,"about_ca_topic_score_gemma":0.0013047869,"teacher_disagreement_score":0.0073104077,"about_ca_system_score_codex":0.0005066758,"about_ca_system_score_gemma":0.0005330129,"threshold_uncertainty_score":0.024455786},"labels":[],"label_agreement":null},{"id":"W4404968465","doi":"10.3389/fendo.2024.1522613","title":"Editorial: Redox signaling and homeostasis in the control of metabolism: a systemic interplay between central and peripheral effectors","year":2024,"lang":"en","type":"editorial","venue":"Frontiers in Endocrinology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"","keywords":"Oxidative stress; Homeostasis; Inflammation; Context (archaeology); Biology; Disease; Oxidative phosphorylation; Glucose homeostasis; Bioinformatics; Cell biology; Medicine; Diabetes mellitus; Insulin resistance; Immunology; Endocrinology; Internal medicine; Biochemistry","score_opus":0.004170890107321704,"score_gpt":0.24730578606914852,"score_spread":0.2431348959618268,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404968465","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009035154,0.006994265,0.0001656923,0.015156029,0.976489,0.000019193742,0.00010647597,0.00007684228,0.00090208324],"genre_scores_gemma":[0.0005673924,0.0052844645,0.00009605193,0.00891531,0.9798957,0.000014894694,0.000059215847,0.000032997832,0.005134009],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99740905,0.0003386363,0.000291199,0.0005757616,0.0011224156,0.00026291507],"domain_scores_gemma":[0.9918429,0.00302296,0.0005968779,0.00018102677,0.002653757,0.001702461],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0037220926,0.0041514193,0.0032142606,0.0028410652,0.0017650243,0.004373553,0.0034908908,0.007725692,0.028009713],"category_scores_gemma":[0.009823926,0.00089399103,0.0026405088,0.0010517025,0.0017794864,0.004028615,0.0012252225,0.00960962,0.014781137],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022352693,0.000027837523,0.000058243902,0.0008005753,0.000040148698,0.00020754663,0.000021953605,0.00006170331,0.00032642047,0.0004033558,0.9878451,0.009983556],"study_design_scores_gemma":[0.00011462354,0.00014738053,0.0005421111,0.0006702905,0.0000885498,0.00069279165,0.000056791872,0.00020859743,0.00042322534,0.0010842754,0.99593806,0.000033347682],"about_ca_topic_score_codex":0.0005498695,"about_ca_topic_score_gemma":0.0010122702,"teacher_disagreement_score":0.028009713,"about_ca_system_score_codex":0.0018072409,"about_ca_system_score_gemma":0.0019733731,"threshold_uncertainty_score":0.09370184},"labels":[],"label_agreement":null},{"id":"W4405308283","doi":"10.1101/2024.12.08.627385","title":"STING agonists drive recruitment and intrinsic type I interferon responses in monocytic lineage cells for optimal anti-tumor immunity","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Stimulator of interferon genes; Sting; Interferon; Agonist; Cancer research; Biology; Chemokine; Immunology; Immunotherapy; CD8; Receptor; Inflammation; Innate immune system; Antigen; Immune system","score_opus":0.034916453679767034,"score_gpt":0.27474211239976576,"score_spread":0.23982565871999872,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405308283","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99582386,0.00080728903,0.0015604653,0.000056879773,0.000018527051,0.000029844437,0.00071470777,0.000050771843,0.00093761145],"genre_scores_gemma":[0.9953982,0.00033557767,0.0016883425,0.00004108453,0.000009082925,0.00003294015,0.00048943714,0.000012555648,0.0019927146],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983203,0.000021495856,0.000015398713,0.00003105486,0.000042756958,0.00005726491],"domain_scores_gemma":[0.9999044,0.0000075770504,0.000025277512,0.000010667953,0.000010089538,0.000042004238],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000095184456,0.00025221752,0.0002042345,0.0001323049,0.00011990106,0.00026330005,0.00007106987,0.00017514918,0.0015641594],"category_scores_gemma":[0.000054461005,0.00011308999,0.00017488768,0.00008371808,0.00013805911,0.00011659447,0.00014604739,0.00067723397,0.0006199034],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051019313,0.0000066769776,0.00010797184,0.000007834719,5.338157e-7,0.000011837985,0.0000049179725,0.000012592724,0.9995407,0.00002966882,0.000014090343,0.00021223976],"study_design_scores_gemma":[0.000014977508,0.0002836893,0.00610517,0.0000062369127,0.0000062892714,0.00012821888,0.000035864607,0.0006621904,0.9908641,0.000030028425,0.0018607584,0.0000024022268],"about_ca_topic_score_codex":0.00029716612,"about_ca_topic_score_gemma":0.00074723497,"teacher_disagreement_score":0.0015641594,"about_ca_system_score_codex":0.00024023412,"about_ca_system_score_gemma":0.00016168728,"threshold_uncertainty_score":0.0052325726},"labels":[],"label_agreement":null},{"id":"W4405444871","doi":"10.1084/jem.20241413","title":"A common form of dominant human IFNAR1 deficiency impairs IFN-α and -ω but not IFN-β-dependent immunity","year":2024,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"ASTER; SickKids Foundation; Hospital for Sick Children","funders":"NIH Clinical Center; National Institute of Allergy and Infectious Diseases; Fisher Center for Alzheimer's Research Foundation; Agence Nationale de la Recherche; National Center for Research Resources; King Abdulaziz City for Science and Technology; Stavros Niarchos Foundation; King Abdullah University of Science and Technology; National Center for Advancing Translational Sciences; King Saud University; SCOR Corporate Foundation for Science; Institut des maladies génétiques Imagine; Karolinska Institutet; Institut National de la Santé et de la Recherche Médicale; University of Texas Southwestern Medical Center; Fondation du Souffle; Wellcome Trust; Meyer Foundation; Rockefeller University; National Institutes of Health; American Lung Association; St. Giles Foundation; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Institut de Recherche pour le Développement; Howard Hughes Medical Institute","keywords":"Biology; Allele; Dominance (genetics); Haploinsufficiency; Genetics; Interferon; Immunity; Immunology; Phenotype; Heterozygote advantage; Gene; Immune system","score_opus":0.020340144125154256,"score_gpt":0.3169142886064337,"score_spread":0.29657414448127944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405444871","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968272,0.00039230843,0.001130959,0.000041362175,0.000010790749,0.000014554675,0.00040472028,0.000055727458,0.0011223559],"genre_scores_gemma":[0.9975216,0.00019986067,0.0005893552,0.00003913285,0.0000054535553,0.000009342769,0.0003222954,0.000011016895,0.0013020409],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998492,0.000019776922,0.00001847162,0.000057783767,0.00003194058,0.000022750663],"domain_scores_gemma":[0.99989593,0.000019833284,0.00003334707,0.00001559392,0.000007189225,0.000028155599],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000101136204,0.00064369634,0.000255147,0.00028308659,0.00017731874,0.00013674787,0.00015927963,0.00022318089,0.002885114],"category_scores_gemma":[0.0001524325,0.00010668259,0.00016785573,0.00020127861,0.00025475005,0.00008057782,0.0002362279,0.00026614981,0.00044381266],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037139174,0.000056015164,0.012888927,0.00007263849,0.000032918877,0.004492054,0.000110871006,0.00012673186,0.9709896,0.00032227125,0.00032501516,0.010211559],"study_design_scores_gemma":[0.00023363884,0.0017779883,0.27492595,0.000048752016,0.0001897922,0.11499282,0.00027807947,0.0017663033,0.58944404,0.000825878,0.015472779,0.000044009135],"about_ca_topic_score_codex":0.0010148333,"about_ca_topic_score_gemma":0.0015278683,"teacher_disagreement_score":0.002885114,"about_ca_system_score_codex":0.00015481975,"about_ca_system_score_gemma":0.00018589738,"threshold_uncertainty_score":0.009651661},"labels":[],"label_agreement":null},{"id":"W4405463772","doi":"10.1159/000542264","title":"Acknowledgement to Reviewers","year":2024,"lang":"en","type":"article","venue":"Journal of Innate Immunity","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Acknowledgement; Computational biology; Computer science; Biology; Computer security","score_opus":0.018588504109405886,"score_gpt":0.30401532629640426,"score_spread":0.2854268221869984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405463772","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005188073,0.01623188,0.0039187786,0.23433225,0.6531442,0.0006457123,0.0032766003,0.00201355,0.0859182],"genre_scores_gemma":[0.012598205,0.019887824,0.007524989,0.16946067,0.23722026,0.0016817321,0.0054624593,0.0039532376,0.5422107],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9732036,0.0072540827,0.0030159738,0.004367845,0.010289375,0.0018691565],"domain_scores_gemma":[0.81860226,0.01960219,0.007901509,0.010316756,0.12762386,0.01595346],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.01721978,0.0021244437,0.0020956276,0.0058946274,0.004009341,0.016445113,0.004684921,0.0063514127,0.30824754],"category_scores_gemma":[0.17387474,0.00083388283,0.0013657615,0.003264559,0.002354403,0.009509132,0.0074639455,0.00802989,0.20313327],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019892452,0.00000546633,0.00006254082,0.00016216101,0.0000042395463,0.000054980996,0.00013296466,0.000013758233,0.00004263832,0.0013111094,0.98461884,0.013571343],"study_design_scores_gemma":[0.00000718546,0.0000070048395,0.00009037758,0.00029704405,0.000005025142,0.00013565237,0.00021796467,0.00002408078,0.00004543075,0.000941145,0.9982179,0.000011216987],"about_ca_topic_score_codex":0.0024054125,"about_ca_topic_score_gemma":0.0033085505,"teacher_disagreement_score":0.69175243,"about_ca_system_score_codex":0.0059556686,"about_ca_system_score_gemma":0.015833631,"threshold_uncertainty_score":0.98670095},"labels":[],"label_agreement":null},{"id":"W4405719349","doi":"10.1371/journal.ppat.1012786","title":"Systematic assessment of COVID-19 host genetics using whole genome sequencing data","year":2024,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University; Jewish General Hospital","funders":"European Research Council; Heidelberger Zentrum für Personalisierte Onkologie Deutsches Krebsforschungszentrum In Der Helmholtz-Gemeinschaft; Land Nordrhein-Westfalen; College of Medicine Office of Research, Ohio State University; Provincia autonoma di Bolzano - Alto Adige; Stiftung Universitätsmedizin Essen; Medizinische Fakultät, Rheinische Friedrich-Wilhelms-Universität Bonn; RWTH Aachen University; Rheinische Friedrich-Wilhelms-Universität Bonn; Technische Universität München; Bundesministerium für Bildung und Forschung; Illumina; Care-for-Rare Foundation; Deutsche Forschungsgemeinschaft","keywords":"Biology; Locus (genetics); Genetics; Genome-wide association study; Genetic variation; Population; Genome; Cohort; Gene; Medicine; Single-nucleotide polymorphism; Genotype; Internal medicine","score_opus":0.10219821986145265,"score_gpt":0.3457398280597644,"score_spread":0.24354160819831172,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405719349","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9789028,0.0020990816,0.006421959,0.00014331732,0.00003796738,0.00004958888,0.011114069,0.000078280325,0.0011529151],"genre_scores_gemma":[0.98273253,0.0009911899,0.004450104,0.00010576956,0.000020068213,0.000039972423,0.011285649,0.000054312797,0.0003204802],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982309,0.00059966283,0.0001723249,0.00063846377,0.00023517503,0.00012362433],"domain_scores_gemma":[0.9969728,0.001278821,0.00075903855,0.0004393156,0.00034071348,0.00020925132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024832299,0.00045635045,0.00045039863,0.0026348636,0.00039514364,0.0008058559,0.00031028021,0.00037509497,0.0014393054],"category_scores_gemma":[0.00409334,0.00020209455,0.000691415,0.0022797883,0.0002613677,0.00033271496,0.0007722114,0.00040658936,0.00034951206],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026814608,0.00002165527,0.9496987,0.000196507,0.001601882,0.00042451784,0.00026306228,0.0006014401,0.025193749,0.00026397148,0.0009799013,0.02048647],"study_design_scores_gemma":[0.000011785787,0.00010420177,0.9909786,0.000078977704,0.00043338785,0.00091362663,0.00021111114,0.0011362009,0.002237005,0.00037519666,0.0035044092,0.000015438498],"about_ca_topic_score_codex":0.0024503144,"about_ca_topic_score_gemma":0.008470405,"teacher_disagreement_score":0.0026348636,"about_ca_system_score_codex":0.00019729334,"about_ca_system_score_gemma":0.0004335697,"threshold_uncertainty_score":0.013132751},"labels":[],"label_agreement":null},{"id":"W4405803926","doi":"10.1371/journal.ppat.1012763","title":"Alternative splicing expands the antiviral IFITM repertoire in Chinese rufous horseshoe bats","year":2024,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Leids Universitair Medisch Centrum; Queen's University; National Science Foundation; Universiteit Leiden; Queen's University Belfast; Natural Science Foundation of Zhejiang Province; University of Bern","keywords":"Biology; Virus; Virology; Gene duplication; Interferon; Gene; Genetics","score_opus":0.013701889594601774,"score_gpt":0.2613720808913704,"score_spread":0.2476701912967686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405803926","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9994779,0.00013774783,0.00017663,0.000013707576,0.000001063625,0.0000022164506,0.000043058066,0.0000027518224,0.00014493165],"genre_scores_gemma":[0.9987446,0.00011254476,0.00048317292,0.000027624897,0.000006125763,0.000008703343,0.00021550384,0.0000040180944,0.00039775606],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99992585,0.0000068810873,0.0000053220915,0.000031210388,0.00001428436,0.000016386224],"domain_scores_gemma":[0.99987805,0.000021968213,0.00005247288,0.000011218992,0.000018045244,0.000018310127],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009335463,0.00012363166,0.00017885819,0.00048534313,0.0003155419,0.00017303374,0.00011821451,0.0002456115,0.00070426235],"category_scores_gemma":[0.00020429955,0.00009046559,0.0002591286,0.00026906017,0.0002660547,0.00015472175,0.00015873079,0.00018778005,0.00014118338],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020113924,0.000012968646,0.037944347,0.00007059803,0.000018995765,0.00076206034,0.00048460226,0.00010934811,0.9533713,0.00016753453,0.00005540489,0.006801617],"study_design_scores_gemma":[0.00001694123,0.00030192296,0.91902614,0.000019234147,0.000075566306,0.005701211,0.0006417717,0.0017217767,0.0684651,0.0003289072,0.0036738275,0.0000275879],"about_ca_topic_score_codex":0.000960481,"about_ca_topic_score_gemma":0.0011430396,"teacher_disagreement_score":0.000960481,"about_ca_system_score_codex":0.00017209665,"about_ca_system_score_gemma":0.00011176899,"threshold_uncertainty_score":0.0023559928},"labels":[],"label_agreement":null},{"id":"W4405942046","doi":"10.1016/j.critrevonc.2024.104610","title":"MAVS: The next STING in cancers and other diseases","year":2024,"lang":"en","type":"review","venue":"Critical Reviews in Oncology/Hematology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"University of Calgary","keywords":"Sting; Medicine; Intensive care medicine; Engineering","score_opus":0.12491320668893004,"score_gpt":0.44986374964252157,"score_spread":0.32495054295359155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405942046","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00011919842,0.996516,0.00014835826,0.00071821566,0.0008919409,0.000003815757,0.000018640221,0.000014502199,0.0015692794],"genre_scores_gemma":[0.0010115491,0.9951007,0.00019162707,0.0007782887,0.00079279114,0.0000057109896,0.000048281905,0.00000386694,0.0020672278],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99987125,0.000024808189,0.000015439933,0.00001700761,0.000051823085,0.000019552035],"domain_scores_gemma":[0.9998265,0.00006971943,0.000020778785,0.0000068712366,0.00004312388,0.000033110486],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034012378,0.00058489095,0.0007813903,0.0011531662,0.0002779957,0.0009492895,0.00054870616,0.0010566381,0.0052424637],"category_scores_gemma":[0.00050441624,0.00016702998,0.00036171052,0.00079668814,0.00036185095,0.001183344,0.00063982746,0.002376355,0.0029848134],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008071272,0.000041188538,0.00012345094,0.006467208,0.000052077074,0.0002086236,0.00005657351,0.00018959091,0.0026241099,0.005914177,0.06334457,0.92089766],"study_design_scores_gemma":[0.0000070879755,0.000045312783,0.00021283304,0.0011179318,0.000025709109,0.00080511585,0.000025128817,0.00003297009,0.00031082975,0.0015292686,0.9958813,0.0000064383376],"about_ca_topic_score_codex":0.0005556491,"about_ca_topic_score_gemma":0.0010911054,"teacher_disagreement_score":0.0052424637,"about_ca_system_score_codex":0.0004832515,"about_ca_system_score_gemma":0.00077258126,"threshold_uncertainty_score":0.017537773},"labels":[],"label_agreement":null},{"id":"W4406018855","doi":"10.12688/f1000research.155929.2","title":"A guide to selecting high-performing antibodies for STING1 (Uniprot ID: Q86WV6) for use in western blot, immunoprecipitation, and immunofluorescence","year":2025,"lang":"en","type":"preprint","venue":"F1000Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"Government of Canada; Ontario Genomics Institute; European Federation of Pharmaceutical Industries and Associations; Merck KGaA; Mitacs; Ontario Genomics; Genome Canada; Genentech; Bayer; Pfizer; Bristol-Myers Squibb","keywords":"Immunoprecipitation; Western blot; Antibody; Immunofluorescence; UniProt; Biology; Immune system; Immunology; Computational biology; Gene; Genetics","score_opus":0.045803877811122905,"score_gpt":0.37472988879802543,"score_spread":0.32892601098690255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406018855","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011151636,0.021475114,0.52639616,0.008303381,0.0037174702,0.0076588127,0.22771765,0.12236397,0.071215816],"genre_scores_gemma":[0.0057404577,0.00973376,0.731127,0.0025830136,0.0005600158,0.009280846,0.17668681,0.020599527,0.0436885],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99656206,0.0009917734,0.0006881341,0.00040482302,0.0010507422,0.00030251333],"domain_scores_gemma":[0.99295217,0.0023645067,0.00049444655,0.0015788013,0.0020448244,0.0005652862],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0059471354,0.0038529066,0.00345072,0.0065226294,0.0020597803,0.0025916684,0.005054789,0.0030262333,0.13221231],"category_scores_gemma":[0.0118999975,0.004266994,0.001839354,0.004687265,0.00089096965,0.0025414738,0.0020106456,0.004591618,0.21477918],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007928202,0.00027261244,0.00085168076,0.003423917,0.00011820329,0.00064305984,0.00026122443,0.00036660107,0.18240575,0.002378345,0.7053754,0.103110336],"study_design_scores_gemma":[0.00021135305,0.00017947753,0.002531219,0.000504662,0.00006858292,0.0014306476,0.00007387009,0.0006436763,0.035007417,0.0023019959,0.95695543,0.00009161188],"about_ca_topic_score_codex":0.0015448726,"about_ca_topic_score_gemma":0.0046152463,"teacher_disagreement_score":0.13221231,"about_ca_system_score_codex":0.0010215723,"about_ca_system_score_gemma":0.0024186645,"threshold_uncertainty_score":0.44229424},"labels":[],"label_agreement":null},{"id":"W4406072029","doi":"10.1016/j.jacig.2025.100400","title":"A 33-year diagnostic odyssey in an Ashkenazi Jewish patient with Aicardi-Goutières syndrome","year":2025,"lang":"en","type":"article","venue":"Journal of Allergy and Clinical Immunology Global","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; St. Michael's Hospital","funders":"National Institutes of Health; Hospital for Sick Children; National Human Genome Research Institute; University of Toronto","keywords":"Judaism; Medicine; Pediatrics; History; Archaeology","score_opus":0.008985280665861498,"score_gpt":0.2913372695386285,"score_spread":0.28235198887276697,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406072029","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9671022,0.0044520707,0.0022294645,0.008700155,0.00073693116,0.00008441829,0.0005167764,0.00013137667,0.016046543],"genre_scores_gemma":[0.9936824,0.0011877251,0.00070328754,0.0016280386,0.00043138277,0.000012053686,0.00016611743,0.00002058487,0.0021685138],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9997689,0.000026250857,0.000020797253,0.000055434804,0.00004034299,0.00008827389],"domain_scores_gemma":[0.99948573,0.0001257808,0.00008858853,0.000023155188,0.00006532545,0.00021140714],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025333723,0.0010222703,0.0005176831,0.001407713,0.0018607634,0.0006316704,0.00053043896,0.0034810465,0.0015876996],"category_scores_gemma":[0.0011204499,0.00039271844,0.00059537013,0.00060126773,0.00077154906,0.00082713284,0.0006160141,0.0024671485,0.00045417823],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000080550715,0.00005367211,0.03445507,0.000016519116,0.000013590549,0.9590363,0.00032853583,0.00012406814,0.0016719388,0.00026872757,0.0010952348,0.002855823],"study_design_scores_gemma":[0.000011164892,0.00016856789,0.05951369,0.000047489655,0.000030625244,0.93693244,0.00040333153,0.00031477705,0.00038213367,0.0003424769,0.0018273232,0.000025966607],"about_ca_topic_score_codex":0.009006663,"about_ca_topic_score_gemma":0.010234406,"teacher_disagreement_score":0.009006663,"about_ca_system_score_codex":0.00083693676,"about_ca_system_score_gemma":0.00063449756,"threshold_uncertainty_score":0.017908454},"labels":[],"label_agreement":null},{"id":"W4406159695","doi":"10.1016/b978-0-128-24465-4.00132-0","title":"The cGAS-STING Pathway","year":2024,"lang":"en","type":"book-chapter","venue":"Elsevier eBooks","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Princess Margaret Cancer Centre; University Health Network","funders":"","keywords":"Sting; Engineering","score_opus":0.013258515396787955,"score_gpt":0.23061274199137563,"score_spread":0.21735422659458767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406159695","genre_codex":"other","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0038601265,0.11411527,0.007133324,0.002785285,0.0032707397,0.000049166196,0.0005058398,0.0005192626,0.8677611],"genre_scores_gemma":[0.013746984,0.055999797,0.003590798,0.0008652066,0.0006577545,0.000044138516,0.0004291676,0.00007522829,0.9245909],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99995995,0.0000028734244,0.0000014888205,0.000007994701,0.00002097165,0.0000068153913],"domain_scores_gemma":[0.99998224,0.0000042481747,0.0000020873777,0.0000023531725,0.0000032986206,0.0000056913145],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007474701,0.0006809683,0.00019927602,0.00063276134,0.00023969187,0.0015064506,0.00035894103,0.00072488753,0.042223755],"category_scores_gemma":[0.00006585007,0.00018298336,0.00023535025,0.00057386653,0.00029748247,0.0009173191,0.00058718387,0.0013746853,0.028334765],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008370534,0.000067541434,0.00009227885,0.0003748037,0.000009205651,0.00024177233,0.000056969715,0.0005113514,0.059312407,0.06934124,0.14083914,0.72906965],"study_design_scores_gemma":[0.0000046758414,0.000015503107,0.00017549413,0.00006620676,0.0000028467557,0.00022600524,0.000014666237,0.00012661821,0.0047239307,0.0073281033,0.98731196,0.0000040612485],"about_ca_topic_score_codex":0.00073018,"about_ca_topic_score_gemma":0.0010934356,"teacher_disagreement_score":0.042223755,"about_ca_system_score_codex":0.00058763626,"about_ca_system_score_gemma":0.00043367225,"threshold_uncertainty_score":0.14125252},"labels":[],"label_agreement":null},{"id":"W4406253023","doi":"10.3389/fimmu.2024.1513595","title":"Loss of Parp7 increases type I interferon signalling and reduces pancreatic tumour growth by enhancing immune cell infiltration","year":2025,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Glycomics Network; Canadian Institutes of Health Research; Norges Forskningsråd; Associazione Italiana per la Ricerca sul Cancro","keywords":"Infiltration (HVAC); Interferon; Immune system; Cancer research; Signalling; Cell growth; Biology; Immunology; Cell biology; Chemistry; Materials science; Biochemistry","score_opus":0.0044127607611380805,"score_gpt":0.21333421620621001,"score_spread":0.20892145544507193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406253023","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9875481,0.0023427468,0.0045356452,0.00029514468,0.00011726639,0.000055560326,0.0012775037,0.0005036314,0.0033244335],"genre_scores_gemma":[0.99254346,0.0009359075,0.0021218767,0.0001406064,0.000020089918,0.00006370549,0.0011533578,0.0000709983,0.0029499924],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997757,0.000023988936,0.000024857063,0.000055983626,0.000063055835,0.000056369518],"domain_scores_gemma":[0.99974614,0.000036346923,0.00009531477,0.00002589549,0.000020545474,0.00007577358],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015448323,0.00039374203,0.00029651745,0.00026110915,0.00011759009,0.0004942116,0.0002922283,0.00053961645,0.0038238731],"category_scores_gemma":[0.00015732207,0.0001663697,0.0003502771,0.00014233112,0.00034196093,0.00036054707,0.00021693319,0.0011933435,0.00093074655],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038071672,0.00009808725,0.00029819968,0.00011023514,0.000015016896,0.00003768819,0.000012277397,0.00014041174,0.996018,0.00009468008,0.00019423664,0.0026005164],"study_design_scores_gemma":[0.000063238294,0.0014391582,0.003705378,0.000016467424,0.000048222566,0.0003168628,0.000043076183,0.0011427597,0.98931867,0.00007825497,0.0038201383,0.000007860962],"about_ca_topic_score_codex":0.00018199747,"about_ca_topic_score_gemma":0.00020516549,"teacher_disagreement_score":0.0038238731,"about_ca_system_score_codex":0.00027448006,"about_ca_system_score_gemma":0.00017240644,"threshold_uncertainty_score":0.01279217},"labels":[],"label_agreement":null},{"id":"W4406468796","doi":"10.1080/14796694.2024.2441107","title":"Open-label, phase Ia study of STING agonist BI 1703880 plus ezabenlimab for patients with advanced solid tumors","year":2025,"lang":"en","type":"article","venue":"Future Oncology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Center for Advancing Translational Sciences; Eli Lilly Japan; Chugai Pharmaceutical; EMD Serono; Genentech; Sierra Oncology; Sun Pharma; Rakuten Medical; STCube; FibroGen; Astellas Pharma; Eisai; Regeneron Pharmaceuticals; Natera; Relay Therapeutics; Seagen; Actuate Therapeutics; BeiGene; Taiho Pharmaceutical; Kyowa Kirin Pharmaceutical Development; Pfizer; Incyte; Daiichi Sankyo Europe; Servier; Gilead Sciences; Japan Society for the Promotion of Science; GlaxoSmithKline; Mersana Therapeutics; Japan Agency for Medical Research and Development; Roivant Sciences; Amgen; AstraZeneca; Ono Pharmaceutical; Eli Lilly and Company; Bristol-Myers Squibb","keywords":"Medicine; Agonist; Sting; Open label; Oncology; Internal medicine; Receptor; Clinical trial","score_opus":0.016672539311782555,"score_gpt":0.36328153072606967,"score_spread":0.34660899141428714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406468796","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.977111,0.0031268261,0.0017038832,0.0008623717,0.00038999168,0.0075089354,0.002536061,0.00034397907,0.0064170603],"genre_scores_gemma":[0.977089,0.0020023212,0.0032477553,0.0012376881,0.00028350356,0.0059675095,0.002517644,0.000051423205,0.007603069],"study_design_codex":"randomized_trial","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.99972457,0.000106975174,0.000012858518,0.000048683378,0.000029514506,0.00007732893],"domain_scores_gemma":[0.9995523,0.000052011994,0.00007675,0.000038511113,0.000033961896,0.00024643572],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011644418,0.001383159,0.0018305593,0.0004007971,0.0004885603,0.00091811444,0.0007228922,0.0011325544,0.0057223896],"category_scores_gemma":[0.00063523964,0.0005409345,0.00065495033,0.0003918486,0.0008933413,0.0011283283,0.00029243284,0.002889985,0.0012959377],"study_design_candidate":"nonrandomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.71170443,0.106244825,0.0032993879,0.0010833298,0.0009424401,0.00025158402,0.0003224147,0.0029130632,0.047559444,0.00089204445,0.009373319,0.11541376],"study_design_scores_gemma":[0.52290124,0.45977715,0.0049219322,0.000045175315,0.00019708955,0.0002087635,0.00008077685,0.0018107268,0.0038076658,0.0005108661,0.005711962,0.00002664693],"about_ca_topic_score_codex":0.00091323955,"about_ca_topic_score_gemma":0.0029943562,"teacher_disagreement_score":0.0057223896,"about_ca_system_score_codex":0.00092780293,"about_ca_system_score_gemma":0.0017544299,"threshold_uncertainty_score":0.019143343},"labels":[],"label_agreement":null},{"id":"W4406537827","doi":"10.1016/s0967-0653(98)82432-0","title":"10.1016/s0967-0653(98)82432-0","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Business","score_opus":0.0060998680378967825,"score_gpt":0.1841977562977071,"score_spread":0.17809788825981032,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406537827","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00043565655,0.00044999446,0.000522688,0.00037849686,0.00033992383,0.00010755721,0.0004263374,0.00066323153,0.9966761],"genre_scores_gemma":[0.0004603632,0.00020682231,0.0002750126,0.00020279261,0.00008444089,0.000051453975,0.00023750566,0.000117943084,0.9983637],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993001,0.000047858353,0.00006193768,0.00024295137,0.0001893219,0.00015783687],"domain_scores_gemma":[0.99732745,0.0006428255,0.00017665248,0.00028840185,0.00054540235,0.0010192615],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0012678523,0.0030692373,0.0020854364,0.0029402506,0.0027269502,0.004202671,0.00332141,0.0064745285,0.9892616],"category_scores_gemma":[0.0017461244,0.0011359509,0.001837452,0.0023495292,0.002296181,0.005676003,0.0034158358,0.0032622465,0.9917087],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005077219,0.00030853078,0.0008665962,0.0007397123,0.000050951243,0.00029417494,0.00013904218,0.00043091318,0.0026185303,0.005828301,0.35857436,0.62964123],"study_design_scores_gemma":[0.000068063375,0.00016456618,0.00078900706,0.00040689603,0.000015779267,0.00041303577,0.0001343296,0.00016971352,0.00032236293,0.0005853165,0.996906,0.00002507147],"about_ca_topic_score_codex":0.0036554257,"about_ca_topic_score_gemma":0.0030641146,"teacher_disagreement_score":0.010738373,"about_ca_system_score_codex":0.0011322933,"about_ca_system_score_gemma":0.0010558049,"threshold_uncertainty_score":0.015316904},"labels":[],"label_agreement":null},{"id":"W4406744263","doi":"","title":"MEF2 and COUP-TFII cooperate to regulate Akr1c14 gene expression in mouse MA-10 Leydig cells","year":2015,"lang":"en","type":"article","venue":"","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval","funders":"","keywords":"Gene; Cell biology; Leydig cell; Expression (computer science); Gene expression; Biology; Genetics; Computer science; Endocrinology; Hormone","score_opus":0.019067717130362958,"score_gpt":0.24443161933739935,"score_spread":0.2253639022070364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406744263","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98265153,0.0051234798,0.0049513644,0.00015674818,0.00009984972,0.000026091931,0.0009207702,0.00021851236,0.0058516413],"genre_scores_gemma":[0.9783076,0.0007458483,0.0025578567,0.00008793233,0.000039954506,0.000031524527,0.0009530992,0.000080279126,0.01719586],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995943,0.000055277953,0.000034118497,0.00009328551,0.00009231941,0.00013077572],"domain_scores_gemma":[0.99967015,0.000054843462,0.00006582704,0.000047725316,0.000059856797,0.00010167322],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024478577,0.00039597604,0.00034782395,0.00065809407,0.0003238527,0.0007508472,0.00035665432,0.00037576177,0.0023500044],"category_scores_gemma":[0.00017025071,0.00031805382,0.0004520719,0.0002575154,0.0003388161,0.00039099858,0.0004631726,0.0006302624,0.00148596],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053372853,0.000004399819,0.00031019183,0.00001195461,0.0000031123961,0.000035278852,0.000011197089,0.000011757391,0.9991068,0.00007567199,0.000018236462,0.0003580041],"study_design_scores_gemma":[0.0000114650875,0.0000768401,0.014842001,0.000008044189,0.000016160657,0.00024890353,0.00009258896,0.0003591146,0.98233527,0.000043163036,0.0019601756,0.0000062264317],"about_ca_topic_score_codex":0.001335231,"about_ca_topic_score_gemma":0.0022882288,"teacher_disagreement_score":0.0023500044,"about_ca_system_score_codex":0.00048809295,"about_ca_system_score_gemma":0.00028360906,"threshold_uncertainty_score":0.007861555},"labels":[],"label_agreement":null},{"id":"W4406805610","doi":"10.1038/s43018-024-00900-3","title":"TRIM28-dependent developmental heterogeneity determines cancer susceptibility through distinct epigenetic states","year":2025,"lang":"en","type":"article","venue":"Nature Cancer","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; National Institutes of Health; National Cancer Institute; National Human Genome Research Institute; Max-Planck-Gesellschaft","keywords":"Epigenetics; Cancer; Biology; Genetics; Epigenesis; DNA methylation; Evolutionary biology; Gene; Gene expression","score_opus":0.013358338082224872,"score_gpt":0.32435775073109074,"score_spread":0.3109994126488659,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406805610","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963748,0.0003438294,0.0021345485,0.000048368303,0.0000061939827,0.000010037914,0.00029882474,0.00005929335,0.00072405953],"genre_scores_gemma":[0.99729604,0.0002060329,0.0009516309,0.000035214205,0.0000025526533,0.000011420305,0.00023612712,0.000018713097,0.0012423004],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989164,0.000014111431,0.00000886161,0.00003539192,0.00002328042,0.000026778534],"domain_scores_gemma":[0.99973816,0.000036151796,0.00009696458,0.000033310123,0.000020359934,0.000075033815],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012162722,0.00016947441,0.00013753156,0.00042814153,0.000120641474,0.00023513514,0.00017933107,0.00030267748,0.0011759446],"category_scores_gemma":[0.00014360384,0.0001841582,0.00019076205,0.00010153964,0.00022731803,0.00014661152,0.00033890287,0.00050964253,0.00021887975],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057633926,0.000008043992,0.001910902,0.0000071790937,0.0000030595004,0.00004668869,0.00001260386,0.000031004147,0.99706715,0.00008988588,0.000016336573,0.0007495291],"study_design_scores_gemma":[0.000016922975,0.0002916404,0.13089758,0.000010290236,0.00003861576,0.0011733829,0.000108529995,0.0018013845,0.8634814,0.00031738673,0.0018470953,0.000015829673],"about_ca_topic_score_codex":0.0004497266,"about_ca_topic_score_gemma":0.001131993,"teacher_disagreement_score":0.0011759446,"about_ca_system_score_codex":0.00022210358,"about_ca_system_score_gemma":0.0001359317,"threshold_uncertainty_score":0.0039339066},"labels":[],"label_agreement":null},{"id":"W4407057737","doi":"10.1101/2025.01.31.633084","title":"Ku suppresses RNA-mediated innate immune responses in human cells to accommodate primate-specific Alu expansion","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Innate immune system; Immune system; Primate; Alu element; RNA; Biology; Immunology; Virology; Neuroscience; Genetics; Human genome; Gene; Genome","score_opus":0.01614022801894748,"score_gpt":0.25193527148274836,"score_spread":0.23579504346380087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407057737","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.981743,0.004805558,0.0049433177,0.00022418887,0.000056915338,0.00010076249,0.00064410205,0.0006987156,0.0067836125],"genre_scores_gemma":[0.99428916,0.00058614876,0.0016000486,0.0000776499,0.00002350642,0.000058854977,0.0007214753,0.000053724845,0.0025895042],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976104,0.00006889149,0.000024927558,0.000053230902,0.000050304126,0.000041646592],"domain_scores_gemma":[0.999821,0.000045395696,0.00003755788,0.000052469237,0.00001437642,0.000029226487],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003593154,0.00029602597,0.00041811517,0.0003289927,0.00025061745,0.0005158942,0.00022870349,0.00027136618,0.004750837],"category_scores_gemma":[0.00027410348,0.00017636451,0.00020884543,0.00020073986,0.00031117693,0.0001434682,0.00023226702,0.00047238093,0.0011537133],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033133957,0.000057141333,0.00034950508,0.000057353765,0.000016356691,0.00014602437,0.000057047517,0.0001898538,0.99383223,0.00050678494,0.00033971557,0.0041166074],"study_design_scores_gemma":[0.000072390874,0.00096916175,0.003719367,0.000014611001,0.00004699611,0.0018627561,0.000053231484,0.0021316782,0.96345854,0.0001764003,0.027484735,0.000010188767],"about_ca_topic_score_codex":0.000539735,"about_ca_topic_score_gemma":0.0005315198,"teacher_disagreement_score":0.004750837,"about_ca_system_score_codex":0.00026402404,"about_ca_system_score_gemma":0.00022878681,"threshold_uncertainty_score":0.015893161},"labels":[],"label_agreement":null},{"id":"W4407070221","doi":"10.1172/jci174910","title":"Lactobacillus rhamnosus GG induces STING-dependent IL-10 in intestinal monocytes and alleviates inflammatory colitis in mice","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Cancer Institute; Agricultural Science and Technology Innovation Program; National Key Research and Development Program of China","keywords":"Lactobacillus rhamnosus; Colitis; Sting; Immunology; Microbiology; Medicine; Inflammatory Bowel Diseases; Lactobacillus; Monocyte; Inflammatory bowel disease; Biology; Internal medicine; Bacteria","score_opus":0.047076617500409125,"score_gpt":0.3401831277703086,"score_spread":0.2931065102698995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407070221","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991799,0.001891387,0.0028431586,0.00038718208,0.00007287675,0.00009086237,0.0005995967,0.00030831352,0.0020077215],"genre_scores_gemma":[0.99110293,0.0011905563,0.003340289,0.00023129277,0.00002585377,0.00010607397,0.0005996987,0.000032255968,0.0033710478],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997743,0.000055697517,0.000022222022,0.000026158881,0.000039716113,0.0000819968],"domain_scores_gemma":[0.9998902,0.0000067825035,0.0000319312,0.0000117762975,0.000008009351,0.000051249073],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021411873,0.0005035906,0.0003531649,0.00036389317,0.00011886786,0.00024056532,0.00013034751,0.00028415685,0.0011767889],"category_scores_gemma":[0.000090753834,0.00019086813,0.0003017503,0.0001606011,0.000298386,0.00014188071,0.00022610299,0.0012564218,0.00047904326],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001069136,0.00020956344,0.00023228502,0.000070323134,0.000006213412,0.000062230225,0.00002034137,0.0000556737,0.99491537,0.00004365905,0.000095213734,0.0032200718],"study_design_scores_gemma":[0.00023785843,0.0049056956,0.008377394,0.00002713711,0.000035504312,0.0002848789,0.00007956356,0.0010831308,0.9821493,0.00009105963,0.0027185525,0.000009864807],"about_ca_topic_score_codex":0.00055127434,"about_ca_topic_score_gemma":0.0016209123,"teacher_disagreement_score":0.0011767889,"about_ca_system_score_codex":0.00022274128,"about_ca_system_score_gemma":0.00033988242,"threshold_uncertainty_score":0.003936708},"labels":[],"label_agreement":null},{"id":"W4407373527","doi":"10.1016/j.celrep.2025.115298","title":"Cellular rejuvenation protects neurons from inflammation-mediated cell death","year":2025,"lang":"en","type":"article","venue":"Cell Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; McGill University; Université Laval; Montreal Neurological Institute and Hospital","funders":"Institute of Neurosciences, Mental Health and Addiction; National Institute on Aging; Canadian Institutes of Health Research; National Institutes of Health; Canada Research Chairs; Foundation for the National Institutes of Health; Glenn Foundation for Medical Research; Multiple Sclerosis Society of Canada; Fondation pour la Recherche Médicale; Canada Foundation for Innovation; National Multiple Sclerosis Society","keywords":"Biology; Cell biology; Neuroprotection; Transcriptome; Programmed cell death; Neuroscience; Neuroinflammation; Experimental autoimmune encephalomyelitis; Inflammation; Immunology; Gene expression; Genetics; Gene","score_opus":0.007207052500898058,"score_gpt":0.21289179228565272,"score_spread":0.20568473978475466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407373527","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959667,0.001981907,0.0011482674,0.00004858853,0.000017018026,0.000012265601,0.00016978288,0.000048352962,0.0006072162],"genre_scores_gemma":[0.99537885,0.0017887697,0.0010682333,0.000053717547,0.00000923749,0.000022959584,0.0002972054,0.000011862824,0.0013692314],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999285,0.000009750297,0.0000060682933,0.000017469878,0.000015632873,0.000022635768],"domain_scores_gemma":[0.99995685,0.0000051552965,0.00001365173,0.0000083985715,0.0000056862004,0.000010140539],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010455465,0.00024614224,0.00026943805,0.00014586576,0.00009689451,0.0002340836,0.000113185255,0.00017610037,0.000546922],"category_scores_gemma":[0.000053739408,0.000058689966,0.0001723979,0.00007800013,0.00016405463,0.00014453054,0.000117513424,0.00029220156,0.00014304365],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000069953094,0.000011699681,0.0001365128,0.000025185082,0.0000040503373,0.00001620886,0.000010221747,0.00002799433,0.9983463,0.00002712734,0.000013420738,0.0013112348],"study_design_scores_gemma":[0.0000106909465,0.00084130396,0.010941638,0.000015672003,0.00002894362,0.0001971713,0.00006871871,0.0002588273,0.98519367,0.000087230874,0.0023524615,0.0000037524635],"about_ca_topic_score_codex":0.00017948159,"about_ca_topic_score_gemma":0.00041356773,"teacher_disagreement_score":0.000546922,"about_ca_system_score_codex":0.00011852095,"about_ca_system_score_gemma":0.00012459561,"threshold_uncertainty_score":0.0018296838},"labels":[],"label_agreement":null},{"id":"W4407671567","doi":"10.24272/j.issn.2095-8137.2024.360","title":"&lt;i&gt;Zic3&lt;/i&gt; represses anterior digit development in tetrapods","year":2025,"lang":"en","type":"article","venue":"动物学研究","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Arithmetic; Computer science; Biology; Mathematics","score_opus":0.009539163992349787,"score_gpt":0.251071533813136,"score_spread":0.24153236982078624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407671567","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9808859,0.0026175082,0.0062123677,0.00021763686,0.000067728404,0.000037897633,0.0038371983,0.00047359784,0.0056500635],"genre_scores_gemma":[0.9820873,0.0011726059,0.0033220493,0.00026172935,0.000015404941,0.0000522389,0.0032870336,0.00020029531,0.009601202],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998324,0.0000060595794,0.000013133668,0.00006382677,0.000048553604,0.000036020363],"domain_scores_gemma":[0.9998801,0.000012345014,0.000041563224,0.000014537868,0.000011776628,0.00003960472],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006815892,0.00031516756,0.00023812563,0.0002825794,0.00019314594,0.000430686,0.00029531983,0.00023557362,0.001986596],"category_scores_gemma":[0.00009267238,0.0002222864,0.00029194733,0.00019507615,0.00039266737,0.0001221606,0.00026075414,0.0007749906,0.00073403504],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029517701,0.0000034404056,0.00015148337,0.000022390148,0.000003131599,0.000025410493,0.0000060443335,0.000032999986,0.99904364,0.00007335134,0.000051634073,0.00055694487],"study_design_scores_gemma":[0.000026168493,0.00006719929,0.030882658,0.0000111004265,0.000028097273,0.00025705076,0.00005076752,0.0012570194,0.95862716,0.00005795621,0.008725031,0.000009801101],"about_ca_topic_score_codex":0.006284808,"about_ca_topic_score_gemma":0.010417729,"teacher_disagreement_score":0.006284808,"about_ca_system_score_codex":0.0005908076,"about_ca_system_score_gemma":0.0004242144,"threshold_uncertainty_score":0.012496471},"labels":[],"label_agreement":null},{"id":"W4407828615","doi":"10.3389/fimmu.2025.1557632","title":"Two rare mutations in homozygosity synergize to silence TREX1 in Aicardi-Goutières syndrome","year":2025,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre; Children's Hospital Research Institute of Manitoba; University of Manitoba","funders":"","keywords":"Silence; Medicine; Genetics; Biology; Art","score_opus":0.0052236289449188325,"score_gpt":0.24399181905496523,"score_spread":0.23876819011004638,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407828615","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956649,0.00049940875,0.0018359775,0.00018950428,0.000047966718,0.000028783748,0.0002995345,0.00011876983,0.0013152893],"genre_scores_gemma":[0.99800247,0.0001008823,0.001313758,0.0000917944,0.00002734779,0.000011308,0.00011900225,0.000031065654,0.0003022894],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993326,0.00012633383,0.000091861446,0.00019886364,0.00016259144,0.00008770013],"domain_scores_gemma":[0.9992887,0.0003422829,0.0001627953,0.000043059106,0.000026218537,0.00013693687],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028275966,0.0011167763,0.0005588271,0.0012063587,0.0004718146,0.00034771388,0.0004796357,0.0015466309,0.0048641204],"category_scores_gemma":[0.00092752196,0.00020439715,0.00068372616,0.0004827287,0.00074829604,0.00017527884,0.00060581666,0.0006983129,0.0005399645],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011635711,0.00019969864,0.06951901,0.00017105312,0.0003056671,0.33985907,0.0006305612,0.00071342045,0.5721493,0.001508457,0.0008653002,0.012914852],"study_design_scores_gemma":[0.00022286034,0.00063951936,0.18031627,0.000091192844,0.00040320386,0.7008789,0.00032748914,0.0029166867,0.10878864,0.0009121124,0.004417075,0.000086059736],"about_ca_topic_score_codex":0.00055593834,"about_ca_topic_score_gemma":0.00080974784,"teacher_disagreement_score":0.0048641204,"about_ca_system_score_codex":0.00027617606,"about_ca_system_score_gemma":0.00023095946,"threshold_uncertainty_score":0.016272128},"labels":[],"label_agreement":null},{"id":"W4408025173","doi":"10.1084/jem.20242179","title":"The common HAQ STING allele prevents clinical penetrance of COPA syndrome","year":2024,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto; St. Michael's Hospital","funders":"National Center for Advancing Translational Sciences; National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of Allergy and Infectious Diseases; National Heart, Lung, and Blood Institute; Japan Society for the Promotion of Science; National Institutes of Health; Japan Science and Technology Agency; American Thoracic Society; Uehara Memorial Foundation; Takeda Science Foundation","keywords":"Sting; Allele; Penetrance; Medicine; Pathogenesis; Phenotype; Genetics; Immunology; Gene; Biology","score_opus":0.03461974165182687,"score_gpt":0.375678816418149,"score_spread":0.34105907476632213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408025173","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99786216,0.0002529706,0.0011064829,0.000038574606,0.000009647873,0.000013437045,0.00010594131,0.000059772363,0.00055116345],"genre_scores_gemma":[0.9992495,0.00006593168,0.00035847136,0.000016317743,0.000004017021,0.000004796122,0.00006424445,0.000011318222,0.00022529966],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99983525,0.000046052737,0.000022767708,0.0000322009,0.00003413532,0.000029658295],"domain_scores_gemma":[0.9997385,0.00007607574,0.000060198083,0.00003584852,0.000012940665,0.00007642501],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000118436,0.00034939128,0.00026091677,0.00025172718,0.00015222044,0.00015582166,0.00015683484,0.0003207444,0.0016660216],"category_scores_gemma":[0.00045960004,0.00009309052,0.00016742031,0.00010586821,0.0003583468,0.00008309927,0.00027529616,0.00037154692,0.00022495816],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020632955,0.000062185,0.0026977668,0.000021467702,0.000018886498,0.0018395084,0.000046804213,0.00012458753,0.98877627,0.00021512614,0.000103249964,0.005887968],"study_design_scores_gemma":[0.00023476078,0.0044147065,0.12667178,0.00004570596,0.00014559359,0.05042649,0.00021507856,0.004384842,0.804019,0.00068582746,0.008722288,0.000034048066],"about_ca_topic_score_codex":0.0004145494,"about_ca_topic_score_gemma":0.0004800981,"teacher_disagreement_score":0.0016660216,"about_ca_system_score_codex":0.00011984814,"about_ca_system_score_gemma":0.00017630952,"threshold_uncertainty_score":0.0055733323},"labels":[],"label_agreement":null},{"id":"W4408403388","doi":"10.1101/2025.03.12.642847","title":"Influenza virus antagonizes self sensing by RIG-I to enhance viral replication","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research; Burroughs Wellcome Fund; National Science Foundation","keywords":"Virology; Replication (statistics); Viral replication; Virus; Influenza A virus; RIG-I; Avian influenza virus; Influenza A virus subtype H5N1; Biology; Immune system; Genetics; Innate immune system","score_opus":0.009232444300522889,"score_gpt":0.26071465092930407,"score_spread":0.2514822066287812,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408403388","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9718631,0.004562604,0.009949546,0.0003421432,0.00023355482,0.000052092255,0.00048888684,0.00031325896,0.012194764],"genre_scores_gemma":[0.99038994,0.00066919276,0.004004403,0.00011427104,0.000027124646,0.000021690965,0.0002862671,0.00004302654,0.0044440725],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998115,0.000041375173,0.00001336237,0.00003266488,0.000049883667,0.000051241717],"domain_scores_gemma":[0.9999279,0.0000120566165,0.000017693825,0.00001706067,0.000007665187,0.000017723616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021740508,0.00034909084,0.00020440262,0.00016787814,0.00010825118,0.0003646118,0.0001766183,0.00030223772,0.0017152922],"category_scores_gemma":[0.00014427128,0.00011130398,0.0002428285,0.00006810753,0.00021137082,0.00023093283,0.0003343809,0.00057998113,0.00083315966],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004612338,0.0000073293672,0.000083441024,0.000017383614,0.000002942824,0.000020307249,0.0000036881022,0.000037775964,0.9989329,0.00024637135,0.000043398424,0.00055835885],"study_design_scores_gemma":[0.0000073536025,0.0000621443,0.0009313168,0.0000034386253,0.000004411216,0.00010399671,0.000007588644,0.0010381275,0.99593604,0.00008618244,0.0018170598,0.0000023285593],"about_ca_topic_score_codex":0.00024238648,"about_ca_topic_score_gemma":0.00036075906,"teacher_disagreement_score":0.0017152922,"about_ca_system_score_codex":0.00024255755,"about_ca_system_score_gemma":0.00017671176,"threshold_uncertainty_score":0.0057382584},"labels":[],"label_agreement":null},{"id":"W4409027752","doi":"10.1186/s13567-025-01488-x","title":"ASFV pS183L protein negatively regulates RLR-mediated antiviral signalling by blocking MDA5 oligomerisation","year":2025,"lang":"en","type":"article","venue":"Veterinary Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Key Research and Development Program of China; Fundamental Research Funds for the Central Universities; Priority Academic Program Development of Jiangsu Higher Education Institutions; Government of Jiangsu Province; China Postdoctoral Science Foundation; National Natural Science Foundation of China","keywords":"MDA5; Biology; RIG-I; Cell biology; Helicase; Virology; Receptor; Gene; Biochemistry; RNA; Innate immune system; RNA interference","score_opus":0.05624149533893335,"score_gpt":0.36045282772330284,"score_spread":0.3042113323843695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409027752","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99571157,0.0009383922,0.0022083672,0.00010925263,0.00002701084,0.000015779131,0.00025351706,0.00006339771,0.00067265925],"genre_scores_gemma":[0.9964647,0.0003689573,0.0012057313,0.000054813783,0.000007150677,0.000015867057,0.00040879613,0.000016916574,0.0014570775],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986744,0.00002572558,0.000014048999,0.000025356709,0.000032322725,0.000035073346],"domain_scores_gemma":[0.9999267,0.000012349687,0.000028042441,0.000007967112,0.000007915785,0.00001710294],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010607425,0.00032689358,0.00021961433,0.00013935368,0.00015786724,0.0002822646,0.00020923531,0.00027757674,0.00087775633],"category_scores_gemma":[0.0000768708,0.0000921826,0.00028241184,0.000090070316,0.00031776863,0.00016986819,0.00011723283,0.00046829798,0.00047661646],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054347798,0.000013699259,0.000070552225,0.0000116183965,0.0000027084793,0.000018723742,0.000006450192,0.00002793575,0.99949193,0.000035826353,0.000018794764,0.00024736737],"study_design_scores_gemma":[0.000010430142,0.00012758434,0.0015256741,0.0000031498566,0.000009221367,0.00011749285,0.00001552512,0.0006919156,0.99586135,0.000019785477,0.0016154198,0.0000023459056],"about_ca_topic_score_codex":0.00073762186,"about_ca_topic_score_gemma":0.0006740883,"teacher_disagreement_score":0.00087775633,"about_ca_system_score_codex":0.00048734632,"about_ca_system_score_gemma":0.00022919924,"threshold_uncertainty_score":0.0035359263},"labels":[],"label_agreement":null},{"id":"W4409067010","doi":"10.1101/2025.03.27.645708","title":"The ubiquitin E3 ligase Huwe1 facilitates viral and self RNA sensing by RIG-I-like receptors","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Discovery Centre","funders":"","keywords":"Ubiquitin ligase; Ubiquitin; RIG-I; RNA ligase; RNA; Receptor; Chemistry; Computational biology; Cell biology; DNA ligase; Biology; DNA; Biochemistry; Gene","score_opus":0.006742998582080829,"score_gpt":0.2107420297819678,"score_spread":0.20399903119988697,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409067010","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960334,0.0010202102,0.0022162967,0.00004790171,0.000006388119,0.000004335339,0.00012760288,0.000041163632,0.0005026831],"genre_scores_gemma":[0.9977881,0.0002024072,0.0006499163,0.000014256718,0.0000022099025,0.0000033044478,0.00018164319,0.0000080091395,0.0011500437],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998938,0.00002138464,0.0000085985985,0.000022680533,0.000021355396,0.00003221931],"domain_scores_gemma":[0.9998661,0.00002140082,0.000050281207,0.000018479263,0.00001648842,0.000027278405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001466585,0.00029296504,0.00022139231,0.00020754087,0.0001520207,0.00035828067,0.00019272098,0.00021024121,0.001154324],"category_scores_gemma":[0.00013669716,0.00013614456,0.00021345522,0.00010032139,0.00018150495,0.00031570497,0.00037751824,0.0003071583,0.00049573084],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007336341,0.000010106463,0.0005196119,0.000014967084,0.0000034873613,0.00003093902,0.0000053658896,0.00006440085,0.99841166,0.00010569612,0.000019087827,0.0007414227],"study_design_scores_gemma":[0.0000045859697,0.00005985001,0.0065073534,0.0000033083898,0.000007969452,0.00020109674,0.000019276667,0.0013108628,0.9908545,0.000051278665,0.0009774049,0.0000025664895],"about_ca_topic_score_codex":0.00018851343,"about_ca_topic_score_gemma":0.00026785745,"teacher_disagreement_score":0.001154324,"about_ca_system_score_codex":0.00028071474,"about_ca_system_score_gemma":0.00009490304,"threshold_uncertainty_score":0.0038616061},"labels":[],"label_agreement":null},{"id":"W4409124855","doi":"10.1210/endocr/bqaf066","title":"Comment on “Atlas of <i>Fshr</i> Expression From Novel Reporter Mice”","year":2025,"lang":"en","type":"article","venue":"Endocrinology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute on Aging; U.S. Department of Veterans Affairs","keywords":"Internal medicine; Endocrinology; Atlas (anatomy); Biology; Medicine; Anatomy","score_opus":0.014675720966893317,"score_gpt":0.26660781095070185,"score_spread":0.25193208998380856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409124855","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000383393,0.0011514416,0.00082225935,0.9138704,0.080682404,0.000034759185,0.00028200666,0.0002985617,0.0024748673],"genre_scores_gemma":[0.0011200233,0.0005919569,0.00034384188,0.9608255,0.028433021,0.000074860414,0.000093221104,0.00007474199,0.008442725],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9962509,0.0005786133,0.00038052624,0.00076288986,0.0013761233,0.0006509686],"domain_scores_gemma":[0.9865319,0.0069335825,0.0013046315,0.0004920373,0.0030237357,0.0017141553],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0068262373,0.0013783376,0.0013534939,0.0012979957,0.0041192966,0.003493773,0.002958637,0.048996422,0.01053007],"category_scores_gemma":[0.024894081,0.0009918276,0.0023709428,0.0007711392,0.0041083586,0.0030904291,0.0035201553,0.044611223,0.009284289],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053921067,0.000010708414,0.00015172447,0.000058544992,0.000011579606,0.00022857901,0.000070765374,0.000045443645,0.00081613776,0.0015256858,0.9946806,0.002346311],"study_design_scores_gemma":[0.000056344277,0.000042225234,0.001000623,0.00015478188,0.000032889813,0.00032935376,0.0001656815,0.0001229649,0.0012307216,0.0027168966,0.99409443,0.00005318218],"about_ca_topic_score_codex":0.011709409,"about_ca_topic_score_gemma":0.013872993,"teacher_disagreement_score":0.048996422,"about_ca_system_score_codex":0.003742493,"about_ca_system_score_gemma":0.0034672157,"threshold_uncertainty_score":0.036101043},"labels":[],"label_agreement":null},{"id":"W4409148532","doi":"10.1038/s41598-025-89312-6","title":"Human type I interferons protect Vero E6 and ARPE-19 cells against West Nile virus and are neutralized by pathogenic autoantibodies","year":2025,"lang":"en","type":"article","venue":"Scientific Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Hospital Foundation","funders":"Ministero della Salute; Fondazione IRCCS Policlinico San Matteo","keywords":"Vero cell; Virology; Interferon; Neutralizing antibody; Antibody; Autoantibody; Biology; Pathogenesis; Virus; Cell culture; Immunology; Interferon type I; In vitro","score_opus":0.010711162970767147,"score_gpt":0.25927886826961116,"score_spread":0.248567705298844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409148532","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97440594,0.0044051693,0.012223151,0.00021168163,0.00014417851,0.00013129694,0.0025657623,0.00016140299,0.005751429],"genre_scores_gemma":[0.9707244,0.0028491635,0.012496827,0.0002734902,0.00006338057,0.00020106182,0.0060687275,0.00005300505,0.007269945],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993412,0.00018874001,0.000105355735,0.00010144474,0.00018409675,0.000079182646],"domain_scores_gemma":[0.99967086,0.00009785437,0.00007472763,0.00009418015,0.000038381,0.000024055329],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003846971,0.00071254,0.00033576394,0.0003217407,0.00014651885,0.00044146876,0.00029099445,0.0004348802,0.0022027045],"category_scores_gemma":[0.00040318913,0.00015879709,0.00034279242,0.0002750745,0.00021337812,0.0002649073,0.00023342234,0.0006942916,0.0008877707],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015325916,0.00008143399,0.0005159591,0.000056438454,0.000011946271,0.00006516552,0.00003072734,0.000051967665,0.9973393,0.00006348306,0.000084371626,0.0015460222],"study_design_scores_gemma":[0.0000233013,0.000734887,0.0090848785,0.000017053937,0.000020513633,0.00060270185,0.000040455172,0.00063529063,0.9846752,0.00007165467,0.004085732,0.000008180788],"about_ca_topic_score_codex":0.00039178322,"about_ca_topic_score_gemma":0.00046547697,"teacher_disagreement_score":0.0022027045,"about_ca_system_score_codex":0.00010531624,"about_ca_system_score_gemma":0.00010220371,"threshold_uncertainty_score":0.007368803},"labels":[],"label_agreement":null},{"id":"W4409271147","doi":"10.1111/scd.70026","title":"Diagnostic Odyssey and Full Mouth Rehabilitation of a Juvenile Patient With IFIH1‐Related Disorder: A Case of Aicardi‐Goutières and Singleton Merten Syndromes Overlap","year":2025,"lang":"en","type":"article","venue":"Special Care in Dentistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University","funders":"","keywords":"Medicine; Rehabilitation; Dentistry; Mandible (arthropod mouthpart); Orthodontics; Physical therapy","score_opus":0.002883605471156425,"score_gpt":0.22312232298244325,"score_spread":0.22023871751128682,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409271147","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99310863,0.0016146174,0.0010810862,0.0005379699,0.00007572411,0.000044106295,0.00006927528,0.000048845297,0.003419645],"genre_scores_gemma":[0.9982663,0.0003097633,0.0006928838,0.00016028632,0.00008814995,0.000008988954,0.00003176308,0.00000857912,0.00043325147],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99949574,0.000043038184,0.000063759784,0.00012848106,0.00009435387,0.00017456614],"domain_scores_gemma":[0.9992575,0.00019493196,0.00019890653,0.000044947803,0.00004038851,0.00026334584],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028536798,0.0012017459,0.0007877117,0.0014202482,0.001935239,0.00079799426,0.0005430425,0.002332174,0.0018841845],"category_scores_gemma":[0.0018746101,0.0006564488,0.00063083833,0.0006905039,0.0009866107,0.00093640503,0.0013591141,0.0013536311,0.0003273227],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027196329,0.000022034825,0.013802916,0.000016418691,0.0000044335898,0.9834124,0.00021839207,0.000029049708,0.0013107687,0.00010099469,0.00007293755,0.0009825109],"study_design_scores_gemma":[0.000005195214,0.000028638606,0.006517346,0.0000068270133,0.0000046972546,0.9927892,0.00012139603,0.0000897807,0.00020223364,0.00005657421,0.00017408909,0.0000040249233],"about_ca_topic_score_codex":0.0018837613,"about_ca_topic_score_gemma":0.0030727657,"teacher_disagreement_score":0.002332174,"about_ca_system_score_codex":0.00080961164,"about_ca_system_score_gemma":0.00078515173,"threshold_uncertainty_score":0.006303251},"labels":[],"label_agreement":null},{"id":"W4409360271","doi":"10.14785/lymphosign-2025-0002","title":"A potential novel genetic etiology of autoimmune encephalopathy","year":2025,"lang":"en","type":"article","venue":"LymphoSign Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Etiology; Encephalopathy; Medicine; Immunology; Neuroscience; Biology; Pathology; Internal medicine","score_opus":0.005445090051557517,"score_gpt":0.22951958484497922,"score_spread":0.2240744947934217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409360271","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98298657,0.0045677507,0.0033609797,0.0019624988,0.00013846501,0.00004942252,0.00049189245,0.000105871186,0.006336465],"genre_scores_gemma":[0.9958495,0.0010340977,0.001374485,0.00038318988,0.0003161861,0.000013218154,0.00034436004,0.000012427839,0.00067250285],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.999777,0.000035963174,0.00003447983,0.00005909184,0.000025431522,0.000068111],"domain_scores_gemma":[0.9995685,0.00013620952,0.00016440914,0.000026850215,0.000041497406,0.00006248222],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017727933,0.0008245183,0.00043553716,0.0011026706,0.0006294304,0.0005793626,0.00042149634,0.0012850203,0.0048226677],"category_scores_gemma":[0.0009650513,0.00014902807,0.00043298633,0.0010057531,0.0005367146,0.00050963624,0.00045346637,0.00064262457,0.0006060015],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044738222,0.00023762083,0.2297309,0.00022489637,0.00015837248,0.73001266,0.00035194473,0.0003502276,0.018362544,0.0036274283,0.0013857933,0.015110294],"study_design_scores_gemma":[0.00005733018,0.0001946292,0.08651722,0.00013823183,0.0002178366,0.8979508,0.0004115898,0.0013336221,0.0051544295,0.0030522128,0.004939603,0.000032448566],"about_ca_topic_score_codex":0.0005533881,"about_ca_topic_score_gemma":0.0004043097,"teacher_disagreement_score":0.0048226677,"about_ca_system_score_codex":0.00033808884,"about_ca_system_score_gemma":0.00038795147,"threshold_uncertainty_score":0.016133428},"labels":[],"label_agreement":null},{"id":"W4409468606","doi":"10.1016/j.isci.2025.112430","title":"Multiple sclerosis severity variant in DYSF-ZNF638 locus associates with neuronal loss and inflammation","year":2025,"lang":"en","type":"article","venue":"iScience","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"Stichting MS Research","keywords":"Multiple sclerosis; Inflammation; Locus (genetics); Neuroscience; Biology; Genetics; Medicine; Immunology; Gene","score_opus":0.011334825396171548,"score_gpt":0.21966965045454503,"score_spread":0.20833482505837347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409468606","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99953747,0.00010949319,0.00009719515,0.00002257846,0.0000029107325,0.000003146688,0.00007853228,0.0000026255357,0.00014604809],"genre_scores_gemma":[0.99957126,0.00004169535,0.00010685804,0.0000126318755,0.0000060900766,0.0000031800946,0.000094529685,0.0000026339835,0.00016109699],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99971324,0.00007305649,0.000036617203,0.000095681564,0.000051386567,0.000030105128],"domain_scores_gemma":[0.9994259,0.000103728176,0.00030905378,0.000042819305,0.00003531759,0.000083314146],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028982243,0.0005632908,0.00039968736,0.00075691665,0.0003068975,0.00034713527,0.0002541729,0.0005477638,0.0021548541],"category_scores_gemma":[0.00096592976,0.00018271105,0.0002981588,0.0006821433,0.0002865146,0.00014623468,0.00027905524,0.000304837,0.00020365792],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0033784874,0.00013619335,0.90058774,0.00005999887,0.00030375706,0.0040541,0.0003999902,0.00029277825,0.084048875,0.00016511159,0.0002749715,0.0062979916],"study_design_scores_gemma":[0.000048018268,0.00025567441,0.9909411,0.000015232323,0.00008457718,0.005375125,0.00011968177,0.0004574991,0.002186848,0.00021527849,0.000292984,0.000007921152],"about_ca_topic_score_codex":0.0026454788,"about_ca_topic_score_gemma":0.0026784167,"teacher_disagreement_score":0.0026454788,"about_ca_system_score_codex":0.00021089069,"about_ca_system_score_gemma":0.00013703726,"threshold_uncertainty_score":0.007208705},"labels":[],"label_agreement":null},{"id":"W4409622108","doi":"10.1007/s12032-025-02731-3","title":"Retraction Note: TNFR2 antagonist and agonist: a potential therapeutics in cancer immunotherapy","year":2025,"lang":"en","type":"article","venue":"Medical Oncology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":true,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Emergent BioSolutions (Canada)","funders":"","keywords":"Hematology; Agonist; Medicine; Immunotherapy; Antagonist; Cancer immunotherapy; Cancer; Internal medicine; Pharmacology; Receptor","score_opus":0.013129164818774639,"score_gpt":0.347761619960803,"score_spread":0.3346324551420284,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409622108","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00025646563,0.008466637,0.0003849603,0.26016366,0.72858495,0.000023901031,0.00013401633,0.000058196303,0.001927274],"genre_scores_gemma":[0.0036883464,0.010369582,0.0009867406,0.14924958,0.79818636,0.00006479437,0.00014809727,0.00006858553,0.03723789],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99714655,0.0004559219,0.00060557586,0.00033347687,0.0011293541,0.00032910332],"domain_scores_gemma":[0.98057896,0.008070196,0.0014450006,0.0006374094,0.007518122,0.0017502569],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0037504663,0.0020631244,0.0026669088,0.0014269107,0.0019083711,0.0026041747,0.0026740765,0.019296244,0.0075577674],"category_scores_gemma":[0.027632136,0.0009316027,0.0016065922,0.0011735327,0.0020827083,0.002668492,0.0012890268,0.028921613,0.009718053],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000309452,0.000005996405,0.000050024613,0.00010358996,0.000009252529,0.00035793008,0.000017843018,0.00003065415,0.00015358081,0.00042878493,0.99143547,0.007375877],"study_design_scores_gemma":[0.000036175486,0.00003886215,0.0006338233,0.00020193408,0.000038079786,0.001276287,0.000048854537,0.00023652092,0.00028554586,0.0006684243,0.99650913,0.00002634331],"about_ca_topic_score_codex":0.0037962496,"about_ca_topic_score_gemma":0.005842941,"teacher_disagreement_score":0.9807038,"about_ca_system_score_codex":0.0036854604,"about_ca_system_score_gemma":0.0036874271,"threshold_uncertainty_score":0.026740015},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"not_applicable","genre":"other","about_ca_system":false,"about_ca_topic":false,"confidence":"high"},{"model":"gpt","categories":[],"domain":null,"study_design":"not_applicable","genre":"editorial","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"agree"},{"id":"W4409625264","doi":"10.1158/1538-7445.am2025-717","title":"Abstract 717: Pan-cancer analysis of <i>TRIM37</i> copy-number and development of fit-for-screening in situ hybridization tools","year":2025,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Aegera Therapeutics (Canada)","funders":"","keywords":"Cancer; In situ hybridization; Biology; Genetics; Oncology; Computational biology; Medicine; Gene; Gene expression","score_opus":0.10978580150785106,"score_gpt":0.43191221375166106,"score_spread":0.32212641224381,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409625264","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80089384,0.0040821005,0.14901504,0.00076937245,0.00011091865,0.000526378,0.022217968,0.00740529,0.01497902],"genre_scores_gemma":[0.84726506,0.0014224494,0.114408866,0.0004771746,0.00004626752,0.0007567566,0.023431,0.0008467427,0.011345657],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99962986,0.000048411734,0.000031270498,0.00012710302,0.00011218631,0.00005128393],"domain_scores_gemma":[0.9997427,0.00006096657,0.000056603272,0.000049871916,0.000053231393,0.00003663047],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006175078,0.00037423847,0.00032711308,0.0012174676,0.0003603828,0.0004900072,0.00044938287,0.00048197876,0.009366357],"category_scores_gemma":[0.00047512754,0.0002537796,0.00026054814,0.0007219576,0.00024853655,0.0003058343,0.0003315959,0.00046577683,0.0020549353],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009867404,0.000013853294,0.0019621206,0.00007800907,0.000012374438,0.000055478802,0.000016679915,0.00011780445,0.99070084,0.00015086556,0.0007173724,0.006075906],"study_design_scores_gemma":[0.000027038137,0.00018608426,0.044329703,0.000018366085,0.000048256712,0.0010778449,0.000043470427,0.0041928524,0.93668884,0.00021172737,0.0131641105,0.000011671445],"about_ca_topic_score_codex":0.0010544072,"about_ca_topic_score_gemma":0.0029795947,"teacher_disagreement_score":0.009366357,"about_ca_system_score_codex":0.0004831368,"about_ca_system_score_gemma":0.00024781132,"threshold_uncertainty_score":0.031333625},"labels":[],"label_agreement":null},{"id":"W4409625903","doi":"10.1158/1538-7445.am2025-2917","title":"Abstract 2917: Utilizing artificial intelligence for the discovery of a novel CNS-penetrating ATR inhibitor","year":2025,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Neuroscience; Computational biology; Biology","score_opus":0.1542960270297705,"score_gpt":0.43400845880680655,"score_spread":0.2797124317770361,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409625903","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6960542,0.0037764776,0.26659337,0.00102607,0.00030269774,0.0005669519,0.001584786,0.002064872,0.028030563],"genre_scores_gemma":[0.79113233,0.0026827466,0.1902848,0.00028694762,0.00004372623,0.00030151827,0.0019836847,0.0001766889,0.013107504],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9998878,0.000011708564,0.0000051540114,0.000023590406,0.000056797846,0.000014868665],"domain_scores_gemma":[0.99992335,0.000017419712,0.000016631962,0.0000065027743,0.000019947545,0.000016071914],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030089536,0.0004506033,0.00036705955,0.00025535314,0.00012763936,0.0005215801,0.00043766137,0.0003728221,0.0021395476],"category_scores_gemma":[0.0002710427,0.0001742678,0.00039264545,0.00022980537,0.00024844508,0.00028222075,0.00039211148,0.00071298255,0.00077953434],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039355218,0.00043608597,0.0012029725,0.00049488805,0.00012556893,0.00046100642,0.000057316487,0.16263367,0.6912932,0.008972907,0.0037729212,0.13015586],"study_design_scores_gemma":[0.00016864107,0.0013451492,0.0006968374,0.000021755026,0.00007144425,0.0002927544,0.000012462349,0.46954176,0.50609225,0.0017551902,0.019959558,0.000042158183],"about_ca_topic_score_codex":0.00056754635,"about_ca_topic_score_gemma":0.00068596477,"teacher_disagreement_score":0.0021395476,"about_ca_system_score_codex":0.000504098,"about_ca_system_score_gemma":0.00049207517,"threshold_uncertainty_score":0.007157445},"labels":[],"label_agreement":null},{"id":"W4409626021","doi":"10.1158/1538-7445.am2025-5830","title":"Abstract 5830: Combining DNA methylation inhibition and STING agonist in the treatment of metastatic triple-negative breast cancer","year":2025,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Triple-negative breast cancer; Breast cancer; Medicine; DNA methylation; Metastatic breast cancer; Sting; Cancer research; Triple negative; Oncology; Agonist; Internal medicine; Cancer; Biology; Receptor; Gene; Genetics; Gene expression","score_opus":0.07396749196299293,"score_gpt":0.4106552030022718,"score_spread":0.33668771103927886,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409626021","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97298604,0.017953202,0.0010426999,0.0006775469,0.0003359839,0.00023971325,0.0010760706,0.00028908264,0.00539965],"genre_scores_gemma":[0.9840164,0.007578886,0.001688172,0.00042520426,0.000074515825,0.00016035666,0.0013280489,0.000032804437,0.004695708],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999491,0.000007374282,0.0000041409944,0.0000094136085,0.0000135191885,0.000016465965],"domain_scores_gemma":[0.99996793,0.000004005849,0.0000060290645,0.0000024114293,0.0000046984683,0.000014909801],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000091057314,0.0002926881,0.0005762431,0.00028283705,0.00013375719,0.00017984203,0.00019315368,0.00030456073,0.003827373],"category_scores_gemma":[0.00008680066,0.00010796737,0.0002771338,0.00017257288,0.000105827334,0.00012559067,0.00018287367,0.0008665109,0.00051344576],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0065793525,0.0015605164,0.0009667273,0.0008107013,0.0001238007,0.00035155565,0.00008899206,0.0008794131,0.8555543,0.000224379,0.0038283265,0.12903193],"study_design_scores_gemma":[0.003886307,0.038428143,0.02726029,0.00024194225,0.000591177,0.001968111,0.00019833416,0.0044974242,0.8677406,0.00041543477,0.054712337,0.000059887137],"about_ca_topic_score_codex":0.000967986,"about_ca_topic_score_gemma":0.0027760617,"teacher_disagreement_score":0.003827373,"about_ca_system_score_codex":0.00022083995,"about_ca_system_score_gemma":0.00031892708,"threshold_uncertainty_score":0.012803793},"labels":[],"label_agreement":null},{"id":"W4409629085","doi":"10.1158/1538-7445.am2025-6127","title":"Abstract 6127: Genomic instability regulates STING mediated anti-tumor immunity through distinctive cytosolic DNA structures","year":2025,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Sting; Genome instability; Immunity; DNA; Biology; Cancer research; Cell biology; DNA damage; Genetics; Immune system","score_opus":0.05216476694609487,"score_gpt":0.3804538108875052,"score_spread":0.32828904394141034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409629085","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99677795,0.00083544623,0.00067111105,0.00008478232,0.000017465878,0.000016675725,0.00029666082,0.00003146183,0.0012684978],"genre_scores_gemma":[0.9968548,0.00031553963,0.00045033192,0.000055556753,0.000010580626,0.00002193419,0.00040210783,0.000008139485,0.0018810692],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988043,0.000021155627,0.000008840046,0.000029406883,0.000025759868,0.0000344235],"domain_scores_gemma":[0.9999244,0.000011062691,0.000024256367,0.0000051653947,0.000008590051,0.000026536927],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000067087196,0.00024280768,0.00017798106,0.00015449413,0.00011757136,0.00023600887,0.00011759694,0.00021201228,0.003669253],"category_scores_gemma":[0.000075841446,0.000077060155,0.00015401465,0.000119287186,0.00023934341,0.00013539343,0.00012334363,0.00046351174,0.00062954525],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001731067,0.000019824733,0.00018769994,0.000033296605,0.0000013954768,0.000026608262,0.000007941861,0.000021837343,0.99883217,0.000047783826,0.000032187556,0.00061615236],"study_design_scores_gemma":[0.00003192405,0.0006406057,0.012272903,0.000011172451,0.000011776244,0.00020342316,0.00004634046,0.000579476,0.9844008,0.000044897286,0.0017538015,0.0000029495664],"about_ca_topic_score_codex":0.0002463458,"about_ca_topic_score_gemma":0.00028262896,"teacher_disagreement_score":0.003669253,"about_ca_system_score_codex":0.00031774287,"about_ca_system_score_gemma":0.00015518881,"threshold_uncertainty_score":0.012274921},"labels":[],"label_agreement":null},{"id":"W4409629140","doi":"10.1158/1538-7445.am2025-1734","title":"Abstract 1734: RP-1664: A potent and selective PLK4 inhibitor causing tumor regressions in TRIM37-high xenograft models of solid tumors","year":2025,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Aegera Therapeutics (Canada)","funders":"","keywords":"Solid tumor; Cancer research; Chemistry; Cancer; Medicine; Biology; Internal medicine","score_opus":0.04805494856115791,"score_gpt":0.3849947375998999,"score_spread":0.336939789038742,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409629140","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97875917,0.0028014998,0.0052413736,0.00045738462,0.00013820469,0.00024068436,0.0049576713,0.0010128074,0.006391066],"genre_scores_gemma":[0.9736704,0.0014807283,0.00579348,0.00015741593,0.000021400776,0.00018654956,0.005682552,0.000110388224,0.012897025],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999853,0.000023368715,0.00001712969,0.000024540239,0.000042724958,0.000039221133],"domain_scores_gemma":[0.9998945,0.000016660393,0.000021023845,0.000017219341,0.0000160109,0.000034682893],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022274636,0.0006395162,0.00039632333,0.00042160542,0.00016036788,0.00023652766,0.0003794739,0.00037863266,0.0031681226],"category_scores_gemma":[0.0000853364,0.00015236958,0.00025495465,0.00024937087,0.00018462376,0.00020324743,0.00012840355,0.0011601383,0.0010986939],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007181931,0.00032117713,0.0001761877,0.00011094072,0.000018700475,0.00010257561,0.000015670377,0.00027854636,0.9930334,0.00012576219,0.00087399216,0.0042247702],"study_design_scores_gemma":[0.000071975555,0.0015206074,0.0010356216,0.000004551599,0.00001833121,0.00023999794,0.000009745831,0.0005540476,0.99425703,0.00001756972,0.0022669756,0.0000035811902],"about_ca_topic_score_codex":0.0011423375,"about_ca_topic_score_gemma":0.0013124826,"teacher_disagreement_score":0.0031681226,"about_ca_system_score_codex":0.0004226646,"about_ca_system_score_gemma":0.00039445848,"threshold_uncertainty_score":0.010598481},"labels":[],"label_agreement":null},{"id":"W4409631479","doi":"10.1158/1538-7445.am2025-5431","title":"Abstract 5431: The mitochondrial protease, YME1L regulates interferon signaling and is essential for AML growth and differentiation","year":2025,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"","keywords":"Interferon; Biology; Cell biology; Protease; Cancer research; Immunology; Enzyme; Biochemistry","score_opus":0.03008880398819404,"score_gpt":0.35137233106740723,"score_spread":0.3212835270792132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409631479","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9613588,0.010463292,0.008460739,0.0011246117,0.00025898425,0.00008817229,0.01104348,0.00072686805,0.006475027],"genre_scores_gemma":[0.96703535,0.0022192167,0.0039672498,0.00028559222,0.000043846172,0.00007650534,0.010568472,0.0001240895,0.015679767],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998677,0.000012507495,0.000017718105,0.00003673266,0.000038194135,0.0000271159],"domain_scores_gemma":[0.9998865,0.000009146445,0.000046693982,0.000008921915,0.00001732801,0.00003133848],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011918395,0.00048477028,0.00034182647,0.0002209619,0.00030897398,0.0003495747,0.00020187444,0.00035412138,0.0046323137],"category_scores_gemma":[0.000112978545,0.00012923921,0.00024014502,0.0002210778,0.00018309527,0.00020236142,0.0003043825,0.0005616559,0.0024498038],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017396438,0.000013283302,0.0003460459,0.0000720879,0.0000033078754,0.00009917969,0.000010479455,0.00003486286,0.99643886,0.000089833,0.00033604828,0.0023820782],"study_design_scores_gemma":[0.000050255716,0.0001739955,0.017522685,0.000025588943,0.000017750046,0.00068489584,0.00004077213,0.0008575581,0.9645902,0.00008897269,0.015938673,0.00000863055],"about_ca_topic_score_codex":0.00043005112,"about_ca_topic_score_gemma":0.0004486974,"teacher_disagreement_score":0.0046323137,"about_ca_system_score_codex":0.00048677664,"about_ca_system_score_gemma":0.00021746373,"threshold_uncertainty_score":0.015496671},"labels":[],"label_agreement":null},{"id":"W4409632265","doi":"10.1158/1538-7445.am2025-6947","title":"Abstract 6947: CRISPR/Cas9 kinome screen identifies PNKP as a novel fitness gene in HPV-negative head and neck squamous cell carcinoma","year":2025,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Yukon University","funders":"","keywords":"CRISPR; Kinome; Head and neck squamous-cell carcinoma; Biology; Gene; Head and neck; Basal cell; Computational biology; Genetics; Cancer research; Medicine; Cancer; Head and neck cancer; Internal medicine","score_opus":0.053664108353658146,"score_gpt":0.3801940959541438,"score_spread":0.3265299876004856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409632265","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97251964,0.00059265824,0.0175465,0.0001647326,0.00006476473,0.00016396506,0.004080016,0.00065992994,0.0042076395],"genre_scores_gemma":[0.98258144,0.00040000692,0.008450918,0.00010672411,0.000004467036,0.000104365456,0.0031224762,0.00011986379,0.005109798],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997943,0.00001638349,0.000021486643,0.00005110697,0.00008801947,0.000028709479],"domain_scores_gemma":[0.99988866,0.000026248494,0.000027631311,0.000014592011,0.0000165061,0.00002641695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017524374,0.000332428,0.00039341938,0.00028032853,0.00026110615,0.00027616555,0.00025910267,0.00038739876,0.0023497],"category_scores_gemma":[0.0001956221,0.00011355412,0.00032246692,0.00018921717,0.00022442707,0.00012807155,0.00026968785,0.0004603603,0.0007461097],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056423916,0.000021357038,0.00036954798,0.00005829934,0.000007683293,0.0001718837,0.00001323096,0.00018897979,0.9969969,0.00009189355,0.00015157,0.0018721404],"study_design_scores_gemma":[0.000016207881,0.00020301368,0.008159047,0.000016127995,0.00003705852,0.0011102785,0.000043008975,0.0037806106,0.98240894,0.0000722622,0.0041364226,0.000017195724],"about_ca_topic_score_codex":0.001152874,"about_ca_topic_score_gemma":0.0018292023,"teacher_disagreement_score":0.0023497,"about_ca_system_score_codex":0.00035434545,"about_ca_system_score_gemma":0.00027629116,"threshold_uncertainty_score":0.007860541},"labels":[],"label_agreement":null},{"id":"W4409635531","doi":"10.1158/1538-7445.am2025-7130","title":"Abstract 7130: Spatially resolved single-cell analysis reveals cGAS-STING-mediated tumor-immune interactions via IFNα as determinants of pembrolizumab sensitivity in triple-negative breast cancer","year":2025,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Pembrolizumab; Immune system; Medicine; Breast cancer; Cancer; Cancer research; Triple-negative breast cancer; Oncology; Internal medicine; Immunology; Immunotherapy","score_opus":0.03616361163697846,"score_gpt":0.3670689389749576,"score_spread":0.33090532733797917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409635531","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99805605,0.00024933997,0.0008992064,0.000022226734,0.0000045372144,0.000007677663,0.00043678432,0.000032759384,0.00029148848],"genre_scores_gemma":[0.99748224,0.00008913819,0.0013265021,0.000025989302,0.0000039825304,0.000015435542,0.00062022696,0.000008245331,0.0004282685],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999323,0.000007252525,0.0000031854722,0.000022332171,0.000020865104,0.000014008729],"domain_scores_gemma":[0.99995446,0.000008241633,0.000010741963,0.0000060657667,0.00001075051,0.000009823988],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012008756,0.00009739623,0.00017295506,0.0002352511,0.00013935436,0.00024265052,0.000108409025,0.00016353656,0.0009135986],"category_scores_gemma":[0.00012299856,0.0000830196,0.000115728704,0.00018849256,0.00011009272,0.000070986556,0.000106344465,0.00017725212,0.00021957119],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028893317,0.000022015163,0.012055973,0.000032171723,0.000014062803,0.00007107869,0.000051498202,0.00026796132,0.9832811,0.000033783846,0.00016197281,0.0037194393],"study_design_scores_gemma":[0.00002913212,0.0003494383,0.6270692,0.000010013804,0.000068629895,0.0007925146,0.00033413398,0.017181968,0.3515827,0.00014572272,0.0024223696,0.000014231658],"about_ca_topic_score_codex":0.00099095,"about_ca_topic_score_gemma":0.0018740543,"teacher_disagreement_score":0.00099095,"about_ca_system_score_codex":0.00020815562,"about_ca_system_score_gemma":0.00011616455,"threshold_uncertainty_score":0.0030562878},"labels":[],"label_agreement":null},{"id":"W4409820850","doi":"10.1158/1538-7445.am2025-lb397","title":"Abstract LB397: Biomarker-guided dose selection in the iintune-1 study of dazostinag,a STING agonist, alone and in combination with pembrolizumab for patients with metastatic solid tumors","year":2025,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Pembrolizumab; Medicine; Sting; Oncology; Internal medicine; Biomarker; Agonist; Cancer; Immunotherapy; Receptor; Biology","score_opus":0.05624023280462687,"score_gpt":0.39246531508822463,"score_spread":0.33622508228359776,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409820850","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99640745,0.0009083416,0.00029499942,0.00018080672,0.00003108278,0.00086874,0.00038051652,0.00004178746,0.0008862293],"genre_scores_gemma":[0.9958334,0.00042913517,0.0009927028,0.00019599762,0.000035614015,0.0006759265,0.00056942686,0.000012251661,0.0012554767],"study_design_codex":"randomized_trial","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.99969256,0.00014027084,0.000019656838,0.000056839417,0.000038958162,0.00005176413],"domain_scores_gemma":[0.9996877,0.00004601341,0.0000838473,0.000026580561,0.000022553917,0.0001333441],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009772242,0.00078833837,0.0010644565,0.0002845942,0.00024593604,0.00087386917,0.00046267614,0.0006593563,0.0021435083],"category_scores_gemma":[0.0006413183,0.0003602667,0.0007449534,0.00028084673,0.00045228953,0.00047626704,0.0002909112,0.0018713395,0.00051456655],"study_design_candidate":"nonrandomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.5496181,0.059616186,0.01829441,0.00060744444,0.000992084,0.00026430833,0.00049124134,0.005525759,0.20706333,0.00034556107,0.0029292281,0.15425229],"study_design_scores_gemma":[0.14564835,0.7910051,0.032879677,0.00005589467,0.00065271946,0.00039116977,0.00010954652,0.0029879373,0.021282014,0.00023769637,0.004705327,0.00004465441],"about_ca_topic_score_codex":0.0005761058,"about_ca_topic_score_gemma":0.0020118314,"teacher_disagreement_score":0.0021435083,"about_ca_system_score_codex":0.0008766864,"about_ca_system_score_gemma":0.0011352294,"threshold_uncertainty_score":0.007170737},"labels":[],"label_agreement":null},{"id":"W4409839100","doi":"10.1016/j.cellsig.2025.111833","title":"STING and metabolism-related diseases: Roles, mechanisms, and applications","year":2025,"lang":"en","type":"review","venue":"Cellular Signalling","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Artificial Intelligence in Medicine (Canada)","funders":"Science Fund for Distinguished Young Scholars of Jiangxi Province; National Natural Science Foundation of China","keywords":"Computational biology; Biology; Sting; Metabolism; Biochemistry; Engineering","score_opus":0.012004208817367959,"score_gpt":0.25238092599972006,"score_spread":0.2403767171823521,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409839100","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00005659763,0.9990244,0.00007229012,0.0001844075,0.00020341316,0.000002094367,0.000014290238,0.000004603779,0.00043790473],"genre_scores_gemma":[0.00033185745,0.9986621,0.000109943896,0.00015462327,0.00032731687,0.0000030758163,0.000024491357,7.334088e-7,0.0003858264],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99987054,0.000019646901,0.000017856899,0.000024980054,0.00004983355,0.000017107983],"domain_scores_gemma":[0.99969304,0.00014027907,0.000050652885,0.000008207779,0.00006363555,0.00004416212],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000574618,0.0010406307,0.001399655,0.0016721499,0.00023186387,0.0012489021,0.0007852932,0.0011784256,0.003986136],"category_scores_gemma":[0.000562266,0.00024242436,0.00039927228,0.002062549,0.00049959694,0.0012431265,0.00076369726,0.0020956744,0.0020616858],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013368342,0.000058109337,0.00014737019,0.009550171,0.000067298686,0.00013201701,0.00003365122,0.00034551715,0.0018665197,0.0027826806,0.034457784,0.9504252],"study_design_scores_gemma":[0.000027482827,0.00010875995,0.0010496839,0.0032116345,0.00012859076,0.0009810497,0.0000591502,0.00014332087,0.00040346032,0.0024932264,0.9913697,0.000023730234],"about_ca_topic_score_codex":0.00078072783,"about_ca_topic_score_gemma":0.001904875,"teacher_disagreement_score":0.003986136,"about_ca_system_score_codex":0.0005313858,"about_ca_system_score_gemma":0.00092165795,"threshold_uncertainty_score":0.01333499},"labels":[],"label_agreement":null},{"id":"W4409854893","doi":"10.1016/j.ijbiomac.2025.143609","title":"Palmitoyl-transferase 3 promotes mitochondrial antiviral signaling protein degradation by modulating its ubiquitination","year":2025,"lang":"en","type":"article","venue":"International Journal of Biological Macromolecules","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Science Foundation of Hunan Province","keywords":"Innate immune system; Biology; RIG-I; IRF3; Cell biology; Ectopic expression; Ubiquitin; RNA interference; Signal transduction; Gene knockdown; Transcription factor; Gene; RNA; Genetics; Receptor","score_opus":0.013647409921643382,"score_gpt":0.27295527351540655,"score_spread":0.2593078635937632,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409854893","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9898492,0.0030194046,0.0035373983,0.0003422731,0.00009144494,0.000041894982,0.0010524013,0.00017661134,0.0018892988],"genre_scores_gemma":[0.99373144,0.0010054758,0.0015031254,0.000086713975,0.0000129315795,0.000035354475,0.0010961981,0.000024898569,0.002503923],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998623,0.000017540471,0.000016954597,0.000030267847,0.0000291143,0.000043857057],"domain_scores_gemma":[0.99990964,0.000009648935,0.000033475044,0.000011396624,0.000013207034,0.000022535894],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013172922,0.00031074497,0.00024816405,0.00016409093,0.00026770937,0.00027476466,0.00020405152,0.00023546182,0.0020069946],"category_scores_gemma":[0.00010153287,0.00013482862,0.00037809595,0.00021203652,0.00028308955,0.00016950529,0.00022217601,0.0005638653,0.00057502236],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00055529265,0.000050067378,0.00023207378,0.0000871368,0.000011657462,0.00004002691,0.000014126949,0.00008664491,0.9973779,0.00015675787,0.00011876275,0.0012696219],"study_design_scores_gemma":[0.00004657414,0.00016040404,0.0032056603,0.0000053431822,0.000016961694,0.00011259023,0.00002234626,0.00087280053,0.99252206,0.00006314529,0.0029667816,0.000005285905],"about_ca_topic_score_codex":0.0013397792,"about_ca_topic_score_gemma":0.0018885253,"teacher_disagreement_score":0.0020069946,"about_ca_system_score_codex":0.0005088249,"about_ca_system_score_gemma":0.0003845798,"threshold_uncertainty_score":0.0067141056},"labels":[],"label_agreement":null},{"id":"W4409987123","doi":"10.1158/0008-5472.can-24-3425","title":"Targeting Intracellular Innate RNA-Sensing Systems Overcomes Resistance to CAR T-cell Therapy in Solid Tumors","year":2025,"lang":"en","type":"article","venue":"Cancer Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ovarian Cancer Canada","funders":"European Research Council; Hector Stiftung; Bayerisches Staatsministerium für Wirtschaft und Medien, Energie und Technologie; Hector Stiftung II; Deutsche Krebshilfe; Technische Universität München; Elitenetzwerk Bayern; José Carreras Leukämie-Stiftung; Fritz-Bender-Stiftung; Jung-Stiftung für Wissenschaft und Forschung; Bundesministerium für Bildung und Forschung; Ludwig-Maximilians-Universität München; Deutsche Forschungsgemeinschaft; Wilhelm Sander-Stiftung; European Commission; Horizon 2020 Framework Programme; Else Kröner-Fresenius-Stiftung; Bayerische Forschungsstiftung; European Hematology Association; Melanoma Research Alliance","keywords":"Intracellular; Cancer research; RNA; Innate immune system; Solid tumor; Cancer; Medicine; Biology; Cell biology; Immunology; Internal medicine; Biochemistry; Gene; Immune system","score_opus":0.032080462397010075,"score_gpt":0.35226550641699284,"score_spread":0.32018504401998277,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409987123","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99444604,0.0014972235,0.0024656365,0.00010219544,0.00002677329,0.00006624058,0.000078659265,0.00019144276,0.001125706],"genre_scores_gemma":[0.9973437,0.0005919541,0.0010259709,0.0000288637,0.000009679855,0.00003310559,0.00015804476,0.000019599043,0.0007890449],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998123,0.000034860066,0.000016341077,0.000028943257,0.00004368347,0.00006387518],"domain_scores_gemma":[0.99989986,0.00002036381,0.000022642784,0.00002106705,0.000011800403,0.000024272918],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017249638,0.00033798924,0.00055930536,0.00026209335,0.00010394705,0.00040057654,0.0002015642,0.000292128,0.0008656283],"category_scores_gemma":[0.00012873136,0.00011118211,0.00025757335,0.00014637991,0.00022051886,0.0001906413,0.0001920368,0.00078546605,0.00033303737],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013843093,0.00014106123,0.00017480711,0.000047980902,0.000010654245,0.000054204233,0.000028557984,0.00028035592,0.9934995,0.00022516793,0.00007950003,0.0053198226],"study_design_scores_gemma":[0.00005382615,0.0019911034,0.0012541467,0.0000048192264,0.000036742844,0.0003174288,0.000019795132,0.002026262,0.9914479,0.000080671496,0.002762501,0.0000048978263],"about_ca_topic_score_codex":0.000329713,"about_ca_topic_score_gemma":0.00043522567,"teacher_disagreement_score":0.0008656283,"about_ca_system_score_codex":0.00021426516,"about_ca_system_score_gemma":0.00026805952,"threshold_uncertainty_score":0.002895832},"labels":[],"label_agreement":null},{"id":"W4410065085","doi":"10.1016/j.jddst.2025.107000","title":"Comparison of nose-to-brain and systemic delivery of STING agonist-loaded liposomes for glioblastoma treatment","year":2025,"lang":"en","type":"article","venue":"Journal of Drug Delivery Science and Technology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Sting; Liposome; Agonist; Glioblastoma; Pharmacology; Nose; Medicine; Biomedical engineering; Internal medicine; Nanotechnology; Materials science; Cancer research; Surgery; Engineering; Receptor","score_opus":0.011742984145398195,"score_gpt":0.29062075373340746,"score_spread":0.27887776958800925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410065085","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99678206,0.0016062264,0.0009536646,0.000045957448,0.000042952244,0.00004163122,0.000053531254,0.00002317166,0.00045087704],"genre_scores_gemma":[0.99764615,0.0010079092,0.0007187306,0.000027936305,0.0000110997535,0.00003273625,0.000059137714,0.000008750317,0.00048753133],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99994123,0.000010554338,0.000003986565,0.00001073324,0.000012011467,0.000021528527],"domain_scores_gemma":[0.99995863,0.000009807367,0.000009032402,0.0000034295135,0.000006961724,0.000012133811],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001493527,0.0002161616,0.00031560537,0.00013957937,0.00008356502,0.00023156386,0.00014387042,0.00021674338,0.00079937675],"category_scores_gemma":[0.0001454498,0.00008749566,0.00020980266,0.000101390935,0.00014804922,0.00034721405,0.00013033509,0.00040955262,0.00012669571],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0049256138,0.00041102307,0.00025263467,0.00018632182,0.00003351735,0.000062720625,0.000047427387,0.00035868245,0.9741451,0.00012193044,0.00020864945,0.019246282],"study_design_scores_gemma":[0.000520317,0.015001989,0.003463767,0.000023840541,0.00026547103,0.00020282576,0.0000868053,0.004913236,0.97283757,0.00006780931,0.0025922311,0.000024166375],"about_ca_topic_score_codex":0.00078584,"about_ca_topic_score_gemma":0.0010991471,"teacher_disagreement_score":0.00079937675,"about_ca_system_score_codex":0.0001734492,"about_ca_system_score_gemma":0.000326787,"threshold_uncertainty_score":0.002674222},"labels":[],"label_agreement":null},{"id":"W4410105423","doi":"10.3390/ijms26094398","title":"A Positive Feedback DNA-PK/MYT1L-CXCR1-ERK1/2 Proliferative Signaling Loop in Glioblastoma","year":2025,"lang":"en","type":"article","venue":"International Journal of Molecular Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge","funders":"Canadian Institutes of Health Research","keywords":"Biology; Cell cycle; Molecular biology; Transcription factor; Cell growth; Signal transduction; Cell biology; Transcription (linguistics); Cancer research; Cell; Gene; Biochemistry","score_opus":0.008240336054979092,"score_gpt":0.28362404746325237,"score_spread":0.2753837114082733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410105423","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9903784,0.0048216823,0.0023232154,0.00026351464,0.000036725334,0.000034356188,0.00041237002,0.00014397595,0.0015856988],"genre_scores_gemma":[0.9953766,0.0016752026,0.0012860488,0.00010828154,0.000011602151,0.00003566013,0.00041734078,0.000008013232,0.001081166],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990475,0.000015075209,0.0000070279743,0.000017544546,0.000025097199,0.00003037717],"domain_scores_gemma":[0.99995995,0.0000036294125,0.00001505472,0.0000025467182,0.0000059821036,0.000012879822],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010813109,0.00021289587,0.00020400755,0.00020530267,0.00016243813,0.00022720342,0.00010610055,0.00020243417,0.00080420123],"category_scores_gemma":[0.000091485446,0.000116491115,0.00023416306,0.00011407146,0.00016017273,0.00017164371,0.00016015669,0.0004204267,0.00019331637],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042564602,0.000054102173,0.0012210045,0.00015718219,0.0000071988065,0.00024891226,0.000044356584,0.0002880848,0.9920414,0.00037770235,0.00031440472,0.0048200767],"study_design_scores_gemma":[0.00010112939,0.00083884,0.037602093,0.00004162138,0.00006191587,0.0013561213,0.00016290613,0.0069062756,0.9437749,0.00057438656,0.008561326,0.000018486873],"about_ca_topic_score_codex":0.00066859275,"about_ca_topic_score_gemma":0.000968231,"teacher_disagreement_score":0.00080420123,"about_ca_system_score_codex":0.00043509394,"about_ca_system_score_gemma":0.00024859744,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W4410120376","doi":"10.1038/s41586-025-09074-z","title":"Molecular basis of SIFI activity in the integrated stress response","year":2025,"lang":"en","type":"article","venue":"Nature","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sinai Health System; Lunenfeld-Tanenbaum Research Institute","funders":"","keywords":"Stress (linguistics); Chemistry; Computational biology; Biology","score_opus":0.004903304559939165,"score_gpt":0.26730311265491186,"score_spread":0.2623998080949727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410120376","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9722902,0.0027806703,0.02106799,0.00027380913,0.000065677974,0.00002115973,0.00017229807,0.00023643587,0.0030917192],"genre_scores_gemma":[0.9960747,0.00036216053,0.0023665412,0.000046634785,0.000011867721,0.0000075899684,0.00014113773,0.0000063014268,0.0009830939],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999114,0.000009083944,0.0000046271684,0.00002586551,0.000028841254,0.000020091702],"domain_scores_gemma":[0.99982136,0.000037844406,0.000050182767,0.000026817183,0.000025414904,0.000038384103],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017010322,0.00029567,0.00016300679,0.0001370779,0.00014903005,0.00033066713,0.0003333849,0.0004365709,0.0012877973],"category_scores_gemma":[0.00013958842,0.00009537962,0.00018657092,0.000086195316,0.0003586518,0.00034802646,0.00018579407,0.00041376214,0.00055327435],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046995134,0.0000097333705,0.00039877617,0.000023578863,0.0000038962175,0.000103432154,0.000009674938,0.00021410333,0.99612147,0.0014895665,0.000039778883,0.001538848],"study_design_scores_gemma":[0.000015070995,0.00021538736,0.006532258,0.0000080676455,0.00000837212,0.00052232493,0.000025338893,0.006612949,0.9823271,0.0015566122,0.0021689953,0.000007466769],"about_ca_topic_score_codex":0.00025137392,"about_ca_topic_score_gemma":0.00018342446,"teacher_disagreement_score":0.0012877973,"about_ca_system_score_codex":0.00044635302,"about_ca_system_score_gemma":0.00013519179,"threshold_uncertainty_score":0.0043081045},"labels":[],"label_agreement":null},{"id":"W4410151794","doi":"10.1101/2025.05.04.25326946","title":"The trials of interpreting clinical trials - A Bayesian perspective Colchicine in secondary cardiovascular prevention","year":2025,"lang":"en","type":"preprint","venue":"medRxiv","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Perspective (graphical); Clinical trial; Bayesian probability; Colchicine; Medicine; Intensive care medicine; Internal medicine; Computer science; Artificial intelligence","score_opus":0.09638746082873052,"score_gpt":0.433037561788917,"score_spread":0.3366501009601865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410151794","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":"methods","domain_gemma":"methods","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":"methods","domain_consensus":"methods","prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.003994756,0.28666687,0.33158353,0.3506657,0.010310313,0.0017228693,0.0010894758,0.00031493657,0.013651528],"genre_scores_gemma":[0.25511086,0.12694122,0.48873487,0.08916417,0.027792802,0.009436986,0.0006984544,0.00032601648,0.0017946956],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.2945651,0.66361976,0.018759105,0.0070205536,0.015266629,0.00076876127],"domain_scores_gemma":[0.081959575,0.86267966,0.021485725,0.018635007,0.0139136845,0.0013262905],"candidate_categories":["metaresearch"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.566793,0.0039554317,0.012976597,0.013823393,0.0026371665,0.017259357,0.009031274,0.014891471,0.0048519718],"category_scores_gemma":[0.8111584,0.0038727208,0.005841262,0.008989935,0.02366512,0.016324854,0.0069832643,0.019411871,0.0012103815],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0032471183,0.00023756662,0.008181011,0.042677954,0.020403646,0.0006687659,0.003999461,0.035022706,0.000550506,0.5542407,0.061119344,0.2696512],"study_design_scores_gemma":[0.0012886907,0.0002759676,0.00096757547,0.020890014,0.0024699694,0.00023549178,0.00036848546,0.017255578,0.0003663414,0.9272719,0.02835831,0.00025166012],"about_ca_topic_score_codex":0.0070330296,"about_ca_topic_score_gemma":0.0043494776,"teacher_disagreement_score":0.43320698,"about_ca_system_score_codex":0.009526903,"about_ca_system_score_gemma":0.015560433,"threshold_uncertainty_score":0.5342214},"labels":[],"label_agreement":null},{"id":"W4410443310","doi":"10.1016/j.revmed.2025.03.014","title":"Des anticorps neutralisants préexistants ciblant des épitopes structurellement divers de l’interféron de type I sont à l’origine de formes sévères de COVID-19","year":2025,"lang":"fr","type":"article","venue":"La Revue de Médecine Interne","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Political science","score_opus":0.022417409012369008,"score_gpt":0.3192596236147334,"score_spread":0.29684221460236443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410443310","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99618894,0.0010692684,0.0012604186,0.00013386225,0.000070067574,0.000014109651,0.00007232809,0.000016336387,0.0011745647],"genre_scores_gemma":[0.997757,0.00026037835,0.0005326835,0.000108854394,0.000060129783,0.000008388315,0.00018423049,0.000011077024,0.0010772316],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999785,0.000040285624,0.000024035897,0.000048276677,0.000045239216,0.000057060624],"domain_scores_gemma":[0.9994475,0.00018864834,0.00011829992,0.00006353977,0.000098149874,0.000083826584],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002998744,0.0004365029,0.00031850353,0.00026314196,0.00037374947,0.000542507,0.00016790487,0.0006284024,0.0019015553],"category_scores_gemma":[0.00095686805,0.00016109295,0.000395012,0.00012639223,0.00032613342,0.0002764859,0.00018907416,0.00080901396,0.0004511192],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002086183,0.00027145288,0.060050514,0.00013322782,0.00014572388,0.011777036,0.00052749563,0.00024394081,0.8862294,0.001446264,0.0010059158,0.036082815],"study_design_scores_gemma":[0.00037295622,0.0040471987,0.3796044,0.00010848491,0.00032507538,0.15306035,0.0010511465,0.002281803,0.42132968,0.001526941,0.036218088,0.00007382177],"about_ca_topic_score_codex":0.00049656106,"about_ca_topic_score_gemma":0.00030248187,"teacher_disagreement_score":0.0019015553,"about_ca_system_score_codex":0.00025124164,"about_ca_system_score_gemma":0.0001242423,"threshold_uncertainty_score":0.0063613653},"labels":[],"label_agreement":null},{"id":"W4410542119","doi":"10.1016/j.xcrm.2025.102088","title":"Targeting STING antagonism in HSV-1: A peptide-based strategy to restore antiviral immunity and suppress viral pathogenesis","year":2025,"lang":"en","type":"article","venue":"Cell Reports Medicine","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Beijing Academy of Agricultural and Forestry Sciences","keywords":"Sting; Pathogenesis; Herpes simplex virus; Virology; Stimulator of interferon genes; Immunity; Interferon; HSL and HSV; Virus; Viral replication; Immunology; Biology; Antagonism; Medicine; Innate immune system; Immune system; Receptor","score_opus":0.011634149679937287,"score_gpt":0.26534938196746294,"score_spread":0.2537152322875256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410542119","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97485244,0.008454347,0.010047088,0.0005483762,0.0002535091,0.0002160108,0.00042283908,0.00018909776,0.005016411],"genre_scores_gemma":[0.9850338,0.004340388,0.007683205,0.00018825359,0.00007101409,0.000064737615,0.00021289026,0.000014960462,0.0023906922],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999405,0.000009036564,0.0000040721275,0.000010430025,0.000015288993,0.000020726724],"domain_scores_gemma":[0.9999653,0.0000049853556,0.00001030985,0.0000027362394,0.000003686967,0.00001305637],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014707539,0.0005221676,0.00029010748,0.00024060869,0.00014909572,0.00030445447,0.00027476178,0.0003937411,0.0012884879],"category_scores_gemma":[0.00007624616,0.00009822896,0.00017319105,0.00011421884,0.0002236071,0.00024281577,0.00017640034,0.00086496834,0.00034413757],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026016886,0.00010450031,0.00007610009,0.000056200515,0.000005130198,0.00006938209,0.0000113957,0.00023951266,0.9913481,0.0003534416,0.000108440756,0.0073676063],"study_design_scores_gemma":[0.00012774537,0.0019487083,0.0007741431,0.0000139480835,0.000026216834,0.0004789442,0.000011582063,0.0011676867,0.9903572,0.00018139767,0.004904721,0.000007681443],"about_ca_topic_score_codex":0.00014694026,"about_ca_topic_score_gemma":0.00031004896,"teacher_disagreement_score":0.0012884879,"about_ca_system_score_codex":0.00023845554,"about_ca_system_score_gemma":0.00020983788,"threshold_uncertainty_score":0.0043103695},"labels":[],"label_agreement":null},{"id":"W4410711822","doi":"10.1038/s41467-025-60133-5","title":"Palbociclib and dsRNA sensor co-operate to enhance anti-cancer effects through ER stress and modulation of immune evasion","year":2025,"lang":"en","type":"article","venue":"Nature Communications","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Oncolytics Biotech; National Cancer Institute; RIKEN; National Institute for Health and Care Research; Cancer Research UK","keywords":"Oncolytic virus; TLR3; MDA5; Interferon; Innate immune system; RNA silencing; Immune system; Biology; Cancer research; Stress granule; Signal transduction; RNA; Cell biology; RNA interference; Virology; Immunology; Messenger RNA; Gene; Biochemistry; Toll-like receptor","score_opus":0.010574252524757,"score_gpt":0.3456333621899174,"score_spread":0.3350591096651604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410711822","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9841891,0.0044151824,0.002929837,0.00032518848,0.00008177176,0.00011778682,0.0006485356,0.00021786615,0.007074712],"genre_scores_gemma":[0.99242824,0.00096166955,0.0023356494,0.00017363223,0.000026774547,0.00007981596,0.00064106256,0.000021077401,0.0033321462],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985385,0.00002501382,0.000011856012,0.000028109476,0.00003841047,0.000042787826],"domain_scores_gemma":[0.99995255,0.000007390712,0.000012933232,0.000006586852,0.0000071851764,0.000013420222],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012134109,0.00040210824,0.00043900663,0.0002505565,0.00010999765,0.0003260184,0.00022788637,0.00032236427,0.0029764757],"category_scores_gemma":[0.000073318995,0.000110668996,0.00024473935,0.00020022526,0.00014291359,0.00021284515,0.00018331746,0.0004911808,0.0006413678],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040971936,0.00011650783,0.00024089329,0.00007841684,0.000013125894,0.00006218926,0.000006101581,0.00010932765,0.99328715,0.00007408231,0.00012627197,0.0054763043],"study_design_scores_gemma":[0.00008065579,0.0011203283,0.002132221,0.000005529793,0.000025403371,0.00035213868,0.000012278856,0.00044207743,0.9921326,0.000036833637,0.0036555433,0.000004346477],"about_ca_topic_score_codex":0.0002124605,"about_ca_topic_score_gemma":0.0005152743,"teacher_disagreement_score":0.0029764757,"about_ca_system_score_codex":0.00029087352,"about_ca_system_score_gemma":0.00019363181,"threshold_uncertainty_score":0.009957314},"labels":[],"label_agreement":null},{"id":"W4410804033","doi":"10.1200/jco.2025.43.16_suppl.6020","title":"Dose expansion data from iintune-1, a phase 1/2 study of the STING agonist dazostinag plus pembrolizumab as first-line (1L), in patients with recurrent/metastatic squamous cell carcinoma of the head and neck (RM-SCCHN).","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Oncology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Medicine; Pembrolizumab; Agonist; Oncology; Internal medicine; Basal cell; Cancer; Immunotherapy; Receptor","score_opus":0.0827834370328013,"score_gpt":0.40874124727580385,"score_spread":0.3259578102430025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410804033","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.985669,0.0027449366,0.00061802735,0.00041857778,0.00007224992,0.003301086,0.0032620362,0.00009193333,0.0038220936],"genre_scores_gemma":[0.97535545,0.0026869406,0.0023399252,0.0010481208,0.00010883718,0.0030686378,0.01080091,0.0000613099,0.0045297756],"study_design_codex":"randomized_trial","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.99951196,0.00024402051,0.000027757133,0.000060903283,0.00006747438,0.000087976834],"domain_scores_gemma":[0.999131,0.00015722447,0.00021369234,0.00010262365,0.00007168844,0.00032382],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017156524,0.001110643,0.0013323437,0.00037287417,0.00049982086,0.00084709714,0.0008622323,0.0010553147,0.0036309855],"category_scores_gemma":[0.0009185913,0.00042408096,0.0013302199,0.00043631732,0.0005351614,0.0007471004,0.0003623957,0.0028031082,0.00092873204],"study_design_candidate":"nonrandomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.4012256,0.115909696,0.035286598,0.0022630251,0.0027452135,0.0009279832,0.0013541447,0.008511052,0.18304317,0.0004576191,0.01672556,0.23155035],"study_design_scores_gemma":[0.20068637,0.67474693,0.078866154,0.00018181713,0.0013967317,0.0017135392,0.00024243406,0.0017429437,0.020653086,0.00036106797,0.019330392,0.000078534664],"about_ca_topic_score_codex":0.0011028622,"about_ca_topic_score_gemma":0.0042943754,"teacher_disagreement_score":0.0036309855,"about_ca_system_score_codex":0.00088303495,"about_ca_system_score_gemma":0.0011750942,"threshold_uncertainty_score":0.01214689},"labels":[],"label_agreement":null},{"id":"W4410875382","doi":"10.1080/15476286.2025.2512610","title":"Deciphering the multifaceted role of double-stranded RNA sensor protein kinase R: pathophysiological function beyond the antiviral response","year":2025,"lang":"en","type":"review","venue":"RNA Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Kootenay Association for Science & Technology","funders":"Ministry of Science and ICT, South Korea; Korea Dementia Research Center; Ministry of Health","keywords":"Biology; Function (biology); RNA; Kinase; Cell biology; Computational biology; Genetics; Gene","score_opus":0.023191733169181,"score_gpt":0.29419824732651734,"score_spread":0.27100651415733634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410875382","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00018504866,0.997336,0.00022609498,0.00042699339,0.00035090756,0.0000025905533,0.000013171054,0.000008589585,0.001450491],"genre_scores_gemma":[0.0007743835,0.99777883,0.00018867923,0.00021168691,0.00025065595,0.0000035145495,0.000024129438,0.0000015359393,0.000766453],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99992466,0.000012241584,0.000009288497,0.000013242217,0.000031142295,0.000009390406],"domain_scores_gemma":[0.9998703,0.000052769203,0.00001689551,0.0000046224213,0.000036105583,0.000019297746],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000289288,0.00055695506,0.0006652235,0.0012771831,0.00018883184,0.0006694605,0.00049131847,0.0006864069,0.0023067445],"category_scores_gemma":[0.00036876908,0.00014087583,0.00024269403,0.0011868847,0.00033850843,0.0012098305,0.00052597345,0.0012857278,0.0014599041],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059002847,0.000043613603,0.00016295606,0.011891937,0.000056517383,0.00025990536,0.00007705534,0.00036261804,0.00542777,0.0072244178,0.036271296,0.938163],"study_design_scores_gemma":[0.0000061883534,0.000054570766,0.00069401483,0.0016196579,0.000039712133,0.0012038447,0.000050692328,0.00007856721,0.0005723477,0.0023900555,0.9932805,0.0000100230245],"about_ca_topic_score_codex":0.00037035748,"about_ca_topic_score_gemma":0.0007138355,"teacher_disagreement_score":0.0023067445,"about_ca_system_score_codex":0.00043545538,"about_ca_system_score_gemma":0.0007531734,"threshold_uncertainty_score":0.007716775},"labels":[],"label_agreement":null},{"id":"W4410919596","doi":"10.1101/2025.05.27.656302","title":"Functionally distinct ALK and ROS1 fusions detected in infant-type hemispheric gliomas converge on STAT3 and SHP2 activation","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"Swiss Bridge Foundation; Promedica Stiftung; Universität Zürich; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"ROS1; Cancer research; STAT3; Chemistry; Neuroscience; Biology; Cell biology; Genetics; Signal transduction; Cancer","score_opus":0.009458885134133854,"score_gpt":0.21716312392452952,"score_spread":0.20770423879039568,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410919596","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956053,0.00043019184,0.0017156467,0.000063644206,0.000012060151,0.000010049129,0.0009885664,0.000051839426,0.0011225978],"genre_scores_gemma":[0.9941302,0.00032233042,0.0014664648,0.0000614901,0.000006170336,0.000017870609,0.002156919,0.000023181532,0.0018152801],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988174,0.000007504928,0.0000062016684,0.000027390874,0.000036150406,0.000040975927],"domain_scores_gemma":[0.9999399,0.00000843036,0.00002001295,0.0000055317505,0.0000072474845,0.000018840272],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009261955,0.0002565249,0.00014135055,0.00029039,0.00014789571,0.0002334348,0.00010414389,0.00030232128,0.0018362673],"category_scores_gemma":[0.0000976205,0.00008488686,0.00022379843,0.0002082265,0.00018413451,0.00013039513,0.00022469235,0.00040785235,0.0005070553],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000096791715,0.000006044425,0.0020148922,0.00001972252,0.0000059173713,0.0001532944,0.000019136918,0.00002108221,0.9968545,0.000060584865,0.000054314754,0.000693653],"study_design_scores_gemma":[0.000008537621,0.00008431064,0.0893478,0.0000037462016,0.00002306532,0.0013962016,0.00012373294,0.00082249666,0.9059959,0.00011084909,0.0020782223,0.0000050772746],"about_ca_topic_score_codex":0.000484597,"about_ca_topic_score_gemma":0.00061349204,"teacher_disagreement_score":0.0018362673,"about_ca_system_score_codex":0.00020756027,"about_ca_system_score_gemma":0.000107439075,"threshold_uncertainty_score":0.0061429143},"labels":[],"label_agreement":null},{"id":"W4410938554","doi":"10.1101/2025.05.30.657104","title":"A Catalytically Inactive Protein Kinase C alpha Mutation Drives Chordoid Glioma by Pathway Rewiring","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Tiroler Wissenschaftsförderung; Sorbonne Université; Direction Générale de l’offre de Soins; National Institutes of Health; Institut National Du Cancer; University of California, San Diego; Ligue Contre le Cancer; Pharmaceutical Research and Manufacturers of America Foundation; Austrian Science Fund; Government of Ontario; Institut National de la Santé et de la Recherche Médicale","keywords":"Interactome; Protein kinase C; Immunoprecipitation; Scaffold protein; Mutant; Cell biology; Mutation; Phosphorylation; Biology; Kinase; Signal transduction; Chemistry; Biochemistry; Gene","score_opus":0.007601986620986701,"score_gpt":0.220084770402027,"score_spread":0.2124827837810403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410938554","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974849,0.00013011166,0.0010617871,0.00009423033,0.000029643936,0.000013711446,0.00040473716,0.000058675687,0.00072219875],"genre_scores_gemma":[0.9980508,0.00006373061,0.00068923476,0.000027691429,0.0000056531394,0.000006097968,0.00022778122,0.000016919927,0.0009119838],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988246,0.000017530272,0.00001394158,0.000029452747,0.000031744676,0.0000248697],"domain_scores_gemma":[0.9998186,0.00003793334,0.000051651758,0.000025290654,0.000008415296,0.000058139412],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009070832,0.00030772545,0.00014500182,0.00023666752,0.00013896887,0.000229531,0.00019508749,0.0002567899,0.0013861293],"category_scores_gemma":[0.00011911362,0.00008959258,0.00018691814,0.00014276935,0.00033834018,0.00007147624,0.00020492502,0.0005240948,0.00044352232],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006889431,0.000014240375,0.0004716309,0.000013767091,0.000005185941,0.00054312707,0.000009533767,0.00007731663,0.9979025,0.00017829785,0.00006260532,0.0006528473],"study_design_scores_gemma":[0.000027232145,0.00012395768,0.0067692827,0.000005142834,0.000012601165,0.002989834,0.000050835555,0.001777444,0.9856725,0.00014612678,0.0024199635,0.0000050878116],"about_ca_topic_score_codex":0.0008886444,"about_ca_topic_score_gemma":0.00089251396,"teacher_disagreement_score":0.0013861293,"about_ca_system_score_codex":0.00037187757,"about_ca_system_score_gemma":0.00020245965,"threshold_uncertainty_score":0.0046370625},"labels":[],"label_agreement":null},{"id":"W4411121742","doi":"10.1007/s00262-025-04088-y","title":"NLRP3 activation promotes cGAS/STING signaling and antitumor immunity by colorectal cancer cells","year":2025,"lang":"en","type":"article","venue":"Cancer Immunology Immunotherapy","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Alexandra Hospital; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; University Hospital Foundation; University of Alberta","keywords":"Sting; Cancer research; Immunity; Colorectal cancer; Signal transduction; Medicine; Immunology; Cancer; Biology; Immune system; Internal medicine; Cell biology","score_opus":0.009776076470840942,"score_gpt":0.2748164852944155,"score_spread":0.26504040882357455,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411121742","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928197,0.0022548216,0.0024595752,0.00015245205,0.00004747853,0.00007219851,0.0004912686,0.00017775972,0.0015247199],"genre_scores_gemma":[0.9967193,0.00050727464,0.0014427336,0.000060432856,0.000014287768,0.00006059086,0.00043088433,0.000009933006,0.00075457373],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978656,0.00004379255,0.000023603274,0.00003786959,0.000049912738,0.00005822677],"domain_scores_gemma":[0.9998901,0.000021209082,0.00003130702,0.00001791767,0.0000109851135,0.00002848637],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020600407,0.00040741873,0.00035115276,0.00023212643,0.00015207825,0.0003487869,0.00012421256,0.00028537505,0.0017919306],"category_scores_gemma":[0.00013227374,0.00010494811,0.00046289735,0.00023247638,0.0002618461,0.00021766394,0.0002518782,0.00086812075,0.00055692776],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042344126,0.00006552938,0.00028608058,0.0000800595,0.000005971262,0.000060618408,0.00002836114,0.00008284558,0.9972904,0.00004689502,0.000085586646,0.0015442164],"study_design_scores_gemma":[0.00007325262,0.0011493143,0.009402051,0.000016534412,0.000022504777,0.00041547394,0.000050911705,0.0016018933,0.98414755,0.00007667457,0.0030362261,0.000007643361],"about_ca_topic_score_codex":0.00034400175,"about_ca_topic_score_gemma":0.00048141883,"teacher_disagreement_score":0.0017919306,"about_ca_system_score_codex":0.00031868485,"about_ca_system_score_gemma":0.00024935658,"threshold_uncertainty_score":0.0059945583},"labels":[],"label_agreement":null},{"id":"W4411150162","doi":"10.1016/j.cub.2025.05.039","title":"Dynamic control of Argonautes by a rapidly evolving immunological switch","year":2025,"lang":"en","type":"article","venue":"Current Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institute on Aging; National Science Foundation; Imperial College London; Azrieli Foundation; Hebrew University of Jerusalem; Milner Foundation; National Institute of General Medical Sciences; Schmidt Family Foundation; European Molecular Biology Organization; European Research Council; National Institutes of Health","keywords":"Biology; Computational biology; Control (management); Evolutionary biology; Artificial intelligence; Computer science","score_opus":0.007378042825911622,"score_gpt":0.2803090627252952,"score_spread":0.27293101989938356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411150162","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9822902,0.0017916404,0.01152796,0.00015583709,0.00004882819,0.000013949543,0.00014110241,0.00035796873,0.0036725597],"genre_scores_gemma":[0.9948026,0.00033462318,0.0031803711,0.00005217915,0.000016234562,0.000020226602,0.00010862972,0.00003155702,0.0014536879],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998288,0.000024474715,0.000008614792,0.00006328178,0.000045986042,0.000028755025],"domain_scores_gemma":[0.9998994,0.00001636034,0.000028877426,0.000013923931,0.0000138387295,0.00002769812],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001973737,0.00021814721,0.00016478961,0.00016410422,0.0001995207,0.00034012264,0.00026279723,0.00016040765,0.0007147824],"category_scores_gemma":[0.00015393492,0.00010030169,0.00016486348,0.00006390588,0.00026131238,0.00025412053,0.00040186103,0.00030904202,0.00022847575],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003888987,0.000005071999,0.0002747982,0.000010339341,0.0000030495808,0.000036629695,0.000012976951,0.000056215504,0.99690527,0.0006015866,0.000052112806,0.0020029866],"study_design_scores_gemma":[0.000031565844,0.00020304111,0.016734153,0.000008599733,0.000021211856,0.0006851527,0.00006613958,0.007533903,0.9617364,0.0013582297,0.01159822,0.000023461791],"about_ca_topic_score_codex":0.00015117305,"about_ca_topic_score_gemma":0.0002437803,"teacher_disagreement_score":0.0007147824,"about_ca_system_score_codex":0.00027700965,"about_ca_system_score_gemma":0.00011265045,"threshold_uncertainty_score":0.0023911595},"labels":[],"label_agreement":null},{"id":"W4411178922","doi":"10.1038/s44318-025-00485-2","title":"Transcription factor IRF-5 regulates lipid metabolism and mitochondrial function in murine CD8+ T-cells during viral infection","year":2025,"lang":"en","type":"article","venue":"The EMBO Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill Genome Centre; Institut National de la Recherche Scientifique","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Fonds de recherche du Québec; Armand-Frappier Foundation","keywords":"Biology; Transcription factor; Transcription (linguistics); Cell biology; Function (biology); Lipid metabolism; CD8; Mitochondrion; Molecular biology; Virology; Biochemistry; Genetics; Gene; Immune system","score_opus":0.007295938118767741,"score_gpt":0.22247874226087128,"score_spread":0.21518280414210353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411178922","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99820435,0.0005417875,0.00081383024,0.000027975882,0.0000050208437,0.0000050559493,0.00014879115,0.000022709271,0.00023053642],"genre_scores_gemma":[0.9986242,0.00014961143,0.0005554163,0.000015500887,0.0000027677588,0.000009683698,0.00022952158,0.0000059094077,0.00040736067],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989057,0.000022565466,0.000012293367,0.000018192623,0.000018762245,0.00003772458],"domain_scores_gemma":[0.9998766,0.000017585611,0.000050281356,0.000013278329,0.000012405669,0.000029847137],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013306401,0.00023598276,0.0001564459,0.00017530072,0.00010864166,0.00022558942,0.00015048402,0.00026136843,0.0006626977],"category_scores_gemma":[0.00010981204,0.00011214371,0.00014221133,0.00010025961,0.00018254633,0.0001597312,0.00018415276,0.00038363924,0.00028914708],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000115871,0.000010201059,0.00040906592,0.000009715268,0.0000011552123,0.00002007125,0.000007562803,0.000025510324,0.9990803,0.000017995717,0.0000058778296,0.00029659638],"study_design_scores_gemma":[0.000022691673,0.00035012723,0.017406037,0.000011323758,0.000014905909,0.0002452003,0.00006376066,0.0010086035,0.98019594,0.000087226406,0.0005892718,0.0000049389137],"about_ca_topic_score_codex":0.00018524606,"about_ca_topic_score_gemma":0.00020274478,"teacher_disagreement_score":0.0006626977,"about_ca_system_score_codex":0.00020899346,"about_ca_system_score_gemma":0.000093156414,"threshold_uncertainty_score":0.0022168756},"labels":[],"label_agreement":null},{"id":"W4411214366","doi":"10.3390/biomedicines13061435","title":"Clinical Utility of IFIT Proteins in Human Malignancies","year":2025,"lang":"en","type":"review","venue":"Biomedicines","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St Joseph's Health Care; London Health Sciences Centre; Western University","funders":"Academic Medical Organization of Southwestern Ontario; Canadian Institutes of Health Research; Cancer Research Society","keywords":"Computational biology; Cancer research; Medicine; Biology","score_opus":0.07736341218552852,"score_gpt":0.41022178585563757,"score_spread":0.33285837367010906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411214366","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001652144,0.9982522,0.00011012318,0.00027005188,0.0001780388,0.0000043998803,0.00001675255,0.0000049366254,0.0009981821],"genre_scores_gemma":[0.0014878921,0.9969921,0.0002076234,0.00033940392,0.00023668092,0.000008515041,0.00005130337,0.0000015693605,0.00067489356],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99981517,0.00004180998,0.000030075193,0.000030950883,0.00006712926,0.000015016094],"domain_scores_gemma":[0.99972504,0.00015067276,0.00003285838,0.000007251547,0.00006598741,0.000018112132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058879174,0.00047261623,0.00085631304,0.0012798334,0.00018551314,0.0005856524,0.0004700085,0.00081319804,0.0025003168],"category_scores_gemma":[0.0007660081,0.00016207069,0.00041456227,0.0008470979,0.00029482806,0.0006839142,0.00049182854,0.0012913395,0.0012626355],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006277875,0.000025939962,0.00024296579,0.0069085844,0.00005402518,0.00016785011,0.000036355977,0.00017310774,0.0015864223,0.0019471244,0.016934883,0.97186005],"study_design_scores_gemma":[0.00002102717,0.00012157928,0.0011863064,0.0030936631,0.00008946947,0.00168699,0.000040362367,0.000084468484,0.0008635149,0.0014128457,0.9913858,0.000013827223],"about_ca_topic_score_codex":0.0004637305,"about_ca_topic_score_gemma":0.00096259994,"teacher_disagreement_score":0.0025003168,"about_ca_system_score_codex":0.00042788772,"about_ca_system_score_gemma":0.0006161163,"threshold_uncertainty_score":0.008364439},"labels":[],"label_agreement":null},{"id":"W4411270585","doi":"10.1038/s42004-025-01574-3","title":"Crystallographic fragment screening reveals ligand hotspots in TRIM21 PRY-SPRY domain","year":2025,"lang":"en","type":"article","venue":"Communications Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Discovery Centre; Structural Genomics Consortium","funders":"Ontario Genomics Institute; European Federation of Pharmaceutical Industries and Associations; Ontario Genomics; Genome Canada; Diamond Light Source; McGill University; Genentech; Bayer; Pfizer; Deutsche Forschungsgemeinschaft; Bristol-Myers Squibb","keywords":"Fragment (logic); Domain (mathematical analysis); Crystallography; Chemistry; Computer science; Mathematics; Algorithm","score_opus":0.015235891089969842,"score_gpt":0.2795384639244789,"score_spread":0.26430257283450903,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411270585","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99514115,0.0008034272,0.0024742803,0.0001226539,0.000007213357,0.000029669596,0.00040738293,0.00007990015,0.0009342767],"genre_scores_gemma":[0.9942524,0.00039774334,0.0028701471,0.000099674144,0.0000038456087,0.000023493627,0.0010725881,0.000019379979,0.0012608593],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998203,0.000034063392,0.000008607532,0.000026051786,0.000066533685,0.000044521366],"domain_scores_gemma":[0.9999143,0.000025279447,0.000015161905,0.00000817592,0.000019098059,0.000018081591],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020372492,0.0002485427,0.0003694744,0.00018512616,0.0001496592,0.00013148626,0.00027032604,0.00026368367,0.0015734094],"category_scores_gemma":[0.00019772271,0.000095958276,0.00020024512,0.00020308587,0.0001279927,0.00011840584,0.00018531691,0.00033833116,0.0003112968],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037995787,0.00009490082,0.001015269,0.00005255586,0.000017792147,0.00020973542,0.000030592273,0.0011041577,0.99282277,0.00006419308,0.00028898419,0.0039191456],"study_design_scores_gemma":[0.000058111884,0.00082373346,0.006332831,0.0000056879926,0.000027662027,0.00048857916,0.000060614726,0.0040053576,0.98672897,0.00003643363,0.0014234853,0.000008558344],"about_ca_topic_score_codex":0.0013122495,"about_ca_topic_score_gemma":0.0018689167,"teacher_disagreement_score":0.0015734094,"about_ca_system_score_codex":0.00028552554,"about_ca_system_score_gemma":0.00018843183,"threshold_uncertainty_score":0.005263567},"labels":[],"label_agreement":null},{"id":"W4411273819","doi":"10.1016/j.jbc.2025.109641","title":"Abstract 2149 Biochemical and biophysical characterization of Eag protein chaperones in complex with effector transmembrane domains","year":2025,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Canadian Institutes of Health Research; Research Manitoba","keywords":"Effector; Transmembrane protein; Cell biology; Chemistry; Transmembrane domain; Computational biology; Biology; Biochemistry; Biophysics; Membrane","score_opus":0.010565449971823028,"score_gpt":0.23363730943167046,"score_spread":0.22307185945984745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411273819","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99571687,0.0011148185,0.00091461936,0.00029400128,0.000075977456,0.000015577454,0.00054333167,0.00003346818,0.0012913271],"genre_scores_gemma":[0.99196285,0.00035195606,0.00083535654,0.00023941699,0.000026580128,0.000014186211,0.0028592143,0.000023237211,0.0036872565],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981695,0.000028106053,0.000011954873,0.000030817366,0.000049360737,0.00006291331],"domain_scores_gemma":[0.9998367,0.000014721396,0.000027060114,0.000012001808,0.00004683865,0.00006264453],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017046758,0.00034744185,0.00025526987,0.0002614614,0.00028989985,0.00034582554,0.00022015627,0.00029573624,0.0014068579],"category_scores_gemma":[0.00035074123,0.000117443626,0.0002812001,0.00036343915,0.0001916989,0.00014101669,0.00017321647,0.00051791774,0.0006166297],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027894985,0.00013375113,0.001976609,0.00003655489,0.00003398823,0.00023972061,0.000059871712,0.00010917834,0.9953135,0.00013884236,0.0005055546,0.0011734236],"study_design_scores_gemma":[0.000083469924,0.0006121248,0.085438125,0.000050510458,0.00007531544,0.001501411,0.00041594126,0.0067014797,0.8893756,0.00031443953,0.015391642,0.00004004358],"about_ca_topic_score_codex":0.0014920485,"about_ca_topic_score_gemma":0.0009598269,"teacher_disagreement_score":0.0014920485,"about_ca_system_score_codex":0.0003552115,"about_ca_system_score_gemma":0.00018575987,"threshold_uncertainty_score":0.0047063828},"labels":[],"label_agreement":null},{"id":"W4411310089","doi":"10.1007/978-1-0716-4615-1_4","title":"Analysis of the Virus–Host Protein–Protein Interaction via Co-Immunoprecipitation (Co-IP)","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Immunoprecipitation; Host (biology); Chemistry; Cell biology; Virology; Biology; Gene; Biochemistry; Genetics","score_opus":0.016256364432661284,"score_gpt":0.39686028980773436,"score_spread":0.3806039253750731,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310089","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5451011,0.010278599,0.40932155,0.0026578088,0.0018312045,0.0012030974,0.00994549,0.0028909303,0.016770225],"genre_scores_gemma":[0.74537104,0.0049692173,0.20833126,0.0009641898,0.0003234833,0.001921325,0.02100579,0.0012960235,0.015817681],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980488,0.00032534153,0.00017500653,0.00061467703,0.00043261936,0.0004035626],"domain_scores_gemma":[0.9990239,0.00032590827,0.00009878576,0.00022627536,0.00023009615,0.000095109746],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010910498,0.0022895061,0.0016318231,0.0013503798,0.0015044693,0.0015652821,0.0016786235,0.0010369839,0.003936067],"category_scores_gemma":[0.0008971752,0.00070993387,0.0019469962,0.001969878,0.0007398366,0.0010589865,0.001561764,0.005590532,0.004258008],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002476371,0.00015854323,0.00028592892,0.0002097254,0.00008299599,0.00008744048,0.000031935764,0.0001115708,0.99555993,0.00058150064,0.0004264021,0.0022163568],"study_design_scores_gemma":[0.000026340473,0.00010589074,0.0033612025,0.000012005453,0.00007795624,0.00028295835,0.00003584918,0.0053946106,0.98568314,0.00019629399,0.0048056794,0.000018174587],"about_ca_topic_score_codex":0.0014772691,"about_ca_topic_score_gemma":0.0017985641,"teacher_disagreement_score":0.003936067,"about_ca_system_score_codex":0.001087977,"about_ca_system_score_gemma":0.0006432088,"threshold_uncertainty_score":0.0131675005},"labels":[],"label_agreement":null},{"id":"W4411310138","doi":"10.1007/978-1-0716-4615-1_29","title":"Dual-Luciferase Reporter Assay to Investigate Virus–Host Interactions","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Luciferase; Dual (grammatical number); Host (biology); Virology; Chemistry; Biology; Biochemistry; Art; Genetics; Transfection; Gene","score_opus":0.023557178458909304,"score_gpt":0.40862550873752174,"score_spread":0.3850683302786124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310138","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.25220323,0.0048811925,0.71664983,0.000654053,0.0010069606,0.0016726521,0.007766309,0.004069843,0.011095925],"genre_scores_gemma":[0.39809448,0.0040020053,0.52205306,0.0006404576,0.00024821577,0.0064719464,0.022857694,0.0009936303,0.044638485],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99649245,0.0010203073,0.00025898707,0.0007361417,0.0009427372,0.0005493926],"domain_scores_gemma":[0.9990914,0.0003571474,0.00009467959,0.00016722648,0.0001730709,0.00011652232],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030481014,0.0042357384,0.0031471413,0.0025468608,0.0011309125,0.0019147871,0.0025588716,0.0017532394,0.006894396],"category_scores_gemma":[0.00076924125,0.0014342668,0.0023809548,0.0018641159,0.0012436718,0.0011341523,0.0014328387,0.006736223,0.0044137933],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002321754,0.00024537955,0.00018567462,0.00023181144,0.00004616943,0.000032262207,0.000052075593,0.00024113727,0.99465644,0.0010442495,0.00044339523,0.0025891962],"study_design_scores_gemma":[0.000052346517,0.00019736425,0.00054141483,0.0000163335,0.00003289724,0.00009955712,0.000024075713,0.0039212387,0.99050003,0.00021183526,0.0043777553,0.000025119703],"about_ca_topic_score_codex":0.0010797159,"about_ca_topic_score_gemma":0.0015707944,"teacher_disagreement_score":0.006894396,"about_ca_system_score_codex":0.0022213229,"about_ca_system_score_gemma":0.0012223963,"threshold_uncertainty_score":0.023064077},"labels":[],"label_agreement":null},{"id":"W4411377462","doi":"10.3389/fimmu.2025.1639948","title":"Editorial: Viral impact on CNS: mechanisms of immune dysfunction and cognitive decline","year":2025,"lang":"en","type":"editorial","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Cognitive decline; Neuroscience; Immune Dysfunction; Immune system; Immunology; Medicine; Cognition; Psychology; Dementia; Disease; Internal medicine","score_opus":0.0037850520100419748,"score_gpt":0.24863656616846147,"score_spread":0.2448515141584195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411377462","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000102900274,0.007028025,0.00010425809,0.02058535,0.97034687,0.000032576772,0.000066162866,0.000067844296,0.0016659396],"genre_scores_gemma":[0.00049424876,0.004904072,0.0000583893,0.011641162,0.9767596,0.000015032325,0.000031639956,0.000021617792,0.006074183],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99798477,0.00033709328,0.00022658928,0.00032001483,0.00094188185,0.00018964446],"domain_scores_gemma":[0.99337125,0.0021949848,0.0005040738,0.00015844501,0.0022509356,0.0015203215],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003745047,0.004140158,0.0025819195,0.0024997056,0.0022033607,0.0043337895,0.0030962552,0.0090980185,0.015571136],"category_scores_gemma":[0.008263407,0.00083017163,0.0021003664,0.0009473672,0.0015555841,0.0038897567,0.0013121845,0.010495943,0.0104028545],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010394501,0.000025007637,0.00005360191,0.0003585834,0.000020307421,0.00025174624,0.000013369917,0.00003476021,0.00013204724,0.00020285309,0.9916224,0.007181407],"study_design_scores_gemma":[0.00012715637,0.000106454296,0.0005359895,0.0005622481,0.00008442102,0.0006961295,0.000051008792,0.00020164365,0.00024616034,0.000936562,0.9964263,0.000025927126],"about_ca_topic_score_codex":0.0007906111,"about_ca_topic_score_gemma":0.00202577,"teacher_disagreement_score":0.015571136,"about_ca_system_score_codex":0.0022481177,"about_ca_system_score_gemma":0.0019274426,"threshold_uncertainty_score":0.052090704},"labels":[],"label_agreement":null},{"id":"W4411555965","doi":"10.1016/j.immuni.2025.05.023","title":"The R136S mutation in the APOE3 gene confers resilience against tau pathology via inhibition of the cGAS-STING-IFN pathway","year":2025,"lang":"en","type":"article","venue":"Immunity","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Freedom Together Foundation; National Institute on Aging; National Cancer Institute; Rainwater Charitable Foundation; National Institutes of Health; Cure Alzheimer's Fund; JPB Foundation; Howard Hughes Medical Institute","keywords":"Biology; Sting; Mutation; Gene; Genetics; Immunology","score_opus":0.009281133740260046,"score_gpt":0.24582285324001577,"score_spread":0.23654171949975572,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411555965","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967129,0.0001607189,0.0014782156,0.00021600338,0.00008084468,0.000019234312,0.00027170207,0.000086545704,0.0009738547],"genre_scores_gemma":[0.99786144,0.00007978323,0.00065284315,0.00008013453,0.00001609298,0.00001030721,0.0001390407,0.00003207701,0.0011282787],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998248,0.00003881922,0.000024802728,0.00003241049,0.000037692327,0.000041500247],"domain_scores_gemma":[0.99973816,0.00004753415,0.000090871916,0.000036651414,0.000014461883,0.00007245141],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021040987,0.0006140042,0.0003028859,0.0002822902,0.00019533133,0.000260527,0.0002739611,0.0005622491,0.00275178],"category_scores_gemma":[0.00024441848,0.00017180713,0.0006825631,0.00012986404,0.0005830275,0.00014982412,0.00029461397,0.00084715965,0.0005271751],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006972479,0.00007003881,0.0007275422,0.000015627458,0.000026217533,0.00061617646,0.0000182584,0.000121820645,0.9960555,0.00028180375,0.00007093845,0.0012988464],"study_design_scores_gemma":[0.00028189016,0.0015056137,0.025071157,0.000027219769,0.000117712545,0.005911662,0.00010692204,0.003149753,0.9585126,0.00074215204,0.0045229085,0.000050458202],"about_ca_topic_score_codex":0.00079506857,"about_ca_topic_score_gemma":0.0009863015,"teacher_disagreement_score":0.00275178,"about_ca_system_score_codex":0.00027089802,"about_ca_system_score_gemma":0.0003212521,"threshold_uncertainty_score":0.00920558},"labels":[],"label_agreement":null},{"id":"W4411580372","doi":"10.1101/2025.06.18.660279","title":"<i>Cis</i> -aconitate therapy protects against influenza mortality by dual targeting of viral polymerase and ERK/AKT/NF-κB signaling","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Universiteit Leiden; Leids Universitair Medisch Centrum; Institut National de la Santé et de la Recherche Médicale; Agence Nationale de la Recherche","keywords":"Protein kinase B; MAPK/ERK pathway; NF-κB; PI3K/AKT/mTOR pathway; Dual (grammatical number); Signal transduction; Virology; Cancer research; Chemistry; Medicine; Biology; Cell biology; Philosophy","score_opus":0.013800282584292218,"score_gpt":0.24112271863106766,"score_spread":0.22732243604677543,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411580372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93590415,0.014771508,0.015430544,0.0022665837,0.0011642682,0.00021917415,0.0029956724,0.00094875623,0.026299467],"genre_scores_gemma":[0.98035127,0.0032426307,0.0036675623,0.000361307,0.00013591084,0.00007193486,0.0014929265,0.00007977103,0.010596696],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999429,0.0000091681295,0.000003851093,0.000011209591,0.00001950107,0.000013341408],"domain_scores_gemma":[0.99997425,0.0000027174256,0.000007960253,0.0000036925173,0.0000040611108,0.0000073129913],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010215704,0.0002694571,0.00022716312,0.00013124663,0.000092340524,0.00023625878,0.00016664102,0.00025761116,0.0041403747],"category_scores_gemma":[0.00006523369,0.00006881109,0.00018720797,0.00008817746,0.00020675674,0.00015327844,0.00011533134,0.00054782664,0.0010058834],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000999593,0.00006657299,0.00012341059,0.000083222745,0.000015813754,0.00003709931,0.0000054340185,0.000119503966,0.9911349,0.00024852098,0.00096513197,0.006200778],"study_design_scores_gemma":[0.00011135129,0.00066104543,0.0015339758,0.000011612646,0.00001834529,0.0002687678,0.000011191634,0.0006858977,0.9841781,0.0001689776,0.012346088,0.000004655313],"about_ca_topic_score_codex":0.00032974128,"about_ca_topic_score_gemma":0.0004644299,"teacher_disagreement_score":0.0041403747,"about_ca_system_score_codex":0.00020446615,"about_ca_system_score_gemma":0.00020272857,"threshold_uncertainty_score":0.013850927},"labels":[],"label_agreement":null},{"id":"W4412040802","doi":"10.1002/mdc3.70204","title":"Deep Brain Stimulation in a Child with Aicardi‐Goutières Syndrome‐7 ( <scp>AGS7</scp> ): A Case Report and Literature Review","year":2025,"lang":"en","type":"letter","venue":"Movement Disorders Clinical Practice","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Brain Institute; Toronto Western Hospital; Children's Hospital of Eastern Ontario; SickKids Foundation; University of Toronto; Children's Hospital of Western Ontario; London Health Sciences Centre; Hospital for Sick Children","funders":"","keywords":"Deep brain stimulation; Neuroscience; Stimulation; Psychology; Medicine; Parkinson's disease; Internal medicine","score_opus":0.011544072044181187,"score_gpt":0.3217736003296284,"score_spread":0.3102295282854472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412040802","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.30155787,0.662628,0.005621746,0.0060047493,0.0015992726,0.00039961687,0.0011701862,0.00033431491,0.020684222],"genre_scores_gemma":[0.681868,0.30152422,0.0048615737,0.0033619658,0.0033565066,0.00011967519,0.0010009946,0.0001053441,0.0038016848],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9995441,0.000045722405,0.00012396085,0.000118634496,0.0000867093,0.0000808767],"domain_scores_gemma":[0.9993494,0.00021668918,0.0002412711,0.000029608227,0.000050238647,0.00011272369],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023779846,0.001505714,0.0014956674,0.0035219137,0.0011062077,0.00151719,0.0013167044,0.0031889933,0.0029745293],"category_scores_gemma":[0.00095247664,0.0007339763,0.0007268996,0.003342127,0.0013225267,0.001975791,0.0010757928,0.0018136341,0.0010329965],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013883374,0.00002518564,0.0025379774,0.0005360042,0.000024050443,0.9876437,0.00017103775,0.00006393702,0.0007767114,0.00016878558,0.0011791979,0.006859519],"study_design_scores_gemma":[0.0000036436045,0.000011033909,0.0014280193,0.0001557831,0.000031865955,0.9952773,0.000117381955,0.000040664305,0.00015765369,0.00009673622,0.00266951,0.000010516487],"about_ca_topic_score_codex":0.0020386726,"about_ca_topic_score_gemma":0.0028983678,"teacher_disagreement_score":0.0035219137,"about_ca_system_score_codex":0.00080510485,"about_ca_system_score_gemma":0.0008426339,"threshold_uncertainty_score":0.009950817},"labels":[],"label_agreement":null},{"id":"W4412066920","doi":"10.1021/acs.molpharmaceut.5c00226","title":"Carriers Multimerize STING Protein Fragments to Activate Type I Interferon Signaling in STING-Deficient Cancer Cells","year":2025,"lang":"en","type":"article","venue":"Molecular Pharmaceutics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; Ludwig Center for Molecular Oncology; Dana-Farber/Harvard Cancer Center; Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology; Natural Sciences and Engineering Research Council of Canada; Wellcome Trust","keywords":"Sting; Interferon; Cancer research; Signal transduction; Chemistry; Biology; Immunology; Cell biology","score_opus":0.021931225801837664,"score_gpt":0.3395923534283108,"score_spread":0.31766112762647314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412066920","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9868702,0.00065352186,0.010690155,0.00010346551,0.000039097013,0.000057667465,0.00020820514,0.00011953297,0.0012582408],"genre_scores_gemma":[0.9928918,0.0004178464,0.004021194,0.000021827018,0.000006965657,0.00003319857,0.0002842834,0.000019628727,0.002303184],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999349,0.000010078056,0.0000071830495,0.000014854795,0.00001732612,0.000015687157],"domain_scores_gemma":[0.9999579,0.0000070581177,0.000014211945,0.000007900903,0.0000050510694,0.0000079339825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010988799,0.00023766702,0.00018577545,0.00010669723,0.000102989026,0.0002673115,0.00014770389,0.00024476572,0.0009508845],"category_scores_gemma":[0.00007216434,0.00008028743,0.00018014872,0.00013755294,0.0001357875,0.00023777579,0.00014605004,0.00045545545,0.00032167538],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036174624,0.00001472973,0.00004043441,0.000017720877,0.0000020885025,0.000017689823,0.000011551567,0.0001165805,0.9987212,0.00020750162,0.000034747845,0.0007794833],"study_design_scores_gemma":[0.00000968968,0.00014498725,0.00028145435,0.0000021896617,0.000005875905,0.00006160994,0.000008400792,0.0013072607,0.996561,0.000026961121,0.001588624,0.0000019946797],"about_ca_topic_score_codex":0.00059047964,"about_ca_topic_score_gemma":0.00048618423,"teacher_disagreement_score":0.0009508845,"about_ca_system_score_codex":0.0003519959,"about_ca_system_score_gemma":0.00017991939,"threshold_uncertainty_score":0.0031809807},"labels":[],"label_agreement":null},{"id":"W4412127345","doi":"10.1093/jimmun/vkaf131","title":"STING agonists drive recruitment and intrinsic type I interferon responses in monocytic lineage cells for optimal anti-tumor immunity","year":2025,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto","funders":"Canadian Institutes of Health Research; National Institutes of Health; University of Toronto; Canadian Cancer Society","keywords":"Sting; Lineage (genetic); Interferon; Immunity; Stimulator of interferon genes; Biology; Interferon type I; Immunology; Cancer research; Immune system; Innate immune system; Gene; Genetics; Physics","score_opus":0.0352673264802706,"score_gpt":0.30945181621823475,"score_spread":0.27418448973796417,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412127345","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99596316,0.00094070565,0.0013177309,0.00005919999,0.000017968729,0.000028032104,0.0006385796,0.000049792186,0.0009849737],"genre_scores_gemma":[0.9946143,0.00053950003,0.0018071979,0.000050554114,0.000010162328,0.000034645574,0.00060470053,0.000014079102,0.002324907],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998217,0.000020466807,0.000015900787,0.000034194934,0.000044296376,0.000063431966],"domain_scores_gemma":[0.99991226,0.000006341487,0.000022706361,0.000009934254,0.000008832356,0.00003995963],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000098076205,0.00025480933,0.0002084458,0.00013923773,0.0001327096,0.00029509494,0.000077923105,0.00019252703,0.001412127],"category_scores_gemma":[0.00005483162,0.00012689969,0.00019496551,0.00009030174,0.00014226137,0.00013166253,0.00015722158,0.00072314165,0.00062687224],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059221853,0.0000076021806,0.00012983778,0.000009012639,6.811935e-7,0.000014926936,0.000006365983,0.000015233585,0.99942386,0.00003586117,0.00001646234,0.00028103188],"study_design_scores_gemma":[0.000019865007,0.00033487374,0.0073383884,0.0000071787003,0.000008384398,0.00017489567,0.0000395605,0.00075584167,0.98880285,0.00004055852,0.002474258,0.0000033277825],"about_ca_topic_score_codex":0.00034191675,"about_ca_topic_score_gemma":0.0009261598,"teacher_disagreement_score":0.001412127,"about_ca_system_score_codex":0.00025808095,"about_ca_system_score_gemma":0.00020424637,"threshold_uncertainty_score":0.0047240257},"labels":[],"label_agreement":null},{"id":"W4412519030","doi":"10.1016/j.oooo.2025.04.093","title":"Exploring the role of the immune microenvironment in oral carcinogenesis: revisiting the TNFR1 signaling pathways","year":2025,"lang":"en","type":"article","venue":"Oral Surgery Oral Medicine Oral Pathology and Oral Radiology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Medicine; Carcinogenesis; Immune system; Signal transduction; Tumor microenvironment; Immunology; Cancer research; Cell biology; Cancer; Internal medicine; Biology","score_opus":0.03789325461285852,"score_gpt":0.2433088442342243,"score_spread":0.20541558962136577,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412519030","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.428347,0.5319953,0.010805327,0.018048208,0.0009363517,0.00006988211,0.0002469916,0.000101416204,0.0094495425],"genre_scores_gemma":[0.7688993,0.21478182,0.0070986226,0.0026403274,0.0010052202,0.000047192076,0.00016664037,0.000021728974,0.005339074],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9996474,0.00009084313,0.000024066007,0.000049732615,0.000094160874,0.00009380612],"domain_scores_gemma":[0.9996768,0.000060643917,0.000116876494,0.000032009655,0.00006531134,0.000048361213],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011080528,0.000492154,0.0005019966,0.0006166444,0.00031578413,0.0015442042,0.00046521638,0.00069209177,0.0012904875],"category_scores_gemma":[0.00039960336,0.00016345894,0.0005587946,0.0003864963,0.0009422676,0.0016569211,0.00075334636,0.001644755,0.00033361607],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013109439,0.00039581768,0.020744368,0.0030336415,0.00018093514,0.0017469975,0.00080987957,0.0012086566,0.6551264,0.01620219,0.0042864736,0.29495364],"study_design_scores_gemma":[0.00028727727,0.003578863,0.13233483,0.003471235,0.00084322784,0.010303387,0.008613084,0.010793983,0.43927237,0.034308746,0.3560167,0.00017628781],"about_ca_topic_score_codex":0.0005694062,"about_ca_topic_score_gemma":0.0013043017,"teacher_disagreement_score":0.0015442042,"about_ca_system_score_codex":0.0007249791,"about_ca_system_score_gemma":0.00086018397,"threshold_uncertainty_score":0.005859971},"labels":[],"label_agreement":null},{"id":"W4412570455","doi":"10.1038/s41467-025-61558-8","title":"Aberrant EZHIP expression drives tumorigenesis in osteosarcoma","year":2025,"lang":"en","type":"article","venue":"Nature Communications","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill Genome Centre; University of Toronto; Mount Sinai Hospital; Centre Hospitalier Universitaire Sainte-Justine; Jewish General Hospital; McGill University; Université de Montréal; McGill University Health Centre","funders":"National Cancer Institute; Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Fondation Charles-Bruneau; Canadian Cancer Society Research Institute; Terry Fox Foundation; National Institutes of Health; Government of Canada; Government of Ontario; McGill University; Génome Québec; Fondation du cancer des Cèdres; Genome Canada; Cancer Research Society; Canadian Institutes of Health Research; Compute Canada","keywords":"Carcinogenesis; Osteosarcoma; Cancer research; Biology; Expression (computer science); Cell biology; Computational biology; Genetics; Cancer; Computer science","score_opus":0.01269533648058989,"score_gpt":0.30231408604048127,"score_spread":0.28961874955989136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412570455","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990269,0.00021026217,0.00040533324,0.000017099335,0.0000018955175,0.0000025290478,0.000047452613,0.000010138008,0.00027849502],"genre_scores_gemma":[0.99934334,0.00013686315,0.0001808883,0.000009166513,0.0000018138371,0.0000015059109,0.00006783797,0.0000020317595,0.00025660178],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992037,0.0000092799555,0.000008081549,0.00001808567,0.000025054616,0.000019089126],"domain_scores_gemma":[0.9999132,0.000014583424,0.000038312803,0.000009826394,0.000007940251,0.00001606804],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010983372,0.00010629155,0.000123432,0.00018509792,0.00011286699,0.0002167254,0.00005743857,0.000118550684,0.00071335945],"category_scores_gemma":[0.00017580658,0.000086360276,0.00008388965,0.00016257403,0.00016436873,0.00009658446,0.00020168742,0.00015641697,0.00014930329],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032642108,0.000019921083,0.054545313,0.00003653385,0.000016653546,0.00043233376,0.00006563944,0.0001754498,0.9380814,0.00023297426,0.000066256594,0.0060010892],"study_design_scores_gemma":[0.000023825673,0.0006069804,0.5695351,0.000012756734,0.00007171363,0.005962326,0.00037645773,0.0020153658,0.41654852,0.0004351256,0.004402014,0.000009824773],"about_ca_topic_score_codex":0.0002812937,"about_ca_topic_score_gemma":0.0007488642,"teacher_disagreement_score":0.00071335945,"about_ca_system_score_codex":0.00013300616,"about_ca_system_score_gemma":0.00012040805,"threshold_uncertainty_score":0.0023863912},"labels":[],"label_agreement":null},{"id":"W4412578767","doi":"10.1080/2162402x.2025.2534912","title":"The human STING agonist E7766 induces immunogenic tumor clearance, independent of tumor-intrinsic STING expression in the <i> KRAS <sup>G12D/+</sup> Trp53 <sup>−/−</sup> </i> murine model of sarcoma","year":2025,"lang":"en","type":"article","venue":"OncoImmunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; Alberta Bone and Joint Health Institute; University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Sting; Cancer research; Agonist; KRAS; Sarcoma; Medicine; Cancer; Pathology; Internal medicine; Receptor; Physics","score_opus":0.017011622663489517,"score_gpt":0.2660783263580014,"score_spread":0.24906670369451187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412578767","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979752,0.00046685172,0.0005665156,0.00003812094,0.000016111384,0.00002078157,0.00018918292,0.000038072758,0.0006893104],"genre_scores_gemma":[0.9967529,0.00057016517,0.0007816662,0.000036646215,0.0000094581965,0.000032121716,0.00035700106,0.000008856763,0.001451067],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986184,0.000025175035,0.000014330465,0.000019891593,0.000038052738,0.000040741863],"domain_scores_gemma":[0.99989533,0.000014109787,0.000036220466,0.000012556664,0.0000071781287,0.00003463506],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011302456,0.00039030347,0.00023797403,0.00022948964,0.000088804176,0.00019279854,0.00015111036,0.00024082235,0.0008793105],"category_scores_gemma":[0.00007658968,0.000108951965,0.0002179738,0.00014647849,0.0002215205,0.00021719458,0.0001100392,0.0007126725,0.0002090967],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005492665,0.00018608144,0.00015159075,0.00003885109,0.0000052109294,0.000027752598,0.000013922049,0.00020673535,0.99683195,0.000056454573,0.00004906959,0.001883127],"study_design_scores_gemma":[0.000045380373,0.003196854,0.0016447539,0.0000046770447,0.0000127664025,0.000097330616,0.000022237711,0.0007289278,0.99352115,0.00001735595,0.0007052161,0.0000033413094],"about_ca_topic_score_codex":0.00028999575,"about_ca_topic_score_gemma":0.0008078118,"teacher_disagreement_score":0.0008793105,"about_ca_system_score_codex":0.00015883616,"about_ca_system_score_gemma":0.00019228946,"threshold_uncertainty_score":0.0029416084},"labels":[],"label_agreement":null},{"id":"W4412650692","doi":"10.1016/j.omtm.2025.101536","title":"Early postnatal expression mitigates immune responses to Cas9 in the murine central nervous system","year":2025,"lang":"en","type":"article","venue":"Molecular Therapy — Methods & Clinical Development","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Institute of Neurosciences, Mental Health and Addiction; Canadian Institutes of Health Research","keywords":"Central nervous system; Immune system; Neuroscience; Expression (computer science); Biology; Immunology; Computer science","score_opus":0.03403242700887373,"score_gpt":0.39882964451023045,"score_spread":0.36479721750135674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412650692","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990864,0.0018246053,0.0045800935,0.00016835594,0.00007169546,0.000059338963,0.0004574966,0.00018861625,0.0017858892],"genre_scores_gemma":[0.9907935,0.0011290433,0.0034577963,0.000078861274,0.000015888729,0.000055631284,0.0003555033,0.000060916092,0.0040526777],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983454,0.000025899806,0.000022054035,0.00003702857,0.000040315597,0.00004020613],"domain_scores_gemma":[0.99978226,0.000027327567,0.00008096636,0.000019923082,0.000021635582,0.00006791146],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020396535,0.00026701728,0.0002048869,0.00022684668,0.00009167373,0.0003466625,0.00023264822,0.0003243233,0.0010817668],"category_scores_gemma":[0.00016915669,0.00015604036,0.00018151637,0.0000671788,0.0002705439,0.00026688215,0.0001421956,0.0008671134,0.00031192752],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001625669,0.000034996287,0.000129168,0.000028449906,0.0000033497238,0.000027689382,0.000011604827,0.000032514527,0.9983778,0.00008590758,0.000038078204,0.0010678773],"study_design_scores_gemma":[0.000016618942,0.0005634391,0.0029237627,0.000012023926,0.00001699777,0.00016757121,0.000018725852,0.00050281826,0.99405473,0.0000309601,0.0016890846,0.0000033069362],"about_ca_topic_score_codex":0.00069472246,"about_ca_topic_score_gemma":0.0014010939,"teacher_disagreement_score":0.0010817668,"about_ca_system_score_codex":0.00030380703,"about_ca_system_score_gemma":0.00025464126,"threshold_uncertainty_score":0.0036188364},"labels":[],"label_agreement":null},{"id":"W4412699763","doi":"10.3389/fimmu.2025.1632283","title":"Catch me if you can: viral nucleic acids to host sensors","year":2025,"lang":"en","type":"review","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Leukemia and Lymphoma Society of Canada; Cancer Research Society","keywords":"Nucleic acid; Host (biology); Computational biology; Virology; Biology; Genetics","score_opus":0.011044232588869713,"score_gpt":0.26801911681320273,"score_spread":0.256974884224333,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412699763","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0025738804,0.92537445,0.0032460622,0.031450875,0.017388757,0.00003474737,0.00019144893,0.00026973634,0.019470153],"genre_scores_gemma":[0.02146222,0.8636282,0.0042579924,0.03786541,0.009354152,0.0000864063,0.00049371505,0.00019165689,0.06266025],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99959856,0.00009872529,0.000027983075,0.00006655034,0.00014726377,0.000060861876],"domain_scores_gemma":[0.9995239,0.00019409192,0.000041434378,0.000016463076,0.0001358498,0.00008833292],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007175315,0.00081454555,0.00080176303,0.00067407265,0.0008523815,0.0031169844,0.0007072877,0.0019833548,0.0092949],"category_scores_gemma":[0.0014476852,0.0002854491,0.00063573394,0.00067621557,0.0010746757,0.0048972243,0.001376553,0.0037465328,0.006221313],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028056302,0.00011666142,0.0009216079,0.0065470813,0.00010712398,0.00085929397,0.001906106,0.00043909103,0.033214565,0.041825023,0.4319013,0.48188153],"study_design_scores_gemma":[0.0000044041044,0.000073341354,0.00017619198,0.00036324875,0.000017244987,0.0003941785,0.00038094653,0.00007190813,0.0021262574,0.0049818004,0.9913931,0.000017426912],"about_ca_topic_score_codex":0.00055904203,"about_ca_topic_score_gemma":0.0011008562,"teacher_disagreement_score":0.0092949,"about_ca_system_score_codex":0.00090835465,"about_ca_system_score_gemma":0.0007698276,"threshold_uncertainty_score":0.031094551},"labels":[],"label_agreement":null},{"id":"W4412714215","doi":"10.1016/j.pediatrneurol.2025.07.011","title":"Clinical Characterization of a Multicenter International Cohort of Patients With Aicardi-Goutières Syndrome Homozygous for the RNASEH2B:p.Ala177Thr Variant: Early Clinical Markers of Disease Severity","year":2025,"lang":"en","type":"article","venue":"Pediatric Neurology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital","funders":"Istituto di Ricovero e Cura a Carattere Scientifico Policlinico San Donato; National Institutes of Health; National Center for Advancing Translational Sciences; National Institute of Neurological Disorders and Stroke; Ministero della Salute","keywords":"Cohort; Medicine; Disease; Pediatrics; Internal medicine","score_opus":0.0071298404301196605,"score_gpt":0.2650094445536403,"score_spread":0.2578796041235206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412714215","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99934834,0.000054028653,0.00006132866,0.000024186438,0.0000024236717,0.0000043552554,0.00012958044,0.0000023587493,0.0003733707],"genre_scores_gemma":[0.99930596,0.000056245914,0.000103679035,0.00002925944,0.000012857584,0.000008039358,0.0003641235,0.000004672554,0.000115200965],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997198,0.00005724041,0.00003084301,0.00010535917,0.000037348564,0.000049432398],"domain_scores_gemma":[0.99940026,0.000108152875,0.00018473287,0.00005217268,0.00006794199,0.00018668722],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037083583,0.00063061656,0.0004559622,0.00091066805,0.0008031249,0.00071745313,0.000362078,0.00050193444,0.0016382625],"category_scores_gemma":[0.0012714589,0.00018917353,0.00028121515,0.0006847754,0.00046619165,0.00041787108,0.0005498677,0.0004916736,0.0003039994],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029244102,0.0000690842,0.9918646,0.0000047997078,0.00003676516,0.0022062345,0.00025322445,0.000057318877,0.0032056945,0.00005887254,0.00019234927,0.0017585392],"study_design_scores_gemma":[0.000023563407,0.00021195502,0.9874844,0.0000075083044,0.000035788256,0.0108408835,0.00044424293,0.00020814128,0.0003092778,0.0000747202,0.00035038745,0.000009083464],"about_ca_topic_score_codex":0.0022455521,"about_ca_topic_score_gemma":0.0015960322,"teacher_disagreement_score":0.0022455521,"about_ca_system_score_codex":0.00023390913,"about_ca_system_score_gemma":0.00028585267,"threshold_uncertainty_score":0.005480528},"labels":[],"label_agreement":null},{"id":"W4412750694","doi":"10.1007/s00018-025-05816-4","title":"REGγ regulates antiviral response by activating TBK1-IFNβ signaling through degradation of PPP2CB","year":2025,"lang":"en","type":"article","venue":"Cellular and Molecular Life Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Natural Science Foundation of China; York University","keywords":"TANK-binding kinase 1; Degradation (telecommunications); Cell biology; Chemistry; Signal transduction; Biology; Computer science; Telecommunications; Protein kinase B","score_opus":0.011514433304104264,"score_gpt":0.2581587908083767,"score_spread":0.24664435750427247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412750694","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9660622,0.01584171,0.011761656,0.00028727172,0.00007701038,0.000044669592,0.0007815351,0.00028168905,0.0048622256],"genre_scores_gemma":[0.9938111,0.0026726678,0.0014625972,0.000049383776,0.000013307876,0.000014563623,0.00025544906,0.000017914042,0.0017030856],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998336,0.000034075216,0.000012504528,0.000040506868,0.00002856264,0.000050656672],"domain_scores_gemma":[0.99993396,0.000004508187,0.000025732692,0.000009966506,0.000010345436,0.00001540544],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023370984,0.0005420111,0.0002730263,0.00025265192,0.0001643131,0.0004769569,0.00014235513,0.00017873613,0.0011144659],"category_scores_gemma":[0.00009255907,0.00015153964,0.0003818885,0.00013022887,0.00030919586,0.00023073563,0.0003076281,0.00038865441,0.00040941383],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015162413,0.000008373636,0.0005711699,0.000054029904,0.000009892738,0.0000998611,0.000015643249,0.00011169128,0.996887,0.00022120487,0.000047988826,0.0018214282],"study_design_scores_gemma":[0.000018266568,0.00014480735,0.01073115,0.000012310442,0.000033912318,0.00052873086,0.000057965288,0.00076667976,0.98273164,0.00026217345,0.0047058915,0.00000649556],"about_ca_topic_score_codex":0.0003572905,"about_ca_topic_score_gemma":0.00059434597,"teacher_disagreement_score":0.0011144659,"about_ca_system_score_codex":0.0003274316,"about_ca_system_score_gemma":0.00029401097,"threshold_uncertainty_score":0.003728211},"labels":[],"label_agreement":null},{"id":"W4412767433","doi":"10.1101/2025.07.28.667286","title":"Inhibition of coronaviral exonuclease activity by TRIM-mediated SUMOylation","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"McGill University; National Institutes of Health; Cleveland Clinic","keywords":"Trim; SUMO protein; Exonuclease; Virology; Chemistry; Biology; Computer science; DNA; Ubiquitin; Biochemistry; Operating system; Polymerase","score_opus":0.011968129679153122,"score_gpt":0.22653709903661898,"score_spread":0.21456896935746586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412767433","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899554,0.0015197753,0.0044449936,0.00014083619,0.000040698025,0.000038828697,0.0004970746,0.000104121886,0.0032581592],"genre_scores_gemma":[0.99275887,0.0007022273,0.0030277113,0.000077225995,0.0000084760895,0.000026390064,0.00047928313,0.00001956389,0.002900157],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999161,0.00001379124,0.000010202147,0.00001798041,0.000019417372,0.000022424536],"domain_scores_gemma":[0.9999621,0.000006002215,0.000010177078,0.0000093917615,0.000004548286,0.000007813044],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017682066,0.0001980329,0.00018258202,0.000090216185,0.000111841066,0.00018329229,0.00015095944,0.00018942027,0.001363645],"category_scores_gemma":[0.00009799515,0.00009680585,0.00021140912,0.00008651334,0.00014223532,0.00011369887,0.00018327395,0.00031133508,0.00041262462],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000115005154,0.00002109343,0.00021290957,0.000039710736,0.0000075106723,0.00002970506,0.0000067411133,0.00009131775,0.9967108,0.00017252125,0.00009158952,0.0025012014],"study_design_scores_gemma":[0.000011575898,0.00007971329,0.0011185393,0.0000019900563,0.0000041751755,0.00008228979,0.000004065449,0.00055043196,0.9967024,0.00004430231,0.0013991152,0.0000014474447],"about_ca_topic_score_codex":0.00024983683,"about_ca_topic_score_gemma":0.00045067075,"teacher_disagreement_score":0.001363645,"about_ca_system_score_codex":0.00018024734,"about_ca_system_score_gemma":0.0001645431,"threshold_uncertainty_score":0.0045618415},"labels":[],"label_agreement":null},{"id":"W4412792386","doi":"10.1016/j.bbi.2025.106065","title":"Crosstalk between DNA damage and cGAS-STING immune pathway drives neuroinflammation and dopaminergic neurodegeneration in Parkinson’s disease","year":2025,"lang":"en","type":"article","venue":"Brain Behavior and Immunity","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"National Institute of Neurological Disorders and Stroke; Health Science Center, University of Tennessee; National Institute on Aging; National Institutes of Health","keywords":"Neurodegeneration; Neuroinflammation; Parkinson's disease; Dopaminergic; Neuroscience; Crosstalk; Immune system; Sting; Medicine; Disease; Immunology; Biology; Dopamine; Physics; Internal medicine","score_opus":0.012505767169388452,"score_gpt":0.25637886115896336,"score_spread":0.2438730939895749,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412792386","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972851,0.0014449368,0.00048406378,0.00008390896,0.00001320055,0.000008669946,0.00014897132,0.000025031924,0.00050613424],"genre_scores_gemma":[0.9987841,0.0003145684,0.00024366987,0.000031145068,0.000005908077,0.000008365977,0.00008447227,0.000002124854,0.00052554224],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979,0.00003342256,0.000021114975,0.00006141671,0.000037631035,0.00005639904],"domain_scores_gemma":[0.9999043,0.000005220743,0.000043017193,0.00000664923,0.000010462024,0.000030272524],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020291537,0.00033217046,0.00033872988,0.00038125462,0.00026591218,0.00045949334,0.0001558545,0.0005171403,0.001210072],"category_scores_gemma":[0.0001267043,0.00024277873,0.00036571725,0.00014388263,0.0004871308,0.00031385155,0.0003594377,0.00062314473,0.00017279912],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018882084,0.00012587023,0.02351273,0.00013915873,0.00009102689,0.000981303,0.00015909805,0.00026199257,0.9660569,0.00038539898,0.00018854518,0.0062098033],"study_design_scores_gemma":[0.00014894278,0.0019952303,0.50835603,0.00011322285,0.00045947116,0.004665364,0.0012797087,0.0050883684,0.4705473,0.0019010463,0.0054003447,0.000045009587],"about_ca_topic_score_codex":0.00079151004,"about_ca_topic_score_gemma":0.001586428,"teacher_disagreement_score":0.001210072,"about_ca_system_score_codex":0.0005484311,"about_ca_system_score_gemma":0.00030485503,"threshold_uncertainty_score":0.0040480494},"labels":[],"label_agreement":null},{"id":"W4412934500","doi":"10.1073/pnas.2423066122","title":"Influenza A virus NS1 protein mimics oncogenic PI3K resulting in isoform specific cellular redistribution and activation","year":2025,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Victoria","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Bimolecular fluorescence complementation; Biology; Cell biology; Gene isoform; PI3K/AKT/mTOR pathway; Virus; Protein subunit; Phosphoinositide 3-kinase; Signal transduction; Virology; Genetics; Gene","score_opus":0.03311862027758522,"score_gpt":0.29834121651329415,"score_spread":0.26522259623570893,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412934500","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99563295,0.00038696395,0.0020985412,0.00007527409,0.000025308194,0.000026559259,0.000340953,0.00006151648,0.0013518342],"genre_scores_gemma":[0.9957295,0.0001943488,0.0017838649,0.000032834163,0.0000043080468,0.000032917655,0.00063452387,0.00001538425,0.0015723024],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998154,0.00003900745,0.000016247177,0.00003921637,0.000038324986,0.00005175095],"domain_scores_gemma":[0.9999335,0.000012874777,0.00001578867,0.000011084027,0.0000065517306,0.000020213418],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000197179,0.00034316207,0.00017815015,0.00017750886,0.00016193134,0.00019666679,0.00028450004,0.00024114862,0.0009032763],"category_scores_gemma":[0.000085768384,0.00011886513,0.0001768989,0.00018286583,0.00021617934,0.00013475947,0.0001844545,0.0005793601,0.0002680718],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008538637,0.000022894605,0.000048664166,0.00000865794,0.0000019765646,0.000013495456,0.00000547557,0.00003166384,0.99945205,0.00008301985,0.000022156168,0.00022455929],"study_design_scores_gemma":[0.0000083514615,0.00012438271,0.001118249,0.0000016672969,0.000004628109,0.00007693877,0.000013323445,0.0011090484,0.9968286,0.000020785925,0.0006920875,0.0000018908181],"about_ca_topic_score_codex":0.00090035406,"about_ca_topic_score_gemma":0.00082105683,"teacher_disagreement_score":0.0009032763,"about_ca_system_score_codex":0.00046991312,"about_ca_system_score_gemma":0.00017597328,"threshold_uncertainty_score":0.0034094453},"labels":[],"label_agreement":null},{"id":"W4413008970","doi":"10.1097/ppo.0000000000000775","title":"Radiation-dependent Nucleic Acid Sensing, and Its Possible Impact on Radiotherapy","year":2025,"lang":"en","type":"review","venue":"The Cancer Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Cancer Research","funders":"","keywords":"Nucleic acid; Innate immune system; DNA damage; Wnt signaling pathway; Biology; Radiation therapy; DNA; Tumor microenvironment; Immune system; Cancer research; Signalling pathways; AIM2; DNA repair; Cell biology; Tumor cells; Signal transduction; Immunology; Genetics; Medicine","score_opus":0.022834841984641707,"score_gpt":0.3543323325252889,"score_spread":0.3314974905406472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413008970","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000095312884,0.99857724,0.0000798681,0.0002402765,0.00030019184,0.0000019567883,0.0000068783766,0.00000404153,0.0006943209],"genre_scores_gemma":[0.0006310399,0.99790347,0.0000986029,0.00022627437,0.00035237384,0.0000043733307,0.000016771439,0.0000014355163,0.0007656292],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99984086,0.000029073111,0.000020730984,0.000028874716,0.00006184892,0.000018581699],"domain_scores_gemma":[0.9998246,0.0000805316,0.000025424875,0.000005955481,0.000040937768,0.00002263864],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045590266,0.00064155395,0.00092403335,0.0014828036,0.00022691829,0.00084504526,0.0006105362,0.0011963499,0.0026028203],"category_scores_gemma":[0.0005341412,0.00023786875,0.00032864694,0.001247426,0.00044710335,0.001250313,0.00063103985,0.0017362979,0.0020225556],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008926706,0.000058763933,0.00016698083,0.012946815,0.00005050308,0.0003211243,0.00008793122,0.00045583982,0.003996546,0.006298237,0.03647461,0.9390533],"study_design_scores_gemma":[0.0000081481385,0.00007462524,0.0007137427,0.0020672842,0.000029799594,0.0015864088,0.00005370853,0.000059707305,0.0005044018,0.001959153,0.99293077,0.000012189277],"about_ca_topic_score_codex":0.00049697305,"about_ca_topic_score_gemma":0.0009298557,"teacher_disagreement_score":0.0026028203,"about_ca_system_score_codex":0.00055594416,"about_ca_system_score_gemma":0.0005831526,"threshold_uncertainty_score":0.008707285},"labels":[],"label_agreement":null},{"id":"W4413009694","doi":"10.1016/j.intimp.2025.115310","title":"Distinct STING–IRF3 activation determines IL-35+ Breg differentiation in rodent malaria","year":2025,"lang":"en","type":"article","venue":"International Immunopharmacology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Chinese Academy of Medical Sciences Initiative for Innovative Medicine; National Natural Science Foundation of China","keywords":"Sting; IRF3; Malaria; Immunology; Rodent; Biology; Rodent model; Ecology; Endocrinology; Innate immune system; Immune system; Physics","score_opus":0.01078786334176645,"score_gpt":0.29926357758790756,"score_spread":0.2884757142461411,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413009694","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99488246,0.0008246759,0.0017705705,0.00008366188,0.000018581484,0.000020493662,0.0004023803,0.00009731444,0.0018998946],"genre_scores_gemma":[0.99529994,0.00030146938,0.0012245005,0.000071580536,0.000008139307,0.000020917802,0.0003252252,0.000031199907,0.0027170063],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998467,0.00002056048,0.000009982415,0.00003043096,0.000019674031,0.0000725664],"domain_scores_gemma":[0.9999058,0.000008282613,0.00003516291,0.000010623814,0.000007691313,0.000032369906],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011747645,0.00017842145,0.00014792307,0.00044260477,0.0001826304,0.00032348488,0.00014090982,0.0002896697,0.0021262688],"category_scores_gemma":[0.00012605258,0.00018971217,0.00022361903,0.00011795001,0.0003217468,0.00030945864,0.00029604827,0.001009826,0.0005045636],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020721163,0.000014235369,0.0006303301,0.000030101093,0.000002657006,0.000060019287,0.00004734397,0.00003914867,0.9971656,0.00038960748,0.00005546389,0.0013583382],"study_design_scores_gemma":[0.000040757343,0.0005268684,0.07270806,0.000044240664,0.000041404943,0.00073006673,0.00053505256,0.0015492406,0.91696,0.00065146765,0.006195231,0.00001754353],"about_ca_topic_score_codex":0.00032052156,"about_ca_topic_score_gemma":0.0011583572,"teacher_disagreement_score":0.0021262688,"about_ca_system_score_codex":0.00031007436,"about_ca_system_score_gemma":0.00010532476,"threshold_uncertainty_score":0.007113099},"labels":[],"label_agreement":null},{"id":"W4413137518","doi":"10.1002/advs.202503977","title":"The NSP5, ORF6 and NSP13 of SARS‐CoV‐2 Cooperate to Modulate Inflammatory Cell Death Activation","year":2025,"lang":"en","type":"article","venue":"Advanced Science","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Shenzhen Bay Laboratory; National Natural Science Foundation of China","keywords":"Coronavirus disease 2019 (COVID-19); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Chemistry; Medicine; Internal medicine; Disease","score_opus":0.010123948086672096,"score_gpt":0.27892028663218493,"score_spread":0.2687963385455128,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413137518","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99265563,0.0031408225,0.0023988301,0.000053100088,0.000026535072,0.000028553517,0.00017438168,0.000032984495,0.0014892551],"genre_scores_gemma":[0.9953048,0.0011831563,0.0016088546,0.00004313639,0.000008667671,0.000025514386,0.00038841195,0.000005863615,0.0014316199],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998611,0.000022126038,0.000016787539,0.000022841503,0.000041293224,0.00003587744],"domain_scores_gemma":[0.99992895,0.000007704051,0.000026922933,0.000008576126,0.000011525821,0.000016277652],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015424038,0.00042591666,0.00021338911,0.000122046746,0.00013502096,0.00019415964,0.00011714286,0.00021861652,0.0007836023],"category_scores_gemma":[0.000095643925,0.0000925822,0.00038535523,0.000071466566,0.00012990937,0.00021563833,0.00020877397,0.00033408837,0.00019458182],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011848289,0.000018874875,0.00057968654,0.000058156726,0.0000076192755,0.00005900832,0.000008398166,0.000055619686,0.99765575,0.00005614505,0.000018097273,0.0013641531],"study_design_scores_gemma":[0.00002440745,0.00059724913,0.026483247,0.000012328841,0.00002983086,0.0007291606,0.00004549019,0.0010965677,0.96816593,0.0000948455,0.002715204,0.0000058806927],"about_ca_topic_score_codex":0.00018825925,"about_ca_topic_score_gemma":0.00029959693,"teacher_disagreement_score":0.0007836023,"about_ca_system_score_codex":0.00016673781,"about_ca_system_score_gemma":0.0001580382,"threshold_uncertainty_score":0.0026213527},"labels":[],"label_agreement":null},{"id":"W4413438575","doi":"10.1101/2025.08.15.670603","title":"DFFB suppresses interferon to enable cancer persister cell regrowth","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"National Cancer Institute; V Foundation for Cancer Research; American Cancer Society","keywords":"Multidrug tolerance; Interferon; Cancer; Cancer research; Biology; Virology; Bacteria; Genetics; Biofilm","score_opus":0.012885131031649313,"score_gpt":0.2325243459250136,"score_spread":0.21963921489336427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413438575","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98020947,0.0044560446,0.007533724,0.0004377469,0.00014107261,0.00003860129,0.0006746691,0.00033773403,0.00617094],"genre_scores_gemma":[0.9873527,0.0005025339,0.0024231353,0.0000966062,0.000027746008,0.000021150263,0.00044592193,0.000057789443,0.009072332],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990773,0.000013309856,0.0000064287838,0.000018554538,0.000027947133,0.000026026251],"domain_scores_gemma":[0.99989533,0.000024138091,0.000025519666,0.000023228346,0.00000913663,0.000022550816],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014693971,0.00026172877,0.000199303,0.00019893561,0.00016602312,0.00029779202,0.0002055922,0.0003329209,0.0026251439],"category_scores_gemma":[0.00009768447,0.0000747049,0.00016892281,0.00009085523,0.00022399417,0.00017303012,0.00023445081,0.00058990164,0.0009314301],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009695914,0.00003383466,0.00013183236,0.000025423049,0.0000032975024,0.000060359904,0.000013439977,0.000057701163,0.99703443,0.0005018033,0.0001821205,0.0018586621],"study_design_scores_gemma":[0.000013349694,0.00008928756,0.0006940247,0.0000040060618,0.0000028228587,0.00016465716,0.0000083569175,0.0004962301,0.99444526,0.0001196542,0.0039605596,0.000001719455],"about_ca_topic_score_codex":0.00046279014,"about_ca_topic_score_gemma":0.0004680812,"teacher_disagreement_score":0.0026251439,"about_ca_system_score_codex":0.00033127706,"about_ca_system_score_gemma":0.00016396471,"threshold_uncertainty_score":0.00878197},"labels":[],"label_agreement":null},{"id":"W4413779264","doi":"10.18632/aging.206312","title":"Bleomycin promotes cellular senescence and activation of the cGAS-STING pathway without direct effect on fibrosis in an idiopathic pulmonary fibrosis model","year":2025,"lang":"en","type":"article","venue":"Aging","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Japan Society for the Promotion of Science; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Bleomycin; Pulmonary fibrosis; Senescence; Sting; Fibrosis; Idiopathic pulmonary fibrosis; Lung fibrosis; Medicine; Immunology; Cancer research; Lung; Pathology; Internal medicine; Engineering","score_opus":0.009279401946749609,"score_gpt":0.2360005585954014,"score_spread":0.22672115664865178,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413779264","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99396646,0.0018308663,0.0022855513,0.00010460139,0.00006645953,0.000056902856,0.00024263655,0.00010405864,0.0013423736],"genre_scores_gemma":[0.9942946,0.00097594864,0.0016631515,0.00006890705,0.000019262337,0.000065428554,0.00034192955,0.000013896999,0.0025569478],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985504,0.000029391753,0.000015796664,0.000026471265,0.000030104833,0.00004301458],"domain_scores_gemma":[0.99985945,0.000017563001,0.000039731203,0.000020250973,0.000013407051,0.000049668033],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019200676,0.0003372287,0.00025339014,0.00035249355,0.00012879312,0.00014225906,0.00014404228,0.00032321268,0.0011747847],"category_scores_gemma":[0.00009272666,0.00012358416,0.00033403042,0.00012877138,0.00019700591,0.00024141802,0.00013594699,0.0007839088,0.00021485229],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002533153,0.00013067636,0.00016137517,0.000027068938,0.00000441793,0.000049316674,0.000017344055,0.00003421224,0.9984977,0.000050903025,0.000038467653,0.000735225],"study_design_scores_gemma":[0.000045626428,0.0024247793,0.0055986894,0.000013430339,0.000021854128,0.0002408561,0.000036131325,0.001258925,0.9885914,0.000063275016,0.0016996631,0.0000055238766],"about_ca_topic_score_codex":0.00039514247,"about_ca_topic_score_gemma":0.0007898411,"teacher_disagreement_score":0.0011747847,"about_ca_system_score_codex":0.00014473576,"about_ca_system_score_gemma":0.00015201201,"threshold_uncertainty_score":0.0039300323},"labels":[],"label_agreement":null},{"id":"W4413830973","doi":"10.1007/s00018-025-05864-w","title":"Regulation of antiviral and antimicrobial innate immunity and immune evasion","year":2025,"lang":"en","type":"review","venue":"Cellular and Molecular Life Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"American Heart Association","keywords":"Innate immune system; Evasion (ethics); Immunity; Antimicrobial; Immune system; Biology; Immunology; Virology; Microbiology","score_opus":0.01822407385547255,"score_gpt":0.2817409507220019,"score_spread":0.26351687686652936,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413830973","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00010608976,0.99696165,0.00023009707,0.0003159885,0.0003786174,0.0000043872747,0.00001033966,0.000009347164,0.001983474],"genre_scores_gemma":[0.0009944747,0.99679464,0.00025009486,0.00027291637,0.0003925658,0.0000098237015,0.00002554322,0.0000020361015,0.0012578733],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99979645,0.0000368565,0.000024013238,0.000038745522,0.00007774534,0.000026274973],"domain_scores_gemma":[0.9998348,0.000059349295,0.000024982517,0.00000853577,0.00004385342,0.00002843952],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047716906,0.00091821887,0.0010790259,0.001798101,0.00028205692,0.0011983755,0.00081526383,0.0011473869,0.0028098351],"category_scores_gemma":[0.0003764053,0.0002283072,0.00029406534,0.0015261743,0.0008035187,0.0015610452,0.0008173613,0.0018109108,0.002555803],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005123989,0.00006401366,0.00012530218,0.008856842,0.000047715945,0.00017498164,0.00007601811,0.00032941854,0.005294905,0.0155869,0.034601852,0.9347909],"study_design_scores_gemma":[0.000006938279,0.000047790145,0.00037264574,0.001169847,0.000018415327,0.00067107007,0.000035774123,0.00006169436,0.0006883734,0.0032376256,0.99367946,0.000010348501],"about_ca_topic_score_codex":0.00043136373,"about_ca_topic_score_gemma":0.00063325913,"teacher_disagreement_score":0.0028098351,"about_ca_system_score_codex":0.0007233615,"about_ca_system_score_gemma":0.00088619196,"threshold_uncertainty_score":0.009399772},"labels":[],"label_agreement":null},{"id":"W4414029435","doi":"10.1101/2025.09.01.672152","title":"USP18 Inhibition Enhances Type I Interferon Signalling and Immune Activation in the Tumour Microenvironment of Triple-Negative Breast Cancer","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics","keywords":"Signalling; Immune system; Cancer research; Interferon; Breast cancer; Tumor microenvironment; Cancer; Triple-negative breast cancer; Biology; Immune escape; Immunology; Medicine; Internal medicine; Cell biology","score_opus":0.010809962415361214,"score_gpt":0.2287351486471245,"score_spread":0.21792518623176327,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414029435","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962871,0.0016303498,0.00088940427,0.00008510307,0.00003023409,0.000015459802,0.00028059477,0.00006014602,0.0007216315],"genre_scores_gemma":[0.99756855,0.0006414228,0.0005436134,0.000037164096,0.000007278288,0.000016414488,0.0002971074,0.000010739967,0.0008776103],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999119,0.000012138614,0.000009491595,0.000013642631,0.000027165994,0.000025619656],"domain_scores_gemma":[0.99993765,0.000008783322,0.000021692831,0.0000062928734,0.0000065121953,0.000018999117],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010992676,0.00021077371,0.00024108081,0.000157475,0.00008467608,0.00020824434,0.00010387531,0.00019501756,0.0009819088],"category_scores_gemma":[0.00006405206,0.00008342624,0.00021303922,0.000086339365,0.00016151562,0.00011561147,0.0001224864,0.00041055726,0.00023130744],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022575764,0.00003439448,0.00024677385,0.000045655925,0.0000057549037,0.00005814021,0.000009513638,0.000058611076,0.9975446,0.00005190148,0.000074241005,0.0016448468],"study_design_scores_gemma":[0.000033311313,0.0006061815,0.00547691,0.000006126044,0.000024712832,0.00048723377,0.00002849306,0.0010562344,0.9884975,0.000048537473,0.0037296093,0.0000051755483],"about_ca_topic_score_codex":0.00027082546,"about_ca_topic_score_gemma":0.00032568848,"teacher_disagreement_score":0.0009819088,"about_ca_system_score_codex":0.00017800413,"about_ca_system_score_gemma":0.00011782343,"threshold_uncertainty_score":0.0032847524},"labels":[],"label_agreement":null},{"id":"W4414078635","doi":"10.1016/j.biomaterials.2025.123690","title":"Resolve and regulate: Alum nanoplatform coordinating STING availability and agonist delivery for enhanced anti-tumor immunotherapy","year":2025,"lang":"en","type":"article","venue":"Biomaterials","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Key Research and Development Program of China Stem Cell and Translational Research; State Key Laboratory of Biochemical Engineering; Youth Innovation Promotion Association of the Chinese Academy of Sciences; Chinese Academy of Sciences; National Natural Science Foundation of China; National Key Research and Development Program of China; Canadian Anesthesiologists' Society; Maryland Humanities Council","keywords":"Sting; Stimulator of interferon genes; Agonist; Immunotherapy; Cancer immunotherapy; TLR7; Tumor microenvironment; Chemokine","score_opus":0.010803460432407095,"score_gpt":0.2609619419796311,"score_spread":0.250158481547224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414078635","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95815253,0.002016865,0.033449985,0.00050360395,0.00027310295,0.00013025626,0.00017845654,0.000492335,0.0048029283],"genre_scores_gemma":[0.9803137,0.0006882376,0.014166698,0.0002674731,0.00005601394,0.000045465593,0.00008457184,0.000049306233,0.0043285997],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998834,0.0000124389835,0.000010134342,0.000029266579,0.000033627977,0.000031164658],"domain_scores_gemma":[0.9999045,0.0000183851,0.000032815267,0.0000088981815,0.000020219502,0.000015193472],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019872122,0.00034820318,0.00015626462,0.00017100807,0.00018826823,0.00040544523,0.00020094495,0.00041003764,0.0017031238],"category_scores_gemma":[0.00021701801,0.00015497749,0.0001411951,0.00007886262,0.00018904604,0.0005086947,0.00034514477,0.00042327403,0.0004588985],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005943602,0.000021261496,0.000084157924,0.000034679804,0.0000026478142,0.000020289082,0.000011681902,0.00022229485,0.9959436,0.0002688819,0.000119569755,0.0032114834],"study_design_scores_gemma":[0.00000886976,0.00011791379,0.00018849292,0.0000041956155,0.0000065250615,0.00004070397,0.000015173784,0.0033952242,0.9945516,0.00008126788,0.0015853695,0.000004630705],"about_ca_topic_score_codex":0.00027779702,"about_ca_topic_score_gemma":0.0007975948,"teacher_disagreement_score":0.0017031238,"about_ca_system_score_codex":0.0003226333,"about_ca_system_score_gemma":0.00032347627,"threshold_uncertainty_score":0.005697489},"labels":[],"label_agreement":null},{"id":"W4414268162","doi":"10.1038/s41557-025-01930-9","title":"Tumour-specific STING agonist synthesis via a two-component prodrug system","year":2025,"lang":"en","type":"article","venue":"Nature Chemistry","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Discovery Centre","funders":"Alzheimer’s Research UK","keywords":"Prodrug; Moiety; Agonist; Sting; Dimer; Chemical synthesis; Covalent bond; Antagonist","score_opus":0.004420284166327814,"score_gpt":0.22902704579680644,"score_spread":0.22460676163047863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414268162","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9542196,0.002102698,0.037880182,0.00020920091,0.00007673674,0.0002535917,0.00026324164,0.0002748022,0.0047200024],"genre_scores_gemma":[0.98017097,0.00080121175,0.01563046,0.000069070644,0.000016268315,0.00008065233,0.00021819827,0.000024767334,0.002988463],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990284,0.000020451374,0.0000068795907,0.000023695473,0.000024201938,0.000021915941],"domain_scores_gemma":[0.99994946,0.000007068539,0.000016853945,0.000008090745,0.0000065268528,0.000011961703],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014682066,0.00045704222,0.00022238817,0.00018749184,0.00010201258,0.00022240957,0.00023696263,0.00037874133,0.0009292778],"category_scores_gemma":[0.00010145497,0.00014446207,0.00017502414,0.00013152412,0.00015276644,0.00028030985,0.00022994303,0.0005688079,0.00043152002],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003911343,0.000030620282,0.00003899347,0.000030003499,0.000003513424,0.000034102693,0.000012280318,0.00018387173,0.99703324,0.0002943307,0.00003734925,0.002262499],"study_design_scores_gemma":[0.000015541431,0.00064299867,0.00018639785,0.0000030238105,0.000008366528,0.0001240715,0.0000059078748,0.0008499015,0.99587846,0.000045872148,0.0022352464,0.000004292692],"about_ca_topic_score_codex":0.00014285732,"about_ca_topic_score_gemma":0.0002619462,"teacher_disagreement_score":0.0009292778,"about_ca_system_score_codex":0.000266974,"about_ca_system_score_gemma":0.00018807303,"threshold_uncertainty_score":0.0031086802},"labels":[],"label_agreement":null},{"id":"W4414465211","doi":"10.1158/2326-6074.cimm25-a022","title":"Abstract A022: Therapeutic inhibition of TREX1 elicits type I interferon–mediated antitumor immunity with minimal autoimmune toxicity","year":2025,"lang":"en","type":"article","venue":"Cancer Immunology Research","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Immune system; Knockout mouse; Immunotherapy; Cancer immunotherapy; Immunity; Downregulation and upregulation; Inflammation; Cancer; Interferon; Cytotoxic T cell","score_opus":0.04960441073779465,"score_gpt":0.3623942273463089,"score_spread":0.31278981660851424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414465211","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9799789,0.0027244915,0.005501738,0.00025980908,0.00013034664,0.00019155604,0.0026064506,0.0003779299,0.008228708],"genre_scores_gemma":[0.9848595,0.0011374619,0.0028377923,0.00014170117,0.000023087407,0.00012301399,0.0023415273,0.00003492573,0.008500862],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999018,0.000013022302,0.000008108078,0.000022152508,0.000031310938,0.00002358041],"domain_scores_gemma":[0.9999492,0.0000056541453,0.000011538967,0.000006516452,0.000009162366,0.000017839682],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012659404,0.00052340265,0.00032473973,0.00019226893,0.000119506,0.00027472823,0.00028663728,0.00038265507,0.0036979725],"category_scores_gemma":[0.00006868548,0.00010313693,0.00026342712,0.0001545248,0.00012939348,0.00018677098,0.000108700006,0.0009450867,0.0008047616],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00056804833,0.0002173648,0.00006994098,0.000081858925,0.000011422973,0.00004803998,0.000007542237,0.00026123805,0.9953425,0.00011294711,0.0003423704,0.0029368943],"study_design_scores_gemma":[0.00017990363,0.0038155054,0.0009807032,0.00000974374,0.000023820392,0.00026709563,0.000011427287,0.0010734,0.9896679,0.000048347494,0.0039153937,0.000006822542],"about_ca_topic_score_codex":0.00025547488,"about_ca_topic_score_gemma":0.00041320364,"teacher_disagreement_score":0.0036979725,"about_ca_system_score_codex":0.0001668345,"about_ca_system_score_gemma":0.00022525327,"threshold_uncertainty_score":0.012370884},"labels":[],"label_agreement":null},{"id":"W4414595530","doi":"10.1371/journal.ppat.1013549","title":"The tegument protein VP22 of pseudorabies virus inhibits cGAS condensation by inducing nuclear-to-cytoplasmic translocation of DDX21","year":2025,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Natural Science Foundation of Jiangsu Province; National Natural Science Foundation of China","keywords":"Pseudorabies; Viral tegument; Innate immune system; Helicase; Virus; Viral replication; Antiviral protein","score_opus":0.007284380424322332,"score_gpt":0.22242039939828975,"score_spread":0.21513601897396742,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414595530","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995889,0.0013954738,0.001650105,0.00005593157,0.000019924728,0.000014886487,0.00007485493,0.000046215624,0.00085353735],"genre_scores_gemma":[0.9969631,0.00048650894,0.0011320094,0.000027997323,0.0000072691137,0.000014359216,0.00019722835,0.000011347359,0.0011603157],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990904,0.000020009737,0.000007704662,0.00001392906,0.000025465753,0.000023743485],"domain_scores_gemma":[0.999954,0.000008448668,0.00001425008,0.000007662704,0.0000036782367,0.000011853998],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010378918,0.0003766325,0.00019349837,0.00009145745,0.000111655114,0.00027418634,0.00015708822,0.000201819,0.0005879343],"category_scores_gemma":[0.00008521094,0.00008607162,0.00015957271,0.00006216492,0.00021891564,0.00017321449,0.00017338352,0.0003418558,0.0002061023],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044871173,0.00001661751,0.00007835902,0.000013529951,0.000003026859,0.000021512982,0.0000041333255,0.000046288336,0.99906296,0.00007454997,0.000015523708,0.00061868207],"study_design_scores_gemma":[0.0000063738553,0.00016460745,0.0012761713,0.0000013890688,0.000003708821,0.00010968305,0.000006533488,0.00057545304,0.99690396,0.000020814572,0.0009297869,0.0000015747898],"about_ca_topic_score_codex":0.00027919415,"about_ca_topic_score_gemma":0.00032717263,"teacher_disagreement_score":0.0005879343,"about_ca_system_score_codex":0.00023120998,"about_ca_system_score_gemma":0.00014790558,"threshold_uncertainty_score":0.001966834},"labels":[],"label_agreement":null},{"id":"W4414845098","doi":"10.1038/s41419-025-07999-x","title":"IRE1α translational suppression potentiates STING-dependent chemoresistance in pancreatic cancer","year":2025,"lang":"en","type":"article","venue":"Cell Death and Disease","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pancreas Centre (Canada)","funders":"Zhejiang University; National Natural Science Foundation of China; Natural Science Foundation of Shanghai","keywords":"Sting; Pancreatic cancer; Downregulation and upregulation; Signal transduction; Chemotherapy; Proteostasis; Unfolded protein response; Apoptosis; Transmembrane protein","score_opus":0.007657731004420635,"score_gpt":0.2455209953551076,"score_spread":0.23786326435068697,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414845098","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99639326,0.001432641,0.0007278268,0.00009251055,0.000057858895,0.00002826939,0.00013033891,0.000076552176,0.001060716],"genre_scores_gemma":[0.99749666,0.00089734106,0.00048994354,0.000046827798,0.000016221993,0.000026743197,0.00027648106,0.000010637191,0.0007392316],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986386,0.00003234031,0.000019159868,0.000022707123,0.000025624975,0.00003629367],"domain_scores_gemma":[0.99991274,0.00001321481,0.000024638837,0.00001734111,0.0000057437533,0.000026291968],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021924586,0.0003117411,0.00045967227,0.000222904,0.00013669612,0.00026627342,0.00014480244,0.00019388623,0.0011525495],"category_scores_gemma":[0.0001167609,0.00011461292,0.00026185907,0.00018887613,0.00023898586,0.0002090672,0.00017270788,0.0009107283,0.00026464],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005840237,0.00022873173,0.0004144199,0.00006778264,0.000014349823,0.000068275775,0.000020257386,0.00015667846,0.9939129,0.00009036431,0.00014734534,0.0042949356],"study_design_scores_gemma":[0.000106832806,0.0038479767,0.010229936,0.00001653448,0.000059440998,0.0004735158,0.000054904987,0.0018591478,0.9790171,0.00006890511,0.004257659,0.0000081154485],"about_ca_topic_score_codex":0.00014350747,"about_ca_topic_score_gemma":0.0002916071,"teacher_disagreement_score":0.0011525495,"about_ca_system_score_codex":0.00018751899,"about_ca_system_score_gemma":0.0001763916,"threshold_uncertainty_score":0.0038556457},"labels":[],"label_agreement":null},{"id":"W4414887720","doi":"10.1080/21645515.2025.2567703","title":"PV-10 enhances immune responses in hepatitis B vaccination through STING pathway","year":2025,"lang":"en","type":"article","venue":"Human Vaccines & Immunotherapeutics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; University of Calgary","funders":"Alberta Children's Hospital Foundation; Children's Hospital Foundation","keywords":"Sting; Immune system; HBsAg; Chemokine; Hepatitis B; Adjuvant; Cytokine; Antigen; Hepatitis B virus","score_opus":0.02255753530461743,"score_gpt":0.309775901581242,"score_spread":0.2872183662766246,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414887720","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997074,0.0013476142,0.0005974267,0.00006083608,0.000029682633,0.000022940681,0.0000521177,0.000035483376,0.0007797979],"genre_scores_gemma":[0.997546,0.00069758337,0.00062512694,0.000059167432,0.0000090847625,0.000015130049,0.00011049273,0.000004829443,0.00093251717],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999083,0.000029142697,0.0000047525627,0.0000090440235,0.000016785722,0.00003186312],"domain_scores_gemma":[0.99995685,0.000009161388,0.000011020517,0.0000033764115,0.000004492462,0.000015108235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000111655114,0.00026021496,0.00015590295,0.0001183538,0.00005863318,0.00014515968,0.00011813495,0.00022605859,0.0012265075],"category_scores_gemma":[0.000077994024,0.000095664356,0.0001898003,0.00005534598,0.00013022874,0.00014791658,0.00012953741,0.0005811941,0.00023646386],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026201643,0.00011355285,0.00014727858,0.000052855958,0.0000039703523,0.000025178739,0.0000102585045,0.00009949546,0.99774843,0.000022023096,0.000030900017,0.001484037],"study_design_scores_gemma":[0.000051153747,0.00297942,0.002995309,0.000010067306,0.000020180143,0.00014518981,0.000025133068,0.001338975,0.9909259,0.000036399648,0.0014681101,0.0000041065796],"about_ca_topic_score_codex":0.0002526211,"about_ca_topic_score_gemma":0.00044949257,"teacher_disagreement_score":0.0012265075,"about_ca_system_score_codex":0.00012927434,"about_ca_system_score_gemma":0.00011354371,"threshold_uncertainty_score":0.004103124},"labels":[],"label_agreement":null},{"id":"W4415100791","doi":"10.1016/j.neuron.2025.09.022","title":"Integrated omics reveals disease-associated radial glia-like cells with epigenetically dysregulated interferon response in multiple sclerosis","year":2025,"lang":"en","type":"article","venue":"Neuron","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute on Aging; Medical Research Council; National Institutes of Health; UK Dementia Research Institute; Alzheimer's Society; Wellcome Trust; Mauritius Research Council; Cambridge Trust; Multiple Sclerosis Society of Canada; Austrian Science Fund; Alzheimer’s Research UK; UK Research and Innovation; European Committee for Treatment and Research in Multiple Sclerosis; National Multiple Sclerosis Society","keywords":"Reprogramming; Multiple sclerosis; Senescence; Paracrine signalling; Interferon; Cell; Inflammation; Transcription factor; Population","score_opus":0.01675874575444099,"score_gpt":0.21848176193389537,"score_spread":0.20172301617945437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415100791","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9705404,0.0036971965,0.017529497,0.0002781123,0.00004183679,0.000023410794,0.0055234595,0.00033718185,0.0020288886],"genre_scores_gemma":[0.97693604,0.0017181007,0.014975341,0.00020319424,0.000021200744,0.000026832935,0.004352725,0.000060740076,0.0017058833],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998692,0.000012863003,0.000011958895,0.000047185807,0.000034513578,0.000024260327],"domain_scores_gemma":[0.9998988,0.000017182783,0.00003839883,0.00001860645,0.00001556661,0.000011361362],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000259402,0.00023585702,0.00031334386,0.0007299741,0.00020667337,0.00059245067,0.0001270044,0.00026819351,0.00074899016],"category_scores_gemma":[0.00016408435,0.000121115205,0.00027166362,0.000543204,0.00017590972,0.00024820288,0.00036562711,0.00032999224,0.00019203038],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012400851,0.000011952818,0.00882084,0.00008025213,0.000047575664,0.00014140409,0.000071904215,0.00021046693,0.97993547,0.00029862393,0.00016932473,0.010088179],"study_design_scores_gemma":[0.000022541022,0.00023351036,0.41503558,0.00008172888,0.00038109618,0.0023742039,0.0006452472,0.007314514,0.54973215,0.0027260869,0.02141784,0.000035483383],"about_ca_topic_score_codex":0.0004896825,"about_ca_topic_score_gemma":0.0017278707,"teacher_disagreement_score":0.00074899016,"about_ca_system_score_codex":0.00027137832,"about_ca_system_score_gemma":0.00021265872,"threshold_uncertainty_score":0.0025056005},"labels":[],"label_agreement":null},{"id":"W4415219370","doi":"10.1101/2025.10.14.682353","title":"Induction of cellular totipotency by NACC1-driven feed-forward regulation","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"","keywords":"Totipotent; Chromatin; Embryonic stem cell; Retrotransposon; Regulation of gene expression; Gene expression; Mechanism (biology); Gene; Cell fate determination","score_opus":0.008884194826562454,"score_gpt":0.20940878953960151,"score_spread":0.20052459471303907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415219370","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9679124,0.0030483296,0.021706687,0.0002942986,0.000117630494,0.00007026309,0.0011018378,0.00058241957,0.005166222],"genre_scores_gemma":[0.9861491,0.00078601914,0.0068204133,0.00012227421,0.000018434537,0.00004688768,0.00089343695,0.00007612552,0.005087285],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998652,0.000013109172,0.0000070184733,0.000043802087,0.0000499419,0.000020978345],"domain_scores_gemma":[0.99985206,0.00002930683,0.00004065189,0.000024948975,0.00002403382,0.000028996154],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016100342,0.00039515927,0.00025862904,0.00024053942,0.00017356318,0.00035708825,0.0002191065,0.00021627314,0.0012594939],"category_scores_gemma":[0.00014253551,0.00014527958,0.00023946984,0.00012019228,0.00027487785,0.00020239539,0.00034274225,0.0006797483,0.00045103024],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023112541,0.0000055867254,0.00020076857,0.000030465753,0.0000029955706,0.000021553717,0.000009414209,0.000071524206,0.99795026,0.00023359295,0.000046968762,0.0014037857],"study_design_scores_gemma":[0.00000484282,0.000040348274,0.002603691,0.0000062982017,0.0000074041427,0.00006579558,0.000012419961,0.0014255134,0.993123,0.00020912287,0.0024963974,0.000005063335],"about_ca_topic_score_codex":0.0003604866,"about_ca_topic_score_gemma":0.0006501522,"teacher_disagreement_score":0.0012594939,"about_ca_system_score_codex":0.00043936938,"about_ca_system_score_gemma":0.00025461067,"threshold_uncertainty_score":0.0042134523},"labels":[],"label_agreement":null},{"id":"W4415237104","doi":"10.3389/fimmu.2025.1654604","title":"What goes up must come down: dynamics of type 1 interferon signaling across the lifespan","year":2025,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nova Scotia Health Authority; Dalhousie University; SNC-Lavalin (Canada)","funders":"Australian Government","keywords":"Interferon; Immune system; Signal transduction; Disease; Stimulator of interferon genes; Context (archaeology); Interferon type I; Mechanism (biology); Innate immune system","score_opus":0.008792005839766526,"score_gpt":0.26329394830048114,"score_spread":0.2545019424607146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415237104","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4285211,0.49973652,0.01504399,0.029619101,0.0022038158,0.000055779194,0.0019519001,0.00031354575,0.02255426],"genre_scores_gemma":[0.7790749,0.20445201,0.004006606,0.0057336343,0.0010494136,0.000068400404,0.00051443017,0.00006381337,0.0050367424],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9997274,0.000066923305,0.000015547284,0.00008500676,0.00005067869,0.000054466982],"domain_scores_gemma":[0.99964166,0.000109457615,0.00007804625,0.000022998704,0.00005858794,0.00008915211],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000716683,0.00019869866,0.0003887498,0.00034125615,0.00038765938,0.0015862363,0.00024096292,0.0006911877,0.0014425644],"category_scores_gemma":[0.0010646675,0.0001316928,0.0002536923,0.0002664136,0.0006256379,0.0018890676,0.00065688376,0.0011281499,0.00037659158],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014404836,0.0001303364,0.061970446,0.0030410849,0.00040343098,0.0017876218,0.007855558,0.0018852026,0.19015086,0.08352419,0.027462479,0.6203482],"study_design_scores_gemma":[0.00005094995,0.001008236,0.29180318,0.0029901417,0.00035243251,0.0038796447,0.009304028,0.0027685587,0.025385939,0.13052021,0.53172433,0.00021230486],"about_ca_topic_score_codex":0.00052985887,"about_ca_topic_score_gemma":0.0007023541,"teacher_disagreement_score":0.0015862363,"about_ca_system_score_codex":0.0005655996,"about_ca_system_score_gemma":0.00047013242,"threshold_uncertainty_score":0.0048258305},"labels":[],"label_agreement":null},{"id":"W4415389104","doi":"10.1101/2025.10.20.683412","title":"Oncogenic EGFR rewires STING-TBK1 immune machinery by tyrosine phosphorylation to license DNA damage tolerance","year":2025,"lang":"","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakehead University","funders":"","keywords":"DNA damage; Innate immune system; TANK-binding kinase 1; Tyrosine kinase; Kinase; Phosphorylation; Janus kinase; Immune system; Signal transduction","score_opus":0.008287410409152042,"score_gpt":0.22677992117264759,"score_spread":0.21849251076349555,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415389104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9828063,0.0030859243,0.0077268085,0.00055786135,0.00018164288,0.000030741558,0.00042889436,0.0003989758,0.0047827624],"genre_scores_gemma":[0.993349,0.00066558924,0.0015186024,0.000064105574,0.000022862845,0.0000112025655,0.00022063915,0.000027385146,0.0041204826],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999913,0.000009762502,0.000005730667,0.000021704176,0.000024059547,0.000025806416],"domain_scores_gemma":[0.99996066,0.0000030881863,0.000012413244,0.000007600666,0.0000040642713,0.000012252864],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001255818,0.00028659494,0.00016037202,0.00012809427,0.00015858343,0.0003160118,0.00013693656,0.0002374652,0.0018277698],"category_scores_gemma":[0.000071338894,0.00008396024,0.00020290278,0.000094094205,0.0002982856,0.000218934,0.00027316037,0.0005847792,0.0007686265],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000076269775,0.000010764254,0.00026781549,0.000032125678,0.0000033248707,0.00007927678,0.000011417375,0.000075893644,0.997083,0.00050225103,0.00017395287,0.0016837765],"study_design_scores_gemma":[0.000013530776,0.00008091413,0.0025286125,0.0000069131383,0.0000070012884,0.00024141572,0.000021070264,0.0014463845,0.9903943,0.00024289466,0.0050139157,0.0000030815704],"about_ca_topic_score_codex":0.00015446584,"about_ca_topic_score_gemma":0.00023247881,"teacher_disagreement_score":0.0018277698,"about_ca_system_score_codex":0.00034494296,"about_ca_system_score_gemma":0.00018440913,"threshold_uncertainty_score":0.0061145425},"labels":[],"label_agreement":null},{"id":"W4415444620","doi":"10.1158/1535-7163.targ-25-c116","title":"Abstract C116: Novel ATR inhibitors with CNS penetrance developed by artificial intelligence","year":2025,"lang":"en","type":"article","venue":"Molecular Cancer Therapeutics","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ovarian Cancer Canada","funders":"","keywords":"Drug discovery; Penetrance; Kinase; Cancer; Synthetic biology; DNA damage; Drug; DNA repair","score_opus":0.026453306694786675,"score_gpt":0.29194081987832765,"score_spread":0.26548751318354097,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415444620","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87121403,0.020100055,0.06865339,0.0013621008,0.00038845834,0.0006252022,0.001187641,0.0012601543,0.035209015],"genre_scores_gemma":[0.95524836,0.005943218,0.028228614,0.00035636342,0.00003253082,0.00016633788,0.0010469509,0.00006378806,0.008913867],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999281,0.000009521067,0.0000045675392,0.000016658823,0.00002735038,0.000013836092],"domain_scores_gemma":[0.9999502,0.000004599011,0.000014179344,0.000003933581,0.000009585691,0.000017527882],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011884609,0.00071129034,0.00047695963,0.00048461827,0.00016122527,0.00057137694,0.00052147696,0.00038349518,0.0013255967],"category_scores_gemma":[0.00016321364,0.00017702309,0.00045386833,0.00035326916,0.00020920619,0.0002728889,0.00040709044,0.001078222,0.0005611575],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00080869906,0.0008773717,0.0009053167,0.0007223929,0.0001322992,0.0007125728,0.00005648697,0.06470615,0.75563717,0.006678758,0.003979805,0.16478284],"study_design_scores_gemma":[0.000961655,0.008448351,0.0019369257,0.00010171102,0.00022247278,0.0013237292,0.000028340834,0.21003565,0.7303363,0.0019017304,0.044585075,0.00011800328],"about_ca_topic_score_codex":0.001207214,"about_ca_topic_score_gemma":0.0016713693,"teacher_disagreement_score":0.0013255967,"about_ca_system_score_codex":0.00054637075,"about_ca_system_score_gemma":0.00033389925,"threshold_uncertainty_score":0.0044345856},"labels":[],"label_agreement":null},{"id":"W4415539193","doi":"10.1016/b978-0-323-82688-4.00120-5","title":"Cowden Syndrome Versus Cronkhite-Canada Syndrome","year":2025,"lang":"en","type":"book-chapter","venue":"Elsevier eBooks","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Cowden syndrome; Hamartoma; Peutz–Jeghers syndrome; Disease; Pathognomonic","score_opus":0.011142772084051088,"score_gpt":0.22126983916730214,"score_spread":0.21012706708325105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415539193","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.014017495,0.2989564,0.0021472776,0.011765314,0.010153256,0.000022841201,0.00015900028,0.000108073946,0.6626703],"genre_scores_gemma":[0.08815209,0.15658851,0.0029639269,0.008862494,0.010123196,0.000043723114,0.00024045077,0.000085023225,0.7329406],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99993825,0.00001346319,0.0000049485534,0.0000086877235,0.000022249122,0.000012323464],"domain_scores_gemma":[0.999931,0.00003702529,0.000007727253,0.0000027028605,0.0000072332164,0.000014293115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013849871,0.00030634878,0.00020737985,0.0004869242,0.00019288149,0.0008201989,0.00025493934,0.0010765581,0.019344],"category_scores_gemma":[0.00029921668,0.00006966685,0.00009107156,0.00040645723,0.00045442482,0.0006578605,0.00034352476,0.0009670818,0.0040413006],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002463129,0.000094266135,0.0024878953,0.00043125573,0.00002306549,0.016305445,0.0002992195,0.0003120295,0.0058939997,0.1100061,0.23889439,0.6250061],"study_design_scores_gemma":[0.000020717807,0.000055712833,0.0026296973,0.00034163953,0.000012735274,0.02816325,0.00021965215,0.00012287668,0.0004613018,0.012198512,0.9557663,0.000007672984],"about_ca_topic_score_codex":0.002326787,"about_ca_topic_score_gemma":0.006054293,"teacher_disagreement_score":0.019344,"about_ca_system_score_codex":0.0004498955,"about_ca_system_score_gemma":0.00029392602,"threshold_uncertainty_score":0.06471211},"labels":[],"label_agreement":null},{"id":"W4415549061","doi":"10.1101/2025.10.24.684275","title":"STING activation reshapes the tumor microenvironment leading to tumor regression in osteosarcoma","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Osteosarcoma Institute","keywords":"Osteosarcoma; Tumor microenvironment; Sting; Immune system; Innate immune system; Immunotherapy; Mechanism (biology); Cancer","score_opus":0.013419185222738644,"score_gpt":0.2363099565923199,"score_spread":0.22289077136958127,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415549061","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934261,0.0018240289,0.0021103767,0.00008583752,0.000030453979,0.000016198064,0.00028046223,0.00010517704,0.0021213822],"genre_scores_gemma":[0.9947238,0.00075722556,0.0009085836,0.00003093116,0.000011716332,0.000012365122,0.00034640715,0.000017744022,0.003191219],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999466,0.0000063547336,0.0000042871548,0.0000098435685,0.000017192539,0.000015698297],"domain_scores_gemma":[0.99996305,0.0000052405544,0.000010113656,0.0000058501264,0.0000032942066,0.000012352244],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000077038116,0.00013626965,0.0001636893,0.00018500404,0.00008315802,0.00020973966,0.000051507304,0.0001143168,0.0014763732],"category_scores_gemma":[0.00006985651,0.00006924606,0.00012319753,0.00011937275,0.00012353115,0.00009149129,0.00011599066,0.00036809876,0.0004138085],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007921844,0.00001062313,0.00025246758,0.000015098123,0.0000014186099,0.00004772376,0.00000931261,0.000060356393,0.9975594,0.00007588096,0.00005484622,0.0018335258],"study_design_scores_gemma":[0.000011980728,0.00020332432,0.008659209,0.0000055837686,0.000008146432,0.00027862657,0.00003332703,0.0010005282,0.98590523,0.00007654037,0.003815521,0.000002099192],"about_ca_topic_score_codex":0.00032968845,"about_ca_topic_score_gemma":0.00059463206,"teacher_disagreement_score":0.0014763732,"about_ca_system_score_codex":0.00014384532,"about_ca_system_score_gemma":0.00015783276,"threshold_uncertainty_score":0.00493896},"labels":[],"label_agreement":null},{"id":"W4415549831","doi":"10.1016/j.radonc.2025.111220","title":"Cytosolic DNA in radiotherapy: relevance, mechanisms, and detection","year":2025,"lang":"en","type":"article","venue":"Radiotherapy and Oncology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; Princess Margaret Cancer Centre","funders":"Temerty Faculty of Medicine, University of Toronto; Canadian Institutes of Health Research; University of Toronto; Ontario Ministry of Health and Long-Term Care; Princess Margaret Hospital Foundation; Princess Margaret Cancer Foundation","keywords":"Cytosol; DNA; Immune system; DNA damage; Innate immune system; Cancer cell; Cytotoxic T cell; Micronucleus test","score_opus":0.007494198430191695,"score_gpt":0.2710642658066842,"score_spread":0.26357006737649247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415549831","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43160534,0.48947906,0.04581017,0.009760955,0.0012032756,0.00016448254,0.00037758195,0.00024496095,0.021354234],"genre_scores_gemma":[0.91284806,0.070762604,0.0059659765,0.0006408355,0.0006151933,0.000070218586,0.00024685377,0.000029335237,0.008820902],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997013,0.00009987996,0.000016164282,0.00004706859,0.00007456347,0.000060936032],"domain_scores_gemma":[0.9995459,0.00015509239,0.0001273108,0.000036540998,0.00006923691,0.00006595664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00073350716,0.00046711604,0.00045004115,0.00095938036,0.00045431894,0.0013906196,0.0005651545,0.0015323733,0.0022912943],"category_scores_gemma":[0.0007166639,0.00024486467,0.00025726264,0.00058377313,0.0013741048,0.0013729224,0.0006219729,0.0011544307,0.000596154],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016741347,0.0002515279,0.008776513,0.0027428588,0.000049572733,0.0015192687,0.00083811145,0.0012470746,0.7834699,0.045623206,0.0025988836,0.15120885],"study_design_scores_gemma":[0.00017844967,0.002806579,0.031484243,0.0010113979,0.00016351305,0.011770835,0.0023943547,0.0055298186,0.76349473,0.029439958,0.15161721,0.00010882411],"about_ca_topic_score_codex":0.0004462284,"about_ca_topic_score_gemma":0.00045888795,"teacher_disagreement_score":0.0022912943,"about_ca_system_score_codex":0.0013288972,"about_ca_system_score_gemma":0.0007731042,"threshold_uncertainty_score":0.009641886},"labels":[],"label_agreement":null},{"id":"W4415823565","doi":"10.1073/pnas.2409557122","title":"cGAS-agonistic spherical nucleic acids reprogram the glioblastoma immune microenvironment and promote antitumor immunity","year":2025,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Institute for Nanotechnology","funders":"National Institute of Neurological Disorders and Stroke; National Cancer Institute; National Institutes of Health","keywords":"Proinflammatory cytokine; Immune system; Stimulator of interferon genes; Tumor microenvironment; Chemokine; Immunotherapy; Innate immune system; Oligonucleotide; Acquired immune system","score_opus":0.01490966388142739,"score_gpt":0.27611143168160457,"score_spread":0.2612017678001772,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415823565","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948826,0.0008846326,0.0022962939,0.00007600289,0.000025486104,0.00003715385,0.00010888001,0.00010053491,0.00158839],"genre_scores_gemma":[0.99711084,0.0003793811,0.0014875109,0.00004569801,0.0000053746776,0.000020158164,0.00010190135,0.0000073611322,0.0008416279],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99995184,0.0000062900226,0.0000032696441,0.000008426715,0.000013569019,0.00001661888],"domain_scores_gemma":[0.99997795,0.000002466093,0.0000067309993,0.0000023220819,0.0000028924442,0.000007770485],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005751399,0.0002358957,0.0001192226,0.00013597707,0.000047536905,0.00012168151,0.00006610016,0.00014633733,0.00047069765],"category_scores_gemma":[0.000038635528,0.00006329767,0.00012100313,0.000055909924,0.00010193003,0.00009902687,0.000110848545,0.0002046054,0.00013449835],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051034604,0.000020486068,0.000068381974,0.000015695714,0.000002008465,0.000014831109,0.000007053143,0.00008639314,0.9976743,0.00008131495,0.00004274772,0.0019356923],"study_design_scores_gemma":[0.000018537372,0.0004845956,0.0014140393,0.0000029337123,0.0000073719484,0.000083912586,0.000013412768,0.001026849,0.9950453,0.00004215987,0.0018581392,0.000002734716],"about_ca_topic_score_codex":0.00035649724,"about_ca_topic_score_gemma":0.0007834966,"teacher_disagreement_score":0.00047069765,"about_ca_system_score_codex":0.0001711495,"about_ca_system_score_gemma":0.00014195323,"threshold_uncertainty_score":0.0015746355},"labels":[],"label_agreement":null},{"id":"W4415828933","doi":"10.1101/2025.11.01.685890","title":"Differential Control of HIV-1 Replication by IFN-α14 Compared to IFN-α2 Relates to Differences in the Modulation of Host Antiretroviral Restriction Factors","year":2025,"lang":"","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"APOBEC3G; ISG15; Lentivirus; Viral replication; Gene; SAMHD1; Cytidine deaminase; Endogeny; Effector","score_opus":0.013840519119850405,"score_gpt":0.23125378858025136,"score_spread":0.21741326946040096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415828933","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969158,0.00056305196,0.001365167,0.000026000145,0.00001976073,0.00001685647,0.0002237849,0.00002126097,0.00084835745],"genre_scores_gemma":[0.9972146,0.00016849842,0.0012654647,0.00003736923,0.0000043168266,0.000015826192,0.00023696505,0.00001510696,0.0010419504],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998068,0.00003202493,0.000028393197,0.000049296545,0.000041121806,0.00004234966],"domain_scores_gemma":[0.9998683,0.00002665932,0.0000374205,0.000018751272,0.000018238356,0.000030616757],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018470616,0.00021441434,0.0002554561,0.0001847865,0.00013613833,0.0004187039,0.00015960664,0.00022215312,0.0012581678],"category_scores_gemma":[0.000121005774,0.00013373334,0.00029651774,0.00010466547,0.0002488391,0.00015773077,0.00019585724,0.00048435645,0.00024873496],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007152935,0.00000857392,0.00019830323,0.0000063593093,0.000002022761,0.000008385216,0.0000033087767,0.000016350208,0.99936014,0.00003360214,0.0000039310985,0.0002876034],"study_design_scores_gemma":[0.000011977755,0.00012910686,0.005908641,0.0000048018446,0.000008273156,0.00014132795,0.0000140994425,0.00042795175,0.99268097,0.000036471178,0.0006339729,0.0000023771263],"about_ca_topic_score_codex":0.0004155839,"about_ca_topic_score_gemma":0.00035107878,"teacher_disagreement_score":0.0012581678,"about_ca_system_score_codex":0.00038713313,"about_ca_system_score_gemma":0.00017415067,"threshold_uncertainty_score":0.004208982},"labels":[],"label_agreement":null},{"id":"W4416094229","doi":"10.1002/adfm.202520463","title":"A Single‐Metal‐Doped Nanoplatform for Ferroptosis‐Driven cGAS‐STING Pathway Activation in Hepatocellular Carcinoma Immunotherapy","year":2025,"lang":"en","type":"article","venue":"Advanced Functional Materials","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; University of Manitoba","funders":"","keywords":"Tumor microenvironment; Immune system; Hepatocellular carcinoma; Immunotherapy; Innate immune system; Reactive oxygen species; Signal transduction","score_opus":0.021268015386619373,"score_gpt":0.24335192475646042,"score_spread":0.22208390936984104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416094229","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876302,0.00081811484,0.009062125,0.00010841109,0.000049098035,0.00004207242,0.00014964212,0.00016922217,0.0019711228],"genre_scores_gemma":[0.9935241,0.00016061192,0.0051649655,0.000033646607,0.000006606865,0.000021552174,0.000048457165,0.0000093915205,0.0010307045],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999961,0.000004422131,0.000002645475,0.000011129392,0.000011631468,0.000009117497],"domain_scores_gemma":[0.99996006,0.0000068000113,0.000015856223,0.0000036633423,0.000006175194,0.0000074342],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000072800096,0.0001839078,0.000083938074,0.00013568952,0.00009011594,0.00010475983,0.00015012658,0.0003030731,0.0007203409],"category_scores_gemma":[0.00007052867,0.00008157212,0.00009774112,0.00006782417,0.0001239427,0.00015587872,0.00012233546,0.00017574441,0.00015853444],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003096167,0.000009067001,0.000039930474,0.000022362383,0.0000016942222,0.000017402906,0.000005331308,0.00014860708,0.9982206,0.00008420782,0.00004764453,0.0013721507],"study_design_scores_gemma":[0.0000050042945,0.000091128895,0.00023113456,0.0000017185702,0.000002667214,0.0000415391,0.0000037643135,0.0016707564,0.9971597,0.000015440472,0.00077472674,0.000002574271],"about_ca_topic_score_codex":0.00034161992,"about_ca_topic_score_gemma":0.00060567266,"teacher_disagreement_score":0.0007203409,"about_ca_system_score_codex":0.00024121784,"about_ca_system_score_gemma":0.000092578055,"threshold_uncertainty_score":0.0024098158},"labels":[],"label_agreement":null},{"id":"W4416141431","doi":"10.1093/neuonc/noaf201.0593","title":"DNAR-02. Nuclear potassium governs nuclear integrity and tumour growth in medulloblastoma","year":2025,"lang":"en","type":"article","venue":"Neuro-Oncology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"","keywords":"Medulloblastoma; Potassium channel; Nuclear pore; Potassium; Cytoplasm; Immune system; Cell nucleus; Nuclear DNA","score_opus":0.009771844142138776,"score_gpt":0.25743455742530286,"score_spread":0.24766271328316408,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416141431","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950848,0.0009996307,0.0018052142,0.00011076479,0.000017312701,0.000020542762,0.00048433372,0.00011639078,0.0013609531],"genre_scores_gemma":[0.997614,0.00018727429,0.00061019853,0.000025191533,0.0000021324115,0.000010279547,0.00029719464,0.000013315313,0.0012403913],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998367,0.000018779887,0.000015080941,0.00003308362,0.00006153772,0.000034783934],"domain_scores_gemma":[0.99983215,0.000012228246,0.00008046511,0.0000138654605,0.000013809007,0.000047501682],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014627317,0.00019000581,0.00019176179,0.000214053,0.00013548137,0.00028876608,0.00015612075,0.00020980767,0.0012051597],"category_scores_gemma":[0.00013427474,0.00008769128,0.00014230696,0.00010200431,0.0002564701,0.00016417215,0.00016811409,0.0004025071,0.00040061394],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000110965055,0.0000144911255,0.0009341352,0.00002093741,0.0000032623245,0.00004158317,0.000009228723,0.000048986018,0.9978522,0.00008553577,0.000036408353,0.00084227615],"study_design_scores_gemma":[0.000031140095,0.00045197504,0.026854906,0.000011732052,0.000024684072,0.00075916987,0.000086839806,0.0018032476,0.9664659,0.000116064395,0.003386485,0.000007885547],"about_ca_topic_score_codex":0.0010403869,"about_ca_topic_score_gemma":0.0019537366,"teacher_disagreement_score":0.0012051597,"about_ca_system_score_codex":0.00060992024,"about_ca_system_score_gemma":0.000251165,"threshold_uncertainty_score":0.0044252872},"labels":[],"label_agreement":null},{"id":"W4416145030","doi":"10.1139/bcb-2025-0034","title":"TRIM46 promotes chemoresistance of ovarian cancer via activating PHLPP2/PI3K/AKT pathway","year":2025,"lang":"en","type":"article","venue":"Biochemistry and Cell Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Education Department of Jiangxi Province","keywords":"Ovarian cancer; Downregulation and upregulation; Pleckstrin homology domain; Cisplatin; Malignancy; Cancer; Phosphatase","score_opus":0.00639537105764241,"score_gpt":0.23490452817477683,"score_spread":0.22850915711713443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416145030","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98214334,0.0105295805,0.002321548,0.00045629253,0.000092703565,0.000044559943,0.00056087616,0.00016050648,0.003690586],"genre_scores_gemma":[0.99563247,0.0016384952,0.00057175907,0.00013128981,0.00001949856,0.000018937371,0.00032963377,0.000005949874,0.0016518697],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999125,0.000017900908,0.0000071402433,0.000014210528,0.000021129992,0.000027098995],"domain_scores_gemma":[0.9999485,0.000004107583,0.00001536357,0.000005704691,0.000007401516,0.00001886251],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010865285,0.0001570108,0.00014793323,0.00018820111,0.00016990058,0.00023689351,0.00008055638,0.0001820032,0.0019329617],"category_scores_gemma":[0.000092466886,0.000071893235,0.00020124542,0.00010921357,0.00012378891,0.00017704403,0.00016748019,0.000489816,0.00029369662],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00055998756,0.000090093425,0.0032403832,0.00026857582,0.000030440782,0.00030427155,0.000037948677,0.00019064377,0.9840343,0.00024602673,0.0007838815,0.010213519],"study_design_scores_gemma":[0.00008742486,0.00080358837,0.054730114,0.000037357484,0.00008563324,0.0015464067,0.00015844326,0.0027672765,0.92381,0.00027616002,0.01568524,0.000012220431],"about_ca_topic_score_codex":0.00024482407,"about_ca_topic_score_gemma":0.0004420166,"teacher_disagreement_score":0.0019329617,"about_ca_system_score_codex":0.00018194124,"about_ca_system_score_gemma":0.00015419656,"threshold_uncertainty_score":0.006466329},"labels":[],"label_agreement":null},{"id":"W4416183002","doi":"10.1126/science.aea8769","title":"Recurrent acquisition of nuclease-protease pairs in antiviral immunity","year":2025,"lang":"en","type":"article","venue":"Science","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; National Institutes of Health; Shurl and Kay Curci Foundation; U.S. Department of Energy; Howard Hughes Medical Institute","keywords":"Immune system; Proteases; Gene; Protease; Nuclease; Mechanism (biology); Immunity","score_opus":0.010949983373299462,"score_gpt":0.27750028304112007,"score_spread":0.2665502996678206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416183002","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966544,0.00039034174,0.0022642107,0.000030191923,0.0000032002158,0.0000045802212,0.000031733874,0.000022315266,0.0005990988],"genre_scores_gemma":[0.9975182,0.00009110177,0.0019452912,0.000018612884,0.0000034340028,0.0000038389785,0.000082689265,0.000004959553,0.00033193317],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99964607,0.0000473563,0.000027515676,0.00011459291,0.00009214836,0.000072363466],"domain_scores_gemma":[0.9996123,0.00009242361,0.000119256736,0.00006813799,0.00003962698,0.000068190115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003458236,0.00018203254,0.0003434393,0.00046976798,0.0002085398,0.0005771943,0.00021617995,0.0004660935,0.0005415195],"category_scores_gemma":[0.0004411043,0.00018367369,0.00023158571,0.00033355053,0.00037104235,0.00050596776,0.0006092071,0.0005112277,0.00025097805],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000065705535,0.000014752503,0.0070632845,0.000014073875,0.0000071582413,0.00020412334,0.000033626126,0.000085720705,0.98716843,0.0003316198,0.000010935749,0.005000522],"study_design_scores_gemma":[0.000020964331,0.00050670444,0.14023791,0.000014528272,0.00005357072,0.008631017,0.00025274372,0.0031330297,0.8422097,0.0015369006,0.0033799761,0.000022949227],"about_ca_topic_score_codex":0.0001081512,"about_ca_topic_score_gemma":0.00019837722,"teacher_disagreement_score":0.0005771943,"about_ca_system_score_codex":0.00038559485,"about_ca_system_score_gemma":0.00019207067,"threshold_uncertainty_score":0.0027977228},"labels":[],"label_agreement":null},{"id":"W4416300386","doi":"10.1101/2025.11.17.687821","title":"Systematic Discovery of Pathogen Effector Functions across Human Pathogens and Pathways","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; University of Toronto","funders":"","keywords":"Effector; Functional genomics; ORFS; Genetic screen; Function (biology); Pathogen; Model organism; Open reading frame","score_opus":0.012113957683688203,"score_gpt":0.23134498011530896,"score_spread":0.21923102243162076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416300386","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9211321,0.0068860888,0.053655352,0.0007321774,0.00005718467,0.00008999947,0.012032459,0.0014704514,0.0039441376],"genre_scores_gemma":[0.8869695,0.0029508448,0.092111275,0.00036837594,0.000034906363,0.00006002863,0.01573967,0.0002454594,0.0015199617],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9996927,0.000051314895,0.000021363952,0.00011460667,0.0000794479,0.000040592222],"domain_scores_gemma":[0.9997104,0.00011922705,0.000053375872,0.000056260254,0.000031362382,0.000029315086],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006421584,0.00036068028,0.0005327394,0.00061121304,0.00023147842,0.0006604396,0.0002712958,0.0002872698,0.0011825394],"category_scores_gemma":[0.00046734902,0.00015126966,0.00046466303,0.0004584772,0.00025059283,0.00033441948,0.00049510703,0.0005818717,0.0005176949],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005902816,0.00005943234,0.011159407,0.00049488404,0.000084658706,0.00031614123,0.00010924424,0.0017491651,0.92115444,0.0019176132,0.0011884009,0.06117634],"study_design_scores_gemma":[0.00006244357,0.00044681324,0.058453523,0.00020249862,0.00026763132,0.001843126,0.0002443825,0.013860268,0.86261356,0.006369068,0.055581186,0.000055547993],"about_ca_topic_score_codex":0.00034314656,"about_ca_topic_score_gemma":0.0005397836,"teacher_disagreement_score":0.0011825394,"about_ca_system_score_codex":0.00029213415,"about_ca_system_score_gemma":0.0005660124,"threshold_uncertainty_score":0.0039559603},"labels":[],"label_agreement":null},{"id":"W4416391814","doi":"10.1093/jleuko/qiaf167","title":"Differential roles for Irgm1 in myeloid cells for immune resistance to pathogenic bacteria","year":2025,"lang":"en","type":"article","venue":"Journal of Leukocyte Biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital","funders":"National Institute of Environmental Health Sciences; National Institute of Allergy and Infectious Diseases; National Institutes of Health; CH.I.L.D. Foundation","keywords":"Immune system; Myeloid; Haematopoiesis; Macrophage; Intracellular parasite; Myeloid cells; Listeria monocytogenes; Extracellular","score_opus":0.009751830641655137,"score_gpt":0.27285919090622723,"score_spread":0.2631073602645721,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416391814","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99657094,0.0011119236,0.0012001082,0.000084246756,0.000008680344,0.000010397457,0.00022013126,0.00004057637,0.00075299933],"genre_scores_gemma":[0.9966889,0.00034119436,0.0013991476,0.00005431159,0.0000046132277,0.000020428863,0.0003210154,0.00001201511,0.0011582838],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983764,0.000023428762,0.0000130294175,0.00004180203,0.000034567034,0.000049494694],"domain_scores_gemma":[0.9998474,0.000012779468,0.000055875407,0.000020700814,0.000012422709,0.0000507689],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001972847,0.00032350927,0.00019741885,0.00035369105,0.00012605307,0.000259667,0.00017962043,0.0003830653,0.0012770724],"category_scores_gemma":[0.00013928725,0.00011853305,0.00018277587,0.00013058975,0.00032487785,0.0002509302,0.0003611811,0.0005660456,0.00036612697],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000095304735,0.0000059879285,0.000826344,0.000018180746,0.0000016681578,0.00004449904,0.000016028058,0.000019601986,0.99818254,0.00010035792,0.000015359885,0.00067416386],"study_design_scores_gemma":[0.00005064174,0.00038319195,0.10488571,0.000053792148,0.000051405394,0.0019315946,0.00023898219,0.00076001487,0.8858929,0.00029680497,0.005442362,0.000012533419],"about_ca_topic_score_codex":0.00011825633,"about_ca_topic_score_gemma":0.0002576738,"teacher_disagreement_score":0.0012770724,"about_ca_system_score_codex":0.00020285869,"about_ca_system_score_gemma":0.00012597711,"threshold_uncertainty_score":0.004272163},"labels":[],"label_agreement":null},{"id":"W4416410612","doi":"10.1038/s41467-025-65023-4","title":"An inherited mitochondrial DNA mutation remodels inflammatory cytokine responses in macrophages and in vivo in mice","year":2025,"lang":"en","type":"article","venue":"Nature Communications","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"Cambridge Institute for Medical Research, University of Cambridge; Medical Research Council; Wellcome Trust; UK Research and Innovation; Leona M. and Harry B. Helmsley Charitable Trust","keywords":"Mitochondrial DNA; Heteroplasmy; Lipopolysaccharide; Innate immune system; Mutation; Cytokine; Immune system; Macrophage; Mitochondrion","score_opus":0.010681909081475767,"score_gpt":0.3008685715835612,"score_spread":0.2901866625020854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416410612","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99654776,0.0005243122,0.0013033476,0.00016527098,0.00003822174,0.000031765117,0.0005568857,0.00006958895,0.00076282106],"genre_scores_gemma":[0.99612695,0.00028607348,0.001024942,0.00012612774,0.000015326808,0.000047177797,0.000314145,0.00002635122,0.0020329196],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99958605,0.000087633736,0.000044016455,0.000099740806,0.00007691644,0.00010581711],"domain_scores_gemma":[0.9997069,0.000028868923,0.000114360024,0.000032998032,0.00001626521,0.00010062387],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031629513,0.0004901252,0.0002646642,0.0006194654,0.00018715765,0.00034934568,0.00020041874,0.00078171346,0.0012065121],"category_scores_gemma":[0.00014107344,0.00030288618,0.00030529246,0.00015616004,0.0004838998,0.00022740214,0.00025871486,0.00085823017,0.0005600242],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036849154,0.00006877756,0.0006470365,0.000017955801,0.000004702689,0.00013043897,0.000024809511,0.000047593687,0.9979802,0.000059860613,0.000033218144,0.00061706244],"study_design_scores_gemma":[0.0001426809,0.002591666,0.027239429,0.00003917059,0.000054289805,0.0014757015,0.00028695326,0.0016677222,0.9639555,0.0003503153,0.0021773854,0.000019248058],"about_ca_topic_score_codex":0.0002855476,"about_ca_topic_score_gemma":0.0004732368,"teacher_disagreement_score":0.0012065121,"about_ca_system_score_codex":0.00027916726,"about_ca_system_score_gemma":0.00012969476,"threshold_uncertainty_score":0.004036188},"labels":[],"label_agreement":null},{"id":"W4416446722","doi":"10.1093/jimmun/vkaf283.1455","title":"STING agonist enhances type I interferon-driven GITRL co-stimulatory functions in monocytic lineage cells for durable and effective anti-tumor CD8+ T cell responses 3684","year":2025,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; University of Toronto","keywords":"Sting; Agonist; Stimulator of interferon genes; T cell; Downregulation and upregulation; Effector; Receptor; T-cell receptor","score_opus":0.011091284031902541,"score_gpt":0.274170386884604,"score_spread":0.2630791028527015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416446722","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952165,0.000847797,0.0012890921,0.00011481762,0.00004219271,0.000048710823,0.00067289476,0.00009465497,0.0016734402],"genre_scores_gemma":[0.99115574,0.0004633199,0.002880903,0.00009060345,0.00001959364,0.00007047985,0.0008117671,0.000020763033,0.0044867727],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997634,0.000038639446,0.000027447197,0.000037583624,0.00005284711,0.000080113816],"domain_scores_gemma":[0.9999089,0.00000898952,0.000021403326,0.000012095383,0.00000742366,0.000041090487],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014020283,0.00040023107,0.00029920586,0.00018570392,0.00016813382,0.00031048822,0.00016455032,0.00023765182,0.0024210636],"category_scores_gemma":[0.000056144043,0.00013817936,0.00023404743,0.00014878485,0.0001891324,0.00015819063,0.00018607348,0.0010818647,0.0009187375],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013284525,0.0000356392,0.000059525155,0.000016480099,0.0000013697243,0.00002342263,0.0000086300515,0.000030185507,0.999188,0.0000414839,0.000042735363,0.0004197839],"study_design_scores_gemma":[0.000037823684,0.0006237921,0.0018467532,0.00000567078,0.000010093922,0.00009450669,0.000025070169,0.00083642616,0.99465203,0.000017463519,0.0018471372,0.0000032347573],"about_ca_topic_score_codex":0.0006182922,"about_ca_topic_score_gemma":0.0015318795,"teacher_disagreement_score":0.0024210636,"about_ca_system_score_codex":0.0003087634,"about_ca_system_score_gemma":0.00028383653,"threshold_uncertainty_score":0.008099198},"labels":[],"label_agreement":null},{"id":"W4416447989","doi":"10.1093/jimmun/vkaf283.2715","title":"Inhibition of cGAS as a novel treatment for acute myeloid leukemia 9292","year":2025,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Myeloid leukemia; Haematopoiesis; Cytarabine; Leukemia; Myeloid; Immune system; Interferon; Innate immune system","score_opus":0.013757085697771973,"score_gpt":0.283211156703487,"score_spread":0.26945407100571506,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416447989","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7403632,0.21609117,0.010010598,0.0025281156,0.0014976091,0.0006346575,0.0017257227,0.0009350474,0.026213948],"genre_scores_gemma":[0.93195367,0.047728214,0.003986003,0.00085247785,0.00021172067,0.00023206488,0.0016177258,0.000032392672,0.013385708],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999571,0.000007132231,0.000004035976,0.0000074525633,0.000014096199,0.000010186465],"domain_scores_gemma":[0.9999839,0.0000015106734,0.0000039052497,0.0000015850275,0.000003332249,0.0000056907925],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000629901,0.00027472668,0.00032692132,0.00035666622,0.00011804644,0.00027733468,0.00027434007,0.00028218926,0.0031317929],"category_scores_gemma":[0.000057669742,0.000058781152,0.00029143563,0.00024744772,0.0001300358,0.00016800208,0.00018017465,0.00085255934,0.00066067785],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003738491,0.0017744848,0.001047003,0.0018217093,0.0001825754,0.000732174,0.00006753306,0.00085405004,0.60629624,0.0024798955,0.008047549,0.3729583],"study_design_scores_gemma":[0.003227271,0.018958785,0.017740974,0.00035425322,0.0005687053,0.0042426386,0.00012423295,0.004325424,0.6299587,0.0014384582,0.31898636,0.000074156356],"about_ca_topic_score_codex":0.0003624646,"about_ca_topic_score_gemma":0.00071323913,"teacher_disagreement_score":0.0031317929,"about_ca_system_score_codex":0.00016162655,"about_ca_system_score_gemma":0.00014308363,"threshold_uncertainty_score":0.010476947},"labels":[],"label_agreement":null},{"id":"W4416448857","doi":"10.1093/jimmun/vkaf283.1991","title":"Dysregulated glucose metabolism drives hyperinflammation and immune-mediated pathology during viral infection 4291","year":2025,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University","funders":"","keywords":"Immune system; Cytokine storm; Cytokine; Inflammation; Immunopathology; Viral load; Chemokine; Viral pathogenesis","score_opus":0.0037035992541516838,"score_gpt":0.21470230806274598,"score_spread":0.2109987088085943,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416448857","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99363285,0.0024365082,0.0013367207,0.00018406255,0.000045420937,0.000028592722,0.00049033447,0.000039756847,0.0018058021],"genre_scores_gemma":[0.9942001,0.0013898542,0.0011063085,0.00009496932,0.000025125615,0.000038627866,0.00045903938,0.000014637845,0.0026712967],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998661,0.000017446295,0.00001053214,0.00002581099,0.000036714533,0.00004335793],"domain_scores_gemma":[0.9998735,0.000008455008,0.000044388664,0.000009380438,0.000017946139,0.000046238674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014163807,0.00022537229,0.00025170317,0.00029450527,0.00016902544,0.00044435752,0.00016509047,0.00028749995,0.0017250839],"category_scores_gemma":[0.000077502256,0.00012326216,0.00015457047,0.00017239132,0.00026376615,0.00016532803,0.0002471431,0.000528907,0.0004339799],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031190188,0.000037843984,0.002090721,0.000036742982,0.00000550847,0.00013833978,0.00001653759,0.00003748729,0.9957099,0.00011170558,0.00011161059,0.0013917922],"study_design_scores_gemma":[0.00007101853,0.0011267368,0.2844715,0.00007200522,0.000055749882,0.0021245065,0.00036871363,0.0018060612,0.7048617,0.0005659853,0.004455689,0.0000203673],"about_ca_topic_score_codex":0.0009228873,"about_ca_topic_score_gemma":0.0012862115,"teacher_disagreement_score":0.0017250839,"about_ca_system_score_codex":0.0004313773,"about_ca_system_score_gemma":0.0002805355,"threshold_uncertainty_score":0.0057709813},"labels":[],"label_agreement":null},{"id":"W4416468017","doi":"10.1007/s00018-025-05911-6","title":"Correction: VZV IE4 downregulates cellular surface MHC-I via sequestering it to the golgi complex","year":2025,"lang":"en","type":"erratum","venue":"Cellular and Molecular Life Sciences","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Golgi apparatus; Surface (topology); Cell; Secretory pathway; Process (computing)","score_opus":0.017671614078283427,"score_gpt":0.2571948290651532,"score_spread":0.23952321498686974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416468017","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00024675252,0.0012778635,0.00058418215,0.03230637,0.96276665,0.000013913765,0.0005221278,0.00020894795,0.002073224],"genre_scores_gemma":[0.025895549,0.012770232,0.006393119,0.08431155,0.51098156,0.00015896781,0.002210328,0.0016889903,0.35558978],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99820864,0.00024121435,0.00028618236,0.0002593787,0.000824461,0.00018018905],"domain_scores_gemma":[0.98956925,0.0026346855,0.0006527339,0.00067000743,0.005783572,0.0006897071],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020972965,0.0020969023,0.001604403,0.0026410576,0.0020531486,0.0026897206,0.0027096404,0.0065159947,0.031707995],"category_scores_gemma":[0.026808467,0.0009013343,0.0012837487,0.0013338825,0.0020124288,0.0018078447,0.001333744,0.009863664,0.022368424],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000079339705,0.000010055265,0.000082451006,0.00019078438,0.000022134172,0.0010775628,0.000028941311,0.00007021772,0.00021591422,0.0008103713,0.9904186,0.00699369],"study_design_scores_gemma":[0.00006283917,0.000024251576,0.0007414825,0.00025082077,0.00007612762,0.002037824,0.00007029075,0.0003393194,0.0013392904,0.0014686898,0.9935489,0.000040259853],"about_ca_topic_score_codex":0.010989576,"about_ca_topic_score_gemma":0.010679275,"teacher_disagreement_score":0.031707995,"about_ca_system_score_codex":0.0032093846,"about_ca_system_score_gemma":0.0024504904,"threshold_uncertainty_score":0.10607386},"labels":[],"label_agreement":null},{"id":"W4416623001","doi":"10.5256/f1000research.28014.r73886","title":"Referee report. For: A proposed molecular mechanism for pathogenesis of severe RNA-viral pulmonary infections [version 1; peer review: 3 approved, 1 approved with reservations]","year":2020,"lang":"en","type":"article","venue":"Faculty of 1000 Research Ltd","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canada Research Chairs; Compute Canada","keywords":"Pathogenesis; Mechanism (biology); Disease; Pulmonary disease","score_opus":0.052293601988424435,"score_gpt":0.3362769552658781,"score_spread":0.28398335327745367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416623001","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006399721,0.004277038,0.0026366054,0.32712162,0.57840633,0.0008656378,0.010109537,0.0022845713,0.07365866],"genre_scores_gemma":[0.008343002,0.004421431,0.0035704344,0.12666698,0.121714875,0.0008015374,0.005590012,0.0011722314,0.7277195],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965138,0.00042479995,0.00049249514,0.00041708883,0.001854898,0.0002970351],"domain_scores_gemma":[0.94202316,0.010125431,0.0013377423,0.002365863,0.04225139,0.001896472],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0036855636,0.00095278746,0.0012747421,0.0031040688,0.0031646912,0.0030057915,0.0027111084,0.009249144,0.32226035],"category_scores_gemma":[0.06229578,0.0005121222,0.001560572,0.0022349886,0.00079001207,0.002070214,0.0019482754,0.0049459203,0.20444898],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000103895745,0.0000074343616,0.000050133895,0.000050910476,0.0000026294447,0.00009237459,0.000017328754,0.000008983233,0.00011104546,0.0002879976,0.99602157,0.0033392874],"study_design_scores_gemma":[0.000026280455,0.000017249844,0.0013039475,0.00015209345,0.000013386846,0.00027235757,0.00011704628,0.00011129273,0.00035385892,0.0014322284,0.996152,0.000048183523],"about_ca_topic_score_codex":0.0290088,"about_ca_topic_score_gemma":0.037472706,"teacher_disagreement_score":0.32226035,"about_ca_system_score_codex":0.0034094027,"about_ca_system_score_gemma":0.0038648392,"threshold_uncertainty_score":0.96671337},"labels":[],"label_agreement":null},{"id":"W4417006583","doi":"10.1182/blood-2025-5703","title":"Zip-code drug conjugates (ZDCs): Ctdna-guided therapy shows strong efficacy and low toxicity in vitro and In Vivo","year":2025,"lang":"en","type":"article","venue":"Blood","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Cancer Research; University of Calgary","funders":"","keywords":"In vivo; In vitro; Drug; In vitro toxicology; Conjugate; Cytokine","score_opus":0.01084755981043633,"score_gpt":0.25677914161589854,"score_spread":0.2459315818054622,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417006583","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9842843,0.0022944876,0.00979686,0.00010308354,0.000044588272,0.00014297027,0.00061640353,0.00029176672,0.0024255866],"genre_scores_gemma":[0.99100167,0.00065640366,0.005183017,0.000045886653,0.00000900331,0.00006039118,0.0006157286,0.000029878214,0.002398083],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998202,0.000036385612,0.0000134874945,0.000044691267,0.00006004217,0.000025232102],"domain_scores_gemma":[0.9999013,0.000016338541,0.0000365542,0.000010655993,0.000016702792,0.000018433024],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015111698,0.00043230536,0.00024076864,0.00025455776,0.00009097062,0.000244346,0.00017547281,0.00037609861,0.0009175945],"category_scores_gemma":[0.00012616502,0.00011417811,0.00017242681,0.00019831237,0.00016926527,0.00014125032,0.00014626564,0.00038632,0.00044432338],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013517016,0.000057115732,0.00012050166,0.00004727417,0.000007743003,0.00002424108,0.0000066906146,0.00026402817,0.99617517,0.000057220357,0.00009248166,0.003012315],"study_design_scores_gemma":[0.0000144759815,0.00047985459,0.00039255753,0.0000015031385,0.000006155196,0.00006398472,0.0000019021613,0.00047474538,0.9977223,0.000006414984,0.0008336948,0.0000022737054],"about_ca_topic_score_codex":0.0003364344,"about_ca_topic_score_gemma":0.00036245026,"teacher_disagreement_score":0.0009175945,"about_ca_system_score_codex":0.0002481513,"about_ca_system_score_gemma":0.00013525176,"threshold_uncertainty_score":0.0030696392},"labels":[],"label_agreement":null},{"id":"W4417071864","doi":"10.1080/2162402x.2025.2590245","title":"Deubiquitinating enzyme JOSD2 modulates cGAS to facilitate immune evasion in colorectal cancer","year":2025,"lang":"en","type":"article","venue":"OncoImmunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Artificial Intelligence in Medicine (Canada)","funders":"National Natural Science Foundation of China","keywords":"Deubiquitinating enzyme; Evasion (ethics); Colorectal cancer; Immune system; Microsatellite instability; Immunotherapy; Immunosuppression; Cancer","score_opus":0.020903676722866197,"score_gpt":0.28467255722174806,"score_spread":0.26376888049888186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417071864","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99330115,0.0028410824,0.002320957,0.00011821179,0.000022664348,0.0000126797895,0.00031186867,0.00006559973,0.0010057819],"genre_scores_gemma":[0.99788994,0.00057583733,0.0007005785,0.00004807038,0.000004028063,0.000005510311,0.0002590349,0.000005761938,0.0005111966],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993,0.000011032651,0.000006469218,0.000017805924,0.000017357772,0.000017282271],"domain_scores_gemma":[0.9999552,0.0000061843925,0.000018179022,0.0000038204125,0.0000047514345,0.000011868775],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014428476,0.0002102805,0.00019657098,0.00016743597,0.0001158579,0.00026258433,0.000104588355,0.00013995855,0.00073504413],"category_scores_gemma":[0.00010264666,0.00007451621,0.00018989116,0.00011766715,0.00017081593,0.00013152903,0.00014359494,0.00023057265,0.00016507646],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003115,0.000036124893,0.003743974,0.000095650685,0.000024711937,0.00011753426,0.000013646239,0.00042831578,0.99028647,0.00019330723,0.00012129191,0.004627443],"study_design_scores_gemma":[0.000040534014,0.00034947088,0.030246252,0.000015814268,0.000045308232,0.0008046013,0.00007044847,0.006048531,0.9546909,0.00018928168,0.007487556,0.00001134113],"about_ca_topic_score_codex":0.00019343106,"about_ca_topic_score_gemma":0.0004910336,"teacher_disagreement_score":0.00073504413,"about_ca_system_score_codex":0.00025566373,"about_ca_system_score_gemma":0.00012421481,"threshold_uncertainty_score":0.0024589896},"labels":[],"label_agreement":null},{"id":"W4417117208","doi":"10.64898/2025.12.03.691914","title":"Nucleic acid strand length governs mitochondrial reprogramming and mtROS-associated antiviral responses following TLR3 engagement","year":2025,"lang":"","type":"article","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"TLR3; Mitochondrial ROS; Mitochondrion; Nucleic acid; Endosome; Interferon; Reactive oxygen species; Innate immune system","score_opus":0.01070598238593714,"score_gpt":0.23673706424499505,"score_spread":0.2260310818590579,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417117208","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983796,0.00036310437,0.0005632009,0.000028773515,0.000008513403,0.000011833698,0.00022392353,0.000012750014,0.00040824956],"genre_scores_gemma":[0.9988181,0.00012262072,0.0002608602,0.000025558118,0.0000035845226,0.000017776101,0.00018701974,0.000004136776,0.0005601616],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987113,0.000022512559,0.000013577464,0.000028946451,0.00002288558,0.00004096623],"domain_scores_gemma":[0.99988246,0.000015770634,0.000048510858,0.0000103166085,0.000016212789,0.000026728281],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001298934,0.00014060394,0.00012066298,0.0000882599,0.00007762711,0.00022126843,0.000079682584,0.00019019557,0.0011031285],"category_scores_gemma":[0.00009828882,0.000067052715,0.00014240008,0.000082111095,0.0001589004,0.00015276935,0.00012910225,0.00033727934,0.00027241267],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000111157955,0.000009745236,0.00014564802,0.000011821529,0.0000014669155,0.000007823858,0.0000063028074,0.000015051858,0.999482,0.000013799051,0.000006822308,0.00018835893],"study_design_scores_gemma":[0.000008563543,0.00028048814,0.009383794,0.0000047337858,0.000007113672,0.00007254921,0.000046477653,0.0005147758,0.9892161,0.000029636116,0.0004321175,0.0000036309666],"about_ca_topic_score_codex":0.00016115379,"about_ca_topic_score_gemma":0.00025899595,"teacher_disagreement_score":0.0011031285,"about_ca_system_score_codex":0.00018222304,"about_ca_system_score_gemma":0.00006669655,"threshold_uncertainty_score":0.003690362},"labels":[],"label_agreement":null},{"id":"W4417133755","doi":"10.1371/journal.pone.0329244","title":"Inflammatory cytokines promote interferon regulatory factor (IRF) transcriptional activity in human pulmonary epithelial cells through the induction of IRF1 by nuclear factor-κB","year":2025,"lang":"en","type":"article","venue":"PLoS ONE","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"IRF1; Interferon regulatory factors; Gene silencing; A549 cell; Transcription factor; IRF3; Proinflammatory cytokine; Regulation of gene expression; IRF8","score_opus":0.026495846970837074,"score_gpt":0.23527066126613497,"score_spread":0.2087748142952979,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417133755","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9720038,0.011008779,0.009826737,0.00032783262,0.0001256981,0.00010934452,0.0022358994,0.00023756102,0.0041243313],"genre_scores_gemma":[0.9824301,0.004265508,0.005980059,0.00019406456,0.0000375411,0.00011382114,0.0023506978,0.000035015255,0.004593101],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996623,0.0000650552,0.000033994926,0.000077542616,0.00008270893,0.00007845569],"domain_scores_gemma":[0.99991035,0.000021559337,0.000023154933,0.000015946389,0.000018849276,0.000010207091],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034683707,0.0003017543,0.00031148025,0.00029426054,0.00021865216,0.00037713622,0.0001074485,0.00026591698,0.0034478698],"category_scores_gemma":[0.00016449462,0.00020641164,0.00047816554,0.00031393263,0.00017552552,0.00019315092,0.00020731897,0.00066629704,0.0011425453],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017146328,0.00003546128,0.00031696638,0.000065903994,0.000005360499,0.000045759683,0.00002906871,0.000026516753,0.9973507,0.000045535486,0.0000801036,0.0018272382],"study_design_scores_gemma":[0.000050472994,0.00046516326,0.014174163,0.00003123955,0.00003231005,0.0005463741,0.00012928431,0.0007331538,0.97523165,0.00011358524,0.008482353,0.000010291576],"about_ca_topic_score_codex":0.00052053144,"about_ca_topic_score_gemma":0.0005266206,"teacher_disagreement_score":0.0034478698,"about_ca_system_score_codex":0.00020765726,"about_ca_system_score_gemma":0.00020333585,"threshold_uncertainty_score":0.011534214},"labels":[],"label_agreement":null},{"id":"W4417437086","doi":"10.1159/000549230","title":"Acknowledgement to Reviewers","year":2025,"lang":"en","type":"article","venue":"Journal of Innate Immunity","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Acknowledgement; Chapel","score_opus":0.012710164563312544,"score_gpt":0.3024095291043305,"score_spread":0.28969936454101797,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417437086","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0004709532,0.015744375,0.0037018775,0.24247198,0.6633103,0.00065253995,0.0029281247,0.0018813442,0.06883854],"genre_scores_gemma":[0.012717485,0.021674633,0.0079818405,0.18760443,0.2698406,0.0018956317,0.005345483,0.004192678,0.48874727],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.96786624,0.0086631095,0.0036831154,0.005082195,0.012564574,0.0021406973],"domain_scores_gemma":[0.7845117,0.023131002,0.009357863,0.0115308305,0.15403533,0.01743322],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.020316312,0.0022516095,0.0022580344,0.0062838458,0.0041899406,0.017754652,0.004984303,0.0068923687,0.28092715],"category_scores_gemma":[0.2024386,0.00090099114,0.0015025601,0.0035099268,0.0025763027,0.010320114,0.007818407,0.00873326,0.18110633],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019885128,0.0000052943205,0.000062944055,0.0001746288,0.0000045615134,0.00005699296,0.00014423586,0.000013943277,0.000042002503,0.0012258283,0.9854624,0.012787124],"study_design_scores_gemma":[0.000007803813,0.0000075395747,0.00009354065,0.00035348313,0.000005798278,0.00014442652,0.00024385171,0.000025959007,0.000048888203,0.0009961193,0.9980598,0.000012783352],"about_ca_topic_score_codex":0.0026273034,"about_ca_topic_score_gemma":0.003615228,"teacher_disagreement_score":0.7190728,"about_ca_system_score_codex":0.0065333387,"about_ca_system_score_gemma":0.018270409,"threshold_uncertainty_score":0.93979496},"labels":[],"label_agreement":null},{"id":"W4417449208","doi":"10.3389/fimmu.2025.1665811","title":"SMAC mimetics sensitize HIV-infected cells to oncolytic virus-mediated death","year":2025,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ottawa Hospital; University of Ottawa","funders":"Ottawa Hospital Research Institute; Canadian Institutes of Health Research; University of Ottawa","keywords":"Oncolytic virus; Programmed cell death; Necroptosis; Apoptosis; Caspase; Tumor necrosis factor alpha; Cancer cell; Interferon; Cell culture","score_opus":0.006300931170182184,"score_gpt":0.23245202182791808,"score_spread":0.2261510906577359,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417449208","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9906894,0.0041500195,0.0023436565,0.00010111174,0.000039124996,0.00005641069,0.00014546516,0.00006908518,0.0024056549],"genre_scores_gemma":[0.9941789,0.0018267191,0.0022669334,0.0000671454,0.000014848132,0.000042610183,0.00017541094,0.000009440145,0.0014180853],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999925,0.000017717111,0.00000816594,0.000010850266,0.000017290444,0.000020929141],"domain_scores_gemma":[0.9999429,0.000019876592,0.000013678868,0.000007999057,0.000005321878,0.000010179523],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013419718,0.00019712035,0.00021429335,0.0001564119,0.00010440023,0.00023133654,0.00011436411,0.0002506392,0.0012323187],"category_scores_gemma":[0.00009374107,0.00008660521,0.00013556007,0.000103210325,0.00013730592,0.0001856324,0.00014898318,0.00049549836,0.00024235668],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012596967,0.000030958465,0.00010272249,0.000042310963,0.0000036869471,0.00003326506,0.000015929427,0.00006580197,0.9977937,0.00010344052,0.000039396957,0.0016428477],"study_design_scores_gemma":[0.000016930802,0.0006575835,0.0013128851,0.0000056963736,0.000005811661,0.00017580678,0.000013156606,0.00035440255,0.99541855,0.000048501155,0.0019883388,0.0000023293967],"about_ca_topic_score_codex":0.00012473791,"about_ca_topic_score_gemma":0.00022273045,"teacher_disagreement_score":0.0012323187,"about_ca_system_score_codex":0.00013964939,"about_ca_system_score_gemma":0.00008826175,"threshold_uncertainty_score":0.0041225553},"labels":[],"label_agreement":null},{"id":"W4417485252","doi":"10.1016/j.intimp.2025.116052","title":"“Emerging precision drug delivery systems for controlled activation of the cGAS–STING pathway in Cancer, infection, and autoimmune disorders”","year":2025,"lang":"en","type":"review","venue":"International Immunopharmacology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Discovery Centre","funders":"Rajiv Gandhi University of Health Sciences; Indian Council of Medical Research","keywords":"Stimulator of interferon genes; Sting; Innate immune system; Interferon; Acquired immune system; Cytokine; Immunotherapy; Drug delivery","score_opus":0.017402241314564564,"score_gpt":0.3386970052615144,"score_spread":0.32129476394694984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417485252","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00052790507,0.9930166,0.0014509895,0.0006792245,0.0017488744,0.00002232701,0.000047294237,0.000044237808,0.0024624842],"genre_scores_gemma":[0.0043674386,0.9878413,0.0014756626,0.001323518,0.0009209944,0.00003670322,0.00012036486,0.000008130452,0.0039059161],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99987495,0.00001822309,0.0000102325175,0.000019922001,0.00005077877,0.000025824269],"domain_scores_gemma":[0.99991035,0.000030803058,0.000020482054,0.0000034092704,0.00002261624,0.000012286297],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000545267,0.0008630151,0.00081390503,0.0007905003,0.00016985233,0.0005885852,0.00084239023,0.001005503,0.002182384],"category_scores_gemma":[0.00035040802,0.0002812843,0.00040990554,0.000772811,0.0004556235,0.001102336,0.0006627496,0.0019344691,0.0016317368],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016573796,0.00010938253,0.00006694031,0.006365021,0.00007871265,0.00016550705,0.00004075645,0.00054436806,0.021184988,0.011738251,0.07406695,0.88547325],"study_design_scores_gemma":[0.000045059263,0.00021937577,0.00027436123,0.0006076046,0.000051270654,0.00036329337,0.000014408042,0.00025158562,0.0043320595,0.0019753086,0.9918435,0.000022090615],"about_ca_topic_score_codex":0.0004742097,"about_ca_topic_score_gemma":0.0013002631,"teacher_disagreement_score":0.002182384,"about_ca_system_score_codex":0.00048605754,"about_ca_system_score_gemma":0.00042416388,"threshold_uncertainty_score":0.0073008537},"labels":[],"label_agreement":null},{"id":"W49784936","doi":"10.4049/jimmunol.186.supp.159.9","title":"Essential pro-survival role for caspase-8 during T-cell activation and embryonic development through inhibition of RIPK3-dependent necrosis (159.9)","year":2011,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research","funders":"","keywords":"Necroptosis; Programmed cell death; Apoptosis; Caspase 8; Biology; Caspase; Embryonic stem cell; Cell biology; FADD; T cell; Necrosis; Immune system; Immunology; Biochemistry; Genetics","score_opus":0.0201409368007533,"score_gpt":0.234460020788586,"score_spread":0.2143190839878327,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W49784936","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9890365,0.002190919,0.0043923245,0.00022070919,0.00004085716,0.00005664077,0.0013801537,0.0002838276,0.0023980536],"genre_scores_gemma":[0.993995,0.0005246656,0.0027811779,0.0000490837,0.0000068795393,0.000052319137,0.00063742924,0.000041955696,0.001911419],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997553,0.000042166048,0.00004594233,0.00004619857,0.000054016593,0.000056389017],"domain_scores_gemma":[0.9996747,0.00004089866,0.00016543371,0.00003672424,0.000021019763,0.0000613236],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021798356,0.00042490487,0.00024313896,0.0002309958,0.00015024186,0.0003548365,0.000327426,0.00032001504,0.0014740693],"category_scores_gemma":[0.00017551916,0.00017253176,0.00019669249,0.0001109943,0.00028891533,0.00022534606,0.00027643424,0.00068950444,0.0007474048],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014341169,0.000019713605,0.00014620645,0.000030429572,0.0000026063722,0.00006835413,0.000008820262,0.00004252879,0.99870324,0.000109220004,0.0000334763,0.00069199223],"study_design_scores_gemma":[0.00003547486,0.000232324,0.0027643084,0.000011358035,0.000010935788,0.00046129973,0.000021342898,0.00053598994,0.9938438,0.000060037153,0.0020196908,0.000003505453],"about_ca_topic_score_codex":0.00026527277,"about_ca_topic_score_gemma":0.000539797,"teacher_disagreement_score":0.0014740693,"about_ca_system_score_codex":0.00031716208,"about_ca_system_score_gemma":0.00024881418,"threshold_uncertainty_score":0.004931271},"labels":[],"label_agreement":null},{"id":"W609764414","doi":"10.1016/j.virol.2015.05.002","title":"Differential action of pateamine A on translation of genomic and subgenomic mRNAs from Sindbis virus","year":2015,"lang":"en","type":"article","venue":"Virology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Fundación Ramón Areces","keywords":"Subgenomic mRNA; Biology; Sindbis virus; Translation (biology); Protein biosynthesis; EIF4E; Messenger RNA; Virology; Alphavirus; Molecular biology; RNA; Cell biology; Virus; Genetics; Gene","score_opus":0.04859056550098987,"score_gpt":0.2621888455458763,"score_spread":0.21359828004488643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W609764414","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99779594,0.00062232866,0.0003970129,0.000052515796,0.000029840014,0.000012408859,0.00013544227,0.000015917603,0.00093865197],"genre_scores_gemma":[0.9980849,0.00027870195,0.00050660514,0.000050811137,0.0000125868,0.000013709675,0.00026959984,0.000009124098,0.00077402696],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986887,0.000032847256,0.00001144146,0.00002059129,0.000015572943,0.000050594874],"domain_scores_gemma":[0.9998294,0.00007655385,0.000021091397,0.000017848879,0.000018441735,0.000036621983],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019675343,0.00028860534,0.00025952718,0.00018794557,0.00023749689,0.0003326493,0.00018009942,0.00034634737,0.0016325535],"category_scores_gemma":[0.0003580524,0.00015169925,0.00031257648,0.00011636499,0.00027985402,0.0002494246,0.00019662347,0.0003718265,0.0002559786],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012015759,0.00002984071,0.00017723837,0.000027204578,0.0000065948193,0.000054031967,0.000011449476,0.00006824486,0.9969394,0.000113528644,0.000027124503,0.0013439337],"study_design_scores_gemma":[0.000036069017,0.00039798248,0.0034074117,0.0000038841354,0.000008556471,0.00008269242,0.000023895816,0.00065408857,0.994862,0.00004950823,0.00047003405,0.0000038289095],"about_ca_topic_score_codex":0.0007144599,"about_ca_topic_score_gemma":0.0007882475,"teacher_disagreement_score":0.0016325535,"about_ca_system_score_codex":0.0003249782,"about_ca_system_score_gemma":0.00027577535,"threshold_uncertainty_score":0.005461395},"labels":[],"label_agreement":null},{"id":"W62980418","doi":"","title":"Induction of IRF-3 and IRF-7 phosphorylation following activation of the RIG-I pathway.","year":2006,"lang":"en","type":"article","venue":"PubMed","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Terry Fox Research Institute","funders":"","keywords":"TRIF; Interferon regulatory factors; Signal transducing adaptor protein; Phosphorylation; RIG-I; Biology; Signal transduction; IRF3; Interferon; Cell biology; Innate immune system; NS3; Kinase; Molecular biology; Virology; Receptor; Toll-like receptor; Virus; Biochemistry; Hepatitis C virus","score_opus":0.010367087625200899,"score_gpt":0.1875246815550715,"score_spread":0.1771575939298706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W62980418","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9868873,0.0036228385,0.0041556554,0.00016698593,0.000093931914,0.0000709065,0.0010620073,0.00014682153,0.0037937667],"genre_scores_gemma":[0.9899711,0.0013414177,0.0033071523,0.00008127916,0.00001996171,0.00006547865,0.002002377,0.000020403735,0.0031908094],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983215,0.000032179676,0.000010908106,0.000025145686,0.00003414016,0.000065476845],"domain_scores_gemma":[0.999912,0.000014208935,0.00002505431,0.000015389993,0.000011282293,0.000022039429],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017443951,0.00046896824,0.00018855442,0.0002233793,0.00013019286,0.00019157866,0.00015818713,0.00024524808,0.0024282502],"category_scores_gemma":[0.00009334662,0.00012813826,0.00050241523,0.000113929826,0.00018368436,0.00020718438,0.00025756695,0.0006143141,0.0010870575],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013685653,0.000018150275,0.00011738771,0.000051402658,0.000004551746,0.000041023497,0.000009705956,0.000023036755,0.9985511,0.00009306736,0.000036443962,0.0009172595],"study_design_scores_gemma":[0.000015484899,0.00015390023,0.004146366,0.000009735183,0.000011271964,0.00025671537,0.000017913171,0.0003998296,0.9930059,0.00009122401,0.0018873612,0.0000043680498],"about_ca_topic_score_codex":0.00023508292,"about_ca_topic_score_gemma":0.00032642332,"teacher_disagreement_score":0.0024282502,"about_ca_system_score_codex":0.00028309308,"about_ca_system_score_gemma":0.00019953422,"threshold_uncertainty_score":0.008123338},"labels":[],"label_agreement":null},{"id":"W6888701783","doi":"10.2139/ssrn.5164453","title":"DNA Demethylation Mediated Endogenous Retroviruses Transcription Promotes Aberrant T Cell Differentiation in Systemic Lupus Erythematosus via RIG-I Pathway","year":2025,"lang":"en","type":"preprint","venue":"SSRN Electronic Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Fraser Institute","funders":"","keywords":"Cellular differentiation; Transcriptome; Lupus erythematosus; Autoantibody; Autoimmune disease; T cell; Pathogenesis; Systemic lupus erythematosus; Autoimmunity","score_opus":0.013973491632412195,"score_gpt":0.22171172438248243,"score_spread":0.20773823275007025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6888701783","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99004096,0.002322176,0.0042067063,0.00016360306,0.000071105685,0.000013766837,0.00042611835,0.00018375224,0.0025718058],"genre_scores_gemma":[0.9956772,0.00044802882,0.0008842017,0.0000425565,0.000014826752,0.00001007027,0.00028655882,0.000019220666,0.0026173533],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998454,0.000030722782,0.000014015502,0.000034143053,0.00002942142,0.000046245135],"domain_scores_gemma":[0.9999094,0.000016997472,0.000027690372,0.00001989804,0.0000083144105,0.000017682298],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016512447,0.0002237357,0.00023687024,0.00021965013,0.000115528484,0.00033766963,0.0001417221,0.00028512513,0.0039152754],"category_scores_gemma":[0.00014459493,0.00013602,0.00028623638,0.00012748111,0.00020120991,0.00020325673,0.00023014634,0.00061951915,0.0010230809],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029305412,0.000017329821,0.0005613304,0.000035979316,0.0000057014363,0.00016127886,0.00001741275,0.000052934003,0.9972492,0.00024260332,0.00006276855,0.0013004353],"study_design_scores_gemma":[0.000031533265,0.00020974946,0.011222188,0.000008898761,0.000025834943,0.0009823764,0.0000631159,0.0013504978,0.98393345,0.00037266396,0.0017943329,0.000005306633],"about_ca_topic_score_codex":0.0001502046,"about_ca_topic_score_gemma":0.0001596674,"teacher_disagreement_score":0.0039152754,"about_ca_system_score_codex":0.00018944699,"about_ca_system_score_gemma":0.00010541801,"threshold_uncertainty_score":0.013097942},"labels":[],"label_agreement":null},{"id":"W6901602214","doi":"10.60692/wth8p-t8a16","title":"Additional file 6 of Identification and integrated analysis of lncRNAs and miRNAs in IPEC-J2 cells provide novel insight into the regulation of the innate immune response by PDCoV infection","year":2022,"lang":"en","type":"article","venue":"Greater South Information System","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Innate immune system; Identification (biology); microRNA; Immune system; Gene","score_opus":0.009314937996891485,"score_gpt":0.18865933832125661,"score_spread":0.17934440032436513,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6901602214","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002558496,0.000027499209,0.00036358583,0.0000806182,0.00003973338,0.000052566887,0.9980288,0.0005427197,0.0006085846],"genre_scores_gemma":[0.008694147,0.00020000398,0.0047659148,0.0005245377,0.0001007783,0.0009697755,0.97604316,0.0011982777,0.0075034336],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991917,0.00009162296,0.00014738589,0.00019438319,0.00024495547,0.0001301136],"domain_scores_gemma":[0.98805606,0.0086313635,0.00079007505,0.00069406687,0.0014302453,0.00039811208],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0016158505,0.0012246153,0.0016762137,0.0024204003,0.0010860515,0.0019690187,0.0017871879,0.0015005649,0.8262244],"category_scores_gemma":[0.015046403,0.0007018028,0.0011370969,0.0034233269,0.0003748401,0.0016163435,0.0010748929,0.0012032349,0.15426101],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012742691,0.00023235616,0.004138724,0.008556491,0.00014346193,0.00030765345,0.00017061598,0.0010465785,0.0028834206,0.0012849892,0.9624199,0.017541489],"study_design_scores_gemma":[0.0070600975,0.00074655405,0.046269353,0.004769799,0.00034048982,0.0010812202,0.00069828937,0.0040106517,0.008701822,0.013826605,0.9121167,0.00037826807],"about_ca_topic_score_codex":0.0051239477,"about_ca_topic_score_gemma":0.009286289,"teacher_disagreement_score":0.8262244,"about_ca_system_score_codex":0.0010360616,"about_ca_system_score_gemma":0.0019706,"threshold_uncertainty_score":0.24786985},"labels":[],"label_agreement":null},{"id":"W6901705792","doi":"10.60692/amw22-78w97","title":"SARS-CoV-2 impairs interferon production via NSP2-induced repression of mRNA translation","year":2022,"lang":"en","type":"article","venue":"Greater South Information System","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; University of Alberta; Children's Hospital of Eastern Ontario; McGill University; Christie (Canada); University of Manitoba; Princess Margaret Cancer Centre; University of Toronto; University Health Network","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Innate immune system; Translation (biology); Messenger RNA; Interferon; Immune system; Psychological repression; RNA; Protein biosynthesis; Cytokine; Mechanism (biology)","score_opus":0.04607211759016746,"score_gpt":0.24415699991822348,"score_spread":0.19808488232805602,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6901705792","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968918,0.00048683013,0.0008838412,0.000058249017,0.000028497674,0.0000146219545,0.0002990394,0.0000492083,0.0012878191],"genre_scores_gemma":[0.9950499,0.00031535697,0.0010143023,0.0000384348,0.000008138048,0.00002474707,0.0005599977,0.000013891675,0.002975263],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986184,0.000029861927,0.000015836651,0.000021784266,0.00003855347,0.000032140913],"domain_scores_gemma":[0.9999263,0.000012640497,0.000023771809,0.000010376699,0.0000058973505,0.000021066262],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012657604,0.00041923547,0.00024323401,0.00015284133,0.00008993694,0.00022401725,0.000149601,0.00024561313,0.001462314],"category_scores_gemma":[0.000074956006,0.000114667586,0.00017235498,0.000076598226,0.0002113926,0.00017477099,0.00015818248,0.00051313214,0.00033532776],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006139185,0.000023273824,0.000056274574,0.000009416954,0.0000017564895,0.000020104662,0.0000031445652,0.000030625968,0.9995721,0.000042932545,0.000012868062,0.00016601935],"study_design_scores_gemma":[0.000014064036,0.00025568318,0.0025444978,0.0000036340352,0.000004108965,0.00010741646,0.000013584599,0.0008199499,0.9954032,0.000030759104,0.0008004156,0.000002646534],"about_ca_topic_score_codex":0.00032095888,"about_ca_topic_score_gemma":0.00045049505,"teacher_disagreement_score":0.001462314,"about_ca_system_score_codex":0.00020578282,"about_ca_system_score_gemma":0.00017029991,"threshold_uncertainty_score":0.004891932},"labels":[],"label_agreement":null},{"id":"W6901802536","doi":"10.6084/m9.figshare.12486839","title":"Additional file 1 of Dynamic rewiring of the human interactome by interferon signaling","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Interactome; Interferon; Signal transduction; Human genome; Alpha interferon; Proteogenomics","score_opus":0.02060668275114582,"score_gpt":0.2391672253381548,"score_spread":0.21856054258700897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6901802536","genre_codex":"dataset","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012705212,0.000043011496,0.00042102518,0.00008236676,0.000037623675,0.000022647899,0.9974234,0.0007282125,0.001114682],"genre_scores_gemma":[0.0044296165,0.00022565719,0.0033554928,0.00038489356,0.0000615549,0.0003766242,0.9844208,0.0014124977,0.0053330064],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991893,0.0001076861,0.00008375827,0.00027253976,0.00022423727,0.000122389],"domain_scores_gemma":[0.9915495,0.006063064,0.00036109606,0.00078619015,0.00085778756,0.00038235087],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013372417,0.0014497524,0.0014229157,0.0027133052,0.0011192902,0.002558537,0.002001439,0.0012546955,0.8234441],"category_scores_gemma":[0.013064807,0.00074697554,0.0012143007,0.003677864,0.0003668568,0.0023742036,0.0015427462,0.0013456374,0.25076145],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024617434,0.000042917538,0.0012685651,0.0024775541,0.000060679176,0.000077008604,0.000046889283,0.00050529203,0.00068542245,0.0013034545,0.9855379,0.0077480664],"study_design_scores_gemma":[0.00209347,0.0002056387,0.016297478,0.0021604428,0.00021067656,0.0007737164,0.00026495694,0.0030153973,0.003286254,0.0188017,0.95273787,0.00015237137],"about_ca_topic_score_codex":0.005115952,"about_ca_topic_score_gemma":0.010625002,"teacher_disagreement_score":0.8234441,"about_ca_system_score_codex":0.0012135977,"about_ca_system_score_gemma":0.0019619155,"threshold_uncertainty_score":0.25183547},"labels":[],"label_agreement":null},{"id":"W6901867786","doi":"10.60692/fj4kn-qsn34","title":"Additional file 6 of Identification and integrated analysis of lncRNAs and miRNAs in IPEC-J2 cells provide novel insight into the regulation of the innate immune response by PDCoV infection","year":2022,"lang":"en","type":"article","venue":"Greater South Information System","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Innate immune system; Identification (biology); microRNA; Immune system; Gene","score_opus":0.009314937996891485,"score_gpt":0.18865933832125661,"score_spread":0.17934440032436513,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6901867786","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002558496,0.000027499209,0.00036358583,0.0000806182,0.00003973338,0.000052566887,0.9980288,0.0005427197,0.0006085846],"genre_scores_gemma":[0.008694147,0.00020000398,0.0047659148,0.0005245377,0.0001007783,0.0009697755,0.97604316,0.0011982777,0.0075034336],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991917,0.00009162296,0.00014738589,0.00019438319,0.00024495547,0.0001301136],"domain_scores_gemma":[0.98805606,0.0086313635,0.00079007505,0.00069406687,0.0014302453,0.00039811208],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0016158505,0.0012246153,0.0016762137,0.0024204003,0.0010860515,0.0019690187,0.0017871879,0.0015005649,0.8262244],"category_scores_gemma":[0.015046403,0.0007018028,0.0011370969,0.0034233269,0.0003748401,0.0016163435,0.0010748929,0.0012032349,0.15426101],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012742691,0.00023235616,0.004138724,0.008556491,0.00014346193,0.00030765345,0.00017061598,0.0010465785,0.0028834206,0.0012849892,0.9624199,0.017541489],"study_design_scores_gemma":[0.0070600975,0.00074655405,0.046269353,0.004769799,0.00034048982,0.0010812202,0.00069828937,0.0040106517,0.008701822,0.013826605,0.9121167,0.00037826807],"about_ca_topic_score_codex":0.0051239477,"about_ca_topic_score_gemma":0.009286289,"teacher_disagreement_score":0.8262244,"about_ca_system_score_codex":0.0010360616,"about_ca_system_score_gemma":0.0019706,"threshold_uncertainty_score":0.24786985},"labels":[],"label_agreement":null},{"id":"W6901972681","doi":"10.6084/m9.figshare.13152376.v1","title":"Additional file 1 of The landscape of host genetic factors involved in immune response to common viral infections","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut universitaire de cardiologie et de pneumologie de Québec","funders":"","keywords":"Host (biology); Immune system; Genome; Host response; Key (lock); Race (biology)","score_opus":0.020749483269167097,"score_gpt":0.23000161472788735,"score_spread":0.20925213145872026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6901972681","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001365015,0.000029001743,0.0003224147,0.000108229644,0.00003964065,0.00004731248,0.99729806,0.0005271521,0.001491735],"genre_scores_gemma":[0.0044760588,0.00023035437,0.0032870027,0.00055830064,0.00013870919,0.00057854113,0.9771631,0.0014730706,0.012094813],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99936146,0.0000991936,0.00008430623,0.00016774182,0.00017126308,0.00011595061],"domain_scores_gemma":[0.9886014,0.007478512,0.0007159662,0.00077744154,0.001810664,0.0006160806],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0015110112,0.0012370415,0.0014075073,0.0025309138,0.0010262511,0.0019228607,0.0018956241,0.001112389,0.903605],"category_scores_gemma":[0.013849678,0.00064729183,0.0008664197,0.0040368447,0.00031311484,0.0023284645,0.0014193186,0.0011311366,0.3036077],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026563514,0.00007488261,0.0011960167,0.0022903453,0.000034376542,0.00005792283,0.00004708172,0.00027150483,0.00036463913,0.0009058391,0.9862982,0.008193629],"study_design_scores_gemma":[0.00219019,0.00023213755,0.01770956,0.0020708505,0.00012001049,0.00046571522,0.00024197165,0.00097580126,0.0016625863,0.009352909,0.96485525,0.00012299772],"about_ca_topic_score_codex":0.0046153953,"about_ca_topic_score_gemma":0.0068520415,"teacher_disagreement_score":0.903605,"about_ca_system_score_codex":0.0010563034,"about_ca_system_score_gemma":0.0016866344,"threshold_uncertainty_score":0.1374957},"labels":[],"label_agreement":null},{"id":"W6901972856","doi":"10.6084/m9.figshare.26599046.v1","title":"Additional file 2 of RHAMM regulates MMTV-PyMT-induced lung metastasis by connecting STING-dependent DNA damage sensing to interferon/STAT1 pro-apoptosis signaling","year":2024,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Lawson Health Research Institute","funders":"","keywords":"DNA damage; Signal transduction; DNA; Lung cancer; Metastasis; CHEK1","score_opus":0.02567729717027713,"score_gpt":0.2626266975351795,"score_spread":0.23694940036490234,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6901972856","genre_codex":"dataset","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00017713383,0.000035888625,0.00038912232,0.00010562971,0.000058628742,0.000057963938,0.9972479,0.0006555847,0.0012721543],"genre_scores_gemma":[0.005769302,0.00018980936,0.003273041,0.00043842004,0.00009889757,0.0007673524,0.9781944,0.0016654377,0.009603333],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99938416,0.00006993118,0.000077993194,0.00016980487,0.00019134473,0.00010672042],"domain_scores_gemma":[0.9925287,0.0048500067,0.00039189818,0.00058357674,0.0012563624,0.0003895808],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001131371,0.0013430332,0.0017023967,0.0017980036,0.001091544,0.0022447265,0.0023018213,0.0014076608,0.9070651],"category_scores_gemma":[0.012339958,0.00090895675,0.0013030085,0.0029783032,0.00030083483,0.0020330728,0.0010515181,0.0013064395,0.29401433],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052485336,0.00012741331,0.0014346174,0.0033019907,0.00005123762,0.000112651025,0.00005422124,0.0005023239,0.0009528942,0.00088003714,0.9823126,0.009745147],"study_design_scores_gemma":[0.005577282,0.0005569854,0.024969155,0.0035554885,0.00024028655,0.00085005,0.00034583698,0.0032218138,0.0061174426,0.013170348,0.9411643,0.00023105399],"about_ca_topic_score_codex":0.0054395255,"about_ca_topic_score_gemma":0.008570421,"teacher_disagreement_score":0.9070651,"about_ca_system_score_codex":0.001270216,"about_ca_system_score_gemma":0.0016872454,"threshold_uncertainty_score":0.13256037},"labels":[],"label_agreement":null},{"id":"W6902170464","doi":"10.6084/m9.figshare.26599043.v1","title":"Additional file 1 of RHAMM regulates MMTV-PyMT-induced lung metastasis by connecting STING-dependent DNA damage sensing to interferon/STAT1 pro-apoptosis signaling","year":2024,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Lawson Health Research Institute","funders":"","keywords":"DNA damage; Signal transduction; DNA; Lung cancer; Metastasis; CHEK1","score_opus":0.026484583712412135,"score_gpt":0.26311094756457004,"score_spread":0.2366263638521579,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6902170464","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00022625011,0.00005055998,0.0006341019,0.00011401226,0.00006521331,0.00006692918,0.99647385,0.0009679505,0.0014011603],"genre_scores_gemma":[0.0065786843,0.0002523573,0.0040603736,0.00043837444,0.00010169791,0.0009454496,0.97603476,0.0020144177,0.009573965],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992537,0.0000829851,0.00008803097,0.00018952864,0.0002522691,0.00013344164],"domain_scores_gemma":[0.9927164,0.0047951867,0.00038806687,0.0006226824,0.0010564018,0.0004213346],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013074963,0.0015193499,0.0019365075,0.0020762794,0.0012822425,0.0023087997,0.0026633374,0.0015507318,0.89674103],"category_scores_gemma":[0.011857305,0.0012139439,0.0013977755,0.0031779094,0.0003643411,0.0020444996,0.0011288755,0.0016229362,0.30868432],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061344675,0.00017345927,0.0015417931,0.004010796,0.000066725814,0.00013616362,0.00006757934,0.0007266563,0.0021546846,0.0011871912,0.97744924,0.011872276],"study_design_scores_gemma":[0.006711636,0.000833038,0.03125106,0.0036167619,0.00028508544,0.001130335,0.00037309705,0.0049101063,0.012842856,0.01437114,0.9233498,0.00032510108],"about_ca_topic_score_codex":0.0050000115,"about_ca_topic_score_gemma":0.008708436,"teacher_disagreement_score":0.89674103,"about_ca_system_score_codex":0.0013123426,"about_ca_system_score_gemma":0.001939734,"threshold_uncertainty_score":0.1472863},"labels":[],"label_agreement":null},{"id":"W6902207519","doi":"10.6084/m9.figshare.28703486.v1","title":"Additional file 3 of ASFV pS183L protein negatively regulates RLR-mediated antiviral signalling by blocking MDA5 oligomerisation","year":2025,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Blocking (statistics); HEK 293 cells; MDA5; Cell culture; Signalling; Antibody; Block (permutation group theory)","score_opus":0.010207681343165964,"score_gpt":0.22094691675341133,"score_spread":0.21073923541024536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6902207519","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00019803012,0.000028458917,0.00039679653,0.000099784935,0.000057351364,0.00011394342,0.99708,0.0006819908,0.0013437158],"genre_scores_gemma":[0.00640287,0.00020460215,0.0034211224,0.00048976205,0.00011476473,0.0014816894,0.975392,0.0018441593,0.010649125],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991161,0.00009937915,0.00015733748,0.00018525578,0.0002872038,0.0001547281],"domain_scores_gemma":[0.98767906,0.008507697,0.0006711391,0.00080624956,0.0017637319,0.00057209126],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0019673035,0.0014294133,0.002090204,0.0020111238,0.0012313337,0.0023256738,0.0021906141,0.0014884867,0.9227339],"category_scores_gemma":[0.022722648,0.0008683884,0.0011470868,0.0032073793,0.00038344602,0.0019981633,0.0011721931,0.0010803301,0.29540288],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00089056906,0.00018669719,0.0017001624,0.00493218,0.00007288555,0.00017435283,0.00008524273,0.0004925658,0.0010122907,0.0009005273,0.97839844,0.011154048],"study_design_scores_gemma":[0.0071893143,0.0007549034,0.02210674,0.0047123907,0.0002160236,0.0009232715,0.00036175043,0.0021429092,0.0040913993,0.009707278,0.9475667,0.00022732108],"about_ca_topic_score_codex":0.0061530825,"about_ca_topic_score_gemma":0.0091240555,"teacher_disagreement_score":0.9227339,"about_ca_system_score_codex":0.0012190046,"about_ca_system_score_gemma":0.0021704547,"threshold_uncertainty_score":0.11021066},"labels":[],"label_agreement":null},{"id":"W6902235600","doi":"10.6084/m9.figshare.26599043","title":"Additional file 1 of RHAMM regulates MMTV-PyMT-induced lung metastasis by connecting STING-dependent DNA damage sensing to interferon/STAT1 pro-apoptosis signaling","year":2024,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Lawson Health Research Institute","funders":"","keywords":"DNA damage; Signal transduction; DNA; Lung cancer; Metastasis; CHEK1","score_opus":0.026484583712412135,"score_gpt":0.26311094756457004,"score_spread":0.2366263638521579,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6902235600","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00022625011,0.00005055998,0.0006341019,0.00011401226,0.00006521331,0.00006692918,0.99647385,0.0009679505,0.0014011603],"genre_scores_gemma":[0.0065786843,0.0002523573,0.0040603736,0.00043837444,0.00010169791,0.0009454496,0.97603476,0.0020144177,0.009573965],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992537,0.0000829851,0.00008803097,0.00018952864,0.0002522691,0.00013344164],"domain_scores_gemma":[0.9927164,0.0047951867,0.00038806687,0.0006226824,0.0010564018,0.0004213346],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013074963,0.0015193499,0.0019365075,0.0020762794,0.0012822425,0.0023087997,0.0026633374,0.0015507318,0.89674103],"category_scores_gemma":[0.011857305,0.0012139439,0.0013977755,0.0031779094,0.0003643411,0.0020444996,0.0011288755,0.0016229362,0.30868432],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061344675,0.00017345927,0.0015417931,0.004010796,0.000066725814,0.00013616362,0.00006757934,0.0007266563,0.0021546846,0.0011871912,0.97744924,0.011872276],"study_design_scores_gemma":[0.006711636,0.000833038,0.03125106,0.0036167619,0.00028508544,0.001130335,0.00037309705,0.0049101063,0.012842856,0.01437114,0.9233498,0.00032510108],"about_ca_topic_score_codex":0.0050000115,"about_ca_topic_score_gemma":0.008708436,"teacher_disagreement_score":0.89674103,"about_ca_system_score_codex":0.0013123426,"about_ca_system_score_gemma":0.001939734,"threshold_uncertainty_score":0.1472863},"labels":[],"label_agreement":null},{"id":"W6902346243","doi":"10.6084/m9.figshare.26777344.v1","title":"Additional file 2 of Hospital referrals, exclusions from hospital care, and deaths among long-term care residents in the Community of Madrid during the March–April 2020 COVID-19 epidemic period: a multivariate time series analysis","year":2024,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Multivariate analysis; Multivariate statistics; Hospital care; MEDLINE; Epidemiology","score_opus":0.015100033809585175,"score_gpt":0.2681337011475642,"score_spread":0.253033667337979,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6902346243","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0024176,0.000020470177,0.00010921994,0.000064376436,0.000016592945,0.000040229996,0.99680054,0.000056040615,0.00047493092],"genre_scores_gemma":[0.05843456,0.00015400602,0.0015634364,0.00035361893,0.00012879778,0.0013609147,0.928534,0.00016217733,0.00930855],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992599,0.00013548818,0.00015417175,0.000196594,0.00010869611,0.00014524853],"domain_scores_gemma":[0.9885014,0.00740895,0.00202722,0.00063458254,0.0010007073,0.0004272199],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010841582,0.0006706658,0.00095397467,0.0026107845,0.0005441671,0.0009462504,0.0012667653,0.00096569746,0.5534303],"category_scores_gemma":[0.01670869,0.0003953077,0.00086728035,0.0047527226,0.00017444602,0.0009601891,0.0006920475,0.00077444065,0.033940744],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010162316,0.0003921804,0.08974114,0.002285719,0.0003022634,0.00022704586,0.000165038,0.0017005292,0.00012560302,0.0011484919,0.88655996,0.01633578],"study_design_scores_gemma":[0.0058623115,0.000995671,0.70253557,0.0033677188,0.00065935386,0.0011176362,0.0019923479,0.0074701537,0.00055466953,0.00584768,0.26938733,0.00020949525],"about_ca_topic_score_codex":0.023315437,"about_ca_topic_score_gemma":0.02173117,"teacher_disagreement_score":0.5534303,"about_ca_system_score_codex":0.0007939734,"about_ca_system_score_gemma":0.0015061571,"threshold_uncertainty_score":0.63697743},"labels":[],"label_agreement":null},{"id":"W6912911026","doi":"10.5281/zenodo.7335844","title":"Are Helicases a Druggable Protein Family?","year":2022,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium","funders":"","keywords":"Druggability; Helicase; Drug discovery; Presentation (obstetrics); Antiviral drug; Open science","score_opus":0.03532096206949233,"score_gpt":0.2376492699734553,"score_spread":0.20232830790396297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6912911026","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.054713547,0.74868715,0.010675319,0.115945175,0.008942359,0.000055661996,0.0011249605,0.00071767345,0.059138115],"genre_scores_gemma":[0.4256191,0.43394384,0.0051278644,0.035684478,0.008199268,0.00016282321,0.0018199885,0.00013552811,0.089307114],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9996885,0.00006090678,0.000016526086,0.00006966321,0.00008356883,0.00008080943],"domain_scores_gemma":[0.9996364,0.000069728376,0.00008826825,0.000048127007,0.000063525345,0.00009387937],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063054747,0.00048241334,0.0007419314,0.00031589283,0.0005114205,0.0020380565,0.00032677175,0.0016595182,0.0065885955],"category_scores_gemma":[0.0010242,0.0002402181,0.0002805946,0.00054691546,0.001074078,0.003088347,0.0005099382,0.0015280436,0.0055195796],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012727614,0.000111492365,0.0037852472,0.001630224,0.00015701696,0.0011831274,0.0007227493,0.0006054984,0.1473648,0.14470904,0.22194666,0.4765113],"study_design_scores_gemma":[0.000045666668,0.0002057835,0.0023696823,0.00015156515,0.000033445547,0.0012602353,0.00033815939,0.00021144548,0.015268412,0.03602725,0.94406146,0.000026895994],"about_ca_topic_score_codex":0.00030551286,"about_ca_topic_score_gemma":0.00028271545,"teacher_disagreement_score":0.0065885955,"about_ca_system_score_codex":0.0006477806,"about_ca_system_score_gemma":0.00051310187,"threshold_uncertainty_score":0.022041082},"labels":[],"label_agreement":null},{"id":"W6920532895","doi":"10.6084/m9.figshare.12486830.v1","title":"Additional file 13 of Dynamic rewiring of the human interactome by interferon signaling","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Interactome; Interferon; Signal transduction; Human proteins; Human genome","score_opus":0.020481009819706925,"score_gpt":0.24053124633827802,"score_spread":0.22005023651857109,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6920532895","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006967235,0.00041587418,0.0004239767,0.00085177034,0.0003022564,0.000078005,0.9924999,0.0008337691,0.0045249136],"genre_scores_gemma":[0.005558105,0.0024246415,0.0038529676,0.003809745,0.0008193664,0.0011507934,0.93353593,0.0025249817,0.046323534],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998789,0.00023793156,0.00017238442,0.0002762003,0.00037727016,0.00014713244],"domain_scores_gemma":[0.9753272,0.017146826,0.0012873267,0.001430097,0.003824487,0.0009840182],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0026710504,0.0011228438,0.0017752597,0.0041251983,0.00091382576,0.0031819798,0.0025332237,0.0018533989,0.9010207],"category_scores_gemma":[0.030256063,0.0007359897,0.0015508189,0.0048865485,0.00036522478,0.0036088475,0.0019146777,0.0012709801,0.32800576],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009651352,0.000007315839,0.00020390877,0.0024587663,0.0000262003,0.000033466687,0.00001859874,0.00008499412,0.00006727745,0.0006823757,0.99001116,0.006309334],"study_design_scores_gemma":[0.00065935904,0.000046620975,0.0034488323,0.0035979718,0.00010919645,0.00024907658,0.00007601964,0.00020504877,0.00033409463,0.006195821,0.9850198,0.00005816994],"about_ca_topic_score_codex":0.005175974,"about_ca_topic_score_gemma":0.0087891305,"teacher_disagreement_score":0.9010207,"about_ca_system_score_codex":0.0019179134,"about_ca_system_score_gemma":0.0028205588,"threshold_uncertainty_score":0.14118195},"labels":[],"label_agreement":null},{"id":"W6920551747","doi":"10.6084/m9.figshare.29595562","title":"Additional file 7 of Double vulnerability of active-NRF2 lung squamous cell carcinoma to NRF2 and TRIM24","year":2025,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Vulnerability (computing); Lung; Basal cell; Lung cancer; Cell; Carcinoma","score_opus":0.015293418393331558,"score_gpt":0.25361688498423146,"score_spread":0.2383234665908999,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6920551747","genre_codex":"dataset","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021063253,0.000029161984,0.00021071531,0.00011235588,0.00007203467,0.000042340056,0.9975383,0.00042787762,0.0013566318],"genre_scores_gemma":[0.0084746415,0.00017644024,0.0031370714,0.0008817058,0.00017345465,0.00089198083,0.9703526,0.0015518428,0.014360299],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992823,0.00007716494,0.000092588394,0.0001801068,0.00020645723,0.00016145453],"domain_scores_gemma":[0.984539,0.010801752,0.00078684906,0.0011517078,0.00212904,0.00059173704],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011593672,0.0011976378,0.0013550803,0.0029975576,0.0007920816,0.0018795979,0.0017445253,0.0017485897,0.91972256],"category_scores_gemma":[0.017764091,0.0005879497,0.0015170506,0.0024920662,0.00033007152,0.0015278239,0.0011794043,0.0009765886,0.32758224],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004389166,0.00013681667,0.002426503,0.0021641867,0.00007663529,0.00013992193,0.00004603082,0.0003403628,0.00035621037,0.0005533614,0.9841614,0.009159598],"study_design_scores_gemma":[0.0055814767,0.00038219753,0.043799173,0.0036435402,0.00035295446,0.0013734326,0.00051246793,0.0025520495,0.0025263003,0.015542778,0.923471,0.00026276745],"about_ca_topic_score_codex":0.005539408,"about_ca_topic_score_gemma":0.010571396,"teacher_disagreement_score":0.91972256,"about_ca_system_score_codex":0.001171197,"about_ca_system_score_gemma":0.0016210311,"threshold_uncertainty_score":0.11450595},"labels":[],"label_agreement":null},{"id":"W6920599544","doi":"10.60692/fks9n-mq885","title":"UBXN3B positively regulates STING-mediated antiviral immune responses","year":2018,"lang":"en","type":"article","venue":"Greater South Information System","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Immune system; Vesicular stomatitis virus; Ubiquitin ligase; Sting; Virus; Herpes simplex virus; Mutation; Bystander effect; Innate immune system","score_opus":0.019973317075667005,"score_gpt":0.21943274429208925,"score_spread":0.19945942721642224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6920599544","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9911083,0.003839901,0.0019529277,0.000114975155,0.000029512887,0.0000075786616,0.00055343896,0.00008890796,0.0023044206],"genre_scores_gemma":[0.9946733,0.0011201551,0.0009184465,0.000040559215,0.0000070574297,0.000008048201,0.00043195175,0.000013922619,0.0027864908],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999138,0.000013867069,0.000008464491,0.000021816359,0.000021471184,0.000020574607],"domain_scores_gemma":[0.99994385,0.0000049343494,0.000019376808,0.000004772475,0.000005726506,0.00002123036],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000105664774,0.0002579277,0.00017120596,0.00013744477,0.00021828097,0.0002701642,0.00011113971,0.00014904114,0.002353488],"category_scores_gemma":[0.000061715014,0.00008057612,0.00013927558,0.00010684752,0.00019662423,0.00017552184,0.00021971212,0.00025806227,0.00045728893],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009999166,0.0000053726467,0.00057901343,0.000021634574,0.0000016279047,0.000042915086,0.00000775218,0.00002064927,0.99813807,0.00007899016,0.000042371372,0.0009616384],"study_design_scores_gemma":[0.00001732533,0.00011882482,0.06626237,0.000024739431,0.000018876419,0.0006175617,0.00006443614,0.0013941595,0.9263087,0.00015644931,0.0050107124,0.000005835091],"about_ca_topic_score_codex":0.0004243436,"about_ca_topic_score_gemma":0.00093656435,"teacher_disagreement_score":0.002353488,"about_ca_system_score_codex":0.00026133654,"about_ca_system_score_gemma":0.00015657934,"threshold_uncertainty_score":0.0078731775},"labels":[],"label_agreement":null},{"id":"W6920604745","doi":"10.6084/m9.figshare.22978265.v1","title":"Additional file 1 of Author Correction: Innate antiviral defense demonstrates high energetic efficiency in a bony fish","year":2023,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Fish <Actinopterygii>; Innate immune system; Key (lock); Mechanism (biology)","score_opus":0.017951437645382023,"score_gpt":0.23677912692790004,"score_spread":0.21882768928251803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6920604745","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002896004,0.00009824624,0.0009293401,0.0008497506,0.0013144066,0.00016892274,0.99216545,0.0007061913,0.0034781806],"genre_scores_gemma":[0.022677286,0.000887114,0.012429759,0.0044774516,0.0021566513,0.003728446,0.86395943,0.006868539,0.082815215],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987134,0.0002525695,0.00023797048,0.00031611137,0.00032617946,0.00015373398],"domain_scores_gemma":[0.9516054,0.036232382,0.0015607856,0.0022422434,0.007552784,0.00080648006],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0024734407,0.0012533875,0.0015483932,0.0030561932,0.0015758526,0.002219205,0.0021637166,0.0017123537,0.9122913],"category_scores_gemma":[0.075579956,0.0008360804,0.0014584999,0.004327134,0.0006500252,0.0023471285,0.0016018692,0.001485523,0.29964268],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002106976,0.0000265052,0.0007808416,0.0017157437,0.000025258201,0.00007521573,0.000053874242,0.00016797284,0.00008596018,0.0005328156,0.9907007,0.005624379],"study_design_scores_gemma":[0.0028626958,0.00021728524,0.0147653585,0.004670206,0.00019328255,0.0010435297,0.0005026994,0.0008685758,0.0007635599,0.012879828,0.9610487,0.00018426342],"about_ca_topic_score_codex":0.0090766065,"about_ca_topic_score_gemma":0.010829869,"teacher_disagreement_score":0.9122913,"about_ca_system_score_codex":0.0011742488,"about_ca_system_score_gemma":0.0025171235,"threshold_uncertainty_score":0.12510574},"labels":[],"label_agreement":null},{"id":"W6920620734","doi":"10.6084/m9.figshare.13152376","title":"Additional file 1 of The landscape of host genetic factors involved in immune response to common viral infections","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut universitaire de cardiologie et de pneumologie de Québec","funders":"","keywords":"Host (biology); Immune system; Genome; Host response; Key (lock); Race (biology)","score_opus":0.020749483269167097,"score_gpt":0.23000161472788735,"score_spread":0.20925213145872026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6920620734","genre_codex":"dataset","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001365015,0.000029001743,0.0003224147,0.000108229644,0.00003964065,0.00004731248,0.99729806,0.0005271521,0.001491735],"genre_scores_gemma":[0.0044760588,0.00023035437,0.0032870027,0.00055830064,0.00013870919,0.00057854113,0.9771631,0.0014730706,0.012094813],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99936146,0.0000991936,0.00008430623,0.00016774182,0.00017126308,0.00011595061],"domain_scores_gemma":[0.9886014,0.007478512,0.0007159662,0.00077744154,0.001810664,0.0006160806],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0015110112,0.0012370415,0.0014075073,0.0025309138,0.0010262511,0.0019228607,0.0018956241,0.001112389,0.903605],"category_scores_gemma":[0.013849678,0.00064729183,0.0008664197,0.0040368447,0.00031311484,0.0023284645,0.0014193186,0.0011311366,0.3036077],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026563514,0.00007488261,0.0011960167,0.0022903453,0.000034376542,0.00005792283,0.00004708172,0.00027150483,0.00036463913,0.0009058391,0.9862982,0.008193629],"study_design_scores_gemma":[0.00219019,0.00023213755,0.01770956,0.0020708505,0.00012001049,0.00046571522,0.00024197165,0.00097580126,0.0016625863,0.009352909,0.96485525,0.00012299772],"about_ca_topic_score_codex":0.0046153953,"about_ca_topic_score_gemma":0.0068520415,"teacher_disagreement_score":0.903605,"about_ca_system_score_codex":0.0010563034,"about_ca_system_score_gemma":0.0016866344,"threshold_uncertainty_score":0.1374957},"labels":[],"label_agreement":null},{"id":"W6920697817","doi":"10.6084/m9.figshare.12486830","title":"Additional file 13 of Dynamic rewiring of the human interactome by interferon signaling","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Interactome; Interferon; Signal transduction; Human proteins; Human genome","score_opus":0.020481009819706925,"score_gpt":0.24053124633827802,"score_spread":0.22005023651857109,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6920697817","genre_codex":"dataset","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006967235,0.00041587418,0.0004239767,0.00085177034,0.0003022564,0.000078005,0.9924999,0.0008337691,0.0045249136],"genre_scores_gemma":[0.005558105,0.0024246415,0.0038529676,0.003809745,0.0008193664,0.0011507934,0.93353593,0.0025249817,0.046323534],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998789,0.00023793156,0.00017238442,0.0002762003,0.00037727016,0.00014713244],"domain_scores_gemma":[0.9753272,0.017146826,0.0012873267,0.001430097,0.003824487,0.0009840182],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0026710504,0.0011228438,0.0017752597,0.0041251983,0.00091382576,0.0031819798,0.0025332237,0.0018533989,0.9010207],"category_scores_gemma":[0.030256063,0.0007359897,0.0015508189,0.0048865485,0.00036522478,0.0036088475,0.0019146777,0.0012709801,0.32800576],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009651352,0.000007315839,0.00020390877,0.0024587663,0.0000262003,0.000033466687,0.00001859874,0.00008499412,0.00006727745,0.0006823757,0.99001116,0.006309334],"study_design_scores_gemma":[0.00065935904,0.000046620975,0.0034488323,0.0035979718,0.00010919645,0.00024907658,0.00007601964,0.00020504877,0.00033409463,0.006195821,0.9850198,0.00005816994],"about_ca_topic_score_codex":0.005175974,"about_ca_topic_score_gemma":0.0087891305,"teacher_disagreement_score":0.9010207,"about_ca_system_score_codex":0.0019179134,"about_ca_system_score_gemma":0.0028205588,"threshold_uncertainty_score":0.14118195},"labels":[],"label_agreement":null},{"id":"W6929169221","doi":"10.38709505/foo.bar","title":"DOWNLOAD [pdf]] Project Hail Mary By Andy Weir PDF Download","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Download; Popularity; Weir; Plot (graphics); Performance art; Character (mathematics); Canadian literature","score_opus":0.017785888851521145,"score_gpt":0.24161776621912598,"score_spread":0.22383187736760485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929169221","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00085253734,0.00043816696,0.001396018,0.0014463848,0.0013823906,0.00008140256,0.00086936785,0.002113476,0.99142027],"genre_scores_gemma":[0.004057316,0.00038473675,0.00084308325,0.00035147383,0.00016026288,0.000051216055,0.00059296313,0.0018137638,0.99174505],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99966776,0.0000487596,0.000008495108,0.000047787827,0.00018881843,0.00003849885],"domain_scores_gemma":[0.9994642,0.000059687325,0.000026268546,0.00007621686,0.00020311939,0.00017054101],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000403571,0.0006385886,0.00030206432,0.0006605095,0.0024542124,0.0046303486,0.00070411473,0.00094154384,0.5980597],"category_scores_gemma":[0.0019659803,0.00031863776,0.00029570016,0.0006320143,0.0005975563,0.0037631355,0.003243425,0.0020681934,0.44752055],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014035412,0.000013154657,0.000056438086,0.000063969805,0.0000011211868,0.000104438746,0.00042919026,0.000020348774,0.00023303801,0.0041145817,0.9605966,0.03435306],"study_design_scores_gemma":[0.0000021524806,0.0000061354676,0.00012242344,0.00003417207,6.273079e-7,0.00009194337,0.00018758753,0.000024135292,0.00012379957,0.0002884681,0.99911505,0.0000034919656],"about_ca_topic_score_codex":0.0016621572,"about_ca_topic_score_gemma":0.004468132,"teacher_disagreement_score":0.4019403,"about_ca_system_score_codex":0.0007627459,"about_ca_system_score_gemma":0.00073365116,"threshold_uncertainty_score":0.573319},"labels":[],"label_agreement":null},{"id":"W6929344784","doi":"10.48550/arxiv.1705.07134","title":"Jordan frame no-hair for spherical scalar-tensor black holes","year":2017,"lang":"en","type":"preprint","venue":"arXiv (Cornell University)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Bishop's University","funders":"","keywords":"Circular symmetry; Einstein; Conformal map; Symmetry (geometry); Black hole (networking); Frame (networking)","score_opus":0.06152943010428589,"score_gpt":0.21415958653461228,"score_spread":0.1526301564303264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929344784","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40832615,0.0071011037,0.33311522,0.0060264673,0.0018262317,0.00011952369,0.00043923454,0.0005257842,0.24252039],"genre_scores_gemma":[0.9476342,0.001958026,0.021288315,0.0009218618,0.0010668378,0.000087415436,0.00023444908,0.00012401179,0.026684752],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9997062,0.00008838695,0.000015283953,0.000056106615,0.00007487424,0.00005919883],"domain_scores_gemma":[0.999297,0.00018183897,0.00012797058,0.00007793107,0.00014791371,0.00016729072],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009358677,0.0005559972,0.0005823658,0.0011333089,0.0009855847,0.0013776801,0.00067249185,0.0008298509,0.004895535],"category_scores_gemma":[0.0018087451,0.0002389551,0.0006531507,0.00037280787,0.002534324,0.0021504548,0.0012317641,0.0011838423,0.0010252305],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000096592985,0.000005070152,0.000061896935,0.000022026234,0.0000025862976,0.000049984417,0.000051970215,0.00046341534,0.00074255577,0.9962941,0.00080432615,0.0014923543],"study_design_scores_gemma":[0.000007837407,0.000016356835,0.00015049774,0.000007617306,0.0000025501547,0.000060008533,0.000029256982,0.004102411,0.00026999268,0.99358326,0.0017648259,0.000005296828],"about_ca_topic_score_codex":0.00063253345,"about_ca_topic_score_gemma":0.00047619667,"teacher_disagreement_score":0.004895535,"about_ca_system_score_codex":0.00080207095,"about_ca_system_score_gemma":0.00057664694,"threshold_uncertainty_score":0.01637721},"labels":[],"label_agreement":null},{"id":"W6929416264","doi":"10.48550/arxiv.1108.4745","title":"Multiband Studies of the Optical Periodic Modulation in the X-Ray Binary SAX~J1808.4-3658 during Its Quiescence and 2008 Outburst","year":2011,"lang":"en","type":"preprint","venue":"arXiv (Cornell University)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Toronto","funders":"","keywords":"Millisecond pulsar; Amplitude; Neutron star; Light curve; Modulation (music); Pulsar; Binary number; Binary star","score_opus":0.08592192698422482,"score_gpt":0.21408540267076975,"score_spread":0.12816347568654493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929416264","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993876,0.000047276786,0.00020161169,0.000007261153,0.000001140593,0.0000025602692,0.00004072615,0.0000059199347,0.00030576938],"genre_scores_gemma":[0.9993975,0.00003791302,0.00030823203,0.0000055463934,0.00000327065,0.0000030265937,0.000102609905,0.00000290443,0.00013900355],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99996424,0.0000036234312,0.0000021464639,0.0000106204025,0.000009443388,0.000009947901],"domain_scores_gemma":[0.9998287,0.000030483336,0.00008432707,0.000008808418,0.000018229426,0.000029404744],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011030141,0.00012858084,0.00014485921,0.00041393714,0.00024695395,0.0002218553,0.00013474662,0.00016573114,0.00042666378],"category_scores_gemma":[0.00024931072,0.00013047596,0.0001292651,0.00025121265,0.0001494027,0.00017706158,0.0002218754,0.00020290665,0.00008876227],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00066682015,0.0002204611,0.67468214,0.0000912373,0.00009580508,0.0010759418,0.0008326405,0.0034925402,0.297966,0.0005417674,0.00028099582,0.020053562],"study_design_scores_gemma":[0.000007765457,0.00013738961,0.9916986,0.0000053608715,0.000017829314,0.0003108831,0.00014240961,0.0028991404,0.0041877,0.00008811688,0.0004985812,0.0000062085624],"about_ca_topic_score_codex":0.0017122005,"about_ca_topic_score_gemma":0.0051057134,"teacher_disagreement_score":0.0017122005,"about_ca_system_score_codex":0.00018944645,"about_ca_system_score_gemma":0.00007663921,"threshold_uncertainty_score":0.003404498},"labels":[],"label_agreement":null},{"id":"W6929519338","doi":"10.5061/dryad.n50st0n/1","title":"S1. Video of segmented adult T. radix skull","year":2019,"lang":"en","type":"other","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Skull; Scanner; Dragonfly; Radix (gastropod); Video recording","score_opus":0.01284752142972767,"score_gpt":0.2357260119519152,"score_spread":0.22287849052218753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929519338","genre_codex":"dataset","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.019435523,0.001200925,0.036757927,0.00089323416,0.0022316538,0.00083219004,0.7557368,0.016636193,0.16627546],"genre_scores_gemma":[0.09461585,0.0015020929,0.10392603,0.0012240589,0.00051294005,0.0018665559,0.5969916,0.00965921,0.18970177],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99988806,0.00000913985,0.000005077951,0.000033253033,0.000047295634,0.000017082328],"domain_scores_gemma":[0.99971324,0.00008559403,0.000021734053,0.00004798373,0.00006401203,0.000067442284],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003009352,0.000592752,0.00033268513,0.0010441163,0.00089705724,0.00053878076,0.0007775871,0.0007516988,0.42134312],"category_scores_gemma":[0.00071973464,0.00031669103,0.0002886334,0.00075356284,0.0002996175,0.00051377626,0.00086537685,0.00070044905,0.13442655],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048653988,0.00008744835,0.001546969,0.0007657753,0.000024073403,0.00068387546,0.0002189252,0.0008333367,0.039769407,0.002478261,0.87265676,0.0804486],"study_design_scores_gemma":[0.00006180445,0.00011704032,0.008760926,0.00021797036,0.000020880429,0.0013148547,0.00015244089,0.0011649402,0.0075262194,0.001963592,0.97865045,0.000048825925],"about_ca_topic_score_codex":0.0039162184,"about_ca_topic_score_gemma":0.014742397,"teacher_disagreement_score":0.42134312,"about_ca_system_score_codex":0.00034311548,"about_ca_system_score_gemma":0.0005334795,"threshold_uncertainty_score":0.8253838},"labels":[],"label_agreement":null},{"id":"W6929940980","doi":"10.5061/dryad.dncjsxkx7","title":"Beyond seedlings: ectomycorrhizal fungal networks and growth of mature Pseudotsuga menziesii","year":2020,"lang":"en","type":"dataset","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Alberta","funders":"","keywords":"Limiting; Windage; Nucleofection; Hyporeflexia","score_opus":0.012541679120645882,"score_gpt":0.21799060155897418,"score_spread":0.2054489224383283,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929940980","genre_codex":"empirical","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995608,0.000092123184,0.000067078145,0.000007623937,0.000001029748,0.000001850182,0.00011791143,0.0000029528119,0.0001487646],"genre_scores_gemma":[0.99945134,0.00004396086,0.00016535733,0.0000072727116,0.0000017280151,0.0000033195342,0.0001722354,0.0000014137422,0.00015334587],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999496,0.0000043087152,0.000003493779,0.000027988632,0.0000072953962,0.0000074106492],"domain_scores_gemma":[0.99973434,0.000038504826,0.00011748557,0.000010887759,0.0000376656,0.00006112977],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012218741,0.00019063786,0.000120180244,0.00040164217,0.00023032547,0.00033510916,0.0001785697,0.00016988601,0.00043721937],"category_scores_gemma":[0.0002711135,0.00011224694,0.00013296826,0.00020166261,0.0001725732,0.00043090325,0.00025168902,0.00024622015,0.00010037775],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033326782,0.00013350286,0.63724416,0.00013023081,0.000069660346,0.00033059076,0.0011887173,0.0006035432,0.34924954,0.00015981981,0.00014712314,0.010409785],"study_design_scores_gemma":[0.0000020662492,0.000047107824,0.9982692,0.0000024703293,0.0000073362066,0.00004388772,0.00011201,0.00036234508,0.0009698494,0.000022897035,0.000158509,0.00000235276],"about_ca_topic_score_codex":0.014885099,"about_ca_topic_score_gemma":0.03928223,"teacher_disagreement_score":0.014885099,"about_ca_system_score_codex":0.00052218576,"about_ca_system_score_gemma":0.0001578361,"threshold_uncertainty_score":0.029596925},"labels":[],"label_agreement":null},{"id":"W6930196152","doi":"10.5281/zenodo.12028869","title":"relay for life pdf","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Relay; Pledge; Event (particle physics); Ceremony; Power (physics); Life insurance; Power of attorney; Solid-state relay","score_opus":0.025835322168159865,"score_gpt":0.24968946067156977,"score_spread":0.2238541385034099,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930196152","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00030297393,0.00045095396,0.001668545,0.0010599728,0.002234222,0.00020125331,0.0032037727,0.007147407,0.9837308],"genre_scores_gemma":[0.0011829543,0.000313076,0.0005333582,0.00046905116,0.0003294249,0.00005513691,0.0011826119,0.0023873602,0.993547],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991891,0.00004822315,0.00003509383,0.00012046027,0.00049331365,0.00011367388],"domain_scores_gemma":[0.9965597,0.00037176098,0.000098829696,0.000427561,0.0017879993,0.0007540846],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000703997,0.0015231429,0.0010519079,0.002351108,0.002207015,0.0073529435,0.0022525406,0.0025675956,0.9394727],"category_scores_gemma":[0.0054036295,0.0008008959,0.0010441282,0.0015821402,0.0007453322,0.0077122254,0.0037641118,0.0029414669,0.91964823],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026776463,0.000021585163,0.000026628686,0.00012867381,0.0000015845847,0.000044614993,0.00004103213,0.000026184489,0.00042502227,0.0013498057,0.96510404,0.032804087],"study_design_scores_gemma":[0.000008565447,0.000013866995,0.00009585827,0.000038449478,0.0000017767027,0.000067899375,0.00004195364,0.000030076424,0.00036201035,0.00046148023,0.9988715,0.0000065931476],"about_ca_topic_score_codex":0.0020999599,"about_ca_topic_score_gemma":0.0036446254,"teacher_disagreement_score":0.060527325,"about_ca_system_score_codex":0.0013143903,"about_ca_system_score_gemma":0.0012599414,"threshold_uncertainty_score":0.086334825},"labels":[],"label_agreement":null},{"id":"W6930358110","doi":"10.5281/zenodo.11718223","title":"recruitment and selection in canada 7th edition pdf download free","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Selection (genetic algorithm); Quality (philosophy); Scope (computer science); Process (computing); Circumstantial evidence; Work (physics)","score_opus":0.026091669123355355,"score_gpt":0.23269348516795643,"score_spread":0.20660181604460107,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930358110","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011861545,0.0007259133,0.00093108375,0.006274922,0.0053189727,0.0011465799,0.024141824,0.0025542842,0.9577203],"genre_scores_gemma":[0.0013548093,0.00029456435,0.0003578056,0.00093442533,0.00013777005,0.00020678618,0.0025740552,0.00044220232,0.9936976],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9968497,0.00016713809,0.00008466318,0.00023406236,0.0017309751,0.0009335866],"domain_scores_gemma":[0.98521554,0.00037606116,0.00012571736,0.00041091515,0.008939351,0.0049324296],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0016845408,0.00088644703,0.0013959756,0.001989453,0.009024232,0.006736973,0.0025992438,0.0023674334,0.8075319],"category_scores_gemma":[0.0077563804,0.0008169529,0.00084373297,0.0035062497,0.0012269106,0.0017304594,0.0042437464,0.002472174,0.7327317],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008377855,0.0000055378096,0.00006957569,0.000024362624,5.2513724e-7,0.000010340329,0.000029193858,0.000008260288,0.00004701297,0.00025737472,0.99108595,0.008453502],"study_design_scores_gemma":[0.00000917063,0.000007950587,0.0012054038,0.00006333627,0.0000011795131,0.00001333474,0.00028773377,0.000024711091,0.000053186122,0.00013024022,0.9981925,0.000011287697],"about_ca_topic_score_codex":0.682072,"about_ca_topic_score_gemma":0.88971657,"teacher_disagreement_score":0.8075319,"about_ca_system_score_codex":0.015832948,"about_ca_system_score_gemma":0.06442548,"threshold_uncertainty_score":0.6396007},"labels":[],"label_agreement":null},{"id":"W6930404782","doi":"10.5281/zenodo.10166984","title":"Atheta (Dimetrota) districta Casey 1911","year":2023,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Natural Resources Canada; Agriculture and Agri-Food Canada; Canadian Forest Service","funders":"","keywords":"Swamp; Deciduous; Plant litter; Litter; Taiga","score_opus":0.037062493006229845,"score_gpt":0.2526922001946238,"score_spread":0.21562970718839394,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930404782","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07963758,0.020507388,0.0027304888,0.0010743324,0.0012224966,0.0006716329,0.00776659,0.000667513,0.885722],"genre_scores_gemma":[0.8530847,0.0067470684,0.0051205433,0.0014551355,0.0006499826,0.00044466543,0.0067819934,0.000119801,0.12559612],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996805,0.000025040845,0.000021700742,0.00014815587,0.00006684376,0.000057760248],"domain_scores_gemma":[0.9997087,0.000050907634,0.00011284523,0.000046676418,0.000053742522,0.0000270437],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014448054,0.0009452444,0.00063754874,0.0030456465,0.0024451634,0.0006774608,0.0010320497,0.0007770978,0.04792578],"category_scores_gemma":[0.0006942946,0.00040077246,0.00027179444,0.001983166,0.0008960445,0.0014102517,0.0018041013,0.000977878,0.013999525],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038791297,0.00019598776,0.02346847,0.0010294539,0.000109990986,0.009020761,0.0020073513,0.00066704,0.0094412705,0.012200614,0.15142502,0.790046],"study_design_scores_gemma":[0.00004779522,0.00006229144,0.08466157,0.00033544042,0.000061516825,0.0062995064,0.0009000546,0.00018982918,0.00040323008,0.0016254195,0.90539354,0.000019840316],"about_ca_topic_score_codex":0.030058818,"about_ca_topic_score_gemma":0.08233778,"teacher_disagreement_score":0.04792578,"about_ca_system_score_codex":0.0013319674,"about_ca_system_score_gemma":0.00043987628,"threshold_uncertainty_score":0.16032767},"labels":[],"label_agreement":null},{"id":"W6930456337","doi":"10.5281/zenodo.14908148","title":"Chplx — an Asynchronous Many Task Runtime Foundation for Chapel","year":2025,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Glycemic Index Laboratories","funders":"","keywords":"Chapel; Task (project management); Asynchronous communication; Code (set theory); Closing (real estate)","score_opus":0.019852258055614525,"score_gpt":0.26055731016956046,"score_spread":0.24070505211394594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930456337","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31221762,0.0009108288,0.39306837,0.0005546798,0.00042963048,0.0006606809,0.0032429916,0.25354823,0.035367046],"genre_scores_gemma":[0.5319048,0.00030385866,0.41747573,0.00031277878,0.000101171485,0.00045907614,0.005667555,0.020981401,0.022793505],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99910396,0.00013259308,0.000049061644,0.00028070092,0.0002745423,0.00015916483],"domain_scores_gemma":[0.9978853,0.0008807498,0.0001611186,0.0005387616,0.00035096958,0.00018322785],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015047565,0.0007757025,0.00037104642,0.00054133474,0.0006563153,0.0010941442,0.002028029,0.0005023906,0.0086389],"category_scores_gemma":[0.0037548856,0.00056797086,0.00057491794,0.00051344826,0.0007216109,0.0016863549,0.0021151649,0.0018322382,0.0022467074],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0064007207,0.0009890423,0.023866082,0.0024717725,0.00034673084,0.001791066,0.003183862,0.06682439,0.19341196,0.0506374,0.10265746,0.54741955],"study_design_scores_gemma":[0.0010305445,0.0016787909,0.027666464,0.0004523378,0.00018234193,0.00091143895,0.0005704107,0.44443616,0.24369067,0.025988422,0.2530314,0.00036102947],"about_ca_topic_score_codex":0.0028514587,"about_ca_topic_score_gemma":0.0043558506,"teacher_disagreement_score":0.0086389,"about_ca_system_score_codex":0.00076207134,"about_ca_system_score_gemma":0.0014582346,"threshold_uncertainty_score":0.028899968},"labels":[],"label_agreement":null},{"id":"W6930533543","doi":"10.5281/zenodo.14734616","title":"FIGURE 7 in A new fanged frog of the genus Limnonectes Fitzinger, 1843 (Anura: Dicroglossidae) from Langbian Plateau, southern Vietnam","year":2025,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Ontario Museum","funders":"","keywords":"National park; Genus; Southeast asia; Earth observation satellite; Taxonomy (biology)","score_opus":0.016091280007275856,"score_gpt":0.2227313274466827,"score_spread":0.20664004743940684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930533543","genre_codex":"empirical","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.72511524,0.0035505884,0.00851897,0.0014217774,0.0017082292,0.0010772119,0.007591333,0.0005311274,0.25048542],"genre_scores_gemma":[0.89576674,0.0013137666,0.01323192,0.0007294368,0.00011454056,0.00018601808,0.0041861874,0.000108807726,0.084362544],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99987924,0.000014288001,0.000008577311,0.000058210073,0.000019540988,0.000020124038],"domain_scores_gemma":[0.9999397,0.000010758658,0.000013535187,0.0000053659487,0.000015501173,0.00001514196],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012447864,0.00032988907,0.00018669353,0.0008887025,0.0014718875,0.00032825957,0.00038704474,0.0004907813,0.026859622],"category_scores_gemma":[0.00018452169,0.00018646012,0.00023431382,0.0006715501,0.0006962576,0.0004921183,0.0004967568,0.0006188028,0.004255654],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010664925,0.00046740007,0.23946163,0.00203799,0.0001850719,0.057798654,0.026477493,0.0013219387,0.052591532,0.0073110084,0.05188856,0.5593922],"study_design_scores_gemma":[0.00006595606,0.00042052742,0.531503,0.0005730422,0.00011932795,0.05877156,0.010989186,0.00088009954,0.0028303226,0.0011437931,0.3926236,0.00007950707],"about_ca_topic_score_codex":0.016472857,"about_ca_topic_score_gemma":0.06571105,"teacher_disagreement_score":0.026859622,"about_ca_system_score_codex":0.00037015695,"about_ca_system_score_gemma":0.00029769467,"threshold_uncertainty_score":0.08985436},"labels":[],"label_agreement":null},{"id":"W6930934055","doi":"10.5281/zenodo.15271766","title":"YanWangTF/Reference-genome-of-Zancudomyces-culisetae: Genome_Assembly_and_Annotation_Zancudomyces_culisetae","year":2025,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Process (computing); Identification (biology); Product (mathematics); Work (physics)","score_opus":0.026346412178252024,"score_gpt":0.25150592230188434,"score_spread":0.22515951012363233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930934055","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008265313,0.0039528892,0.027303718,0.00035284524,0.00060212484,0.000349118,0.8608804,0.05251317,0.04578048],"genre_scores_gemma":[0.008028198,0.0012578513,0.009004946,0.00009372171,0.00002820253,0.00021097323,0.9590586,0.0074787764,0.014838683],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99968195,0.00003400399,0.00002825964,0.0001134654,0.00008141078,0.000060954146],"domain_scores_gemma":[0.99970645,0.000055770808,0.000039192768,0.000068833026,0.00004947357,0.000080313795],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065186276,0.002785308,0.0017248368,0.0027180044,0.0012418577,0.0017236205,0.0018628954,0.0015601618,0.103661746],"category_scores_gemma":[0.00091625564,0.0011683227,0.00077332155,0.0037437663,0.00038304378,0.00087191095,0.0013429066,0.0014519197,0.14757515],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023158984,0.00014548529,0.0018683514,0.008343709,0.00022389417,0.00080007454,0.0005571277,0.00093331863,0.24299292,0.0072303605,0.64413214,0.09045671],"study_design_scores_gemma":[0.0001502461,0.00005216961,0.0027699464,0.00018254295,0.000058847545,0.00040264273,0.000049757382,0.00044398673,0.03024538,0.0006684113,0.9649264,0.000049490845],"about_ca_topic_score_codex":0.0067225276,"about_ca_topic_score_gemma":0.006642097,"teacher_disagreement_score":0.103661746,"about_ca_system_score_codex":0.0009453722,"about_ca_system_score_gemma":0.0010366302,"threshold_uncertainty_score":0.3467831},"labels":[],"label_agreement":null},{"id":"W6931113618","doi":"10.5281/zenodo.4140754","title":"VER~! Monster Hunter (2020) Película Completa HD - Unconciliable ynw","year":2020,"lang":"es","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Monster; Debitage; Anime; Instant messaging","score_opus":0.03625916413841279,"score_gpt":0.2427354099908141,"score_spread":0.20647624585240132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931113618","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005995973,0.00033223288,0.0009211272,0.0003606424,0.0010606044,0.00015738489,0.010774231,0.009552629,0.9762415],"genre_scores_gemma":[0.0019207686,0.000255642,0.0005633865,0.0001948847,0.00013802102,0.00007651019,0.0065809735,0.005116211,0.9851538],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998312,0.000010740761,0.000004278488,0.00002664969,0.000074833624,0.000052197516],"domain_scores_gemma":[0.99941134,0.000043910666,0.000014708314,0.00007627063,0.0002251336,0.00022861896],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002191581,0.00096274394,0.00043630632,0.0008349327,0.0013724936,0.0030870463,0.0009702538,0.0010547724,0.9272894],"category_scores_gemma":[0.0010276977,0.0004779545,0.00048977986,0.0006937433,0.00030787865,0.002552404,0.003247011,0.0011702469,0.86804426],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034541794,0.000009728541,0.000059215192,0.000061940744,0.0000012328388,0.000028731622,0.000055918787,0.000019502719,0.00025871187,0.00057011546,0.9787249,0.02017544],"study_design_scores_gemma":[0.000006105087,0.0000060868383,0.00028087513,0.000031463554,0.0000012309683,0.000034854394,0.000050969677,0.000023743598,0.00015160054,0.00011451467,0.9992932,0.0000052791256],"about_ca_topic_score_codex":0.00880608,"about_ca_topic_score_gemma":0.029108323,"teacher_disagreement_score":0.07271057,"about_ca_system_score_codex":0.0008319573,"about_ca_system_score_gemma":0.0005194239,"threshold_uncertainty_score":0.1037128},"labels":[],"label_agreement":null},{"id":"W6931351666","doi":"10.5281/zenodo.4128006","title":"Spontaneous (2020) Pelicula Completa — Español Latino Gratis en Línea qai","year":2020,"lang":"es","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Illusion; Entertainment; Motion picture; Entertainment industry; Film industry; Online video","score_opus":0.024018213816898813,"score_gpt":0.23920620532176268,"score_spread":0.21518799150486387,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931351666","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010440205,0.00084115565,0.00056379585,0.0014205044,0.0035107315,0.00011810085,0.011012594,0.0029734839,0.9785156],"genre_scores_gemma":[0.003872615,0.0005367011,0.00049186207,0.0004982626,0.0003871402,0.00007452413,0.006697446,0.0024480291,0.98499346],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998715,0.000010669117,0.0000034552568,0.000019577921,0.000053187403,0.000041591655],"domain_scores_gemma":[0.9996731,0.000022912687,0.000009126381,0.00003602624,0.000118940174,0.00013978084],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00028973763,0.0005557728,0.0002665676,0.00053957506,0.001492833,0.0036022796,0.00066157576,0.00076505315,0.7702979],"category_scores_gemma":[0.0005884229,0.0002442109,0.00035721422,0.0007515566,0.00027832802,0.0017987927,0.0020556452,0.0013133873,0.5683004],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026201342,0.000008373781,0.00006180958,0.00004652786,7.548862e-7,0.00003989897,0.000058140973,0.000011314932,0.00030450418,0.0009357933,0.98384315,0.014663433],"study_design_scores_gemma":[0.000005011426,0.0000037642171,0.00027026777,0.000020170657,4.3433417e-7,0.0000213846,0.000059622675,0.000007738242,0.00008327187,0.00009578275,0.9994305,0.0000020559748],"about_ca_topic_score_codex":0.006499295,"about_ca_topic_score_gemma":0.026266415,"teacher_disagreement_score":0.22970212,"about_ca_system_score_codex":0.0008425713,"about_ca_system_score_gemma":0.0007055851,"threshold_uncertainty_score":0.32764214},"labels":[],"label_agreement":null},{"id":"W6931523684","doi":"10.5281/zenodo.7373807","title":"Men's Softball World Cup 2022 Live Broadcast Free 26 November-4 DEC 2022","year":2022,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Tournament; Phone; Phone call; World War II; Coronavirus disease 2019 (COVID-19); Lift (data mining); Shot (pellet)","score_opus":0.020214544485231196,"score_gpt":0.23056126747172936,"score_spread":0.21034672298649817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931523684","genre_codex":"dataset","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.003417597,0.0011215181,0.001449912,0.0031853819,0.0130811315,0.0006154133,0.50743145,0.010203194,0.4594944],"genre_scores_gemma":[0.0049398355,0.00070023694,0.0011701554,0.0010077298,0.0014477139,0.00041512324,0.40060744,0.0023813583,0.58733046],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994419,0.00004939048,0.000026716072,0.00009875539,0.0002558771,0.00012728677],"domain_scores_gemma":[0.99849606,0.00007327912,0.00006250161,0.00013086511,0.00054061634,0.0006966229],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0009357714,0.0021107802,0.0011510809,0.0024186152,0.0019745117,0.0062756063,0.0012782539,0.0010298692,0.6143444],"category_scores_gemma":[0.0021767716,0.00048041242,0.0008346822,0.002484233,0.00034519692,0.0024116945,0.0034311574,0.0014868064,0.59994155],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048730137,0.000010118012,0.000101297774,0.00003930107,0.0000027724702,0.000009249688,0.0000068482273,0.00001793258,0.000048287693,0.0001158186,0.99486226,0.0047374056],"study_design_scores_gemma":[0.000031981454,0.00002740033,0.0024149595,0.00005834204,0.0000034986329,0.000010437093,0.00006574169,0.00012527598,0.00009975308,0.00019972137,0.99695086,0.000012040673],"about_ca_topic_score_codex":0.021842856,"about_ca_topic_score_gemma":0.095149085,"teacher_disagreement_score":0.38565558,"about_ca_system_score_codex":0.0010618273,"about_ca_system_score_gemma":0.0012921952,"threshold_uncertainty_score":0.55009085},"labels":[],"label_agreement":null},{"id":"W6939226578","doi":"10.60692/1yqms-s7551","title":"Additional file 2 of Rare predicted loss-of-function variants of type I IFN immunity genes are associated with life-threatening COVID-19","year":2023,"lang":"en","type":"article","venue":"Greater South Information System","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Table (database); Gene; Genome-wide association study; Missense mutation; Genetic association; Immunity; Single-nucleotide polymorphism; Genotype","score_opus":0.03549132383548448,"score_gpt":0.22097209765662218,"score_spread":0.1854807738211377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6939226578","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00031578017,0.000030264473,0.00031681903,0.00012208708,0.000029460694,0.00009924919,0.9982798,0.00021231838,0.00059431564],"genre_scores_gemma":[0.015948694,0.00026122387,0.0057798075,0.0013623686,0.0002271798,0.0029697882,0.96034414,0.0013829072,0.011723889],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99909616,0.00016471081,0.00018042978,0.00027479266,0.00014787735,0.00013599124],"domain_scores_gemma":[0.98184574,0.014104658,0.0011264232,0.0010877969,0.0013443199,0.00049110566],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0018414853,0.0014964737,0.0018286565,0.0021240108,0.0011890886,0.002109184,0.002394117,0.0018090938,0.8673052],"category_scores_gemma":[0.030784305,0.00075699744,0.0016093036,0.0033977923,0.00036414425,0.002030128,0.0010939019,0.0011853284,0.13071744],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001050501,0.00014663546,0.009064033,0.005827143,0.00019334185,0.0003785493,0.00012334679,0.0007185316,0.00024500958,0.0012652049,0.9673287,0.013658944],"study_design_scores_gemma":[0.021617886,0.00092723727,0.0966755,0.010352769,0.001001454,0.0034673063,0.0010502136,0.006476145,0.0021090854,0.032569654,0.8232349,0.0005179327],"about_ca_topic_score_codex":0.009301102,"about_ca_topic_score_gemma":0.014366742,"teacher_disagreement_score":0.8673052,"about_ca_system_score_codex":0.0009441615,"about_ca_system_score_gemma":0.0019517434,"threshold_uncertainty_score":0.189273},"labels":[],"label_agreement":null},{"id":"W6939274957","doi":"10.60692/jj86y-a7v37","title":"MARCH8 inhibits influenza A virus infection by targeting viral M2 protein for ubiquitination-dependent degradation in lysosomes","year":2021,"lang":"en","type":"article","venue":"Greater South Information System","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Ubiquitin; Virus; Viral replication; Influenza A virus; Lysine; Immune system; Viral matrix protein; Recombinant DNA; In vitro","score_opus":0.020804596790712813,"score_gpt":0.23304219876546467,"score_spread":0.21223760197475186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6939274957","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972656,0.0006525025,0.0005281758,0.000107880194,0.000012883997,0.0000105046265,0.000100940386,0.000041447154,0.0012801051],"genre_scores_gemma":[0.9976547,0.00022963926,0.000661911,0.000031999974,0.000007614517,0.000009337262,0.00014073664,0.0000042757665,0.0012598811],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99997056,0.000006664018,0.0000029467744,0.0000040379477,0.000006182919,0.000009521571],"domain_scores_gemma":[0.9999727,0.0000040582086,0.000008591547,0.0000037042566,0.0000034913319,0.000007511031],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000056956178,0.00015917426,0.00008901037,0.000096342264,0.00008285391,0.00010787341,0.00009273709,0.000116084266,0.0011744816],"category_scores_gemma":[0.0000844255,0.000036480345,0.000082643455,0.000037230493,0.000101861624,0.000065230706,0.00011045634,0.0001737511,0.00029641006],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032141962,0.00004796422,0.0003293492,0.000024530993,0.0000037406953,0.00003342641,0.0000066453763,0.00007080179,0.99639755,0.00007235642,0.00010492095,0.0025874188],"study_design_scores_gemma":[0.000057249505,0.0008944549,0.007604172,0.0000061884207,0.0000115676685,0.00025551862,0.000023632003,0.0014096949,0.986182,0.00008446256,0.0034682343,0.0000027975398],"about_ca_topic_score_codex":0.00025623597,"about_ca_topic_score_gemma":0.00039988098,"teacher_disagreement_score":0.0011744816,"about_ca_system_score_codex":0.00015362553,"about_ca_system_score_gemma":0.00009474932,"threshold_uncertainty_score":0.003929019},"labels":[],"label_agreement":null},{"id":"W6939290465","doi":"10.60692/djr6q-xj484","title":"Editorial: Early Events During Host Cell-Pathogen Interaction","year":2021,"lang":"en","type":"article","venue":"Greater South Information System","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Host (biology); Population; Event (particle physics)","score_opus":0.013585215144773915,"score_gpt":0.20667431801014893,"score_spread":0.193089102865375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6939290465","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00010148884,0.0021875708,0.000109295266,0.013502519,0.9820478,0.000027634698,0.00009721933,0.00007874893,0.0018477064],"genre_scores_gemma":[0.0008206701,0.0022442108,0.000088888635,0.0073401947,0.979259,0.000020615149,0.00006638635,0.000031169773,0.010128899],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974261,0.0003538567,0.0002865463,0.00039774535,0.001202581,0.0003332009],"domain_scores_gemma":[0.9904418,0.002638791,0.00069179357,0.00028735324,0.0033736601,0.0025666726],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0047785183,0.004954011,0.002896865,0.0032832187,0.0024608301,0.0059806677,0.003224611,0.011405149,0.036636002],"category_scores_gemma":[0.011354571,0.0011447596,0.0026967763,0.0009747108,0.001782977,0.0042524138,0.0014825771,0.009869478,0.02135502],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017327166,0.000024716359,0.00004465505,0.00030329087,0.000020667268,0.00018876781,0.000012385251,0.000044913446,0.00022996396,0.00031643666,0.99178314,0.0068577444],"study_design_scores_gemma":[0.00012747706,0.00010402053,0.0006745994,0.00037576378,0.00007090892,0.00044036226,0.000052616197,0.00022175709,0.00043855843,0.0010753226,0.9963875,0.000031304015],"about_ca_topic_score_codex":0.0008459633,"about_ca_topic_score_gemma":0.0017609006,"teacher_disagreement_score":0.036636002,"about_ca_system_score_codex":0.0022429116,"about_ca_system_score_gemma":0.0017660646,"threshold_uncertainty_score":0.12255961},"labels":[],"label_agreement":null},{"id":"W6939295895","doi":"10.60692/1c3xz-6k615","title":"MARCH8 inhibits influenza A virus infection by targeting viral M2 protein for ubiquitination-dependent degradation in lysosomes","year":2021,"lang":"en","type":"article","venue":"Greater South Information System","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Ubiquitin; Virus; Viral replication; Influenza A virus; Lysine; Immune system; Viral matrix protein; Recombinant DNA; In vitro","score_opus":0.020804596790712813,"score_gpt":0.23304219876546467,"score_spread":0.21223760197475186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6939295895","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972656,0.0006525025,0.0005281758,0.000107880194,0.000012883997,0.0000105046265,0.000100940386,0.000041447154,0.0012801051],"genre_scores_gemma":[0.9976547,0.00022963926,0.000661911,0.000031999974,0.000007614517,0.000009337262,0.00014073664,0.0000042757665,0.0012598811],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99997056,0.000006664018,0.0000029467744,0.0000040379477,0.000006182919,0.000009521571],"domain_scores_gemma":[0.9999727,0.0000040582086,0.000008591547,0.0000037042566,0.0000034913319,0.000007511031],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000056956178,0.00015917426,0.00008901037,0.000096342264,0.00008285391,0.00010787341,0.00009273709,0.000116084266,0.0011744816],"category_scores_gemma":[0.0000844255,0.000036480345,0.000082643455,0.000037230493,0.000101861624,0.000065230706,0.00011045634,0.0001737511,0.00029641006],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032141962,0.00004796422,0.0003293492,0.000024530993,0.0000037406953,0.00003342641,0.0000066453763,0.00007080179,0.99639755,0.00007235642,0.00010492095,0.0025874188],"study_design_scores_gemma":[0.000057249505,0.0008944549,0.007604172,0.0000061884207,0.0000115676685,0.00025551862,0.000023632003,0.0014096949,0.986182,0.00008446256,0.0034682343,0.0000027975398],"about_ca_topic_score_codex":0.00025623597,"about_ca_topic_score_gemma":0.00039988098,"teacher_disagreement_score":0.0011744816,"about_ca_system_score_codex":0.00015362553,"about_ca_system_score_gemma":0.00009474932,"threshold_uncertainty_score":0.003929019},"labels":[],"label_agreement":null},{"id":"W6939383158","doi":"10.6084/m9.figshare.12486839.v1","title":"Additional file 1 of Dynamic rewiring of the human interactome by interferon signaling","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Interactome; Interferon; Signal transduction; Human genome; Alpha interferon; Proteogenomics","score_opus":0.02060668275114582,"score_gpt":0.2391672253381548,"score_spread":0.21856054258700897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6939383158","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012705212,0.000043011496,0.00042102518,0.00008236676,0.000037623675,0.000022647899,0.9974234,0.0007282125,0.001114682],"genre_scores_gemma":[0.0044296165,0.00022565719,0.0033554928,0.00038489356,0.0000615549,0.0003766242,0.9844208,0.0014124977,0.0053330064],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991893,0.0001076861,0.00008375827,0.00027253976,0.00022423727,0.000122389],"domain_scores_gemma":[0.9915495,0.006063064,0.00036109606,0.00078619015,0.00085778756,0.00038235087],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013372417,0.0014497524,0.0014229157,0.0027133052,0.0011192902,0.002558537,0.002001439,0.0012546955,0.8234441],"category_scores_gemma":[0.013064807,0.00074697554,0.0012143007,0.003677864,0.0003668568,0.0023742036,0.0015427462,0.0013456374,0.25076145],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024617434,0.000042917538,0.0012685651,0.0024775541,0.000060679176,0.000077008604,0.000046889283,0.00050529203,0.00068542245,0.0013034545,0.9855379,0.0077480664],"study_design_scores_gemma":[0.00209347,0.0002056387,0.016297478,0.0021604428,0.00021067656,0.0007737164,0.00026495694,0.0030153973,0.003286254,0.0188017,0.95273787,0.00015237137],"about_ca_topic_score_codex":0.005115952,"about_ca_topic_score_gemma":0.010625002,"teacher_disagreement_score":0.8234441,"about_ca_system_score_codex":0.0012135977,"about_ca_system_score_gemma":0.0019619155,"threshold_uncertainty_score":0.25183547},"labels":[],"label_agreement":null},{"id":"W6939683745","doi":"10.6084/m9.figshare.28703483.v1","title":"Additional file 2 of ASFV pS183L protein negatively regulates RLR-mediated antiviral signalling by blocking MDA5 oligomerisation","year":2025,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"MDA5; Transfection; Blocking (statistics); RNA; RIG-I; Cell culture","score_opus":0.010034230304687336,"score_gpt":0.2208033939304173,"score_spread":0.21076916362572998,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6939683745","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00020325057,0.00004146815,0.0004747028,0.00011411581,0.00006140238,0.00013953788,0.99708986,0.00069701974,0.0011785491],"genre_scores_gemma":[0.0071402006,0.00028640064,0.004446637,0.00064720615,0.00012722725,0.0020525982,0.973079,0.0018649949,0.010355606],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99920136,0.00009700285,0.00013643636,0.00019636456,0.00023658975,0.00013236722],"domain_scores_gemma":[0.98816353,0.008558923,0.0006497985,0.0007187783,0.001383162,0.0005257893],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0019534002,0.0013663638,0.0021434522,0.001961429,0.0012176381,0.0025973718,0.0022274738,0.001714911,0.9137917],"category_scores_gemma":[0.02081511,0.0009583972,0.0011676685,0.003025383,0.0004024605,0.002019131,0.0011068934,0.0012014129,0.27058026],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009840084,0.0002129104,0.001713867,0.008321752,0.00009011832,0.00019499633,0.000102094455,0.00061865663,0.001309706,0.0011822948,0.9723369,0.012932716],"study_design_scores_gemma":[0.009313156,0.0009244216,0.022429986,0.0060894345,0.0002817633,0.0010180678,0.00039492964,0.0025111004,0.004399427,0.012544328,0.93981284,0.00028055403],"about_ca_topic_score_codex":0.004916768,"about_ca_topic_score_gemma":0.008102716,"teacher_disagreement_score":0.9137917,"about_ca_system_score_codex":0.0012140347,"about_ca_system_score_gemma":0.0024146114,"threshold_uncertainty_score":0.122965634},"labels":[],"label_agreement":null},{"id":"W6939794344","doi":"10.6084/m9.figshare.26599046","title":"Additional file 2 of RHAMM regulates MMTV-PyMT-induced lung metastasis by connecting STING-dependent DNA damage sensing to interferon/STAT1 pro-apoptosis signaling","year":2024,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Lawson Health Research Institute","funders":"","keywords":"DNA damage; Signal transduction; DNA; Lung cancer; Metastasis; CHEK1","score_opus":0.02567729717027713,"score_gpt":0.2626266975351795,"score_spread":0.23694940036490234,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6939794344","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00017713383,0.000035888625,0.00038912232,0.00010562971,0.000058628742,0.000057963938,0.9972479,0.0006555847,0.0012721543],"genre_scores_gemma":[0.005769302,0.00018980936,0.003273041,0.00043842004,0.00009889757,0.0007673524,0.9781944,0.0016654377,0.009603333],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99938416,0.00006993118,0.000077993194,0.00016980487,0.00019134473,0.00010672042],"domain_scores_gemma":[0.9925287,0.0048500067,0.00039189818,0.00058357674,0.0012563624,0.0003895808],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001131371,0.0013430332,0.0017023967,0.0017980036,0.001091544,0.0022447265,0.0023018213,0.0014076608,0.9070651],"category_scores_gemma":[0.012339958,0.00090895675,0.0013030085,0.0029783032,0.00030083483,0.0020330728,0.0010515181,0.0013064395,0.29401433],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052485336,0.00012741331,0.0014346174,0.0033019907,0.00005123762,0.000112651025,0.00005422124,0.0005023239,0.0009528942,0.00088003714,0.9823126,0.009745147],"study_design_scores_gemma":[0.005577282,0.0005569854,0.024969155,0.0035554885,0.00024028655,0.00085005,0.00034583698,0.0032218138,0.0061174426,0.013170348,0.9411643,0.00023105399],"about_ca_topic_score_codex":0.0054395255,"about_ca_topic_score_gemma":0.008570421,"teacher_disagreement_score":0.9070651,"about_ca_system_score_codex":0.001270216,"about_ca_system_score_gemma":0.0016872454,"threshold_uncertainty_score":0.13256037},"labels":[],"label_agreement":null},{"id":"W6939846912","doi":"10.6084/m9.figshare.29595562.v1","title":"Additional file 7 of Double vulnerability of active-NRF2 lung squamous cell carcinoma to NRF2 and TRIM24","year":2025,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Vulnerability (computing); Lung; Basal cell; Lung cancer; Cell; Carcinoma","score_opus":0.015293418393331558,"score_gpt":0.25361688498423146,"score_spread":0.2383234665908999,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6939846912","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021063253,0.000029161984,0.00021071531,0.00011235588,0.00007203467,0.000042340056,0.9975383,0.00042787762,0.0013566318],"genre_scores_gemma":[0.0084746415,0.00017644024,0.0031370714,0.0008817058,0.00017345465,0.00089198083,0.9703526,0.0015518428,0.014360299],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992823,0.00007716494,0.000092588394,0.0001801068,0.00020645723,0.00016145453],"domain_scores_gemma":[0.984539,0.010801752,0.00078684906,0.0011517078,0.00212904,0.00059173704],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011593672,0.0011976378,0.0013550803,0.0029975576,0.0007920816,0.0018795979,0.0017445253,0.0017485897,0.91972256],"category_scores_gemma":[0.017764091,0.0005879497,0.0015170506,0.0024920662,0.00033007152,0.0015278239,0.0011794043,0.0009765886,0.32758224],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004389166,0.00013681667,0.002426503,0.0021641867,0.00007663529,0.00013992193,0.00004603082,0.0003403628,0.00035621037,0.0005533614,0.9841614,0.009159598],"study_design_scores_gemma":[0.0055814767,0.00038219753,0.043799173,0.0036435402,0.00035295446,0.0013734326,0.00051246793,0.0025520495,0.0025263003,0.015542778,0.923471,0.00026276745],"about_ca_topic_score_codex":0.005539408,"about_ca_topic_score_gemma":0.010571396,"teacher_disagreement_score":0.91972256,"about_ca_system_score_codex":0.001171197,"about_ca_system_score_gemma":0.0016210311,"threshold_uncertainty_score":0.11450595},"labels":[],"label_agreement":null},{"id":"W6957702123","doi":"10.60692/k49cr-kvj07","title":"SARS-CoV-2 impairs interferon production via NSP2-induced repression of mRNA translation","year":2022,"lang":"en","type":"article","venue":"Greater South Information System","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; University of Alberta; Children's Hospital of Eastern Ontario; McGill University; Christie (Canada); University of Manitoba; Princess Margaret Cancer Centre; University of Toronto; University Health Network","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Innate immune system; Translation (biology); Messenger RNA; Interferon; Immune system; Psychological repression; RNA; Protein biosynthesis; Cytokine; Mechanism (biology)","score_opus":0.04607211759016746,"score_gpt":0.24415699991822348,"score_spread":0.19808488232805602,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6957702123","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968918,0.00048683013,0.0008838412,0.000058249017,0.000028497674,0.0000146219545,0.0002990394,0.0000492083,0.0012878191],"genre_scores_gemma":[0.9950499,0.00031535697,0.0010143023,0.0000384348,0.000008138048,0.00002474707,0.0005599977,0.000013891675,0.002975263],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986184,0.000029861927,0.000015836651,0.000021784266,0.00003855347,0.000032140913],"domain_scores_gemma":[0.9999263,0.000012640497,0.000023771809,0.000010376699,0.0000058973505,0.000021066262],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012657604,0.00041923547,0.00024323401,0.00015284133,0.00008993694,0.00022401725,0.000149601,0.00024561313,0.001462314],"category_scores_gemma":[0.000074956006,0.000114667586,0.00017235498,0.000076598226,0.0002113926,0.00017477099,0.00015818248,0.00051313214,0.00033532776],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006139185,0.000023273824,0.000056274574,0.000009416954,0.0000017564895,0.000020104662,0.0000031445652,0.000030625968,0.9995721,0.000042932545,0.000012868062,0.00016601935],"study_design_scores_gemma":[0.000014064036,0.00025568318,0.0025444978,0.0000036340352,0.000004108965,0.00010741646,0.000013584599,0.0008199499,0.9954032,0.000030759104,0.0008004156,0.000002646534],"about_ca_topic_score_codex":0.00032095888,"about_ca_topic_score_gemma":0.00045049505,"teacher_disagreement_score":0.001462314,"about_ca_system_score_codex":0.00020578282,"about_ca_system_score_gemma":0.00017029991,"threshold_uncertainty_score":0.004891932},"labels":[],"label_agreement":null},{"id":"W6957716800","doi":"10.60692/fwh19-4vj44","title":"UBXN3B positively regulates STING-mediated antiviral immune responses","year":2018,"lang":"en","type":"article","venue":"Greater South Information System","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Immune system; Vesicular stomatitis virus; Ubiquitin ligase; Sting; Virus; Herpes simplex virus; Mutation; Bystander effect; Innate immune system","score_opus":0.019973317075667005,"score_gpt":0.21943274429208925,"score_spread":0.19945942721642224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6957716800","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9911083,0.003839901,0.0019529277,0.000114975155,0.000029512887,0.0000075786616,0.00055343896,0.00008890796,0.0023044206],"genre_scores_gemma":[0.9946733,0.0011201551,0.0009184465,0.000040559215,0.0000070574297,0.000008048201,0.00043195175,0.000013922619,0.0027864908],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999138,0.000013867069,0.000008464491,0.000021816359,0.000021471184,0.000020574607],"domain_scores_gemma":[0.99994385,0.0000049343494,0.000019376808,0.000004772475,0.000005726506,0.00002123036],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000105664774,0.0002579277,0.00017120596,0.00013744477,0.00021828097,0.0002701642,0.00011113971,0.00014904114,0.002353488],"category_scores_gemma":[0.000061715014,0.00008057612,0.00013927558,0.00010684752,0.00019662423,0.00017552184,0.00021971212,0.00025806227,0.00045728893],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009999166,0.0000053726467,0.00057901343,0.000021634574,0.0000016279047,0.000042915086,0.00000775218,0.00002064927,0.99813807,0.00007899016,0.000042371372,0.0009616384],"study_design_scores_gemma":[0.00001732533,0.00011882482,0.06626237,0.000024739431,0.000018876419,0.0006175617,0.00006443614,0.0013941595,0.9263087,0.00015644931,0.0050107124,0.000005835091],"about_ca_topic_score_codex":0.0004243436,"about_ca_topic_score_gemma":0.00093656435,"teacher_disagreement_score":0.002353488,"about_ca_system_score_codex":0.00026133654,"about_ca_system_score_gemma":0.00015657934,"threshold_uncertainty_score":0.0078731775},"labels":[],"label_agreement":null},{"id":"W6958075831","doi":"10.60692/tejd0-z4246","title":"Additional file 2 of Rare predicted loss-of-function variants of type I IFN immunity genes are associated with life-threatening COVID-19","year":2023,"lang":"en","type":"article","venue":"Greater South Information System","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Table (database); Gene; Genome-wide association study; Missense mutation; Genetic association; Immunity; Single-nucleotide polymorphism; Genotype","score_opus":0.03549132383548448,"score_gpt":0.22097209765662218,"score_spread":0.1854807738211377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6958075831","genre_codex":"dataset","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00031578017,0.000030264473,0.00031681903,0.00012208708,0.000029460694,0.00009924919,0.9982798,0.00021231838,0.00059431564],"genre_scores_gemma":[0.015948694,0.00026122387,0.0057798075,0.0013623686,0.0002271798,0.0029697882,0.96034414,0.0013829072,0.011723889],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99909616,0.00016471081,0.00018042978,0.00027479266,0.00014787735,0.00013599124],"domain_scores_gemma":[0.98184574,0.014104658,0.0011264232,0.0010877969,0.0013443199,0.00049110566],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0018414853,0.0014964737,0.0018286565,0.0021240108,0.0011890886,0.002109184,0.002394117,0.0018090938,0.8673052],"category_scores_gemma":[0.030784305,0.00075699744,0.0016093036,0.0033977923,0.00036414425,0.002030128,0.0010939019,0.0011853284,0.13071744],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001050501,0.00014663546,0.009064033,0.005827143,0.00019334185,0.0003785493,0.00012334679,0.0007185316,0.00024500958,0.0012652049,0.9673287,0.013658944],"study_design_scores_gemma":[0.021617886,0.00092723727,0.0966755,0.010352769,0.001001454,0.0034673063,0.0010502136,0.006476145,0.0021090854,0.032569654,0.8232349,0.0005179327],"about_ca_topic_score_codex":0.009301102,"about_ca_topic_score_gemma":0.014366742,"teacher_disagreement_score":0.8673052,"about_ca_system_score_codex":0.0009441615,"about_ca_system_score_gemma":0.0019517434,"threshold_uncertainty_score":0.189273},"labels":[],"label_agreement":null},{"id":"W6958165292","doi":"10.6084/m9.figshare.13161564","title":"Additional file 3 of TRIM25 promotes Capicua degradation independently of ERK in the absence of ATXN1L","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; Canada's Michael Smith Genome Sciences Centre; Simon Fraser University; University of British Columbia; BC Cancer Agency","funders":"","keywords":"Western blot; Starvation; Blot; MAPK/ERK pathway; Degradation (telecommunications); Downregulation and upregulation","score_opus":0.0340503313106099,"score_gpt":0.2359413997588213,"score_spread":0.20189106844821142,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6958165292","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00020785701,0.000029944555,0.0004357547,0.00013174007,0.00006214254,0.0000627795,0.99738604,0.00081774517,0.0008659387],"genre_scores_gemma":[0.0074502,0.0001845939,0.003890076,0.0007356499,0.00013041582,0.0011281691,0.97581255,0.0019747957,0.008693511],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991573,0.00007798055,0.00012592091,0.00020134237,0.00029151444,0.00014599935],"domain_scores_gemma":[0.9915937,0.0054925545,0.0005387641,0.000631041,0.0013682235,0.00037567702],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0015100116,0.001639689,0.0018289656,0.0018174932,0.0013925949,0.0024424605,0.0023373498,0.0015917638,0.8875331],"category_scores_gemma":[0.015624525,0.00086204003,0.00123906,0.0026211732,0.0003770683,0.0021769416,0.0013861854,0.0012360498,0.24199925],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00069895346,0.000122457,0.001960946,0.0039605885,0.0000761304,0.00014126809,0.000077217126,0.00047381182,0.0010235223,0.00083530723,0.9827648,0.007865045],"study_design_scores_gemma":[0.007891491,0.00070217735,0.034160774,0.0053006867,0.00027694117,0.0011558975,0.00049855805,0.0044167144,0.008140849,0.014083198,0.92304105,0.00033163826],"about_ca_topic_score_codex":0.00680264,"about_ca_topic_score_gemma":0.011707461,"teacher_disagreement_score":0.8875331,"about_ca_system_score_codex":0.001415814,"about_ca_system_score_gemma":0.00206766,"threshold_uncertainty_score":0.16042036},"labels":[],"label_agreement":null},{"id":"W6958208956","doi":"10.6084/m9.figshare.13152379","title":"Additional file 2 of The landscape of host genetic factors involved in immune response to common viral infections","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut universitaire de cardiologie et de pneumologie de Québec","funders":"","keywords":"Host (biology); Immune system; Genome; Key (lock); Host response","score_opus":0.020020334304053762,"score_gpt":0.22949655160125718,"score_spread":0.20947621729720342,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6958208956","genre_codex":"dataset","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00014084393,0.000029541307,0.0003408001,0.00011452344,0.00004708242,0.000049630682,0.99679023,0.0006525088,0.0018349115],"genre_scores_gemma":[0.0041749803,0.00019919123,0.0034444707,0.0005696753,0.00014862214,0.0005746319,0.9748191,0.001887066,0.014182233],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99935275,0.00010222118,0.00008474135,0.0001752736,0.00017221429,0.00011283614],"domain_scores_gemma":[0.98821336,0.007813843,0.0006594273,0.00080798223,0.0019109827,0.00059430755],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0014839132,0.0011892794,0.0013445108,0.002558441,0.00096256274,0.00207881,0.0018263725,0.0010738708,0.90031564],"category_scores_gemma":[0.013700743,0.0006225224,0.00091234373,0.003792585,0.00029424878,0.002197026,0.001414428,0.0010280601,0.31109503],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002423771,0.0000578429,0.0010922204,0.0018748948,0.000031547253,0.00005232198,0.000046307825,0.00022638292,0.00028745164,0.00083409547,0.98750764,0.0077468893],"study_design_scores_gemma":[0.0015659645,0.00015075036,0.013990066,0.0016537635,0.00009803537,0.00035259008,0.00020566594,0.0007299631,0.0012602381,0.008135242,0.9717577,0.00010005785],"about_ca_topic_score_codex":0.004519685,"about_ca_topic_score_gemma":0.0064097224,"teacher_disagreement_score":0.90031564,"about_ca_system_score_codex":0.0010041996,"about_ca_system_score_gemma":0.0015376762,"threshold_uncertainty_score":0.14218754},"labels":[],"label_agreement":null},{"id":"W6968217816","doi":"10.5281/zenodo.15611545","title":"A guide to selecting high-performing antibodies for TRIM21 (UniProt ID: P19474) for use in western blot, immunoprecipitation, and immunofluorescence","year":2025,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Montreal Neurological Institute and Hospital","funders":"","keywords":"Antibody; Immunofluorescence; Protocol (science); Work (physics); Indirect immunofluorescence","score_opus":0.02261740985682385,"score_gpt":0.27909786062337716,"score_spread":0.2564804507665533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6968217816","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.013575961,0.012680892,0.69307864,0.0036601333,0.0022801487,0.012148407,0.15575214,0.061623186,0.045200527],"genre_scores_gemma":[0.008094184,0.010405725,0.72552943,0.0020096388,0.00072607165,0.016784716,0.18239939,0.013817608,0.04023324],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9955928,0.0010674943,0.0007856281,0.00061358156,0.0014519263,0.00048848754],"domain_scores_gemma":[0.9933084,0.0020481094,0.00038113416,0.0018344292,0.0018241862,0.00060368684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0059160977,0.0048600435,0.004499728,0.00884475,0.0036834877,0.0032468846,0.005913552,0.0025193468,0.11199191],"category_scores_gemma":[0.007900045,0.0061555877,0.0027408507,0.0049789967,0.0010911038,0.002139911,0.0023596147,0.005408934,0.1685525],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014037449,0.0006805088,0.0012227682,0.0030699521,0.00026386356,0.0012828565,0.00032177794,0.0007693083,0.49304977,0.0029117675,0.38854194,0.10648178],"study_design_scores_gemma":[0.00043992186,0.0007618247,0.0060569174,0.0005861391,0.00021724483,0.0047165295,0.00013569395,0.0018150681,0.11718846,0.003288885,0.86452615,0.00026715378],"about_ca_topic_score_codex":0.0019209674,"about_ca_topic_score_gemma":0.0072108596,"teacher_disagreement_score":0.11199191,"about_ca_system_score_codex":0.0009855002,"about_ca_system_score_gemma":0.0023112274,"threshold_uncertainty_score":0.37465024},"labels":[],"label_agreement":null},{"id":"W6968241734","doi":"10.5281/zenodo.15611546","title":"A guide to selecting high-performing antibodies for TRIM21 (UniProt ID: P19474) for use in western blot, immunoprecipitation, and immunofluorescence","year":2025,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Montreal Neurological Institute and Hospital","funders":"","keywords":"Antibody; Immunofluorescence; Protocol (science); Work (physics); Indirect immunofluorescence","score_opus":0.02261740985682385,"score_gpt":0.27909786062337716,"score_spread":0.2564804507665533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6968241734","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.013575961,0.012680892,0.69307864,0.0036601333,0.0022801487,0.012148407,0.15575214,0.061623186,0.045200527],"genre_scores_gemma":[0.008094184,0.010405725,0.72552943,0.0020096388,0.00072607165,0.016784716,0.18239939,0.013817608,0.04023324],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9955928,0.0010674943,0.0007856281,0.00061358156,0.0014519263,0.00048848754],"domain_scores_gemma":[0.9933084,0.0020481094,0.00038113416,0.0018344292,0.0018241862,0.00060368684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0059160977,0.0048600435,0.004499728,0.00884475,0.0036834877,0.0032468846,0.005913552,0.0025193468,0.11199191],"category_scores_gemma":[0.007900045,0.0061555877,0.0027408507,0.0049789967,0.0010911038,0.002139911,0.0023596147,0.005408934,0.1685525],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014037449,0.0006805088,0.0012227682,0.0030699521,0.00026386356,0.0012828565,0.00032177794,0.0007693083,0.49304977,0.0029117675,0.38854194,0.10648178],"study_design_scores_gemma":[0.00043992186,0.0007618247,0.0060569174,0.0005861391,0.00021724483,0.0047165295,0.00013569395,0.0018150681,0.11718846,0.003288885,0.86452615,0.00026715378],"about_ca_topic_score_codex":0.0019209674,"about_ca_topic_score_gemma":0.0072108596,"teacher_disagreement_score":0.11199191,"about_ca_system_score_codex":0.0009855002,"about_ca_system_score_gemma":0.0023112274,"threshold_uncertainty_score":0.37465024},"labels":[],"label_agreement":null},{"id":"W6968945255","doi":"10.5281/zenodo.6777175","title":"FIGURE 7 in Placobdella akahkway n. sp. (Clitellata: Hirudinea: Glossiphoniidae), a new leech species from central Canada","year":2022,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Royal Ontario Museum","funders":"","keywords":"Maximum parsimony; GenBank; Maximum likelihood; Taxon; Tree (set theory); Phylogenetic tree","score_opus":0.020178168943576817,"score_gpt":0.2106067721270866,"score_spread":0.19042860318350976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6968945255","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.782469,0.0047925697,0.0043632057,0.0009099154,0.00027159913,0.0002819176,0.023758259,0.00069641054,0.18245709],"genre_scores_gemma":[0.896088,0.0017442007,0.008234469,0.00026350902,0.000022213726,0.00007397009,0.01609375,0.00017138847,0.07730848],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99988115,0.0000038677153,0.000002951827,0.00003836049,0.000033461234,0.000040125917],"domain_scores_gemma":[0.99992704,0.0000050847684,0.000010140257,0.0000037573411,0.000030845105,0.000023103195],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006528727,0.00028573006,0.00021825891,0.0014206086,0.0021960554,0.0008091099,0.0003733832,0.00038014122,0.015456985],"category_scores_gemma":[0.00015445157,0.00015301457,0.00023022383,0.0014626231,0.000575727,0.00022970243,0.0005001666,0.00043416588,0.0036492432],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015532462,0.00013181254,0.31788662,0.0024485516,0.00018033673,0.0067922366,0.013523612,0.0013552512,0.20695299,0.004639485,0.06480521,0.3797306],"study_design_scores_gemma":[0.000025316764,0.00004375847,0.7713065,0.00032732644,0.000107579785,0.0018906598,0.008253472,0.0006944293,0.004530399,0.0003592695,0.21241945,0.000041861917],"about_ca_topic_score_codex":0.6980259,"about_ca_topic_score_gemma":0.9147803,"teacher_disagreement_score":0.30197412,"about_ca_system_score_codex":0.0028461881,"about_ca_system_score_gemma":0.0024738573,"threshold_uncertainty_score":0.60750496},"labels":[],"label_agreement":null},{"id":"W6976417439","doi":"10.60692/p2rc9-6bh28","title":"Editorial: Early Events During Host Cell-Pathogen Interaction","year":2021,"lang":"en","type":"article","venue":"Greater South Information System","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Host (biology); Population; Event (particle physics)","score_opus":0.013585215144773915,"score_gpt":0.20667431801014893,"score_spread":0.193089102865375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6976417439","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00010148884,0.0021875708,0.000109295266,0.013502519,0.9820478,0.000027634698,0.00009721933,0.00007874893,0.0018477064],"genre_scores_gemma":[0.0008206701,0.0022442108,0.000088888635,0.0073401947,0.979259,0.000020615149,0.00006638635,0.000031169773,0.010128899],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974261,0.0003538567,0.0002865463,0.00039774535,0.001202581,0.0003332009],"domain_scores_gemma":[0.9904418,0.002638791,0.00069179357,0.00028735324,0.0033736601,0.0025666726],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0047785183,0.004954011,0.002896865,0.0032832187,0.0024608301,0.0059806677,0.003224611,0.011405149,0.036636002],"category_scores_gemma":[0.011354571,0.0011447596,0.0026967763,0.0009747108,0.001782977,0.0042524138,0.0014825771,0.009869478,0.02135502],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017327166,0.000024716359,0.00004465505,0.00030329087,0.000020667268,0.00018876781,0.000012385251,0.000044913446,0.00022996396,0.00031643666,0.99178314,0.0068577444],"study_design_scores_gemma":[0.00012747706,0.00010402053,0.0006745994,0.00037576378,0.00007090892,0.00044036226,0.000052616197,0.00022175709,0.00043855843,0.0010753226,0.9963875,0.000031304015],"about_ca_topic_score_codex":0.0008459633,"about_ca_topic_score_gemma":0.0017609006,"teacher_disagreement_score":0.036636002,"about_ca_system_score_codex":0.0022429116,"about_ca_system_score_gemma":0.0017660646,"threshold_uncertainty_score":0.12255961},"labels":[],"label_agreement":null},{"id":"W6976738138","doi":"10.6084/m9.figshare.13161570.v1","title":"Additional file 5 of TRIM25 promotes Capicua degradation independently of ERK in the absence of ATXN1L","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; Canada's Michael Smith Genome Sciences Centre; Simon Fraser University; University of British Columbia; BC Cancer Agency","funders":"","keywords":"Immunofluorescence; Western blot; Ligation; Immunoprecipitation; Proximity ligation assay; Blot; MAPK/ERK pathway","score_opus":0.034061863465703265,"score_gpt":0.23609561675556065,"score_spread":0.2020337532898574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6976738138","genre_codex":"dataset","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00039328935,0.000066507506,0.00049426826,0.0002078797,0.00014928315,0.00018564596,0.99642724,0.0008934581,0.0011823986],"genre_scores_gemma":[0.012636511,0.0004891018,0.007821112,0.001593649,0.00025559738,0.0033891732,0.95615315,0.002771401,0.014890321],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989573,0.00008252977,0.00016598956,0.00026315046,0.00034718774,0.00018392566],"domain_scores_gemma":[0.99110454,0.005634995,0.0006848325,0.0005263181,0.0015879415,0.00046143125],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0016473313,0.0024058793,0.0029210406,0.002010676,0.0019595276,0.0032762757,0.0028524622,0.0023187513,0.89937055],"category_scores_gemma":[0.018300097,0.0013560149,0.002051212,0.003111853,0.0005174897,0.0029353146,0.0015672193,0.0017178025,0.2044963],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016227227,0.00024348294,0.0030933293,0.012492073,0.00015911071,0.00042978334,0.0001825019,0.00086764124,0.002820605,0.0012893814,0.9663817,0.010417675],"study_design_scores_gemma":[0.019150378,0.0017142921,0.046374913,0.010872813,0.0005016132,0.002197059,0.0009040623,0.006614434,0.010871222,0.014714255,0.8854757,0.0006091303],"about_ca_topic_score_codex":0.009566878,"about_ca_topic_score_gemma":0.015083469,"teacher_disagreement_score":0.89937055,"about_ca_system_score_codex":0.0017350024,"about_ca_system_score_gemma":0.0028130582,"threshold_uncertainty_score":0.14353561},"labels":[],"label_agreement":null},{"id":"W6976959974","doi":"10.6084/m9.figshare.14167690","title":"Additional file 2 of STAU2 protein level is controlled by caspases and the CHK1 pathway and regulates cell cycle progression in the non-transformed hTERT-RPE1 cells","year":2021,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"HeLa; Small hairpin RNA; Cell cycle; Apoptosis; Cell; Caspase; CHEK1; Cell cycle progression","score_opus":0.009996639618861618,"score_gpt":0.21203778803927262,"score_spread":0.202041148420411,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6976959974","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00038932427,0.000037547274,0.0006951147,0.00013587593,0.00007093585,0.00007543215,0.9961947,0.0013248891,0.0010761871],"genre_scores_gemma":[0.008396746,0.00017355927,0.004776259,0.0004804549,0.00009651225,0.0009976809,0.9732843,0.002053972,0.009740511],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994293,0.000045035682,0.000083256455,0.00013989102,0.00019574795,0.00010678469],"domain_scores_gemma":[0.9938613,0.003821522,0.00043645687,0.0004965203,0.0010376626,0.00034652246],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010467512,0.0011845051,0.0016475337,0.0018383904,0.0011781473,0.0018839848,0.0020964395,0.0015388328,0.85945284],"category_scores_gemma":[0.009936418,0.0008221842,0.0009816913,0.0027120898,0.00031393775,0.0016678879,0.0010367067,0.0011680417,0.21496727],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009119878,0.00020765596,0.002279897,0.0052127717,0.00008026277,0.0002623981,0.00010685462,0.000542704,0.003359277,0.0010757326,0.9726461,0.0133142555],"study_design_scores_gemma":[0.005275512,0.0006841032,0.03489532,0.0036162785,0.00022397278,0.001421413,0.00040689073,0.003558394,0.011958808,0.010138198,0.92749774,0.00032330916],"about_ca_topic_score_codex":0.004344543,"about_ca_topic_score_gemma":0.007962338,"teacher_disagreement_score":0.85945284,"about_ca_system_score_codex":0.0011539414,"about_ca_system_score_gemma":0.0015939896,"threshold_uncertainty_score":0.20047337},"labels":[],"label_agreement":null},{"id":"W6977034040","doi":"10.6084/m9.figshare.29595559.v1","title":"Additional file 6 of Double vulnerability of active-NRF2 lung squamous cell carcinoma to NRF2 and TRIM24","year":2025,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Vulnerability (computing); Lung; Basal cell; Lung cancer; Carcinoma; Cell; Perspective (graphical)","score_opus":0.015267629694749906,"score_gpt":0.25352086853064104,"score_spread":0.23825323883589114,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6977034040","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021457879,0.000028850884,0.00023395204,0.00010584793,0.00006974257,0.00004306085,0.9975332,0.00043582774,0.0013349549],"genre_scores_gemma":[0.008756809,0.0001761495,0.0035037692,0.0008367947,0.00016360231,0.0008916255,0.9698379,0.0015957976,0.014237573],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99932706,0.00007324003,0.00008949386,0.00017499003,0.00018965955,0.00014557796],"domain_scores_gemma":[0.9862335,0.009539854,0.0007243563,0.0010939009,0.0018503774,0.0005579766],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011570867,0.0011654849,0.0013115985,0.0028986435,0.0007708506,0.0018437611,0.0016521126,0.0016684263,0.91638994],"category_scores_gemma":[0.016868638,0.00057579647,0.0014535049,0.0024002793,0.0003154339,0.0014988226,0.0010999725,0.00096984894,0.316563],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048479167,0.00015060362,0.0026421063,0.0023316273,0.00008125293,0.00015516751,0.00005321318,0.0003884496,0.00042264748,0.00060291914,0.98254675,0.01014057],"study_design_scores_gemma":[0.0054160575,0.00038046698,0.044229835,0.0032864746,0.00033986912,0.0013819879,0.0004890355,0.0024793847,0.0025376345,0.014567081,0.92463726,0.00025489906],"about_ca_topic_score_codex":0.0052579883,"about_ca_topic_score_gemma":0.0099811,"teacher_disagreement_score":0.91638994,"about_ca_system_score_codex":0.0010713612,"about_ca_system_score_gemma":0.0014869926,"threshold_uncertainty_score":0.119259536},"labels":[],"label_agreement":null},{"id":"W6977148397","doi":"10.6084/m9.figshare.13161564.v1","title":"Additional file 3 of TRIM25 promotes Capicua degradation independently of ERK in the absence of ATXN1L","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; Canada's Michael Smith Genome Sciences Centre; Simon Fraser University; University of British Columbia; BC Cancer Agency","funders":"","keywords":"Western blot; Starvation; Blot; MAPK/ERK pathway; Degradation (telecommunications); Downregulation and upregulation","score_opus":0.0340503313106099,"score_gpt":0.2359413997588213,"score_spread":0.20189106844821142,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6977148397","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00020785701,0.000029944555,0.0004357547,0.00013174007,0.00006214254,0.0000627795,0.99738604,0.00081774517,0.0008659387],"genre_scores_gemma":[0.0074502,0.0001845939,0.003890076,0.0007356499,0.00013041582,0.0011281691,0.97581255,0.0019747957,0.008693511],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991573,0.00007798055,0.00012592091,0.00020134237,0.00029151444,0.00014599935],"domain_scores_gemma":[0.9915937,0.0054925545,0.0005387641,0.000631041,0.0013682235,0.00037567702],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0015100116,0.001639689,0.0018289656,0.0018174932,0.0013925949,0.0024424605,0.0023373498,0.0015917638,0.8875331],"category_scores_gemma":[0.015624525,0.00086204003,0.00123906,0.0026211732,0.0003770683,0.0021769416,0.0013861854,0.0012360498,0.24199925],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00069895346,0.000122457,0.001960946,0.0039605885,0.0000761304,0.00014126809,0.000077217126,0.00047381182,0.0010235223,0.00083530723,0.9827648,0.007865045],"study_design_scores_gemma":[0.007891491,0.00070217735,0.034160774,0.0053006867,0.00027694117,0.0011558975,0.00049855805,0.0044167144,0.008140849,0.014083198,0.92304105,0.00033163826],"about_ca_topic_score_codex":0.00680264,"about_ca_topic_score_gemma":0.011707461,"teacher_disagreement_score":0.8875331,"about_ca_system_score_codex":0.001415814,"about_ca_system_score_gemma":0.00206766,"threshold_uncertainty_score":0.16042036},"labels":[],"label_agreement":null},{"id":"W6977248238","doi":"10.6084/m9.figshare.13152379.v1","title":"Additional file 2 of The landscape of host genetic factors involved in immune response to common viral infections","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut universitaire de cardiologie et de pneumologie de Québec","funders":"","keywords":"Host (biology); Immune system; Genome; Key (lock); Host response","score_opus":0.020020334304053762,"score_gpt":0.22949655160125718,"score_spread":0.20947621729720342,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6977248238","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00014084393,0.000029541307,0.0003408001,0.00011452344,0.00004708242,0.000049630682,0.99679023,0.0006525088,0.0018349115],"genre_scores_gemma":[0.0041749803,0.00019919123,0.0034444707,0.0005696753,0.00014862214,0.0005746319,0.9748191,0.001887066,0.014182233],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99935275,0.00010222118,0.00008474135,0.0001752736,0.00017221429,0.00011283614],"domain_scores_gemma":[0.98821336,0.007813843,0.0006594273,0.00080798223,0.0019109827,0.00059430755],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0014839132,0.0011892794,0.0013445108,0.002558441,0.00096256274,0.00207881,0.0018263725,0.0010738708,0.90031564],"category_scores_gemma":[0.013700743,0.0006225224,0.00091234373,0.003792585,0.00029424878,0.002197026,0.001414428,0.0010280601,0.31109503],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002423771,0.0000578429,0.0010922204,0.0018748948,0.000031547253,0.00005232198,0.000046307825,0.00022638292,0.00028745164,0.00083409547,0.98750764,0.0077468893],"study_design_scores_gemma":[0.0015659645,0.00015075036,0.013990066,0.0016537635,0.00009803537,0.00035259008,0.00020566594,0.0007299631,0.0012602381,0.008135242,0.9717577,0.00010005785],"about_ca_topic_score_codex":0.004519685,"about_ca_topic_score_gemma":0.0064097224,"teacher_disagreement_score":0.90031564,"about_ca_system_score_codex":0.0010041996,"about_ca_system_score_gemma":0.0015376762,"threshold_uncertainty_score":0.14218754},"labels":[],"label_agreement":null},{"id":"W6977286670","doi":"10.6084/m9.figshare.28703480","title":"Additional file 1 of ASFV pS183L protein negatively regulates RLR-mediated antiviral signalling by blocking MDA5 oligomerisation","year":2025,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Transactivation; HEK 293 cells; Blocking (statistics); Luciferase; ORFS; Signalling","score_opus":0.01038985470725997,"score_gpt":0.2212761693874155,"score_spread":0.21088631468015553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6977286670","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00019677386,0.0000335124,0.0004044295,0.000082674924,0.000040916475,0.000098985074,0.99772197,0.0005182158,0.0009025588],"genre_scores_gemma":[0.0055518597,0.00022777432,0.0032713625,0.00042360503,0.00008974884,0.0014290026,0.97979856,0.0011721156,0.008035975],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993481,0.000089152105,0.00011087247,0.00016268532,0.00018542589,0.00010379243],"domain_scores_gemma":[0.9891567,0.0077864383,0.0006161886,0.0006898271,0.0012953213,0.00045548912],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0017625114,0.0012183111,0.0017997717,0.0018125009,0.0010853518,0.0020618103,0.0019608652,0.0013198175,0.8931898],"category_scores_gemma":[0.017625801,0.0008364142,0.0009456741,0.0031112686,0.0003158004,0.0015941951,0.0008982406,0.0010761126,0.26809227],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00077299605,0.00022039874,0.0016557049,0.004849274,0.00006514433,0.00013192189,0.000076392396,0.0005528723,0.0009404607,0.00084901013,0.97709537,0.01279035],"study_design_scores_gemma":[0.0077612703,0.0009279562,0.023389902,0.0043655206,0.0002564275,0.00089136226,0.00034080562,0.0024377601,0.004326839,0.010706814,0.9443579,0.00023752653],"about_ca_topic_score_codex":0.0049883677,"about_ca_topic_score_gemma":0.008219829,"teacher_disagreement_score":0.8931898,"about_ca_system_score_codex":0.001096541,"about_ca_system_score_gemma":0.0020711026,"threshold_uncertainty_score":0.15235174},"labels":[],"label_agreement":null},{"id":"W6977317447","doi":"10.6084/m9.figshare.28703486","title":"Additional file 3 of ASFV pS183L protein negatively regulates RLR-mediated antiviral signalling by blocking MDA5 oligomerisation","year":2025,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Blocking (statistics); HEK 293 cells; MDA5; Cell culture; Signalling; Antibody; Block (permutation group theory)","score_opus":0.010207681343165964,"score_gpt":0.22094691675341133,"score_spread":0.21073923541024536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6977317447","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00019803028,0.000028458995,0.00039679647,0.00009978502,0.00005735141,0.00011394362,0.9970799,0.00068199076,0.0013437174],"genre_scores_gemma":[0.006402887,0.00020460268,0.0034211248,0.0004897634,0.000114764916,0.0014816932,0.97539175,0.0018441606,0.010649148],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991161,0.00009937886,0.00015733717,0.00018525541,0.00028720323,0.0001547281],"domain_scores_gemma":[0.9876792,0.008507686,0.00067113957,0.00080624886,0.0017637305,0.0005720916],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001967301,0.0014294112,0.0020902029,0.002011122,0.0012313325,0.0023256694,0.002190613,0.0014884858,0.9227339],"category_scores_gemma":[0.02272264,0.0008683876,0.0011470857,0.003207376,0.00038344602,0.0019981605,0.001172192,0.0010803291,0.29540247],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008905716,0.00018669754,0.0017001639,0.004932189,0.00007288555,0.00017435316,0.00008524273,0.0004925655,0.0010122916,0.0009005269,0.97839844,0.011154064],"study_design_scores_gemma":[0.007189331,0.0007549041,0.022106783,0.004712393,0.0002160234,0.0009232724,0.00036175022,0.002142908,0.004091403,0.009707274,0.9475667,0.00022732108],"about_ca_topic_score_codex":0.0061530825,"about_ca_topic_score_gemma":0.009124051,"teacher_disagreement_score":0.9227339,"about_ca_system_score_codex":0.0012190035,"about_ca_system_score_gemma":0.0021704528,"threshold_uncertainty_score":0.11021066},"labels":[],"label_agreement":null},{"id":"W6977425759","doi":"10.6084/m9.figshare.13161537","title":"Additional file 11 of TRIM25 promotes Capicua degradation independently of ERK in the absence of ATXN1L","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; Canada's Michael Smith Genome Sciences Centre; Simon Fraser University; University of British Columbia; BC Cancer Agency","funders":"","keywords":"Downregulation and upregulation; MAPK/ERK pathway; Cell; Cell culture; Gene; Cell growth; Signal transduction; Transfection","score_opus":0.035260020363521785,"score_gpt":0.23853600955079232,"score_spread":0.20327598918727052,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6977425759","genre_codex":"dataset","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000279466,0.000033613192,0.00027200257,0.000101386104,0.00005740461,0.000056254048,0.9978344,0.000759484,0.00060598867],"genre_scores_gemma":[0.0071180537,0.00019290275,0.003779463,0.00056279014,0.00009778959,0.0009710242,0.97912794,0.0012746714,0.006875471],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99937516,0.000047787285,0.000078390985,0.0001807554,0.00018757931,0.00013030403],"domain_scores_gemma":[0.9947549,0.0032082305,0.00042826057,0.00038734847,0.0008904529,0.0003308221],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010113386,0.0014969719,0.0022452627,0.0019471045,0.0013333592,0.0020027396,0.0021627715,0.0016069792,0.858069],"category_scores_gemma":[0.00797015,0.0008480557,0.0014644314,0.0028931045,0.00031278515,0.0018736111,0.001104305,0.0011726421,0.19105728],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011852424,0.00021921363,0.0028399252,0.006220098,0.00011917166,0.0002065594,0.00009991904,0.0006486066,0.0024891712,0.000789661,0.97462124,0.010561156],"study_design_scores_gemma":[0.012566739,0.0011849392,0.070138335,0.006258255,0.00042136014,0.0015837711,0.00073165254,0.0056452146,0.013397057,0.013832545,0.8737221,0.00051809696],"about_ca_topic_score_codex":0.0067413137,"about_ca_topic_score_gemma":0.011813655,"teacher_disagreement_score":0.858069,"about_ca_system_score_codex":0.0012839882,"about_ca_system_score_gemma":0.0018021651,"threshold_uncertainty_score":0.20244735},"labels":[],"label_agreement":null},{"id":"W6977637518","doi":"10.6084/m9.figshare.13161570","title":"Additional file 5 of TRIM25 promotes Capicua degradation independently of ERK in the absence of ATXN1L","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; Canada's Michael Smith Genome Sciences Centre; Simon Fraser University; University of British Columbia; BC Cancer Agency","funders":"","keywords":"Immunofluorescence; Western blot; Ligation; Immunoprecipitation; Proximity ligation assay; Blot; MAPK/ERK pathway","score_opus":0.034061863465703265,"score_gpt":0.23609561675556065,"score_spread":0.2020337532898574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6977637518","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00039328935,0.000066507506,0.00049426826,0.0002078797,0.00014928315,0.00018564596,0.99642724,0.0008934581,0.0011823986],"genre_scores_gemma":[0.012636511,0.0004891018,0.007821112,0.001593649,0.00025559738,0.0033891732,0.95615315,0.002771401,0.014890321],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989573,0.00008252977,0.00016598956,0.00026315046,0.00034718774,0.00018392566],"domain_scores_gemma":[0.99110454,0.005634995,0.0006848325,0.0005263181,0.0015879415,0.00046143125],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0016473313,0.0024058793,0.0029210406,0.002010676,0.0019595276,0.0032762757,0.0028524622,0.0023187513,0.89937055],"category_scores_gemma":[0.018300097,0.0013560149,0.002051212,0.003111853,0.0005174897,0.0029353146,0.0015672193,0.0017178025,0.2044963],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016227227,0.00024348294,0.0030933293,0.012492073,0.00015911071,0.00042978334,0.0001825019,0.00086764124,0.002820605,0.0012893814,0.9663817,0.010417675],"study_design_scores_gemma":[0.019150378,0.0017142921,0.046374913,0.010872813,0.0005016132,0.002197059,0.0009040623,0.006614434,0.010871222,0.014714255,0.8854757,0.0006091303],"about_ca_topic_score_codex":0.009566878,"about_ca_topic_score_gemma":0.015083469,"teacher_disagreement_score":0.89937055,"about_ca_system_score_codex":0.0017350024,"about_ca_system_score_gemma":0.0028130582,"threshold_uncertainty_score":0.14353561},"labels":[],"label_agreement":null},{"id":"W6989947436","doi":"","title":"The characterization of Vig-1’s expression patterns in IPNV-infected, or dsRNA-treated, rainbow trout cells","year":2024,"lang":"en","type":"article","venue":"Scholars Commons (Wilfrid Laurier University)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Rainbow trout; Trout; Innate immune system; Immune system; Interferon; Infectious hematopoietic necrosis virus; Gene expression; Gene","score_opus":0.009532382777567188,"score_gpt":0.2146819869496431,"score_spread":0.20514960417207592,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6989947436","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98965293,0.0006178473,0.004799318,0.0000992386,0.000047851096,0.000057553658,0.0018949214,0.0000702263,0.002760204],"genre_scores_gemma":[0.97234803,0.00085715216,0.006361928,0.0001311813,0.000019460387,0.00018026338,0.0065310053,0.000044190103,0.013526816],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984384,0.000009347673,0.00001475878,0.000047871108,0.000049254475,0.00003495271],"domain_scores_gemma":[0.99992216,0.000015422942,0.000016167945,0.000011375288,0.00002112814,0.00001370334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001074652,0.00015389734,0.00017332386,0.000217644,0.00021486192,0.00028624455,0.00016269668,0.00018501922,0.0011595141],"category_scores_gemma":[0.00010038417,0.00010827255,0.0003027352,0.00026734333,0.000188411,0.00019932979,0.00017502214,0.00063128705,0.0006320459],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024354858,0.000013647005,0.0005017539,0.000012592514,0.0000014210053,0.000018991946,0.0000393493,0.000021252696,0.9988846,0.000044181015,0.000022979819,0.00041480543],"study_design_scores_gemma":[0.000012667513,0.0003633813,0.051213298,0.000009747726,0.00001920123,0.00022873998,0.0002985654,0.0014060125,0.94194514,0.00006105194,0.0044298572,0.000012356666],"about_ca_topic_score_codex":0.002213179,"about_ca_topic_score_gemma":0.0032695464,"teacher_disagreement_score":0.002213179,"about_ca_system_score_codex":0.00040243956,"about_ca_system_score_gemma":0.00023973713,"threshold_uncertainty_score":0.004400611},"labels":[],"label_agreement":null},{"id":"W6996158443","doi":"","title":"REGULATION OF NUCLEAR RIG-I MEDIATED INTERFERON SIGNALING BY DUSP11 DURING INFLUENZA A VIRUS INFECTION","year":2024,"lang":"en","type":"dissertation","venue":"University Library (University of Saskatchewan)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Innate immune system; RIG-I; Influenza A virus; MDA5; RNA virus; Interferon; Pattern recognition receptor; RNA; Virus","score_opus":0.005123888508783887,"score_gpt":0.17620400125117694,"score_spread":0.17108011274239304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6996158443","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98718345,0.0063865697,0.0021393208,0.00037057133,0.000109887995,0.0000343439,0.000647094,0.00009811389,0.0030306363],"genre_scores_gemma":[0.9955843,0.0013879071,0.0007734939,0.00013289672,0.000011879267,0.000035179688,0.00057907245,0.000008482413,0.001486806],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980897,0.000035023764,0.000013989379,0.000038041075,0.000037001642,0.000067072666],"domain_scores_gemma":[0.99990976,0.00001074638,0.000023295277,0.000007910217,0.00001863695,0.000029748096],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019081973,0.00021880858,0.0002186995,0.00015643382,0.00021226733,0.00035538882,0.0001983674,0.00031065257,0.0012389744],"category_scores_gemma":[0.00017424602,0.0001402471,0.00030449804,0.00011085087,0.00027003806,0.0002924,0.0003501696,0.00054857385,0.00046225887],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039375768,0.000035117035,0.0012280884,0.000102067585,0.0000081117005,0.00012340312,0.000063454914,0.000101426194,0.9944758,0.00025086282,0.00024478766,0.0029732268],"study_design_scores_gemma":[0.00012474979,0.0006093881,0.09150338,0.000067602356,0.000040921026,0.0006875695,0.0005638056,0.008903956,0.8836221,0.0005625651,0.013272361,0.000041681506],"about_ca_topic_score_codex":0.0006885752,"about_ca_topic_score_gemma":0.0011039764,"teacher_disagreement_score":0.0012389744,"about_ca_system_score_codex":0.00043265685,"about_ca_system_score_gemma":0.000233995,"threshold_uncertainty_score":0.004144788},"labels":[],"label_agreement":null},{"id":"W6999982991","doi":"","title":"Effect of cell-specific ablation of Interferon regulatory factor 1 on defenses against mycobacterial infections","year":2025,"lang":"en","type":"dissertation","venue":"eScholarship@McGill (McGill)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Interferon; Ablation; Immune system; Cytokine; IRF1; Interferon regulatory factors","score_opus":0.009801053804896964,"score_gpt":0.23615869783256083,"score_spread":0.22635764402766387,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6999982991","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99381953,0.0016860387,0.0006749582,0.0002813745,0.00011782789,0.000026487052,0.00023802638,0.00007473058,0.0030809792],"genre_scores_gemma":[0.99187756,0.0011342042,0.0007760453,0.00018020028,0.000048317885,0.000026954089,0.00036084297,0.00004401001,0.0055518933],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998467,0.000024787998,0.000007604853,0.000026163822,0.000029316512,0.00006534536],"domain_scores_gemma":[0.99975556,0.00009806446,0.00003907362,0.000020556448,0.000014109685,0.000072692485],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018980753,0.00033454993,0.00036958363,0.00019300418,0.0002025481,0.00038765476,0.0003188365,0.0003712214,0.002981526],"category_scores_gemma":[0.00022291185,0.00014643883,0.0002130754,0.000101779086,0.00030754186,0.00014928904,0.00020421832,0.0009567355,0.0006268561],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015252634,0.00013389564,0.0001953353,0.00003281645,0.000011605567,0.00006518319,0.000020019357,0.00023302004,0.9929597,0.0001751589,0.00018467469,0.004463365],"study_design_scores_gemma":[0.00023226436,0.0019049807,0.0049426095,0.000017639459,0.000048036163,0.00020211659,0.00006967219,0.0008939686,0.9870756,0.00013328956,0.004466528,0.000013249777],"about_ca_topic_score_codex":0.0006705914,"about_ca_topic_score_gemma":0.0010280086,"teacher_disagreement_score":0.002981526,"about_ca_system_score_codex":0.00021088246,"about_ca_system_score_gemma":0.000316717,"threshold_uncertainty_score":0.009974182},"labels":[],"label_agreement":null},{"id":"W7011427935","doi":"","title":"The lRF8 and lRF1 genes as important regulators of immune response to mycobacteria and bone metabolism","year":2015,"lang":"en","type":"dissertation","venue":"eScholarship@McGill (McGill)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; Medical Research Council; Canadian Institutes of Health Research; Institut National de la Santé et de la Recherche Médicale; European Commission; Agence Nationale de la Recherche; Wellcome Trust; McGill University; March of Dimes Foundation; St. Giles Foundation; Leukaemia and Lymphoma Research; National Institutes of Health","keywords":"Immune system; Downregulation and upregulation; IRF8; Gene; Peripheral blood mononuclear cell; Transcription factor; Mutation; Regulation of gene expression; IRF1","score_opus":0.009082862755294767,"score_gpt":0.2455808888100845,"score_spread":0.23649802605478973,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7011427935","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9704359,0.022193773,0.0028755267,0.0003130201,0.000051482173,0.00002796137,0.0006400678,0.00011449215,0.0033478641],"genre_scores_gemma":[0.98358375,0.006000373,0.0034835865,0.00009537565,0.000048384572,0.000048249978,0.00086252036,0.000017675493,0.005860059],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998871,0.000017021752,0.0000055286205,0.00002760322,0.00003730394,0.00002542455],"domain_scores_gemma":[0.99993014,0.000009787765,0.000033111326,0.00000354066,0.000011699572,0.000011701089],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016047066,0.00037822823,0.0002848298,0.00030343764,0.0001396314,0.00028860423,0.00021894068,0.00033385976,0.0012513489],"category_scores_gemma":[0.00014934543,0.00006799591,0.00020463039,0.00013365991,0.00017831194,0.00017136554,0.0001449222,0.0002503051,0.0003505226],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005437319,0.000031325886,0.006158796,0.00018781,0.00002279911,0.0013193868,0.00009791109,0.00025632887,0.9601185,0.00058563263,0.00036251545,0.03031521],"study_design_scores_gemma":[0.00008952729,0.0009795927,0.20693803,0.00011843767,0.000092061644,0.013550385,0.0003492832,0.0019940883,0.7280872,0.001154272,0.04660876,0.000038413145],"about_ca_topic_score_codex":0.00029842043,"about_ca_topic_score_gemma":0.00026367462,"teacher_disagreement_score":0.0012513489,"about_ca_system_score_codex":0.00029863615,"about_ca_system_score_gemma":0.00012540662,"threshold_uncertainty_score":0.0041861534},"labels":[],"label_agreement":null},{"id":"W7024578352","doi":"","title":"The structure of IFIT proteins and their recognition of viral RNA","year":2017,"lang":"en","type":"dissertation","venue":"eScholarship@McGill (McGill)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Research Council Canada; Canadian Institutes of Health Research; Österreichischen Akademie der Wissenschaften; Western Economic Diversification Canada; Natural Sciences and Engineering Research Council of Canada; Canadian Light Source","keywords":"RNA; Tetratricopeptide; Effector; Interferon; RNA silencing; Antiviral protein; Gene; Innate immune system; RNA-binding protein; RNA interference","score_opus":0.013415330011541226,"score_gpt":0.23573537759844615,"score_spread":0.22232004758690493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7024578352","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91344804,0.037205853,0.028200487,0.0021802217,0.00035323718,0.00011945186,0.0013730319,0.00032090105,0.016798787],"genre_scores_gemma":[0.9691891,0.0061083497,0.01647086,0.00028311388,0.000088710076,0.00008452836,0.002122181,0.000016935282,0.0056362343],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988604,0.000013483071,0.0000058777423,0.000023999892,0.00004781714,0.000022876691],"domain_scores_gemma":[0.99993324,0.000010957986,0.00002465415,0.0000050810095,0.000012326246,0.000013753492],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011885199,0.00030639843,0.00016811168,0.00015688779,0.00026784517,0.0003409063,0.0003403865,0.0005864688,0.0017010544],"category_scores_gemma":[0.00034976623,0.0001141866,0.00024802855,0.00017455549,0.00032236183,0.0003753858,0.00022887366,0.0007099498,0.00060022937],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003971943,0.00005778461,0.0044178474,0.0003797938,0.000028798679,0.0011384143,0.00014417148,0.0024891482,0.9223053,0.012547949,0.0031125026,0.0529811],"study_design_scores_gemma":[0.00007974747,0.00035731762,0.028455013,0.000091056834,0.000032170505,0.0037644578,0.00022277662,0.009372898,0.8445575,0.0068961503,0.10612315,0.000047693742],"about_ca_topic_score_codex":0.00086906226,"about_ca_topic_score_gemma":0.00064741675,"teacher_disagreement_score":0.0017010544,"about_ca_system_score_codex":0.00048450238,"about_ca_system_score_gemma":0.00032967844,"threshold_uncertainty_score":0.0056905746},"labels":[],"label_agreement":null},{"id":"W7028623233","doi":"","title":"Functional characterization of a novel ENU-induced mutation in Unc93b1 and its role in single-stranded RNA virus infection","year":2014,"lang":"en","type":"dissertation","venue":"eScholarship@McGill (McGill)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; McGill University Health Centre; McGill University","keywords":"Mutation; RNA; Virus; Mutant","score_opus":0.020469819138512084,"score_gpt":0.23378225631906305,"score_spread":0.21331243718055096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7028623233","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99398625,0.00056879764,0.003652265,0.00011024132,0.00003769426,0.000049988048,0.0009091259,0.00009229411,0.0005934015],"genre_scores_gemma":[0.9943321,0.00035099758,0.0023298112,0.000058287646,0.000008352126,0.000045769655,0.0012552349,0.00007475422,0.0015447834],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997435,0.0000432255,0.00003810674,0.00005390948,0.000078735065,0.00004248175],"domain_scores_gemma":[0.9997099,0.000056068046,0.000113617454,0.000030304245,0.000024170906,0.00006596911],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016776596,0.0005135312,0.00027733942,0.0003947225,0.00019570006,0.0002813865,0.00035278365,0.0005838013,0.0011649915],"category_scores_gemma":[0.00028315515,0.0001960697,0.00042569824,0.00024607373,0.00031182286,0.00015214543,0.00026237112,0.0006937023,0.00054417126],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002916715,0.00001819278,0.000095527204,0.000011501486,0.000004352871,0.000110310866,0.000009440063,0.000044972847,0.99934155,0.00004677471,0.000010283726,0.00027786044],"study_design_scores_gemma":[0.000011894689,0.00024573127,0.0071251094,0.000011443527,0.00002719786,0.0011777219,0.000039706665,0.0011904811,0.988325,0.000048147813,0.0017875416,0.000009964967],"about_ca_topic_score_codex":0.0010325399,"about_ca_topic_score_gemma":0.0008815508,"teacher_disagreement_score":0.0011649915,"about_ca_system_score_codex":0.0002725888,"about_ca_system_score_gemma":0.000121555335,"threshold_uncertainty_score":0.0038973093},"labels":[],"label_agreement":null},{"id":"W7030446844","doi":"","title":"Nidovirus papain-like proteases: structural insight into substrate recognition and innate immune suppression","year":2013,"lang":"en","type":"dissertation","venue":"Mspace (University of Manitoba)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Innate immune system; Proteases; Deubiquitinating enzyme; Protease; Ubiquitin; Arterivirus; Immune system; Enzyme","score_opus":0.013245749213422893,"score_gpt":0.20812267434250203,"score_spread":0.19487692512907914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7030446844","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47870806,0.43524855,0.051895205,0.005827215,0.0006570228,0.00009341503,0.00052548037,0.0004013053,0.026643801],"genre_scores_gemma":[0.8706859,0.10621389,0.015057585,0.00074812147,0.00027210807,0.000039618822,0.00034706903,0.000024338064,0.0066113793],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999941,0.000009069515,0.0000031086852,0.000014312941,0.00001646015,0.000016113741],"domain_scores_gemma":[0.9999709,0.000005762809,0.0000064134706,0.0000026587545,0.000004895639,0.000009340377],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018854866,0.000407001,0.00029413067,0.00018834292,0.0001333015,0.0004956354,0.00040292938,0.00043436437,0.00075111166],"category_scores_gemma":[0.000086480104,0.00014180699,0.00021157447,0.00014788048,0.00038557992,0.00083516305,0.0002593936,0.00086024584,0.00025546367],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00056683,0.00023882728,0.0014411077,0.0013247782,0.000060060953,0.0010445813,0.00019628504,0.0040014894,0.85019207,0.049836133,0.0027754975,0.08832223],"study_design_scores_gemma":[0.00020787065,0.0013073793,0.010188865,0.00027965172,0.00010918584,0.005685478,0.00043558035,0.049607385,0.62728995,0.081968226,0.22279957,0.00012087477],"about_ca_topic_score_codex":0.0002755987,"about_ca_topic_score_gemma":0.00029965577,"teacher_disagreement_score":0.00075111166,"about_ca_system_score_codex":0.00049678877,"about_ca_system_score_gemma":0.00023939658,"threshold_uncertainty_score":0.0036044717},"labels":[],"label_agreement":null},{"id":"W7034281582","doi":"","title":"SymCon'04: THE 4TH INTERNATIONAL WORKSHOP &#13;\\nON SYMMETRY AND CONSTRAINT SATISFACTION PROBLEMS . A Satellite Workshop of CP'2004 (Tenth International Conference on Principles and Practice of Constraint Programming) . 27 September 2004 , Toronto, Canada.","year":2004,"lang":"en","type":"other","venue":"Archivio istituzionale della ricerca (Alma Mater Studiorum Università di Bologna)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Constraint satisfaction problem; Symmetry (geometry); Constraint (computer-aided design); Homogeneous space; Constraint programming; Transformation (genetics); Constraint satisfaction; Local consistency","score_opus":0.017491443499505856,"score_gpt":0.24489660078708023,"score_spread":0.22740515728757438,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7034281582","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008577004,0.049227588,0.754303,0.04468029,0.013566366,0.0010273719,0.0046512797,0.005876567,0.11809051],"genre_scores_gemma":[0.03275759,0.048233304,0.6360313,0.010602679,0.006398681,0.0014930636,0.027818177,0.007603452,0.2290616],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99249697,0.0030943053,0.00043757635,0.0012436827,0.0021959224,0.0005315764],"domain_scores_gemma":[0.98946893,0.0058476417,0.00035349873,0.0014233133,0.001883585,0.0010229708],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.009093343,0.0035954313,0.0031199637,0.002008486,0.0022526402,0.008634887,0.0063282084,0.0041329297,0.06583344],"category_scores_gemma":[0.011584164,0.002611182,0.0033953858,0.004043057,0.0031860538,0.010138918,0.005119562,0.009033016,0.019771006],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026112582,0.00043647576,0.0005143906,0.0006557344,0.00012921623,0.00040353226,0.00027462433,0.006759595,0.0012846085,0.046267185,0.67452717,0.26848638],"study_design_scores_gemma":[0.00016961226,0.00015584087,0.0010792388,0.0007093986,0.00006261008,0.0007823257,0.00044367416,0.048037335,0.0024234245,0.12163432,0.82443017,0.000072135685],"about_ca_topic_score_codex":0.012774669,"about_ca_topic_score_gemma":0.02356912,"teacher_disagreement_score":0.06583344,"about_ca_system_score_codex":0.004961007,"about_ca_system_score_gemma":0.0071621607,"threshold_uncertainty_score":0.22023481},"labels":[],"label_agreement":null},{"id":"W7037960149","doi":"","title":"Equity in Canadian Postpartum Care Practices","year":2023,"lang":"en","type":"article","venue":"Scholarship@Western (Western University)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"","score_opus":0.1218238070444892,"score_gpt":0.37207776820032323,"score_spread":0.25025396115583404,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7037960149","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8824702,0.0064837653,0.0003382889,0.057943717,0.00030071024,0.00013040892,0.0012352769,0.000021132391,0.051076543],"genre_scores_gemma":[0.9947966,0.00076074526,0.00010483561,0.0016898682,0.000031844276,0.000017971626,0.000090920475,0.000004869819,0.0025023792],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9890827,0.001381112,0.00030975355,0.0006525057,0.0023446037,0.0062293652],"domain_scores_gemma":[0.9760597,0.0034434744,0.0022433854,0.0005393308,0.0055821086,0.012132096],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0043384503,0.00022231099,0.0004832899,0.002271734,0.014069287,0.0048539774,0.0026147831,0.0022347867,0.010953454],"category_scores_gemma":[0.02237824,0.00041756747,0.00050574355,0.0051639252,0.0037548481,0.001491486,0.004284482,0.0027753594,0.00019187554],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002710804,0.00034742,0.7632064,0.0002568161,0.00009502069,0.0008281192,0.05581112,0.00054800813,0.0002430925,0.05658764,0.026264733,0.095540434],"study_design_scores_gemma":[0.000047727357,0.0001299551,0.85584044,0.0008739312,0.000056578483,0.0004196102,0.081959665,0.0008915348,0.00016890523,0.0063894745,0.05313266,0.00008960135],"about_ca_topic_score_codex":0.9871869,"about_ca_topic_score_gemma":0.9921616,"teacher_disagreement_score":0.11565693,"about_ca_system_score_codex":0.11565693,"about_ca_system_score_gemma":0.16701193,"threshold_uncertainty_score":0.83915365},"labels":[],"label_agreement":null},{"id":"W7038221486","doi":"","title":"Identificaiton and characterization of the antitumor suppressor activity of interferon regulatory factor 3 (IRF-3) in B16 melanoma tumor model","year":2003,"lang":"en","type":"dissertation","venue":"eScholarship@McGill (McGill)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Immunogenicity; Melanoma; Cytokine; Immunotherapy; Immune system; Interferon; Suppressor; Cancer immunotherapy; Epitope","score_opus":0.013040506168538317,"score_gpt":0.22884370533229056,"score_spread":0.21580319916375224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7038221486","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9890638,0.0012303315,0.0046911705,0.00021311232,0.00006532786,0.000068625515,0.0007711251,0.00008461975,0.0038118458],"genre_scores_gemma":[0.9618298,0.0016445882,0.0069170087,0.00017052016,0.000018347633,0.000155262,0.0021719476,0.000041417272,0.027051138],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999249,0.000008157135,0.000005245255,0.000014271003,0.00002396841,0.000023455155],"domain_scores_gemma":[0.9999604,0.0000058865608,0.000006930966,0.0000072116013,0.000008602757,0.000011009591],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017862862,0.00020256257,0.00017553773,0.00026238963,0.00017938424,0.00022653349,0.0001382881,0.00025809673,0.0023382874],"category_scores_gemma":[0.00006633044,0.000091031274,0.0003862447,0.00011145885,0.00009705422,0.00015323621,0.00010344177,0.00060485606,0.0007673498],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007975873,0.000051305906,0.0001312884,0.00001713252,0.0000015963759,0.000020077243,0.000012375908,0.000030467081,0.998483,0.000050395924,0.000058745878,0.0010638849],"study_design_scores_gemma":[0.00003926031,0.0007626678,0.0051658847,0.000009415997,0.000017509503,0.0002036733,0.000055570785,0.0010583082,0.988932,0.00008048605,0.00367023,0.000004814696],"about_ca_topic_score_codex":0.0008963396,"about_ca_topic_score_gemma":0.0014180291,"teacher_disagreement_score":0.0023382874,"about_ca_system_score_codex":0.00018680144,"about_ca_system_score_gemma":0.00020569768,"threshold_uncertainty_score":0.007822335},"labels":[],"label_agreement":null},{"id":"W7066287195","doi":"","title":"At Guelph Volume 30 Number 17, May 1, 1986","year":2017,"lang":"en","type":"other","venue":"The Atrium (University of Guelph)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Ministry of Natural Resources","keywords":"","score_opus":0.014047970899626477,"score_gpt":0.22793294247635376,"score_spread":0.21388497157672728,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7066287195","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0034413082,0.0047953697,0.00027427488,0.0053101648,0.004848433,0.00011881806,0.0015119729,0.00072324823,0.9789764],"genre_scores_gemma":[0.0012225132,0.0009822897,0.00008294802,0.0003923252,0.00019040646,0.000007811118,0.0001751033,0.000064543514,0.9968822],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99957687,0.00004702262,0.000015913549,0.00008039265,0.00016000448,0.00011970488],"domain_scores_gemma":[0.99918085,0.0001836324,0.000025039477,0.00007223053,0.00019997692,0.00033829274],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00055612787,0.0015776189,0.00071834354,0.0018343506,0.0026616936,0.0026377686,0.0010903749,0.0023422397,0.5370721],"category_scores_gemma":[0.0016328939,0.0006355552,0.00059997226,0.0013969037,0.0013491901,0.0011315471,0.0013707549,0.002354281,0.36293614],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015011212,0.00007786348,0.000527058,0.00020573816,0.00001023277,0.00031705765,0.00012781569,0.0001335489,0.00050326914,0.0033335323,0.9446423,0.049971484],"study_design_scores_gemma":[0.000019265046,0.000030147086,0.0021860984,0.00020288333,0.000009973247,0.000119510674,0.00008699041,0.000064501124,0.00028877723,0.0004235858,0.9965591,0.000009140906],"about_ca_topic_score_codex":0.028091975,"about_ca_topic_score_gemma":0.18342043,"teacher_disagreement_score":0.46292788,"about_ca_system_score_codex":0.0032478587,"about_ca_system_score_gemma":0.002068787,"threshold_uncertainty_score":0.6603104},"labels":[],"label_agreement":null},{"id":"W7071131150","doi":"","title":"The role of mitochondria in innate immunity","year":2019,"lang":"en","type":"dissertation","venue":"eScholarship@McGill (McGill)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"","score_opus":0.007821184989116358,"score_gpt":0.23138531268708284,"score_spread":0.2235641276979665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7071131150","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.050563127,0.42069522,0.0035535344,0.12821105,0.010555507,0.00009021305,0.0005723917,0.00019468946,0.3855642],"genre_scores_gemma":[0.16135414,0.18017048,0.002154765,0.0046377676,0.0028503586,0.00006466974,0.00021912069,0.00006014113,0.6484885],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982697,0.000022629607,0.0000025181562,0.000037727004,0.00006626109,0.000043963377],"domain_scores_gemma":[0.9996824,0.00005323915,0.000017418455,0.000010200346,0.00007573393,0.00016090328],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006653154,0.00020514769,0.00020827077,0.0002871181,0.0008006575,0.0013352602,0.00030854656,0.0006673778,0.02124349],"category_scores_gemma":[0.00043884135,0.0001336403,0.00008821371,0.00018255624,0.00051309523,0.00071631663,0.0006613409,0.0013572979,0.0037828975],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064591976,0.00015931016,0.0013988811,0.00093601336,0.000019073359,0.00026200982,0.0016010735,0.000315742,0.042919964,0.08021593,0.42088574,0.45064035],"study_design_scores_gemma":[0.000021637235,0.00008509717,0.004940536,0.0003027275,0.000007290505,0.00011357944,0.0005929471,0.000115309325,0.005626474,0.008828224,0.9793497,0.00001654289],"about_ca_topic_score_codex":0.004151039,"about_ca_topic_score_gemma":0.007842658,"teacher_disagreement_score":0.02124349,"about_ca_system_score_codex":0.00092056836,"about_ca_system_score_gemma":0.0014277746,"threshold_uncertainty_score":0.07106656},"labels":[],"label_agreement":null},{"id":"W7071991377","doi":"","title":"Type I IFN and the impact of translation in the antiviral innate immunity: a 4EHP story","year":2023,"lang":"en","type":"dissertation","venue":"eScholarship@McGill (McGill)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research","funders":"","keywords":"Innate immune system; Translation (biology); Interferon; DNA; Interferon type I; Alpha interferon","score_opus":0.02220491018894984,"score_gpt":0.281175027628777,"score_spread":0.2589701174398272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7071991377","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011376752,0.6153735,0.0021129488,0.31685132,0.01087694,0.000012837933,0.00021983548,0.00005473651,0.043121196],"genre_scores_gemma":[0.13807416,0.63610286,0.0034546102,0.097913064,0.020665864,0.00007369202,0.00024798512,0.00012284762,0.10334487],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99946207,0.00016595787,0.000016190772,0.00006769511,0.00015833514,0.00012976573],"domain_scores_gemma":[0.99881625,0.0007224292,0.000066077046,0.000090137204,0.00014059395,0.00016444921],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029249303,0.0005439436,0.0008913357,0.00046411724,0.0007350476,0.0037897397,0.00050887535,0.0027684513,0.010298089],"category_scores_gemma":[0.0016987361,0.00021906449,0.000491174,0.00048212052,0.0031919791,0.004790145,0.0021406238,0.0059715435,0.0021423877],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011568088,0.00021490813,0.0011492874,0.0007846871,0.00010803534,0.00062979717,0.0009980274,0.0011010802,0.018242484,0.30109295,0.20438237,0.47013956],"study_design_scores_gemma":[0.000059298673,0.00013407432,0.001976532,0.0006480984,0.00002696023,0.00016688158,0.0007804628,0.00036934545,0.004333397,0.13710418,0.8543662,0.000034557783],"about_ca_topic_score_codex":0.0016682858,"about_ca_topic_score_gemma":0.0027206088,"teacher_disagreement_score":0.010298089,"about_ca_system_score_codex":0.001555647,"about_ca_system_score_gemma":0.0015548622,"threshold_uncertainty_score":0.03445059},"labels":[],"label_agreement":null},{"id":"W7087293852","doi":"10.14288/1.0450331","title":"Willingness to use drug checking within future supervised injection services among people who inject drugs in a mid-sized Canadian city","year":2025,"lang":"en","type":"article","venue":"Open Collections","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Logistic regression; Odds; Drug; Odds ratio; Injection drug use; Willingness to pay; Service (business); Public health","score_opus":0.008689779901847893,"score_gpt":0.2440593009010063,"score_spread":0.23536952099915842,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7087293852","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957048,0.00018560851,0.000042986925,0.0007982116,0.000019179488,0.00004163631,0.00054598186,0.000003839521,0.0026576063],"genre_scores_gemma":[0.9972939,0.00024967972,0.00008192709,0.0004918101,0.000011252805,0.000015334273,0.00021000614,0.0000044103194,0.0016415886],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986092,0.0001089697,0.000058754093,0.00012986314,0.00033582625,0.00075729325],"domain_scores_gemma":[0.9972873,0.0001487289,0.00055351894,0.000052589836,0.0007254259,0.0012324444],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061085686,0.000331308,0.0005001859,0.001319002,0.007663104,0.0026840894,0.0018947491,0.0011794149,0.004940683],"category_scores_gemma":[0.0018882089,0.0006146638,0.00092906837,0.0028731658,0.0017429414,0.0009610088,0.0014769898,0.002906692,0.0003895734],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003713133,0.0001592361,0.98899966,0.000021401895,0.000027790116,0.00015477955,0.006897386,0.000032800235,0.00011916386,0.0001209661,0.0011384264,0.0022912815],"study_design_scores_gemma":[0.0000046991054,0.000039987674,0.9584344,0.00007146905,0.000023157727,0.0001004554,0.039972488,0.00018382772,0.00003696355,0.000036787784,0.0010683453,0.000027433267],"about_ca_topic_score_codex":0.98560274,"about_ca_topic_score_gemma":0.9935179,"teacher_disagreement_score":0.016794305,"about_ca_system_score_codex":0.016794305,"about_ca_system_score_gemma":0.022058576,"threshold_uncertainty_score":0.1218518},"labels":[],"label_agreement":null},{"id":"W7099284778","doi":"","title":"ARTICLE","year":2016,"lang":"en","type":"article","venue":"","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Guideline; Medical prescription; Regimen; Clinical Practice; Antibiotics; Incidence (geometry); Antibiotic therapy; Health care","score_opus":0.00909235187732295,"score_gpt":0.22709750472234672,"score_spread":0.21800515284502375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7099284778","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.005006362,0.00840142,0.0021101274,0.0312986,0.014952432,0.00023449706,0.0042164153,0.0010257093,0.9327544],"genre_scores_gemma":[0.03161381,0.009855321,0.0015958793,0.011066726,0.0056765024,0.00016150752,0.004684336,0.00041120814,0.93493456],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99897826,0.00015163256,0.000062266925,0.0002385579,0.00040063824,0.0001687359],"domain_scores_gemma":[0.9982786,0.00023634962,0.00013842393,0.00017680932,0.0006221967,0.0005477315],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008615017,0.0006238715,0.00044016988,0.0011038876,0.0014381956,0.0044027227,0.0013861854,0.002286565,0.52439564],"category_scores_gemma":[0.0036246877,0.00019908135,0.00040004592,0.0011643077,0.00076059846,0.0023719661,0.0026465005,0.0015974789,0.2774454],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000090966736,0.0001093006,0.0016091649,0.00047300992,0.0000099323115,0.0005061123,0.00035652806,0.00007781287,0.0004908951,0.01466342,0.7511793,0.23043358],"study_design_scores_gemma":[0.000009120333,0.000024153214,0.00085643324,0.00017597168,0.0000030131446,0.00032089872,0.0001567543,0.00003333913,0.00010263535,0.0015893481,0.99672383,0.000004474859],"about_ca_topic_score_codex":0.0022939295,"about_ca_topic_score_gemma":0.0025527123,"teacher_disagreement_score":0.47560436,"about_ca_system_score_codex":0.0015120843,"about_ca_system_score_gemma":0.0029429176,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W7116204116","doi":"10.64898/2025.12.16.694702","title":"STING–IFN–CH25H lipid axis links innate immune activation to tau pathology","year":2025,"lang":"en","type":"article","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Innate immune system; Neurodegeneration; Oxysterol; Signal transduction; Apoptosis; Immune system; Lipid signaling; Lipid metabolism; Mitochondrion; Downregulation and upregulation","score_opus":0.00854149768681394,"score_gpt":0.22459711485747524,"score_spread":0.2160556171706613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7116204116","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916306,0.00363451,0.0019943423,0.0002858044,0.000039618466,0.000016784716,0.00033906384,0.000094407056,0.0019649616],"genre_scores_gemma":[0.9967871,0.0010985662,0.0007090628,0.000057150104,0.000015336744,0.00000860617,0.0001490947,0.0000057362045,0.0011693207],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999193,0.000012279495,0.0000068236072,0.000018866818,0.000019024914,0.000023682533],"domain_scores_gemma":[0.9999504,0.000002777316,0.000021500246,0.0000049370224,0.0000054041125,0.000015108656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014888233,0.00038729166,0.0001633807,0.0002957873,0.00018255711,0.0002943652,0.000093363,0.00024515434,0.0010548191],"category_scores_gemma":[0.000066048364,0.00009026524,0.00015221203,0.0000965875,0.0003486194,0.00016775812,0.00021193345,0.0004990527,0.0001688072],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003684446,0.000021555914,0.0022014477,0.000043230342,0.0000141901755,0.00019696346,0.00003275082,0.00013263476,0.9908009,0.00045857896,0.00013349437,0.0055958945],"study_design_scores_gemma":[0.000045554374,0.0004547592,0.05281831,0.000046942816,0.000079711586,0.00096825813,0.00015475605,0.0025493107,0.9357883,0.0012993959,0.005781069,0.000013626683],"about_ca_topic_score_codex":0.0006226259,"about_ca_topic_score_gemma":0.0011772834,"teacher_disagreement_score":0.0010548191,"about_ca_system_score_codex":0.0004238108,"about_ca_system_score_gemma":0.000285396,"threshold_uncertainty_score":0.0035287142},"labels":[],"label_agreement":null},{"id":"W7116987910","doi":"10.1007/s13402-025-01150-w","title":"PARP7 and aryl hydrocarbon receptor differentially regulate mammary cancer cell proliferation and STING-induced type I interferon signalling","year":2025,"lang":"en","type":"article","venue":"Cellular Oncology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Universitetet i Oslo","keywords":"Aryl hydrocarbon receptor; Cell growth; Signalling; Cell culture; Signalling pathways; Cancer cell lines; Interferon; Receptor; Signal transduction","score_opus":0.013640235727282037,"score_gpt":0.2590991002092376,"score_spread":0.24545886448195556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7116987910","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98846227,0.006410328,0.0015469972,0.00016035284,0.000046061312,0.000028317372,0.00072673487,0.000051314735,0.0025676277],"genre_scores_gemma":[0.9913259,0.0022729672,0.00084217056,0.00008107092,0.00001550839,0.00004487412,0.0013228144,0.00001357358,0.0040811272],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997552,0.000040574363,0.000019321893,0.000043543387,0.000074641845,0.000066739376],"domain_scores_gemma":[0.99989545,0.00001155969,0.000038960676,0.000011858247,0.000014371431,0.000027681535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011968175,0.0002813409,0.00025521292,0.00020801337,0.00016460133,0.00040596604,0.00020548303,0.00032710118,0.0036172608],"category_scores_gemma":[0.000108901586,0.00012332706,0.00035106187,0.00025005132,0.00019881674,0.00027244122,0.00020881458,0.00052555726,0.0010057354],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031671385,0.000045721652,0.0005777202,0.000064383115,0.000010779547,0.00009590038,0.000017764844,0.00005566493,0.996366,0.0001071021,0.00008344907,0.0022588167],"study_design_scores_gemma":[0.000043458745,0.00080194074,0.027885947,0.000017387021,0.000048340276,0.0007540221,0.00014248474,0.0010219744,0.96310675,0.00007766889,0.006091499,0.0000083861205],"about_ca_topic_score_codex":0.00025751957,"about_ca_topic_score_gemma":0.00037901636,"teacher_disagreement_score":0.0036172608,"about_ca_system_score_codex":0.00030990946,"about_ca_system_score_gemma":0.00018030114,"threshold_uncertainty_score":0.012100935},"labels":[],"label_agreement":null},{"id":"W7133044667","doi":"","title":"ORP3 Promotes ALPK1-TIFA Dependent NF-κB Activation upon Detection of Bacterial Heptose Phosphate containing Metabolites","year":2022,"lang":"","type":"dissertation","venue":"TSpace","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Amgen (Canada)","funders":"","keywords":"HEK 293 cells; Innate immune system; Transfection; Cytosol; Cell culture; Receptor; Signal transduction; Luciferase; Immune system; Monoclonal antibody","score_opus":0.013907174733797732,"score_gpt":0.2972257843630458,"score_spread":0.2833186096292481,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7133044667","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9750621,0.002162531,0.0064920676,0.00074230245,0.00010692091,0.00008718869,0.0015504403,0.00022829685,0.013568135],"genre_scores_gemma":[0.97236854,0.0017438793,0.003573955,0.0002651285,0.000022494245,0.00011450952,0.001640192,0.00006033957,0.020210978],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993026,0.000006556085,0.000003911615,0.000015963262,0.000018347757,0.000024960207],"domain_scores_gemma":[0.99996424,0.0000056153885,0.000008254991,0.0000031278973,0.000005237608,0.000013532215],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007633433,0.0002398684,0.00012108253,0.00010361651,0.0001564483,0.00021672396,0.00012699107,0.00017193232,0.003697556],"category_scores_gemma":[0.000059249043,0.000084955194,0.0002744345,0.00010015536,0.000120857134,0.00011409083,0.00020855355,0.0005670619,0.00136047],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000121721525,0.000021596632,0.00006956701,0.000023526552,0.000001256261,0.00003494741,0.000011471143,0.00002211032,0.99870884,0.000053972457,0.00012647564,0.0008044615],"study_design_scores_gemma":[0.000024702445,0.00012228337,0.004829791,0.000013706264,0.000005036269,0.00010513704,0.00004915714,0.0004426329,0.99052,0.00009462049,0.0037900212,0.00000287913],"about_ca_topic_score_codex":0.00068992446,"about_ca_topic_score_gemma":0.0012270678,"teacher_disagreement_score":0.003697556,"about_ca_system_score_codex":0.00025248577,"about_ca_system_score_gemma":0.0002513588,"threshold_uncertainty_score":0.0123695135},"labels":[],"label_agreement":null},{"id":"W79741725","doi":"10.1007/978-3-662-10356-2_12","title":"Virus-Induced Autoimmune Reactions in the CNS","year":2001,"lang":"en","type":"review","venue":"Current topics in microbiology and immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital; Institut National de la Recherche Scientifique","funders":"","keywords":"Etiology; Virus; Medicine; Dementia; Disease; Immune system; Immunology; Central nervous system; Neurologic disease; Human immunodeficiency virus (HIV); Pathology; Internal medicine","score_opus":0.06424661430337973,"score_gpt":0.34470129125135035,"score_spread":0.2804546769479706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W79741725","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00034987807,0.9975331,0.00020105053,0.00025706907,0.00067355466,0.000003848879,0.00000846841,0.000008329006,0.0009647572],"genre_scores_gemma":[0.0014377396,0.9959764,0.00016228262,0.00026891896,0.0012315054,0.000005873203,0.000018480423,0.0000012927949,0.00089751714],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998042,0.00003719563,0.00003344475,0.000034083252,0.000066503875,0.000024568028],"domain_scores_gemma":[0.9996296,0.00016154193,0.000065938904,0.000014115619,0.000086250235,0.00004257108],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006869687,0.0010842392,0.0019042107,0.0014735177,0.00026805978,0.0011117609,0.0012421287,0.0018348509,0.0018618486],"category_scores_gemma":[0.0005901623,0.0002581068,0.0003643995,0.001411078,0.0005007512,0.001366075,0.0004415239,0.0015464629,0.0015077586],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026501034,0.00012255562,0.0004736672,0.010902007,0.00008620447,0.0024767413,0.000055268967,0.00044290084,0.0048635374,0.0022776762,0.033487298,0.9445471],"study_design_scores_gemma":[0.00015357723,0.00040935108,0.0037336822,0.004645685,0.0003279972,0.01996691,0.00016873628,0.00038496772,0.0028857067,0.005148282,0.9621258,0.000049357175],"about_ca_topic_score_codex":0.00085432,"about_ca_topic_score_gemma":0.0016116357,"teacher_disagreement_score":0.0019042107,"about_ca_system_score_codex":0.0006282943,"about_ca_system_score_gemma":0.0007092205,"threshold_uncertainty_score":0.0062285066},"labels":[],"label_agreement":null},{"id":"W87783018","doi":"10.1096/fasebj.22.1_supplement.479.1","title":"Cardiac effects of pulmonary influenza A viral infection","year":2008,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Medicine; Nasal administration; Cardiac function curve; Saline; Influenza A virus; Internal medicine; Tumor necrosis factor alpha; Phosphorylation; p38 mitogen-activated protein kinases; Immunology; Endocrinology; Virus; Cardiology; MAPK/ERK pathway; Heart failure; Biology","score_opus":0.01170108017271857,"score_gpt":0.2373115411935104,"score_spread":0.22561046102079182,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W87783018","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98852473,0.0057918467,0.0010147984,0.00018945301,0.00009576102,0.00018509153,0.0003159766,0.000052863386,0.0038293235],"genre_scores_gemma":[0.99563485,0.0021104792,0.00074289856,0.00015774643,0.000075023185,0.00011322471,0.00021000099,0.000004139562,0.0009514834],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998764,0.000033405468,0.000008215918,0.000021645626,0.00002244378,0.000037863134],"domain_scores_gemma":[0.9998424,0.000028521112,0.000047077923,0.000014516941,0.000013784202,0.000053568965],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022382168,0.00043044484,0.00023749801,0.00013573327,0.00017509909,0.00024088206,0.0001818901,0.00032535053,0.0016370525],"category_scores_gemma":[0.00014925803,0.00008988241,0.00016676358,0.00006568908,0.00041171172,0.00010689948,0.00022139844,0.000666058,0.00026251073],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025773344,0.00061167544,0.014009111,0.00039005876,0.000034653258,0.0010990242,0.000033835284,0.0001756615,0.9693904,0.00027240426,0.00037837838,0.01102746],"study_design_scores_gemma":[0.0006011201,0.04376972,0.56453407,0.00027071591,0.00018898134,0.008640438,0.00036495327,0.0026141864,0.36999115,0.00044305727,0.008546052,0.000035525307],"about_ca_topic_score_codex":0.00048825884,"about_ca_topic_score_gemma":0.0006393328,"teacher_disagreement_score":0.0016370525,"about_ca_system_score_codex":0.00024789613,"about_ca_system_score_gemma":0.00022058889,"threshold_uncertainty_score":0.0054764748},"labels":[],"label_agreement":null},{"id":"W892349900","doi":"","title":"The Role of Vsx1 in Type 7 ON Cone Bipolar Cell Development","year":2008,"lang":"en","type":"article","venue":"Investigative Ophthalmology & Visual Science","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Cone (formal languages); Type (biology); Physics; Mathematics; Geology; Algorithm","score_opus":0.030826946594753327,"score_gpt":0.29541227224939914,"score_spread":0.2645853256546458,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W892349900","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9723074,0.012266793,0.0046939705,0.0007755033,0.00014259738,0.000015473535,0.000180672,0.0000657324,0.0095520215],"genre_scores_gemma":[0.98778874,0.0023630338,0.0014700142,0.0001037813,0.000045053785,0.000014747405,0.0001765147,0.000032725602,0.008005381],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983275,0.000035149475,0.00001021178,0.000025561767,0.00004206099,0.000054197466],"domain_scores_gemma":[0.99975103,0.00006797219,0.00004488662,0.00003010147,0.000047399408,0.00005851227],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031154352,0.00032390183,0.00026586402,0.00032617664,0.0005890468,0.00083991035,0.00038971996,0.00067913806,0.002450122],"category_scores_gemma":[0.00028146646,0.00016286076,0.00030240547,0.00012750397,0.0004866516,0.0010344944,0.0004453608,0.0009568645,0.0004363317],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046857435,0.00002185286,0.0019248618,0.0000700125,0.000008608182,0.00031476686,0.00007811926,0.00022201173,0.9839967,0.0040380806,0.00021056506,0.008645801],"study_design_scores_gemma":[0.000048961014,0.00030725088,0.047997653,0.000081493316,0.00003286692,0.00084232964,0.00062192837,0.00266299,0.9359461,0.0026279334,0.008810021,0.000020317779],"about_ca_topic_score_codex":0.0007350456,"about_ca_topic_score_gemma":0.0010909837,"teacher_disagreement_score":0.002450122,"about_ca_system_score_codex":0.00056330103,"about_ca_system_score_gemma":0.00045156712,"threshold_uncertainty_score":0.0081964135},"labels":[],"label_agreement":null},{"id":"W943586937","doi":"","title":"Stable Knockdown of Optineurin Expression in RGC-5 Cells Using Short Hairpin RNA Sequences","year":2008,"lang":"en","type":"article","venue":"Investigative Ophthalmology & Visual Science","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Gene knockdown; Optineurin; Small hairpin RNA; Cell biology; RNA; Molecular biology; Biology; Genetics; Gene; Mutation","score_opus":0.06508963588789493,"score_gpt":0.3349433769814745,"score_spread":0.2698537410935796,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W943586937","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97601193,0.0016205483,0.0137448935,0.00038932628,0.00034271838,0.00020825493,0.002730609,0.0005383558,0.0044133556],"genre_scores_gemma":[0.9759745,0.0006074616,0.012732552,0.00014637828,0.000040757513,0.00020655623,0.0019945337,0.00011126043,0.0081860265],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99964595,0.000042063723,0.00006295182,0.00009673997,0.00008940929,0.00006289013],"domain_scores_gemma":[0.99977773,0.00006204682,0.00006275223,0.00003832654,0.000023018732,0.000036128342],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040010692,0.0005227492,0.00044619665,0.00030741433,0.00039482923,0.00056694,0.0005485224,0.0004950464,0.0017664672],"category_scores_gemma":[0.00016276371,0.00021064452,0.00055494386,0.00025942427,0.00046911486,0.0003321277,0.00028066925,0.0009055932,0.00054093247],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006965839,0.000022136639,0.000076691336,0.000037015583,0.000010312445,0.000035887715,0.000025387504,0.00006886549,0.9986816,0.00026148427,0.00009887413,0.0006120478],"study_design_scores_gemma":[0.000025936315,0.00009909729,0.0009794221,0.0000034720842,0.00002349925,0.00006417666,0.000017363569,0.0009137288,0.99545527,0.000029512605,0.002384136,0.0000042971124],"about_ca_topic_score_codex":0.0013566292,"about_ca_topic_score_gemma":0.0029073614,"teacher_disagreement_score":0.0017664672,"about_ca_system_score_codex":0.0007061084,"about_ca_system_score_gemma":0.00039044116,"threshold_uncertainty_score":0.005909443},"labels":[],"label_agreement":null},{"id":"W966096464","doi":"10.4049/jimmunol.186.supp.148.22","title":"Immunogenic potential of mutations in mitochondrial DNA and possible implications in autoimmune disease (148.22)","year":2011,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; York University","funders":"","keywords":"ELISPOT; Epitope; Biology; T cell; CD8; Peripheral blood mononuclear cell; Immune system; Molecular biology; In vitro; Cytotoxic T cell; Immunology; Antigen; Biochemistry","score_opus":0.014085819716650412,"score_gpt":0.2428260232379514,"score_spread":0.228740203521301,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W966096464","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980457,0.0010219382,0.00030999482,0.000046628465,0.0000104498895,0.0000034763523,0.000060282877,0.000005171177,0.0004964225],"genre_scores_gemma":[0.99939466,0.00017580697,0.00014136163,0.00001883738,0.000009145407,0.0000019677395,0.000036700407,8.9516215e-7,0.00022048947],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999157,0.000023600243,0.000008074717,0.000020974523,0.000015931973,0.000015572885],"domain_scores_gemma":[0.9998344,0.000046368856,0.00006484631,0.000008522167,0.00001427912,0.000031504598],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001589954,0.00018852366,0.000093427654,0.00040840387,0.00011801605,0.00021729586,0.00012115575,0.00039499544,0.0022198607],"category_scores_gemma":[0.00024389422,0.000054604217,0.00011518891,0.00016477515,0.00014569257,0.00013729636,0.00012927533,0.00015866163,0.00026910508],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012818364,0.00015278484,0.109789245,0.00022150557,0.000058422727,0.008153854,0.0001990295,0.00023785073,0.8645247,0.00065341184,0.00022359313,0.014503698],"study_design_scores_gemma":[0.00010642393,0.0046062698,0.63972104,0.00010231372,0.00016940098,0.07199799,0.0006245172,0.0018923853,0.27192372,0.0012587822,0.007573578,0.000023544657],"about_ca_topic_score_codex":0.00011482054,"about_ca_topic_score_gemma":0.00009394224,"teacher_disagreement_score":0.0022198607,"about_ca_system_score_codex":0.00009168247,"about_ca_system_score_gemma":0.000045296547,"threshold_uncertainty_score":0.0074261427},"labels":[],"label_agreement":null},{"id":"W986329012","doi":"10.1016/j.fsi.2015.07.012","title":"Length-dependent innate antiviral effects of double-stranded RNA in the rainbow trout (Oncorhynchus mykiss) cell line, RTG-2","year":2015,"lang":"en","type":"article","venue":"Fish & Shellfish Immunology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"","keywords":"Biology; RNA silencing; Innate immune system; Interferon; Immune system; Rainbow trout; RNA; In vitro; Molecular biology; Virology; Cell culture; Virus; Gene; Cell biology; RNA interference; Genetics; Fish <Actinopterygii>","score_opus":0.01658592097461236,"score_gpt":0.2448598389451915,"score_spread":0.22827391797057914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W986329012","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982331,0.00034761569,0.00021517604,0.000051577572,0.0000256948,0.000008235752,0.0002863742,0.0000150748565,0.00081713725],"genre_scores_gemma":[0.9961159,0.00024304395,0.00041871142,0.00006742023,0.00000918207,0.000020337771,0.0010252841,0.000009977753,0.0020901952],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998932,0.000017456805,0.000012279292,0.000019304262,0.00002939868,0.000028334893],"domain_scores_gemma":[0.99992645,0.000023177443,0.000013742976,0.000012174521,0.000009373156,0.000015104952],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012683036,0.0001723558,0.0001524056,0.0001230895,0.00011868063,0.00022419608,0.00011422298,0.00015717662,0.0013042942],"category_scores_gemma":[0.00011158603,0.000093965085,0.00021668823,0.000114056886,0.00016986464,0.00017022864,0.00011757719,0.0005344559,0.00028708362],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011984287,0.000026843043,0.00020449497,0.000012808218,0.0000028686395,0.000020436424,0.000011597865,0.000047899335,0.99920434,0.00003877124,0.00004844159,0.0002616314],"study_design_scores_gemma":[0.000073333504,0.0010505447,0.023746705,0.000006717223,0.000027907246,0.00016132626,0.00010742946,0.0013940689,0.9718319,0.000055083725,0.0015372639,0.000007735245],"about_ca_topic_score_codex":0.0015070474,"about_ca_topic_score_gemma":0.003835922,"teacher_disagreement_score":0.0015070474,"about_ca_system_score_codex":0.00030432825,"about_ca_system_score_gemma":0.00023829962,"threshold_uncertainty_score":0.0043632984},"labels":[],"label_agreement":null},{"id":"W99917349","doi":"10.1186/1742-4690-10-s1-p48","title":"The interferon-induced MxB protein inhibits an early step of HIV-1 infection","year":2013,"lang":"en","type":"article","venue":"Retrovirology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital","funders":"","keywords":"Medicine; Human immunodeficiency virus (HIV); Interferon; Virology; Antibody; Immunology; Bioinformatics; Biology","score_opus":0.010854939034784773,"score_gpt":0.23058406500550696,"score_spread":0.2197291259707222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W99917349","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97414976,0.010676517,0.004606624,0.00038577247,0.00022923158,0.00011170608,0.0011018608,0.0002480509,0.0084904395],"genre_scores_gemma":[0.98503125,0.0025683907,0.0033217752,0.000109656794,0.00006351122,0.000104029095,0.00095609296,0.00002577896,0.007819428],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999931,0.00001366263,0.0000048974794,0.000008440662,0.000020480016,0.000021547636],"domain_scores_gemma":[0.9999529,0.000010114702,0.000008571989,0.0000062251133,0.000004948895,0.000017170329],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012750408,0.00026298946,0.00016033287,0.00013661975,0.00013126628,0.00016750861,0.00013205054,0.00016771718,0.0026599094],"category_scores_gemma":[0.00010015727,0.000068754416,0.00015798907,0.00004880088,0.0001038459,0.0000739327,0.000118310585,0.000701158,0.0005329392],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033203175,0.00014142187,0.00016079236,0.00006949782,0.000005337755,0.000019818854,0.0000059211493,0.0000881842,0.99326104,0.00032825014,0.00034296123,0.0052448427],"study_design_scores_gemma":[0.0000899551,0.0011936525,0.0033061418,0.000028435796,0.000014659454,0.000117177864,0.000009335327,0.0007281855,0.98257774,0.00016073436,0.011770338,0.0000036110673],"about_ca_topic_score_codex":0.00011787277,"about_ca_topic_score_gemma":0.0002246028,"teacher_disagreement_score":0.0026599094,"about_ca_system_score_codex":0.00015760178,"about_ca_system_score_gemma":0.00011835966,"threshold_uncertainty_score":0.008898318},"labels":[],"label_agreement":null}]}