{"meta":{"query_hash":"d23bdcc794bc","filters":{"venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications"},"cohort_total":136,"direct_labels_cover":0,"predictions_cover":136,"exported":136,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/d23bdcc794bc","api":"https://metacan.xera.ac/api/v1/cohort?venue=Acta+Crystallographica+Section+F+Structural+Biology+and+Crystallization+Communications"},"results":[{"id":"W1964534432","doi":"10.1107/s1744309112026553","title":"Useable diffraction data from a multiple microdomain-containing crystal of<i>Ascaris suum</i>As-p18 fatty-acid-binding protein using a microfocus beamline","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Biotechnology and Biological Sciences Research Council; Wellcome Trust","keywords":"Ascaris suum; Beamline; Fatty acid; Crystallography; Diffraction; Fatty acid-binding protein; Biology; Chemistry; Biochemistry; Beam (structure); Gene; Optics; Physics; Immunology","score_opus":0.03840649264283318,"score_gpt":0.292434012962955,"score_spread":0.2540275203201218,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964534432","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97562313,0.0012261819,0.020564737,0.0001805785,0.00058183895,0.0006054178,0.00094505685,0.00017414238,0.000098932134],"genre_scores_gemma":[0.9721891,0.0002648095,0.02330349,0.000064742286,0.00026827448,0.000039019433,0.003814014,0.000041275252,0.000015250723],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972388,0.00058359577,0.0008088311,0.0006361782,0.000199413,0.0005331424],"domain_scores_gemma":[0.99679273,0.00035458108,0.0007730235,0.0016207104,0.00027756218,0.00018139253],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00051937293,0.00038503023,0.00047002904,0.00036581833,0.0012649546,0.00012339267,0.00084657635,0.00046654756,0.00027870256],"category_scores_gemma":[0.00032670473,0.00036552298,0.00010728402,0.000726988,0.00068920315,0.0015595185,0.00079323095,0.00045070908,0.0000011116794],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018612113,0.000058179165,0.037884884,0.00002826704,0.000100620935,2.5164584e-7,0.00041560622,0.000017709168,0.9606413,0.0004543181,0.00003259139,0.00018011828],"study_design_scores_gemma":[0.009623388,0.0016234901,0.109834366,0.0007052243,0.0019709838,0.00083088083,0.010442515,0.019694565,0.752127,0.014939665,0.0735331,0.004674818],"about_ca_topic_score_codex":0.0019781827,"about_ca_topic_score_gemma":0.00078989874,"teacher_disagreement_score":0.20851433,"about_ca_system_score_codex":0.0000878003,"about_ca_system_score_gemma":0.00007849408,"threshold_uncertainty_score":0.99987966},"labels":[],"label_agreement":null},{"id":"W1964808853","doi":"10.1107/s174430911001225x","title":"Crystallization and preliminary X-ray crystallographic analysis of the tetracycline-degrading monooxygenase TetX2 from<i>Bacteroides thetaiotaomicron</i>","year":2010,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Metal-Catalyzed Oxygenation Mechanisms","field":"Chemistry","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Bacteroides thetaiotaomicron; Crystallization; Bacteroides; X-ray; Tetracycline; Crystallography; Chemistry; Materials science; Biology; Bacteria; Biochemistry; Physics; Antibiotics; Optics; Genetics; Organic chemistry","score_opus":0.011705499795855619,"score_gpt":0.25101738905695664,"score_spread":0.23931188926110103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964808853","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923425,0.00068312837,0.0043047722,0.00083731406,0.00028997392,0.00040204392,0.00063381623,0.00017141283,0.00033506556],"genre_scores_gemma":[0.9917166,0.0015163871,0.0040757973,0.00013292546,0.00008523124,0.000081052654,0.002277569,0.000050607185,0.00006379381],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99708,0.00035171575,0.0011024157,0.00079776446,0.00027738934,0.0003906655],"domain_scores_gemma":[0.99559146,0.0007369006,0.0010248616,0.002038364,0.00041030944,0.00019811455],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00042271358,0.0005051592,0.0006450328,0.00089378573,0.001273372,0.00015087657,0.0011081888,0.0006873635,0.00053773436],"category_scores_gemma":[0.00038047158,0.00041237526,0.00037551983,0.0023337698,0.0014831387,0.00051249895,0.0006486432,0.00091760186,1.5747172e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006134176,0.00007188451,0.0584823,0.00004114756,0.0009706388,2.9161959e-7,0.00042844997,0.000117514115,0.9345644,0.0046282443,0.0000132136165,0.0006205437],"study_design_scores_gemma":[0.0039502946,0.0003023089,0.81090885,0.00020002587,0.007900779,0.00012613345,0.0030291223,0.06261438,0.035383675,0.043483157,0.029374557,0.0027267204],"about_ca_topic_score_codex":0.0003153332,"about_ca_topic_score_gemma":0.0017745694,"teacher_disagreement_score":0.89918077,"about_ca_system_score_codex":0.000032687993,"about_ca_system_score_gemma":0.000063112544,"threshold_uncertainty_score":0.9998328},"labels":[],"label_agreement":null},{"id":"W1967143677","doi":"10.1107/s1744309109029376","title":"Crystallization and preliminary X-ray diffraction analysis of motif N from<i>Saccharomyces cerevisiae</i>Dbf4","year":2009,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo; McMaster University","funders":"National Institute of Biomedical Imaging and Bioengineering; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Saccharomyces cerevisiae; Biology; G2-M DNA damage checkpoint; Origin recognition complex; DNA replication; Cell biology; Genetics; Computational biology; Cell cycle; DNA; Cell cycle checkpoint; Eukaryotic DNA replication; Yeast; Gene","score_opus":0.009742041304268773,"score_gpt":0.2609026389167719,"score_spread":0.25116059761250314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967143677","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9805946,0.0019573683,0.015878687,0.00069427263,0.00009735575,0.00037176724,0.00015271331,0.00007502334,0.00017822972],"genre_scores_gemma":[0.9863052,0.0055213324,0.0039256327,0.00018943095,0.00006409512,0.000024428438,0.0039216345,0.000017527856,0.000030762156],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982237,0.0003374775,0.0005422797,0.00055597286,0.00012478753,0.00021574911],"domain_scores_gemma":[0.9981791,0.000097449556,0.00044836392,0.00091264193,0.00025316936,0.00010927705],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00019093182,0.00027864552,0.0003750346,0.00045947533,0.0004325178,0.00005482782,0.00034983153,0.00041701357,0.000049051563],"category_scores_gemma":[0.00011304963,0.0002743727,0.00015518282,0.0009143985,0.00037161287,0.00006282505,0.00020802152,0.00018469995,6.38737e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012358309,0.000061925944,0.016631054,0.000013719482,0.0005873211,1.69773e-7,0.00016328755,0.0002209477,0.9784987,0.0018625831,0.00003428258,0.001802433],"study_design_scores_gemma":[0.001129763,0.001465541,0.9563099,0.00004952962,0.0016486587,0.000025383708,0.00066392776,0.012537824,0.0034726597,0.008957243,0.012988823,0.0007507113],"about_ca_topic_score_codex":0.00008219695,"about_ca_topic_score_gemma":0.00018244483,"teacher_disagreement_score":0.975026,"about_ca_system_score_codex":0.00001606962,"about_ca_system_score_gemma":0.000027494414,"threshold_uncertainty_score":0.99997085},"labels":[],"label_agreement":null},{"id":"W1968251711","doi":"10.1107/s1744309111046343","title":"Structure of the fucose mutarotase from<i>Streptococcus pneumoniae</i>in complex with<scp>L</scp>-fucose","year":2011,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Michael Smith Health Research BC","keywords":"Fucose; Isomerase; Chemistry; Biochemistry; Context (archaeology); Escherichia coli; Microbiology; Enzyme; Biology; Glycoprotein; Gene","score_opus":0.019632939798363534,"score_gpt":0.26145533200838605,"score_spread":0.24182239221002252,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968251711","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997314,0.00038269136,0.00044686877,0.00020727434,0.00006268907,0.00066926755,0.00029399662,0.000025137444,0.00059812807],"genre_scores_gemma":[0.9969061,0.00049344276,0.0010230436,0.00012466645,0.000037730515,0.000048075013,0.0013098142,0.000021134334,0.000035979956],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983447,0.00042870114,0.00041474265,0.00040941016,0.0001383393,0.0002641097],"domain_scores_gemma":[0.9981541,0.0000896462,0.00028673804,0.0011305042,0.00024568872,0.000093304916],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011032039,0.00023946994,0.00022238077,0.0001819124,0.00039499652,0.000026512445,0.00067972817,0.00032574954,0.00007742231],"category_scores_gemma":[0.00015869623,0.00017661699,0.00008872058,0.0006543857,0.00091182475,0.000028527658,0.0003917922,0.0003486278,1.3743343e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044596785,0.000048773647,0.15748654,0.000011465047,0.00007496725,3.4711474e-7,0.00033260748,0.000028187183,0.84113675,0.000557727,0.00006589846,0.0002121162],"study_design_scores_gemma":[0.0019685125,0.0006099829,0.9131687,0.000049496874,0.000071735514,0.00004576737,0.0012222293,0.0006392556,0.037541624,0.0068000327,0.037570514,0.0003121076],"about_ca_topic_score_codex":0.0003917935,"about_ca_topic_score_gemma":0.004482046,"teacher_disagreement_score":0.8035951,"about_ca_system_score_codex":0.000015214902,"about_ca_system_score_gemma":0.0000684119,"threshold_uncertainty_score":0.7202232},"labels":[],"label_agreement":null},{"id":"W1968746232","doi":"10.1107/s1744309111028363","title":"ADP–Mg<sup>2+</sup>bound to the ATP-grasp domain of ATP-citrate lyase","year":2011,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Research Council Canada; Western Economic Diversification Canada; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Canadian Light Source","keywords":"ATP citrate lyase; Lyase; Citrate synthase; Enzyme; Adenosine triphosphate; Tartrate; Chemistry; Transferase; Biochemistry; Stereochemistry; Crystallography","score_opus":0.02252533099878557,"score_gpt":0.25676740726089936,"score_spread":0.2342420762621138,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968746232","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9882298,0.0003972722,0.0067888624,0.0017913103,0.00036918174,0.0005855441,0.00014646433,0.00016360707,0.0015279566],"genre_scores_gemma":[0.9948618,0.00036684464,0.0036867147,0.0005655138,0.00011068846,0.000078986996,0.00026017247,0.00002385158,0.00004541705],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99791116,0.00049476366,0.0006269972,0.0004580198,0.00016477882,0.0003443127],"domain_scores_gemma":[0.99771947,0.00019444826,0.00035234835,0.0012623331,0.00032703573,0.0001443687],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043974258,0.00029407814,0.0003122907,0.00029396504,0.0011639028,0.00007434289,0.00085070875,0.00030119676,0.00050914567],"category_scores_gemma":[0.00009954143,0.00021620502,0.00012094087,0.00094534794,0.0009853063,0.00035535652,0.0003394057,0.00031137074,0.000002453735],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022096318,0.00005550088,0.008044675,0.000033690223,0.00010733538,5.5501044e-7,0.008178519,0.00019480169,0.95421124,0.027947344,0.00039577374,0.0006095908],"study_design_scores_gemma":[0.0038022697,0.0028931985,0.32282293,0.0001967958,0.00072157674,0.00047014834,0.015364721,0.0034708946,0.014158296,0.16097172,0.472369,0.002758494],"about_ca_topic_score_codex":0.00036416945,"about_ca_topic_score_gemma":0.0006095013,"teacher_disagreement_score":0.9400529,"about_ca_system_score_codex":0.000029785619,"about_ca_system_score_gemma":0.00005009254,"threshold_uncertainty_score":0.8951917},"labels":[],"label_agreement":null},{"id":"W1970781803","doi":"10.1107/s1744309109023914","title":"Crystallization and preliminary crystallographic analysis of the bacterial capsule assembly-regulating tyrosine phosphatases Wzb of<i>Escherichia coli</i>and Cps4B of<i>Streptococcus pneumoniae</i>","year":2009,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Wellcome Trust","keywords":"Escherichia coli; Streptococcus pneumoniae; Protein tyrosine phosphatase; Biology; Bacteria; Phosphatase; Microbiology; Biochemistry; Tyrosine; Enzyme; Genetics; Gene","score_opus":0.009062083457068658,"score_gpt":0.24397022522307538,"score_spread":0.23490814176600672,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970781803","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947306,0.003431853,0.0007244858,0.0002862476,0.000072069946,0.00041613777,0.0002800614,0.000008765822,0.000049788843],"genre_scores_gemma":[0.9937546,0.0047816793,0.0007776472,0.000059905542,0.000028119946,0.000019650377,0.00055960944,0.000012525619,0.0000062389345],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99845207,0.00026214705,0.00063654786,0.0003662658,0.00010223391,0.00018074339],"domain_scores_gemma":[0.9982042,0.0000868341,0.00065828627,0.00068798783,0.00030100477,0.000061738654],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019934098,0.00024346859,0.0004305917,0.00024188383,0.00039271062,0.000022652874,0.00030866716,0.00025491012,0.0000053448543],"category_scores_gemma":[0.000101830075,0.0002049477,0.00015806408,0.00093555124,0.00096284057,0.00001468902,0.00032737057,0.000120704055,2.5073885e-9],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000070162634,0.000045015917,0.070249274,0.000035386638,0.0004895926,3.1928316e-8,0.00019366624,0.00020308046,0.92705417,0.0012693863,0.000008181845,0.0003820282],"study_design_scores_gemma":[0.0007479017,0.00078470336,0.9708289,0.00004337304,0.00093993626,0.000008360414,0.0003063731,0.0012257713,0.021800112,0.0012532735,0.0017495204,0.0003117603],"about_ca_topic_score_codex":0.00007154398,"about_ca_topic_score_gemma":0.00023761265,"teacher_disagreement_score":0.90525407,"about_ca_system_score_codex":0.0000057782804,"about_ca_system_score_gemma":0.00003906637,"threshold_uncertainty_score":0.8357525},"labels":[],"label_agreement":null},{"id":"W1971013026","doi":"10.1107/s1744309112011487","title":"The structure of an orthorhombic crystal form of a `forced reduced' thiol peroxidase reveals lattice formation aided by the presence of the affinity tag","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; Canadian Institutes of Health Research; Wellcome Trust","keywords":"Orthorhombic crystal system; Crystal structure; Peroxiredoxin; Linker; Crystallography; Peroxidase; Thiol; Chemistry; Molecular replacement; Crystal (programming language); Stereochemistry; Enzyme; Biochemistry","score_opus":0.014001250375922642,"score_gpt":0.26353724406841733,"score_spread":0.24953599369249468,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971013026","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966433,0.0006042166,0.0008149653,0.0005370477,0.00036318737,0.00062945957,0.00025645422,0.000036087768,0.00011525114],"genre_scores_gemma":[0.99876386,0.00033648132,0.00051193853,0.000056935365,0.000056704557,0.000021056829,0.00021952481,0.000013327967,0.000020180263],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997478,0.0009946722,0.0007814415,0.00021211669,0.00024327257,0.00029047776],"domain_scores_gemma":[0.99638355,0.00067247363,0.0011265279,0.0012985849,0.0004452406,0.000073600226],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0006702393,0.00022012385,0.00027786908,0.00009239456,0.001387211,0.00004326835,0.0008586555,0.00026755905,0.000059145023],"category_scores_gemma":[0.00040055686,0.00011908952,0.0001215723,0.00069746724,0.0015748277,0.0008350895,0.00031475845,0.00034138374,4.7363642e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000865875,0.000026487296,0.0037289017,0.000044713037,0.000036687597,8.029176e-9,0.0016919825,0.000026472073,0.98434186,0.009718638,0.00008491821,0.000212715],"study_design_scores_gemma":[0.0024488026,0.0011958702,0.29632792,0.00022756161,0.00078271073,0.00033417024,0.01303188,0.0028004302,0.58371353,0.08834606,0.009650218,0.0011408362],"about_ca_topic_score_codex":0.00013670453,"about_ca_topic_score_gemma":0.0004914891,"teacher_disagreement_score":0.40062833,"about_ca_system_score_codex":0.000024534367,"about_ca_system_score_gemma":0.00004672684,"threshold_uncertainty_score":0.99991286},"labels":[],"label_agreement":null},{"id":"W1972698832","doi":"10.1107/s174430911002748x","title":"Crystallization and preliminary X-ray analysis of PaaAC, the main component of the hydroxylase of the<i>Escherichia coli</i>phenylacetyl-coenzyme A oxygenase complex","year":2010,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Neurological diseases and metabolism","field":"Neuroscience","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Hydroxylation; Stereochemistry; Ligand (biochemistry); Monooxygenase; Escherichia coli; Cofactor; Enzyme; Chemistry; Substrate (aquarium); Dioxygenase; Oxygenase; Resolution (logic); Biochemistry; Biology; Cytochrome P450; Gene; Receptor","score_opus":0.019872376770767284,"score_gpt":0.2625428542833417,"score_spread":0.2426704775125744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972698832","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953818,0.00018949922,0.0008783108,0.0021950665,0.00017250239,0.0006905078,0.00038809405,0.000028643211,0.0000756277],"genre_scores_gemma":[0.9981868,0.0008872738,0.00023645813,0.0005322457,0.000018533572,0.0000361951,0.00007941718,0.0000124046655,0.000010670619],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9976006,0.00097452564,0.0006562022,0.00035366637,0.00021478596,0.0002001901],"domain_scores_gemma":[0.99693215,0.0006926708,0.0008104206,0.00130263,0.00018215021,0.00007996134],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00026967644,0.00022106804,0.00038152153,0.00019601213,0.00083921244,0.000028000473,0.00096876064,0.00019078211,0.000061387116],"category_scores_gemma":[0.0004394067,0.00012530768,0.00026407736,0.0020614266,0.0028751618,0.00012649738,0.0006339136,0.00041270503,1.8812617e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009489195,0.000095835494,0.010169631,0.000026062971,0.00011341797,7.8577045e-8,0.00025764512,0.00035606045,0.96824765,0.020545358,0.0000283522,0.00006499623],"study_design_scores_gemma":[0.00065754476,0.00018265392,0.9597981,0.000017298162,0.00090007886,0.000014791576,0.00022842224,0.017231764,0.008004555,0.0059367954,0.0068033873,0.00022461722],"about_ca_topic_score_codex":0.0001165204,"about_ca_topic_score_gemma":0.0004193039,"teacher_disagreement_score":0.9602431,"about_ca_system_score_codex":0.00000696847,"about_ca_system_score_gemma":0.000044067296,"threshold_uncertainty_score":0.9998384},"labels":[],"label_agreement":null},{"id":"W1972936647","doi":"10.1107/s1744309105007918","title":"Crystallization and preliminary X-ray analysis of AzoR (azoreductase) from<i>Escherichia coli</i>","year":2005,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme-mediated dye degradation","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Japan Society for the Promotion of Science; University of British Columbia; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Crystallography; Tetragonal crystal system; Crystallization; Chemistry; X-ray; Escherichia coli; Synchrotron radiation; X-ray crystallography; Crystal structure; Diffraction; Materials science; Stereochemistry; Physics; Optics; Organic chemistry","score_opus":0.013751255450216184,"score_gpt":0.2433874193355207,"score_spread":0.2296361638853045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972936647","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99405783,0.0012697103,0.0009540714,0.0024469797,0.0000820499,0.0003834966,0.0005440351,0.00013961985,0.00012218725],"genre_scores_gemma":[0.98621863,0.0028108296,0.0025156029,0.0002345631,0.00011339552,0.00004602274,0.008038548,0.0000044655194,0.000017924636],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980524,0.0003964225,0.00064408046,0.00049433217,0.0001627891,0.00024996445],"domain_scores_gemma":[0.9981715,0.0005607977,0.0004858368,0.00035070968,0.00028968859,0.00014144518],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023057096,0.00027351052,0.000404718,0.00023377722,0.0006390132,0.00007291983,0.00041051538,0.00037155743,0.0002484262],"category_scores_gemma":[0.00011706474,0.00016221653,0.00012911942,0.0021235512,0.00058576633,0.00047661702,0.00022718997,0.0002555651,2.14017e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008431629,0.00007574136,0.03203365,0.000008768288,0.00045704248,1.3203997e-7,0.00033882135,0.00018924472,0.96018726,0.0021820734,0.0000754126,0.004367515],"study_design_scores_gemma":[0.0005510296,0.00041976158,0.93970793,0.000028088663,0.0011177548,0.0000047906224,0.0008355225,0.017916568,0.0008085889,0.0031609992,0.034890514,0.00055846706],"about_ca_topic_score_codex":0.0004855758,"about_ca_topic_score_gemma":0.002594963,"teacher_disagreement_score":0.9593787,"about_ca_system_score_codex":0.000030024652,"about_ca_system_score_gemma":0.000015889787,"threshold_uncertainty_score":0.6614998},"labels":[],"label_agreement":null},{"id":"W1973715335","doi":"10.1107/s1744309112031259","title":"Structure of anabolic ornithine carbamoyltransferase from<i>Campylobacter jejuni</i>at 2.7 Å resolution","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Metabolism and Genetic Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Argonne National Laboratory; Biological and Environmental Research; National Institute of Allergy and Infectious Diseases; U.S. Public Health Service; National Institutes of Health; U.S. Department of Health and Human Services; U.S. Department of Energy","keywords":"Trimer; Crystallography; Stereochemistry; Chemistry; Ornithine; Campylobacter jejuni; Protein subunit; Protein structure; Aspartate carbamoyltransferase; Ornithine Carbamoyltransferase; Arginine; Biochemistry; Enzyme; Biology; Amino acid; Allosteric regulation","score_opus":0.008750309855177319,"score_gpt":0.2495249434593672,"score_spread":0.24077463360418988,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973715335","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99179673,0.004990366,0.0015526001,0.00027924954,0.000282465,0.00026017663,0.0005146768,0.000030241505,0.0002934631],"genre_scores_gemma":[0.9892257,0.0039879167,0.0014328731,0.00021117493,0.00017763808,0.000014234367,0.004887967,0.000021891141,0.000040625855],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99856097,0.00032683733,0.0004043628,0.00031518054,0.000099330326,0.0002933372],"domain_scores_gemma":[0.9985672,0.000046953064,0.00021175064,0.0008765774,0.00015640687,0.0001410852],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011758199,0.00024033623,0.00024028706,0.00015564194,0.00041440138,0.00001722654,0.00035061673,0.00032488193,0.00018365776],"category_scores_gemma":[0.000069540896,0.0002222303,0.00009649273,0.0003482038,0.00057477574,0.00003312288,0.00026144157,0.00017252725,1.8627074e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008464368,0.00004143968,0.11362309,0.000012450865,0.00011510401,3.1872908e-8,0.0002112925,0.000022793432,0.8842932,0.0010249928,0.00015896045,0.00041197953],"study_design_scores_gemma":[0.0021804548,0.00038325976,0.680674,0.000027957482,0.00033302655,0.00006723818,0.00058554386,0.0002342631,0.029582582,0.004569157,0.2804341,0.0009284011],"about_ca_topic_score_codex":0.00016421881,"about_ca_topic_score_gemma":0.0008340828,"teacher_disagreement_score":0.85471064,"about_ca_system_score_codex":0.000007646924,"about_ca_system_score_gemma":0.000028401435,"threshold_uncertainty_score":0.90622884},"labels":[],"label_agreement":null},{"id":"W1976482860","doi":"10.1107/s1744309108024500","title":"Expression, purification and preliminary crystallographic analysis of<i>N</i>-acetylglucosamine-1-phosphate uridylyltransferase from<i>Mycobacterium tuberculosis</i>","year":2008,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Mycobacterium tuberculosis; Microbiology; Tuberculosis; Phosphate; Chemistry; Mycobacterium; Biology; Biochemistry; Medicine; Pathology","score_opus":0.020393599427410064,"score_gpt":0.2870513571356673,"score_spread":0.2666577577082573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976482860","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9879783,0.004608484,0.0028268178,0.0032194967,0.00007990966,0.00064146717,0.0003376748,0.00014893444,0.00015891252],"genre_scores_gemma":[0.95317864,0.038149253,0.0034130441,0.00042586972,0.00005638094,0.000118443284,0.004612883,0.00002769231,0.00001778051],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99713737,0.00062823965,0.00092025584,0.0007042428,0.00020684233,0.0004030631],"domain_scores_gemma":[0.9970085,0.0006494875,0.00034660377,0.0012071732,0.0004504347,0.00033777204],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00032292207,0.00037186051,0.00086215424,0.0011442868,0.0008201518,0.000026384945,0.00031769578,0.00051229575,0.00012748815],"category_scores_gemma":[0.0002171112,0.00032771684,0.00030132514,0.0021110491,0.0018126775,0.00034778356,0.0002390661,0.0005098627,1.6433226e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004262695,0.00011162262,0.38136613,0.000049897564,0.00129333,0.0000022422012,0.00040008093,0.000020149291,0.61526793,0.00049317145,0.000107402004,0.00046179575],"study_design_scores_gemma":[0.0011577167,0.00056194427,0.9831073,0.00004805069,0.0014648428,0.0001541645,0.00020342572,0.0025727986,0.0013059326,0.00071779976,0.008356669,0.00034931698],"about_ca_topic_score_codex":0.00047032337,"about_ca_topic_score_gemma":0.00020326058,"teacher_disagreement_score":0.613962,"about_ca_system_score_codex":0.00003104609,"about_ca_system_score_gemma":0.000068654634,"threshold_uncertainty_score":0.9999175},"labels":[],"label_agreement":null},{"id":"W1976988483","doi":"10.1107/s1744309113021246","title":"Structure of isochorismate synthase DhbC from<i>Bacillus anthracis</i>","year":2013,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Argonne National Laboratory; National Institute of Allergy and Infectious Diseases; Biological and Environmental Research; National Institutes of Health; U.S. Department of Health and Human Services; U.S. Department of Energy","keywords":"Bacillus anthracis; Biosynthesis; Siderophore; Tryptophan synthase; Enzyme; ATP synthase; Escherichia coli; Biochemistry; Chemistry; Microbiology; Biology; Bacteria; Genetics","score_opus":0.010560959436446773,"score_gpt":0.2488758774764643,"score_spread":0.23831491804001753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976988483","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930084,0.00079544325,0.0033536083,0.0007565512,0.0005768981,0.00042593235,0.0004889654,0.00017282438,0.000421378],"genre_scores_gemma":[0.9938966,0.0007465513,0.004055869,0.00018035571,0.00012375841,0.000033223816,0.0009173837,0.000022328693,0.000023951974],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9981288,0.0003330428,0.00062442303,0.00046307585,0.0001560893,0.00029461161],"domain_scores_gemma":[0.9977316,0.00026707596,0.00046458087,0.0010152627,0.0003940176,0.00012741816],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010397131,0.0002964813,0.000371193,0.00024907154,0.000702528,0.00009898858,0.0005534418,0.00040372397,0.0021620546],"category_scores_gemma":[0.000103827646,0.00025201016,0.0000990371,0.00054687756,0.0009527886,0.0006391889,0.00026879326,0.00031609595,0.0000018742556],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027381368,0.000018067905,0.005463973,0.000019097875,0.00005256074,1.294554e-7,0.00030735822,0.000026489974,0.99075603,0.002184607,0.0002683007,0.0008759933],"study_design_scores_gemma":[0.005405209,0.0016454582,0.31178203,0.00028061555,0.00093035214,0.00027564692,0.0056212526,0.006988354,0.21652545,0.3669472,0.07985611,0.0037423016],"about_ca_topic_score_codex":0.00091645925,"about_ca_topic_score_gemma":0.00045773908,"teacher_disagreement_score":0.7742306,"about_ca_system_score_codex":0.000026919206,"about_ca_system_score_gemma":0.000032809672,"threshold_uncertainty_score":0.9999932},"labels":[],"label_agreement":null},{"id":"W1978213792","doi":"10.1107/s1744309108000328","title":"Purification, crystallization and preliminary X-ray analysis of inositol dehydrogenase (IDH) from<i>Bacillus subtilis</i>","year":2008,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan","funders":"Argonne National Laboratory; Basic Energy Sciences; National Center for Research Resources; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Saskatchewan Health Research Foundation; National Institutes of Health; University of Saskatchewan; Canadian Light Source; U.S. Department of Energy","keywords":"Bacillus subtilis; Dehydrogenase; Inositol; NAD+ kinase; Crystallization; Enzyme; Resolution (logic); Chemistry; Affinity chromatography; Crystallography; Biochemistry; Biology; Bacteria; Organic chemistry","score_opus":0.01591221419137975,"score_gpt":0.2469395440856632,"score_spread":0.23102732989428346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978213792","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98319733,0.0016600793,0.013306334,0.00045874872,0.00020956177,0.0003956215,0.00043266872,0.00017013754,0.00016951241],"genre_scores_gemma":[0.9891198,0.0030466632,0.004498626,0.00013349272,0.0000678106,0.000056724813,0.003030592,0.00002203212,0.000024217346],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9976573,0.00046177008,0.00078652793,0.00061962585,0.00020504247,0.000269732],"domain_scores_gemma":[0.9974327,0.00034469235,0.00058844406,0.0010385583,0.00044640864,0.00014918488],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002327731,0.00031780527,0.00049736083,0.00071437366,0.0011586616,0.000057678655,0.0004434414,0.00039648215,0.00023319457],"category_scores_gemma":[0.00012931075,0.00029821222,0.00014161225,0.0017385052,0.0013082195,0.00056330103,0.00024289152,0.0002440474,3.4003443e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012098255,0.000048416536,0.047576737,0.000021698917,0.00033873456,6.4618285e-7,0.0010823532,0.0003339981,0.94778013,0.0023993587,0.00009207709,0.00020486367],"study_design_scores_gemma":[0.0021661376,0.0008303446,0.91669035,0.00006136166,0.0029532856,0.0001403338,0.0013833372,0.020165298,0.019624164,0.009689183,0.024894776,0.001401425],"about_ca_topic_score_codex":0.0004127111,"about_ca_topic_score_gemma":0.0004961907,"teacher_disagreement_score":0.92815596,"about_ca_system_score_codex":0.00003498629,"about_ca_system_score_gemma":0.000053949178,"threshold_uncertainty_score":0.999947},"labels":[],"label_agreement":null},{"id":"W1979331748","doi":"10.1107/s1744309109029674","title":"The structure of phosphate-bound<i>Escherichia coli</i>adenylosuccinate lyase identifies His171 as a catalytic acid","year":2009,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Biochemical and Molecular Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Center for Research Resources; National Institute of General Medical Sciences","keywords":"Escherichia coli; Lyase; Chemistry; Phosphate; Biochemistry; Enzyme; Gene","score_opus":0.008274010509702438,"score_gpt":0.2715435993222917,"score_spread":0.2632695888125893,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979331748","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99147177,0.004488241,0.00058604614,0.0026120287,0.00011923355,0.0003793357,0.00006731406,0.000034725894,0.00024133587],"genre_scores_gemma":[0.9939152,0.004233201,0.0003003893,0.0003555573,0.00006130713,0.00001345271,0.0009938909,0.000015867667,0.000111107285],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99850464,0.00024908283,0.0004095034,0.0003854693,0.00014404742,0.00030725918],"domain_scores_gemma":[0.99829316,0.000057886315,0.00023613135,0.0009644782,0.0003293484,0.000118994205],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015637637,0.00023734896,0.00021082375,0.00010027924,0.00092079205,0.00009147802,0.00070234435,0.0003584457,0.000020073938],"category_scores_gemma":[0.00019801957,0.00018262553,0.00012291718,0.00046775126,0.0009795751,0.000025069765,0.00029308654,0.00031344892,1.931433e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017947899,0.000023453307,0.0006985153,0.0000143272055,0.00010320134,3.2557105e-7,0.00005833683,0.00000406954,0.99443614,0.0034327174,0.00017598039,0.00087344553],"study_design_scores_gemma":[0.0017250265,0.0015560586,0.021829763,0.000045034674,0.00017269203,0.00013304543,0.00050125143,0.00026050842,0.8333306,0.04552858,0.09410886,0.0008086043],"about_ca_topic_score_codex":0.000058730424,"about_ca_topic_score_gemma":0.00022070628,"teacher_disagreement_score":0.16110557,"about_ca_system_score_codex":0.000015505402,"about_ca_system_score_gemma":0.000077270844,"threshold_uncertainty_score":0.74472535},"labels":[],"label_agreement":null},{"id":"W1984146496","doi":"10.1107/s1744309109038718","title":"Purification, crystallization and preliminary X-ray analysis of bifunctional isocitrate dehydrogenase kinase/phosphatase in complex with its substrate, isocitrate dehydrogenase, from<i>Escherichia coli</i>","year":2009,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research","keywords":"Isocitrate dehydrogenase; Dehydrogenase; Phosphofructokinase 2; Bifunctional; Substrate (aquarium); Escherichia coli; Biochemistry; IDH1; Biology; Chemistry; Crystallography; Enzyme; Gene","score_opus":0.0159821236544539,"score_gpt":0.2505888403252772,"score_spread":0.23460671667082328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984146496","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98726076,0.001772631,0.008712747,0.0006098967,0.000082717015,0.00060244085,0.0006914325,0.00013618337,0.00013120065],"genre_scores_gemma":[0.98767823,0.0014373162,0.0041561387,0.00035866813,0.000044338674,0.00006739918,0.0062227333,0.000023436596,0.000011736592],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9971722,0.0005496357,0.0009103085,0.0007557182,0.00024035,0.00037180286],"domain_scores_gemma":[0.9976536,0.0002657211,0.00065564434,0.0007819968,0.0004695949,0.00017344284],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00036642211,0.0004237411,0.0005864998,0.0007164146,0.0007813928,0.00012359499,0.0004150176,0.00039939876,0.00026735337],"category_scores_gemma":[0.00006870987,0.00038548285,0.00011786573,0.0027306266,0.0007527057,0.0007185188,0.00009017355,0.000334176,3.4605745e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004290652,0.0001163515,0.017042937,0.000026304913,0.00029374496,0.0000014573214,0.00048917386,0.0037339968,0.9708982,0.0068101524,0.00004236978,0.00011622708],"study_design_scores_gemma":[0.0026357872,0.0012537105,0.92254597,0.00007357967,0.0015957969,0.000024093199,0.0010822911,0.03763332,0.020236678,0.00982044,0.0019595162,0.0011388462],"about_ca_topic_score_codex":0.0002924635,"about_ca_topic_score_gemma":0.0015979696,"teacher_disagreement_score":0.95066154,"about_ca_system_score_codex":0.00005858051,"about_ca_system_score_gemma":0.00008956698,"threshold_uncertainty_score":0.9998597},"labels":[],"label_agreement":null},{"id":"W1984605091","doi":"10.1107/s1744309111030417","title":"Novel crystallization conditions for tandem variant R67 DHFR yield a wild-type crystal structure","year":2011,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Dimer; Dihydrofolate reductase; Proteolysis; Protein subunit; Chemistry; Enzyme; Trimethoprim; Recombinant DNA; Stereochemistry; Biochemistry; Antibiotics; Gene","score_opus":0.024970272257599957,"score_gpt":0.2717627173534917,"score_spread":0.24679244509589177,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984605091","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8679879,0.00062143203,0.12762336,0.00027931188,0.0006459469,0.0013838222,0.00075904344,0.00015227597,0.00054696354],"genre_scores_gemma":[0.97916293,0.0011932534,0.013367795,0.00027912515,0.00021205144,0.000093539325,0.0055282665,0.00005768723,0.00010536605],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9979109,0.00017747423,0.0006451686,0.0007115953,0.00012343045,0.0004313945],"domain_scores_gemma":[0.99753636,0.00011760766,0.00044435466,0.0011311916,0.000605669,0.00016483979],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00019891199,0.00041593888,0.0003413975,0.00025548326,0.0011110527,0.00009021227,0.0006448084,0.0007021368,0.00017051025],"category_scores_gemma":[0.00027796088,0.0004088444,0.00015847156,0.0005682223,0.0008607559,0.00007487158,0.00029569506,0.000273138,1.876797e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001912278,0.00007866094,0.014195146,0.000034265107,0.0002453061,3.408217e-7,0.00024690916,0.000031367024,0.97588325,0.008697293,0.00030702323,0.000089192356],"study_design_scores_gemma":[0.009788889,0.007482604,0.4494109,0.00042951852,0.0016629351,0.0018038864,0.004882214,0.005590628,0.020499663,0.06967673,0.42255563,0.0062164445],"about_ca_topic_score_codex":0.00006828268,"about_ca_topic_score_gemma":0.0007157284,"teacher_disagreement_score":0.9553836,"about_ca_system_score_codex":0.000033530298,"about_ca_system_score_gemma":0.00011729601,"threshold_uncertainty_score":0.9998363},"labels":[],"label_agreement":null},{"id":"W1986181104","doi":"10.1107/s174430911202297x","title":"Purification, crystallization and preliminary X-ray diffraction analysis of inner membrane complex (IMC) subcompartment protein 1 (ISP1) from<i>Toxoplasma gondii</i>","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Toxoplasma gondii Research Studies","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Michael Smith Health Research BC","keywords":"Toxoplasma gondii; Crystallization; Chemistry; Materials science; Crystallography; Biology; Immunology; Antibody; Organic chemistry","score_opus":0.024959182644515267,"score_gpt":0.28250394691356034,"score_spread":0.2575447642690451,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986181104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9898251,0.0036315485,0.0031769588,0.0011786425,0.0002191017,0.001039716,0.0005165945,0.0001755939,0.00023670473],"genre_scores_gemma":[0.98611504,0.0030666715,0.0018270477,0.000078994526,0.00004537285,0.00024937384,0.00848296,0.000028550414,0.000105963416],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9967958,0.0010899495,0.0009037928,0.0005684476,0.00012212164,0.00051991886],"domain_scores_gemma":[0.99710304,0.0006358215,0.00070821954,0.0010073843,0.00042783725,0.000117702984],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004624134,0.00040235472,0.0006911346,0.0010243899,0.0011886539,0.000052967825,0.00045374926,0.0005416268,0.0002622376],"category_scores_gemma":[0.00021159255,0.00037990254,0.00016923327,0.0016862575,0.0015720124,0.0006270403,0.0004517359,0.0004976493,0.0000013377688],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024302196,0.00020898363,0.092871055,0.00004033425,0.0021070032,1.1720881e-7,0.0011591822,0.00007810516,0.89743936,0.0051193777,0.00011553715,0.00061790354],"study_design_scores_gemma":[0.001204643,0.00031990863,0.9443239,0.000032716707,0.0011798062,0.000019485331,0.0011061133,0.0010214271,0.0024907258,0.00076494453,0.047038008,0.0004983132],"about_ca_topic_score_codex":0.00035945926,"about_ca_topic_score_gemma":0.0004688775,"teacher_disagreement_score":0.89494866,"about_ca_system_score_codex":0.000072956595,"about_ca_system_score_gemma":0.00004061668,"threshold_uncertainty_score":0.9998653},"labels":[],"label_agreement":null},{"id":"W1986537945","doi":"10.1107/s1744309110034378","title":"Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of intracellular growth locus E (IglE) protein from<i>Francisella tularensis</i>subsp.<i>novicida</i>","year":2010,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Canadian Institutes of Health Research; Michael Smith Health Research BC","keywords":"Francisella tularensis; Francisella; Virulence; Biology; Periplasmic space; Secretion; Tularemia; Microbiology; Locus (genetics); Leptospira; Pathogenicity island; Intracellular parasite; Virulence factor; Bacteria; Genetics; Virology; Gene; Escherichia coli; Biochemistry","score_opus":0.007800398873227685,"score_gpt":0.24709277321890458,"score_spread":0.2392923743456769,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986537945","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9659174,0.0011395495,0.03126652,0.0004825652,0.00017065149,0.00063066016,0.0002114564,0.000055276894,0.00012591694],"genre_scores_gemma":[0.9888134,0.0026658322,0.003417529,0.00006574519,0.00013375373,0.00008927678,0.0047430214,0.00003473714,0.00003670533],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9976719,0.0004055987,0.00071040133,0.0007076499,0.00019837498,0.00030607573],"domain_scores_gemma":[0.99725103,0.00012543082,0.0005382851,0.0011370537,0.00076841697,0.00017976318],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003692475,0.00033439655,0.00042434197,0.0004954861,0.00071221177,0.00009431795,0.00047390332,0.0006667913,0.000102482336],"category_scores_gemma":[0.00032206,0.00031947863,0.00015280223,0.0010927535,0.00093347294,0.00007143625,0.0003289053,0.0004535436,1.6186391e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027164916,0.00007608334,0.014568801,0.000031171763,0.00037272798,2.487497e-7,0.00018619907,0.00004556867,0.9821352,0.0018031683,0.000034689194,0.00047448804],"study_design_scores_gemma":[0.0037103326,0.0015752139,0.62061906,0.00012114371,0.001969287,0.00004850205,0.00077342184,0.010490611,0.26822308,0.010821809,0.07950727,0.002140298],"about_ca_topic_score_codex":0.00027630318,"about_ca_topic_score_gemma":0.00073733117,"teacher_disagreement_score":0.7139121,"about_ca_system_score_codex":0.000013604864,"about_ca_system_score_gemma":0.00006140871,"threshold_uncertainty_score":0.99992573},"labels":[],"label_agreement":null},{"id":"W1988904675","doi":"10.1107/s1744309110043393","title":"Anaerobic crystallization and initial X-ray diffraction data of biphenyl 2,3-dioxygenase from<i>Burkholderia xenovorans</i>LB400: addition of agarose improved the quality of the crystals","year":2010,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; University of British Columbia","funders":"National Center for Research Resources","keywords":"Biphenyl; Dioxygenase; Crystallization; Agarose; Materials science; Diffraction; Chemistry; Crystallography; Chromatography; Organic chemistry; Enzyme; Optics","score_opus":0.027689478829044684,"score_gpt":0.2921002949455059,"score_spread":0.2644108161164612,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988904675","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951242,0.00009666638,0.0013992689,0.0008191994,0.00029335974,0.000633108,0.0014956756,0.00003242444,0.000106082014],"genre_scores_gemma":[0.9958289,0.0007418065,0.0014496604,0.00011221722,0.000045827477,0.000012392236,0.0017846376,0.000015125089,0.000009417009],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9975532,0.0006455629,0.00095484406,0.0004345237,0.00022316887,0.00018868572],"domain_scores_gemma":[0.99657035,0.00042713282,0.0012375584,0.0015157708,0.00017347149,0.00007570077],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006503042,0.00023966694,0.00033783936,0.00010644539,0.0005535989,0.00003606668,0.0009322024,0.00033708222,0.0004634066],"category_scores_gemma":[0.0003947641,0.00016474538,0.000093541625,0.0007965748,0.0022994722,0.00049681304,0.00079942826,0.00038861597,1.2684171e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007867632,0.000069053014,0.017156687,0.000024106072,0.000061280116,2.3495076e-8,0.000311437,0.000016643102,0.98095816,0.00042175315,0.0000771447,0.0008250167],"study_design_scores_gemma":[0.0014351786,0.00017528988,0.9562268,0.000045160206,0.00017379796,0.000010403072,0.0007062531,0.004002334,0.022604534,0.0036569613,0.010531794,0.00043147526],"about_ca_topic_score_codex":0.0014243833,"about_ca_topic_score_gemma":0.0064561907,"teacher_disagreement_score":0.95835364,"about_ca_system_score_codex":0.000019964687,"about_ca_system_score_gemma":0.000040608025,"threshold_uncertainty_score":0.8472501},"labels":[],"label_agreement":null},{"id":"W1990755606","doi":"10.1107/s1744309108014851","title":"Crystallization and preliminary X-ray diffraction analysis of SeqA bound to a pair of hemimethylated GATC sites","year":2008,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Brookhaven National Laboratory; Canadian Institutes of Health Research","keywords":"SeqA protein domain; DNA; Biology; Escherichia coli; Genetics; DNA replication; Cell biology; Gene; Origin of replication","score_opus":0.01511848296022905,"score_gpt":0.2687073793519046,"score_spread":0.25358889639167553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990755606","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9879098,0.00071979186,0.010447337,0.0002566425,0.00005329032,0.00039167053,0.00010422134,0.0000459859,0.000071249124],"genre_scores_gemma":[0.9921813,0.001980513,0.0035836704,0.00008250806,0.000024855173,0.000039164588,0.0020438258,0.000020344218,0.000043808486],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983733,0.00031066462,0.0005656148,0.00043713613,0.0001232663,0.00019001079],"domain_scores_gemma":[0.99815214,0.000113131915,0.00042025215,0.00078414165,0.0004190332,0.0001113245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021251047,0.00023007655,0.00037476403,0.0006324524,0.00041012076,0.000015558766,0.00027550204,0.00035488862,0.00002729227],"category_scores_gemma":[0.0001897875,0.00023037307,0.00013766764,0.0014110015,0.0005977576,0.00003932733,0.00030483145,0.0001389774,4.0465736e-8],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016592267,0.000057986694,0.054137003,0.000028659464,0.0006137429,1.9368457e-7,0.0003498485,0.0004780046,0.94350773,0.00044705434,0.000036943587,0.00017690811],"study_design_scores_gemma":[0.0012488089,0.0023003211,0.94324875,0.000046856792,0.0012857862,0.00009042706,0.00085688307,0.010422987,0.03026623,0.0017042918,0.007729403,0.00079924584],"about_ca_topic_score_codex":0.00008239123,"about_ca_topic_score_gemma":0.00019509798,"teacher_disagreement_score":0.9132415,"about_ca_system_score_codex":0.000015321928,"about_ca_system_score_gemma":0.000041547846,"threshold_uncertainty_score":0.9394342},"labels":[],"label_agreement":null},{"id":"W1991128697","doi":"10.1107/s1744309110036894","title":"Expression, purification, crystallization and preliminary crystallographic studies of<i>cis</i>-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase from<i>Pandoraea pnomenusa</i>B-356","year":2010,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Indian Institute of Technology Roorkee; Ministry of Education, India; Council of Scientific and Industrial Research, India","keywords":"Biphenyl; Crystallization; Sodium formate; Escherichia coli; Solvent; Chemistry; Dehydrogenase; Crystallography; Polyethylene glycol; Strain (injury); Stereochemistry; Enzyme; Organic chemistry; Biochemistry; Biology","score_opus":0.015084050790862419,"score_gpt":0.2614641367857759,"score_spread":0.24638008599491348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991128697","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940745,0.0011586916,0.0018447366,0.001043114,0.00036988384,0.0007669085,0.0002615599,0.0001857228,0.00029487908],"genre_scores_gemma":[0.987177,0.005877458,0.0053783394,0.00024082435,0.00008727263,0.00006950376,0.0010914024,0.000036867918,0.00004132586],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9970608,0.00044055562,0.0009957959,0.00083624077,0.00027221828,0.00039438493],"domain_scores_gemma":[0.9970917,0.0004234701,0.0007749871,0.0012130847,0.00024175558,0.00025497033],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00048634445,0.00047048557,0.0005176911,0.00033329177,0.0010340799,0.00008613767,0.00068594475,0.000539037,0.0005511189],"category_scores_gemma":[0.00031223043,0.0004215736,0.0001311158,0.0010851633,0.0026747892,0.0006720239,0.00070322433,0.0005488891,0.000001350085],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011256692,0.00008233607,0.051878512,0.000030411524,0.00011034067,4.962819e-7,0.00080627674,0.000021681732,0.94522595,0.00073640456,0.00028473447,0.0007102671],"study_design_scores_gemma":[0.00936423,0.0023633568,0.55016464,0.00041947182,0.0012779534,0.0003662293,0.0065739127,0.008342325,0.09301757,0.07320275,0.2494042,0.0055033793],"about_ca_topic_score_codex":0.00016301403,"about_ca_topic_score_gemma":0.0009167911,"teacher_disagreement_score":0.8522084,"about_ca_system_score_codex":0.000038205435,"about_ca_system_score_gemma":0.000034873116,"threshold_uncertainty_score":0.99982363},"labels":[],"label_agreement":null},{"id":"W1991257573","doi":"10.1107/s1744309109000360","title":"Preliminary X-ray crystallographic analysis of ornithine acetyltransferase (Rv1653) from<i>Mycobacterium tuberculosis</i>","year":2009,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Amino Acid Enzymes and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Lawrence Berkeley National Laboratory; Canadian Institutes of Health Research; Alberta Heritage Foundation for Medical Research; National Institutes of Health; National Science Foundation; Government of Canada; U.S. Department of Energy; Australian Government; Fondation pour la Recherche Médicale","keywords":"Mycobacterium tuberculosis; Acetyltransferase; Crystallography; Tuberculosis; Microbiology; Chemistry; Biology; Biochemistry; Medicine; Pathology; Gene","score_opus":0.007896640610190646,"score_gpt":0.25078471582480405,"score_spread":0.2428880752146134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991257573","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98439467,0.003059642,0.010383793,0.0008115938,0.00016526092,0.00036215436,0.0004242076,0.00006874057,0.00032991695],"genre_scores_gemma":[0.98181903,0.008719547,0.002083237,0.0005374269,0.00012282793,0.000028993758,0.006631877,0.00002034369,0.000036688154],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99789107,0.00042008844,0.00067581073,0.0005651231,0.00013078307,0.00031713746],"domain_scores_gemma":[0.9978612,0.0000999076,0.00033292873,0.0012339221,0.00032762438,0.00014439873],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00022385117,0.0003425209,0.0005075422,0.00056120334,0.00048594034,0.000030243717,0.00053403346,0.00054264086,0.000086582666],"category_scores_gemma":[0.000081350605,0.00032012525,0.0003239804,0.0014111163,0.0006076467,0.00004354166,0.00019487976,0.00031364328,8.8229555e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019818684,0.000075959346,0.029746719,0.0000113035785,0.0011431006,2.7977714e-7,0.00022838649,0.00017686191,0.9665451,0.0010192144,0.00009456631,0.00076029706],"study_design_scores_gemma":[0.0014373,0.0010942904,0.9317886,0.000030292675,0.0025242865,0.000015804946,0.00052129774,0.0013977037,0.002557788,0.0024436133,0.055393245,0.0007957301],"about_ca_topic_score_codex":0.00011837757,"about_ca_topic_score_gemma":0.00028928238,"teacher_disagreement_score":0.96398735,"about_ca_system_score_codex":0.000011044922,"about_ca_system_score_gemma":0.00004209073,"threshold_uncertainty_score":0.9999251},"labels":[],"label_agreement":null},{"id":"W1991344213","doi":"10.1107/s1744309108043091","title":"Expression, purification and preliminary diffraction studies of CmlS","year":2009,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Pesticide and Herbicide Environmental Studies","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Queen's University","funders":"","keywords":"Escherichia coli; Operon; Diffraction; Chemistry; Crystallography; Phosphonate; Biochemistry; Gene; Physics; Optics","score_opus":0.021825572318223418,"score_gpt":0.28748067310875536,"score_spread":0.26565510079053195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991344213","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937203,0.0022476967,0.0009622495,0.002016672,0.00005998589,0.00028517836,0.000011942567,0.00006080709,0.0006351614],"genre_scores_gemma":[0.9895913,0.0077818953,0.0022894542,0.00016247806,0.000020810705,0.000026982992,0.0000894697,0.000006580067,0.00003100966],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99893737,0.00016069373,0.0003559091,0.00029549722,0.00009893037,0.00015157516],"domain_scores_gemma":[0.9990752,0.0001667116,0.00025818255,0.00040668514,0.000031738735,0.00006150384],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014348858,0.00016903364,0.0002123822,0.000092144124,0.0006734812,0.000016088763,0.00018971521,0.00014033024,0.000120712895],"category_scores_gemma":[0.00008663062,0.0001456992,0.000039071216,0.00028236356,0.0010516862,0.00035129246,0.00025707023,0.00015711146,3.0659143e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005813682,0.00007198563,0.07666392,0.000013602072,0.000044801003,1.694746e-7,0.0007997954,0.000050101942,0.9155265,0.0013486783,0.00019170444,0.005230608],"study_design_scores_gemma":[0.0002964181,0.0004721849,0.96890116,0.000026644604,0.00006155756,0.000024672536,0.0008763301,0.0003232241,0.0007138669,0.022575157,0.005524983,0.00020380378],"about_ca_topic_score_codex":0.000047621877,"about_ca_topic_score_gemma":0.00006083788,"teacher_disagreement_score":0.9148126,"about_ca_system_score_codex":0.00003681462,"about_ca_system_score_gemma":0.0000032866863,"threshold_uncertainty_score":0.5941441},"labels":[],"label_agreement":null},{"id":"W1991811356","doi":"10.1107/s1744309108032399","title":"Purification, crystallization and preliminary X-ray diffraction analysis of the Whirly domain of StWhy2 in complex with single-stranded DNA","year":2008,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Brookhaven National Laboratory; Canadian Institutes of Health Research; U.S. Department of Energy; Fonds Québécois de la Recherche sur la Nature et les Technologies; National Institute of Biomedical Imaging and Bioengineering","keywords":"Crystallography; Crystallization; Resolution (logic); DNA; Diffraction; Materials science; X-ray crystallography; Chemistry; Optics; Physics; Biochemistry","score_opus":0.013565250720864827,"score_gpt":0.2343855331450797,"score_spread":0.22082028242421486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991811356","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923521,0.00022767682,0.006514463,0.00035219023,0.00002205784,0.00034878176,0.000080322505,0.000011432521,0.00009094514],"genre_scores_gemma":[0.9948158,0.0013146617,0.002406536,0.000037193695,0.000012156113,0.00002483051,0.0013618346,0.000013301819,0.000013671958],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99869806,0.00027457724,0.00049268367,0.00029816822,0.000098747834,0.0001377556],"domain_scores_gemma":[0.9984929,0.000060039194,0.00048128644,0.00067890843,0.00024465885,0.00004221219],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001443135,0.0001734581,0.00026900147,0.00030611636,0.00034438676,0.0000135599785,0.00028898826,0.0002214164,0.0000091442225],"category_scores_gemma":[0.000041694995,0.00013923616,0.0000825496,0.0010340986,0.000915872,0.00002690034,0.00014314914,0.00012562222,5.994866e-9],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012458945,0.00007693261,0.13914117,0.000023401999,0.00026325835,7.535627e-8,0.00042391598,0.0011920349,0.85792536,0.0007569316,0.000007949531,0.00006436926],"study_design_scores_gemma":[0.00066904264,0.0003578197,0.9919816,0.000015218139,0.00019934989,0.00002746146,0.00053033326,0.0037260565,0.00061030063,0.0005713119,0.0011319271,0.00017953911],"about_ca_topic_score_codex":0.00006662352,"about_ca_topic_score_gemma":0.0012195698,"teacher_disagreement_score":0.85731506,"about_ca_system_score_codex":0.000016879228,"about_ca_system_score_gemma":0.000042003354,"threshold_uncertainty_score":0.5677886},"labels":[],"label_agreement":null},{"id":"W1992497219","doi":"10.1107/s1744309105024012","title":"Cloning, recombinant production, crystallization and preliminary X-ray diffraction studies of a family 84 glycoside hydrolase from<i>Clostridium perfringens</i>","year":2005,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Clostridium perfringens; Escherichia coli; Recombinant DNA; Crystallization; Cloning (programming); Clostridium; Biology; Microbiology; Biochemistry; Chemistry; Bacteria; Gene; Genetics; Organic chemistry","score_opus":0.02320276662687961,"score_gpt":0.28152485085739065,"score_spread":0.25832208423051106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992497219","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9882424,0.0053383214,0.002627881,0.001952675,0.0008834372,0.0005535252,0.00006754214,0.00021340609,0.00012081924],"genre_scores_gemma":[0.9842468,0.009139322,0.005470201,0.00016086188,0.00027420037,0.00008139718,0.00053081405,0.00003208369,0.00006431912],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99744844,0.00048471527,0.0008470796,0.0007031186,0.0002002431,0.00031640683],"domain_scores_gemma":[0.99745566,0.00033493174,0.0006988887,0.00084976526,0.00054024777,0.000120539196],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00039725745,0.00037627047,0.00046231266,0.00037406554,0.0011674599,0.00008043432,0.00032897692,0.00035294355,0.000074549374],"category_scores_gemma":[0.00032762383,0.00034038644,0.000091959206,0.00059956353,0.0010340421,0.0009062062,0.00031254167,0.00035709247,5.564767e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022014693,0.000062748775,0.0042438786,0.00005488384,0.00011479585,2.865801e-7,0.0012217024,0.00036705539,0.991302,0.0009911769,0.00030430773,0.0011170289],"study_design_scores_gemma":[0.008560075,0.005268284,0.49899465,0.0010619787,0.0025740443,0.00062810036,0.016173368,0.018517178,0.15232034,0.06265635,0.22846372,0.004781909],"about_ca_topic_score_codex":0.0002056002,"about_ca_topic_score_gemma":0.00042196253,"teacher_disagreement_score":0.8389816,"about_ca_system_score_codex":0.000080482714,"about_ca_system_score_gemma":0.000050294944,"threshold_uncertainty_score":0.9999048},"labels":[],"label_agreement":null},{"id":"W1992727236","doi":"10.1107/s1744309109008379","title":"Crystallization and preliminary crystallographic analysis of a chitinase from<i>Clonostachys rosea</i>","year":2009,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Studies on Chitinases and Chitosanases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Yunnan Provincial Science and Technology Department; National Natural Science Foundation of China; National Key Research and Development Program of China; McMaster University","keywords":"Chitinase; Crystallization; Crystallography; Fungus; Chemistry; Stereochemistry; Botany; Biology; Enzyme; Organic chemistry","score_opus":0.009678144565190845,"score_gpt":0.26616330957023077,"score_spread":0.25648516500503993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992727236","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9874803,0.004384656,0.0057874965,0.0008405971,0.00007330102,0.000368547,0.0007131953,0.000065584376,0.00028635614],"genre_scores_gemma":[0.97996277,0.009164319,0.001573342,0.00039159262,0.00007975102,0.000031207714,0.008765776,0.000019187471,0.000012058828],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980862,0.00027830442,0.00059646694,0.0006198098,0.00013131808,0.00028788781],"domain_scores_gemma":[0.99814373,0.00013118946,0.00041893803,0.0009183677,0.0002445759,0.0001431898],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00012413407,0.0003418395,0.00045871563,0.0005356326,0.0006400391,0.000055336233,0.00037606197,0.00034706914,0.000021162128],"category_scores_gemma":[0.00012676354,0.00033356904,0.00021843096,0.00123934,0.00078146334,0.000040068342,0.0002957348,0.00019441289,2.6933288e-8],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002832047,0.00012514635,0.07702175,0.000019949439,0.0011838633,6.627852e-7,0.00025893346,0.00018088217,0.9166162,0.0022569057,0.000054572578,0.001997928],"study_design_scores_gemma":[0.0012955603,0.0016979318,0.9718739,0.000027547974,0.0015504886,0.0000266901,0.0010794097,0.0028443385,0.0023506756,0.00485683,0.01165602,0.0007406429],"about_ca_topic_score_codex":0.00015093369,"about_ca_topic_score_gemma":0.00044625395,"teacher_disagreement_score":0.9142655,"about_ca_system_score_codex":0.000009917106,"about_ca_system_score_gemma":0.000033487795,"threshold_uncertainty_score":0.9999116},"labels":[],"label_agreement":null},{"id":"W1993517202","doi":"10.1107/s174430911005092x","title":"Crystallization and preliminary diffraction analysis of truncated human pleckstrin","year":2011,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Erythrocyte Function and Pathophysiology","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Institute of Biomedical Imaging and Bioengineering; Canadian Institutes of Health Research","keywords":"Pleckstrin homology domain; IRS1; Phosphorylation; Biochemistry; Chemistry; Biology; Insulin receptor; Insulin","score_opus":0.034158676625056186,"score_gpt":0.2934045451647711,"score_spread":0.25924586853971493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993517202","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99315995,0.00038410482,0.0044910507,0.00023266983,0.00010043401,0.00043671316,0.000052029893,0.00014743443,0.0009955852],"genre_scores_gemma":[0.99398875,0.0017953197,0.0016305557,0.00014050609,0.00003225014,0.000039193426,0.0022934065,0.000019038078,0.000061002902],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983563,0.00031441072,0.00061003043,0.00041437967,0.000103353326,0.00020151823],"domain_scores_gemma":[0.99822813,0.00014466423,0.00043161784,0.0007014179,0.00035950184,0.00013465578],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017585617,0.00024108325,0.0004998928,0.0010480372,0.0005474349,0.000016261733,0.000157824,0.0004252052,0.000282914],"category_scores_gemma":[0.000086092274,0.00022262236,0.00015247274,0.0014805588,0.0008201865,0.0002331829,0.00015473887,0.00032540585,1.0845101e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051917107,0.00018242816,0.20346645,0.00007903121,0.001348971,8.3380854e-7,0.0011197485,0.000016033246,0.7807484,0.011596789,0.000030378314,0.00089172553],"study_design_scores_gemma":[0.0009293239,0.0011964345,0.98771465,0.00002633871,0.00163364,0.00006537311,0.00051462214,0.0025564772,0.0002306533,0.0029812036,0.0019139819,0.00023728787],"about_ca_topic_score_codex":0.00021809887,"about_ca_topic_score_gemma":0.00021674234,"teacher_disagreement_score":0.78424823,"about_ca_system_score_codex":0.000028606903,"about_ca_system_score_gemma":0.000032823646,"threshold_uncertainty_score":0.9078276},"labels":[],"label_agreement":null},{"id":"W1994509491","doi":"10.1107/s174430911100515x","title":"Structure of<i>Francisella tularensis</i>peptidyl-tRNA hydrolase","year":2011,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Canada Research Chairs; University Health Network","funders":"","keywords":"Francisella tularensis; Hydrolase; Transfer RNA; Tularemia; Enzyme; Biology; Biochemistry; Rifamycin; Bacteria; Francisella; Cloning (programming); Active site; Chemistry; Microbiology; Antibiotics; Genetics; RNA; Gene; Virulence","score_opus":0.017798374458269817,"score_gpt":0.2617233519403479,"score_spread":0.2439249774820781,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994509491","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941846,0.0010311881,0.0023909784,0.0001154639,0.00020114734,0.00031324415,0.0001879208,0.000037053764,0.0015383995],"genre_scores_gemma":[0.9942459,0.0022338433,0.0023648704,0.000094935946,0.00009421472,0.000014293157,0.00089414977,0.00002460547,0.000033197128],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985443,0.00026133042,0.00042208272,0.00039622627,0.00010349713,0.00027257277],"domain_scores_gemma":[0.9983344,0.00003956251,0.00023274432,0.0009563573,0.00030731905,0.00012963875],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014050133,0.00023469949,0.0002501181,0.00019097391,0.00041076227,0.000023179124,0.00050608104,0.00040151048,0.00017621549],"category_scores_gemma":[0.00010142639,0.00021436038,0.000118548465,0.00039939387,0.0008434699,0.000021068123,0.0003256112,0.00023581956,1.9573595e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015694786,0.00003163337,0.013624988,0.00002225398,0.00011045169,2.2930064e-7,0.00017755313,0.000003528236,0.9827566,0.00227472,0.00007383794,0.00076721667],"study_design_scores_gemma":[0.0061885216,0.0037619926,0.31439966,0.0001254601,0.00048039775,0.00045950085,0.0010191181,0.0012828441,0.30794084,0.040383197,0.3210191,0.002939342],"about_ca_topic_score_codex":0.00010888371,"about_ca_topic_score_gemma":0.0004015601,"teacher_disagreement_score":0.67481583,"about_ca_system_score_codex":0.000009118432,"about_ca_system_score_gemma":0.00005725054,"threshold_uncertainty_score":0.87413627},"labels":[],"label_agreement":null},{"id":"W1994956732","doi":"10.1107/s1744309113028698","title":"A family portrait: structural comparison of the Whirly proteins from<i>Arabidopsis thaliana</i>and<i>Solanum tuberosum</i>","year":2013,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Brookhaven National Laboratory; Natural Sciences and Engineering Research Council of Canada; U.S. Department of Energy","keywords":"Arabidopsis thaliana; Solanum tuberosum; DNA; Biology; Genome; Arabidopsis; DNA-binding protein; DNA repair; Genetics; Cell biology; Computational biology; Gene; Botany; Transcription factor","score_opus":0.01216601746008126,"score_gpt":0.2588945672431163,"score_spread":0.24672854978303507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994956732","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99498063,0.0010544077,0.0016197937,0.0011283748,0.00016223772,0.0006133433,0.0001555946,0.000031325824,0.00025430988],"genre_scores_gemma":[0.9971248,0.00071841513,0.0011484995,0.0002854943,0.000052924464,0.000100929916,0.0005124214,0.000018654555,0.000037894224],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986458,0.00020685361,0.00044021104,0.00037695933,0.00010691692,0.00022326203],"domain_scores_gemma":[0.9984647,0.00005089247,0.00033556623,0.0008252852,0.0002318189,0.00009171516],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000094790776,0.00023560376,0.00025780738,0.000074074196,0.00057450274,0.000055631757,0.0005423969,0.0003171872,0.000038245336],"category_scores_gemma":[0.00007634506,0.00017581166,0.000099790115,0.0002845419,0.0006840904,0.000036419344,0.00042984015,0.00023690386,1.2205076e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021532873,0.000019142293,0.021971278,0.000016403328,0.00008777079,2.4353545e-8,0.00018626185,0.00000556954,0.9758441,0.0012317986,0.00007006575,0.0005460423],"study_design_scores_gemma":[0.0031085082,0.0015088362,0.6450829,0.00019503839,0.0005112551,0.00015787594,0.0051479135,0.0056509664,0.20884407,0.06709351,0.060741574,0.001957549],"about_ca_topic_score_codex":0.00063366356,"about_ca_topic_score_gemma":0.00062871515,"teacher_disagreement_score":0.767,"about_ca_system_score_codex":0.0000084398125,"about_ca_system_score_gemma":0.000050337527,"threshold_uncertainty_score":0.7169391},"labels":[],"label_agreement":null},{"id":"W1996640009","doi":"10.1107/s1744309106006403","title":"Expression, purification and crystallization of a birnavirus-encoded protease, VP4, from blotched snakehead virus (BSNV)","year":2006,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Crystallization; Biology; Escherichia coli; Capsid; Proteases; Virus; Protease; Serine protease; Chemistry; Molecular biology; Biochemistry; Virology; Gene; Enzyme","score_opus":0.018280960534920166,"score_gpt":0.28156572326102497,"score_spread":0.2632847627261048,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996640009","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98630494,0.002983944,0.007792489,0.0010071306,0.0000967612,0.0009589818,0.0002629249,0.00020438398,0.00038842743],"genre_scores_gemma":[0.9911364,0.0019544384,0.0035387063,0.00012957538,0.000091576345,0.00013947749,0.0029375025,0.000030802737,0.000041568946],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99774253,0.0004982984,0.0007838555,0.00054391485,0.00016689287,0.00026451054],"domain_scores_gemma":[0.99785817,0.00019863581,0.00053424004,0.00088324037,0.00037166176,0.000154052],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001986401,0.00032488248,0.00046907054,0.00040528827,0.00068113924,0.0000442133,0.00023583787,0.0005099564,0.00013169722],"category_scores_gemma":[0.00023033803,0.00029181817,0.00011767434,0.00066065835,0.0010896372,0.0003533023,0.00014614227,0.0003458843,2.977192e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030466274,0.00022156409,0.08745552,0.000067378365,0.00010159207,7.460332e-7,0.00016322541,0.000017115886,0.90364695,0.0076500177,0.000071328905,0.00029989443],"study_design_scores_gemma":[0.0038641884,0.0008529907,0.8972746,0.00025376028,0.0006728942,0.000096936536,0.0005383161,0.002007054,0.016851341,0.060956903,0.015898144,0.00073283573],"about_ca_topic_score_codex":0.0006216176,"about_ca_topic_score_gemma":0.0005158444,"teacher_disagreement_score":0.88679564,"about_ca_system_score_codex":0.000030053314,"about_ca_system_score_gemma":0.000086496744,"threshold_uncertainty_score":0.9999534},"labels":[],"label_agreement":null},{"id":"W1996749506","doi":"10.1107/s1744309109027535","title":"Preliminary X-ray crystallographic analysis of sulfide:quinone oxidoreductase from<i>Acidithiobacillus ferrooxidans</i>","year":2009,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Metal Extraction and Bioleaching","field":"Engineering","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; Alberta Heritage Foundation for Medical Research; National Key Research and Development Program of China; Fondation pour la Recherche Médicale","keywords":"Acidithiobacillus ferrooxidans; Crystallography; Sulfide; Materials science; Chemistry; Metallurgy; Bioleaching; Copper","score_opus":0.013692631705351451,"score_gpt":0.2540621716765634,"score_spread":0.24036953997121197,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996749506","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9799468,0.0025273801,0.014633738,0.00056471926,0.00036717148,0.00035279748,0.00028246106,0.00048244212,0.00084251194],"genre_scores_gemma":[0.9906965,0.0035670476,0.0029002484,0.00016446934,0.00006178175,0.000022586875,0.0025476029,0.000022704491,0.000017086548],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.997903,0.0003150239,0.0008356799,0.00044079305,0.00017795565,0.00032756568],"domain_scores_gemma":[0.99800247,0.00024633924,0.00029751947,0.0010741125,0.00020492796,0.00017464769],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00026113764,0.00038204534,0.00059419894,0.0012009401,0.00049107464,0.00006631765,0.00055377325,0.00043305135,0.00015647626],"category_scores_gemma":[0.0000702242,0.00036267797,0.00031131084,0.002621655,0.0005120223,0.00042932224,0.00009860948,0.0005163854,2.1896813e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008279788,0.00007735887,0.005132449,0.00002077918,0.0012515516,8.642301e-7,0.0004256522,0.0036906938,0.9842322,0.0023846596,0.00009864143,0.0026023902],"study_design_scores_gemma":[0.0019519862,0.0010823688,0.8083017,0.000107116815,0.0041240086,0.00006070399,0.0016842083,0.117626384,0.0016628336,0.01575741,0.045661103,0.0019801827],"about_ca_topic_score_codex":0.00012492937,"about_ca_topic_score_gemma":0.000276304,"teacher_disagreement_score":0.98256934,"about_ca_system_score_codex":0.00003724449,"about_ca_system_score_gemma":0.000020612526,"threshold_uncertainty_score":0.9998825},"labels":[],"label_agreement":null},{"id":"W1998983115","doi":"10.1107/s1744309106021968","title":"Binding of adenine to Stx2, the protein toxin from<i>Escherichia coli</i>O157:H7","year":2006,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Toxin Mechanisms and Immunotoxins","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Calgary","funders":"","keywords":"Protein subunit; Chemistry; Escherichia coli; Adenosine; Active site; Toxin; Biochemistry; Shiga toxin; Stereochemistry; Enzyme; Gene","score_opus":0.010520976320706742,"score_gpt":0.23857888368690106,"score_spread":0.2280579073661943,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998983115","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98955023,0.0014820446,0.0044435635,0.0024852462,0.00033031107,0.00084901665,0.00030840022,0.00012789409,0.00042330593],"genre_scores_gemma":[0.99570405,0.00024382933,0.0019347058,0.00020810869,0.000054337983,0.00014115858,0.0013324809,0.000024462972,0.00035689044],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980203,0.0005618864,0.0006365512,0.00038922,0.000057374848,0.00033468893],"domain_scores_gemma":[0.9981533,0.00025933154,0.00037345797,0.000978906,0.00019730146,0.000037703874],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002540431,0.0002821255,0.00034543689,0.0002656654,0.0010791006,0.000047026217,0.00076337426,0.0004233539,0.00033979738],"category_scores_gemma":[0.00008980039,0.00021785215,0.000119556826,0.0008233081,0.0007485451,0.00017745042,0.0003773095,0.0004687354,0.000002653563],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008218429,0.00005179358,0.0024634702,0.000007651409,0.00013270929,1.2223015e-7,0.00022178133,0.000014783666,0.9795444,0.016791979,0.0002814748,0.0004076595],"study_design_scores_gemma":[0.004748458,0.0016916144,0.1903948,0.00024021401,0.00048173458,0.00006455867,0.0032694563,0.00034642036,0.18127938,0.043606658,0.5720072,0.0018695402],"about_ca_topic_score_codex":0.001092985,"about_ca_topic_score_gemma":0.0009087984,"teacher_disagreement_score":0.79826504,"about_ca_system_score_codex":0.000029746414,"about_ca_system_score_gemma":0.00004373396,"threshold_uncertainty_score":0.88837534},"labels":[],"label_agreement":null},{"id":"W2003786257","doi":"10.1107/s1744309113012220","title":"Structure of the T6SS lipoprotein TssJ1 from<i>Pseudomonas aeruginosa</i>","year":2013,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Pseudomonas aeruginosa; Serratia marcescens; Type VI secretion system; Escherichia coli; Secretion; Microbiology; Effector; Bacteria; Function (biology); Biology; Chemistry; Plasmid; Cell biology; Genetics; Biochemistry; Virulence; Gene","score_opus":0.007081826506381662,"score_gpt":0.23519011592604336,"score_spread":0.2281082894196617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003786257","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964198,0.00074145495,0.0009166829,0.000671103,0.00023570556,0.000611758,0.00016331133,0.000028165683,0.0002120047],"genre_scores_gemma":[0.99586755,0.00085646944,0.0020925715,0.00019630081,0.00010633997,0.000030345,0.000774789,0.000019945968,0.000055685246],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99861825,0.00030843564,0.00041129513,0.00035756791,0.00009947114,0.00020499103],"domain_scores_gemma":[0.9980059,0.00005937615,0.00034607557,0.001268486,0.00025383278,0.00006631526],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006131037,0.00022212636,0.00020688759,0.000075402495,0.00047014887,0.000048493053,0.00073857856,0.00037704885,0.00014175341],"category_scores_gemma":[0.00008707459,0.00016653533,0.000111714566,0.00034435512,0.0009792193,0.000030420983,0.00045167093,0.00023215036,2.0857368e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020749098,0.000014207949,0.06285591,0.000010377424,0.00008639632,2.4313767e-8,0.00006243996,0.000011515778,0.9355273,0.0007443973,0.00018206814,0.00048460782],"study_design_scores_gemma":[0.0010789022,0.0003327294,0.86504966,0.000067061934,0.0001270661,0.000044814155,0.00068323046,0.00025740077,0.05298602,0.020508261,0.058144473,0.0007203676],"about_ca_topic_score_codex":0.0004449295,"about_ca_topic_score_gemma":0.00074601284,"teacher_disagreement_score":0.8825413,"about_ca_system_score_codex":0.00001150952,"about_ca_system_score_gemma":0.000043030035,"threshold_uncertainty_score":0.6791114},"labels":[],"label_agreement":null},{"id":"W2004420904","doi":"10.1107/s1744309110048803","title":"Expression, purification and crystallization of VP4 protease from<i>Tellina</i>virus 1","year":2010,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Michael Smith Health Research BC; University of Saskatchewan; Canadian Light Source","keywords":"Crystallization; Protease; Biology; Ammonium sulfate; Proteolysis; Crystallography; Chromatography; Biochemistry; Chemistry; Enzyme; Organic chemistry","score_opus":0.015839417109681026,"score_gpt":0.2837570932710212,"score_spread":0.2679176761613402,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004420904","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99067557,0.0011466075,0.0050997064,0.0015759475,0.000160935,0.0007748129,0.00017354758,0.0001444056,0.00024844595],"genre_scores_gemma":[0.9904567,0.0025965467,0.0047302283,0.0002235103,0.00010069428,0.00009766132,0.001743882,0.000023981693,0.000026808304],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983481,0.00025821247,0.00058955676,0.00046136792,0.00012899777,0.00021374956],"domain_scores_gemma":[0.9979459,0.00016899106,0.0004051043,0.0009299991,0.00034865935,0.00020137016],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018693336,0.00026143354,0.00036472105,0.00032002048,0.0006224143,0.000035579065,0.0002479816,0.00052092905,0.00017906487],"category_scores_gemma":[0.00027858256,0.00023274303,0.000093111405,0.00046972928,0.0012474596,0.00032981366,0.00017606023,0.00051637035,3.020466e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023060545,0.00011288525,0.088082775,0.000054585176,0.000076145734,4.7274546e-7,0.00023156298,0.0000029535508,0.9060655,0.0042898804,0.00004839353,0.00080422004],"study_design_scores_gemma":[0.0025976482,0.0006479722,0.91927856,0.00014039602,0.00053279125,0.00012256336,0.00046660053,0.0023073019,0.014145945,0.03243622,0.026694333,0.00062964496],"about_ca_topic_score_codex":0.00013928271,"about_ca_topic_score_gemma":0.00024083193,"teacher_disagreement_score":0.89191955,"about_ca_system_score_codex":0.000011155152,"about_ca_system_score_gemma":0.00006691379,"threshold_uncertainty_score":0.9490985},"labels":[],"label_agreement":null},{"id":"W2004452168","doi":"10.1107/s1744309112047422","title":"Exploring the cross-reactivity of S25-2: complex with a 5,6-dehydro-Kdo disaccharide","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Carbohydrate Chemistry and Synthesis","field":"Chemistry","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Canadian Institutes of Health Research","keywords":"Disaccharide; Chemistry; Stereochemistry; Residue (chemistry); Ligand (biochemistry); Biochemistry; Receptor","score_opus":0.0652120056619545,"score_gpt":0.2900494222348828,"score_spread":0.22483741657292827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004452168","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960364,0.00023445234,0.00037195877,0.00055546535,0.00007328787,0.000120410456,0.00009281269,0.0001040767,0.0024111364],"genre_scores_gemma":[0.9982877,0.00073366263,0.000301946,0.000039394345,0.00011544559,0.00010424067,0.00036461744,0.000020977852,0.00003206285],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99877197,0.00013200233,0.00039613096,0.00025898035,0.00012884209,0.0003121064],"domain_scores_gemma":[0.99783224,0.0005152575,0.0003340079,0.0010439481,0.00016383734,0.000110717236],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022125435,0.00024573182,0.00026707712,0.000093079376,0.0009124536,0.000056285902,0.00050590903,0.00016549836,0.00025750077],"category_scores_gemma":[0.00010500661,0.0001749976,0.00010374659,0.00048607032,0.0013131809,0.0006014863,0.00023977591,0.0003725927,1.2918125e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006896534,0.00005355582,0.0950417,0.00004974324,0.00012600094,9.561035e-8,0.00055853924,0.000017845843,0.9015735,0.0019157694,0.000006225438,0.00058810326],"study_design_scores_gemma":[0.0022961556,0.00019281491,0.75450045,0.00021283216,0.0006912265,0.00046941073,0.005587166,0.0023168526,0.12803428,0.0048142066,0.098994575,0.0018900587],"about_ca_topic_score_codex":0.00015018697,"about_ca_topic_score_gemma":0.00013630238,"teacher_disagreement_score":0.7735392,"about_ca_system_score_codex":0.0000331499,"about_ca_system_score_gemma":0.000024080455,"threshold_uncertainty_score":0.71361953},"labels":[],"label_agreement":null},{"id":"W2004934472","doi":"10.1107/s1744309112020222","title":"Expression, purification, crystallization and preliminary crystallographic analysis of the phosphoglycerate kinase from<i>Acinetobacter baumannii</i>","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta","funders":"University of British Columbia","keywords":"Crystallization; Acinetobacter baumannii; Microbiology; Crystallography; Materials science; Computational biology; Chemistry; Biology; Bacteria; Genetics; Organic chemistry","score_opus":0.01042258811638596,"score_gpt":0.25121540857427177,"score_spread":0.2407928204578858,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004934472","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9891757,0.003620198,0.005804746,0.00028236475,0.00021969918,0.0005140671,0.00023080871,0.000040556493,0.000111904636],"genre_scores_gemma":[0.9917239,0.0036668903,0.0017551946,0.00017364784,0.000098491706,0.00006175533,0.0024443776,0.000028857785,0.000046905392],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9978921,0.0005093648,0.00064118573,0.0004910804,0.0001488506,0.00031746025],"domain_scores_gemma":[0.99744934,0.00011816125,0.00058028626,0.0013952113,0.00031607065,0.00014094944],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00027017694,0.00031871756,0.00035409286,0.00031616748,0.0007095252,0.000059961214,0.00054948026,0.0004264174,0.00005638484],"category_scores_gemma":[0.00012367421,0.00025654223,0.00018588682,0.0012490213,0.0011091311,0.00008445533,0.00049237936,0.00022120087,6.60971e-8],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009265337,0.00004751693,0.3658979,0.000014748048,0.00037428513,3.2860797e-8,0.00022104545,0.00004081598,0.63249236,0.00062221044,0.00007535819,0.00012107558],"study_design_scores_gemma":[0.00047697203,0.00015362803,0.9690235,0.000034229815,0.00071687024,0.000010061817,0.0004296625,0.0003869792,0.005286734,0.0006229778,0.022480898,0.00037744272],"about_ca_topic_score_codex":0.00007863729,"about_ca_topic_score_gemma":0.00020369056,"teacher_disagreement_score":0.6272056,"about_ca_system_score_codex":0.00001688872,"about_ca_system_score_gemma":0.00003536627,"threshold_uncertainty_score":0.9999887},"labels":[],"label_agreement":null},{"id":"W2006301295","doi":"10.1107/s1744309105005920","title":"Structure of the pseudouridine synthase RsuA from<i>Haemophilus influenzae</i>","year":2005,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"","keywords":"Pseudouridine; Escherichia coli; RNA; Chemistry; Haemophilus influenzae; Stereochemistry; Ribosomal RNA; Biochemistry; Uridine; Biology; Crystallography; Gene","score_opus":0.011099655752466032,"score_gpt":0.2623046146540486,"score_spread":0.25120495890158256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006301295","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935246,0.0018041282,0.0011149477,0.0025073497,0.00016547086,0.00027939072,0.00037100326,0.000028133049,0.00020497535],"genre_scores_gemma":[0.99548733,0.0016197666,0.0013863514,0.00043644835,0.00020817119,0.000021356918,0.0007763432,0.000017961693,0.00004628426],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99879277,0.00021406372,0.0003907542,0.00033298275,0.0000950552,0.00017438707],"domain_scores_gemma":[0.9981255,0.00004781194,0.00030644704,0.0012348251,0.00021823884,0.000067199035],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000074812735,0.00019794061,0.00017591033,0.00009046438,0.0005589581,0.000029343102,0.0006328517,0.00029821962,0.0000753242],"category_scores_gemma":[0.000080851765,0.00015296665,0.00011236534,0.00038398468,0.00069281715,0.000027701904,0.00032363166,0.00021915199,1.0984371e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004097182,0.000024203871,0.014955074,0.0000061364835,0.000093720664,2.062001e-8,0.00007791348,0.00017499516,0.98154694,0.001729706,0.00027871985,0.0010715895],"study_design_scores_gemma":[0.0025811603,0.0004054096,0.24998635,0.00007380938,0.00033457,0.00010143512,0.00050178636,0.0021623138,0.077596955,0.012507193,0.65263057,0.0011184373],"about_ca_topic_score_codex":0.000094617986,"about_ca_topic_score_gemma":0.0007641676,"teacher_disagreement_score":0.90395,"about_ca_system_score_codex":0.000016832802,"about_ca_system_score_gemma":0.00005736678,"threshold_uncertainty_score":0.6237799},"labels":[],"label_agreement":null},{"id":"W2007594836","doi":"10.1107/s1744309109036616","title":"The structure of<i>Staphylococcus aureus</i>phosphopantetheine adenylyltransferase in complex with 3′-phosphoadenosine 5′-phosphosulfate reveals a new ligand-binding mode","year":2009,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Neurological diseases and metabolism","field":"Neuroscience","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"International Development Research Centre","keywords":"Ligand (biochemistry); Stereochemistry; Coenzyme A; Cofactor; Chemistry; Transferase; Binding site; Biochemistry; Biology; Enzyme; Receptor","score_opus":0.020420596970341643,"score_gpt":0.28055251520499835,"score_spread":0.2601319182346567,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007594836","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99189126,0.0012182364,0.00090973463,0.0047881776,0.000095861884,0.0006896429,0.00021459708,0.00010477815,0.00008768915],"genre_scores_gemma":[0.9933611,0.0050196503,0.00042154035,0.00091536436,0.00004174443,0.000011606044,0.0001787406,0.000019279212,0.000030976946],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977649,0.0004068501,0.00064901984,0.0005459899,0.00019594301,0.00043732428],"domain_scores_gemma":[0.9980801,0.00047401135,0.00034095361,0.00079029,0.00012781838,0.00018685914],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011730904,0.00034682252,0.00041217683,0.0002320683,0.0009432396,0.00010182262,0.00076456426,0.00023112567,0.00003801735],"category_scores_gemma":[0.00022830279,0.00023078315,0.00010671884,0.0014420566,0.00086451136,0.0002702033,0.00012608655,0.0005387968,1.0472733e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003931079,0.000048833434,0.0043270206,0.000009085683,0.000019994286,0.000002022163,0.00018094611,0.000090008165,0.9783539,0.015137305,0.000075255295,0.001362518],"study_design_scores_gemma":[0.009302119,0.003375555,0.50632316,0.00024385627,0.00043289867,0.0002835014,0.0007255991,0.0040994026,0.17312968,0.25263807,0.047079306,0.002366818],"about_ca_topic_score_codex":0.00012188745,"about_ca_topic_score_gemma":0.00040945335,"teacher_disagreement_score":0.80522424,"about_ca_system_score_codex":0.00002180998,"about_ca_system_score_gemma":0.00006428797,"threshold_uncertainty_score":0.9411063},"labels":[],"label_agreement":null},{"id":"W2007844770","doi":"10.1107/s1744309111020914","title":"Preliminary X-ray crystallographic studies of UDP-glucose-4-epimerase from<i>Aspergillus nidulans</i>","year":2011,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan","funders":"Western Economic Diversification Canada; Saskatchewan Health Research Foundation; Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; University of Saskatchewan; Canadian Light Source","keywords":"Aspergillus nidulans; Crystallography; Crystal twinning; Protein Data Bank (RCSB PDB); Escherichia coli; Resolution (logic); X-ray crystallography; X-ray; Molecular replacement; Beamline; Chemistry; Crystal structure; Materials science; Diffraction; Stereochemistry; Biochemistry; Physics; Optics","score_opus":0.03547424435658768,"score_gpt":0.2771252776052795,"score_spread":0.2416510332486918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007844770","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9879839,0.0060684136,0.0030523466,0.00028057914,0.0007654094,0.0004530075,0.00025381852,0.00027239448,0.0008701286],"genre_scores_gemma":[0.9868481,0.004745748,0.007379808,0.00018744399,0.000106636355,0.00007388964,0.00060006225,0.000032704815,0.000025567992],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99735165,0.00057939073,0.0008780507,0.00062939466,0.0001907992,0.0003707432],"domain_scores_gemma":[0.9970933,0.0003797212,0.000618649,0.0012565951,0.000507834,0.00014390124],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003490515,0.00040428303,0.00054807856,0.00045864022,0.00087807555,0.00003863122,0.0007237557,0.000415623,0.0005106446],"category_scores_gemma":[0.0001638527,0.000348901,0.00017632931,0.0008580622,0.0019474552,0.00054660835,0.00041858671,0.00035878507,7.6973595e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023964702,0.00007282807,0.014008242,0.00004734033,0.0002433667,0.0000012013091,0.002146505,0.000022742674,0.97722226,0.0053614136,0.0001289217,0.0005055509],"study_design_scores_gemma":[0.0068290294,0.00583802,0.5595407,0.00056044856,0.0023658075,0.0003002328,0.017483247,0.0020308094,0.08211883,0.25958973,0.05900233,0.004340816],"about_ca_topic_score_codex":0.0004933671,"about_ca_topic_score_gemma":0.0005382991,"teacher_disagreement_score":0.8951034,"about_ca_system_score_codex":0.00003147218,"about_ca_system_score_gemma":0.000044298267,"threshold_uncertainty_score":0.9998963},"labels":[],"label_agreement":null},{"id":"W2008944846","doi":"10.1107/s1744309106034609","title":"Expression, purification, crystallization and preliminary X-ray analysis of two arginine-biosynthetic enzymes from<i>Mycobacterium tuberculosis</i>","year":2006,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Escherichia coli; Mycobacterium tuberculosis; Ornithine Carbamoyltransferase; Enzyme; Reductase; Arginine; Biochemistry; Molecular biology; Biosynthesis; Gene; Biology; Open reading frame; Chemistry; Ornithine; Tuberculosis; Amino acid; Peptide sequence","score_opus":0.008661127771337235,"score_gpt":0.24529706096890583,"score_spread":0.2366359331975686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008944846","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9725379,0.0021142866,0.023057792,0.0006427568,0.00027762222,0.00041256993,0.00043275303,0.00019797248,0.0003263825],"genre_scores_gemma":[0.9892607,0.0010551837,0.0057879714,0.000077420125,0.00011958354,0.0000680445,0.0035736922,0.000025855572,0.000031564825],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99746466,0.00051267893,0.00087492255,0.0006635943,0.00019821405,0.0002859611],"domain_scores_gemma":[0.9973667,0.00040137087,0.0006611526,0.001043286,0.0004229445,0.00010453635],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00028057274,0.00034956445,0.0005087021,0.0007068012,0.0007870922,0.00011999181,0.00041181216,0.00034097934,0.00032950472],"category_scores_gemma":[0.000082037746,0.00031531308,0.00014171691,0.0014163476,0.0009118499,0.00055586605,0.00024608945,0.00022488025,3.017087e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007881193,0.00004983306,0.03225371,0.000025327734,0.0001735381,1.8247334e-7,0.0002732849,0.0005717077,0.95780814,0.008516377,0.0000873904,0.00016170983],"study_design_scores_gemma":[0.0022742064,0.00054101786,0.854007,0.00013395582,0.0036405823,0.000044343076,0.0009610661,0.012295041,0.06724004,0.04066155,0.01671089,0.0014902796],"about_ca_topic_score_codex":0.0006387914,"about_ca_topic_score_gemma":0.00070914836,"teacher_disagreement_score":0.8905681,"about_ca_system_score_codex":0.00003189886,"about_ca_system_score_gemma":0.00003332239,"threshold_uncertainty_score":0.9999299},"labels":[],"label_agreement":null},{"id":"W2009224343","doi":"10.1107/s1744309108010919","title":"Purification, crystallization and X-ray diffraction analysis of a novel ring-cleaving enzyme (BoxC<sub>C</sub>) from<i>Burkholderia xenovorans</i>LB400","year":2008,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Cassava research and cyanide","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Crystallization; Ring (chemistry); Crystallography; Enzyme; Burkholderia; X-ray crystallography; Materials science; Chemistry; Diffraction; Biochemistry; Organic chemistry; Physics; Biology; Bacteria; Optics","score_opus":0.028624852678904487,"score_gpt":0.2552463727694916,"score_spread":0.2266215200905871,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009224343","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939893,0.0006206381,0.0031732135,0.0011143729,0.000079763595,0.00041525543,0.00038435298,0.00013884479,0.00008429401],"genre_scores_gemma":[0.9880066,0.0074816863,0.0006893014,0.00011157051,0.0000894532,0.00005949885,0.0035445855,0.0000061851883,0.000011130567],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977594,0.0003510652,0.00069187005,0.00060920743,0.000249076,0.00033935162],"domain_scores_gemma":[0.9978593,0.0005701737,0.00049784605,0.000426286,0.00045149148,0.0001949],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00027691544,0.00030571976,0.0004621206,0.000322655,0.0013955313,0.00009501174,0.00043907115,0.00037474447,0.00008785471],"category_scores_gemma":[0.00017019884,0.00019199093,0.00018081199,0.0024290676,0.0008526429,0.00053384906,0.00024149496,0.00034493336,1.9335319e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006880221,0.0001049328,0.02899443,0.0000088545585,0.00037257926,3.7008883e-7,0.0002804123,0.00009185764,0.96708137,0.001052496,0.000024084102,0.0019197998],"study_design_scores_gemma":[0.0005810259,0.00020503072,0.9771255,0.000023362029,0.00038592928,0.000027675334,0.0005242269,0.010894314,0.0027643288,0.000957179,0.006099435,0.0004119816],"about_ca_topic_score_codex":0.00094395113,"about_ca_topic_score_gemma":0.003736649,"teacher_disagreement_score":0.964317,"about_ca_system_score_codex":0.000043308883,"about_ca_system_score_gemma":0.000027801303,"threshold_uncertainty_score":0.9999045},"labels":[],"label_agreement":null},{"id":"W2012458606","doi":"10.1107/s1744309108042474","title":"Cloning, recombinant production, crystallization and preliminary X-ray diffraction analysis of a family 101 glycoside hydrolase from<i>Streptococcus pneumoniae</i>","year":2009,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Canadian Institutes of Health Research","keywords":"Recombinant DNA; Streptococcus pneumoniae; Cloning (programming); Crystallization; Microbiology; Glycoside hydrolase; Biology; Chemistry; Gene; Genetics; Organic chemistry","score_opus":0.012888227308708112,"score_gpt":0.2617617743957885,"score_spread":0.2488735470870804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012458606","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9906646,0.0011609932,0.005409434,0.001122335,0.0004979646,0.0005829032,0.000121287805,0.00022158331,0.00021890884],"genre_scores_gemma":[0.99367565,0.002612851,0.0017072367,0.00019156725,0.000097535296,0.0000561344,0.001598953,0.000020554,0.000039518567],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9973015,0.0005066995,0.00087839755,0.000778734,0.00021514752,0.00031952476],"domain_scores_gemma":[0.9973624,0.0002489865,0.0007949513,0.0010380495,0.0004128539,0.00014280275],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00034729065,0.00037625185,0.000558075,0.0007853577,0.0009814778,0.00011271381,0.000370828,0.00040745092,0.00008888203],"category_scores_gemma":[0.0001924709,0.00034825347,0.00015675739,0.0017266353,0.0006203089,0.00076162245,0.00016029822,0.00034791202,2.6777803e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016038006,0.000080805454,0.01939531,0.000016933025,0.00023961104,4.2710593e-7,0.0005260278,0.0008230533,0.97645324,0.00114865,0.000088503715,0.0010670441],"study_design_scores_gemma":[0.0009675492,0.0010510335,0.9601424,0.000083996245,0.0017357147,0.000027592538,0.00075675896,0.009210689,0.0036575363,0.014576551,0.0070632542,0.0007269379],"about_ca_topic_score_codex":0.00032616736,"about_ca_topic_score_gemma":0.00047989018,"teacher_disagreement_score":0.9727957,"about_ca_system_score_codex":0.000055373028,"about_ca_system_score_gemma":0.000044314365,"threshold_uncertainty_score":0.99989694},"labels":[],"label_agreement":null},{"id":"W2012927744","doi":"10.1107/s1744309106000637","title":"Cloning, expression, purification, crystallization and preliminary X-ray studies of epoxide hydrolases A and B from<i>Mycobacterium tuberculosis</i>","year":2006,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Mycobacterium tuberculosis; Escherichia coli; Crystallization; Enzyme; Recombinant DNA; Epoxide; Chemistry; Tuberculosis; Molecular biology; Biochemistry; Biology; Organic chemistry; Catalysis; Medicine","score_opus":0.01328125324746648,"score_gpt":0.2586261343500051,"score_spread":0.2453448811025386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012927744","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98678386,0.006941588,0.0044599734,0.00072816125,0.00024395436,0.00039503022,0.00016173786,0.000155607,0.00013006439],"genre_scores_gemma":[0.9874306,0.006051288,0.0053089987,0.00008982436,0.00012045544,0.00006363508,0.0008808602,0.00002374176,0.000030651936],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9978746,0.00041937662,0.00074519805,0.00057144125,0.00014804049,0.00024130294],"domain_scores_gemma":[0.997828,0.00044745137,0.0005660122,0.00067031186,0.00040031865,0.00008790315],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00025892764,0.00031547662,0.00040898134,0.0002813919,0.0009175913,0.00009544101,0.0002484078,0.00031431924,0.000054387034],"category_scores_gemma":[0.00016218977,0.0002768776,0.000056721758,0.00042485836,0.001290191,0.0006160206,0.00030974322,0.00020361043,1.3257475e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000107257925,0.000029744706,0.019450232,0.00006881577,0.00005354922,2.4442002e-7,0.0004972446,0.000066043845,0.975892,0.0035167807,0.00014026253,0.00017779843],"study_design_scores_gemma":[0.003730894,0.001482612,0.732824,0.00055102457,0.001019423,0.00025293263,0.004529116,0.0041761813,0.09682386,0.11350458,0.038988516,0.002116829],"about_ca_topic_score_codex":0.00033646,"about_ca_topic_score_gemma":0.0003323228,"teacher_disagreement_score":0.87906814,"about_ca_system_score_codex":0.000025526097,"about_ca_system_score_gemma":0.000026362355,"threshold_uncertainty_score":0.99996835},"labels":[],"label_agreement":null},{"id":"W2013272592","doi":"10.1107/s174430910703477x","title":"Cloning, expression, purification and preliminary crystallographic analysis of the short-chain dehydrogenase enzymes WbmF, WbmG and WbmH from<i>Bordetella bronchiseptica</i>","year":2007,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Cofactor; Crystallization; Dehydrogenase; Enzyme; Escherichia coli; Nucleotide; Bordetella; Bordetella bronchiseptica; Chemistry; Molecular replacement; Biochemistry; Crystallography; Stereochemistry; Substrate (aquarium); Biology; Bacteria; Gene; Organic chemistry; Genetics","score_opus":0.010870688499345431,"score_gpt":0.25636072893619577,"score_spread":0.24549004043685033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013272592","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9867252,0.004146187,0.0075932154,0.0004155339,0.00021608997,0.0004435749,0.00015535942,0.000105989704,0.00019886799],"genre_scores_gemma":[0.9945333,0.0024760212,0.002260727,0.00013971166,0.000060979393,0.000026568483,0.00046526472,0.00002120329,0.000016211516],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9976407,0.00045879447,0.0007637302,0.0006182403,0.0002017596,0.00031675168],"domain_scores_gemma":[0.99746686,0.00057389477,0.00047407002,0.0010869786,0.00024265962,0.00015553444],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005865668,0.00032156697,0.00042789252,0.0005111932,0.0011652367,0.00009015498,0.00047956963,0.00041288722,0.000096565775],"category_scores_gemma":[0.00015387323,0.0002487833,0.00014809944,0.0014992553,0.0016618355,0.00033073712,0.000422255,0.00033852522,5.688492e-8],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001274467,0.000027823773,0.06180267,0.000019917625,0.0002056309,2.5019273e-7,0.000602208,0.00005800776,0.9331829,0.0033421214,0.000030577678,0.00060045096],"study_design_scores_gemma":[0.0009671671,0.00044972694,0.9212744,0.00009100508,0.0020358954,0.00006441937,0.0016990307,0.003780445,0.047032088,0.010619682,0.011126872,0.00085925235],"about_ca_topic_score_codex":0.00023819804,"about_ca_topic_score_gemma":0.0014425607,"teacher_disagreement_score":0.88615084,"about_ca_system_score_codex":0.000022861408,"about_ca_system_score_gemma":0.000028821465,"threshold_uncertainty_score":0.9999964},"labels":[],"label_agreement":null},{"id":"W2014220515","doi":"10.1107/s1744309106024845","title":"Expression, purification, crystallization and preliminary X-ray crystallographic studies of<i>Deinococcus radiodurans</i>thioredoxin reductase","year":2006,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Redox biology and oxidative stress","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Center for Research Resources","keywords":"Deinococcus radiodurans; Escherichia coli; Thioredoxin; Thioredoxin reductase; Fumarate reductase; Oxidoreductase; Molecular replacement; Crystallography; Chemistry; Biochemistry; Reductase; Geobacillus stearothermophilus; Enzyme; DNA; Thermophile","score_opus":0.013698131813278626,"score_gpt":0.27900905005155896,"score_spread":0.26531091823828035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014220515","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97412294,0.014949062,0.008573286,0.0009104568,0.00021484088,0.0007307881,0.00018608363,0.000089751054,0.00022280638],"genre_scores_gemma":[0.9799546,0.012319814,0.0041653155,0.000088029214,0.00016214658,0.00013523774,0.0030572675,0.00003351498,0.00008407083],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9972742,0.0006789276,0.0008242289,0.0007521467,0.00013305373,0.00033743423],"domain_scores_gemma":[0.9974891,0.00016826334,0.0005805077,0.0010410995,0.0006115684,0.00010949242],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00036493165,0.00041781308,0.00043514953,0.0003947687,0.0009347183,0.000045664587,0.00047619338,0.00056786113,0.000016299544],"category_scores_gemma":[0.00021611011,0.00037910932,0.00013329825,0.00064101885,0.0025654149,0.000073686715,0.00036202735,0.00027557986,7.446194e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020726936,0.000073776704,0.03002263,0.00007825602,0.00018384581,4.92783e-7,0.00018435714,0.0001142584,0.9645241,0.003924702,0.00040123577,0.00028511396],"study_design_scores_gemma":[0.00661317,0.0038677626,0.66405547,0.00044014683,0.0008712212,0.0004910732,0.00561676,0.001020662,0.10774016,0.050379504,0.15556939,0.0033347073],"about_ca_topic_score_codex":0.00005027109,"about_ca_topic_score_gemma":0.00013578616,"teacher_disagreement_score":0.8567839,"about_ca_system_score_codex":0.000016534956,"about_ca_system_score_gemma":0.000055346944,"threshold_uncertainty_score":0.99986607},"labels":[],"label_agreement":null},{"id":"W2016740325","doi":"10.1107/s1744309111055400","title":"Structure of a pectin methylesterase from<i>Yersinia enterocolitica</i>","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Botanical Research and Chemistry","field":"Agricultural and Biological Sciences","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada; Michael Smith Health Research BC","keywords":"Yersinia enterocolitica; Pectin; Yersinia; Chemistry; Microbiology; Enzyme; Pectinesterase; Biochemistry; Pectinase; Biology; Bacteria; Genetics","score_opus":0.018925054067689257,"score_gpt":0.27519044106797336,"score_spread":0.2562653870002841,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016740325","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99697584,0.000851015,0.000069970345,0.00101738,0.000091485075,0.00020311913,0.00044884867,0.00006344252,0.00027887174],"genre_scores_gemma":[0.9975209,0.0004937847,0.0006019667,0.00013016943,0.00016798865,0.00001392291,0.0010566259,0.0000023056646,0.00001233583],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99864936,0.00027928967,0.00035688002,0.00024492037,0.00013006921,0.00033945846],"domain_scores_gemma":[0.998602,0.0005518049,0.00018935029,0.00026923598,0.00015889887,0.00022875781],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001200183,0.00017979614,0.00022797994,0.000032800905,0.00043155195,0.00003713377,0.00043298642,0.00027386376,0.00055597123],"category_scores_gemma":[0.00014412258,0.00009187203,0.00009579149,0.0004658292,0.0004955325,0.00026197254,0.0002607026,0.00031128014,2.0619096e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038232505,0.00004489565,0.06485403,0.000007636492,0.000051264517,5.9564986e-8,0.00009650297,2.2633205e-7,0.931415,0.0011960041,0.00003507273,0.0022610456],"study_design_scores_gemma":[0.00084156805,0.00043399158,0.87251216,0.00006122577,0.00015184973,0.00005153624,0.0018283073,0.00017599217,0.024474958,0.020014092,0.07871839,0.00073591055],"about_ca_topic_score_codex":0.0002812908,"about_ca_topic_score_gemma":0.0006609547,"teacher_disagreement_score":0.90694004,"about_ca_system_score_codex":0.000019972555,"about_ca_system_score_gemma":0.000009745734,"threshold_uncertainty_score":0.6087495},"labels":[],"label_agreement":null},{"id":"W2017251647","doi":"10.1107/s1744309113004004","title":"Crystallization and preliminary crystallographic analysis of the first condensation domain of viomycin synthetase","year":2013,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Microbial Natural Products and Biosynthesis","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Viomycin; Nonribosomal peptide; Chemistry; Stereochemistry; Peptide; Crystallography; Supramolecular chemistry; Monomer; Biosynthesis; Biochemistry; Enzyme; Crystal structure; Organic chemistry","score_opus":0.010812047204727613,"score_gpt":0.24674760555576217,"score_spread":0.23593555835103455,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017251647","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99210674,0.0009212477,0.0007968365,0.0047935564,0.000078589335,0.0010138397,0.00010621059,0.00005072407,0.00013224843],"genre_scores_gemma":[0.996515,0.0014198722,0.0013604219,0.00020457279,0.000023344224,0.000019630395,0.00041727707,0.000016864302,0.000023048253],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981977,0.00028663792,0.0007490161,0.00039627976,0.00016600531,0.00020439185],"domain_scores_gemma":[0.99743825,0.00027317432,0.0006392925,0.00096960645,0.00058742147,0.0000922313],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002608766,0.000255347,0.0005366187,0.0008051559,0.00053747697,0.000034739645,0.00030517337,0.00033455048,0.00016126869],"category_scores_gemma":[0.00019008094,0.00018044772,0.00023846033,0.0024341685,0.0014573875,0.00025663094,0.00028010024,0.00026348222,5.4398136e-8],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000110616296,0.00008863787,0.10522419,0.00015550201,0.0009807723,1.2867491e-7,0.00039354415,0.000033979017,0.8882732,0.0042155334,0.000056609675,0.00046729445],"study_design_scores_gemma":[0.0008829938,0.00042382564,0.97939175,0.00014228167,0.0022379754,0.00006702124,0.0006580748,0.003133501,0.0027200484,0.0055279443,0.0044710007,0.00034359383],"about_ca_topic_score_codex":0.00029878345,"about_ca_topic_score_gemma":0.00038919016,"teacher_disagreement_score":0.8855531,"about_ca_system_score_codex":0.000024393994,"about_ca_system_score_gemma":0.000040101146,"threshold_uncertainty_score":0.73584443},"labels":[],"label_agreement":null},{"id":"W2018599561","doi":"10.1107/s1744309109055158","title":"Apo and ligand-bound structures of ModA from the archaeon<i>Methanosarcina acetivorans</i>","year":2010,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Toronto; U.S. Department of Energy","keywords":"Periplasmic space; ATP-binding cassette transporter; Crystallography; Ligand (biochemistry); Stereochemistry; Chemistry; Protein structure; Biophysics; Biochemistry; Biology; Transporter; Escherichia coli; Receptor","score_opus":0.01278463253039696,"score_gpt":0.25936957615277345,"score_spread":0.24658494362237648,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018599561","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99354845,0.00088976073,0.0020105096,0.002113747,0.0005821872,0.00030781468,0.00021118279,0.00008585823,0.000250493],"genre_scores_gemma":[0.9951025,0.00095435366,0.0031524007,0.00023273789,0.000159502,0.000026322372,0.00034122443,0.000016633192,0.000014319898],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99851036,0.00031289554,0.00042496153,0.00039433586,0.00013394521,0.00022351704],"domain_scores_gemma":[0.99789435,0.00057712744,0.00031376982,0.000920557,0.00020763696,0.00008657692],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027517622,0.00024029592,0.00027083018,0.00013469145,0.0009837531,0.00009067681,0.0005591091,0.0003333901,0.00019380193],"category_scores_gemma":[0.00014442025,0.00016981247,0.000069053545,0.00039670125,0.0020991606,0.00029535772,0.00032214008,0.0005191424,1.4356752e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050204337,0.000009093415,0.015790107,0.000011377829,0.00003993002,9.295163e-8,0.000716966,0.00000569829,0.96394026,0.018659037,0.000060639748,0.00071657164],"study_design_scores_gemma":[0.0018645341,0.00046261368,0.5145674,0.000050989987,0.00036280425,0.00016537774,0.001851433,0.0008946865,0.059655786,0.36283317,0.056337107,0.00095410954],"about_ca_topic_score_codex":0.0007171156,"about_ca_topic_score_gemma":0.0028711644,"teacher_disagreement_score":0.9042845,"about_ca_system_score_codex":0.000007708513,"about_ca_system_score_gemma":0.00003640723,"threshold_uncertainty_score":0.7734445},"labels":[],"label_agreement":null},{"id":"W2018767957","doi":"10.1107/s1744309107025286","title":"Crystallization and preliminary X-ray analysis of phage Mu activator protein C in a complex with promoter DNA","year":2007,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; University of Toronto","funders":"University of Toronto; Industrial Macromolecular Crystallography Association Collaborative Access Team; National Science Foundation","keywords":"Crystallization; DNA; X-ray; Activator (genetics); Crystallography; Molecular biology; Materials science; Chemistry; Biology; Physics; Genetics; Gene; Optics","score_opus":0.013574635087051722,"score_gpt":0.2642855815792736,"score_spread":0.2507109464922219,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018767957","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96445256,0.00027059772,0.034119945,0.00024240487,0.000014559591,0.0006866432,0.000045520403,0.000026674847,0.00014109285],"genre_scores_gemma":[0.99238217,0.00032619905,0.005956446,0.000061877756,0.00002384936,0.00006605611,0.0011354282,0.000019978008,0.000028000666],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99849755,0.00027866097,0.00046161562,0.0004221685,0.00010460478,0.00023540079],"domain_scores_gemma":[0.99872977,0.00007135769,0.0003243491,0.0006137747,0.0001762491,0.00008452896],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004001057,0.00022930633,0.00030846344,0.0005669489,0.0002737171,0.000029073646,0.00026033644,0.00031477463,0.000031662945],"category_scores_gemma":[0.000069109235,0.00020074236,0.000071298775,0.0010561737,0.0005000495,0.000039005547,0.00017871113,0.00014135742,2.0097984e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036599868,0.000059246562,0.023495885,0.0000308694,0.00033982965,4.869321e-7,0.00019688203,0.000041067662,0.9736648,0.0011228108,0.0000038214866,0.00067830924],"study_design_scores_gemma":[0.0025100498,0.0026621968,0.91425645,0.00010903938,0.00076459267,0.000060777995,0.0012775849,0.0028106042,0.057920113,0.0025304568,0.014026647,0.0010714676],"about_ca_topic_score_codex":0.0000580026,"about_ca_topic_score_gemma":0.00091674353,"teacher_disagreement_score":0.91574466,"about_ca_system_score_codex":0.000014772629,"about_ca_system_score_gemma":0.00003093575,"threshold_uncertainty_score":0.8186036},"labels":[],"label_agreement":null},{"id":"W2020307126","doi":"10.1107/s1744309111038413","title":"Expression, purification and preliminary crystallographic analysis of Rv2247, the β subunit of acyl-CoA carboxylase (ACCD6) from <i>Mycobacterium tuberculosis</i>","year":2011,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Mycobacterium tuberculosis; Pyruvate carboxylase; Acetyl-CoA carboxylase; Protein subunit; Biosynthesis; Chemistry; Biochemistry; Biology; Tuberculosis; Crystallography; Microbiology; Enzyme; Gene; Medicine","score_opus":0.029337032127042313,"score_gpt":0.29236763662555165,"score_spread":0.26303060449850935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020307126","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934808,0.0024036127,0.0009776192,0.0017835287,0.0000777478,0.0006024945,0.0002732945,0.00006537509,0.00033551324],"genre_scores_gemma":[0.98608744,0.009975019,0.0017909602,0.0002109568,0.000034917648,0.000093235554,0.0017787014,0.00002018138,0.000008614418],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9972357,0.0008846173,0.00092084636,0.0004844139,0.00017498666,0.00029942128],"domain_scores_gemma":[0.996451,0.0007757542,0.0005974158,0.0014463802,0.00054120837,0.00018821863],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049569935,0.0002854697,0.00070366455,0.00092483644,0.00046382548,0.000018057364,0.00045243514,0.0004214032,0.00015436651],"category_scores_gemma":[0.000345924,0.00020785008,0.00026475347,0.001926393,0.0019679281,0.00023822437,0.0003587432,0.0004592983,6.8321036e-8],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004896583,0.00012668663,0.35259724,0.000059032955,0.0016042144,4.8400506e-7,0.001071827,0.00000952293,0.6419478,0.0016256713,0.000050818475,0.00041705612],"study_design_scores_gemma":[0.00068355177,0.0005561733,0.98639524,0.00005381437,0.0020443082,0.000031918546,0.0009897448,0.002027425,0.0021022402,0.0028497758,0.0020407971,0.00022498288],"about_ca_topic_score_codex":0.0013364983,"about_ca_topic_score_gemma":0.0006457766,"teacher_disagreement_score":0.63984555,"about_ca_system_score_codex":0.000018714778,"about_ca_system_score_gemma":0.00005419319,"threshold_uncertainty_score":0.847588},"labels":[],"label_agreement":null},{"id":"W2021884419","doi":"10.1107/s1744309105010997","title":"Crystallization and preliminary X-ray analysis of (1<i>R</i>,6<i>R</i>)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) synthase (MenD) from<i>Escherichia coli</i>","year":2005,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Biochemical Acid Research Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Center for Research Resources","keywords":"Carboxylate; Crystallization; Enzyme; Cofactor; Crystallography; Chemistry; Stereochemistry; Ethylene glycol; Adduct; Organic chemistry","score_opus":0.010349849869108422,"score_gpt":0.26692731385553664,"score_spread":0.2565774639864282,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021884419","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98827505,0.0043982975,0.004784336,0.0012689867,0.000069439506,0.00045643988,0.00038865668,0.00006624043,0.00029256468],"genre_scores_gemma":[0.9811773,0.011004448,0.0041392115,0.00028893718,0.00011379834,0.000082005026,0.00312413,0.000030625317,0.000039553015],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99761546,0.00041562878,0.0006847695,0.0007241853,0.0001825607,0.0003773727],"domain_scores_gemma":[0.99779296,0.0002042838,0.00040907657,0.0010318336,0.00036334066,0.00019850198],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00027171732,0.00038030732,0.0005071566,0.00043718703,0.000614286,0.000056816956,0.00051924074,0.0004928336,0.00005469594],"category_scores_gemma":[0.00022252003,0.00036031884,0.0001891673,0.0012434638,0.0012388711,0.000058850863,0.0007167387,0.00031809442,1.3236205e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002470532,0.00008988102,0.016257608,0.000027525364,0.0013883436,2.5033253e-7,0.00022384632,0.00033189973,0.98028934,0.00040802418,0.00010358555,0.00063264597],"study_design_scores_gemma":[0.006588326,0.004053612,0.61682117,0.0001985381,0.0063025746,0.00003575672,0.0020819753,0.052767243,0.07892548,0.0051195873,0.22336836,0.0037373835],"about_ca_topic_score_codex":0.00017253199,"about_ca_topic_score_gemma":0.00067951286,"teacher_disagreement_score":0.90136385,"about_ca_system_score_codex":0.000028739018,"about_ca_system_score_gemma":0.00004760851,"threshold_uncertainty_score":0.9998849},"labels":[],"label_agreement":null},{"id":"W2022175846","doi":"10.1107/s1744309106025012","title":"The molecular structure of Rv2074, a probable pyridoxine 5′-phosphate oxidase from<i>Mycobacterium tuberculosis</i>, at 1.6 Å resolution","year":2006,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Alberta Heritage Foundation for Medical Research; Fondation pour la Recherche Médicale; U.S. Department of Energy; National Institutes of Health; National Science Foundation","keywords":"Chemistry; Crystallography; Flavin mononucleotide; Stereochemistry; Pyrophosphate; Crystal structure; Molecule; Flavin group; Biochemistry; Enzyme","score_opus":0.006076877014448106,"score_gpt":0.22365921457028315,"score_spread":0.21758233755583503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022175846","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916841,0.003053214,0.002104294,0.0013758615,0.0005116201,0.00044859407,0.00034859864,0.00015041913,0.00032330604],"genre_scores_gemma":[0.99522907,0.0008715601,0.0019145668,0.00010460934,0.000103571285,0.00003569366,0.0016560572,0.000024790386,0.00006007197],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978674,0.0004294469,0.00068157964,0.00046923253,0.00019638364,0.00035593563],"domain_scores_gemma":[0.99774086,0.00025817766,0.0005349349,0.0010885817,0.00029832718,0.00007911475],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00020242858,0.0003031715,0.00029734973,0.00014989193,0.0015695825,0.00011005236,0.00052834506,0.00034889713,0.00018028916],"category_scores_gemma":[0.00007009716,0.00022582126,0.00011504698,0.00061572733,0.0010539242,0.0003368723,0.0003656315,0.00027249934,5.2094464e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012166375,0.000017354345,0.0051225224,0.000018042218,0.000047021516,2.97375e-7,0.00007158479,0.00022943821,0.97742355,0.01660324,0.00024912166,0.00009616531],"study_design_scores_gemma":[0.0033668138,0.0007355007,0.21102585,0.00014016514,0.00068241055,0.00020308344,0.00046666246,0.0038572105,0.35069174,0.2379304,0.18911134,0.0017888364],"about_ca_topic_score_codex":0.00079193764,"about_ca_topic_score_gemma":0.0038091023,"teacher_disagreement_score":0.6267318,"about_ca_system_score_codex":0.00007213719,"about_ca_system_score_gemma":0.000037469996,"threshold_uncertainty_score":0.9997302},"labels":[],"label_agreement":null},{"id":"W2022685937","doi":"10.1107/s1744309112010226","title":"Structure of a hexameric form of RadA recombinase from<i>Methanococcus voltae</i>","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Saskatchewan Health Research Foundation","keywords":"Recombinase; RAD51; Methanococcus; DNA; Pyrococcus furiosus; Homologous recombination; Biology; DNA repair; Cell biology; Genetics; Biophysics; Gene; Escherichia coli; Recombination; Archaea","score_opus":0.010606404143011575,"score_gpt":0.2575789645549972,"score_spread":0.24697256041198562,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022685937","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931838,0.0017487454,0.0039312067,0.00010295505,0.00027330738,0.0002972689,0.00029211727,0.00003057124,0.00014006473],"genre_scores_gemma":[0.9908067,0.0013277426,0.0058416203,0.000076063916,0.00008268204,0.00001649798,0.0018103241,0.00002158215,0.000016782335],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998643,0.00027327207,0.00047990363,0.00027024804,0.000091718946,0.00024188252],"domain_scores_gemma":[0.99819285,0.00008588278,0.00046266595,0.0009329943,0.00022078159,0.00010485718],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014204194,0.0002161606,0.00028823694,0.0001677893,0.00020082056,0.000009536533,0.00041231446,0.0003624054,0.000072503986],"category_scores_gemma":[0.00011545985,0.00020278459,0.00012007633,0.00042625336,0.0005384728,0.000039752507,0.00031768475,0.00017418827,5.461532e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006638957,0.000048216323,0.04059164,0.000021287733,0.00014590133,2.7758784e-8,0.00021400378,0.0000033998447,0.9563078,0.001607546,0.000049610102,0.0009441708],"study_design_scores_gemma":[0.004416116,0.002443,0.18246937,0.00012750886,0.0006726966,0.00016363918,0.002381355,0.0008174521,0.65365404,0.05755472,0.093396075,0.0019040297],"about_ca_topic_score_codex":0.00018053208,"about_ca_topic_score_gemma":0.0002181538,"teacher_disagreement_score":0.30265376,"about_ca_system_score_codex":0.000011597364,"about_ca_system_score_gemma":0.000036596834,"threshold_uncertainty_score":0.82693154},"labels":[],"label_agreement":null},{"id":"W2024940370","doi":"10.1107/s1744309113005678","title":"Structure of a filament of stacked octamers of human DMC1 recombinase","year":2013,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Research Council Canada; Western Economic Diversification Canada; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; University of Saskatchewan; Canadian Light Source","keywords":"RAD51; Recombinase; Homologous recombination; Histone octamer; DNA; Protein filament; Homologous chromosome; Biology; Cohesin; Biophysics; Branch migration; Cell biology; Molecular biology; Holliday junction; Genetics; Recombination; Nucleosome; Gene; Chromatin","score_opus":0.01029076616793595,"score_gpt":0.2630961424429546,"score_spread":0.25280537627501865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024940370","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982128,0.00028708266,0.0005828787,0.0001279726,0.000073921445,0.00041834236,0.00012760557,0.000017388418,0.00015199107],"genre_scores_gemma":[0.99615,0.0004306194,0.0023707715,0.00004081249,0.000015924985,0.000020640977,0.0009345822,0.000015426238,0.000021189848],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99868596,0.00024260278,0.0005688798,0.00025951897,0.0000902776,0.00015274707],"domain_scores_gemma":[0.9980626,0.000043317577,0.00056555716,0.00084988226,0.0004170478,0.00006157716],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000096553355,0.00017577845,0.0002824117,0.00020148582,0.00016233519,0.000008624433,0.00039699563,0.00028912086,0.00013568767],"category_scores_gemma":[0.000067563866,0.00016473046,0.00011132115,0.0003265932,0.0007466493,0.000022521528,0.00026088985,0.00013081022,3.006164e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028485894,0.000045085457,0.0101784,0.000051371993,0.00013560745,2.2408704e-8,0.00012769496,0.000012096375,0.9855586,0.003542809,0.000056379235,0.0002634116],"study_design_scores_gemma":[0.002987437,0.0039129625,0.10845368,0.00013392394,0.00027414496,0.00005034505,0.002614503,0.00065200735,0.82686156,0.04709043,0.006030505,0.0009384875],"about_ca_topic_score_codex":0.00018164024,"about_ca_topic_score_gemma":0.00016546142,"teacher_disagreement_score":0.15869707,"about_ca_system_score_codex":0.000008617352,"about_ca_system_score_gemma":0.00003472846,"threshold_uncertainty_score":0.6717513},"labels":[],"label_agreement":null},{"id":"W2027468707","doi":"10.1107/s1744309111001874","title":"Structural analysis of a putative family 32 carbohydrate-binding module from the<i>Streptococcus pneumoniae</i>enzyme EndoD","year":2011,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Carbohydrate Chemistry and Synthesis","field":"Chemistry","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Canadian Institutes of Health Research","keywords":"Streptococcus pneumoniae; Biochemistry; Hydrolase; Glycoside hydrolase; Biology; Enzyme; Context (archaeology); Carbohydrate; Microbiology","score_opus":0.030671565752562028,"score_gpt":0.2576928943506505,"score_spread":0.2270213285980885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027468707","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994949,0.00055066607,0.00024207111,0.00025299343,0.00009791384,0.00018712213,0.0015917685,0.00013673786,0.0019917507],"genre_scores_gemma":[0.99566865,0.00059566397,0.00031968977,0.000057534155,0.000057641028,0.00008609244,0.0031512391,0.000025765887,0.00003775292],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9979141,0.00026531055,0.0007570425,0.0005671472,0.00016734986,0.00032910184],"domain_scores_gemma":[0.9969168,0.0006729183,0.00063877774,0.0013658274,0.00028212872,0.00012356103],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00016136916,0.0003798914,0.00055061554,0.00028855697,0.000859083,0.000062572515,0.0009093125,0.00040818143,0.00045497526],"category_scores_gemma":[0.00012711009,0.00030975652,0.0003300974,0.0015611427,0.001136555,0.00027024432,0.00034598395,0.00047764197,1.7377914e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049232076,0.000027773698,0.069884256,0.000015929736,0.0016178105,7.01381e-7,0.0025904267,0.00007723278,0.9248587,0.0006205294,0.0000076269666,0.00024976564],"study_design_scores_gemma":[0.0038844633,0.0003720678,0.64287263,0.00022417521,0.013196422,0.0000567673,0.023534343,0.06992021,0.19821583,0.029233387,0.014417198,0.0040725134],"about_ca_topic_score_codex":0.00097029074,"about_ca_topic_score_gemma":0.0008722599,"teacher_disagreement_score":0.7266429,"about_ca_system_score_codex":0.0000500226,"about_ca_system_score_gemma":0.000048075723,"threshold_uncertainty_score":0.99993545},"labels":[],"label_agreement":null},{"id":"W2028438582","doi":"10.1107/s1744309112033155","title":"Crystallization and preliminary X-ray characterization of the<i>Vitis vinifera</i>fucokinase:GDP-fucose pyrophosphorylase","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Kimberly-Clark (Canada)","funders":"","keywords":"Fucose; Tetragonal crystal system; Monomer; Crystallization; Crystallography; Enzyme; Chemistry; Solvent; Biochemistry; Crystal structure; Galactose; Polymer; Organic chemistry","score_opus":0.011072645417708572,"score_gpt":0.2618105304234859,"score_spread":0.2507378850057773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028438582","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99183816,0.0011170339,0.00503502,0.0007942389,0.00021103429,0.00065980176,0.00014487452,0.000035373847,0.00016447189],"genre_scores_gemma":[0.9939167,0.0033791799,0.0006719179,0.00018196253,0.000115980816,0.000079159974,0.001471465,0.00002751899,0.00015614429],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982929,0.0004525621,0.0004528558,0.00033863552,0.0001584088,0.00030461114],"domain_scores_gemma":[0.9983206,0.000056953006,0.00033296138,0.00084256084,0.0003007913,0.00014612882],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002918426,0.00024239991,0.00020542215,0.00018450181,0.0007297217,0.000047202648,0.00037463123,0.00034906733,0.000049772818],"category_scores_gemma":[0.00017137428,0.00020552849,0.000091079695,0.0005452829,0.0007913125,0.00007942579,0.000490377,0.00023538589,1.7955452e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010774563,0.0000641022,0.052572317,0.000039065068,0.00006103579,7.547911e-8,0.00019096972,0.000012939878,0.94403803,0.0017270878,0.000048677644,0.001137928],"study_design_scores_gemma":[0.0012804492,0.0006144231,0.8614722,0.000060650007,0.000104603714,0.00010320147,0.00029778297,0.0010516659,0.024125692,0.00077191717,0.10954114,0.0005762704],"about_ca_topic_score_codex":0.0000438523,"about_ca_topic_score_gemma":0.00007301783,"teacher_disagreement_score":0.91991234,"about_ca_system_score_codex":0.00001846992,"about_ca_system_score_gemma":0.00005161354,"threshold_uncertainty_score":0.8381209},"labels":[],"label_agreement":null},{"id":"W2029515181","doi":"10.1107/s1744309110001375","title":"Purification and crystallization of a multimodular heterotrimeric complex containing both type I and type II cohesin–dockerin interactions from the cellulosome of<i>Clostridium thermocellum</i>","year":2010,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Biofuel production and bioconversion","field":"Engineering","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research","keywords":"Cellulosome; Clostridium thermocellum; Cohesin; Heterotrimeric G protein; Protein subunit; Cellulase; Chemistry; Biochemistry; Cell biology; Crystallography; Biology; DNA; G protein; Enzyme; Chromatin; Gene; Signal transduction","score_opus":0.019325095642678317,"score_gpt":0.2467953475045931,"score_spread":0.22747025186191477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029515181","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99574816,0.0010382397,0.0013571545,0.0007508324,0.00039863572,0.00039805568,0.00007881787,0.000113569586,0.000116525705],"genre_scores_gemma":[0.99407464,0.0031607852,0.0018902365,0.000049368344,0.000054702687,0.00001196711,0.0007281561,0.00002109461,0.000009052347],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988882,0.00016803386,0.0004479609,0.00026774724,0.00008435197,0.00014371616],"domain_scores_gemma":[0.9986206,0.00019431738,0.0002603702,0.0005562378,0.00030172095,0.000066717694],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001601471,0.00020530536,0.00024203178,0.0001718832,0.0005435258,0.000037549984,0.00024350373,0.00022269553,0.00009626403],"category_scores_gemma":[0.00008060163,0.00017290007,0.000036147478,0.0006187413,0.0008017973,0.00024156728,0.00016854529,0.00037062273,1.00447465e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057281904,0.000024852305,0.006855348,0.00004250728,0.00009167969,4.4672806e-8,0.00051301013,0.000040089482,0.99074745,0.0006900061,0.00005575671,0.0008819982],"study_design_scores_gemma":[0.004528521,0.0021373963,0.5363186,0.00023936894,0.00088676414,0.00022480683,0.0047067804,0.12662068,0.08058209,0.010448756,0.23108672,0.0022195075],"about_ca_topic_score_codex":0.00017304302,"about_ca_topic_score_gemma":0.00015390424,"teacher_disagreement_score":0.9101653,"about_ca_system_score_codex":0.000012515745,"about_ca_system_score_gemma":0.000021678848,"threshold_uncertainty_score":0.705066},"labels":[],"label_agreement":null},{"id":"W2031023671","doi":"10.1107/s1744309107007580","title":"The structure of<i>Plasmodium vivax</i>phosphatidylethanolamine-binding protein suggests a functional motif containing a left-handed helix","year":2007,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences","keywords":"Motif (music); Crystallography; Structural motif; Helix (gastropod); Plasmodium vivax; Left handed; Stereochemistry; Biology; Chemistry; Biophysics; Physics; Biochemistry; Malaria; Plasmodium falciparum; Zoology; Optics; Immunology","score_opus":0.011123100275371153,"score_gpt":0.24936740460830642,"score_spread":0.23824430433293525,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031023671","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9829717,0.0007661415,0.014663442,0.00043776236,0.00024753422,0.0005951619,0.0000704579,0.0000448731,0.00020291128],"genre_scores_gemma":[0.99665123,0.00047097463,0.0018497433,0.0000650711,0.00011135991,0.00002023173,0.0006599203,0.000026290078,0.00014520562],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99826795,0.00029137154,0.0005475957,0.00039149856,0.00015316386,0.00034843938],"domain_scores_gemma":[0.9981813,0.00019831199,0.00042955778,0.00077944796,0.00031237578,0.000099016055],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004929586,0.0002702332,0.00022770924,0.00016524756,0.0012576618,0.000063021,0.0004837994,0.00042776487,0.000027730426],"category_scores_gemma":[0.00021715631,0.00021555116,0.000116981995,0.0002870822,0.00065946154,0.000025950014,0.00027246829,0.00025906524,9.663129e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002726632,0.000013385433,0.0036124962,0.000016199096,0.00013372184,2.0093584e-7,0.00009297832,0.000007827426,0.98948795,0.0051220516,0.00001577529,0.0012247341],"study_design_scores_gemma":[0.0018895997,0.0012228601,0.024079932,0.00009756148,0.00013047381,0.00021428891,0.0013832975,0.00021703249,0.9079458,0.011460008,0.050460737,0.00089836837],"about_ca_topic_score_codex":0.000027886786,"about_ca_topic_score_gemma":0.0006845344,"teacher_disagreement_score":0.08154213,"about_ca_system_score_codex":0.000019365747,"about_ca_system_score_gemma":0.00006586233,"threshold_uncertainty_score":0.96730447},"labels":[],"label_agreement":null},{"id":"W2031229676","doi":"10.1107/s1744309111017611","title":"Expression, purification and preliminary crystallographic analysis of<i>O</i>-acetylhomoserine sulfhydrylase from<i>Mycobacterium tuberculosis</i>","year":2011,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Biochemical and Molecular Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Mycobacterium tuberculosis; Escherichia coli; Open reading frame; Methionine; Chemistry; Resolution (logic); Enzyme; Amino acid; Biochemistry; Biosynthesis; Tuberculosis; Gene; Peptide sequence; Medicine","score_opus":0.01531262166885717,"score_gpt":0.2598517565061113,"score_spread":0.24453913483725415,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031229676","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932235,0.0023911882,0.003229865,0.0002316745,0.00007517508,0.00032614078,0.00022396422,0.000043843324,0.00025463523],"genre_scores_gemma":[0.9865006,0.0067094876,0.0027164838,0.00010978059,0.000038656053,0.000078201454,0.0038006546,0.000022025306,0.00002408143],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982289,0.00032965542,0.0004882525,0.0005851916,0.000117150026,0.00025083448],"domain_scores_gemma":[0.9981872,0.00006259247,0.00026735396,0.0010420872,0.00027600204,0.00016478401],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00018434724,0.00026463516,0.00033081003,0.00041348662,0.0003477048,0.000030348843,0.0004194659,0.00042533394,0.0000718182],"category_scores_gemma":[0.000090449845,0.0002456595,0.00017281709,0.0009717609,0.0009817537,0.00003545894,0.0005302566,0.00022602525,6.320225e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023670291,0.00007594685,0.04427893,0.000022840279,0.000667288,2.8602426e-7,0.00017656898,0.0000033318418,0.9535936,0.000505767,0.000039024995,0.00039968066],"study_design_scores_gemma":[0.0017887868,0.00146827,0.80160195,0.00006616278,0.0019365842,0.00005116865,0.00065948983,0.0012323193,0.15794024,0.004632293,0.027423505,0.001199261],"about_ca_topic_score_codex":0.0002119635,"about_ca_topic_score_gemma":0.00021527824,"teacher_disagreement_score":0.7956534,"about_ca_system_score_codex":0.000007160072,"about_ca_system_score_gemma":0.000027773736,"threshold_uncertainty_score":0.9999996},"labels":[],"label_agreement":null},{"id":"W2033057051","doi":"10.1107/s1744309113010841","title":"Triosephosphate isomerase is a common crystallization contaminant of soluble His-tagged proteins produced in<i>Escherichia coli</i>","year":2013,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Erythrocyte Function and Pathophysiology","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université du Québec","funders":"Division of Materials Research; National Center for Research Resources; National Institute of General Medical Sciences; Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Oulun Yliopisto; Exploratory Research for Advanced Technology; National Institutes of Health; National Science Foundation","keywords":"Triosephosphate isomerase; Isomerase; Escherichia coli; Chemistry; Crystallization; Biochemistry; Chromatography; Biology; Enzyme; Organic chemistry","score_opus":0.01592137369062163,"score_gpt":0.26535423642093603,"score_spread":0.2494328627303144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033057051","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912839,0.000888021,0.0012197911,0.0036768327,0.00024020945,0.0021379737,0.000040793864,0.00013685772,0.0003756347],"genre_scores_gemma":[0.99292666,0.0026140786,0.0018927654,0.0010620411,0.000053007272,0.00035232323,0.00090793165,0.000035004192,0.00015621867],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9975543,0.0004304615,0.0009497549,0.00053431524,0.00015779145,0.00037336542],"domain_scores_gemma":[0.99755734,0.00016783726,0.00054563314,0.0009982648,0.00056193327,0.00016898087],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002348377,0.00034570502,0.00065621675,0.0005187247,0.00044093883,0.000039430444,0.0002890057,0.00046661013,0.0004403219],"category_scores_gemma":[0.00013577283,0.00031265037,0.00014559671,0.0011534976,0.0007182031,0.00040461024,0.00017807048,0.00051138987,0.0000012362843],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002908349,0.00021802245,0.06166983,0.00014942439,0.000107555425,8.131529e-7,0.00079294125,0.0000134804,0.9345724,0.0012899586,0.00021785007,0.0006768882],"study_design_scores_gemma":[0.014686838,0.0043093045,0.84717864,0.00057079,0.0005738319,0.0002357973,0.002878223,0.016650872,0.026091738,0.0140614305,0.07095942,0.0018031363],"about_ca_topic_score_codex":0.00070358365,"about_ca_topic_score_gemma":0.00038695463,"teacher_disagreement_score":0.90848064,"about_ca_system_score_codex":0.00007134084,"about_ca_system_score_gemma":0.00012658352,"threshold_uncertainty_score":0.9999326},"labels":[],"label_agreement":null},{"id":"W2033886433","doi":"10.1107/s1744309112005866","title":"Structure of the third catalytic domain of the protein disulfide isomerase ERp46","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université du Québec","funders":"Canadian Institutes of Health Research; National Center for Research Resources; National Institute of General Medical Sciences; U.S. Public Health Service","keywords":"Protein disulfide-isomerase; Isomerase; Chemistry; Residue (chemistry); Molecule; Isomerization; Protein folding; Helix (gastropod); Foldase; Crystallography; Stereochemistry; Protein structure; Thioredoxin; Endoplasmic reticulum; Catalysis; Biochemistry; Enzyme; Biology; Organic chemistry","score_opus":0.006732976186819028,"score_gpt":0.2437933964922563,"score_spread":0.23706042030543725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033886433","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99684334,0.00121983,0.0002601212,0.0006431298,0.00016548342,0.00043085904,0.00022565981,0.000009706908,0.0002018817],"genre_scores_gemma":[0.9989578,0.000290942,0.00030363092,0.000092258866,0.00005608411,0.000021023927,0.00023404219,0.000011443354,0.000032750042],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99884576,0.00033163436,0.00034743318,0.00018361215,0.00010287227,0.00018867079],"domain_scores_gemma":[0.99829805,0.00003887001,0.00036522833,0.0010912587,0.00013705708,0.00006952814],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009602184,0.00016368962,0.00015961113,0.000055564797,0.00043059367,0.0000113646765,0.00058037986,0.00020894616,0.000018460498],"category_scores_gemma":[0.00012164108,0.000099460434,0.00014632942,0.00033299954,0.0010339216,0.000020925765,0.00046031765,0.00018077414,2.5633723e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030415473,0.000031657823,0.11182416,0.000029272733,0.00006539511,1.0467826e-8,0.00012962814,0.000016428394,0.8833944,0.0043614465,0.000049053262,0.000068082896],"study_design_scores_gemma":[0.0018536656,0.00027553897,0.78679353,0.00014956878,0.00031690445,0.000095942385,0.0013366416,0.00015426574,0.16178869,0.01747468,0.029047264,0.0007133183],"about_ca_topic_score_codex":0.000060978015,"about_ca_topic_score_gemma":0.00022750742,"teacher_disagreement_score":0.7216058,"about_ca_system_score_codex":0.000008782292,"about_ca_system_score_gemma":0.00005023813,"threshold_uncertainty_score":0.40558788},"labels":[],"label_agreement":null},{"id":"W2036119016","doi":"10.1107/s1744309109038597","title":"Structures of BIR domains from human NAIP and cIAP2","year":2009,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Cell death mechanisms and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Vetenskapsrådet; Knut och Alice Wallenbergs Stiftelse; Karolinska Institutet; Cancerfonden; Stiftelsen för Strategisk Forskning; Genome Canada; Ontario Genomics; European Synchrotron Radiation Facility; Wellcome Trust; Ontario Genomics Institute; Ontario Innovation Trust","keywords":"Business","score_opus":0.010422075612541309,"score_gpt":0.269946815879048,"score_spread":0.2595247402665067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036119016","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99337095,0.0015510207,0.0039096083,0.0004999002,0.00007896523,0.00021435416,0.000079113204,0.00003299068,0.0002631234],"genre_scores_gemma":[0.9929619,0.0025825298,0.0023251632,0.00012242894,0.00008974323,0.0000072750818,0.0018760092,0.000010704143,0.000024257279],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990025,0.00014911633,0.00032422773,0.0003148822,0.00006590134,0.00014337237],"domain_scores_gemma":[0.99900144,0.000030754934,0.00022030766,0.0005546261,0.00012308164,0.00006980659],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009479817,0.00017532473,0.00018347011,0.00014191522,0.0004900815,0.000029219582,0.00022118795,0.00031899224,0.00002489995],"category_scores_gemma":[0.000029501522,0.00015850815,0.0000625642,0.00019843873,0.0004090825,0.00001915836,0.00013623766,0.00012801433,1.7435873e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030987394,0.000016855533,0.0071837227,0.0000057414013,0.00005632592,7.45295e-8,0.00008752247,0.000008646527,0.9763675,0.0143565945,0.00003098868,0.0018550869],"study_design_scores_gemma":[0.002039876,0.001398885,0.6971566,0.00004082637,0.00019494095,0.00006559216,0.0005962391,0.0008352026,0.013019754,0.22740145,0.056423202,0.0008274125],"about_ca_topic_score_codex":0.00007115274,"about_ca_topic_score_gemma":0.00021218731,"teacher_disagreement_score":0.9633477,"about_ca_system_score_codex":0.000006145498,"about_ca_system_score_gemma":0.000015702853,"threshold_uncertainty_score":0.64637744},"labels":[],"label_agreement":null},{"id":"W2037644173","doi":"10.1107/s1744309105019780","title":"Structure of a NAD kinase from<i>Thermotoga maritima</i>at 2.3 Å resolution","year":2005,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Lawrence Berkeley National Laboratory; Basic Energy Sciences; U.S. Public Health Service; Office of Science; National Institutes of Health; University of Toronto; U.S. Department of Energy","keywords":"NAD+ kinase; Cofactor; Thermotoga maritima; Transferase; Protein Data Bank (RCSB PDB); Kinase; Crystallography; Biochemistry; Amino acid; Protein kinase domain; Chemistry; Enzyme; Stereochemistry","score_opus":0.011015806116360626,"score_gpt":0.24929027938390555,"score_spread":0.23827447326754492,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037644173","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935128,0.0011906304,0.0022366531,0.0010727202,0.00034672674,0.0003201836,0.0005678654,0.00016802133,0.00058436306],"genre_scores_gemma":[0.99011844,0.0006085279,0.007382286,0.0002488034,0.00020593917,0.000018889114,0.0013446384,0.000022212513,0.000050257855],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99816006,0.00035772717,0.00057784945,0.00046045004,0.00016171917,0.0002821637],"domain_scores_gemma":[0.9980787,0.00020571075,0.00041961344,0.000934135,0.00025182913,0.000110016386],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013992266,0.00027101967,0.00031021054,0.00025096745,0.0008465386,0.00004876063,0.0004722886,0.00040772482,0.00121921],"category_scores_gemma":[0.00008184271,0.00024558706,0.000098162694,0.00047870792,0.0008088117,0.00042718995,0.000336475,0.00028234103,9.856974e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010958143,0.000020863805,0.005104319,0.000015100869,0.000038791408,1.5419123e-7,0.0003160674,0.00009926464,0.98946995,0.0037202667,0.0002407156,0.0008649411],"study_design_scores_gemma":[0.0061896536,0.0012442709,0.2912098,0.0002157532,0.0007776018,0.00031978087,0.001228939,0.011860354,0.19881485,0.09444421,0.39089957,0.0027952231],"about_ca_topic_score_codex":0.00033007763,"about_ca_topic_score_gemma":0.0028446647,"teacher_disagreement_score":0.7906551,"about_ca_system_score_codex":0.00007826764,"about_ca_system_score_gemma":0.00003494495,"threshold_uncertainty_score":0.99999964},"labels":[],"label_agreement":null},{"id":"W2039662891","doi":"10.1107/s1744309105016301","title":"Crystallization and preliminary crystallographic analysis of an aminoglycoside kinase from<i>Legionella pneumophila</i>","year":2005,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Legionella pneumophila; Crystallization; Phosphotransferase; Legionnaires' disease; Spectinomycin; Aminoglycoside; Chemistry; Legionella; Microbiology; Antibiotics; Crystal (programming language); Enzyme; Crystallography; Biochemistry; Biology; Antibiotic resistance; Bacteria; Organic chemistry; Genetics","score_opus":0.01281311616455534,"score_gpt":0.2589919120875644,"score_spread":0.24617879592300906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039662891","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9890961,0.0013905606,0.0073817177,0.00072039635,0.00019448434,0.00040846193,0.00032741655,0.00023074304,0.0002501375],"genre_scores_gemma":[0.9880555,0.0018402555,0.006828493,0.0002825234,0.00014612444,0.000052544092,0.0027442111,0.000032542717,0.00001779848],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9972304,0.00050222495,0.00088800344,0.0007919214,0.00023130265,0.00035614596],"domain_scores_gemma":[0.9972138,0.000313774,0.00063141243,0.0012498206,0.00037024403,0.00022099259],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00034387867,0.0004114994,0.000592347,0.0010953777,0.0008962921,0.00012744179,0.00047829378,0.0004801596,0.00014148327],"category_scores_gemma":[0.000076703815,0.00039107396,0.00017533191,0.0018605016,0.0012031811,0.0009935364,0.00031779092,0.00031837574,2.5719152e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017629798,0.00008536492,0.015880937,0.000023879365,0.00035178594,7.253492e-7,0.0007394527,0.0009121755,0.9762876,0.0043534883,0.00002833447,0.0011599624],"study_design_scores_gemma":[0.0034661652,0.002214472,0.82572293,0.00012302003,0.0058366354,0.00018114506,0.0023788996,0.076998904,0.013568366,0.03183997,0.035175566,0.002493915],"about_ca_topic_score_codex":0.0003971251,"about_ca_topic_score_gemma":0.002225988,"teacher_disagreement_score":0.9627192,"about_ca_system_score_codex":0.000038097685,"about_ca_system_score_gemma":0.00003821899,"threshold_uncertainty_score":0.9998541},"labels":[],"label_agreement":null},{"id":"W2040093615","doi":"10.1107/s1744309106046070","title":"Purification, crystallization and preliminary X-ray analysis of truncated and mutant forms of VP4 protease from infectious pancreatic necrosis virus","year":2006,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Infectious pancreatic necrosis virus; Capsid; Mutant; Virus; Proteases; Biology; Recombinant DNA; Protease; Virology; Serine protease; Triclinic crystal system; Molecular biology; Chemistry; Enzyme; Biochemistry; Crystallography; Crystal structure; Gene","score_opus":0.007288469765128872,"score_gpt":0.22883504999056992,"score_spread":0.22154658022544105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040093615","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904065,0.0036066489,0.004142195,0.00023747895,0.000056957026,0.0007315989,0.0006008696,0.000090350906,0.00012740458],"genre_scores_gemma":[0.9882325,0.0025921299,0.0004061307,0.000037429865,0.000010719346,0.00007156846,0.008590064,0.000016360222,0.000043119042],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99820536,0.00035389644,0.0007394517,0.00044290774,0.00004839899,0.00020997884],"domain_scores_gemma":[0.9981513,0.00021975918,0.0006749237,0.00061053206,0.00030219366,0.00004131844],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00017316532,0.00028276516,0.0005200854,0.00067306793,0.00052950875,0.00003678167,0.00024198818,0.00038633554,0.00009206689],"category_scores_gemma":[0.00007499171,0.00024834514,0.000119871984,0.0011974009,0.0011659319,0.00025883008,0.00022125499,0.00019038089,1.2539246e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001340635,0.00011637708,0.09778605,0.00005492362,0.0011995676,1.368678e-7,0.0004115163,0.00006244729,0.8946628,0.0051792352,0.000035298603,0.00035757615],"study_design_scores_gemma":[0.001836324,0.00038747228,0.9736344,0.000066075816,0.0036413253,0.000013656779,0.0007139677,0.0011261675,0.0051795333,0.00875851,0.004152068,0.0004904861],"about_ca_topic_score_codex":0.0013102398,"about_ca_topic_score_gemma":0.00076515006,"teacher_disagreement_score":0.8894833,"about_ca_system_score_codex":0.000020667658,"about_ca_system_score_gemma":0.000027482205,"threshold_uncertainty_score":0.9999969},"labels":[],"label_agreement":null},{"id":"W2041371717","doi":"10.1107/s174430910901642x","title":"Crystallographic characterization of the passenger domain of the<i>Bordetella</i>autotransporter BrkA","year":2009,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Domain (mathematical analysis); Microbiology; Characterization (materials science); Chemistry; Materials science; Biology; Nanotechnology; Mathematics","score_opus":0.006238754388780742,"score_gpt":0.22527840690237855,"score_spread":0.2190396525135978,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041371717","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99519557,0.00024068597,0.0008568891,0.0028159777,0.00024413929,0.00040663042,0.00010274149,0.0000205905,0.00011675919],"genre_scores_gemma":[0.9973934,0.0015148503,0.00038875247,0.0002639575,0.00005557956,0.000012368251,0.00033246612,0.000012460661,0.00002613024],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986217,0.00028348417,0.0005070681,0.00029500507,0.00010228266,0.00019045878],"domain_scores_gemma":[0.99805295,0.000019757004,0.00048711422,0.0011766565,0.00022424372,0.00003926911],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015454393,0.0002025998,0.00021945554,0.000119309094,0.0003877007,0.000016040827,0.00075774966,0.00046470732,0.000014330714],"category_scores_gemma":[0.000034256107,0.00013699119,0.00018898984,0.00068140234,0.0010498319,0.0000144397145,0.00023406053,0.00022259078,1.593787e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003948035,0.00003796517,0.018838027,0.000012091311,0.000058356338,2.2105613e-8,0.00007083445,0.0000051421566,0.97800684,0.0023831145,0.000011686089,0.00053642987],"study_design_scores_gemma":[0.0006890921,0.00044908578,0.8727137,0.000043637683,0.00010024681,0.00003690343,0.000100003665,0.0000581057,0.0600543,0.007057558,0.058362946,0.0003344356],"about_ca_topic_score_codex":0.000015208201,"about_ca_topic_score_gemma":0.00014472094,"teacher_disagreement_score":0.91795254,"about_ca_system_score_codex":0.0000062081035,"about_ca_system_score_gemma":0.000047405047,"threshold_uncertainty_score":0.55863386},"labels":[],"label_agreement":null},{"id":"W2043218445","doi":"10.1107/s1744309111033549","title":"Crystallization and preliminary X-ray diffraction analysis of the human XRCC4–XLF complex","year":2011,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Brookhaven National Laboratory; National Institute of Biomedical Imaging and Bioengineering; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"DNA repair protein XRCC4; Crystallography; Crystallization; Materials science; Diffraction; Chemistry; DNA; DNA repair; Physics; Biochemistry; DNA mismatch repair","score_opus":0.024487265153434322,"score_gpt":0.27303125664703676,"score_spread":0.24854399149360243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043218445","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99207366,0.00029409854,0.0062499032,0.00018964501,0.0001006944,0.00039832,0.00007045224,0.000048661834,0.0005745856],"genre_scores_gemma":[0.99607015,0.00070356263,0.001760075,0.00011658483,0.000030286443,0.000039942424,0.0012060561,0.000019479083,0.000053891657],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984463,0.0004039508,0.00045352516,0.0004050353,0.00010499692,0.00018619183],"domain_scores_gemma":[0.99820226,0.000044978402,0.00042547312,0.0010184634,0.00023544896,0.00007339674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020128468,0.00022121721,0.00025621575,0.00031883622,0.0007437247,0.000026631022,0.00044319176,0.0003236378,0.00006523233],"category_scores_gemma":[0.000073867275,0.0001841131,0.000157489,0.0008938984,0.0007822829,0.000036487218,0.0004610711,0.00017539469,3.4061898e-8],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051647618,0.00005314571,0.05779502,0.00001607629,0.0005357992,6.364917e-8,0.00030671328,0.00005086994,0.93529004,0.0056546195,0.00002802389,0.00021797075],"study_design_scores_gemma":[0.000438078,0.00040364798,0.98492986,0.000013488337,0.0007342388,0.000018725026,0.0004148799,0.0024334805,0.0017348723,0.0032477207,0.0053384867,0.0002925213],"about_ca_topic_score_codex":0.00012515472,"about_ca_topic_score_gemma":0.00048743613,"teacher_disagreement_score":0.9335552,"about_ca_system_score_codex":0.000013946901,"about_ca_system_score_gemma":0.000023082279,"threshold_uncertainty_score":0.75079143},"labels":[],"label_agreement":null},{"id":"W2043541147","doi":"10.1107/s1744309111021105","title":"Expression, purification and preliminary crystallographic analysis of Rv3002c, the regulatory subunit of acetolactate synthase (IlvH) from<i>Mycobacterium tuberculosis</i>","year":2011,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Biochemical and Molecular Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Isoleucine; Mycobacterium tuberculosis; Acetolactate synthase; Valine; Recombinant DNA; Biosynthesis; Protein subunit; Biology; Cloning (programming); Enzyme; Microbiology; ATP synthase; Leucine; Biochemistry; Tuberculosis; Amino acid; Gene; Medicine","score_opus":0.01648278533395982,"score_gpt":0.25716083675672347,"score_spread":0.24067805142276363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043541147","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946571,0.0025967378,0.00170802,0.0002795347,0.00004427391,0.00033495063,0.00022208456,0.000021761572,0.00013554169],"genre_scores_gemma":[0.99180436,0.0047805975,0.001016207,0.00006791486,0.000024616875,0.000057232326,0.002219269,0.000017561479,0.000012254733],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99820876,0.00048280903,0.0005333732,0.00043550966,0.00013345016,0.00020611392],"domain_scores_gemma":[0.9978214,0.000116861826,0.00039915706,0.0012018527,0.00035463867,0.00010608419],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028012996,0.00022419899,0.00031484547,0.00035184567,0.00034795684,0.00001949888,0.0005225824,0.00036974048,0.00004374601],"category_scores_gemma":[0.000111495065,0.0001755116,0.00018121698,0.00091347075,0.0015900786,0.00003100984,0.0004675515,0.00022834144,3.3606057e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002491722,0.000069441805,0.03233347,0.000029359275,0.0007200158,1.2955964e-7,0.0002992773,0.0000051679945,0.9653869,0.0006200576,0.000029775289,0.00025721165],"study_design_scores_gemma":[0.0008728734,0.00073910825,0.8287084,0.000059068756,0.0015077689,0.00002397183,0.0009089998,0.0008041599,0.15705802,0.00326455,0.0054968367,0.00055625034],"about_ca_topic_score_codex":0.00020864802,"about_ca_topic_score_gemma":0.00019498503,"teacher_disagreement_score":0.8083289,"about_ca_system_score_codex":0.0000061851297,"about_ca_system_score_gemma":0.00003371084,"threshold_uncertainty_score":0.7157155},"labels":[],"label_agreement":null},{"id":"W2043637209","doi":"10.1107/s1744309112006914","title":"Towards the crystal structure elucidation of eukaryotic UDP-galactopyranose mutase","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research; Western Economic Diversification Canada; Natural Sciences and Engineering Research Council of Canada; Saskatchewan Health Research Foundation; Canadian Light Source","keywords":"Mutase; Crystal structure; Crystallography; Chemistry; Computational biology; Materials science; Biochemistry; Biology; Enzyme","score_opus":0.018023927627154317,"score_gpt":0.2668512111968521,"score_spread":0.2488272835696978,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043637209","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9882574,0.0013692923,0.0064720633,0.0011818315,0.0009372544,0.00049017783,0.0002833403,0.0001483205,0.0008602997],"genre_scores_gemma":[0.9963109,0.00045352365,0.0020126305,0.00021075754,0.00025249505,0.00002944613,0.000685425,0.000022858612,0.000021981754],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9979345,0.0005508298,0.0006000435,0.0003180859,0.00020834115,0.00038819222],"domain_scores_gemma":[0.99782526,0.0002507474,0.00048374315,0.0010251186,0.0002820639,0.00013307133],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041679436,0.0002932225,0.000299338,0.00024224246,0.0010208461,0.00007347109,0.0005961404,0.00034320215,0.0006772481],"category_scores_gemma":[0.00016754204,0.0002085725,0.00011448664,0.000724461,0.0010953253,0.00072804186,0.00028255276,0.00037665718,5.877426e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005853258,0.00003017795,0.01956784,0.000031529526,0.000053351985,6.869023e-8,0.00080653385,0.000033812532,0.9645789,0.013821762,0.00016394685,0.0008535234],"study_design_scores_gemma":[0.002295951,0.0007228416,0.82295835,0.00008670858,0.00072213344,0.00046723607,0.0030021784,0.0015478398,0.045978986,0.03852542,0.08217582,0.0015165503],"about_ca_topic_score_codex":0.00012217888,"about_ca_topic_score_gemma":0.0002078199,"teacher_disagreement_score":0.91859996,"about_ca_system_score_codex":0.0000383908,"about_ca_system_score_gemma":0.000057328627,"threshold_uncertainty_score":0.85053396},"labels":[],"label_agreement":null},{"id":"W2043678742","doi":"10.1107/s1744309109017023","title":"Crystallization and preliminary X-ray studies of the N-domain of the Wilson disease associated protein","year":2009,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Trace Elements in Health","field":"Nursing","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Saskatchewan Health Research Foundation; University of Saskatchewan","keywords":"Crystallography; Crystallization; Diffraction; Domain (mathematical analysis); X-ray crystallography; Synchrotron; Crystal structure; X-ray; Crystal (programming language); Chemistry; Physics; Optics","score_opus":0.021792930512379415,"score_gpt":0.30781736905507406,"score_spread":0.28602443854269466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043678742","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9847932,0.001704453,0.00027129764,0.011536911,0.00027305685,0.0012305719,0.00008545093,0.00006183271,0.000043267857],"genre_scores_gemma":[0.9982745,0.0005701632,0.00069842034,0.0002644359,0.000026200609,0.000040574894,0.00009195027,0.000014257016,0.000019486408],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99757886,0.0010608264,0.0006538282,0.00029100198,0.00019525446,0.00022024896],"domain_scores_gemma":[0.99754,0.00027435605,0.00081360695,0.00094804604,0.0003561523,0.00006783639],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037514934,0.00021764883,0.0002876669,0.00015581971,0.0011267184,0.000022530856,0.00054173195,0.00019524145,0.000007041258],"category_scores_gemma":[0.00059306534,0.00014616901,0.00010242217,0.000925372,0.0013559951,0.00022708671,0.00027478772,0.00032064953,9.979943e-9],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005888781,0.000303718,0.2312813,0.00029254679,0.0003012878,1.4590849e-7,0.004003456,0.00026473653,0.73666894,0.023400303,0.00017154617,0.0027231309],"study_design_scores_gemma":[0.00076593424,0.00049682957,0.9488665,0.0002776472,0.00017023002,0.0000056025383,0.0010212334,0.0008313585,0.0003721208,0.04492523,0.0020523383,0.00021496425],"about_ca_topic_score_codex":0.00003225815,"about_ca_topic_score_gemma":0.00021928514,"teacher_disagreement_score":0.73629683,"about_ca_system_score_codex":0.00006164613,"about_ca_system_score_gemma":0.00004590109,"threshold_uncertainty_score":0.86659205},"labels":[],"label_agreement":null},{"id":"W2044039493","doi":"10.1107/s1744309112022075","title":"Combining<i>in situ</i>proteolysis and mass spectrometry to crystallize<i>Escherichia coli</i>PgaB","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"National Institutes of Health; National Institute of Biomedical Imaging and Bioengineering; Hospital for Sick Children; Canadian Institutes of Health Research; Sick Kids Foundation; Biological and Environmental Research; Natural Sciences and Engineering Research Council of Canada; Cystic Fibrosis Canada; University of Toronto; U.S. Department of Energy","keywords":"Proteolysis; In situ; Mass spectrometry; Escherichia coli; Chemistry; Materials science; Computational biology; Biology; Chromatography; Biochemistry; Organic chemistry; Enzyme","score_opus":0.013055457042630005,"score_gpt":0.2583583288249692,"score_spread":0.24530287178233917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044039493","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9850093,0.0011597538,0.009817652,0.0013222438,0.00044293478,0.00057692465,0.000045286193,0.00017833656,0.0014475343],"genre_scores_gemma":[0.9841987,0.0007232711,0.013969385,0.0005888035,0.00013740227,0.0001087513,0.00020032814,0.000028881068,0.000044500128],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99775815,0.00046785007,0.00056111097,0.000498511,0.00016168019,0.00055271713],"domain_scores_gemma":[0.99834114,0.00023617351,0.00024097077,0.0007657551,0.00013616754,0.00027980318],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00046085494,0.000336146,0.00039490158,0.00056319917,0.00076371996,0.0001290574,0.00041851992,0.00034311827,0.00018676161],"category_scores_gemma":[0.00013634659,0.00031747104,0.00007077951,0.0013212922,0.0005019251,0.0006607091,0.00032111435,0.00041261959,0.0000014266144],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000066049324,0.000033112996,0.034375485,0.000021594793,0.00002986559,2.613733e-7,0.0007219797,0.0000160259,0.9588872,0.005651801,0.00006360983,0.00013299003],"study_design_scores_gemma":[0.004208701,0.0013510431,0.7964718,0.00016415113,0.00041270797,0.0002406017,0.0049177716,0.001001735,0.033010144,0.03681806,0.11847258,0.002930734],"about_ca_topic_score_codex":0.00012411582,"about_ca_topic_score_gemma":0.000461438,"teacher_disagreement_score":0.9258771,"about_ca_system_score_codex":0.000065101136,"about_ca_system_score_gemma":0.000029078976,"threshold_uncertainty_score":0.99992776},"labels":[],"label_agreement":null},{"id":"W2044229526","doi":"10.1107/s1744309112042686","title":"Purification, crystallization and X-ray diffraction analysis of<i>Trypanosoma congolense</i>insect-stage surface antigen (<i>Tc</i>CISSA)","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Trypanosoma species research and implications","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Trypanosoma; Biology; Trypanosoma brucei; Recombinant DNA; Antigen; Extracellular; Peptide sequence; Biochemistry; Genetics; Gene","score_opus":0.031493251875837916,"score_gpt":0.31375717245654294,"score_spread":0.28226392058070504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044229526","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9808825,0.0025612402,0.012193782,0.0020548915,0.00013321197,0.0008824423,0.0003193381,0.00018496701,0.0007876012],"genre_scores_gemma":[0.98268497,0.01023465,0.0034820924,0.00019321365,0.00008520304,0.000060950573,0.0030339991,0.000034809786,0.0001901025],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99743783,0.00043390406,0.00083642936,0.00051462,0.0002828711,0.0004943324],"domain_scores_gemma":[0.99662405,0.0004094979,0.0005580605,0.0013003252,0.0007174162,0.00039065085],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00012991781,0.0003498882,0.00061960384,0.00095769466,0.0009456948,0.000083066116,0.0003080979,0.0004347004,0.00021163914],"category_scores_gemma":[0.00029032724,0.00033068965,0.00020768202,0.0028942325,0.0011379592,0.0007272604,0.00023123958,0.00043859085,5.342847e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000096549884,0.00014975299,0.2245801,0.00005846188,0.00085082214,1.7960234e-7,0.00045590682,0.00005339028,0.76455307,0.008751656,0.00009090088,0.00035918612],"study_design_scores_gemma":[0.00068300293,0.00018609897,0.9465081,0.000022434559,0.0007384582,0.00004711656,0.0005986211,0.0025832173,0.00029574867,0.00036060542,0.047677755,0.00029884296],"about_ca_topic_score_codex":0.00019116313,"about_ca_topic_score_gemma":0.00019455218,"teacher_disagreement_score":0.7642574,"about_ca_system_score_codex":0.0000725708,"about_ca_system_score_gemma":0.00008418146,"threshold_uncertainty_score":0.9999145},"labels":[],"label_agreement":null},{"id":"W2044281971","doi":"10.1107/s1744309109044315","title":"Crystallization and preliminary X-ray diffraction analysis of the MIF4G domain of DAP5","year":2009,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; Boehringer Ingelheim Fonds","keywords":"EIF4G; Crystallization; Translation (biology); Eukaryotic translation; Crystallography; Internal ribosome entry site; Computational biology; Biology; Chemistry; Messenger RNA; Genetics; Gene","score_opus":0.009381353106095764,"score_gpt":0.25471467537792986,"score_spread":0.2453333222718341,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044281971","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.982749,0.0009661776,0.01480162,0.00081394287,0.00007124392,0.00035092907,0.000059191225,0.00001757648,0.0001703364],"genre_scores_gemma":[0.9953229,0.0019513132,0.0020835313,0.00010469468,0.000026207917,0.000016964374,0.00046088884,0.000008920958,0.000024619772],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986535,0.0003857588,0.0004330247,0.0002909923,0.00010065621,0.00013607652],"domain_scores_gemma":[0.9984529,0.00007189762,0.00045317295,0.0007765332,0.0001967161,0.000048803457],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022516128,0.00017080516,0.0002574701,0.00026568686,0.00037683707,0.000017822078,0.00033132988,0.00028738566,0.000016521906],"category_scores_gemma":[0.00009707378,0.00013605662,0.00014229413,0.00083422504,0.00046849842,0.000026910142,0.00016367911,0.000113393755,9.682773e-9],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000097032316,0.00003866628,0.012186198,0.0000136956705,0.00028998186,2.7557151e-8,0.00015800662,0.00015723238,0.9818548,0.004175719,0.000011769222,0.0010168854],"study_design_scores_gemma":[0.00064287276,0.0008884759,0.96566993,0.000039749233,0.0007934221,0.000019211566,0.0005602976,0.0014629251,0.009247944,0.012035253,0.008278861,0.0003610745],"about_ca_topic_score_codex":0.000029322631,"about_ca_topic_score_gemma":0.000100303216,"teacher_disagreement_score":0.97260684,"about_ca_system_score_codex":0.0000078984895,"about_ca_system_score_gemma":0.00002503811,"threshold_uncertainty_score":0.5548228},"labels":[],"label_agreement":null},{"id":"W2044903154","doi":"10.1107/s1744309108010920","title":"Insect-cell expression, crystallization and X-ray data collection of the bradyzoite-specific antigen BSR4 from<i>Toxoplasma gondii</i>","year":2008,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Toxoplasma gondii Research Studies","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Toxoplasma gondii; Crystallization; Antigen; Population; Biology; Glycoprotein; Pathogen; Host (biology); Bacterial adhesin; Molecular biology; Crystallography; Virology; Chemistry; Gene; Genetics; Antibody; Medicine","score_opus":0.0364552703427672,"score_gpt":0.26332733176481204,"score_spread":0.22687206142204486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044903154","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98704755,0.007474928,0.002270587,0.0008876173,0.0004892589,0.0007771616,0.00056539074,0.00014255961,0.00034494913],"genre_scores_gemma":[0.9708805,0.024766428,0.0013054077,0.00008467679,0.000042040927,0.00005198123,0.0026819203,0.000029739704,0.00015728375],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9969903,0.0010777293,0.0007108603,0.0007283583,0.000116875824,0.00037583266],"domain_scores_gemma":[0.99638766,0.00069586956,0.0005583417,0.0019432426,0.0003501357,0.00006475231],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":["sts"],"category_scores_codex":[0.00029268762,0.00034953578,0.00044381173,0.0003587128,0.0026706096,0.000040185125,0.0012067291,0.00056078524,0.00009493476],"category_scores_gemma":[0.00023080289,0.00028280975,0.00009325732,0.0010750259,0.0027589593,0.00049713865,0.0015944531,0.0006489051,8.4525084e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013999736,0.00008064024,0.07610655,0.000020631574,0.00015584605,3.3691123e-7,0.0009668263,0.000017315355,0.92032105,0.0004294284,0.0015245342,0.0002368284],"study_design_scores_gemma":[0.0032505433,0.0004249916,0.72575164,0.00010111291,0.0001399591,0.00017079848,0.0011363904,0.0005871717,0.016401002,0.0023224868,0.24892385,0.0007900583],"about_ca_topic_score_codex":0.00034515077,"about_ca_topic_score_gemma":0.0004909089,"teacher_disagreement_score":0.90392005,"about_ca_system_score_codex":0.000040081966,"about_ca_system_score_gemma":0.000103488535,"threshold_uncertainty_score":0.9999624},"labels":[],"label_agreement":null},{"id":"W2047893790","doi":"10.1107/s1744309105013278","title":"Purification, crystallization and preliminary diffraction studies of an ectromelia virus glutaredoxin","year":2005,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Alberta Heritage Foundation for Medical Research; Fondation pour la Recherche Médicale; U.S. Department of Energy; National Institutes of Health; National Science Foundation","keywords":"Ectromelia virus; Orthopoxvirus; Ribonucleotide reductase; Vaccinia; Biology; Glutaredoxin; Ectromelia; Poxviridae; Virology; Virus; Gene; Protein subunit; Genetics; Recombinant DNA; Thioredoxin","score_opus":0.021050550185943786,"score_gpt":0.30961075847524533,"score_spread":0.28856020828930157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047893790","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917233,0.0035699632,0.0031577148,0.0007998373,0.00010130477,0.00039981998,0.00008481469,0.00004383075,0.00011940361],"genre_scores_gemma":[0.9807136,0.014025325,0.0034778658,0.00008535758,0.00016530586,0.00006132415,0.0014029357,0.0000227442,0.000045525834],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983694,0.00035691174,0.00048089313,0.00045026373,0.000115740426,0.00022679025],"domain_scores_gemma":[0.9983128,0.00007602444,0.0002896206,0.00072867854,0.00047672068,0.000116177944],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030493835,0.00022636655,0.00024708282,0.00022728159,0.0006025276,0.000047050722,0.00029987964,0.0003272512,0.000026395017],"category_scores_gemma":[0.00018801575,0.00021480225,0.000058833615,0.0003449957,0.00083820085,0.00009139446,0.00024803143,0.00018370173,1.1894372e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021693889,0.00006688031,0.0024007917,0.000036865822,0.00011862825,7.7380335e-8,0.00028970354,0.000052885145,0.98988175,0.0014239878,0.00003617335,0.0054752966],"study_design_scores_gemma":[0.0059612105,0.00792751,0.5543534,0.00017842118,0.00056374684,0.000456751,0.004217678,0.015555328,0.07205722,0.018850956,0.31723472,0.002643036],"about_ca_topic_score_codex":0.000050526818,"about_ca_topic_score_gemma":0.0004982017,"teacher_disagreement_score":0.91782457,"about_ca_system_score_codex":0.000023719853,"about_ca_system_score_gemma":0.000042890715,"threshold_uncertainty_score":0.8759381},"labels":[],"label_agreement":null},{"id":"W2049250116","doi":"10.1107/s1744309110040649","title":"Structures of bacterial biosynthetic arginine decarboxylases","year":2010,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Polyamine Metabolism and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium","funders":"National Institute of General Medical Sciences; National Institutes of Health","keywords":"Cofactor; Campylobacter jejuni; Stereochemistry; Dimer; Tetramer; Biochemistry; Active site; Monomer; Escherichia coli; Biology; Biosynthesis; Enzyme; Chemistry; Bacteria; Gene; Genetics","score_opus":0.008391597680262226,"score_gpt":0.2654146305448336,"score_spread":0.2570230328645714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049250116","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99602294,0.00043652154,0.0018952781,0.00045132983,0.0003118899,0.0002538014,0.00018202436,0.000039863404,0.0004063384],"genre_scores_gemma":[0.9935639,0.0010389251,0.0033823703,0.00006644625,0.00020301098,0.00004237962,0.001657719,0.00001806705,0.000027202765],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99894786,0.00012502326,0.0003588856,0.00031821287,0.000066136454,0.00018390307],"domain_scores_gemma":[0.9985031,0.00006035738,0.00023725144,0.0009318725,0.0001776917,0.00008975564],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011777002,0.00019311787,0.00019676248,0.00017060224,0.000358198,0.000027736456,0.0004536362,0.0002996797,0.00009468851],"category_scores_gemma":[0.00014347953,0.0001756127,0.000086089836,0.00031279368,0.0009051235,0.00001798542,0.00025346776,0.00021875769,9.8793244e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033416236,0.000025720792,0.004930071,0.000008117644,0.00005322989,3.127827e-8,0.00003751846,0.000002785852,0.9796089,0.014205602,0.000063072395,0.0010315445],"study_design_scores_gemma":[0.002242868,0.00063201314,0.19926852,0.00002104465,0.00028249813,0.0002091709,0.0003951117,0.0006193682,0.09008741,0.03155948,0.67349577,0.0011867228],"about_ca_topic_score_codex":0.000039516275,"about_ca_topic_score_gemma":0.00038667052,"teacher_disagreement_score":0.8895215,"about_ca_system_score_codex":0.0000024888814,"about_ca_system_score_gemma":0.000044376786,"threshold_uncertainty_score":0.7161278},"labels":[],"label_agreement":null},{"id":"W2049359175","doi":"10.1107/s1744309112036937","title":"Structure of the HECT C-lobe of the UBR5 E3 ubiquitin ligase","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Ubiquitin; Ubiquitin ligase; DNA ligase; Ubiquitin-Protein Ligases; Chemistry; Linker; Biochemistry; Cell biology; NEDD4; Ubiquitin-conjugating enzyme; Deubiquitinating enzyme; Biology; Enzyme; Gene","score_opus":0.012807084946853365,"score_gpt":0.25811706717018823,"score_spread":0.24530998222333486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049359175","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966127,0.0012709631,0.00019452685,0.000702581,0.0002637584,0.0003792067,0.00018821846,0.00001426916,0.000373725],"genre_scores_gemma":[0.9986873,0.00044499218,0.000304809,0.00018969402,0.00010419668,0.000014962844,0.00020379643,0.0000139981485,0.000036229947],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99866235,0.00047563048,0.0003640417,0.00018723073,0.000100462166,0.00021026471],"domain_scores_gemma":[0.9982076,0.000058406637,0.0003998241,0.0010908284,0.00018466235,0.000058637976],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016828168,0.00017237735,0.00017167795,0.00006646234,0.00050462555,0.00001347199,0.0006841371,0.00029338067,0.000042020918],"category_scores_gemma":[0.0001573207,0.00010978992,0.00015459173,0.00045189957,0.0009811188,0.000019940442,0.00056160113,0.00023597995,3.0753952e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024453811,0.000022764263,0.0653229,0.00002409121,0.00006314109,5.319798e-9,0.00017650958,0.000010647971,0.9294782,0.0045978255,0.000071742805,0.0002076857],"study_design_scores_gemma":[0.00089157064,0.00028354756,0.38634583,0.00007076806,0.00017405949,0.00010475828,0.0005798801,0.000099130804,0.53509825,0.006349083,0.06954099,0.0004621135],"about_ca_topic_score_codex":0.000043230175,"about_ca_topic_score_gemma":0.00017267863,"teacher_disagreement_score":0.39437997,"about_ca_system_score_codex":0.000008651803,"about_ca_system_score_gemma":0.000049990205,"threshold_uncertainty_score":0.4477103},"labels":[],"label_agreement":null},{"id":"W2050371378","doi":"10.1107/s1744309106046902","title":"The molecular structure of Rv1873, a conserved hypothetical protein from<i>Mycobacterium tuberculosis</i>, at 1.38 Å resolution","year":2006,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; Alberta Heritage Foundation for Medical Research; Fondation pour la Recherche Médicale; U.S. Department of Energy; National Science Foundation","keywords":"Open reading frame; Mycobacterium tuberculosis; Monoclinic crystal system; Protein structure; Gene; Protein tertiary structure; Crystallography; Computational biology; Sequence alignment; Hypothetical protein; Molecular replacement; Structural similarity; Peptide sequence; Crystal structure; Biology; Structural genomics; Genetics; Resolution (logic); Chemistry; Tuberculosis; Biochemistry; Computer science; Medicine","score_opus":0.007591122401269383,"score_gpt":0.22587615908405098,"score_spread":0.2182850366827816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050371378","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99349695,0.0013797776,0.0018738223,0.0015897516,0.00031347372,0.0004943639,0.00033917424,0.00012951886,0.0003831548],"genre_scores_gemma":[0.99637085,0.00026992726,0.0020910802,0.0000775338,0.00010279791,0.000040900486,0.0009785186,0.0000227261,0.00004563996],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977739,0.00061687094,0.0006602701,0.00043700763,0.00019091569,0.00032102398],"domain_scores_gemma":[0.9978542,0.0002999311,0.0004440169,0.0010198649,0.00030615248,0.000075840006],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00019056055,0.00027934907,0.00028395338,0.00013534476,0.0013752595,0.00009846744,0.0005026791,0.00038650772,0.00021413199],"category_scores_gemma":[0.000102543,0.00020869335,0.000118261436,0.0004609841,0.0014807008,0.00022259659,0.00032918522,0.00025795397,4.1929502e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012988146,0.000016323434,0.0028964286,0.000014291157,0.00004029269,2.4410846e-7,0.000061825864,0.000043434404,0.9715544,0.025044985,0.0001311754,0.00006669946],"study_design_scores_gemma":[0.0031033165,0.00076202676,0.13995579,0.00014182439,0.00048877276,0.00021016496,0.000602399,0.002823845,0.41049966,0.30544776,0.13434738,0.001617059],"about_ca_topic_score_codex":0.00052366755,"about_ca_topic_score_gemma":0.0025733667,"teacher_disagreement_score":0.56105477,"about_ca_system_score_codex":0.000059720336,"about_ca_system_score_gemma":0.000039429586,"threshold_uncertainty_score":0.99992484},"labels":[],"label_agreement":null},{"id":"W2051613546","doi":"10.1107/s1744309107018945","title":"Structure of O67745_AQUAE, a hypothetical protein from<i>Aquifex aeolicus</i>","year":2007,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Lawrence Berkeley National Laboratory; Basic Energy Sciences; U.S. Public Health Service; Office of Science; National Institutes of Health; University of Toronto; U.S. Department of Energy","keywords":"Aquifex aeolicus; Protein Data Bank (RCSB PDB); Subfamily; Structural genomics; Crystallography; Hydrolase; Protein Data Bank; Domain (mathematical analysis); Protein structure; Chemistry; Biology; Computational biology; Enzyme; Biochemistry; Gene; Mathematics","score_opus":0.011564585140502959,"score_gpt":0.2582304186529227,"score_spread":0.24666583351241972,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051613546","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98444587,0.00045441304,0.012702556,0.00048317594,0.00033884513,0.0004146608,0.0002628085,0.00016230163,0.0007353535],"genre_scores_gemma":[0.9907387,0.0001323177,0.00819163,0.0001644935,0.00016473126,0.000011652912,0.00054660364,0.00002321245,0.000026667729],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99805707,0.00026754176,0.00068840454,0.0004552295,0.00018601307,0.000345746],"domain_scores_gemma":[0.997948,0.0002814871,0.00041735932,0.000926332,0.0002862735,0.00014058348],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027585062,0.0002811343,0.00034227152,0.0002969419,0.00057678204,0.00005080087,0.0005397299,0.00046027405,0.0005407763],"category_scores_gemma":[0.00013007669,0.00024131985,0.000100766134,0.00065508886,0.0011391306,0.00030853198,0.00025197506,0.00034935365,5.3950157e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001087408,0.000022610939,0.0047895918,0.000016769804,0.000038289247,3.1079588e-7,0.00028433674,0.0000076071137,0.97812814,0.01602067,0.000045974673,0.00053694675],"study_design_scores_gemma":[0.003821403,0.0012805106,0.19152397,0.00019034589,0.00044130656,0.00022486514,0.0020937477,0.0007731539,0.42433518,0.28983214,0.08340002,0.0020833386],"about_ca_topic_score_codex":0.00028975066,"about_ca_topic_score_gemma":0.0012785265,"teacher_disagreement_score":0.55379295,"about_ca_system_score_codex":0.00003082707,"about_ca_system_score_gemma":0.000040314633,"threshold_uncertainty_score":0.9840738},"labels":[],"label_agreement":null},{"id":"W2052359161","doi":"10.1107/s1744309111055230","title":"Crystallization and preliminary X-ray diffraction analysis of human dipeptidyl peptidase 10 (DPPY), a component of voltage-gated potassium channels","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Peptidase Inhibition and Analysis","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; University of Toronto","funders":"Knut och Alice Wallenbergs Stiftelse; Karolinska Institutet; Austrian Science Fund; Stiftelsen för Strategisk Forskning; Ontario Genomics Institute; Canadian Institutes of Health Research; Ontario Genomics; Genome Canada; Ontario Innovation Trust; Wellcome Trust; GlaxoSmithKline","keywords":"Crystallization; Potassium; Materials science; Diffraction; Component (thermodynamics); X-ray; Dipeptidyl peptidase; Crystallography; X-ray crystallography; Analytical Chemistry (journal); Chemistry; Chromatography; Optics; Enzyme; Biochemistry; Physics; Thermodynamics; Metallurgy; Organic chemistry","score_opus":0.02111847912721224,"score_gpt":0.29701782273073973,"score_spread":0.27589934360352747,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052359161","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99222153,0.0004790028,0.005698805,0.0005505565,0.000049823655,0.00046502842,0.00015419332,0.00010172159,0.00027936255],"genre_scores_gemma":[0.99330056,0.0006825082,0.0006492658,0.000090214606,0.00006189213,0.00003386983,0.0050535193,0.000023364279,0.00010479347],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.997839,0.00035725147,0.00091708015,0.00036912807,0.00021777453,0.000299807],"domain_scores_gemma":[0.9974293,0.00021486702,0.00079739693,0.00076140434,0.00056017423,0.00023686758],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00034703244,0.00030882497,0.00071541854,0.0014926284,0.00055984914,0.000029684797,0.00017781547,0.00036405487,0.0003707235],"category_scores_gemma":[0.00011800362,0.00028445845,0.00027840378,0.0021380133,0.00091634115,0.00042952533,0.00019902982,0.00029624527,1.58239e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019390263,0.0003429879,0.10357317,0.00013762216,0.001354606,3.4348844e-7,0.00072435604,0.00012587346,0.8912932,0.0019623614,0.000054050855,0.00023747463],"study_design_scores_gemma":[0.0016707283,0.0008031816,0.9729993,0.00021854271,0.0035852327,0.000048196784,0.001336892,0.014586573,0.0010693643,0.00046746424,0.0027526976,0.000461851],"about_ca_topic_score_codex":0.00016021282,"about_ca_topic_score_gemma":0.00008123382,"teacher_disagreement_score":0.89022386,"about_ca_system_score_codex":0.000047401005,"about_ca_system_score_gemma":0.000028721277,"threshold_uncertainty_score":0.9999608},"labels":[],"label_agreement":null},{"id":"W2053441864","doi":"10.1107/s1744309109014729","title":"Purification, crystallization and preliminary X-ray analysis of isocitrate dehydrogenase kinase/phosphatase from<i>Escherichia coli</i>","year":2009,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Isocitrate dehydrogenase; Crystallization; Escherichia coli; Biochemistry; Dehydrogenase; Phosphatase; Glyoxylate cycle; Citric acid cycle; IDH1; Phosphorylation; Chemistry; Molecular biology; Biology; Enzyme; Gene; Organic chemistry","score_opus":0.011339849867248652,"score_gpt":0.25131278727029704,"score_spread":0.2399729374030484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053441864","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9771834,0.0027877856,0.017502997,0.001061786,0.00016355513,0.00043704693,0.00052227837,0.00017211951,0.00016905779],"genre_scores_gemma":[0.98799753,0.0021809249,0.005609642,0.00040197108,0.00005624962,0.000036653284,0.003684318,0.000016975739,0.000015730588],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977423,0.00043146228,0.0007605041,0.0006083094,0.00017719157,0.0002802222],"domain_scores_gemma":[0.99764025,0.0002529776,0.00061308924,0.00096414844,0.0003726166,0.00015692935],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00029871677,0.00032585784,0.00048107572,0.0005210861,0.00081824325,0.00010834919,0.0004271231,0.00037713564,0.00020821067],"category_scores_gemma":[0.00010946389,0.00030871778,0.00013494797,0.0017956602,0.0007006712,0.0005560743,0.00012681534,0.00024620278,2.707663e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014790587,0.000060414965,0.0059758187,0.00001573098,0.00025328135,3.8750196e-7,0.0005040345,0.00050428294,0.98229694,0.0097045265,0.00008465591,0.00045200647],"study_design_scores_gemma":[0.002689949,0.0016943552,0.8537979,0.00009542461,0.004738576,0.000020265277,0.0015732954,0.03339694,0.039169095,0.041656878,0.019366944,0.0018003511],"about_ca_topic_score_codex":0.00022902754,"about_ca_topic_score_gemma":0.00028337058,"teacher_disagreement_score":0.9431279,"about_ca_system_score_codex":0.00003343553,"about_ca_system_score_gemma":0.00004636861,"threshold_uncertainty_score":0.9999365},"labels":[],"label_agreement":null},{"id":"W2055089498","doi":"10.1107/s1744309110018981","title":"Crystallization and preliminary X-ray diffraction analysis of the<i>Thermoanaerobacter ethanolicus</i>secondary alcohol dehydrogenase I86A mutant","year":2010,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Orthorhombic crystal system; Alcohol dehydrogenase; Crystallography; Stereospecificity; Stereochemistry; Crystallization; Alcohol oxidoreductase; Resolution (logic); Chemistry; Mutant; Crystal structure; Alcohol; Enzyme; NAD+ kinase; Biochemistry; Organic chemistry; Catalysis","score_opus":0.010436393098704514,"score_gpt":0.25384217426339833,"score_spread":0.24340578116469383,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055089498","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955582,0.00025085895,0.0019204248,0.0006880893,0.00057240424,0.0004402734,0.00017433554,0.000114632094,0.00028076238],"genre_scores_gemma":[0.9975005,0.00053494115,0.0010193049,0.00021171702,0.00007854783,0.00004976924,0.00055486977,0.000023073168,0.000027306216],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9979592,0.0004341367,0.0006414003,0.00050975,0.00018202238,0.00027349204],"domain_scores_gemma":[0.9975508,0.00026962385,0.0006203958,0.0011391119,0.00030438128,0.000115704264],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034814424,0.0003013182,0.0003828816,0.0005196114,0.001050848,0.000093252405,0.00049819046,0.0004545967,0.00036382122],"category_scores_gemma":[0.00014304399,0.00023102642,0.0001774012,0.0014818042,0.0011550366,0.00050935766,0.00033751418,0.0005646736,1.9178994e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006972765,0.000032724452,0.020341216,0.000022873868,0.00022913262,1.6813502e-7,0.00039412917,0.000119605036,0.9747332,0.003532299,0.000017878172,0.00050706876],"study_design_scores_gemma":[0.00091975584,0.00024999594,0.96006995,0.000028381945,0.0014891023,0.00008625271,0.00039074017,0.0051711337,0.013598846,0.00558743,0.0118391765,0.000569221],"about_ca_topic_score_codex":0.00019558058,"about_ca_topic_score_gemma":0.0019441746,"teacher_disagreement_score":0.9611343,"about_ca_system_score_codex":0.000023740246,"about_ca_system_score_gemma":0.000054740074,"threshold_uncertainty_score":0.94209844},"labels":[],"label_agreement":null},{"id":"W2055865248","doi":"10.1107/s1744309112047549","title":"Structure of<i>Pisum sativum</i>Rubisco with bound ribulose 1,5-bisphosphate","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan; Saskatchewan Research Council (Canada); University of Manitoba","funders":"National Research Council Canada; Western Economic Diversification Canada; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; University of Saskatchewan; Canadian Light Source","keywords":"RuBisCO; Ribulose 1,5-bisphosphate; Pisum; Ribulose; Active site; Sativum; Pyruvate carboxylase; Protein subunit; Chemistry; Substrate (aquarium); Photosynthesis; Biology; Biochemistry; Botany; Enzyme","score_opus":0.008356678533557817,"score_gpt":0.25351509229409125,"score_spread":0.24515841376053343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055865248","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9910266,0.0013116541,0.0064927256,0.00026103266,0.00015984625,0.0003027066,0.00014634123,0.000037007725,0.00026213087],"genre_scores_gemma":[0.99530727,0.0014868602,0.0019043655,0.00016331006,0.00008607101,0.00002388663,0.0009745613,0.000024916002,0.000028764518],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99882925,0.00015519807,0.0003137662,0.00029200842,0.00009710633,0.00031266143],"domain_scores_gemma":[0.9985858,0.00004132275,0.00028419506,0.0007396347,0.00021477799,0.00013423817],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012610281,0.0002425304,0.00022443246,0.00011847887,0.00044059995,0.000027773289,0.00035644954,0.00029460058,0.000049787657],"category_scores_gemma":[0.00005495875,0.00019758903,0.00006580127,0.00035525952,0.00061149726,0.000044587017,0.00023372585,0.00018841964,7.522189e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009961603,0.000038384616,0.015587918,0.00002913593,0.00012749035,6.020495e-8,0.00013107155,0.000009009659,0.97774905,0.005972843,0.000022080354,0.00023334564],"study_design_scores_gemma":[0.0031619975,0.0021702768,0.06557583,0.00012723097,0.0005125114,0.000550395,0.0013270511,0.00032966523,0.69445807,0.018137896,0.2118251,0.0018239764],"about_ca_topic_score_codex":0.000051795447,"about_ca_topic_score_gemma":0.0002474668,"teacher_disagreement_score":0.28329098,"about_ca_system_score_codex":0.000010884213,"about_ca_system_score_gemma":0.000053345648,"threshold_uncertainty_score":0.8057447},"labels":[],"label_agreement":null},{"id":"W2059492037","doi":"10.1107/s1744309109050416","title":"Structures of the first representatives of Pfam family PF06938 (DUF1285) reveal a new fold with repeated structural motifs and possible involvement in signal transduction","year":2010,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Biological and Environmental Research; Pacific Northwest National Laboratory; Basic Energy Sciences; Lawrence Berkeley National Laboratory; National Center for Research Resources; National Institute of General Medical Sciences; Medical Research Council; Office of Science; National Institutes of Health; U.S. Department of Energy","keywords":"Pleckstrin homology domain; Structural genomics; Computational biology; Biology; Context (archaeology); Genetics; Homology (biology); Gene; Signal transduction; Protein structure; Biochemistry","score_opus":0.013805498340893696,"score_gpt":0.25618538482661696,"score_spread":0.24237988648572326,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059492037","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973319,0.0002831178,0.00065803534,0.00072970655,0.00028058933,0.0004892858,0.00007169337,0.0000434482,0.00011223516],"genre_scores_gemma":[0.9969425,0.00018642005,0.0025919038,0.000060141232,0.00005425683,0.000018702733,0.0001128209,0.000014763803,0.000018445171],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99834234,0.00024997513,0.0006070255,0.0004114355,0.00017652754,0.0002126867],"domain_scores_gemma":[0.9983308,0.00014563669,0.0005087275,0.0007216571,0.00021979454,0.00007339025],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021843711,0.00024317525,0.00032053044,0.0002719606,0.0005036703,0.000044971282,0.00041494993,0.0002621386,0.000091957845],"category_scores_gemma":[0.00005396141,0.00016719362,0.0000685902,0.0007920237,0.0012885244,0.00037421662,0.0001659574,0.00041887347,1.7813738e-8],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015548844,0.000013819134,0.11057981,0.000043970107,0.00003959088,1.225201e-7,0.0011829829,0.00015228274,0.88368833,0.0038297432,0.000023602386,0.00029025925],"study_design_scores_gemma":[0.001428031,0.00040778687,0.93822044,0.00007035363,0.00010816106,0.00007583968,0.0013797806,0.00054329395,0.032386415,0.024363212,0.0006950612,0.00032163563],"about_ca_topic_score_codex":0.0012480222,"about_ca_topic_score_gemma":0.0063653914,"teacher_disagreement_score":0.8513019,"about_ca_system_score_codex":0.0000180821,"about_ca_system_score_gemma":0.000075523756,"threshold_uncertainty_score":0.6817958},"labels":[],"label_agreement":null},{"id":"W2060718588","doi":"10.1107/s1744309112017939","title":"Structure of a short-chain dehydrogenase/reductase from<i>Bacillus anthracis</i>","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Argonne National Laboratory; National Institute of Allergy and Infectious Diseases; Biological and Environmental Research; National Institutes of Health; U.S. Department of Health and Human Services; U.S. Department of Energy","keywords":"Bacillus anthracis; Reductase; Microbiology; Chemistry; Biochemistry; Enzyme; Biology; Bacteria; Genetics","score_opus":0.016397104436591932,"score_gpt":0.2671863432567048,"score_spread":0.2507892388201129,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060718588","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99188185,0.0025412259,0.0030597935,0.0002873004,0.00075322716,0.00031113008,0.0007701908,0.00015072503,0.00024454342],"genre_scores_gemma":[0.9935699,0.00077934517,0.0036805838,0.00014440206,0.00025233225,0.00001854386,0.0015211685,0.000024800414,0.000008934577],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980414,0.0004076941,0.00060129905,0.000385548,0.00016778783,0.00039628454],"domain_scores_gemma":[0.99806136,0.00022656105,0.00032185583,0.0009825993,0.00022010104,0.0001875381],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00020183201,0.00030844111,0.00036281193,0.00021697841,0.00070475583,0.000047518955,0.00047557807,0.00040227943,0.00060491345],"category_scores_gemma":[0.00010283423,0.00026927405,0.00010920677,0.00060633675,0.00093748583,0.00060971704,0.00026179338,0.00031883232,5.2811566e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054395616,0.000033425516,0.016111523,0.000017313903,0.00006143224,1.3508426e-7,0.0005308618,0.00002113904,0.9780301,0.004559606,0.00010248206,0.00047758894],"study_design_scores_gemma":[0.0036902814,0.0011470694,0.16532472,0.00019072222,0.0012381168,0.0005853526,0.0050751115,0.0022703114,0.6142872,0.08303702,0.11960808,0.0035460421],"about_ca_topic_score_codex":0.00019982678,"about_ca_topic_score_gemma":0.00037006117,"teacher_disagreement_score":0.36374292,"about_ca_system_score_codex":0.000034169145,"about_ca_system_score_gemma":0.00003523599,"threshold_uncertainty_score":0.9999759},"labels":[],"label_agreement":null},{"id":"W2063125381","doi":"10.1107/s1744309107051640","title":"Expression, purification and preliminary X-ray diffraction studies of RebC","year":2007,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Cancer therapeutics and mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Queen's University","keywords":"Escherichia coli; Enzyme; Chemistry; X-ray; Monooxygenase; Crystallography; Stereochemistry; Biochemistry; Gene; Cytochrome P450; Optics; Physics","score_opus":0.022787465006936118,"score_gpt":0.31122709269721643,"score_spread":0.2884396276902803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2063125381","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9772444,0.0056906063,0.015875716,0.00051340146,0.00019447865,0.000302529,0.00002389,0.000031192136,0.00012383776],"genre_scores_gemma":[0.98378843,0.012673578,0.0029077418,0.000107203115,0.000076193566,0.00002639773,0.0003655446,0.0000138630385,0.000041059415],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99899954,0.00012537814,0.00035809926,0.00029509788,0.00006789363,0.00015396613],"domain_scores_gemma":[0.99878216,0.00008608131,0.000275924,0.00052714976,0.00026571524,0.00006300072],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031864436,0.00015429563,0.00016529599,0.00016207245,0.00040778422,0.000015378455,0.0001753901,0.00024222373,0.000006316775],"category_scores_gemma":[0.000077992525,0.00014150774,0.000048230926,0.00021907418,0.0005196202,0.000023995959,0.00019112122,0.00012982407,2.3810163e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015367818,0.000024519291,0.0034472628,0.000026046378,0.00009087952,6.648734e-8,0.00023144567,0.000007347519,0.99093586,0.002487433,0.0000337206,0.0025617434],"study_design_scores_gemma":[0.003762865,0.0040935017,0.51850706,0.00021545075,0.0004828754,0.00022205632,0.009888883,0.00083639356,0.14902379,0.03691906,0.27442148,0.0016265503],"about_ca_topic_score_codex":0.000016463093,"about_ca_topic_score_gemma":0.00010064108,"teacher_disagreement_score":0.8419121,"about_ca_system_score_codex":0.000011994584,"about_ca_system_score_gemma":0.000019421452,"threshold_uncertainty_score":0.5770518},"labels":[],"label_agreement":null},{"id":"W2065898689","doi":"10.1107/s1744309108014449","title":"Expression, purification, crystallization and preliminary X-ray analysis of Rv3117, a probable thiosulfate sulfurtransferase (CysA3) from<i>Mycobacterium tuberculosis</i>","year":2008,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Crystallization; Sulfurtransferase; Mycobacterium tuberculosis; Thiosulfate; Tuberculosis; Chemistry; Microbiology; Biology; Materials science; Metallurgy; Biochemistry; Medicine; Sulfur; Pathology; Organic chemistry; Enzyme","score_opus":0.013491851830360686,"score_gpt":0.23918611697795752,"score_spread":0.22569426514759683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065898689","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9741131,0.0013276883,0.022374183,0.0006029356,0.00023862778,0.0005397973,0.0003956108,0.00020678023,0.00020125681],"genre_scores_gemma":[0.9866963,0.0046349373,0.00534279,0.00013885551,0.00007273453,0.00009805024,0.0029531226,0.000028071356,0.00003512717],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9973149,0.0005508025,0.0008806125,0.00071531115,0.00022413098,0.00031429357],"domain_scores_gemma":[0.99735755,0.0003167249,0.0005097618,0.0011136696,0.00054020033,0.0001620748],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00028348598,0.0003668349,0.0005545865,0.00067145564,0.001217668,0.000078087876,0.0004063663,0.00044018234,0.0002776287],"category_scores_gemma":[0.00011828316,0.00033015493,0.00015236936,0.0016557085,0.0010923828,0.00073619245,0.000221375,0.00028266964,3.4983955e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014389145,0.000060121365,0.03514135,0.000038628878,0.00028080196,5.266334e-7,0.0012779379,0.00037329821,0.96092904,0.0015641674,0.000098383985,0.00009183439],"study_design_scores_gemma":[0.002629615,0.00095682626,0.9077454,0.00015524225,0.003268631,0.00013484599,0.0013213125,0.008071792,0.043522723,0.011712685,0.01876557,0.0017153193],"about_ca_topic_score_codex":0.00027162067,"about_ca_topic_score_gemma":0.000462885,"teacher_disagreement_score":0.9174063,"about_ca_system_score_codex":0.000034357065,"about_ca_system_score_gemma":0.000059625283,"threshold_uncertainty_score":0.99991506},"labels":[],"label_agreement":null},{"id":"W2066061472","doi":"10.1107/s1744309111043910","title":"Expression, purification, crystallization and preliminary crystallographic analysis of PilA from the nontypeable<i>Haemophilus influenzae</i>type IV pilus","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Peptidase Inhibition and Analysis","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"National Institute on Deafness and Other Communication Disorders; Canadian Institutes of Health Research; National Institutes of Health; Michael Smith Health Research BC; Canadian Light Source","keywords":"Pilin; Pilus; Crystallization; Haemophilus influenzae; Microbiology; Crystallography; Protein subunit; Biology; Biofilm; Fimbriae Proteins; Chemistry; Virulence; Bacteria; Genetics; Gene","score_opus":0.021700499629623497,"score_gpt":0.28443647029674557,"score_spread":0.26273597066712207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066061472","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98591036,0.0039901333,0.0060550645,0.0025795705,0.000095705625,0.00064881565,0.000223753,0.0001602467,0.0003363741],"genre_scores_gemma":[0.9898432,0.0034235877,0.0019812111,0.00073260255,0.00012451102,0.00006318728,0.0037675702,0.000030333278,0.000033801858],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99738014,0.00057395664,0.0009095651,0.00049804535,0.0002665555,0.00037171357],"domain_scores_gemma":[0.9964369,0.00058049004,0.0006497031,0.0013611991,0.0007026744,0.0002690559],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00045328613,0.0003701854,0.0006310239,0.0008819579,0.0010096417,0.000069608155,0.00036905168,0.00042667615,0.00021503723],"category_scores_gemma":[0.0003084199,0.0002863465,0.00025863183,0.0035386817,0.0012425036,0.00052432553,0.00029650435,0.00043816137,2.9020885e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031702113,0.00020300996,0.42578703,0.000050199444,0.001637765,4.5638413e-7,0.0014313785,0.00009490728,0.56595874,0.003958274,0.0002503079,0.00031088837],"study_design_scores_gemma":[0.0012359814,0.00034360433,0.9685028,0.00016793807,0.0035348302,0.000059611993,0.001332099,0.0049057016,0.0003946678,0.0025665758,0.01645592,0.0005002606],"about_ca_topic_score_codex":0.00025087767,"about_ca_topic_score_gemma":0.000223646,"teacher_disagreement_score":0.5655641,"about_ca_system_score_codex":0.000037892227,"about_ca_system_score_gemma":0.00005696751,"threshold_uncertainty_score":0.9999589},"labels":[],"label_agreement":null},{"id":"W2066086125","doi":"10.1107/s1744309108033046","title":"Purification, crystallization and X-ray diffraction analysis of pavine<i>N</i>-methyltransferase from<i>Thalictrum flavum</i>","year":2008,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Benzylisoquinoline; Chemistry; Methyltransferase; Derivative (finance); Crystallization; Size-exclusion chromatography; Complementary DNA; Enzyme; Anomalous scattering; X-ray crystallography; Escherichia coli; Crystallography; Stereochemistry; Biochemistry; Diffraction; DNA; Biosynthesis; Organic chemistry; Methylation; Physics","score_opus":0.01668775958166086,"score_gpt":0.23835048307365378,"score_spread":0.22166272349199292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066086125","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956196,0.0008695329,0.000701809,0.0016101918,0.00009745215,0.00037042648,0.00047097812,0.00016403542,0.000095959935],"genre_scores_gemma":[0.98979694,0.0037656869,0.0012120132,0.00018998767,0.00007429707,0.00005275079,0.004884582,0.000005429813,0.000018320743],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99775434,0.0005015645,0.00070433615,0.00057448645,0.00019446746,0.00027081437],"domain_scores_gemma":[0.9979994,0.00061195967,0.00044056942,0.00043597058,0.00036084533,0.00015122915],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022465605,0.00030427214,0.00047277875,0.00027118612,0.0011214091,0.00005535234,0.0004285825,0.00039134122,0.00019558737],"category_scores_gemma":[0.00011189098,0.00018378465,0.00018852802,0.0024086805,0.0008068915,0.0004605938,0.00015141911,0.00027632862,2.032755e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004018449,0.00006277821,0.14105375,0.000006765481,0.00045576802,2.6919164e-7,0.00033474364,0.000010621833,0.85628563,0.0008703986,0.000023235456,0.00085585355],"study_design_scores_gemma":[0.00031949911,0.00016801222,0.98949707,0.000012717826,0.0006538342,0.00001676697,0.0003021279,0.001265469,0.0010069225,0.0016853341,0.004713381,0.00035886106],"about_ca_topic_score_codex":0.0012768494,"about_ca_topic_score_gemma":0.0020190193,"teacher_disagreement_score":0.85527873,"about_ca_system_score_codex":0.000030853833,"about_ca_system_score_gemma":0.000017483573,"threshold_uncertainty_score":0.8625086},"labels":[],"label_agreement":null},{"id":"W2067654975","doi":"10.1107/s1744309107016880","title":"Expression, purification, crystallization and preliminary X-ray analysis of<i>Pseudomonas fluorescens</i>AlgK","year":2007,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; McMaster University; University of Toronto","funders":"","keywords":"Pseudomonas fluorescens; Crystallization; X-ray; Materials science; Crystallography; Microbiology; Chemistry; Biology; Physics; Bacteria; Optics; Genetics; Organic chemistry","score_opus":0.010511510080403014,"score_gpt":0.2638671457544318,"score_spread":0.2533556356740288,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067654975","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89656836,0.0012435927,0.100619614,0.0006462748,0.00016155462,0.0004223581,0.00008178318,0.000073111434,0.00018336144],"genre_scores_gemma":[0.98733085,0.0034194412,0.0044500143,0.0001464801,0.00010084247,0.00003070129,0.0044288947,0.000024117524,0.00006864317],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99815494,0.00025383255,0.0006661717,0.00055041636,0.00013515684,0.00023949287],"domain_scores_gemma":[0.9979196,0.000085275984,0.00047783324,0.0008847381,0.0005037187,0.0001287957],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00046553448,0.00025455456,0.00029261073,0.0006439376,0.0005701805,0.00004474523,0.0003078138,0.00039620025,0.000034654808],"category_scores_gemma":[0.00017574585,0.00025127333,0.00011328233,0.0012765937,0.000657151,0.000057738904,0.00024483885,0.00017954796,7.150644e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001526536,0.000052809195,0.042470366,0.000025203159,0.0003067263,1.2174002e-7,0.00024736192,0.000101952646,0.9539162,0.002018781,0.00007778979,0.0006300185],"study_design_scores_gemma":[0.0012146558,0.0006426527,0.8808518,0.000043119522,0.00097004673,0.00005387415,0.0009891337,0.0021437774,0.043479,0.0014055555,0.067346364,0.0008600028],"about_ca_topic_score_codex":0.000021464035,"about_ca_topic_score_gemma":0.00012556039,"teacher_disagreement_score":0.9104372,"about_ca_system_score_codex":0.000014612942,"about_ca_system_score_gemma":0.000032694035,"threshold_uncertainty_score":0.999994},"labels":[],"label_agreement":null},{"id":"W2069051524","doi":"10.1107/s1744309108009275","title":"Structure of<i>Staphylococcus aureus</i>5′-methylthioadenosine/<i>S</i>-adenosylhomocysteine nucleosidase","year":2008,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Biochemical and Molecular Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research; Hospital for Sick Children","keywords":"Staphylococcus aureus; Chemistry; Microbiology; Biology; Genetics; Bacteria","score_opus":0.013296165163468666,"score_gpt":0.2715918806191681,"score_spread":0.25829571545569946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069051524","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99349046,0.002887893,0.00185885,0.00081740797,0.00010524732,0.00036991536,0.00017819964,0.000048460475,0.00024357316],"genre_scores_gemma":[0.99284476,0.0033110417,0.00182423,0.000262642,0.0001294767,0.00001989748,0.001517566,0.000029160932,0.00006124499],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982997,0.00030029498,0.00045615382,0.00047628855,0.00015868038,0.00030885314],"domain_scores_gemma":[0.9981581,0.00005389388,0.00023874774,0.0010260376,0.00036392093,0.00015930373],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00010294996,0.00027453998,0.0002822611,0.00022387657,0.000629528,0.000021014372,0.000606692,0.00048702312,0.00005432466],"category_scores_gemma":[0.00014753126,0.00024977274,0.00014252406,0.00056920614,0.0013664976,0.000022581531,0.0004901891,0.0003506569,1.5858487e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000092167094,0.00004112617,0.010287042,0.000030455933,0.00012078087,8.4157944e-7,0.000082585706,0.000009923688,0.9878015,0.00092692696,0.000445841,0.00016080463],"study_design_scores_gemma":[0.004320062,0.002093005,0.08705447,0.00008872404,0.00023206575,0.0006384741,0.00043695822,0.00046741543,0.6219143,0.006985114,0.27389362,0.0018757746],"about_ca_topic_score_codex":0.00006259163,"about_ca_topic_score_gemma":0.00009528919,"teacher_disagreement_score":0.3658872,"about_ca_system_score_codex":0.000012029459,"about_ca_system_score_gemma":0.0000744204,"threshold_uncertainty_score":0.99999547},"labels":[],"label_agreement":null},{"id":"W2070230205","doi":"10.1107/s174430910904250x","title":"Crystallization and initial X-ray diffraction study of the three PASTA domains of the Ser/Thr kinase Stk1 from the human pathogen<i>Staphylococcus aureus</i>","year":2009,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"","keywords":"Threonine; Serine; Biochemistry; Peptidoglycan; Protein-Serine-Threonine Kinases; Kinase; Pathogen; Biology; Staphylococcus aureus; Virulence; Microbiology; Cell wall; Chemistry; Protein kinase A; Bacteria; Enzyme; Gene","score_opus":0.017914710166202816,"score_gpt":0.28882217139531136,"score_spread":0.2709074612291085,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070230205","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99308866,0.0004523466,0.0012741758,0.0028043282,0.00018453799,0.001759584,0.00026544931,0.000057116984,0.00011380395],"genre_scores_gemma":[0.9984731,0.00044224295,0.00021849743,0.0004103452,0.000100001685,0.000038360937,0.0002825135,0.00002287546,0.000012053254],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9974411,0.00076124625,0.00082113146,0.00043006518,0.000295069,0.00025137194],"domain_scores_gemma":[0.99645376,0.00038641036,0.00087001576,0.001754709,0.00045641043,0.0000787048],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00029478574,0.00032570772,0.00043112633,0.0001503081,0.0016524757,0.000054036493,0.0007294279,0.00031047122,0.000027984122],"category_scores_gemma":[0.00021435325,0.00019227157,0.00018276945,0.0011127947,0.0014521923,0.00020858516,0.00038876125,0.0006009174,3.359105e-8],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001601623,0.00023339188,0.23586409,0.000020737141,0.00015253187,3.2636314e-7,0.0010780126,0.000054350556,0.76018584,0.0017866537,0.00005251691,0.0004113844],"study_design_scores_gemma":[0.0015282034,0.00046319066,0.9869168,0.00009769307,0.00034517984,0.000009486933,0.001906457,0.00019157195,0.00036054023,0.0054945634,0.0024866702,0.00019965878],"about_ca_topic_score_codex":0.000461202,"about_ca_topic_score_gemma":0.004155425,"teacher_disagreement_score":0.7598253,"about_ca_system_score_codex":0.000047504203,"about_ca_system_score_gemma":0.00007928091,"threshold_uncertainty_score":0.99964726},"labels":[],"label_agreement":null},{"id":"W2071200189","doi":"10.1107/s1744309106018136","title":"Structure of the synthetase domain of human CTP synthetase, a target for anticancer therapy","year":2006,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Biochemical and Molecular Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Vetenskapsrådet; Knut och Alice Wallenbergs Stiftelse; Karolinska Institutet; Cancerfonden; VINNOVA; Stiftelsen för Strategisk Forskning; Wellcome Trust; European Synchrotron Radiation Facility; Genome Canada; Ontario Innovation Trust; GlaxoSmithKline","keywords":"Biochemistry; Cytidine; Enzyme; Nucleic acid; Eukaryote; Active site; Chemistry; Biology; Biophysics; Gene","score_opus":0.010861581569480198,"score_gpt":0.28543336372150935,"score_spread":0.27457178215202915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2071200189","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943562,0.0013593705,0.002486924,0.00059978105,0.000057414232,0.00052622025,0.0004901794,0.000011490572,0.00011243312],"genre_scores_gemma":[0.99667865,0.00035072735,0.0016103572,0.000060361515,0.000058404526,0.000034229382,0.0011680777,0.000016106369,0.000023080454],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988727,0.00022713102,0.00035640958,0.0002685341,0.000094592164,0.00018060979],"domain_scores_gemma":[0.9986253,0.000055562603,0.00026095947,0.00075862394,0.0002615606,0.000038036036],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011989379,0.00016237302,0.0001974921,0.000087852844,0.00038929709,0.000013251466,0.00048714972,0.00026958322,0.000024333069],"category_scores_gemma":[0.000057981393,0.000117109834,0.00015847426,0.00029912833,0.0010697774,0.000009179565,0.00021687913,0.0001388869,7.0550024e-9],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000081516155,0.000044326473,0.006666914,0.000031623622,0.000079532336,2.0049239e-8,0.000018978228,0.000013429288,0.9864047,0.006408095,0.000107978056,0.0001428544],"study_design_scores_gemma":[0.0016450848,0.0007067712,0.02497492,0.00003699495,0.00007406878,0.000024594334,0.00013387577,0.00012206053,0.8673135,0.053635363,0.05092044,0.00041229924],"about_ca_topic_score_codex":0.00008911574,"about_ca_topic_score_gemma":0.0002165044,"teacher_disagreement_score":0.119091205,"about_ca_system_score_codex":0.000006785782,"about_ca_system_score_gemma":0.000041881252,"threshold_uncertainty_score":0.47756004},"labels":[],"label_agreement":null},{"id":"W2072605136","doi":"10.1107/s1744309112044041","title":"Crystallization of the DdrB–DNA complex from<i>Deinococcus radiodurans</i>","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Basic Energy Sciences; National Center for Research Resources; National Institute of General Medical Sciences; Biological and Environmental Research; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; U.S. Department of Energy","keywords":"Deinococcus radiodurans; DNA; Deinococcus; DNA repair; Biology; DNA damage; Crystallization; Mechanism (biology); Genetics; Cell biology; Computational biology; Chemistry; Physics","score_opus":0.016447729897223984,"score_gpt":0.26047008691688567,"score_spread":0.24402235701966168,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072605136","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9882425,0.00126095,0.00791117,0.00066210795,0.00042152795,0.00053438597,0.0002116678,0.00006716838,0.0006885154],"genre_scores_gemma":[0.9943915,0.0009708713,0.0022707372,0.00029268,0.00017941024,0.000048701993,0.0017679711,0.000029201814,0.000048944792],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982564,0.0005014828,0.0004768113,0.00033840488,0.00011916188,0.00030773538],"domain_scores_gemma":[0.9979216,0.00007566135,0.00037936473,0.0012923401,0.00021613162,0.00011490503],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022661623,0.00025943381,0.00023926196,0.00011598829,0.0006186229,0.000029844985,0.00067350507,0.00037437596,0.00007975071],"category_scores_gemma":[0.0001069941,0.0002119106,0.00016292812,0.0004346846,0.0007232999,0.000045619105,0.0004566096,0.00020191346,2.3591045e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003678916,0.00004823657,0.04039083,0.000012828172,0.00012023453,2.3327393e-8,0.00017812988,0.000018885688,0.9548487,0.003805731,0.00022235866,0.00031723833],"study_design_scores_gemma":[0.0024500552,0.00051677274,0.52736187,0.000070272356,0.00042888778,0.000113414884,0.0010964165,0.0012064439,0.09290433,0.009795374,0.36275196,0.0013041995],"about_ca_topic_score_codex":0.00008152092,"about_ca_topic_score_gemma":0.00021652866,"teacher_disagreement_score":0.8619444,"about_ca_system_score_codex":0.00002131005,"about_ca_system_score_gemma":0.000039950188,"threshold_uncertainty_score":0.86414635},"labels":[],"label_agreement":null},{"id":"W2073114828","doi":"10.1107/s1744309112037128","title":"High-resolution structure of AKR1a4 in the apo form and its interaction with ligands","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Aldose Reductase and Taurine","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research","keywords":"Aldo-keto reductase; Reductase; Enzyme; Chemistry; Stereochemistry; Oxidoreductase; Biochemistry; Glucuronate; Aldehyde Reductase; Biosynthesis; Resolution (logic)","score_opus":0.010976595002378652,"score_gpt":0.2627533774753247,"score_spread":0.25177678247294605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073114828","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99693763,0.0015646325,0.0003807991,0.0006582193,0.000074895244,0.00025417106,0.000045905374,0.000011086411,0.000072636176],"genre_scores_gemma":[0.99642503,0.0020078684,0.00039010233,0.000091046146,0.000095012074,0.000018745164,0.00095679244,0.000009802962,0.000005579581],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99919724,0.00014080729,0.00024094972,0.00018075846,0.00006511463,0.0001751373],"domain_scores_gemma":[0.9992621,0.000042072712,0.00017782963,0.00037409973,0.00009893278,0.000044986587],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013143399,0.00014928979,0.00013918172,0.00013868068,0.00026608474,0.000017903882,0.00018854554,0.00019856675,0.000010407692],"category_scores_gemma":[0.00003427954,0.000103863866,0.000029767618,0.00031478744,0.000266792,0.000053626245,0.00011549139,0.00018916826,2.2723942e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012354982,0.00004423895,0.029797476,0.000026378426,0.000083250336,8.26783e-8,0.00054296514,0.000023828097,0.9610901,0.007835077,0.000027314925,0.0004057557],"study_design_scores_gemma":[0.0045217024,0.0024807095,0.8744587,0.00014370939,0.0004227835,0.0012232705,0.006803421,0.0012249736,0.042672407,0.010726581,0.053936835,0.0013849624],"about_ca_topic_score_codex":0.000055155542,"about_ca_topic_score_gemma":0.00048641048,"teacher_disagreement_score":0.9184177,"about_ca_system_score_codex":0.000008574946,"about_ca_system_score_gemma":0.000016886004,"threshold_uncertainty_score":0.42354456},"labels":[],"label_agreement":null},{"id":"W2073373065","doi":"10.1107/s1744309106009651","title":"Structure of SAICAR synthase from<i>Thermotoga maritima</i>at 2.2 Å reveals an unusual covalent dimer","year":2006,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"Argonne National Laboratory; National Institute of General Medical Sciences; Biological and Environmental Research; National Institutes of Health; U.S. Department of Energy","keywords":"Thermotoga maritima; ATP synthase; Structural genomics; Dimer; Biochemistry; Chemistry; Covalent bond; Homology (biology); Protein structure; Stereochemistry; Enzyme; Biology; Crystallography; Amino acid; Gene; Escherichia coli","score_opus":0.011047314526076355,"score_gpt":0.2555017515663677,"score_spread":0.24445443704029132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073373065","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99511755,0.00058603525,0.0017381866,0.0002951903,0.00035795578,0.00035982573,0.0010353175,0.0001706326,0.0003393071],"genre_scores_gemma":[0.9921292,0.00020627843,0.004266716,0.0001489819,0.00020468507,0.000021071253,0.0029459472,0.000029387502,0.00004775011],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99766594,0.00056767825,0.00069497834,0.00056377804,0.00019455717,0.0003130871],"domain_scores_gemma":[0.997862,0.00025379457,0.00050365867,0.0009720759,0.0002897541,0.000118763295],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001716559,0.00032611476,0.00039572822,0.00025371538,0.0008794407,0.000067791676,0.0005445581,0.000448209,0.0010504302],"category_scores_gemma":[0.000055150456,0.00029015285,0.00010751871,0.0004866959,0.0009793498,0.00044943963,0.00029344612,0.00028083194,5.4912044e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010510017,0.00004015273,0.03127147,0.000019452957,0.000040009938,2.940721e-7,0.00013104254,0.00008842799,0.96084964,0.0071244957,0.00017282038,0.00015708672],"study_design_scores_gemma":[0.0033532216,0.0011006786,0.6693682,0.00012288707,0.0006793821,0.00021435163,0.00080132746,0.002320095,0.13201463,0.15659398,0.0315071,0.0019241193],"about_ca_topic_score_codex":0.0011242281,"about_ca_topic_score_gemma":0.002746881,"teacher_disagreement_score":0.828835,"about_ca_system_score_codex":0.000057298916,"about_ca_system_score_gemma":0.00003381043,"threshold_uncertainty_score":0.99995506},"labels":[],"label_agreement":null},{"id":"W2073679782","doi":"10.1107/s1744309113030972","title":"Expression, purification, crystallization and preliminary X-ray analysis of the receiver domain of<i>Staphylococcus aureus</i>LytR protein","year":2013,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"","keywords":"Lysis; Crystallization; Effector; Virulence; Staphylococcus aureus; Drop (telecommunication); Crystallography; Bacteria; Transcription (linguistics); Chemistry; Microbiology; Cell biology; Materials science; Biology; Molecular biology; Biochemistry; Gene; Genetics","score_opus":0.010775809807480764,"score_gpt":0.2564317309041599,"score_spread":0.2456559210966791,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073679782","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9870342,0.00083807384,0.0076781115,0.0022263378,0.00006327811,0.0017260223,0.00010828242,0.000065694774,0.0002599874],"genre_scores_gemma":[0.99200386,0.00093425385,0.0061866883,0.00012853235,0.000025166926,0.00016110747,0.00046016078,0.00002329871,0.00007695102],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977446,0.0004712829,0.00088190107,0.00044801368,0.00021353488,0.00024067465],"domain_scores_gemma":[0.99654424,0.00022765448,0.0008442162,0.0013606356,0.00090365356,0.00011957929],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002514063,0.0002818676,0.00054761575,0.00065344595,0.00058917236,0.00003782356,0.00044579813,0.0003752511,0.00013733932],"category_scores_gemma":[0.00023627386,0.000212034,0.00022013979,0.0024060644,0.0017095818,0.00030376384,0.00030153047,0.00032703998,1.045823e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000114146205,0.00007824152,0.07678656,0.00010258946,0.00046843383,9.893294e-8,0.0005355672,0.00006660681,0.91847116,0.0030050124,0.0001413444,0.00023026491],"study_design_scores_gemma":[0.0009883561,0.00031136756,0.97585535,0.0002067816,0.0010081958,0.000009338914,0.0010427032,0.0013440759,0.005996688,0.006191935,0.0066887783,0.00035645475],"about_ca_topic_score_codex":0.00014284055,"about_ca_topic_score_gemma":0.000117821415,"teacher_disagreement_score":0.91247445,"about_ca_system_score_codex":0.00003670601,"about_ca_system_score_gemma":0.00008083146,"threshold_uncertainty_score":0.8646496},"labels":[],"label_agreement":null},{"id":"W2074866412","doi":"10.1107/s1744309109009038","title":"Purification, crystallization and preliminary X-ray analysis of NtdA, a putative pyridoxal phosphate-dependent aminotransferase from<i>Bacillus subtilis</i>","year":2009,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Saskatchewan Health Research Foundation; University of Saskatchewan; Canadian Light Source","keywords":"Bacillus subtilis; Crystallization; Pyridoxal phosphate; Pyridoxal; Enzyme; Chemistry; Resolution (logic); Affinity chromatography; Crystallography; Molecule; Chromatography; Biochemistry; Biology; Organic chemistry; Bacteria","score_opus":0.011794026860501818,"score_gpt":0.2533710985461508,"score_spread":0.241577071685649,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074866412","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9546214,0.0016028688,0.04103534,0.0009240856,0.00020891069,0.00052700524,0.0007098137,0.00018253172,0.00018808195],"genre_scores_gemma":[0.9909849,0.002105085,0.0030417696,0.00023801709,0.000057552,0.000042950192,0.003490247,0.000018148574,0.00002128673],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99743897,0.0004807907,0.0008426186,0.00069933623,0.00023542362,0.00030286046],"domain_scores_gemma":[0.9975998,0.0003389102,0.0005235264,0.0008908622,0.00049260317,0.00015431491],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00032932305,0.0003622194,0.0005420703,0.0006375663,0.00080096384,0.00011625312,0.00044530086,0.00039375786,0.00022052758],"category_scores_gemma":[0.00011634539,0.00033728933,0.00014343836,0.001532825,0.0008153092,0.00064707064,0.00012224515,0.00028484996,2.7390786e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026312942,0.00007573549,0.008318524,0.000018581199,0.00032754926,5.731825e-7,0.001448649,0.0009212784,0.981732,0.005274565,0.000025137535,0.0015942511],"study_design_scores_gemma":[0.00269574,0.001684031,0.90601826,0.00006856453,0.0035814377,0.000039295996,0.0022799892,0.021055473,0.022979978,0.03309333,0.0050998004,0.0014040879],"about_ca_topic_score_codex":0.00032941328,"about_ca_topic_score_gemma":0.00045078484,"teacher_disagreement_score":0.95875204,"about_ca_system_score_codex":0.000045557095,"about_ca_system_score_gemma":0.000047193487,"threshold_uncertainty_score":0.9999079},"labels":[],"label_agreement":null},{"id":"W2076017729","doi":"10.1107/s1744309112037736","title":"Structure of glycerol-3-phosphate dehydrogenase (GPD1) from<i>Saccharomyces cerevisiae</i>at 2.45 Å resolution","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Lipid metabolism and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Ministerio de Economía y Competitividad","keywords":"Glycerol; Dehydrogenase; Glycerol-3-phosphate dehydrogenase; Biochemistry; Dihydroxyacetone phosphate; Saccharomyces cerevisiae; Dihydroxyacetone; Phosphate; Chemistry; Biology; Enzyme; Yeast","score_opus":0.010405180454453843,"score_gpt":0.24916062230806232,"score_spread":0.23875544185360847,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076017729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98884714,0.009130654,0.0006752155,0.00022939622,0.00031179175,0.0002697896,0.0003841097,0.00004542157,0.00010649555],"genre_scores_gemma":[0.9897734,0.003920636,0.0025492194,0.00014577188,0.000316355,0.000017772018,0.0032161225,0.000025672643,0.00003506147],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983046,0.00035025744,0.00050400774,0.00038135247,0.00011827325,0.00034148028],"domain_scores_gemma":[0.998216,0.00007752107,0.00040154843,0.00096284033,0.00017288573,0.00016922435],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001626206,0.0002860478,0.00029614882,0.00015051356,0.0006268726,0.000025718864,0.00045084866,0.00047746045,0.00013581652],"category_scores_gemma":[0.000100673016,0.00025186653,0.00012559247,0.00033884327,0.0005534844,0.000058363024,0.00045495114,0.00017991556,3.837987e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012331537,0.000039981307,0.054142516,0.000021179336,0.00016221675,4.0070812e-8,0.0001672065,0.0000076878405,0.9440844,0.0005479207,0.00012644469,0.00057708815],"study_design_scores_gemma":[0.001686845,0.00032189515,0.16895378,0.000058881255,0.00040639212,0.00007519471,0.00047031636,0.0002650635,0.39429134,0.0015501766,0.4308626,0.0010575355],"about_ca_topic_score_codex":0.00010415109,"about_ca_topic_score_gemma":0.00040051536,"teacher_disagreement_score":0.54979306,"about_ca_system_score_codex":0.000019813124,"about_ca_system_score_gemma":0.00003367692,"threshold_uncertainty_score":0.9999934},"labels":[],"label_agreement":null},{"id":"W2076260889","doi":"10.1107/s1744309110051298","title":"Preliminary joint neutron time-of-flight and X-ray crystallographic study of human ABO(H) blood group A glycosyltransferase","year":2011,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Oak Ridge National Laboratory; Biological and Environmental Research; National Institutes of Health; Michael Smith Health Research BC; Canadian Institutes of Health Research; National Institute of General Medical Sciences; Battelle; U.S. Department of Energy","keywords":"Crystallography; Anomer; Neutron diffraction; ABO blood group system; Glycosidic bond; Chemistry; Molecule; Hydrogen bond; Crystal structure; Stereochemistry; Enzyme; Biology; Biochemistry; Organic chemistry","score_opus":0.022101125933954198,"score_gpt":0.2706560431997495,"score_spread":0.24855491726579532,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076260889","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99742025,0.00077496306,0.0004153658,0.000073309195,0.000039473744,0.00089419296,0.00005531517,0.00003757253,0.00028954717],"genre_scores_gemma":[0.9972518,0.0012317699,0.00074935774,0.000027300823,0.000028466548,0.000089521665,0.0005663485,0.000026574777,0.000028874962],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99789566,0.0005416937,0.0006725637,0.00048941775,0.00014772188,0.0002529722],"domain_scores_gemma":[0.99822915,0.000047867645,0.0003206925,0.0009509676,0.00032062188,0.00013072547],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00031809806,0.0002754293,0.0003533846,0.00047580377,0.0005096134,0.000021075091,0.000419033,0.0003328282,0.000080972466],"category_scores_gemma":[0.000056931764,0.00025819425,0.00010997407,0.0005549996,0.0009042401,0.00003865462,0.00035583484,0.0002606691,6.149564e-8],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026114567,0.00048376553,0.04033809,0.00005471064,0.00026996777,6.7662046e-7,0.00092638884,0.000004910046,0.9565148,0.00096322957,0.000010306207,0.00017203944],"study_design_scores_gemma":[0.005082014,0.015335233,0.9600535,0.00007664622,0.00044682057,0.00010465659,0.0026471994,0.00036576038,0.010294604,0.0024352483,0.002323068,0.00083523395],"about_ca_topic_score_codex":0.00028666804,"about_ca_topic_score_gemma":0.00047178066,"teacher_disagreement_score":0.94622016,"about_ca_system_score_codex":0.00000536768,"about_ca_system_score_gemma":0.00002909333,"threshold_uncertainty_score":0.999987},"labels":[],"label_agreement":null},{"id":"W2076962193","doi":"10.1107/s1744309105040893","title":"Crystallization, preliminary X-ray diffraction and structure solution of MosA, a dihydrodipicolinate synthase from<i>Sinorhizobium meliloti</i>L5-30","year":2005,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Sinorhizobium meliloti; Orthorhombic crystal system; Crystallography; Crystallization; Molecular replacement; ATP synthase; Epimer; X-ray crystallography; Biology; Diffraction; Chemistry; Crystal structure; Enzyme; Stereochemistry; Physics; Biochemistry; Bacteria; Genetics; Optics; Symbiosis","score_opus":0.01055328007124099,"score_gpt":0.24853912276993326,"score_spread":0.23798584269869227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076962193","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98111224,0.0018898761,0.013492102,0.0015328983,0.00047634408,0.0005878796,0.00050109194,0.00020844046,0.00019912343],"genre_scores_gemma":[0.9907432,0.0013350925,0.005884006,0.00022056885,0.00027807252,0.000045695346,0.0014241878,0.00003792848,0.00003125728],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99732953,0.0005094076,0.0008625024,0.000708358,0.00021221266,0.00037797706],"domain_scores_gemma":[0.997375,0.00033007428,0.00073091994,0.0009590761,0.0004333617,0.00017154333],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00025151338,0.0004276327,0.00046370155,0.00038890503,0.001138426,0.00011923669,0.000450968,0.00055907294,0.00059454446],"category_scores_gemma":[0.0001655375,0.00039805876,0.00009999608,0.00059264706,0.0009780246,0.0010025298,0.00033972677,0.00042447518,7.5031727e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018607575,0.000060049602,0.0037232416,0.000045116558,0.00007636476,2.4401524e-7,0.0005621756,0.00035187544,0.99103,0.0026101365,0.00015786733,0.0011968609],"study_design_scores_gemma":[0.00988401,0.0036513014,0.5687492,0.0005767326,0.0023008347,0.00041178864,0.0032008903,0.054416157,0.10213896,0.08373516,0.16598538,0.004949594],"about_ca_topic_score_codex":0.00032527559,"about_ca_topic_score_gemma":0.00066533766,"teacher_disagreement_score":0.88889104,"about_ca_system_score_codex":0.000072273535,"about_ca_system_score_gemma":0.000058271296,"threshold_uncertainty_score":0.9998471},"labels":[],"label_agreement":null},{"id":"W2077722338","doi":"10.1107/s1744309111026273","title":"Crystallization and preliminary X-ray diffraction analysis of prion protein bound to the Fab fragment of the POM1 antibody","year":2011,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Gene isoform; Prion protein; Antibody; Chemistry; Molecular biology; Biochemistry; Biology; Gene; Immunology","score_opus":0.013799381810158053,"score_gpt":0.27170682718938366,"score_spread":0.2579074453792256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077722338","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876837,0.0018107427,0.008976685,0.00050160586,0.00007038907,0.0007871433,0.00008755571,0.000014784818,0.000067386674],"genre_scores_gemma":[0.9958103,0.0026035723,0.0008514289,0.000097708056,0.000025330442,0.00006741876,0.00051708095,0.000011665037,0.000015541074],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986525,0.00037350124,0.0004161881,0.00029922603,0.0001119675,0.00014661298],"domain_scores_gemma":[0.9984037,0.000041874537,0.0004065932,0.00085270515,0.00023182886,0.00006326094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024277405,0.0001680547,0.00020245045,0.00022090181,0.0005387648,0.000023116278,0.0004213634,0.00019482593,0.000027083188],"category_scores_gemma":[0.0001212424,0.00011703704,0.0001338511,0.0009065839,0.00046686782,0.000027770211,0.00042082253,0.00013032522,1.9853884e-8],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016666035,0.000045316126,0.03259817,0.000029080704,0.00042568272,3.3473064e-8,0.0004317435,0.00019194692,0.96342504,0.0015148574,0.0000113703945,0.0011600694],"study_design_scores_gemma":[0.00040540542,0.0005845786,0.9786702,0.00004984348,0.00064325973,0.0000072361995,0.0005569629,0.0017013042,0.004680183,0.0013573006,0.01107092,0.0002728197],"about_ca_topic_score_codex":0.00015582176,"about_ca_topic_score_gemma":0.00028859935,"teacher_disagreement_score":0.9587449,"about_ca_system_score_codex":0.00001092511,"about_ca_system_score_gemma":0.000035880126,"threshold_uncertainty_score":0.47726318},"labels":[],"label_agreement":null},{"id":"W2080372077","doi":"10.1107/s1744309108018757","title":"Crystallization and preliminary X-ray analysis of the inducible lysine decarboxylase from<i>Escherichia coli</i>","year":2008,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto; Ontario Institute for Cancer Research","funders":"Argonne National Laboratory; National Center for Research Resources; Canadian Institutes of Health Research; National Institutes of Health; Biological and Environmental Research; Karolinska Institutet; Canada Research Chairs; University of Chicago; University of Toronto; U.S. Department of Energy","keywords":"Lysine decarboxylase; Escherichia coli; Lysine; Crystallization; Chemistry; Biochemistry; Enzyme; Gene; Amino acid; Organic chemistry","score_opus":0.01636892852467862,"score_gpt":0.24729197473231512,"score_spread":0.2309230462076365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080372077","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916251,0.0008209107,0.0059433077,0.0005150269,0.0002617391,0.00033169184,0.00018398568,0.00009528857,0.00022295391],"genre_scores_gemma":[0.995444,0.0013434684,0.0021916411,0.00022679416,0.000055728924,0.000035175777,0.00065270264,0.000016909242,0.00003355056],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980871,0.0004830072,0.0005693587,0.00046593926,0.0001769049,0.00021769237],"domain_scores_gemma":[0.99781764,0.00028884236,0.00048951944,0.001020209,0.0002905385,0.000093244635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002027084,0.00025258682,0.0003918929,0.00037941997,0.0012089967,0.000045538654,0.00046685626,0.00031439844,0.00018676824],"category_scores_gemma":[0.00012874717,0.00019489822,0.00013614618,0.0020531046,0.0012729272,0.00036066206,0.0003462949,0.00026260916,1.2090361e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007493577,0.000030979463,0.05479068,0.000012013785,0.0002582467,2.1037799e-7,0.00065375323,0.0004673301,0.94198614,0.001581516,0.00006902313,0.00007514064],"study_design_scores_gemma":[0.00082606165,0.00026537458,0.9710483,0.00003126044,0.0013942011,0.00002133687,0.00046171804,0.007641199,0.0067012846,0.004293623,0.006841836,0.0004737834],"about_ca_topic_score_codex":0.0004576243,"about_ca_topic_score_gemma":0.0008028656,"teacher_disagreement_score":0.9352849,"about_ca_system_score_codex":0.000027191942,"about_ca_system_score_gemma":0.000056054338,"threshold_uncertainty_score":0.9298748},"labels":[],"label_agreement":null},{"id":"W2081476974","doi":"10.1107/s1744309110003131","title":"Crystallization and preliminary crystallographic studies of the catalytic subunits of human pyruvate dehydrogenase phosphatase isoforms 1 and 2","year":2010,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Biochemical Acid Research Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Argonne National Laboratory; University of Texas Southwestern Medical Center; University of Toronto; U.S. Department of Energy","keywords":"Crystallization; Pyruvate dehydrogenase complex; Gene isoform; Pyruvate dehydrogenase phosphatase; Protein subunit; Catalysis; Chemistry; Crystallography; Biochemistry; Enzyme; Organic chemistry; Gene","score_opus":0.017817481365649042,"score_gpt":0.3003879615291124,"score_spread":0.28257048016346337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081476974","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99325037,0.0053614285,0.0001205916,0.00052899023,0.00007907253,0.00047437364,0.000115765804,0.000021042879,0.000048358695],"genre_scores_gemma":[0.9909952,0.007862981,0.00039107687,0.000053663684,0.000033373988,0.000040829258,0.0005842852,0.000018817882,0.000019717869],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985344,0.000193426,0.00050853455,0.00039826136,0.00013090998,0.00023448524],"domain_scores_gemma":[0.99810827,0.000116733936,0.0003878861,0.0008255362,0.00046226013,0.00009933601],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00029661952,0.0002574122,0.00030795296,0.00019027597,0.00072550547,0.00002297474,0.00042323087,0.0003231223,0.0000047489825],"category_scores_gemma":[0.00036457178,0.00019030177,0.00008809951,0.0005392521,0.0040252386,0.000039004342,0.0010347116,0.00033158195,1.1105531e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007425255,0.000044425968,0.040343273,0.00013596902,0.00022754117,1.07934e-7,0.00023437706,0.0000024863668,0.9553711,0.0032753074,0.000030412446,0.00026076916],"study_design_scores_gemma":[0.005379926,0.0049314764,0.43685803,0.0004308957,0.0009747512,0.00034136922,0.0048513366,0.0010854852,0.48034704,0.045977283,0.016724365,0.0020980407],"about_ca_topic_score_codex":0.0000690902,"about_ca_topic_score_gemma":0.00065728446,"teacher_disagreement_score":0.47502404,"about_ca_system_score_codex":0.0000062455124,"about_ca_system_score_gemma":0.000037233767,"threshold_uncertainty_score":0.99868524},"labels":[],"label_agreement":null},{"id":"W2082083615","doi":"10.1107/s1744309107033477","title":"High-resolution structures of bacterially expressed soluble human CD59","year":2007,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Complement system in diseases","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Inflazyme (Canada)","funders":"Medical Research Council; European Synchrotron Radiation Facility; Wellcome Trust","keywords":"CD59; Lysis; Crystallization; Glycoprotein; Recombinant DNA; Resolution (logic); Chemistry; Membrane glycoproteins; Ligand (biochemistry); Molecule; Membrane; Biophysics; Crystal structure; Complement system; Biochemistry; Cell biology; Stereochemistry; Biology; Crystallography; Receptor; Immune system; Immunology; Gene","score_opus":0.019231414261196126,"score_gpt":0.28308106555086243,"score_spread":0.2638496512896663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082083615","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99180454,0.0010753932,0.004593147,0.00031171337,0.0008357865,0.0005529301,0.00017474689,0.00019745284,0.00045427633],"genre_scores_gemma":[0.9953215,0.00023526752,0.0010377875,0.00005552582,0.00006675431,0.00003224312,0.003161198,0.000021999016,0.000067737004],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977916,0.00048009152,0.0008681512,0.0004092398,0.0000650237,0.00038590442],"domain_scores_gemma":[0.9976826,0.00032522157,0.00059381366,0.0009920718,0.0003473355,0.00005899361],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00042500332,0.0002864309,0.00040129994,0.0004654591,0.001067353,0.00003684514,0.0006353392,0.00043053823,0.0006082132],"category_scores_gemma":[0.000111374684,0.00027174156,0.0001246614,0.00047378612,0.0011014619,0.00027029947,0.0003755069,0.00029301472,5.83546e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001254078,0.000054023792,0.019893773,0.000036017547,0.00020738196,1.8736145e-7,0.00019313359,0.000016434527,0.9345239,0.044350777,0.000281586,0.0003173859],"study_design_scores_gemma":[0.0053002974,0.0009853202,0.80356866,0.00014085171,0.0004485986,0.00012775417,0.0017611735,0.00006908947,0.02889375,0.0674788,0.08992922,0.0012964942],"about_ca_topic_score_codex":0.00045252356,"about_ca_topic_score_gemma":0.0008214445,"teacher_disagreement_score":0.9056301,"about_ca_system_score_codex":0.000040246712,"about_ca_system_score_gemma":0.00003951527,"threshold_uncertainty_score":0.9999735},"labels":[],"label_agreement":null},{"id":"W2082658151","doi":"10.1107/s1744309109022684","title":"The structure of the first representative of Pfam family PF06475 reveals a new fold with possible involvement in glycolipid metabolism","year":2009,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"National Institute of General Medical Sciences","keywords":"Glycolipid; Context (archaeology); Biochemistry; Lipid metabolism; Protein family; Biology; Metabolism; Chemistry; Gene","score_opus":0.011346858755277469,"score_gpt":0.2559746290651166,"score_spread":0.24462777030983912,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082658151","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942279,0.001911451,0.00097021915,0.0020069927,0.00008635922,0.00060476037,0.000052755368,0.000009633273,0.00012993572],"genre_scores_gemma":[0.99671394,0.0018294712,0.0010490291,0.00021938345,0.00003887537,0.000013600512,0.00009071871,0.00000883833,0.00003614606],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987677,0.00029647944,0.00040992262,0.0002505709,0.000108216394,0.00016716353],"domain_scores_gemma":[0.9984054,0.00008075715,0.00040369548,0.00090116606,0.00016671373,0.00004226414],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015879574,0.00016746974,0.00020586586,0.00009239834,0.00043189892,0.000022279293,0.0005825158,0.00019695515,0.0000054171023],"category_scores_gemma":[0.00007901783,0.0001007026,0.00008201179,0.0005278751,0.000453749,0.000019704104,0.00016963464,0.00015265377,8.013471e-9],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016007748,0.000019241952,0.009919691,0.000008809835,0.00007869724,3.840169e-8,0.00025319651,0.000057264,0.9829548,0.0060119117,0.00009373249,0.0004425171],"study_design_scores_gemma":[0.0026070594,0.0013344402,0.73229206,0.00016913381,0.00020016116,0.00004164918,0.0022747181,0.00012707764,0.13621414,0.08782771,0.03626755,0.0006443016],"about_ca_topic_score_codex":0.00016216426,"about_ca_topic_score_gemma":0.0015791327,"teacher_disagreement_score":0.84674066,"about_ca_system_score_codex":0.000008985877,"about_ca_system_score_gemma":0.000066295404,"threshold_uncertainty_score":0.4106533},"labels":[],"label_agreement":null},{"id":"W2082875236","doi":"10.1107/s1744309106000996","title":"Crystallization and preliminary X-ray diffraction analysis of the magnesium transporter CorA","year":2006,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Magnesium in Health and Disease","field":"Nursing","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; Ontario Institute for Cancer Research","funders":"Brookhaven National Laboratory; Argonne National Laboratory; Canada Research Chairs; U.S. Department of Energy","keywords":"Crystallization; Magnesium; Materials science; X-ray; Diffraction; Transporter; X-ray crystallography; Crystallography; Metallurgy; Chemistry; Physics; Optics; Biochemistry; Gene; Organic chemistry","score_opus":0.010703822444897482,"score_gpt":0.2643800126925276,"score_spread":0.2536761902476301,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082875236","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9903594,0.001031119,0.003418936,0.0035069624,0.00039250526,0.00065202615,0.000168429,0.00012150486,0.00034906657],"genre_scores_gemma":[0.9976488,0.00016257608,0.00047552152,0.0002943127,0.000067527304,0.000054537082,0.0012373433,0.000018866729,0.00004056242],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99804807,0.00046125645,0.0006764155,0.00039678693,0.00016082633,0.00025664296],"domain_scores_gemma":[0.9980538,0.00022871511,0.000504232,0.0008395414,0.00027075608,0.00010294399],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001951676,0.000247674,0.00032607155,0.0005543479,0.0010175983,0.00005384743,0.0003232163,0.00030052566,0.00009241622],"category_scores_gemma":[0.00006489515,0.00020069187,0.00016193686,0.0018217657,0.00084249943,0.00032605955,0.00011158987,0.00025619802,4.4766963e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00065514253,0.00019134647,0.71275294,0.00034331973,0.00018121894,3.339614e-7,0.00054286857,0.0011715284,0.2762715,0.0063206744,0.00009642911,0.0014727127],"study_design_scores_gemma":[0.0004910455,0.00017632288,0.9789332,0.0000092374785,0.0012329255,0.000009360812,0.00016987362,0.012172543,0.000035148198,0.0033016638,0.0032504944,0.00021818625],"about_ca_topic_score_codex":0.00072461297,"about_ca_topic_score_gemma":0.0013145345,"teacher_disagreement_score":0.27623636,"about_ca_system_score_codex":0.000032892105,"about_ca_system_score_gemma":0.000027990034,"threshold_uncertainty_score":0.8183977},"labels":[],"label_agreement":null},{"id":"W2084425241","doi":"10.1107/s174430911103363x","title":"Crystallographic analysis of the C-terminal domain of the<i>Escherichia coli</i>lipoprotein BamC","year":2011,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Canadian Institutes of Health Research; Michael Smith Health Research BC","keywords":"Crystallography; Chemistry; Biophysics; Antiparallel (mathematics); Protein structure; Biology; Biochemistry","score_opus":0.012129146343015573,"score_gpt":0.23461952437919598,"score_spread":0.2224903780361804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084425241","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99748635,0.00036754715,0.000763574,0.00036405594,0.00018535867,0.00037900926,0.00011766861,0.00001593013,0.00032051146],"genre_scores_gemma":[0.99757403,0.0007087819,0.0013533741,0.000111411246,0.00002603401,0.000031652246,0.00015956617,0.000013109335,0.000022067235],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984669,0.00040799732,0.0005138694,0.0003163931,0.00009873366,0.00019606821],"domain_scores_gemma":[0.99772364,0.000026484671,0.000548835,0.0014249446,0.00023061184,0.000045467405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020143494,0.00020285665,0.00028843796,0.0002383735,0.00041330644,0.000011558597,0.001004361,0.00045691317,0.000037215166],"category_scores_gemma":[0.000057934172,0.00013684943,0.00031332215,0.0016982792,0.001847756,0.000010766553,0.0006673767,0.00022802918,1.45657815e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059878785,0.00004494501,0.045856763,0.000013434884,0.0005406069,4.632301e-8,0.00013849078,0.000008146941,0.94961953,0.0035476133,0.000011352121,0.00015921747],"study_design_scores_gemma":[0.0006269641,0.00043638962,0.9343671,0.000027503302,0.00088303443,0.000027093469,0.00036281237,0.00017855906,0.037226044,0.0068155946,0.018664138,0.000384775],"about_ca_topic_score_codex":0.00018965316,"about_ca_topic_score_gemma":0.0015238902,"teacher_disagreement_score":0.91239345,"about_ca_system_score_codex":0.000006805737,"about_ca_system_score_gemma":0.00005375648,"threshold_uncertainty_score":0.6808134},"labels":[],"label_agreement":null},{"id":"W2088231991","doi":"10.1107/s1744309107046374","title":"Expression, purification and preliminary X-ray analysis of the C-terminal domain of an arginine repressor protein from<i>Mycobacterium tuberculosis</i>","year":2007,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Cancer Research and Treatments","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Lawrence Berkeley National Laboratory; Alberta Heritage Foundation for Medical Research; Fondation pour la Recherche Médicale; U.S. Department of Energy; National Institutes of Health; National Science Foundation","keywords":"Repressor; Arginine; Mycobacterium tuberculosis; Open reading frame; Chemistry; Biochemistry; Molecular biology; Biology; Gene; Gene expression; Peptide sequence; Tuberculosis; Amino acid; Medicine","score_opus":0.009200059855100565,"score_gpt":0.2795420178074593,"score_spread":0.2703419579523587,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088231991","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966661,0.0007264688,0.0016641881,0.00021851237,0.00003289388,0.0003972088,0.00023357419,0.000011080097,0.000049999762],"genre_scores_gemma":[0.99546707,0.00057108613,0.0020519777,0.000025485915,0.00003031846,0.00004576529,0.0017866539,0.000009218818,0.000012421153],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99875426,0.00029176107,0.0003835986,0.00032166587,0.00010132985,0.00014739178],"domain_scores_gemma":[0.99841094,0.00005653279,0.00032596238,0.0009339619,0.00019590139,0.00007671028],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002350644,0.00014084755,0.00020119967,0.00020167968,0.00029116555,0.000016561973,0.00031058304,0.00020047426,0.000016211634],"category_scores_gemma":[0.000060101193,0.00010785023,0.00009445983,0.0005607884,0.0006390338,0.00002955697,0.00025293618,0.000121679215,8.585633e-9],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030684832,0.000064645,0.045814253,0.000013994948,0.00036694476,1.5905594e-7,0.0001686945,0.000015268875,0.9525735,0.00018818841,0.0000057687917,0.00048173923],"study_design_scores_gemma":[0.00079877896,0.00057033135,0.9313361,0.00003497508,0.00039514745,0.000014997628,0.00039389305,0.0002743772,0.061648082,0.0014536681,0.0028749625,0.00020466038],"about_ca_topic_score_codex":0.0002813816,"about_ca_topic_score_gemma":0.0010153726,"teacher_disagreement_score":0.8909254,"about_ca_system_score_codex":0.000009660911,"about_ca_system_score_gemma":0.0000278202,"threshold_uncertainty_score":0.4398005},"labels":[],"label_agreement":null},{"id":"W2089480950","doi":"10.1107/s174430910801141x","title":"Structure of a<i>Trypanosoma brucei</i>α/β-hydrolase fold protein with unknown function","year":2008,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Trypanosoma species research and implications","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences","keywords":"Structural genomics; Trypanosoma brucei; Hydrolase; Structural similarity; Protein structure; Biology; Protein family; Peptide sequence; Function (biology); Sequence alignment; Biochemistry; Computational biology; Genetics; Enzyme; Gene","score_opus":0.017137329565922257,"score_gpt":0.26891140504954075,"score_spread":0.2517740754836185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089480950","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929151,0.000530314,0.0024526545,0.0018978303,0.000054194265,0.0009778013,0.00013537434,0.00016121505,0.0008755248],"genre_scores_gemma":[0.9945038,0.000901352,0.0030088015,0.00016380075,0.00007507378,0.00006801711,0.0010574266,0.000030248657,0.00019147643],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983237,0.00019868137,0.00050424214,0.0004210039,0.00023264004,0.00031976344],"domain_scores_gemma":[0.99762166,0.00011272395,0.00030904182,0.0011330058,0.00060139975,0.00022219439],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000019334517,0.00027677626,0.0003840459,0.00045806673,0.0009447275,0.000024666548,0.00030223824,0.00032273817,0.00016224025],"category_scores_gemma":[0.000103093495,0.0002202059,0.00010959825,0.0012097654,0.0014905925,0.00031786214,0.00016121125,0.0004986708,2.6472364e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037672778,0.00008355223,0.017298061,0.000058030782,0.00020132601,0.000001274372,0.00012517252,0.00000824445,0.9728634,0.008557902,0.0001087837,0.00031755125],"study_design_scores_gemma":[0.0033691272,0.002658952,0.9032808,0.00012658171,0.00026797244,0.0014665888,0.00029299405,0.00047986637,0.010558147,0.006050977,0.07087119,0.00057683187],"about_ca_topic_score_codex":0.00008631946,"about_ca_topic_score_gemma":0.00027740473,"teacher_disagreement_score":0.96230525,"about_ca_system_score_codex":0.000042229574,"about_ca_system_score_gemma":0.00017303212,"threshold_uncertainty_score":0.8979736},"labels":[],"label_agreement":null},{"id":"W2090701976","doi":"10.1107/s1744309107017113","title":"Cloning, expression, purification, crystallization and preliminary X-ray analysis of<i>Thermus aquaticus</i>succinyl-CoA synthetase","year":2007,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Plant biochemistry and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Alberta","funders":"Alberta Heritage Foundation for Medical Research; Fondation pour la Recherche Médicale","keywords":"Thermus aquaticus; Thermus; Crystallization; Proteolysis; Protease; Enzyme; Thermophile; Cloning (programming); Protein subunit; Biochemistry; Chemistry; Biology; Molecular biology; Gene; Organic chemistry","score_opus":0.009698777353065846,"score_gpt":0.2577811506422469,"score_spread":0.24808237328918104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090701976","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9592902,0.0017623806,0.037545968,0.00036836226,0.000079772035,0.00035849607,0.00023608282,0.000059887658,0.0002988693],"genre_scores_gemma":[0.9901412,0.0028375494,0.0029988457,0.00010897253,0.0000691175,0.00002386176,0.0037392683,0.000020678008,0.00006050961],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99804807,0.00027540323,0.0006867773,0.00056669157,0.00013765461,0.0002853874],"domain_scores_gemma":[0.99782604,0.0002318201,0.00052872795,0.00094949285,0.00031298908,0.00015092167],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00056242524,0.0003003853,0.0003579823,0.00045548615,0.00060576416,0.000045101307,0.0004142153,0.00050138,0.000038623697],"category_scores_gemma":[0.000287735,0.00027825718,0.00014555831,0.0010040116,0.00072486344,0.000040427,0.00025801576,0.00018744872,7.2780914e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024960324,0.000063399646,0.020891046,0.00003467979,0.0004992461,3.9814267e-7,0.0001649003,0.00011402422,0.9767682,0.000640741,0.000057184163,0.00051660335],"study_design_scores_gemma":[0.0022415768,0.0013716226,0.5460306,0.00018402113,0.00362559,0.0001929047,0.0023302163,0.006854718,0.3366556,0.0019660243,0.096314095,0.0022330768],"about_ca_topic_score_codex":0.000041389834,"about_ca_topic_score_gemma":0.00021175359,"teacher_disagreement_score":0.6401126,"about_ca_system_score_codex":0.000014483005,"about_ca_system_score_gemma":0.000038244892,"threshold_uncertainty_score":0.999967},"labels":[],"label_agreement":null},{"id":"W2091115575","doi":"10.1107/s1744309107065931","title":"Structure of HsaD, a steroid-degrading hydrolase, from<i>Mycobacterium tuberculosis</i>","year":2007,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Diamond Light Source","keywords":"Mycobacterium tuberculosis; Steroid; Mycobacterium; Hydrolase; Microbiology; Tuberculosis; Chemistry; Biology; Enzyme; Biochemistry; Medicine; Hormone; Pathology","score_opus":0.010308884576061928,"score_gpt":0.2525625743365668,"score_spread":0.24225368976050488,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091115575","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9889266,0.00074431114,0.007977256,0.00031231856,0.0007158349,0.0002923681,0.00037790334,0.00017155478,0.00048186368],"genre_scores_gemma":[0.99376106,0.00044649237,0.0043174843,0.00019408924,0.00018965158,0.000007940467,0.0010432691,0.000025854259,0.000014159235],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9979688,0.00026558177,0.0007365238,0.0004898521,0.00017701171,0.0003622468],"domain_scores_gemma":[0.9977856,0.00036083636,0.0004899001,0.00094770256,0.0002738007,0.00014215632],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002819155,0.00031297785,0.00037561738,0.0003641632,0.00068370363,0.00007302497,0.0005156112,0.00044280328,0.0003787774],"category_scores_gemma":[0.00008812029,0.0002780853,0.00011345297,0.00070722785,0.000744731,0.0004794746,0.00025647593,0.00036854704,3.9253783e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009850521,0.000018076475,0.020578712,0.000023413693,0.000063416264,3.3314097e-7,0.00037408213,0.000014242111,0.975458,0.002813677,0.000049395334,0.00050810544],"study_design_scores_gemma":[0.0044190427,0.001288244,0.47492093,0.00024238077,0.0008680288,0.00035034175,0.0029243142,0.001595098,0.34346357,0.10092703,0.06641235,0.0025886619],"about_ca_topic_score_codex":0.00033647192,"about_ca_topic_score_gemma":0.0014949652,"teacher_disagreement_score":0.6319945,"about_ca_system_score_codex":0.000043044685,"about_ca_system_score_gemma":0.000031014715,"threshold_uncertainty_score":0.99996716},"labels":[],"label_agreement":null},{"id":"W2091866698","doi":"10.1107/s1744309109003595","title":"Preliminary crystallographic study of two cuticle-degrading proteases from the nematophagous fungi<i>Lecanicillium psalliotae</i>and<i>Paecilomyces lilacinus</i>","year":2009,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Yunnan Provincial Science and Technology Department; National Natural Science Foundation of China; National Key Research and Development Program of China; McMaster University","keywords":"Paecilomyces; Proteases; Cuticle (hair); Biology; Microbiology; Botany; Enzyme; Biochemistry; Anatomy","score_opus":0.013161242519911416,"score_gpt":0.27074144281666723,"score_spread":0.2575802002967558,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091866698","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9925884,0.0034357342,0.00106378,0.0015675215,0.00014753145,0.0009963585,0.00006294172,0.000074131625,0.00006359619],"genre_scores_gemma":[0.9945418,0.0035688996,0.00047089226,0.00040766216,0.00017190629,0.000097613934,0.00069794763,0.000021109605,0.000022144857],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9979829,0.00053374603,0.0005504793,0.000545078,0.00013808678,0.00024970007],"domain_scores_gemma":[0.9981615,0.00011703128,0.00039755326,0.0009771622,0.00024851356,0.00009825329],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025408991,0.00029449494,0.00027540818,0.00016512978,0.0008027082,0.000077960416,0.00047983578,0.0002147588,0.000015688167],"category_scores_gemma":[0.000095687705,0.00023779046,0.00008771069,0.0005947597,0.00049468526,0.00005734705,0.00025091652,0.00026545534,5.6541335e-8],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020609389,0.00020680638,0.0618844,0.0000126082705,0.00017857329,4.3450137e-7,0.0007309497,0.00004195157,0.93367803,0.0009948099,0.000116440286,0.0019488767],"study_design_scores_gemma":[0.0046360777,0.0053534335,0.9381344,0.00010025368,0.00064010266,0.00028442568,0.0051439097,0.0011827047,0.008017025,0.011135536,0.02405543,0.0013167049],"about_ca_topic_score_codex":0.0001441161,"about_ca_topic_score_gemma":0.00033688283,"teacher_disagreement_score":0.925661,"about_ca_system_score_codex":0.000010030189,"about_ca_system_score_gemma":0.000032418382,"threshold_uncertainty_score":0.9696814},"labels":[],"label_agreement":null},{"id":"W2094172169","doi":"10.1107/s174430911003246x","title":"Structural analysis of<i>Bacillus pumilus</i>phenolic acid decarboxylase, a lipocalin-fold enzyme","year":2010,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Argonne National Laboratory; Basic Energy Sciences; National Research Council Canada; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Office of Science; University of Saskatchewan; Canadian Light Source; Eli Lilly and Company; U.S. Department of Energy","keywords":"Bacillus pumilus; Lipocalin; Chemistry; Enzyme; Biochemistry; Amino acid; Decarboxylation; Stereochemistry; Residue (chemistry); Protein structure; Biology; Bacteria","score_opus":0.010111814477029748,"score_gpt":0.25893287353739647,"score_spread":0.24882105906036672,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094172169","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99577475,0.0012941981,0.0013181603,0.0006607243,0.0001809028,0.00022101577,0.00022558821,0.000059288403,0.0002653789],"genre_scores_gemma":[0.99389905,0.001029771,0.0014939914,0.00030280167,0.00013971762,0.000034216904,0.0030536696,0.000020089892,0.000026720456],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99830747,0.0001402968,0.0005550176,0.00055766676,0.00013188564,0.00030766765],"domain_scores_gemma":[0.9979927,0.000079188016,0.00032858754,0.0010409962,0.00038601772,0.0001725094],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00015826226,0.00031290232,0.00038692262,0.00033338516,0.0004167034,0.000044819753,0.0006871191,0.00087990914,0.00008782432],"category_scores_gemma":[0.00023095512,0.00027161714,0.000249802,0.0013585951,0.0012205567,0.000026782052,0.0004388727,0.0005624338,1.12954716e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000074183896,0.00003085725,0.012350807,0.000022245164,0.0006104576,1.1116971e-7,0.000053459753,0.000014572421,0.9850079,0.0012224776,0.000070526905,0.00054240297],"study_design_scores_gemma":[0.0033980086,0.0013394777,0.10341135,0.00005295034,0.0037392578,0.00019408451,0.0006003943,0.012146556,0.7248607,0.014657895,0.13251251,0.0030867853],"about_ca_topic_score_codex":0.00007754244,"about_ca_topic_score_gemma":0.0007244236,"teacher_disagreement_score":0.26014715,"about_ca_system_score_codex":0.000008399716,"about_ca_system_score_gemma":0.000053332136,"threshold_uncertainty_score":0.9999736},"labels":[],"label_agreement":null},{"id":"W2094483672","doi":"10.1107/s1744309105007657","title":"MraZ from<i>Escherichia coli</i>: cloning, purification, crystallization and preliminary X-ray analysis","year":2005,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Escherichia coli; Cloning (programming); Gene; Biology; Function (biology); Molecular cloning; Gene cluster; Bacteria; Cell division; Genetics; Molecular biology; Biochemistry; Cell; Peptide sequence","score_opus":0.008508270993130854,"score_gpt":0.24438697072783047,"score_spread":0.2358786997346996,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094483672","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9757026,0.002509495,0.018097997,0.0027574326,0.0001191358,0.00039134943,0.00015568653,0.000099903606,0.00016639092],"genre_scores_gemma":[0.97652394,0.0076148664,0.010568011,0.00040183822,0.00021138474,0.00006966813,0.00450503,0.000027492764,0.00007777014],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981413,0.00028696292,0.0005196151,0.0006727235,0.00009463615,0.000284748],"domain_scores_gemma":[0.99821347,0.000059570884,0.00033132665,0.0010076013,0.00025450916,0.00013351561],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00018760526,0.00031010073,0.00030190515,0.00033424728,0.0007163961,0.00010624499,0.00045588956,0.00068462227,0.000063358784],"category_scores_gemma":[0.000085115746,0.0003081234,0.0001139278,0.00083691,0.00072747166,0.000041510168,0.0003997573,0.00025789934,3.0584795e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009353113,0.00004758153,0.016841205,0.000007826758,0.00047418967,1.088308e-7,0.00012761887,0.00018494594,0.97952604,0.0012883677,0.00011556084,0.0012930393],"study_design_scores_gemma":[0.001772769,0.0010500354,0.43851718,0.000024609159,0.0012490699,0.000025993453,0.00048600152,0.011450433,0.010860889,0.003291135,0.5299467,0.0013252163],"about_ca_topic_score_codex":0.00010394642,"about_ca_topic_score_gemma":0.00077003037,"teacher_disagreement_score":0.9686651,"about_ca_system_score_codex":0.000018613382,"about_ca_system_score_gemma":0.000042652562,"threshold_uncertainty_score":0.99993706},"labels":[],"label_agreement":null},{"id":"W2096988896","doi":"10.1107/s1744309104025837","title":"Purification and crystallization of a trimodular complex comprising the type II cohesin–dockerin interaction from the cellulosome of<i>Clostridium thermocellum</i>","year":2004,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Ontario Innovation Trust","keywords":"Clostridium thermocellum; Cellulosome; Cohesin; Thermophile; Chemistry; Biochemistry; Cellulase; Cellulose; DNA; Enzyme; Chromatin","score_opus":0.024413825413496147,"score_gpt":0.26271229686290287,"score_spread":0.23829847144940672,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096988896","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98211366,0.0010482835,0.012841656,0.002746729,0.00035563056,0.00055565144,0.00011374607,0.000076370205,0.00014828263],"genre_scores_gemma":[0.99565923,0.001379592,0.0019212449,0.00014854062,0.0000916662,0.000021104837,0.00075412454,0.00001962487,0.0000048663974],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99818426,0.00042698122,0.0006666802,0.00035796652,0.00017551461,0.00018859435],"domain_scores_gemma":[0.99761415,0.00034077023,0.0007294966,0.00085797533,0.00040445005,0.000053175616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033062475,0.0002412756,0.00029564433,0.000140915,0.0012488115,0.000072440365,0.00051817653,0.00023447421,0.00010866653],"category_scores_gemma":[0.000121688914,0.00016536163,0.000070930524,0.00071633427,0.0012740359,0.0003545809,0.00027782042,0.00028988632,2.1202933e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010837138,0.00003986184,0.0011492013,0.000023057744,0.00005688252,6.952656e-8,0.001205746,0.00054342905,0.98673093,0.009844287,0.00002351138,0.00027465343],"study_design_scores_gemma":[0.007869599,0.00312279,0.3527489,0.0006046995,0.0014337049,0.00027653485,0.010931219,0.005437538,0.32637614,0.24129535,0.047749694,0.0021538245],"about_ca_topic_score_codex":0.00076747243,"about_ca_topic_score_gemma":0.0003710201,"teacher_disagreement_score":0.6603548,"about_ca_system_score_codex":0.00004962809,"about_ca_system_score_gemma":0.000074972624,"threshold_uncertainty_score":0.9604975},"labels":[],"label_agreement":null},{"id":"W2108480069","doi":"10.1107/s1744309109052543","title":"A conserved mechanism of autoinhibition for the AMPK kinase domain: ATP-binding site and catalytic loop refolding as a means of regulation","year":2010,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Metabolism, Diabetes, and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; University of Toronto","funders":"","keywords":"AMPK; Protein kinase A; Cell biology; Binding site; Chemistry; Protein subunit; Biochemistry; Active site; Protein structure; Plasma protein binding; Kinase; Biophysics; Biology; Enzyme","score_opus":0.011925692528274445,"score_gpt":0.2621194842246271,"score_spread":0.25019379169635264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108480069","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9859232,0.006133768,0.006658025,0.00034492143,0.00018891526,0.0004982021,0.00019335684,0.000019583415,0.000040069375],"genre_scores_gemma":[0.98743826,0.009323476,0.0017923517,0.000100390964,0.00006373808,0.00007059766,0.0011828007,0.000015949801,0.000012431932],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99895364,0.00015867891,0.00038493934,0.00027398672,0.000073298674,0.00015547799],"domain_scores_gemma":[0.9984822,0.00018525746,0.00038006488,0.00060754485,0.0002919327,0.000052977015],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003807986,0.00016041742,0.00020689737,0.00014025858,0.00054916216,0.000024392813,0.00021661619,0.00027594913,0.000018493625],"category_scores_gemma":[0.0002022284,0.00013276016,0.00009227885,0.00025520442,0.00067027676,0.000033864395,0.00014528469,0.00017446694,3.296431e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008164015,0.000015579615,0.0007552074,0.000040763858,0.000085307205,2.076348e-8,0.00027702804,0.0000076900105,0.97363657,0.02332525,0.000020963505,0.0017539643],"study_design_scores_gemma":[0.010736659,0.0022632347,0.05554144,0.0003447834,0.0016399083,0.00027571173,0.0060995785,0.013988829,0.35100165,0.16794094,0.3878194,0.0023478544],"about_ca_topic_score_codex":0.0000851299,"about_ca_topic_score_gemma":0.00065347285,"teacher_disagreement_score":0.62263495,"about_ca_system_score_codex":0.0000067389647,"about_ca_system_score_gemma":0.000045267916,"threshold_uncertainty_score":0.5413802},"labels":[],"label_agreement":null},{"id":"W2115451142","doi":"10.1107/s1744309107013097","title":"Crystallization, preliminary X-ray diffraction and structure analysis of<i>Thermotoga maritima</i>mannitol dehydrogenase","year":2007,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Canadian Light Source (Canada); University of Saskatchewan","funders":"","keywords":"Thermotoga maritima; Crystallization; D-mannitol; X-ray crystallography; Materials science; Crystallography; Mannitol; Diffraction; Chemistry; Physics; Optics; Biochemistry; Organic chemistry","score_opus":0.009990603029599152,"score_gpt":0.2635123591756668,"score_spread":0.25352175614606764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115451142","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96168315,0.00090375746,0.03574419,0.0002599132,0.0003077213,0.00043194788,0.00024524494,0.00016985676,0.00025419894],"genre_scores_gemma":[0.99354917,0.00076736085,0.0038722502,0.00016257066,0.00009601184,0.000019368366,0.001481452,0.000027123075,0.00002468983],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977198,0.0003311599,0.0008120741,0.00058602105,0.00018857443,0.00036231705],"domain_scores_gemma":[0.9974955,0.00042406618,0.0006055152,0.0008779594,0.00042998095,0.00016702143],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004622295,0.0003489024,0.00047982985,0.0010038948,0.0009687779,0.000088515044,0.00038581807,0.0004833173,0.0003049243],"category_scores_gemma":[0.0001355473,0.00032118568,0.00014225175,0.0018869308,0.00095314556,0.00056385197,0.00025252954,0.00033547106,1.4473366e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019042722,0.000035873512,0.031479403,0.000043926648,0.00034161872,6.167331e-7,0.0005055199,0.00034097087,0.96175766,0.0045447107,0.000031436637,0.0007278294],"study_design_scores_gemma":[0.0013560479,0.00066465617,0.952154,0.00005152714,0.002327814,0.00012969488,0.0013394422,0.008040466,0.0069033476,0.011577751,0.014459924,0.0009953539],"about_ca_topic_score_codex":0.00017372279,"about_ca_topic_score_gemma":0.0011076563,"teacher_disagreement_score":0.9548543,"about_ca_system_score_codex":0.0000446076,"about_ca_system_score_gemma":0.00003498524,"threshold_uncertainty_score":0.999924},"labels":[],"label_agreement":null},{"id":"W2116210091","doi":"10.1107/s1744309109032321","title":"Purification and crystallization of a putative transcriptional regulator of the benzoate oxidation pathway in<i>Burkholderia xenovorans</i>LB400","year":2009,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Burkholderia; Transcriptional regulation; Escherichia coli; Biology; Regulator; Tetramer; DNA; Enzyme; Biochemistry; Genetics; Gene; Transcription factor; Bacteria","score_opus":0.010249495607165305,"score_gpt":0.23985917136120463,"score_spread":0.22960967575403932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2116210091","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940732,0.0006916124,0.0028227032,0.0016986226,0.00009254627,0.0004421729,0.00009825473,0.000016294034,0.000064589265],"genre_scores_gemma":[0.99582684,0.0018267044,0.0013615305,0.00009055832,0.00003088647,0.000020105417,0.0008202579,0.000010626653,0.000012461104],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99862796,0.00026629792,0.00053447235,0.00032664355,0.00009003707,0.00015459022],"domain_scores_gemma":[0.99872965,0.00002927842,0.00039863872,0.0005539775,0.00024811682,0.000040342627],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020217021,0.00018237138,0.00021831524,0.00019956773,0.00022158293,0.00001915338,0.000317393,0.00041098474,0.00000665926],"category_scores_gemma":[0.00006933477,0.00015511364,0.000071482915,0.0005457759,0.00070540106,0.000031199274,0.00010304906,0.0001592018,1.1883615e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000826494,0.000048868027,0.004492237,0.000019346748,0.000034117264,2.7059654e-8,0.00018538466,0.000040968913,0.9821913,0.011634333,0.000003751145,0.0012669938],"study_design_scores_gemma":[0.0018644681,0.0009754456,0.6710553,0.00007181625,0.00008160828,0.000046018664,0.00046302634,0.0009819552,0.28562927,0.025616204,0.012710821,0.0005040775],"about_ca_topic_score_codex":0.000031178137,"about_ca_topic_score_gemma":0.00017931881,"teacher_disagreement_score":0.69656205,"about_ca_system_score_codex":0.000011899135,"about_ca_system_score_gemma":0.000054386743,"threshold_uncertainty_score":0.63253504},"labels":[],"label_agreement":null},{"id":"W2116825459","doi":"10.1107/s1744309111052109","title":"Expression, purification, crystallization and preliminary X-ray analysis of<i>Pseudomonas aeruginosa</i>PelD","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Hospital for Sick Children; Brookhaven National Laboratory; Canadian Institutes of Health Research; Alliance for Cancer Gene Therapy; Sick Kids Foundation; U.S. Department of Energy; National Institutes of Health; National Science Foundation","keywords":"Pseudomonas aeruginosa; Crystallization; Microbiology; Chemistry; Materials science; Crystallography; Biology; Bacteria; Genetics; Organic chemistry","score_opus":0.012176658535317282,"score_gpt":0.25698023423588606,"score_spread":0.2448035757005688,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2116825459","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9887217,0.0024175148,0.0076147877,0.00042987685,0.00017633336,0.0003198755,0.0001010751,0.000046710793,0.00017212082],"genre_scores_gemma":[0.98877555,0.0034120085,0.0045436407,0.00012787478,0.00012110193,0.000028985169,0.0029413232,0.000021351534,0.000028183087],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99834865,0.00034231943,0.0005261738,0.0003939469,0.00010052322,0.00028836084],"domain_scores_gemma":[0.99826187,0.00008953548,0.0003989255,0.000819865,0.0002770707,0.00015275128],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029244888,0.000254841,0.00031583503,0.0004111402,0.00055682077,0.000044605968,0.00025926527,0.00040797665,0.000032760017],"category_scores_gemma":[0.00012020437,0.00024005154,0.00012295597,0.0008710323,0.00061321247,0.000072419534,0.00030184948,0.00015793474,7.213996e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008472241,0.000048923113,0.06951092,0.000018926394,0.00033315053,3.9924746e-8,0.0002446218,0.000046866997,0.92712915,0.002133361,0.00007360151,0.0003757408],"study_design_scores_gemma":[0.0011722244,0.00063687866,0.876017,0.000053665135,0.0015232925,0.00006437561,0.0010098013,0.0015060069,0.028604498,0.0005415026,0.08782091,0.0010498881],"about_ca_topic_score_codex":0.000039331,"about_ca_topic_score_gemma":0.0000659786,"teacher_disagreement_score":0.89852464,"about_ca_system_score_codex":0.000010708323,"about_ca_system_score_gemma":0.000027099028,"threshold_uncertainty_score":0.97890174},"labels":[],"label_agreement":null},{"id":"W2117547761","doi":"10.1107/s1744309109027754","title":"Expression, purification and preliminary X-ray crystallographic analysis of UDP-galactopyranose mutase from<i>Deinococcus radiodurans</i>","year":2009,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Deinococcus radiodurans; Crystallography; Mutase; X-ray; Chemistry; Biology; Biochemistry; Enzyme; Physics; DNA; Nuclear physics","score_opus":0.010455820966853884,"score_gpt":0.2530808489555711,"score_spread":0.2426250279887172,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117547761","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98337376,0.0023428416,0.011990391,0.0008854264,0.00020663235,0.00046391186,0.00034775917,0.00019470997,0.00019459239],"genre_scores_gemma":[0.991333,0.0022232379,0.004061504,0.00021889045,0.00006689778,0.000040963667,0.00202646,0.00001627539,0.000012787528],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9975265,0.0005117193,0.00080017955,0.00068550464,0.00017358027,0.0003024923],"domain_scores_gemma":[0.9973859,0.0003444884,0.00058767514,0.0012021086,0.0003132429,0.00016658078],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00031106966,0.00035697044,0.00056094525,0.0009090109,0.000826117,0.00009925085,0.00049981487,0.00044724095,0.00023122547],"category_scores_gemma":[0.00010746477,0.00031686615,0.00018579679,0.0017474242,0.0009275301,0.00056199526,0.0001358817,0.00031538267,1.5677499e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018511483,0.00005975432,0.014693885,0.000015430585,0.00020670056,4.5014457e-7,0.0005801094,0.00014552196,0.98080224,0.0023480621,0.00006629121,0.0008964355],"study_design_scores_gemma":[0.0015101349,0.0008553994,0.95181644,0.000065813656,0.0020443338,0.000028414188,0.0007669813,0.003613472,0.0121097015,0.01922334,0.007113297,0.00085265643],"about_ca_topic_score_codex":0.0001587702,"about_ca_topic_score_gemma":0.00017902031,"teacher_disagreement_score":0.96869254,"about_ca_system_score_codex":0.000023739995,"about_ca_system_score_gemma":0.000032102653,"threshold_uncertainty_score":0.99992836},"labels":[],"label_agreement":null},{"id":"W2120969189","doi":"10.1107/s1744309109036513","title":"Crystallization and preliminary X-ray diffraction analysis of the middle domain of Paip1","year":2009,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research","keywords":"EIF4G; Poly(A)-binding protein; Crystallization; Crystallography; Biophysics; Activator (genetics); Messenger RNA; Translation (biology); Chemistry; Cell biology; Biology; Molecular biology; Biochemistry; Receptor; Gene","score_opus":0.014688986538064074,"score_gpt":0.27176829302974775,"score_spread":0.2570793064916837,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120969189","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9883253,0.00076799304,0.009712104,0.0007267268,0.000035849713,0.0002809643,0.00003631779,0.000013911702,0.00010082781],"genre_scores_gemma":[0.99676377,0.0016064488,0.00090065954,0.000111794085,0.000022015645,0.0000124896615,0.00053433765,0.0000075029807,0.00004098222],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99860346,0.00048070628,0.0003894311,0.00026303466,0.00010888912,0.00015446336],"domain_scores_gemma":[0.9985918,0.00009413977,0.00033351537,0.00068492565,0.00023678994,0.000058846326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034156558,0.00014617621,0.00022493693,0.00029107832,0.00039076732,0.0000152392295,0.00030770464,0.00022510362,0.000010197885],"category_scores_gemma":[0.00016806152,0.00011526242,0.00012737604,0.000960007,0.0005390363,0.000026810962,0.00016947639,0.00014465259,6.8215398e-9],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000098338096,0.000039496077,0.04346776,0.000018095649,0.0002704995,2.8983665e-8,0.00014368205,0.00023185478,0.9533118,0.001647003,0.000016390528,0.00075507106],"study_design_scores_gemma":[0.00048522116,0.0007529631,0.9855931,0.000029955023,0.0002971233,0.000009316579,0.0005697145,0.0054204916,0.001034885,0.0025599564,0.0030421135,0.00020518307],"about_ca_topic_score_codex":0.00005400272,"about_ca_topic_score_gemma":0.0002181728,"teacher_disagreement_score":0.9522769,"about_ca_system_score_codex":0.0000094952,"about_ca_system_score_gemma":0.000029285318,"threshold_uncertainty_score":0.4700265},"labels":[],"label_agreement":null},{"id":"W2124112870","doi":"10.1107/s1744309104026739","title":"Crystallization and preliminary X-ray analysis of the GST-fused human Bri3 N-terminal domain","year":2004,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Radiopharmaceutical Chemistry and Applications","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Crystallization; Ammonium sulfate; Polyproline helix; Crystallography; Chemistry; Protein crystallization; Tris; Molecule; Peptide; Biochemistry; Chromatography; Organic chemistry","score_opus":0.019828973188911077,"score_gpt":0.31428319414579725,"score_spread":0.29445422095688617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124112870","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99014246,0.0005658902,0.0050394395,0.0031566748,0.00003825565,0.00054970005,0.000077017416,0.000081001956,0.000349538],"genre_scores_gemma":[0.99648136,0.000588095,0.001732226,0.00029673887,0.000040135015,0.000060558265,0.0007561767,0.000015411542,0.00002928298],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986144,0.00016075649,0.0005292064,0.00036877507,0.00012732283,0.00019959778],"domain_scores_gemma":[0.99830395,0.00012298967,0.00031530048,0.00089871185,0.00022090715,0.00013816016],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016772452,0.00021950944,0.00036095042,0.00030992317,0.0009380584,0.000040272975,0.00031380294,0.00027616695,0.000050182676],"category_scores_gemma":[0.00006302565,0.00017430025,0.00017687246,0.0017303191,0.0013427001,0.00014862807,0.0002181143,0.0003469473,4.7183452e-8],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009157308,0.00012723265,0.03746271,0.000085994456,0.0006679382,5.464006e-7,0.00042554867,0.0002764832,0.9421482,0.018476821,0.000013776267,0.00022316206],"study_design_scores_gemma":[0.0034089196,0.00062514405,0.9433178,0.00015718323,0.0040014274,0.00029443324,0.0008150034,0.002731807,0.0020703117,0.02449468,0.017485006,0.00059833797],"about_ca_topic_score_codex":0.000056776422,"about_ca_topic_score_gemma":0.00007846964,"teacher_disagreement_score":0.9400779,"about_ca_system_score_codex":0.00004567882,"about_ca_system_score_gemma":0.000053119056,"threshold_uncertainty_score":0.7214882},"labels":[],"label_agreement":null},{"id":"W2132691017","doi":"10.1107/s1744309113012931","title":"Structure of PatF from<i>Prochloron didemni</i>","year":2013,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Discovery Centre","funders":"Biotechnology and Biological Sciences Research Council; University of St Andrews; Leverhulme Trust; Diamond Light Source; Wellcome Trust","keywords":"Prenylation; Biochemistry; Homology (biology); Biology; Chemistry; Enzyme; Homology modeling; Gene","score_opus":0.0074230972140595505,"score_gpt":0.24089571171769877,"score_spread":0.23347261450363924,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2132691017","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922625,0.0006317277,0.0057149767,0.0004497061,0.00013678546,0.00034549338,0.00018059404,0.000036494777,0.000241754],"genre_scores_gemma":[0.99447095,0.0016926714,0.0018873229,0.00023917173,0.00007406671,0.000037671245,0.0015541773,0.00001875643,0.000025238001],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989019,0.0001269921,0.00035229913,0.00034726804,0.000076413846,0.00019511033],"domain_scores_gemma":[0.9986038,0.0000498276,0.00024998467,0.0007523186,0.00025397344,0.000090078414],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005475536,0.00020110395,0.00020441758,0.00009972894,0.00029490725,0.000031960022,0.00043143894,0.0003327693,0.00016292105],"category_scores_gemma":[0.00007975226,0.0001780681,0.000075370546,0.0002345293,0.000406903,0.00003066842,0.0002894549,0.00016114369,1.8961005e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022413844,0.000018252795,0.0038086853,0.000013295301,0.00007514693,2.9395899e-8,0.00006751997,0.0000056198946,0.9938561,0.001351242,0.00005398684,0.0007277415],"study_design_scores_gemma":[0.0024567372,0.0013692738,0.072631985,0.000097609256,0.0002772275,0.00009897634,0.0014879166,0.0017994209,0.6494446,0.17348918,0.09527249,0.0015746228],"about_ca_topic_score_codex":0.00030183332,"about_ca_topic_score_gemma":0.0003102429,"teacher_disagreement_score":0.3444115,"about_ca_system_score_codex":0.0000070490137,"about_ca_system_score_gemma":0.00003495451,"threshold_uncertainty_score":0.7261407},"labels":[],"label_agreement":null},{"id":"W2135115458","doi":"10.1107/s1744309110011875","title":"Dramatic improvement of crystal quality for low-temperature-grown rabbit muscle aldolase","year":2010,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"National Institutes of Health","keywords":"Aldolase A; Rabbit (cipher); Crystal (programming language); Materials science; Quality (philosophy); Biophysics; Chemistry; Crystallography; Biochemistry; Biology; Enzyme; Computer science; Physics","score_opus":0.01325393710089106,"score_gpt":0.2822739838501279,"score_spread":0.26902004674923685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135115458","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932083,0.00011150348,0.0037686257,0.0006852182,0.0008656286,0.0007167101,0.00029889683,0.0001400401,0.0002050601],"genre_scores_gemma":[0.99385357,0.00013142213,0.0046644197,0.00017628835,0.00015611763,0.00013617164,0.00082416413,0.00002310944,0.00003473825],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981132,0.00020310994,0.0007743731,0.0004542502,0.00014961054,0.00030541513],"domain_scores_gemma":[0.99744165,0.00039246283,0.000542,0.0010236421,0.0004783047,0.000121958685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005637176,0.0002747005,0.00036675195,0.000241167,0.00088922324,0.00009365926,0.00052131136,0.0004229628,0.0002610631],"category_scores_gemma":[0.00027488632,0.00024001517,0.00015312077,0.0004383921,0.0008504733,0.00039754235,0.00019746218,0.00039478918,2.409957e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007290038,0.00004617708,0.0009147771,0.00009947103,0.000037039452,6.088102e-8,0.00023541991,0.000012415939,0.98551255,0.012500567,0.00008033342,0.000488298],"study_design_scores_gemma":[0.009655498,0.0031229414,0.21782148,0.00021460999,0.000752831,0.00018675982,0.0035954665,0.002841166,0.50364673,0.16482893,0.089893624,0.003439955],"about_ca_topic_score_codex":0.00012415188,"about_ca_topic_score_gemma":0.0009306224,"teacher_disagreement_score":0.4818658,"about_ca_system_score_codex":0.000020831369,"about_ca_system_score_gemma":0.00006309573,"threshold_uncertainty_score":0.97875345},"labels":[],"label_agreement":null},{"id":"W2146045966","doi":"10.1107/s1744309106005847","title":"Structure of the conserved hypothetical protein MAL13P1.257 from<i>Plasmodium falciparum</i>","year":2006,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium","funders":"National Institute of General Medical Sciences","keywords":"Plasmodium falciparum; Biology; Computational biology; Virology; Malaria; Immunology","score_opus":0.010076274037096346,"score_gpt":0.2321722700057268,"score_spread":0.22209599596863044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146045966","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945699,0.0006225865,0.0022481824,0.0012457313,0.00014842923,0.0005201732,0.00030130622,0.00003278559,0.00031088284],"genre_scores_gemma":[0.9962596,0.00015511872,0.0024645694,0.00014002399,0.00010138182,0.000037149908,0.00073477067,0.000021637317,0.00008569455],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984159,0.00046870092,0.00042472826,0.0003647559,0.000111197056,0.00021475932],"domain_scores_gemma":[0.9983625,0.000068033565,0.00030637693,0.0010393459,0.00017065849,0.000053117143],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001024339,0.00022984314,0.00021571011,0.000078909696,0.00052858825,0.000035610326,0.00062615785,0.00042995927,0.0000693944],"category_scores_gemma":[0.0000839178,0.00017525347,0.000132911,0.00029136622,0.0008395405,0.000016433114,0.000338689,0.00019926911,1.0390147e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006277615,0.00002455488,0.009454747,0.000009917444,0.000060306542,6.0135626e-8,0.000020193122,0.00001826817,0.9828233,0.0073086536,0.00008364409,0.00013355444],"study_design_scores_gemma":[0.0016766938,0.00045139945,0.09666667,0.000079969024,0.00019084202,0.00006778187,0.00023188752,0.00035410956,0.7114395,0.11111653,0.07685371,0.0008708928],"about_ca_topic_score_codex":0.0002630121,"about_ca_topic_score_gemma":0.00089955336,"teacher_disagreement_score":0.2713838,"about_ca_system_score_codex":0.0000096526055,"about_ca_system_score_gemma":0.000049628303,"threshold_uncertainty_score":0.7146629},"labels":[],"label_agreement":null},{"id":"W2151893391","doi":"10.1107/s1744309110049390","title":"Structure of the catalytic domain of glucoamylase from<i>Aspergillus niger</i>","year":2011,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Basic Energy Sciences; Canadian Institutes of Health Research; Office of Science; Michael Smith Health Research BC; U.S. Department of Energy","keywords":"Aspergillus niger; Subtilisin; Chemistry; Glycerol; Linker; Enzyme; Active site; Biochemistry; Cleavage (geology); Catalysis; Starch; Gene isoform; Binding site; Stereochemistry; Biology","score_opus":0.011922435169973718,"score_gpt":0.23309306337715757,"score_spread":0.22117062820718386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2151893391","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99706584,0.0004191996,0.0012797621,0.00025509883,0.00023204973,0.00022982432,0.00025558568,0.000017685712,0.0002449647],"genre_scores_gemma":[0.9968719,0.0006251856,0.00120546,0.000099472374,0.00005782633,0.000007810674,0.0010933506,0.000014191697,0.000024833851],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99888647,0.00023530217,0.00040295435,0.0002725112,0.000078476,0.00012428753],"domain_scores_gemma":[0.9983631,0.000023091896,0.00040004007,0.0009399837,0.00022778151,0.00004601249],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007471537,0.00016009936,0.00017600825,0.00009522707,0.00026724918,0.0000080864265,0.0004570616,0.00025222282,0.00007909312],"category_scores_gemma":[0.00006081014,0.00012555765,0.00009458507,0.00033659913,0.00077177206,0.000021561642,0.00027101627,0.00014871231,4.7862795e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006016068,0.000028599854,0.036701556,0.0000136260705,0.00008673533,2.4431968e-8,0.00038142045,0.0000048209695,0.9608389,0.001694381,0.000030857667,0.0001589265],"study_design_scores_gemma":[0.0014809263,0.00047755134,0.47814634,0.00005421764,0.00020597914,0.000058621205,0.0012186359,0.00013509035,0.4708811,0.021914592,0.024782827,0.00064408226],"about_ca_topic_score_codex":0.00012841383,"about_ca_topic_score_gemma":0.00039869337,"teacher_disagreement_score":0.48995778,"about_ca_system_score_codex":0.0000072573944,"about_ca_system_score_gemma":0.00003960968,"threshold_uncertainty_score":0.5120092},"labels":[],"label_agreement":null},{"id":"W2153652415","doi":"10.1107/s1744309112023597","title":"Two crystal forms of a helix-rich fatty acid- and retinol-binding protein, Na-FAR-1, from the parasitic nematode<i>Necator americanus</i>","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Trypanosoma species research and implications","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; Consejo Nacional de Investigaciones Científicas y Técnicas; Diamond Light Source; Wellcome Trust","keywords":"Nematode; Necator americanus; Crystal twinning; Crystallography; Crystal (programming language); Biology; Crystal structure; Retinol binding protein; Biochemistry; Chemistry; Retinol; Zoology; Vitamin; Ecology; Helminths","score_opus":0.022069855081527194,"score_gpt":0.3084779263069477,"score_spread":0.2864080712254205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153652415","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99041265,0.002077708,0.0020456805,0.00357492,0.000063723965,0.0010394349,0.00024265493,0.000104842125,0.0004384089],"genre_scores_gemma":[0.99387425,0.001887755,0.002536568,0.00027176525,0.00010255869,0.0001997725,0.0010734955,0.000026781923,0.00002703196],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980695,0.00034411662,0.0005825384,0.00034329155,0.00020682551,0.00045369565],"domain_scores_gemma":[0.9974758,0.00048364524,0.00037279152,0.00109146,0.00030437825,0.00027194977],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013808931,0.0002728945,0.0004017032,0.0002293111,0.001032991,0.00006376427,0.00039286,0.00021360496,0.00009248647],"category_scores_gemma":[0.00032503522,0.00019662803,0.00010910177,0.00092377927,0.0015292211,0.0004124768,0.00028578413,0.00050705386,5.22342e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008374995,0.00007270754,0.14305188,0.00003285541,0.0001694946,1.6932718e-7,0.00040589029,4.4760688e-7,0.8470479,0.00853143,0.000059712514,0.0005437497],"study_design_scores_gemma":[0.0020358334,0.0005343443,0.9650349,0.00012903332,0.00031934967,0.00031274935,0.0038412036,0.00036482545,0.008233577,0.004907796,0.013778646,0.00050775305],"about_ca_topic_score_codex":0.0002110243,"about_ca_topic_score_gemma":0.00018995641,"teacher_disagreement_score":0.8388143,"about_ca_system_score_codex":0.00004726971,"about_ca_system_score_gemma":0.00007821427,"threshold_uncertainty_score":0.8018258},"labels":[],"label_agreement":null},{"id":"W2154163821","doi":"10.1107/s1744309110027600","title":"A new crystal form of Lys48-linked diubiquitin","year":2010,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Medical Research Council; European Synchrotron Radiation Facility; Wellcome Trust","keywords":"Materials science","score_opus":0.01273568667362842,"score_gpt":0.26813436488714815,"score_spread":0.25539867821351975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154163821","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98875934,0.00038152977,0.007852627,0.0007256555,0.00028102956,0.00040527087,0.00010024852,0.00006506007,0.0014292644],"genre_scores_gemma":[0.990072,0.0007388677,0.007529253,0.00012984629,0.00021587829,0.00003768688,0.0011260998,0.000024151142,0.00012622654],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986826,0.00015156182,0.00044861142,0.00036962004,0.00009551519,0.00025209336],"domain_scores_gemma":[0.99830276,0.000065041895,0.00029614154,0.0009445535,0.0002346381,0.00015685792],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022079566,0.0002331394,0.00022925717,0.00019072263,0.00042429616,0.00003686662,0.00053194223,0.0004746735,0.0001486931],"category_scores_gemma":[0.00015740933,0.00022188874,0.00012864285,0.00035903542,0.0005601332,0.000028786637,0.00035466577,0.00036599403,1.982151e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000063839536,0.000022921377,0.012254677,0.000018161356,0.000073183044,9.269803e-8,0.00016261855,0.00000175448,0.97727764,0.0084132645,0.00018006575,0.0015317707],"study_design_scores_gemma":[0.0046573444,0.0021676647,0.14612046,0.000080586164,0.00028396607,0.00047289007,0.0010311916,0.00087263633,0.08433242,0.07174267,0.68624175,0.001996455],"about_ca_topic_score_codex":0.00010042374,"about_ca_topic_score_gemma":0.000944881,"teacher_disagreement_score":0.89294523,"about_ca_system_score_codex":0.0000060212496,"about_ca_system_score_gemma":0.00010315018,"threshold_uncertainty_score":0.90483606},"labels":[],"label_agreement":null},{"id":"W2163995692","doi":"10.1107/s1744309110040546","title":"Crystallization and preliminary diffraction analysis of Wzi, a member of the capsule export and assembly pathway in<i>Escherichia coli</i>","year":2010,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Wellcome Trust","keywords":"Crystallization; Escherichia coli; Capsule; Diffraction; Crystallography; Materials science; Chemical engineering; Chemistry; Biology; Biochemistry; Physics; Gene; Optics; Engineering; Botany","score_opus":0.012011318713212708,"score_gpt":0.2539798082481938,"score_spread":0.24196848953498107,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2163995692","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99747354,0.00027032543,0.0010312363,0.0003084922,0.00026357264,0.00033868794,0.00007152756,0.000035307912,0.0002073133],"genre_scores_gemma":[0.9981367,0.0005534224,0.0009844097,0.000064423024,0.000024386647,0.000032601314,0.00017589836,0.000012073079,0.000016088057],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99846864,0.00030311997,0.0005793521,0.00034650264,0.00013401965,0.00016835162],"domain_scores_gemma":[0.9983187,0.00019064895,0.00054752856,0.00064884534,0.00023256594,0.000061753606],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034744333,0.00019580139,0.0003496756,0.0004115505,0.0004055853,0.00003847397,0.0002571189,0.00032380398,0.00006307129],"category_scores_gemma":[0.00013748878,0.00015384916,0.00007991258,0.0013289888,0.000886684,0.000363595,0.00023719735,0.00032598383,1.9077975e-8],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004581087,0.000030382997,0.063450366,0.00003267453,0.000081598824,7.2547365e-8,0.0005076346,0.00006235238,0.9319144,0.0037070038,0.0000062058525,0.0001615152],"study_design_scores_gemma":[0.00046379323,0.00014895108,0.97997546,0.000022750724,0.0003110518,0.000018610932,0.0004868062,0.003363163,0.011079676,0.002484721,0.0014328416,0.00021218181],"about_ca_topic_score_codex":0.00029580644,"about_ca_topic_score_gemma":0.0023590764,"teacher_disagreement_score":0.9208347,"about_ca_system_score_codex":0.000013322863,"about_ca_system_score_gemma":0.000041505846,"threshold_uncertainty_score":0.6273787},"labels":[],"label_agreement":null},{"id":"W2322416452","doi":"10.1107/s1744309110011851","title":"Expression, purification, crystallization and preliminary X-ray analysis of<i>Pseudomonas aeruginosa</i>AlgX","year":2010,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"National Institute of Biomedical Imaging and Bioengineering; National Institute of General Medical Sciences; Canadian Institutes of Health Research","keywords":"Azotobacter vinelandii; Periplasmic space; Crystallization; Diffraction; Crystallography; Pseudomonas aeruginosa; Materials science; Diffusion; Molecule; Chemistry; Bacteria; Escherichia coli; Optics; Physics; Biology; Biochemistry; Nitrogen; Gene; Organic chemistry","score_opus":0.008792603633348564,"score_gpt":0.2502407942191249,"score_spread":0.24144819058577632,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2322416452","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99308527,0.000525367,0.004892089,0.00059549324,0.00021142417,0.00032587574,0.00012504995,0.00005100531,0.00018841239],"genre_scores_gemma":[0.9880614,0.0017766847,0.0065567708,0.00011066232,0.0000958985,0.0000294538,0.0033140748,0.000021761454,0.000033268352],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983708,0.00024270735,0.0005412644,0.000518221,0.00010102962,0.000225923],"domain_scores_gemma":[0.9980016,0.0000903057,0.00040983208,0.0009926158,0.00037962262,0.0001260265],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00025495907,0.00025976103,0.0003164399,0.00043785156,0.00062105636,0.00006410504,0.00033065837,0.00049739785,0.000042387106],"category_scores_gemma":[0.00015728941,0.00024574212,0.0001257287,0.00087207893,0.00085326826,0.000048311253,0.00030482348,0.00026260677,5.7013075e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008791578,0.0000368159,0.024050506,0.000016004125,0.00028377838,1.0058672e-7,0.00015192007,0.00004176543,0.9724471,0.0023379098,0.00005582435,0.0004903729],"study_design_scores_gemma":[0.0018982902,0.0010082236,0.8224628,0.000054605232,0.0017534012,0.00011314299,0.00090632867,0.004599405,0.055036668,0.0020466093,0.10861832,0.0015022025],"about_ca_topic_score_codex":0.00006413658,"about_ca_topic_score_gemma":0.00037015698,"teacher_disagreement_score":0.91741043,"about_ca_system_score_codex":0.0000058517135,"about_ca_system_score_gemma":0.00004168118,"threshold_uncertainty_score":0.99999946},"labels":[],"label_agreement":null},{"id":"W2322611310","doi":"10.1107/s174430910901094x","title":"Expression, refolding, crystallization and preliminary X-ray analysis of<i>Pseudomonas aeruginosa</i>AlgE","year":2009,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Phytochemistry and Bioactivity Studies","field":"Pharmacology, Toxicology and Pharmaceutics","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Hospital for Sick Children; Sick Kids Foundation","keywords":"Crystallization; Pseudomonas aeruginosa; Chemistry; Crystallography; Diffraction; Molecule; Strain (injury); X-ray crystallography; Chromatography; Bacteria; Biology; Physics; Organic chemistry; Optics","score_opus":0.04699918385352241,"score_gpt":0.37276799297211155,"score_spread":0.32576880911858913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2322611310","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98990315,0.0024746584,0.0034694222,0.0022027201,0.00016018019,0.0004491248,0.00018798611,0.00016775167,0.0009850299],"genre_scores_gemma":[0.9914661,0.0059586302,0.0011591263,0.00041007355,0.00006270067,0.00003902826,0.0008440822,0.000011537316,0.00004873161],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9978823,0.0005839257,0.0006015719,0.0004993849,0.00012055117,0.0003122454],"domain_scores_gemma":[0.9979707,0.0004749584,0.0004838261,0.0006197264,0.00028471922,0.00016608488],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003758375,0.00032627245,0.0005068938,0.0005292058,0.001105373,0.000036260608,0.00039317124,0.0005683567,0.00010342584],"category_scores_gemma":[0.00015212437,0.00029943444,0.0001568349,0.0014404284,0.0010172586,0.00033484763,0.0002512511,0.000538799,8.2581e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026838903,0.00014464637,0.033864316,0.000034922694,0.0008246833,7.236056e-7,0.000694201,0.0002144351,0.95875734,0.0033138248,0.00014370716,0.001738786],"study_design_scores_gemma":[0.003138447,0.0015814798,0.84147334,0.00010978217,0.005145187,0.00009185256,0.001733492,0.015506023,0.022955302,0.017429644,0.08917793,0.0016575488],"about_ca_topic_score_codex":0.000021710051,"about_ca_topic_score_gemma":0.000046064735,"teacher_disagreement_score":0.93580204,"about_ca_system_score_codex":0.00003039128,"about_ca_system_score_gemma":0.000030080468,"threshold_uncertainty_score":0.99994576},"labels":[],"label_agreement":null},{"id":"W2412324688","doi":"10.1107/s1744309113018927","title":"Cloning, expression, purification and preliminary X-ray diffraction studies of a novel AB<sub>5</sub>toxin","year":2013,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Health and Medical Research Council; Australian Research Council; Medical Research Council; Australian Synchrotron; Pfizer","keywords":"Escherichia coli; Protein subunit; Citrobacter freundii; Toxin; Biology; Virulence factor; Cloning (programming); Serine protease; Microbiology; Molecular biology; Chemistry; Virulence; Protease; Biochemistry; Enzyme; Enterobacteriaceae; Gene","score_opus":0.016125300653005006,"score_gpt":0.2654732795221569,"score_spread":0.2493479788691519,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412324688","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99279654,0.0025653099,0.00284021,0.0010690477,0.00015395376,0.0004683778,0.000035186327,0.000043639928,0.000027753833],"genre_scores_gemma":[0.9789336,0.017168041,0.0030241958,0.000086759545,0.00007158873,0.00010523621,0.0005802018,0.0000183567,0.000012039957],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987021,0.00016600348,0.0004545166,0.0004139714,0.00006781888,0.00019560699],"domain_scores_gemma":[0.99844533,0.0000685981,0.0003821202,0.00066282455,0.0003700407,0.000071100076],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001452563,0.00022272671,0.00024105854,0.00019925536,0.00044634286,0.00003617683,0.00026451977,0.0004955708,0.0000069948596],"category_scores_gemma":[0.00015240369,0.00019886036,0.00005967277,0.00027230094,0.0009315676,0.000038848422,0.00037613706,0.00019835048,1.0788058e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006163665,0.000051909297,0.002672192,0.000030369416,0.00010091412,3.1803378e-8,0.00009466612,0.000015466097,0.99476385,0.00056075474,0.00009692991,0.0015512748],"study_design_scores_gemma":[0.0028920386,0.0026732113,0.49635318,0.00015691016,0.0002542471,0.0001728222,0.0022941115,0.0023753874,0.45401868,0.005142827,0.03240881,0.0012577617],"about_ca_topic_score_codex":0.000027578782,"about_ca_topic_score_gemma":0.000053444932,"teacher_disagreement_score":0.5407452,"about_ca_system_score_codex":0.000010599501,"about_ca_system_score_gemma":0.000024093231,"threshold_uncertainty_score":0.81092906},"labels":[],"label_agreement":null},{"id":"W4233767182","doi":"10.1107/s1744309112012808","title":"Expression, purification, crystallization and preliminary X-ray analysis of<i>Pseudomonas aeruginosa</i>AlgL","year":2012,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"National Center for Research Resources; Canadian Institutes of Health Research; National Institutes of Health; U.S. Department of Energy","keywords":"Periplasmic space; Crystallization; Pseudomonas aeruginosa; Chemistry; Crystallography; Diffraction; Molecule; Bacteria; Escherichia coli; Materials science; Physics; Biology; Biochemistry; Organic chemistry; Optics; Gene","score_opus":0.012029807009896587,"score_gpt":0.256858740378656,"score_spread":0.24482893336875944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4233767182","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98832524,0.002504715,0.007914486,0.0004176959,0.0001767712,0.00032731425,0.000106780484,0.00004812212,0.00017884957],"genre_scores_gemma":[0.9883097,0.0034487594,0.00477474,0.00012198679,0.000120319564,0.000030491801,0.003143071,0.00002175082,0.000029179319],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983202,0.00035411978,0.00053257047,0.0003990986,0.00010186986,0.00029214818],"domain_scores_gemma":[0.9982378,0.00008710532,0.0004055798,0.00082685926,0.0002875154,0.0001551489],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029740552,0.00025809545,0.0003193552,0.0004163886,0.000574298,0.00004503863,0.00026198564,0.00040607186,0.000031893756],"category_scores_gemma":[0.00011782084,0.00024322733,0.00012406752,0.0008849855,0.0006312169,0.000072826195,0.0003057119,0.00015620842,7.1769676e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000084842286,0.00004937127,0.06660007,0.000018819303,0.00034159087,4.0717953e-8,0.00026027008,0.000045942765,0.93028724,0.0018525086,0.000071385126,0.0003879428],"study_design_scores_gemma":[0.0011340113,0.0005972983,0.885275,0.000049680344,0.00146218,0.00006324332,0.0009470235,0.0014773163,0.025409607,0.0005449874,0.08203582,0.0010038285],"about_ca_topic_score_codex":0.00004141061,"about_ca_topic_score_gemma":0.0000625833,"teacher_disagreement_score":0.9048776,"about_ca_system_score_codex":0.0000113076085,"about_ca_system_score_gemma":0.000028020177,"threshold_uncertainty_score":0.9918523},"labels":[],"label_agreement":null},{"id":"W4237684398","doi":"10.1107/s1744309108014656","title":"Expression, purification and preliminary diffraction studies of PhnP","year":2008,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Pesticide and Herbicide Environmental Studies","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Escherichia coli; Operon; Diffraction; Phosphonate; Crystallography; Chemistry; Bacteria; Biochemistry; Biology; Gene; Genetics; Physics; Optics","score_opus":0.029958134629409508,"score_gpt":0.28138398152301497,"score_spread":0.2514258468936055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237684398","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99542713,0.0021947138,0.00078491494,0.00072768657,0.000069799295,0.00025048663,0.000013645635,0.000054817556,0.0004767801],"genre_scores_gemma":[0.98243874,0.015088336,0.0021634994,0.00007730219,0.000021169511,0.000052124014,0.00009716025,0.000009705925,0.000051931016],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99891275,0.00017384213,0.00035691622,0.00029987228,0.000106916355,0.00014970433],"domain_scores_gemma":[0.9990267,0.00020548337,0.00025978163,0.00041043383,0.000035256857,0.000062322026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000119391385,0.0001688266,0.00021622218,0.00009264534,0.0010397409,0.00000850621,0.00018651303,0.00013841403,0.00016145836],"category_scores_gemma":[0.00008961809,0.00014656963,0.000041005405,0.0002869665,0.0020841118,0.00034711292,0.0004347877,0.00016123494,4.3608537e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051540275,0.00004841121,0.31110907,0.000019371668,0.000063038475,3.6229017e-7,0.0012584362,0.00004491036,0.68570846,0.0004685095,0.00025742382,0.0009704433],"study_design_scores_gemma":[0.00031976166,0.00021545903,0.98419505,0.000020291875,0.000051966766,0.00008106602,0.0009143456,0.0003055039,0.00068844523,0.0055055376,0.0074991123,0.00020347568],"about_ca_topic_score_codex":0.00010577382,"about_ca_topic_score_gemma":0.000096125405,"teacher_disagreement_score":0.68502,"about_ca_system_score_codex":0.000036849156,"about_ca_system_score_gemma":0.0000046597706,"threshold_uncertainty_score":0.79969513},"labels":[],"label_agreement":null},{"id":"W4255827122","doi":"10.1107/s1744309105001545","title":"MdaB from<i>Escherichia coli</i>: cloning, purification, crystallization and preliminary X-ray analysis","year":2005,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Bioactive Compounds and Antitumor Agents","field":"Pharmacology, Toxicology and Pharmaceutics","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; Queen's University","funders":"","keywords":"Escherichia coli; Crystallization; Molecular biology; Triclinic crystal system; Gene; Cloning (programming); Chemistry; Biology; Crystallography; Biochemistry; Crystal structure","score_opus":0.04772748760167069,"score_gpt":0.3605904785906872,"score_spread":0.31286299098901654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255827122","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9746994,0.0029273992,0.015723065,0.004425735,0.0002905936,0.000573573,0.00028676967,0.00025972468,0.0008137899],"genre_scores_gemma":[0.9838031,0.0065848,0.0055658207,0.0010758007,0.00020913436,0.00009834679,0.002481362,0.000029639436,0.0001519864],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9972542,0.0008754002,0.00067197374,0.0006789816,0.00013410792,0.00038532456],"domain_scores_gemma":[0.9977849,0.0004351206,0.0004624309,0.00072653574,0.00033233056,0.00025865415],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.0003783157,0.0003882832,0.00042962912,0.00049745466,0.0016603856,0.0001271924,0.0005219861,0.00063095614,0.00060466037],"category_scores_gemma":[0.00009357245,0.00038178888,0.00015230598,0.0012605132,0.0010936161,0.0005225285,0.0003182947,0.0006752903,0.0000013544253],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036670573,0.00030793223,0.22860368,0.000037877027,0.0022325702,0.000001328679,0.0016088171,0.0009186352,0.74884576,0.011608342,0.00076387293,0.004704491],"study_design_scores_gemma":[0.0017372635,0.0002983348,0.5083167,0.000021423368,0.0018082801,0.000016860304,0.0006539003,0.045609087,0.000648564,0.003671307,0.43635923,0.0008590295],"about_ca_topic_score_codex":0.00013617492,"about_ca_topic_score_gemma":0.00044874538,"teacher_disagreement_score":0.7481972,"about_ca_system_score_codex":0.00005868946,"about_ca_system_score_gemma":0.00004703292,"threshold_uncertainty_score":0.9998634},"labels":[],"label_agreement":null}]}